Psyllid ID: psy17489

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------
Protein Sequence
MEHPPGTSLFGGLLDTALPESPIMQEEQKVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccHHHHccccEEEEEccccHHHHHHHHHHHHHcccccEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHcccccccEEEEEcccccccccccHHHHHHHHccccEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEc
Secondary Structure Prediction (SSPRO)
ccccccHHHccccccccccccccccccccHHHHHcccEEEEEccccHHHHHHHHHHHHHcccccEEEEEEEccccccHHHHHHHHHccHHHHHHHHHcccHHcEEEEEccccccccccccHHHHHHHHHHcEEEEEEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEc
Coil and Loop (DISEMBL)
mehppgtslfgglldtalpespimqeeqkvddfyrdgqilvtggtgfMGKLLIDKLLRSFPDIGAIYIMVrdkkgsspeERVKNMLNSVIFDRlnkevpdfrskiqvipsnlesehlglsedSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL
Flexible Loop (DISEMBL)
mehppgtslfggllDTALPESPIMQEEQKVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVrdkkgsspeerVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL
Low Complexity Region (SEG)
MEHPPGTSLFGGLLDTALPESPIMQEEQKVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL
Disordered region (IsUnstruct)
*****************************VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR*************MLNSVIFDRLNKEVPDFRSKIQVI*****************LIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFC**
Disordered Region (DISOPRED)
********************************FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL
Disordered Region (DISEMBL)
MEHPPGTSLFGGLLDTALPESPIMQEEQKVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL
Disordered Region (DISPRO)
**************************EQKVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEHPPGTSLFGGLLDTALPESPIMQEEQKVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	177	2.2.26 [Sep-21-2011]
Q922J9	515	Fatty acyl-CoA reductase	yes	N/A	0.836	0.287	0.459	1e-35
Q66H50	515	Fatty acyl-CoA reductase	yes	N/A	0.836	0.287	0.452	4e-35
Q5R834	515	Fatty acyl-CoA reductase	yes	N/A	0.836	0.287	0.452	4e-35
Q8WVX9	515	Fatty acyl-CoA reductase	yes	N/A	0.836	0.287	0.452	5e-35
Q5ZM72	515	Fatty acyl-CoA reductase	no	N/A	0.836	0.287	0.445	3e-34
Q7ZXF5	515	Fatty acyl-CoA reductase	N/A	N/A	0.836	0.287	0.412	4e-31
Q7TNT2	515	Fatty acyl-CoA reductase	no	N/A	0.836	0.287	0.398	1e-28
Q0P5J1	515	Fatty acyl-CoA reductase	no	N/A	0.836	0.287	0.385	1e-28
Q96K12	515	Fatty acyl-CoA reductase	no	N/A	0.836	0.287	0.391	2e-28
A1ZAI5	625	Putative fatty acyl-CoA r	no	N/A	0.887	0.251	0.368	5e-27

>sp|Q922J9|FACR1_MOUSE Fatty acyl-CoA reductase 1 OS=Mus musculus GN=Far1 PE=1 SV=1

 Score =  149 bits (375), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 68/148 (45%), Positives = 106/148 (71%)

Query: 30  VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSV 89
           + ++Y    IL+TG TGF+GK+L++KLLRS P + ++Y++VR K G +P+ERV+ +L+S 
Sbjct: 4   IPEYYEGKNILLTGATGFLGKVLLEKLLRSCPRVNSVYVLVRQKAGQTPQERVEEILSSK 63

Query: 90  IFDRLNKEVPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQK 149
           +FDRL  E PDFR KI  I S L    L LSE+ +++I    N+IFHCAA++RF+E L+ 
Sbjct: 64  LFDRLRDENPDFREKIIAINSELTQPKLALSEEDKEIIIDSTNVIFHCAATVRFNENLRD 123

Query: 150 AIRANLYATKQMLNLAKECVNLKRFCEL 177
           A++ N+ AT+Q++ LA++  NL+ F  +
Sbjct: 124 AVQLNVIATRQLILLAQQMKNLEVFMHV 151

Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.
Mus musculus (taxid: 10090)
EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: nEC: 2

>sp|Q66H50|FACR1_RAT Fatty acyl-CoA reductase 1 OS=Rattus norvegicus GN=Far1 PE=2 SV=1

 Score =  147 bits (371), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 67/148 (45%), Positives = 105/148 (70%)

Query: 30  VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSV 89
           + ++Y    IL+TG TGF+GK+L++KLLRS P + ++Y++VR K G +P+ERV+ +L+  
Sbjct: 4   IPEYYEGKNILLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEILSGK 63

Query: 90  IFDRLNKEVPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQK 149
           +FDRL  E PDFR KI  I S L    L LSE+ +++I    N+IFHCAA++RF+E L+ 
Sbjct: 64  LFDRLRDENPDFRQKIIAINSELTQPKLALSEEDKEIIIDSTNVIFHCAATVRFNENLRD 123

Query: 150 AIRANLYATKQMLNLAKECVNLKRFCEL 177
           A++ N+ AT+Q++ LA++  NL+ F  +
Sbjct: 124 AVQLNVIATRQLILLAQQMKNLEVFMHV 151

Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|Q5R834|FACR1_PONAB Fatty acyl-CoA reductase 1 OS=Pongo abelii GN=FAR1 PE=2 SV=1

 Score =  147 bits (370), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 67/148 (45%), Positives = 105/148 (70%)

Query: 30  VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSV 89
           + ++Y    +L+TG TGF+GK+L++KLLRS P + ++Y++VR K G +P+ERV+ +L+  
Sbjct: 4   IPEYYEGKNVLLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVLSGK 63

Query: 90  IFDRLNKEVPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQK 149
           +FDRL  E PDFR KI  I S L    L LSE+ +++I    NIIFHCAA++RF+E L+ 
Sbjct: 64  LFDRLRDENPDFREKIIAINSELTQPKLALSEEDKEVIIESTNIIFHCAATVRFNENLRD 123

Query: 150 AIRANLYATKQMLNLAKECVNLKRFCEL 177
           A++ N+ AT+Q++ LA++  NL+ F  +
Sbjct: 124 AVQLNVIATRQLILLAQQMKNLEVFMHV 151

Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|Q8WVX9|FACR1_HUMAN Fatty acyl-CoA reductase 1 OS=Homo sapiens GN=FAR1 PE=1 SV=1

 Score =  147 bits (370), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 67/148 (45%), Positives = 105/148 (70%)

Query: 30  VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSV 89
           + ++Y    +L+TG TGF+GK+L++KLLRS P + ++Y++VR K G +P+ERV+ +L+  
Sbjct: 4   IPEYYEGKNVLLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVLSGK 63

Query: 90  IFDRLNKEVPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQK 149
           +FDRL  E PDFR KI  I S L    L LSE+ +++I    NIIFHCAA++RF+E L+ 
Sbjct: 64  LFDRLRDENPDFREKIIAINSELTQPKLALSEEDKEVIIDSTNIIFHCAATVRFNENLRD 123

Query: 150 AIRANLYATKQMLNLAKECVNLKRFCEL 177
           A++ N+ AT+Q++ LA++  NL+ F  +
Sbjct: 124 AVQLNVIATRQLILLAQQMKNLEVFMHV 151

Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|Q5ZM72|FACR1_CHICK Fatty acyl-CoA reductase 1 OS=Gallus gallus GN=FAR1 PE=2 SV=1

 Score =  144 bits (364), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 66/148 (44%), Positives = 104/148 (70%)

Query: 30  VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSV 89
           + ++Y    +L+TG TGFMGK+L++KLLRS P + A+Y++VR K G +PE R++ + +  
Sbjct: 4   IPEYYEGKNVLLTGATGFMGKVLLEKLLRSCPKVKAVYVLVRPKAGQTPEARIEEITSCK 63

Query: 90  IFDRLNKEVPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQK 149
           +FDRL +E PDF+ KI VI S L    L LS   ++ +   +NIIFHCAA++RF+E L+ 
Sbjct: 64  LFDRLREEQPDFKEKIIVITSELTQPELDLSNPVKEKLIECINIIFHCAATVRFNETLRD 123

Query: 150 AIRANLYATKQMLNLAKECVNLKRFCEL 177
           A++ N+ +TKQ+L+LA++  NL+ F  +
Sbjct: 124 AVQLNVLSTKQLLSLAQQMTNLEVFMHV 151

Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.

Gallus gallus (taxid: 9031)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|Q7ZXF5|FACR1_XENLA Fatty acyl-CoA reductase 1 OS=Xenopus laevis GN=far1 PE=2 SV=1

 Score =  134 bits (336), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 61/148 (41%), Positives = 100/148 (67%)

Query: 30  VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSV 89
           + +FY+   +L+TG TGFMGK+L++KLLRS P+  A+Y++VR K G  P ERV  M++  
Sbjct: 4   IPEFYQGKNVLITGATGFMGKVLLEKLLRSCPNTKAVYVLVRHKAGQKPRERVAEMMSCK 63

Query: 90  IFDRLNKEVPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQK 149
           +FD+L  E PD   K+  I S L    L +S++ +  +   ++I+FHCAA++RF+E+L+ 
Sbjct: 64  LFDKLRDEQPDCAQKVIAISSELTQPELDMSKEDQDTLIDCIDIVFHCAATVRFNESLRD 123

Query: 150 AIRANLYATKQMLNLAKECVNLKRFCEL 177
           A++ N+ AT+Q+L LA++   L+ F  +
Sbjct: 124 AMQLNVIATRQLLYLAQKMKKLEVFIHV 151

Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.

Xenopus laevis (taxid: 8355)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|Q7TNT2|FACR2_MOUSE Fatty acyl-CoA reductase 2 OS=Mus musculus GN=Far2 PE=2 SV=1

 Score =  125 bits (315), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 59/148 (39%), Positives = 98/148 (66%)

Query: 30  VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSV 89
           +  FY +  IL+TG TGF+GK+L++KL R+ P +  IYI+VR K G + +ERV  +LNS 
Sbjct: 4   IAAFYSNKSILITGATGFLGKVLMEKLFRTSPHLKVIYILVRPKSGQTLQERVFQILNSK 63

Query: 90  IFDRLNKEVPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQK 149
           +F+++ +  P+   KI+ I ++L      +S++  Q + S  NIIFHCAA++RFD  L++
Sbjct: 64  LFEKVKEVCPNVHEKIRPISADLNQRDFAISKEDVQELLSCTNIIFHCAATVRFDAHLRE 123

Query: 150 AIRANLYATKQMLNLAKECVNLKRFCEL 177
           A++ N+ AT+Q+L +A +   L+ F  +
Sbjct: 124 AVQLNVTATQQLLLMASQMPKLEAFIHI 151

Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The preferred substrates are C16, C18, C18:1 and C18:2 but low activity can be observed with C10-C14 substrates.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|Q0P5J1|FACR2_BOVIN Fatty acyl-CoA reductase 2 OS=Bos taurus GN=FAR2 PE=2 SV=1

 Score =  125 bits (314), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 57/148 (38%), Positives = 99/148 (66%)

Query: 30  VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSV 89
           +  FY    IL+TG TGFMGK+L++KL R+ PD+  +YI+VR K+G + ++RV  +L+S 
Sbjct: 4   IAAFYGGKSILITGATGFMGKVLMEKLFRTSPDLKVVYILVRPKQGQTLQQRVFQILDSK 63

Query: 90  IFDRLNKEVPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQK 149
           +F+++ +  P+   KI+ I ++L      +S++  + + S  NIIFHCAA++RFD+ L+ 
Sbjct: 64  LFEKVKEVCPNVHEKIRAISADLNQNDFAISKEDMKELLSHTNIIFHCAATVRFDDHLRH 123

Query: 150 AIRANLYATKQMLNLAKECVNLKRFCEL 177
           A++ N+ AT+Q+L +A +   L+ F  +
Sbjct: 124 AVQLNVTATQQLLLMASQMPKLEAFIHI 151

Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The preferred substrates are C16, C18, C18:1 and C18:2 but low activity can be observed with C10-C14 substrates.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|Q96K12|FACR2_HUMAN Fatty acyl-CoA reductase 2 OS=Homo sapiens GN=FAR2 PE=2 SV=1

 Score =  124 bits (312), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 58/148 (39%), Positives = 98/148 (66%)

Query: 30  VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSV 89
           +  FY    IL+TG TGF+GK+L++KL R+ PD+  IYI+VR K G + ++RV  +L+S 
Sbjct: 4   IAAFYGGKSILITGATGFLGKVLMEKLFRTSPDLKVIYILVRPKAGQTLQQRVFQILDSK 63

Query: 90  IFDRLNKEVPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQK 149
           +F+++ +  P+   KI+ I ++L      +S++  Q + S  NIIFHCAA++RFD+ L+ 
Sbjct: 64  LFEKVKEVCPNVHEKIRAIYADLNQNDFAISKEDMQELLSCTNIIFHCAATVRFDDTLRH 123

Query: 150 AIRANLYATKQMLNLAKECVNLKRFCEL 177
           A++ N+ AT+Q+L +A +   L+ F  +
Sbjct: 124 AVQLNVTATRQLLLMASQMPKLEAFIHI 151

Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The preferred substrates are C16, C18, C18:1 and C18:2 but low activity can be observed with C10-C14 substrates.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|A1ZAI5|FACR1_DROME Putative fatty acyl-CoA reductase CG5065 OS=Drosophila melanogaster GN=CG5065 PE=3 SV=1

 Score =  120 bits (301), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 63/171 (36%), Positives = 102/171 (59%), Gaps = 14/171 (8%)

Query: 15  DTALPESP------IMQEEQKVDD--------FYRDGQILVTGGTGFMGKLLIDKLLRSF 60
            TALP  P      +  E  + DD        FY    + +TGGTGFMGK+L++KLLRS 
Sbjct: 90  STALPLPPSSNGLQMPYERFRADDTSYVPIAQFYAGRSVFITGGTGFMGKVLVEKLLRSC 149

Query: 61  PDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLGLS 120
           P+I  IY+++R K+G     R+  +LN+ +F+ L +E P   SK+  I  ++ SE LG+S
Sbjct: 150 PEIRNIYLLIRPKRGQEVSARLTELLNAPLFESLRQEKPKELSKVIPISGDITSEELGIS 209

Query: 121 EDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNL 171
           E  + L+   V+++FH AA+++FDE L+ ++  N+  TK+++ L    ++L
Sbjct: 210 EKDQNLLCRNVSVVFHSAATVKFDEKLKLSVTINMLGTKRLVELCHRMLSL 260

Catalyzes the reduction of saturated fatty acyl-CoA to fatty alcohols.

Drosophila melanogaster (taxid: 7227)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	177
12847146	260	unnamed protein product [Mus musculus]	0.819	0.557	0.468	4e-34
148685105	422	male sterility domain containing 2, isof	0.836	0.350	0.459	5e-34
403254282	515	PREDICTED: fatty acyl-CoA reductase 1 [S	0.836	0.287	0.459	6e-34
354505395	515	PREDICTED: fatty acyl-CoA reductase 1 is	0.836	0.287	0.466	6e-34
68448551	515	fatty acyl-CoA reductase 1 [Mus musculus	0.836	0.287	0.459	6e-34
12852375	520	unnamed protein product [Mus musculus]	0.836	0.284	0.459	7e-34
395815293	515	PREDICTED: fatty acyl-CoA reductase 1 [O	0.836	0.287	0.459	7e-34
26329369	515	unnamed protein product [Mus musculus] g	0.836	0.287	0.459	8e-34
354505397	515	PREDICTED: fatty acyl-CoA reductase 1 is	0.836	0.287	0.466	8e-34
363548370	515	fatty acyl-CoA reductase [Tyto alba]	0.836	0.287	0.466	1e-33

>gi|12847146|dbj|BAB27453.1| unnamed protein product [Mus musculus]

 Score =  149 bits (376), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 68/145 (46%), Positives = 105/145 (72%)

Query: 30  VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSV 89
           + ++Y    IL+TG TGF+GK+L++KLLRS P + ++Y++VR K G +P+ERV+ +L+S 
Sbjct: 4   IPEYYEGKNILLTGATGFLGKVLLEKLLRSCPRVNSVYVLVRQKAGQTPQERVEEILSSK 63

Query: 90  IFDRLNKEVPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQK 149
           +FDRL  E PDFR KI  I S L    L LSE+ +++I    N+IFHCAA++RF+E L+ 
Sbjct: 64  LFDRLRDENPDFREKIIAINSELTQPKLALSEEDKEIIIDSTNVIFHCAATVRFNENLRD 123

Query: 150 AIRANLYATKQMLNLAKECVNLKRF 174
           A++ N+ AT+Q++ LA++  NL+ F
Sbjct: 124 AVQLNVIATRQLILLAQQMKNLEVF 148

Source: Mus musculus

Species: Mus musculus

Genus: Mus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|148685105|gb|EDL17052.1| male sterility domain containing 2, isoform CRA_b [Mus musculus]

 Score =  149 bits (375), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 68/148 (45%), Positives = 106/148 (71%)

Query: 30  VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSV 89
           + ++Y    IL+TG TGF+GK+L++KLLRS P + ++Y++VR K G +P+ERV+ +L+S 
Sbjct: 4   IPEYYEGKNILLTGATGFLGKVLLEKLLRSCPRVNSVYVLVRQKAGQTPQERVEEILSSK 63

Query: 90  IFDRLNKEVPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQK 149
           +FDRL  E PDFR KI  I S L    L LSE+ +++I    N+IFHCAA++RF+E L+ 
Sbjct: 64  LFDRLRDENPDFREKIIAINSELTQPKLALSEEDKEIIIDSTNVIFHCAATVRFNENLRD 123

Query: 150 AIRANLYATKQMLNLAKECVNLKRFCEL 177
           A++ N+ AT+Q++ LA++  NL+ F  +
Sbjct: 124 AVQLNVIATRQLILLAQQMKNLEVFMHV 151

Source: Mus musculus

Species: Mus musculus

Genus: Mus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|403254282|ref|XP_003919902.1| PREDICTED: fatty acyl-CoA reductase 1 [Saimiri boliviensis boliviensis]

 Score =  149 bits (375), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 68/148 (45%), Positives = 106/148 (71%)

Query: 30  VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSV 89
           + ++Y    +L+TG TGF+GK+L++KLLRS P + ++Y++VR K G +P+ERV+ +L+S 
Sbjct: 4   IPEYYEGKNVLLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEILSSK 63

Query: 90  IFDRLNKEVPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQK 149
           +FDRL  E PDFR KI  I S L    L LSE+ +++I    NIIFHCAA++RF+E L+ 
Sbjct: 64  LFDRLRDENPDFREKIIAINSELTQPKLALSEEDKEVIIDSTNIIFHCAATVRFNENLRD 123

Query: 150 AIRANLYATKQMLNLAKECVNLKRFCEL 177
           A++ N+ AT+Q++ LA++  NL+ F  +
Sbjct: 124 AVQLNVIATRQLILLAQQMKNLEVFMHV 151

Source: Saimiri boliviensis boliviensis

Species: Saimiri boliviensis

Genus: Saimiri

Family: Cebidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|354505395|ref|XP_003514755.1| PREDICTED: fatty acyl-CoA reductase 1 isoform 1 [Cricetulus griseus] gi|344258409|gb|EGW14513.1| Fatty acyl-CoA reductase 1 [Cricetulus griseus]

 Score =  149 bits (375), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 69/148 (46%), Positives = 105/148 (70%)

Query: 30  VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSV 89
           + ++Y    IL+TG TGF+GK+L++KLLRS P + ++Y++VR K G +P+ERV+ +L+  
Sbjct: 4   IPEYYEGKNILLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEILSGK 63

Query: 90  IFDRLNKEVPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQK 149
           +FDRL  E PDFR KI  I S L    L LSE+ ++LI    NIIFHCAA++RF+E L+ 
Sbjct: 64  LFDRLRDENPDFREKIIAINSELTQPKLALSEEDKELIIDSTNIIFHCAATVRFNENLRD 123

Query: 150 AIRANLYATKQMLNLAKECVNLKRFCEL 177
           A++ N+ AT+Q++ LA++  NL+ F  +
Sbjct: 124 AVQLNVIATRQLILLAQQMKNLEVFMHV 151

Source: Cricetulus griseus

Species: Cricetulus griseus

Genus: Cricetulus

Family: Cricetidae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|68448551|ref|NP_081655.2| fatty acyl-CoA reductase 1 [Mus musculus] gi|74096448|ref|NP_080419.2| fatty acyl-CoA reductase 1 [Mus musculus] gi|81902605|sp|Q922J9.1|FACR1_MOUSE RecName: Full=Fatty acyl-CoA reductase 1; AltName: Full=Male sterility domain-containing protein 2 gi|13938126|gb|AAH07178.1| Fatty acyl CoA reductase 1 [Mus musculus] gi|26326045|dbj|BAC26766.1| unnamed protein product [Mus musculus] gi|148685102|gb|EDL17049.1| male sterility domain containing 2, isoform CRA_a [Mus musculus] gi|148685103|gb|EDL17050.1| male sterility domain containing 2, isoform CRA_a [Mus musculus] gi|148685104|gb|EDL17051.1| male sterility domain containing 2, isoform CRA_a [Mus musculus]

 Score =  149 bits (375), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 68/148 (45%), Positives = 106/148 (71%)

Query: 30  VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSV 89
           + ++Y    IL+TG TGF+GK+L++KLLRS P + ++Y++VR K G +P+ERV+ +L+S 
Sbjct: 4   IPEYYEGKNILLTGATGFLGKVLLEKLLRSCPRVNSVYVLVRQKAGQTPQERVEEILSSK 63

Query: 90  IFDRLNKEVPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQK 149
           +FDRL  E PDFR KI  I S L    L LSE+ +++I    N+IFHCAA++RF+E L+ 
Sbjct: 64  LFDRLRDENPDFREKIIAINSELTQPKLALSEEDKEIIIDSTNVIFHCAATVRFNENLRD 123

Query: 150 AIRANLYATKQMLNLAKECVNLKRFCEL 177
           A++ N+ AT+Q++ LA++  NL+ F  +
Sbjct: 124 AVQLNVIATRQLILLAQQMKNLEVFMHV 151

Source: Mus musculus

Species: Mus musculus

Genus: Mus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|12852375|dbj|BAB29388.1| unnamed protein product [Mus musculus]

 Score =  148 bits (374), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 68/148 (45%), Positives = 106/148 (71%)

Query: 30  VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSV 89
           + ++Y    IL+TG TGF+GK+L++KLLRS P + ++Y++VR K G +P+ERV+ +L+S 
Sbjct: 4   IPEYYEGKNILLTGATGFLGKVLLEKLLRSCPRVNSVYVLVRQKAGQTPQERVEEILSSK 63

Query: 90  IFDRLNKEVPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQK 149
           +FDRL  E PDFR KI  I S L    L LSE+ +++I    N+IFHCAA++RF+E L+ 
Sbjct: 64  LFDRLRDENPDFREKIIAINSELTQPKLALSEEDKEIIIDSTNVIFHCAATVRFNENLRD 123

Query: 150 AIRANLYATKQMLNLAKECVNLKRFCEL 177
           A++ N+ AT+Q++ LA++  NL+ F  +
Sbjct: 124 AVQLNVIATRQLILLAQQMKNLEVFMHV 151

Source: Mus musculus

Species: Mus musculus

Genus: Mus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|395815293|ref|XP_003781165.1| PREDICTED: fatty acyl-CoA reductase 1 [Otolemur garnettii]

 Score =  148 bits (374), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 68/148 (45%), Positives = 106/148 (71%)

Query: 30  VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSV 89
           + ++Y    +L+TG TGF+GK+L++KLLRS P + ++Y++VR K G +P+ERV+ +L+  
Sbjct: 4   IPEYYEGKNVLLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVLSGK 63

Query: 90  IFDRLNKEVPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQK 149
           +FDRL  E PDFR KI  I S L    L LSE+ +++I   VNIIFHCAA++RF+E L+ 
Sbjct: 64  LFDRLRDENPDFREKIIAINSELTQPKLALSEEDKEVIIDSVNIIFHCAATVRFNENLRD 123

Query: 150 AIRANLYATKQMLNLAKECVNLKRFCEL 177
           A++ N+ AT+Q++ LA++  NL+ F  +
Sbjct: 124 AVQLNVIATRQLILLAQQMKNLEVFMHV 151

Source: Otolemur garnettii

Species: Otolemur garnettii

Genus: Otolemur

Family: Galagidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|26329369|dbj|BAC28423.1| unnamed protein product [Mus musculus] gi|148685106|gb|EDL17053.1| male sterility domain containing 2, isoform CRA_c [Mus musculus]

 Score =  148 bits (374), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 68/148 (45%), Positives = 106/148 (71%)

Query: 30  VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSV 89
           + ++Y    IL+TG TGF+GK+L++KLLRS P + ++Y++VR K G +P+ERV+ +L+S 
Sbjct: 4   IPEYYEGKNILLTGATGFLGKVLLEKLLRSCPRVNSVYVLVRQKAGQTPQERVEEILSSK 63

Query: 90  IFDRLNKEVPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQK 149
           +FDRL  E PDFR KI  I S L    L LSE+ +++I    N+IFHCAA++RF+E L+ 
Sbjct: 64  LFDRLRDENPDFREKIIAINSELTQPKLALSEEDKEIIIDSTNVIFHCAATVRFNENLRD 123

Query: 150 AIRANLYATKQMLNLAKECVNLKRFCEL 177
           A++ N+ AT+Q++ LA++  NL+ F  +
Sbjct: 124 AVQLNVIATRQLILLAQQMKNLEVFMHV 151

Source: Mus musculus

Species: Mus musculus

Genus: Mus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|354505397|ref|XP_003514756.1| PREDICTED: fatty acyl-CoA reductase 1 isoform 2 [Cricetulus griseus]

 Score =  148 bits (373), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 69/148 (46%), Positives = 105/148 (70%)

Query: 30  VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSV 89
           + ++Y    IL+TG TGF+GK+L++KLLRS P + ++Y++VR K G +P+ERV+ +L+  
Sbjct: 4   IPEYYEGKNILLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEILSGK 63

Query: 90  IFDRLNKEVPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQK 149
           +FDRL  E PDFR KI  I S L    L LSE+ ++LI    NIIFHCAA++RF+E L+ 
Sbjct: 64  LFDRLRDENPDFREKIIAINSELTQPKLALSEEDKELIIDSTNIIFHCAATVRFNENLRD 123

Query: 150 AIRANLYATKQMLNLAKECVNLKRFCEL 177
           A++ N+ AT+Q++ LA++  NL+ F  +
Sbjct: 124 AVQLNVIATRQLILLAQQMKNLEVFMHV 151

Source: Cricetulus griseus

Species: Cricetulus griseus

Genus: Cricetulus

Family: Cricetidae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|363548370|gb|AEW27157.1| fatty acyl-CoA reductase [Tyto alba]

 Score =  147 bits (372), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 69/148 (46%), Positives = 104/148 (70%)

Query: 30  VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSV 89
           + ++Y    IL+TG TGFMGK+L++KLLRS P + A+Y++VR K G +PE R++ + N  
Sbjct: 4   IPEYYEGKNILLTGATGFMGKVLLEKLLRSCPKVKAVYVLVRHKAGQTPEARIEEITNCK 63

Query: 90  IFDRLNKEVPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQK 149
           +FDRL  E PDF++KI VI S L    L LSE  ++ +  ++NIIFHCAA++RF+E L+ 
Sbjct: 64  LFDRLRDEQPDFKAKIIVITSELTQPELDLSEPIKEKLIERINIIFHCAATVRFNETLRD 123

Query: 150 AIRANLYATKQMLNLAKECVNLKRFCEL 177
           A++ N+ AT+Q+L LA+   NL+ F  +
Sbjct: 124 AVQLNVTATQQLLFLAQRMKNLEVFMHV 151

Source: Tyto alba

Species: Tyto alba

Genus: Tyto

Family: Tytonidae

Order: Strigiformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	177
MGI|MGI:1914670	515	Far1 "fatty acyl CoA reductase	0.819	0.281	0.468	5.8e-34
UNIPROTKB|E2R4R9	514	FAR1 "Uncharacterized protein"	0.819	0.282	0.448	1.2e-33
RGD|1306647	515	Far1 "fatty acyl CoA reductase	0.819	0.281	0.462	1.2e-33
UNIPROTKB|Q66H50	515	Far1 "Fatty acyl-CoA reductase	0.819	0.281	0.462	1.2e-33
UNIPROTKB|E9PNW8	335	FAR1 "Fatty acyl-CoA reductase	0.819	0.432	0.462	1.5e-33
UNIPROTKB|Q8WVX9	515	FAR1 "Fatty acyl-CoA reductase	0.819	0.281	0.462	1.5e-33
UNIPROTKB|A5PJQ0	515	FAR1 "Uncharacterized protein"	0.819	0.281	0.455	2e-33
UNIPROTKB|E1C023	517	FAR1 "Fatty acyl-CoA reductase	0.813	0.278	0.472	6.7e-33
UNIPROTKB|Q5ZM72	515	FAR1 "Fatty acyl-CoA reductase	0.813	0.279	0.472	6.7e-33
UNIPROTKB|E1C6H7	511	FAR2 "Uncharacterized protein"	0.830	0.287	0.463	8.5e-33

MGI|MGI:1914670 Far1 "fatty acyl CoA reductase 1" [Mus musculus (taxid:10090)]

 Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
 Identities = 68/145 (46%), Positives = 105/145 (72%)

Query:    30 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSV 89
             + ++Y    IL+TG TGF+GK+L++KLLRS P + ++Y++VR K G +P+ERV+ +L+S 
Sbjct:     4 IPEYYEGKNILLTGATGFLGKVLLEKLLRSCPRVNSVYVLVRQKAGQTPQERVEEILSSK 63

Query:    90 IFDRLNKEVPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQK 149
             +FDRL  E PDFR KI  I S L    L LSE+ +++I    N+IFHCAA++RF+E L+ 
Sbjct:    64 LFDRLRDENPDFREKIIAINSELTQPKLALSEEDKEIIIDSTNVIFHCAATVRFNENLRD 123

Query:   150 AIRANLYATKQMLNLAKECVNLKRF 174
             A++ N+ AT+Q++ LA++  NL+ F
Sbjct:   124 AVQLNVIATRQLILLAQQMKNLEVF 148

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005777 "peroxisome" evidence=ISO;IDA

GO:0005778 "peroxisomal membrane" evidence=ISO

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0008611 "ether lipid biosynthetic process" evidence=ISO

GO:0010025 "wax biosynthetic process" evidence=IDA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0035336 "long-chain fatty-acyl-CoA metabolic process" evidence=ISO

GO:0046474 "glycerophospholipid biosynthetic process" evidence=ISO

GO:0050062 "long-chain-fatty-acyl-CoA reductase activity" evidence=IDA

GO:0055114 "oxidation-reduction process" evidence=IDA

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=ISO

UNIPROTKB|E2R4R9 FAR1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
 Identities = 65/145 (44%), Positives = 105/145 (72%)

Query:    30 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSV 89
             + ++Y    +L+TG TGF+GK+L++KLLRS P + ++Y++VR K G +P+ERV+ +++  
Sbjct:     4 IPEYYEGKNVLLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVISGK 63

Query:    90 IFDRLNKEVPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQK 149
             +FDRL  E PDFR K+  I S L    L LSE+ +++I   +NIIFHCAA++RF+E L+ 
Sbjct:    64 LFDRLRDENPDFREKVIAINSELTQPKLALSEEDKEIIIDSINIIFHCAATVRFNENLRD 123

Query:   150 AIRANLYATKQMLNLAKECVNLKRF 174
             A++ N+ AT+Q++ LA++  NL+ F
Sbjct:   124 AVQLNVIATRQLILLAQQMKNLEVF 148

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

RGD|1306647 Far1 "fatty acyl CoA reductase 1" [Rattus norvegicus (taxid:10116)]

 Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
 Identities = 67/145 (46%), Positives = 104/145 (71%)

Query:    30 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSV 89
             + ++Y    IL+TG TGF+GK+L++KLLRS P + ++Y++VR K G +P+ERV+ +L+  
Sbjct:     4 IPEYYEGKNILLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEILSGK 63

Query:    90 IFDRLNKEVPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQK 149
             +FDRL  E PDFR KI  I S L    L LSE+ +++I    N+IFHCAA++RF+E L+ 
Sbjct:    64 LFDRLRDENPDFRQKIIAINSELTQPKLALSEEDKEIIIDSTNVIFHCAATVRFNENLRD 123

Query:   150 AIRANLYATKQMLNLAKECVNLKRF 174
             A++ N+ AT+Q++ LA++  NL+ F
Sbjct:   124 AVQLNVIATRQLILLAQQMKNLEVF 148

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005777 "peroxisome" evidence=ISO

GO:0005778 "peroxisomal membrane" evidence=IEA;ISO

GO:0008611 "ether lipid biosynthetic process" evidence=IEA;ISO

GO:0010025 "wax biosynthetic process" evidence=IEA;ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0035336 "long-chain fatty-acyl-CoA metabolic process" evidence=IEA;ISO

GO:0046474 "glycerophospholipid biosynthetic process" evidence=IEA;ISO

GO:0050062 "long-chain-fatty-acyl-CoA reductase activity" evidence=IEA;ISO

GO:0055114 "oxidation-reduction process" evidence=ISO

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA;ISO

UNIPROTKB|Q66H50 Far1 "Fatty acyl-CoA reductase 1" [Rattus norvegicus (taxid:10116)]

 Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
 Identities = 67/145 (46%), Positives = 104/145 (71%)

Query:    30 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSV 89
             + ++Y    IL+TG TGF+GK+L++KLLRS P + ++Y++VR K G +P+ERV+ +L+  
Sbjct:     4 IPEYYEGKNILLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEILSGK 63

Query:    90 IFDRLNKEVPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQK 149
             +FDRL  E PDFR KI  I S L    L LSE+ +++I    N+IFHCAA++RF+E L+ 
Sbjct:    64 LFDRLRDENPDFRQKIIAINSELTQPKLALSEEDKEIIIDSTNVIFHCAATVRFNENLRD 123

Query:   150 AIRANLYATKQMLNLAKECVNLKRF 174
             A++ N+ AT+Q++ LA++  NL+ F
Sbjct:   124 AVQLNVIATRQLILLAQQMKNLEVF 148

GO:0000166 "nucleotide binding" evidence=IEA

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

UNIPROTKB|E9PNW8 FAR1 "Fatty acyl-CoA reductase 1" [Homo sapiens (taxid:9606)]

 Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
 Identities = 67/145 (46%), Positives = 104/145 (71%)

Query:    30 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSV 89
             + ++Y    +L+TG TGF+GK+L++KLLRS P + ++Y++VR K G +P+ERV+ +L+  
Sbjct:     4 IPEYYEGKNVLLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVLSGK 63

Query:    90 IFDRLNKEVPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQK 149
             +FDRL  E PDFR KI  I S L    L LSE+ +++I    NIIFHCAA++RF+E L+ 
Sbjct:    64 LFDRLRDENPDFREKIIAINSELTQPKLALSEEDKEVIIDSTNIIFHCAATVRFNENLRD 123

Query:   150 AIRANLYATKQMLNLAKECVNLKRF 174
             A++ N+ AT+Q++ LA++  NL+ F
Sbjct:   124 AVQLNVIATRQLILLAQQMKNLEVF 148

GO:0000166 "nucleotide binding" evidence=IEA

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

UNIPROTKB|Q8WVX9 FAR1 "Fatty acyl-CoA reductase 1" [Homo sapiens (taxid:9606)]

 Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
 Identities = 67/145 (46%), Positives = 104/145 (71%)

Query:    30 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSV 89
             + ++Y    +L+TG TGF+GK+L++KLLRS P + ++Y++VR K G +P+ERV+ +L+  
Sbjct:     4 IPEYYEGKNVLLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVLSGK 63

Query:    90 IFDRLNKEVPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQK 149
             +FDRL  E PDFR KI  I S L    L LSE+ +++I    NIIFHCAA++RF+E L+ 
Sbjct:    64 LFDRLRDENPDFREKIIAINSELTQPKLALSEEDKEVIIDSTNIIFHCAATVRFNENLRD 123

Query:   150 AIRANLYATKQMLNLAKECVNLKRF 174
             A++ N+ AT+Q++ LA++  NL+ F
Sbjct:   124 AVQLNVIATRQLILLAQQMKNLEVF 148

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0010025 "wax biosynthetic process" evidence=IEA

GO:0050062 "long-chain-fatty-acyl-CoA reductase activity" evidence=IEA

GO:0046474 "glycerophospholipid biosynthetic process" evidence=IDA

GO:0008611 "ether lipid biosynthetic process" evidence=IMP;TAS

GO:0005777 "peroxisome" evidence=IDA

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IDA

GO:0005778 "peroxisomal membrane" evidence=IDA

GO:0035336 "long-chain fatty-acyl-CoA metabolic process" evidence=IDA

GO:0005782 "peroxisomal matrix" evidence=TAS

GO:0044255 "cellular lipid metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

UNIPROTKB|A5PJQ0 FAR1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
 Identities = 66/145 (45%), Positives = 104/145 (71%)

Query:    30 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSV 89
             + ++Y    +L+TG TGF+GK+L++KLLRS P + ++Y++VR K G +P+ERV+ +++  
Sbjct:     4 IPEYYEGKNVLLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVISGK 63

Query:    90 IFDRLNKEVPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQK 149
             +FDRL  E PDFR KI  I S L    L LSE+ +++I    NIIFHCAA++RF+E L+ 
Sbjct:    64 LFDRLRDENPDFREKIIAINSELTQPKLALSEEDKEIIIDSTNIIFHCAATVRFNENLRD 123

Query:   150 AIRANLYATKQMLNLAKECVNLKRF 174
             A++ N+ AT+Q++ LA++  NL+ F
Sbjct:   124 AVQLNVIATRQLILLAQQMKNLEVF 148

GO:0050062 "long-chain-fatty-acyl-CoA reductase activity" evidence=IEA

GO:0046474 "glycerophospholipid biosynthetic process" evidence=IEA

GO:0035336 "long-chain fatty-acyl-CoA metabolic process" evidence=IEA

GO:0010025 "wax biosynthetic process" evidence=IEA

GO:0008611 "ether lipid biosynthetic process" evidence=IEA

GO:0005778 "peroxisomal membrane" evidence=IEA

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|E1C023 FAR1 "Fatty acyl-CoA reductase 1" [Gallus gallus (taxid:9031)]

 Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
 Identities = 69/146 (47%), Positives = 105/146 (71%)

Query:    30 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSV 89
             + ++Y    +L+TG TGFMGK+L++KLLRS P + A+Y++VR K G +PE R++ + +  
Sbjct:     4 IPEYYEGKNVLLTGATGFMGKVLLEKLLRSCPKVKAVYVLVRPKAGQTPEARIEEITSCK 63

Query:    90 IFDRLNKEVPDFRSKIQVIPSNLESEHLGLSED-SEQLIKSKVNIIFHCAASLRFDEALQ 148
             +FDRL +E PDF+ KI VI S L    L LS    E+LI+  +NIIFHCAA++RF+E L+
Sbjct:    64 LFDRLREEQPDFKEKIIVITSELTQPELDLSNPVKEKLIEC-INIIFHCAATVRFNETLR 122

Query:   149 KAIRANLYATKQMLNLAKECVNLKRF 174
              A++ N+ +TKQ+L+LA++  NL+ F
Sbjct:   123 DAVQLNVLSTKQLLSLAQQMTNLEVF 148

GO:0000166 "nucleotide binding" evidence=IEA

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

GO:0005778 "peroxisomal membrane" evidence=IEA

GO:0008611 "ether lipid biosynthetic process" evidence=IEA

GO:0010025 "wax biosynthetic process" evidence=IEA

GO:0035336 "long-chain fatty-acyl-CoA metabolic process" evidence=IEA

GO:0046474 "glycerophospholipid biosynthetic process" evidence=IEA

GO:0050062 "long-chain-fatty-acyl-CoA reductase activity" evidence=IEA

UNIPROTKB|Q5ZM72 FAR1 "Fatty acyl-CoA reductase 1" [Gallus gallus (taxid:9031)]

 Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
 Identities = 69/146 (47%), Positives = 105/146 (71%)

Query:    30 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSV 89
             + ++Y    +L+TG TGFMGK+L++KLLRS P + A+Y++VR K G +PE R++ + +  
Sbjct:     4 IPEYYEGKNVLLTGATGFMGKVLLEKLLRSCPKVKAVYVLVRPKAGQTPEARIEEITSCK 63

Query:    90 IFDRLNKEVPDFRSKIQVIPSNLESEHLGLSED-SEQLIKSKVNIIFHCAASLRFDEALQ 148
             +FDRL +E PDF+ KI VI S L    L LS    E+LI+  +NIIFHCAA++RF+E L+
Sbjct:    64 LFDRLREEQPDFKEKIIVITSELTQPELDLSNPVKEKLIEC-INIIFHCAATVRFNETLR 122

Query:   149 KAIRANLYATKQMLNLAKECVNLKRF 174
              A++ N+ +TKQ+L+LA++  NL+ F
Sbjct:   123 DAVQLNVLSTKQLLSLAQQMTNLEVF 148

GO:0000166 "nucleotide binding" evidence=IEA

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005778 "peroxisomal membrane" evidence=IEA

UNIPROTKB|E1C6H7 FAR2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
 Identities = 69/149 (46%), Positives = 104/149 (69%)

Query:    30 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSV 89
             V  +Y    +L+TG TGFMGK+L++KLLRS PD+ A+YI+VR K G S +ERV NML   
Sbjct:     4 VSAYYNGKTVLITGATGFMGKVLVEKLLRSSPDVKAVYILVRPKAGQSMQERVANMLKCK 63

Query:    90 IFDRLNKEVPDFRSKIQVIPSNLESEHLGLS-EDSEQLIKSKVNIIFHCAASLRFDEALQ 148
             +FDR+ ++ P+F  KI+ I + L    L +S ED E+L+ ++VNI+FHCAA++RFDE L+
Sbjct:    64 VFDRVREDCPNFHEKIKPINAELTQPKLAISAEDEEELL-TRVNIVFHCAATVRFDEPLK 122

Query:   149 KAIRANLYATKQMLNLAKECVNLKRFCEL 177
              A++ N   T+++L LA++   L+ F  +
Sbjct:   123 HALQLNAMGTQRLLELAQQMQKLEAFIHI 151

GO:0000166 "nucleotide binding" evidence=IEA

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

GO:0005777 "peroxisome" evidence=IEA

GO:0035336 "long-chain fatty-acyl-CoA metabolic process" evidence=IEA

GO:0050062 "long-chain-fatty-acyl-CoA reductase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	177
cd05236	320	cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (F	1e-55
pfam07993	245	pfam07993, NAD_binding_4, Male sterility protein	3e-41
PLN02503	605	PLN02503, PLN02503, fatty acyl-CoA reductase 2	2e-24
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	2e-19
cd05235	290	cd05235, SDR_e1, extended (e) SDRs, subgroup 1	7e-19
PLN02996	491	PLN02996, PLN02996, fatty acyl-CoA reductase	6e-17
COG3320	382	COG3320, COG3320, Putative dehydrogenase domain of	1e-10
TIGR01746	367	TIGR01746, Thioester-redct, thioester reductase do	7e-10
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	9e-10
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	5e-07
cd08946	200	cd08946, SDR_e, extended (e) SDRs	7e-07
TIGR03443	1389	TIGR03443, alpha_am_amid, L-aminoadipate-semialdeh	5e-06
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	8e-06
cd05246	315	cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra	3e-05
cd05237	287	cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-l	3e-04
TIGR02197	314	TIGR02197, heptose_epim, ADP-L-glycero-D-manno-hep	6e-04
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	0.001
cd05248	317	cd05248, ADP_GME_SDR_e, ADP-L-glycero-D-mannohepto	0.003
COG1086	588	COG1086, COG1086, Predicted nucleoside-diphosphate	0.003

>gnl|CDD|187547 cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs

 Score =  177 bits (452), Expect = 1e-55
 Identities = 66/136 (48%), Positives = 92/136 (67%)

Query: 39  ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEV 98
           +L+TG TGF+GK+L++KLLRS PDIG IY+++R K G S EER++ +L   +FDR     
Sbjct: 3   VLITGATGFLGKVLLEKLLRSCPDIGKIYLLIRGKSGQSAEERLRELLKDKLFDRGRNLN 62

Query: 99  PDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYAT 158
           P F SKI  I  +L   +LGLS++  Q +  +VNII HCAA++ FDE L +A+  N+  T
Sbjct: 63  PLFESKIVPIEGDLSEPNLGLSDEDLQTLIEEVNIIIHCAATVTFDERLDEALSINVLGT 122

Query: 159 KQMLNLAKECVNLKRF 174
            ++L LAK C  LK F
Sbjct: 123 LRLLELAKRCKKLKAF 138

SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 320

>gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein

 Score =  138 bits (350), Expect = 3e-41
 Identities = 49/132 (37%), Positives = 78/132 (59%), Gaps = 7/132 (5%)

Query: 41  VTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERV-KNMLNSVIFDRLNKEVP 99
           +TG TGF+GK+L++KLLRS P++  IY +VR K G S  ER+ + +L   +FDRL     
Sbjct: 1   LTGATGFLGKVLLEKLLRSTPEV-KIYCLVRAKDGESALERLRQELLKYGLFDRLK---- 55

Query: 100 DFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATK 159
               +I  +  +L   +LGLS++  Q +  +V++I H AA++ F E        N+  T+
Sbjct: 56  -ALERIIPVAGDLSEPNLGLSDEDFQELAEEVDVIIHNAATVNFVEPYSDLRATNVLGTR 114

Query: 160 QMLNLAKECVNL 171
           ++L LAK+   L
Sbjct: 115 EVLRLAKQMKKL 126

This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245

>gnl|CDD|215279 PLN02503, PLN02503, fatty acyl-CoA reductase 2

 Score = 98.8 bits (246), Expect = 2e-24
 Identities = 53/157 (33%), Positives = 87/157 (55%), Gaps = 6/157 (3%)

Query: 24  MQEEQKVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVK 83
           M +   + +F R    L+TG TGF+ K+LI+K+LR+ PD+G IY++++ K   +  ER+K
Sbjct: 107 MADGIGIAEFLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLK 166

Query: 84  N-MLNSVIFDRLN----KEVPDFR-SKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHC 137
           N ++++ +F  L     K    F  SK+  +  N+   +LGL  D    I  +V++I + 
Sbjct: 167 NEVIDAELFKCLQETHGKSYQSFMLSKLVPVVGNVCESNLGLEPDLADEIAKEVDVIINS 226

Query: 138 AASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRF 174
           AA+  FDE    AI  N      +++ AK+C  LK F
Sbjct: 227 AANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLF 263

Length = 605

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 82.8 bits (205), Expect = 2e-19
 Identities = 39/137 (28%), Positives = 69/137 (50%), Gaps = 17/137 (12%)

Query: 39  ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEV 98
           + VTGGTGF+G+ L+ +LL    +   + ++VR +      ER++             E 
Sbjct: 1   VFVTGGTGFLGRHLVKRLL---ENGFKVLVLVRSESLGEAHERIE-------------EA 44

Query: 99  PDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYAT 158
                +++V+  +L   +LGLS  + + +  KV+ + HCAAS  F    + A R N+  T
Sbjct: 45  GLEADRVRVLEGDLTQPNLGLSAAASRELAGKVDHVIHCAASYDFQAPNEDAWRTNIDGT 104

Query: 159 KQMLNLAKECVNLKRFC 175
           + +L LA    +++RF 
Sbjct: 105 EHVLELAARL-DIQRFH 120

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1

 Score = 81.2 bits (201), Expect = 7e-19
 Identities = 43/131 (32%), Positives = 72/131 (54%), Gaps = 10/131 (7%)

Query: 38  QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKE 97
            +L+TG TGF+G  L+ +LL+   ++  IY +VR K   +  ER+ + L       L  E
Sbjct: 1   TVLLTGATGFLGAYLLRELLKR-KNVSKIYCLVRAKDEEAALERLIDNLKEY-GLNLWDE 58

Query: 98  VPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRF---DEALQKAIRAN 154
                S+I+V+  +L   +LGLS+D  Q +  +V++I H  A++ +    E L+    AN
Sbjct: 59  --LELSRIKVVVGDLSKPNLGLSDDDYQELAEEVDVIIHNGANVNWVYPYEELKP---AN 113

Query: 155 LYATKQMLNLA 165
           +  TK++L LA
Sbjct: 114 VLGTKELLKLA 124

This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290

>gnl|CDD|215538 PLN02996, PLN02996, fatty acyl-CoA reductase

 Score = 77.1 bits (190), Expect = 6e-17
 Identities = 43/154 (27%), Positives = 82/154 (53%), Gaps = 7/154 (4%)

Query: 26  EEQKVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKN- 84
           EE     F  +  ILVTG TGF+ K+ ++K+LR  P++  +Y+++R     S  +R+ + 
Sbjct: 1   EEGSCVQFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDE 60

Query: 85  MLNSVIFDRL-NKEVPDFRS----KIQVIPSNLESEHLGLSE-DSEQLIKSKVNIIFHCA 138
           ++   +F  L  K   +  S    K+  +P ++  + LG+ + +  + +  +++I+ + A
Sbjct: 61  VIGKDLFKVLREKLGENLNSLISEKVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLA 120

Query: 139 ASLRFDEALQKAIRANLYATKQMLNLAKECVNLK 172
           A+  FDE    A+  N      +LN AK+CV +K
Sbjct: 121 ATTNFDERYDVALGINTLGALNVLNFAKKCVKVK 154

Length = 491

>gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

 Score = 58.6 bits (142), Expect = 1e-10
 Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 7/127 (5%)

Query: 39  ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEV 98
           +L+TG TGF+G  L+ +LL        +  +VR     S E  +  +  +    R   E+
Sbjct: 3   VLLTGATGFLGAYLLLELLDRSD--AKVICLVR---AQSDEAALARLEKTFDLYRHWDEL 57

Query: 99  PDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYAT 158
                +++V+  +L    LGLSE + Q +   V++I H AA +       +   AN+  T
Sbjct: 58  --SADRVEVVAGDLAEPDLGLSERTWQELAENVDLIIHNAALVNHVFPYSELRGANVLGT 115

Query: 159 KQMLNLA 165
            ++L LA
Sbjct: 116 AEVLRLA 122

Length = 382

>gnl|CDD|233557 TIGR01746, Thioester-redct, thioester reductase domain

 Score = 56.6 bits (137), Expect = 7e-10
 Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 5/128 (3%)

Query: 38  QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKE 97
            +L+TG TGF+G  L+++LLR       +  +VR        ER++  L S    RL  E
Sbjct: 1   TVLLTGATGFLGAYLLEELLRRSTQAK-VICLVRAASEEHAMERLREALRSY---RLWHE 56

Query: 98  VPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYA 157
               R +I+V+  +L    LGLS+   + +   V+ I H  A + +     +   AN+  
Sbjct: 57  DLA-RERIEVVAGDLSEPRLGLSDAEWERLAENVDTIVHNGALVNWVYPYSELRGANVLG 115

Query: 158 TKQMLNLA 165
           T+++L LA
Sbjct: 116 TREVLRLA 123

This model includes the terminal domain from the fungal alpha aminoadipate reductase enzyme (also known as aminoadipate semialdehyde dehydrogenase) which is involved in the biosynthesis of lysine , as well as the reductase-containing component of the myxochelin biosynthetic gene cluster, MxcG. The mechanism of reduction involves activation of the substrate by adenylation and transfer to a covalently-linked pantetheine cofactor as a thioester. This thioester is then reduced to give an aldehyde (thus releasing the product) and a regenerated pantetheine thiol. (In myxochelin biosynthesis this aldehyde is further reduced to an alcohol or converted to an amine by an aminotransferase.) This is a fundamentally different reaction than beta-ketoreductase domains of polyketide synthases which act at a carbonyl two carbons removed from the thioester and forms an alcohol as a product. This domain is invariably found at the C-terminus of the proteins which contain it (presumably because it results in the release of the product). The majority of hits to this model are non-ribosomal peptide synthetases in which this domain is similarly located proximal to a thiolation domain (pfam00550). In some cases this domain is found at the end of a polyketide synthetase enzyme, but is unlike ketoreductase domains which are found before the thiolase domains. Exceptions to this observed relationship with the thiolase domain include three proteins which consist of stand-alone reductase domains (GP|466833 from M. leprae, GP|435954 from Anabaena and OMNI|NTL02SC1199 from Strep. coelicolor) and one protein (OMNI|NTL01NS2636 from Nostoc) which contains N-terminal homology with a small group of hypothetical proteins but no evidence of a thiolation domain next to the putative reductase domain. Below the noise cutoff to this model are proteins containing more distantly related ketoreductase and dehydratase/epimerase domains. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. Length = 367

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 56.1 bits (136), Expect = 9e-10
 Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 23/131 (17%)

Query: 40  LVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVP 99
            VTGGTGF+G+ L+ +LL    +   ++++VR         R++ +      DR      
Sbjct: 4   FVTGGTGFIGRRLVSRLLDRRRE-ATVHVLVRR----QSLSRLEALAAYWGADR------ 52

Query: 100 DFRSKIQVIPSNLESEHLGLS-EDSEQLIKSKVNIIFHCAA--SLRFDEALQKAIRANLY 156
                +  +  +L    LGLS  D  +L    ++ + H AA   L  DE  Q    AN+ 
Sbjct: 53  -----VVPLVGDLTEPGLGLSEADIAEL--GDIDHVVHLAAIYDLTADEEAQ--RAANVD 103

Query: 157 ATKQMLNLAKE 167
            T+ ++ LA+ 
Sbjct: 104 GTRNVVELAER 114

Length = 657

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 48.0 bits (114), Expect = 5e-07
 Identities = 30/140 (21%), Positives = 54/140 (38%), Gaps = 35/140 (25%)

Query: 39  ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEV 98
           ILVTGG GF+G  L+++LL +  D+                            DRL   +
Sbjct: 3   ILVTGGAGFIGSHLVERLLAAGHDV-------------------------RGLDRLRDGL 37

Query: 99  PDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEAL----QKAIRAN 154
               S ++ +  +L        +  ++L K   + + H AA     ++      + +  N
Sbjct: 38  DPLLSGVEFVVLDLTD-----RDLVDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVN 92

Query: 155 LYATKQMLNLAKECVNLKRF 174
           +  T  +L  A+    +KRF
Sbjct: 93  VDGTLNLLEAARAA-GVKRF 111

Length = 314

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score = 46.9 bits (112), Expect = 7e-07
 Identities = 26/139 (18%), Positives = 42/139 (30%), Gaps = 66/139 (47%)

Query: 39  ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEV 98
           ILVTGG GF+G  L+ +LL    ++                         V+ DRL    
Sbjct: 1   ILVTGGAGFIGSHLVRRLLERGHEV-------------------------VVIDRL---- 31

Query: 99  PDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKA---IRANL 155
                                            +++ H AA +    +          N+
Sbjct: 32  ---------------------------------DVVVHLAALVGVPASWDNPDEDFETNV 58

Query: 156 YATKQMLNLAKECVNLKRF 174
             T  +L  A++   +KRF
Sbjct: 59  VGTLNLLEAARKA-GVKRF 76

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|234212 TIGR03443, alpha_am_amid, L-aminoadipate-semialdehyde dehydrogenase

 Score = 45.4 bits (108), Expect = 5e-06
 Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 6/130 (4%)

Query: 39   ILVTGGTGFMGKLLIDKLL-RSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKE 97
            + +TG TGF+G  ++  LL R       ++  VR K   +  ER++       +   ++E
Sbjct: 974  VFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRK--TGTTYGIWDEE 1031

Query: 98   VPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYA 157
               + S+I+V+  +L  E  GLS++    + ++V++I H  A + +     K   AN+  
Sbjct: 1032 ---WASRIEVVLGDLSKEKFGLSDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIG 1088

Query: 158  TKQMLNLAKE 167
            T  +LNL  E
Sbjct: 1089 TINVLNLCAE 1098

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. Length = 1389

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 44.2 bits (105), Expect = 8e-06
 Identities = 31/140 (22%), Positives = 54/140 (38%), Gaps = 35/140 (25%)

Query: 39  ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEV 98
           ILVTGGTGF+G  L+ +LL+   ++  +                +    S+   R+    
Sbjct: 1   ILVTGGTGFIGSHLVRRLLQEGYEVIVLGR--------------RRRSESLNTGRIRFHE 46

Query: 99  PDFRSKIQVIPSNLESEHLGLSEDSEQLIK-SKVNIIFHCAASLRFDEALQKA---IRAN 154
            D      +                E+L+   + + + H AA      + +     IRAN
Sbjct: 47  GDLTDPDAL----------------ERLLAEVQPDAVIHLAAQSGVGASFEDPADFIRAN 90

Query: 155 LYATKQMLNLAKECVNLKRF 174
           +  T ++L  A+    +KRF
Sbjct: 91  VLGTLRLLEAARRA-GVKRF 109

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 42.5 bits (101), Expect = 3e-05
 Identities = 36/141 (25%), Positives = 56/141 (39%), Gaps = 28/141 (19%)

Query: 39  ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK--KGSSPEERVKNMLNSVIFDRLNK 96
           ILVTGG GF+G   +  LL  +PD     I+  DK     + E      L  V       
Sbjct: 3   ILVTGGAGFIGSNFVRYLLNKYPD---YKIINLDKLTYAGNLEN-----LEDV------S 48

Query: 97  EVPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKA---IRA 153
             P +R     +  ++    L          + K++ + H AA    D ++      IR 
Sbjct: 49  SSPRYR----FVKGDICDAELVDRL----FEEEKIDAVIHFAAESHVDRSISDPEPFIRT 100

Query: 154 NLYATKQMLNLAKECVNLKRF 174
           N+  T  +L  A++   +KRF
Sbjct: 101 NVLGTYTLLEAARKY-GVKRF 120

This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315

>gnl|CDD|187548 cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs

 Score = 39.9 bits (94), Expect = 3e-04
 Identities = 34/140 (24%), Positives = 66/140 (47%), Gaps = 25/140 (17%)

Query: 39  ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEV 98
           ILVTGG G +G  L+ ++L+       + +  RD+      E V+ + +    D+L   +
Sbjct: 5   ILVTGGAGSIGSELVRQILKF--GPKKLIVFDRDENKL--HELVRELRSRFPHDKLRFII 60

Query: 99  PDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRF----DEALQKAIRAN 154
            D R K +            L    ++      +I+FH AA+L+     ++  ++AI+ N
Sbjct: 61  GDVRDKER------------LRRAFKER---GPDIVFH-AAALKHVPSMEDNPEEAIKTN 104

Query: 155 LYATKQMLNLAKECVNLKRF 174
           +  TK +++ A E   +++F
Sbjct: 105 VLGTKNVIDAAIEN-GVEKF 123

UDP-Glcnac inverting 4,6-dehydratase was identified in Helicobacter pylori as the hexameric flaA1 gene product (FlaA1). FlaA1 is hexameric, possesses UDP-GlcNAc-inverting 4,6-dehydratase activity, and catalyzes the first step in the creation of a pseudaminic acid derivative in protein glycosylation. Although this subgroup has the NADP-binding motif characteristic of extended SDRs, its members tend to have a Met substituted for the active site Tyr found in most SDR families. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 287

>gnl|CDD|233775 TIGR02197, heptose_epim, ADP-L-glycero-D-manno-heptose-6-epimerase

 Score = 38.8 bits (91), Expect = 6e-04
 Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 31/132 (23%)

Query: 39  ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEV 98
           I+VTGG GF+G      L+++  + G   I+V D        +  N+ + VI D ++K  
Sbjct: 1   IIVTGGAGFIGS----NLVKALNERGITDILVVDNLRDG--HKFLNLADLVIADYIDK-- 52

Query: 99  PDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFH---CAASLRFDEALQKAIRANL 155
            DF          LE    G           K+  IFH   C+ +   D   +  +  N 
Sbjct: 53  EDF-------LDRLEKGAFG-----------KIEAIFHQGACSDTTETDG--EYMMENNY 92

Query: 156 YATKQMLNLAKE 167
             +K++L+   E
Sbjct: 93  QYSKRLLDWCAE 104

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 314

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 38.1 bits (89), Expect = 0.001
 Identities = 35/142 (24%), Positives = 54/142 (38%), Gaps = 44/142 (30%)

Query: 39  ILVTGGTGFMGKLLIDKLLRSFPDIGA-IYIMVRDKKGSSPEERVKNMLNSVIFDRLNKE 97
           +LVTG  GF+G+ L+DKLL      G  + I VR           +N   SV+      E
Sbjct: 2   VLVTGANGFIGRALVDKLLSR----GEEVRIAVR---------NAENAEPSVVLA----E 44

Query: 98  VPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAA-----SLRFDEALQKAIR 152
           +PD                     DS   +   V+ + H AA     + +  + L    +
Sbjct: 45  LPDI--------------------DSFTDLFLGVDAVVHLAARVHVMNDQGADPLSDYRK 84

Query: 153 ANLYATKQMLNLAKECVNLKRF 174
            N   T+++   A     +KRF
Sbjct: 85  VNTELTRRLARAAAR-QGVKRF 105

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|187559 cd05248, ADP_GME_SDR_e, ADP-L-glycero-D-mannoheptose 6-epimerase (GME), extended (e) SDRs

 Score = 36.9 bits (86), Expect = 0.003
 Identities = 33/132 (25%), Positives = 56/132 (42%), Gaps = 30/132 (22%)

Query: 39  ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEV 98
           I+VTGG GF+G  L+  L     + G   I+V D   +   E+ KN++   I D ++K+ 
Sbjct: 2   IIVTGGAGFIGSNLVKAL----NERGITDILVVDNLSN--GEKFKNLVGLKIADYIDKD- 54

Query: 99  PDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFH---CAASLRFDEALQKAIRANL 155
            DF+  ++                 +     K+  IFH   C+ +   D      +  N 
Sbjct: 55  -DFKDWVR-----------------KGDENFKIEAIFHQGACSDTTETDGKY--MMDNNY 94

Query: 156 YATKQMLNLAKE 167
             TK++L+   E
Sbjct: 95  QYTKELLHYCLE 106

This subgroup contains ADP-L-glycero-D-mannoheptose 6-epimerase, an extended SDR, which catalyzes the NAD-dependent interconversion of ADP-D-glycero-D-mannoheptose and ADP-L-glycero-D-mannoheptose. This subgroup has the canonical active site tetrad and NAD(P)-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 317

>gnl|CDD|224011 COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 36.9 bits (86), Expect = 0.003
 Identities = 29/151 (19%), Positives = 66/151 (43%), Gaps = 35/151 (23%)

Query: 33  FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFD 92
                 +LVTGG G +G  L  ++L+   +   I +  RD+                ++ 
Sbjct: 247 MLTGKTVLVTGGGGSIGSELCRQILKF--NPKEIILFSRDEYK--------------LYL 290

Query: 93  RLNKEVPDFRSKIQVIPSNLESEHLGLSEDSEQLIK----SKVNIIFHCAA-----SLRF 143
            ++ E+ +   ++++        ++G   D +++ +     KV+I+FH AA      + +
Sbjct: 291 -IDMELREKFPELKLRF------YIGDVRDRDRVERAMEGHKVDIVFHAAALKHVPLVEY 343

Query: 144 DEALQKAIRANLYATKQMLNLAKECVNLKRF 174
           +    +AI+ N+  T+ +   A +   +K+F
Sbjct: 344 NPE--EAIKTNVLGTENVAEAAIKN-GVKKF 371

Length = 588

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	177
PLN02996	491	fatty acyl-CoA reductase	99.87
PLN02503	605	fatty acyl-CoA reductase 2	99.86
KOG1502|consensus	327		99.84
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.83
KOG1221|consensus	467		99.82
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.79
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.79
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.78
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.75
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.74
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.74
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.74
PLN02214	342	cinnamoyl-CoA reductase	99.73
PLN00198	338	anthocyanidin reductase; Provisional	99.72
PLN02572	442	UDP-sulfoquinovose synthase	99.71
PLN02650	351	dihydroflavonol-4-reductase	99.7
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.7
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.7
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.7
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.69
CHL00194	317	ycf39 Ycf39; Provisional	99.68
PLN02427	386	UDP-apiose/xylose synthase	99.67
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.67
PLN02583	297	cinnamoyl-CoA reductase	99.66
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.66
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.66
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.65
PLN03209	576	translocon at the inner envelope of chloroplast su	99.65
KOG1371|consensus	343		99.64
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.64
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.64
PRK07201	657	short chain dehydrogenase; Provisional	99.63
PLN02653	340	GDP-mannose 4,6-dehydratase	99.63
PRK06128	300	oxidoreductase; Provisional	99.63
PLN02240	352	UDP-glucose 4-epimerase	99.62
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.62
PLN02260	668	probable rhamnose biosynthetic enzyme	99.62
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.61
PLN02686	367	cinnamoyl-CoA reductase	99.6
PLN02206	442	UDP-glucuronate decarboxylase	99.59
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.59
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.59
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.59
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.58
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.57
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.57
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.57
PRK06482	276	short chain dehydrogenase; Provisional	99.57
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.56
PRK06180	277	short chain dehydrogenase; Provisional	99.56
PRK06398	258	aldose dehydrogenase; Validated	99.56
PRK06182	273	short chain dehydrogenase; Validated	99.55
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.55
PRK05717	255	oxidoreductase; Validated	99.55
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.55
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.55
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.55
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.54
PRK06194	287	hypothetical protein; Provisional	99.54
PRK06179	270	short chain dehydrogenase; Provisional	99.54
PRK07985	294	oxidoreductase; Provisional	99.54
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.54
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.53
PRK05993	277	short chain dehydrogenase; Provisional	99.53
KOG1430|consensus	361		99.53
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.52
PRK07774	250	short chain dehydrogenase; Provisional	99.52
PRK07814	263	short chain dehydrogenase; Provisional	99.52
PLN02253	280	xanthoxin dehydrogenase	99.52
PRK08263	275	short chain dehydrogenase; Provisional	99.52
PRK07063	260	short chain dehydrogenase; Provisional	99.52
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.52
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.52
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.52
KOG1205|consensus	282		99.52
PRK12827	249	short chain dehydrogenase; Provisional	99.51
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.51
PRK06197	306	short chain dehydrogenase; Provisional	99.51
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.51
PRK05866	293	short chain dehydrogenase; Provisional	99.51
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.5
PRK06138	252	short chain dehydrogenase; Provisional	99.5
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.5
PRK06196	315	oxidoreductase; Provisional	99.5
PRK05865	854	hypothetical protein; Provisional	99.5
PRK07478	254	short chain dehydrogenase; Provisional	99.5
PRK12746	254	short chain dehydrogenase; Provisional	99.49
PRK06841	255	short chain dehydrogenase; Provisional	99.49
PRK08628	258	short chain dehydrogenase; Provisional	99.49
PRK06701	290	short chain dehydrogenase; Provisional	99.49
PRK05876	275	short chain dehydrogenase; Provisional	99.49
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.49
PRK08267	260	short chain dehydrogenase; Provisional	99.49
PLN02778	298	3,5-epimerase/4-reductase	99.49
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.49
PRK12939	250	short chain dehydrogenase; Provisional	99.49
PRK08226	263	short chain dehydrogenase; Provisional	99.49
PRK07775	274	short chain dehydrogenase; Provisional	99.48
PRK06523	260	short chain dehydrogenase; Provisional	99.48
PRK07067	257	sorbitol dehydrogenase; Provisional	99.48
PRK10538	248	malonic semialdehyde reductase; Provisional	99.48
PRK07890	258	short chain dehydrogenase; Provisional	99.48
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.48
PRK06914	280	short chain dehydrogenase; Provisional	99.48
PRK08265	261	short chain dehydrogenase; Provisional	99.48
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.47
PRK06114	254	short chain dehydrogenase; Provisional	99.47
PRK09291	257	short chain dehydrogenase; Provisional	99.47
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.47
PRK05854	313	short chain dehydrogenase; Provisional	99.47
PRK12828	239	short chain dehydrogenase; Provisional	99.47
PRK07856	252	short chain dehydrogenase; Provisional	99.47
PRK09135	249	pteridine reductase; Provisional	99.47
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.47
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.47
PRK12367	245	short chain dehydrogenase; Provisional	99.47
PRK06500	249	short chain dehydrogenase; Provisional	99.47
PRK08589	272	short chain dehydrogenase; Validated	99.47
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.47
PRK05867	253	short chain dehydrogenase; Provisional	99.47
PRK09186	256	flagellin modification protein A; Provisional	99.47
PRK08339	263	short chain dehydrogenase; Provisional	99.46
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.46
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.46
PRK07024	257	short chain dehydrogenase; Provisional	99.46
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.46
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.46
PRK07825	273	short chain dehydrogenase; Provisional	99.46
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.46
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.46
PRK07806	248	short chain dehydrogenase; Provisional	99.46
PRK08643	256	acetoin reductase; Validated	99.46
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.45
PRK08278	273	short chain dehydrogenase; Provisional	99.45
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.45
PRK06139	330	short chain dehydrogenase; Provisional	99.45
PRK09134	258	short chain dehydrogenase; Provisional	99.45
PRK07326	237	short chain dehydrogenase; Provisional	99.45
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.45
PRK05650	270	short chain dehydrogenase; Provisional	99.45
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.45
PRK12937	245	short chain dehydrogenase; Provisional	99.44
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.44
PRK05693	274	short chain dehydrogenase; Provisional	99.44
PRK12747	252	short chain dehydrogenase; Provisional	99.44
PRK06172	253	short chain dehydrogenase; Provisional	99.44
PRK07454	241	short chain dehydrogenase; Provisional	99.44
PRK12320	699	hypothetical protein; Provisional	99.44
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.44
PRK08251	248	short chain dehydrogenase; Provisional	99.44
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.44
PRK12743	256	oxidoreductase; Provisional	99.44
PRK12829	264	short chain dehydrogenase; Provisional	99.44
PRK07035	252	short chain dehydrogenase; Provisional	99.44
PRK07109	334	short chain dehydrogenase; Provisional	99.44
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.43
PRK07102	243	short chain dehydrogenase; Provisional	99.43
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.43
PRK07677	252	short chain dehydrogenase; Provisional	99.43
PRK07577	234	short chain dehydrogenase; Provisional	99.43
PRK06057	255	short chain dehydrogenase; Provisional	99.43
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.43
PRK08264	238	short chain dehydrogenase; Validated	99.43
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.43
PRK07060	245	short chain dehydrogenase; Provisional	99.42
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.42
PRK05875	276	short chain dehydrogenase; Provisional	99.42
PRK06181	263	short chain dehydrogenase; Provisional	99.42
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.42
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.42
PRK07062	265	short chain dehydrogenase; Provisional	99.42
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.42
PRK06101	240	short chain dehydrogenase; Provisional	99.42
PRK09242	257	tropinone reductase; Provisional	99.41
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.41
PRK05872	296	short chain dehydrogenase; Provisional	99.41
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.41
PRK09072	263	short chain dehydrogenase; Provisional	99.41
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.41
KOG1429|consensus	350		99.41
PRK07576	264	short chain dehydrogenase; Provisional	99.4
PRK07791	286	short chain dehydrogenase; Provisional	99.4
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.4
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.4
PRK12742	237	oxidoreductase; Provisional	99.4
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.4
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.4
PRK07904	253	short chain dehydrogenase; Provisional	99.39
PRK07074	257	short chain dehydrogenase; Provisional	99.39
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.39
PRK12744	257	short chain dehydrogenase; Provisional	99.39
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.38
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.38
PRK06484	520	short chain dehydrogenase; Validated	99.38
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.38
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.38
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.38
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.38
PRK06123	248	short chain dehydrogenase; Provisional	99.38
PRK07023	243	short chain dehydrogenase; Provisional	99.38
PRK08219	227	short chain dehydrogenase; Provisional	99.37
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.37
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.37
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.37
PRK06949	258	short chain dehydrogenase; Provisional	99.37
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.37
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.36
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.36
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.36
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.36
PRK06940	275	short chain dehydrogenase; Provisional	99.36
PRK08303	305	short chain dehydrogenase; Provisional	99.36
PRK06125	259	short chain dehydrogenase; Provisional	99.36
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.35
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.35
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.35
PRK06198	260	short chain dehydrogenase; Provisional	99.35
PRK08017	256	oxidoreductase; Provisional	99.34
PRK05884	223	short chain dehydrogenase; Provisional	99.34
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.34
PRK08703	239	short chain dehydrogenase; Provisional	99.34
PRK06953	222	short chain dehydrogenase; Provisional	99.34
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.34
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.34
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.33
PRK07201	657	short chain dehydrogenase; Provisional	99.33
KOG1201|consensus	300		99.33
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.33
PRK07069	251	short chain dehydrogenase; Validated	99.32
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.32
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.32
PRK06483	236	dihydromonapterin reductase; Provisional	99.32
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.31
PRK05855	582	short chain dehydrogenase; Validated	99.31
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.31
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.31
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.3
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.3
KOG1208|consensus	314		99.3
PRK06924	251	short chain dehydrogenase; Provisional	99.3
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.29
PRK08177	225	short chain dehydrogenase; Provisional	99.29
PRK06484	520	short chain dehydrogenase; Validated	99.29
PRK07041	230	short chain dehydrogenase; Provisional	99.28
PRK07832	272	short chain dehydrogenase; Provisional	99.28
PRK07831	262	short chain dehydrogenase; Provisional	99.27
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.27
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.27
PLN02780	320	ketoreductase/ oxidoreductase	99.27
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.27
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.27
PRK08324	681	short chain dehydrogenase; Validated	99.26
PLN02260	668	probable rhamnose biosynthetic enzyme	99.25
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.25
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.24
KOG4169|consensus	261		99.24
KOG0747|consensus	331		99.24
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.22
PRK08862	227	short chain dehydrogenase; Provisional	99.22
KOG2865|consensus	391		99.21
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.21
KOG0725|consensus	270		99.19
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.18
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.17
PRK07578	199	short chain dehydrogenase; Provisional	99.17
KOG1611|consensus	249		99.16
PLN00016	378	RNA-binding protein; Provisional	99.16
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.15
PLN00015	308	protochlorophyllide reductase	99.15
KOG1200|consensus	256		99.12
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.12
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.11
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.11
PRK05599	246	hypothetical protein; Provisional	99.09
KOG1207|consensus	245		99.07
COG1028	251	FabG Dehydrogenases with different specificities (	99.06
KOG1610|consensus	322		98.98
PRK06720	169	hypothetical protein; Provisional	98.94
KOG1209|consensus	289		98.86
PTZ00325	321	malate dehydrogenase; Provisional	98.83
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.81
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	98.8
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	98.8
KOG1199|consensus	260		98.75
KOG4039|consensus	238		98.75
KOG1210|consensus	331		98.74
PRK08309	177	short chain dehydrogenase; Provisional	98.72
COG2910	211	Putative NADH-flavin reductase [General function p	98.71
PLN00106	323	malate dehydrogenase	98.7
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	98.67
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.59
KOG1203|consensus	411		98.58
KOG1014|consensus	312		98.57
KOG1431|consensus	315		98.56
KOG1372|consensus	376		98.54
PRK09620	229	hypothetical protein; Provisional	98.53
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	98.4
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	98.39
KOG2774|consensus	366		98.34
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.34
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.34
KOG1478|consensus	341		98.3
PRK05086	312	malate dehydrogenase; Provisional	98.24
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.23
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	98.22
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.14
PRK14982	340	acyl-ACP reductase; Provisional	98.12
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.12
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	98.11
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	98.08
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.08
KOG2733|consensus	423		97.95
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.91
KOG4288|consensus	283		97.87
KOG1204|consensus	253		97.87
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	97.71
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.63
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	97.59
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.56
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.54
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.53
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	97.52
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	97.48
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	97.43
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	97.42
PRK05442	326	malate dehydrogenase; Provisional	97.36
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	97.33
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	97.23
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.11
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.1
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.08
COG3268	382	Uncharacterized conserved protein [Function unknow	97.07
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	97.01
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	97.01
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	96.99
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	96.9
PRK09496	453	trkA potassium transporter peripheral membrane com	96.9
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.88
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.84
PLN00112	444	malate dehydrogenase (NADP); Provisional	96.83
PTZ00117	319	malate dehydrogenase; Provisional	96.82
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.77
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	96.69
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.67
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.61
PLN02602	350	lactate dehydrogenase	96.59
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.57
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	96.56
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	96.55
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.5
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.47
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	96.47
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	96.47
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.46
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.46
PRK08223	287	hypothetical protein; Validated	96.41
PRK06223	307	malate dehydrogenase; Reviewed	96.4
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.39
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	96.38
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	96.33
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.3
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.28
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	96.27
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.27
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.27
PLN02383	344	aspartate semialdehyde dehydrogenase	96.23
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.18
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.17
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	96.12
PTZ00082	321	L-lactate dehydrogenase; Provisional	96.1
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	96.09
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.09
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.07
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.05
KOG1494|consensus	345		96.04
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.03
PRK09496	453	trkA potassium transporter peripheral membrane com	95.98
PRK13940	414	glutamyl-tRNA reductase; Provisional	95.96
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	95.94
PRK04148	134	hypothetical protein; Provisional	95.93
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	95.91
PRK00048	257	dihydrodipicolinate reductase; Provisional	95.9
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	95.87
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	95.86
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	95.84
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	95.79
KOG1198|consensus	347		95.76
PRK15116	268	sulfur acceptor protein CsdL; Provisional	95.69
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	95.67
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	95.65
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.63
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	95.59
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	95.58
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.57
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	95.55
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	95.53
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	95.51
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	95.49
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	95.47
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.46
PRK06153	393	hypothetical protein; Provisional	95.46
PRK08306	296	dipicolinate synthase subunit A; Reviewed	95.46
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.42
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	95.41
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	95.4
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	95.37
KOG1202|consensus	2376		95.33
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	95.32
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	95.3
PRK08328	231	hypothetical protein; Provisional	95.28
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	95.26
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	95.23
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	95.22
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.16
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	95.11
COG0240	329	GpsA Glycerol-3-phosphate dehydrogenase [Energy pr	95.11
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	95.1
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.07
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.03
PRK14180	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.01
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	95.0
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	94.97
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.94
PRK14177	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.9
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	94.88
PRK14173	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.85
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	94.78
PRK10669	558	putative cation:proton antiport protein; Provision	94.75
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	94.74
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.74
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	94.74
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	94.68
PRK14186	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.66
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	94.65
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	94.64
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	94.64
PRK07877	722	hypothetical protein; Provisional	94.62
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	94.6
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.58
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	94.57
KOG4022|consensus	236		94.57
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	94.51
PRK14169	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.49
PRK14170	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.48
COG0136	334	Asd Aspartate-semialdehyde dehydrogenase [Amino ac	94.47
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	94.46
PRK07411	390	hypothetical protein; Validated	94.44
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	94.43
PRK14187	294	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.43
PRK13243	333	glyoxylate reductase; Reviewed	94.36
PRK14183	281	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.36
PRK14166	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.35
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	94.33
PRK14851	679	hypothetical protein; Provisional	94.28
PLN00203	519	glutamyl-tRNA reductase	94.28
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	94.15
TIGR03693	637	ocin_ThiF_like putative thiazole-containing bacter	94.14
PRK14171	288	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.11
PRK14182	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.07
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	94.06
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	94.05
PRK14178	279	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.0
PLN02516	299	methylenetetrahydrofolate dehydrogenase (NADP+)	93.96
PF00070	80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	93.95
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	93.86
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	93.79
PRK06487	317	glycerate dehydrogenase; Provisional	93.76
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	93.75
PRK06932	314	glycerate dehydrogenase; Provisional	93.73
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	93.72
PRK03659	601	glutathione-regulated potassium-efflux system prot	93.65
PRK14193	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.61
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	93.58
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	93.56
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	93.56
PRK06849	389	hypothetical protein; Provisional	93.53
TIGR01745	366	asd_gamma aspartate-semialdehyde dehydrogenase, ga	93.53
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	93.49
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	93.46
PRK07574	385	formate dehydrogenase; Provisional	93.41
PRK06719	157	precorrin-2 dehydrogenase; Validated	93.4
PRK06436	303	glycerate dehydrogenase; Provisional	93.35
PLN02928	347	oxidoreductase family protein	93.34
PRK13304	265	L-aspartate dehydrogenase; Reviewed	93.33
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	93.32
PLN02616	364	tetrahydrofolate dehydrogenase/cyclohydrolase, put	93.29
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	93.29
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	93.25
PRK14181	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.21
PLN02897	345	tetrahydrofolate dehydrogenase/cyclohydrolase, put	93.2
PRK14184	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.16
cd01488	291	Uba3_RUB Ubiquitin activating enzyme (E1) subunit	93.15
PRK14167	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.09
PRK14852	989	hypothetical protein; Provisional	93.07
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	93.06
PRK14168	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.92
PRK07634	245	pyrroline-5-carboxylate reductase; Reviewed	92.92
PRK03562	621	glutathione-regulated potassium-efflux system prot	92.86
COG0289	266	DapB Dihydrodipicolinate reductase [Amino acid tra	92.86
PRK05562	223	precorrin-2 dehydrogenase; Provisional	92.85

>PLN02996 fatty acyl-CoA reductase

Probab=99.87  E-value=5.1e-21  Score=159.27  Aligned_cols=149  Identities=26%  Similarity=0.562  Sum_probs=119.1

Q ss_pred             cccccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHH-HHHhhhhhhcccccCccc-----C
Q psy17489         29 KVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVK-NMLNSVIFDRLNKEVPDF-----R  102 (177)
Q Consensus        29 ~~~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~  102 (177)
                      .+....+||+|+|||||||+|+++++.|++.++++.+|+++.|.+......+++. +......++.+.+..+..     .
T Consensus         4 ~i~~~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~   83 (491)
T PLN02996          4 SCVQFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLIS   83 (491)
T ss_pred             cHHHHhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhh
Confidence            3445678999999999999999999999988778889999999988777777765 343433443332222211     2


Q ss_pred             CCeEEEeCCCCCCCCCCCHHH-HHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        103 SKIQVIPSNLESEHLGLSEDS-EQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       103 ~~v~~~~~D~~~~~~~~~~~~-~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      .++.++.+|++++.+|++... +..+++++|+|||+||..+...+++.++++|+.++.+++++|++.+++++|||+
T Consensus        84 ~kv~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~v  159 (491)
T PLN02996         84 EKVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHV  159 (491)
T ss_pred             cCEEEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEE
Confidence            579999999999988887655 577788999999999998777777889999999999999999986578899985

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.86  E-value=1.4e-20  Score=158.68  Aligned_cols=147  Identities=33%  Similarity=0.591  Sum_probs=122.8

Q ss_pred             cccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHH-HHHhhhhhhcccccCccc-----CCC
Q psy17489         31 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVK-NMLNSVIFDRLNKEVPDF-----RSK  104 (177)
Q Consensus        31 ~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~~  104 (177)
                      ....++++|+|||||||+|++|+++|++.++++.+|+++.|.+......+++. ++.....++++.++.+..     ..+
T Consensus       114 ~~f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~K  193 (605)
T PLN02503        114 AEFLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSK  193 (605)
T ss_pred             hhhhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCcccccccccc
Confidence            45678999999999999999999999998778889999999887777777775 444455555554333221     467


Q ss_pred             eEEEeCCCCCCCCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        105 IQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       105 v~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      +.++.+|++++.+|++.+..+.+.+++|+|||+||...+..+++..+++|+.++.+++++|++.+++++|||+
T Consensus       194 i~~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~v  266 (605)
T PLN02503        194 LVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQV  266 (605)
T ss_pred             EEEEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEc
Confidence            9999999999999999888888888999999999998877778889999999999999999987568889885

>KOG1502|consensus

Probab=99.84  E-value=1.9e-20  Score=145.85  Aligned_cols=121  Identities=21%  Similarity=0.345  Sum_probs=99.5

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      .+++|+||||+||||+||++.|+++|   +.|++.+|++..+   +...++.+          .+....+...+..|+.+
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rG---Y~V~gtVR~~~~~---k~~~~L~~----------l~~a~~~l~l~~aDL~d   68 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRG---YTVRGTVRDPEDE---KKTEHLRK----------LEGAKERLKLFKADLLD   68 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCC---CEEEEEEcCcchh---hhHHHHHh----------cccCcccceEEeccccc
Confidence            57899999999999999999999999   5899999998653   22222211          12234568999999999


Q ss_pred             CCCCCCHHHHHHHhcCCcEEEEcCcccCchHH--HHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        115 EHLGLSEDSEQLIKSKVNIIFHCAASLRFDEA--LQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~--~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      +      +++..+++++|+|||.|.+..+...  ..+.+++.+.|+.|++++|++.+++|||||.
T Consensus        69 ~------~sf~~ai~gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~T  127 (327)
T KOG1502|consen   69 E------GSFDKAIDGCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYT  127 (327)
T ss_pred             c------chHHHHHhCCCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEe
Confidence            9      7999999999999999999765322  4478999999999999999999669999983

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.83  E-value=7.3e-21  Score=145.75  Aligned_cols=132  Identities=37%  Similarity=0.630  Sum_probs=91.2

Q ss_pred             EecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhh-hcccccCcccCCCeEEEeCCCCCCCCCC
Q psy17489         41 VTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIF-DRLNKEVPDFRSKIQVIPSNLESEHLGL  119 (177)
Q Consensus        41 VtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~D~~~~~~~~  119 (177)
                      |||||||+|++++.+|++.+..+ +|+|+.|.++.....+++.+.+.+..+ +...+   ....+++++.+|++++.+|+
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~-~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~---~~~~ri~~v~GDl~~~~lGL   76 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDV-KIYCLVRASSSQSALERLKDALKEYGLWDDLDK---EALSRIEVVEGDLSQPNLGL   76 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TT-EEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-H---HHTTTEEEEE--TTSGGGG-
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCc-EEEEEEeCcccccchhhhhhhcccccchhhhhh---hhhccEEEEeccccccccCC
Confidence            79999999999999999997544 999999987655555666544332221 11100   12479999999999999999


Q ss_pred             CHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        120 SEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       120 ~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      +.+.+..+.+.+|+|||+||..++..++..+.++|+.++.++++.|.+. +.++|+||
T Consensus        77 ~~~~~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~-~~~~~~~i  133 (249)
T PF07993_consen   77 SDEDYQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQG-KRKRFHYI  133 (249)
T ss_dssp             -HHHHHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSS-S---EEEE
T ss_pred             ChHHhhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhc-cCcceEEe
Confidence            9999999999999999999999998888889999999999999999987 55699885

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>KOG1221|consensus

Probab=99.82  E-value=2.2e-19  Score=145.91  Aligned_cols=148  Identities=40%  Similarity=0.717  Sum_probs=136.6

Q ss_pred             ccccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEe
Q psy17489         30 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIP  109 (177)
Q Consensus        30 ~~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  109 (177)
                      .....++|+++||||+||+|.-++++|++.-+++.++|.+.|.+.+....+++.....+..++++.+..++...++..+.
T Consensus         6 i~~f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~   85 (467)
T KOG1221|consen    6 IVQFYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIA   85 (467)
T ss_pred             HHHHhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecc
Confidence            34567899999999999999999999999877899999999999999999999999999999998887777788999999


Q ss_pred             CCCCCCCCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        110 SNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       110 ~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      ||++++.+|.+..+.+...+++|+|||+||.+.+.+..+....+|+.|+.++++.|++..+.+-||+|
T Consensus        86 GDi~~~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhV  153 (467)
T KOG1221|consen   86 GDISEPDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHV  153 (467)
T ss_pred             ccccCcccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEe
Confidence            99999999999888888888999999999999999999999999999999999999999888888876

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.79  E-value=5.5e-19  Score=137.57  Aligned_cols=112  Identities=22%  Similarity=0.322  Sum_probs=90.9

Q ss_pred             EEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCCCC
Q psy17489         40 LVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLGL  119 (177)
Q Consensus        40 lVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~  119 (177)
                      |||||+||+|++|+++|++.|+ ...|.++++........ .+.                 ......++.+|+++.    
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~-~~~Vr~~d~~~~~~~~~-~~~-----------------~~~~~~~~~~Di~d~----   57 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGY-IYEVRVLDRSPPPKFLK-DLQ-----------------KSGVKEYIQGDITDP----   57 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCC-ceEEEEcccccccccch-hhh-----------------cccceeEEEeccccH----
Confidence            6999999999999999999984 56888888866432110 000                 112334899999999    


Q ss_pred             CHHHHHHHhcCCcEEEEcCcccCch--HHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        120 SEDSEQLIKSKVNIIFHCAASLRFD--EALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       120 ~~~~~~~~~~~~d~vi~~aa~~~~~--~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                        +++..+++++|+|||+|++....  ...+.++++|+.|+.+++++|++. +++||||.
T Consensus        58 --~~l~~a~~g~d~V~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~-~VkrlVyt  114 (280)
T PF01073_consen   58 --ESLEEALEGVDVVFHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKA-GVKRLVYT  114 (280)
T ss_pred             --HHHHHHhcCCceEEEeCccccccCcccHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEE
Confidence              89999999999999999987653  356779999999999999999998 99999984

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.79  E-value=9.4e-19  Score=137.80  Aligned_cols=132  Identities=27%  Similarity=0.410  Sum_probs=115.9

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHh-hhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLN-SVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +++++||||||+|.+++..|+..- + .+|+|++|..+.+.+..++++.+. ...++..      ...+++.+.+|+..+
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~-~-~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~------~~~ri~vv~gDl~e~   72 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRS-D-AKVICLVRAQSDEAALARLEKTFDLYRHWDEL------SADRVEVVAGDLAEP   72 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcC-C-CcEEEEEecCCHHHHHHHHHHHhhhhhhhhhh------hcceEEEEecccccc
Confidence            579999999999999999999874 3 699999999887777788888776 3333322      347899999999999


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      .++++...+..+.+.+|.|||+||.++...++.++...|+.|+..+++.|... +.|.|.||
T Consensus        73 ~lGL~~~~~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~g-k~Kp~~yV  133 (382)
T COG3320          73 DLGLSERTWQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATG-KPKPLHYV  133 (382)
T ss_pred             cCCCCHHHHHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcC-CCceeEEE
Confidence            99999999999999999999999999988899999999999999999999997 88888886

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.78  E-value=1.2e-18  Score=143.04  Aligned_cols=140  Identities=21%  Similarity=0.363  Sum_probs=113.1

Q ss_pred             ccCCCCCccccccccccccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCC-hHHHHHHHHhhhhhhc
Q psy17489         15 DTALPESPIMQEEQKVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSS-PEERVKNMLNSVIFDR   93 (177)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~   93 (177)
                      ...+.+.+...+......+..||+|+||||+|.||+.+++++++.++  .+++.++|++.... .+.++.+.+.      
T Consensus       229 eDLLgR~pV~~d~~~i~~~~~gK~vLVTGagGSiGsel~~qil~~~p--~~i~l~~~~E~~~~~i~~el~~~~~------  300 (588)
T COG1086         229 EDLLGRPPVALDTELIGAMLTGKTVLVTGGGGSIGSELCRQILKFNP--KEIILFSRDEYKLYLIDMELREKFP------  300 (588)
T ss_pred             HHHhCCCCCCCCHHHHHhHcCCCEEEEeCCCCcHHHHHHHHHHhcCC--CEEEEecCchHHHHHHHHHHHhhCC------
Confidence            34455666666666777889999999999999999999999999875  89999999874321 1222222111      


Q ss_pred             ccccCcccCCCeEEEeCCCCCCCCCCCHHHHHHHhcC--CcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489         94 LNKEVPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSK--VNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus        94 ~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~--~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                              ..++.++-+|+.|.      +.+..++++  +|+|+|.||..++   ...+.+.+++|+.|+.|++++|.++
T Consensus       301 --------~~~~~~~igdVrD~------~~~~~~~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~  366 (588)
T COG1086         301 --------ELKLRFYIGDVRDR------DRVERAMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKN  366 (588)
T ss_pred             --------CcceEEEecccccH------HHHHHHHhcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHh
Confidence                    25788899999999      899999997  9999999998764   5677889999999999999999999


Q ss_pred             CCCCCceeC
Q psy17489        169 VNLKRFCEL  177 (177)
Q Consensus       169 ~~~~~~v~v  177 (177)
                       ++++||++
T Consensus       367 -~V~~~V~i  374 (588)
T COG1086         367 -GVKKFVLI  374 (588)
T ss_pred             -CCCEEEEE
Confidence             99999975

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.75  E-value=2.5e-17  Score=131.85  Aligned_cols=124  Identities=19%  Similarity=0.213  Sum_probs=93.6

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+|+||||+||||++|++.|++.|   .+|++++|......  ..+.+....     .   ......++.++.+|+.
T Consensus        13 ~~~~~vlVtGatGfiG~~lv~~L~~~g---~~V~~~d~~~~~~~--~~~~~~~~~-----~---~~~~~~~~~~~~~Di~   79 (348)
T PRK15181         13 LAPKRWLITGVAGFIGSGLLEELLFLN---QTVIGLDNFSTGYQ--HNLDDVRTS-----V---SEEQWSRFIFIQGDIR   79 (348)
T ss_pred             ccCCEEEEECCccHHHHHHHHHHHHCC---CEEEEEeCCCCcch--hhhhhhhhc-----c---ccccCCceEEEEccCC
Confidence            567899999999999999999999998   58999988643211  111111000     0   0001246889999999


Q ss_pred             CCCCCCCHHHHHHHhcCCcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        114 SEHLGLSEDSEQLIKSKVNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      +.      +.+..+++++|+|||+|+.....   ++...++++|+.++.+++++|++. ++++|||+
T Consensus        80 d~------~~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-~~~~~v~~  139 (348)
T PRK15181         80 KF------TDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDA-HVSSFTYA  139 (348)
T ss_pred             CH------HHHHHHhhCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEe
Confidence            97      67888889999999999975432   344567899999999999999998 89999985

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.74  E-value=1.3e-17  Score=127.78  Aligned_cols=110  Identities=20%  Similarity=0.311  Sum_probs=90.2

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+||||||.||||+|.+..|++.|   ..|++++.-..+..  +.+..                  ....++++|+.|. 
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G---~~vvV~DNL~~g~~--~~v~~------------------~~~~f~~gDi~D~-   56 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTG---HEVVVLDNLSNGHK--IALLK------------------LQFKFYEGDLLDR-   56 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCC---CeEEEEecCCCCCH--HHhhh------------------ccCceEEeccccH-
Confidence            589999999999999999999999   58888887554321  11110                  1158999999998 


Q ss_pred             CCCCHHHHHHHhc--CCcEEEEcCcccCchH---HHHHHHHHhHHHHHHHHHHHHhcCCCCCcee
Q psy17489        117 LGLSEDSEQLIKS--KVNIIFHCAASLRFDE---ALQKAIRANLYATKQMLNLAKECVNLKRFCE  176 (177)
Q Consensus       117 ~~~~~~~~~~~~~--~~d~vi~~aa~~~~~~---~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~  176 (177)
                           +.+.++|+  ++|.|||+||...+.+   .+.++++.|+.++.+|+++++++ ++++|||
T Consensus        57 -----~~L~~vf~~~~idaViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~-gv~~~vF  115 (329)
T COG1087          57 -----ALLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQT-GVKKFIF  115 (329)
T ss_pred             -----HHHHHHHHhcCCCEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHh-CCCEEEE
Confidence                 78888886  6999999999876544   45578999999999999999999 9999998

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.74  E-value=5e-17  Score=128.38  Aligned_cols=121  Identities=19%  Similarity=0.309  Sum_probs=91.8

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      ++++++||||+||||++++++|++.|   ++|++++|+....   ........          .....+++.++.+|+.+
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g---~~V~~~~r~~~~~---~~~~~~~~----------~~~~~~~~~~~~~Dl~~   66 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRG---YTVKATVRDPNDP---KKTEHLLA----------LDGAKERLHLFKANLLE   66 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCC---CEEEEEEcCCCch---hhHHHHHh----------ccCCCCceEEEeccccC
Confidence            47899999999999999999999999   5888888875321   11111110          00012478899999999


Q ss_pred             CCCCCCHHHHHHHhcCCcEEEEcCcccCc--hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        115 EHLGLSEDSEQLIKSKVNIIFHCAASLRF--DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~--~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      +      +.+..+++++|+|||+|+....  ......++++|+.++.+++++|.+..+++||||+
T Consensus        67 ~------~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~  125 (322)
T PLN02662         67 E------GSFDSVVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVT  125 (322)
T ss_pred             c------chHHHHHcCCCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEc
Confidence            8      6788889999999999997542  2222367899999999999999876478899985

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.74  E-value=5.2e-17  Score=128.52  Aligned_cols=121  Identities=21%  Similarity=0.320  Sum_probs=92.9

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      ++++++||||+||||++++++|++.|   .+|+++.|+....   +.+.+....          .....++.++.+|+++
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~---~~~~~~~~~----------~~~~~~~~~~~~Dl~~   67 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRG---YTVKATVRDLTDR---KKTEHLLAL----------DGAKERLKLFKADLLE   67 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEECCCcch---HHHHHHHhc----------cCCCCceEEEecCCCC
Confidence            57899999999999999999999999   5888888865432   122221110          0012468899999999


Q ss_pred             CCCCCCHHHHHHHhcCCcEEEEcCcccCc--hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        115 EHLGLSEDSEQLIKSKVNIIFHCAASLRF--DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~--~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      +      +.+..+++++|+|||+|+....  .......+++|+.++.+++++|++.++++||||+
T Consensus        68 ~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~  126 (322)
T PLN02986         68 E------SSFEQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILT  126 (322)
T ss_pred             c------chHHHHHhCCCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEe
Confidence            8      6888889999999999997532  2233457899999999999999986478999985

>PLN02214 cinnamoyl-CoA reductase

Probab=99.73  E-value=6.7e-17  Score=129.16  Aligned_cols=119  Identities=15%  Similarity=0.256  Sum_probs=93.4

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      ..++++++||||+||||+++++.|++.|   ++|++++|+...... ..+...             .....++.++.+|+
T Consensus         7 ~~~~~~vlVTGatGfIG~~l~~~L~~~G---~~V~~~~r~~~~~~~-~~~~~~-------------~~~~~~~~~~~~Dl   69 (342)
T PLN02214          7 SPAGKTVCVTGAGGYIASWIVKILLERG---YTVKGTVRNPDDPKN-THLREL-------------EGGKERLILCKADL   69 (342)
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCc---CEEEEEeCCchhhhH-HHHHHh-------------hCCCCcEEEEecCc
Confidence            3567899999999999999999999999   588988886532110 111111             00113578899999


Q ss_pred             CCCCCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        113 ESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      .+.      +.+..+++++|+|||+|+...  .++...+++|+.++.+++++|++. +++||||+
T Consensus        70 ~d~------~~~~~~~~~~d~Vih~A~~~~--~~~~~~~~~nv~gt~~ll~aa~~~-~v~r~V~~  125 (342)
T PLN02214         70 QDY------EALKAAIDGCDGVFHTASPVT--DDPEQMVEPAVNGAKFVINAAAEA-KVKRVVIT  125 (342)
T ss_pred             CCh------HHHHHHHhcCCEEEEecCCCC--CCHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEe
Confidence            998      788888999999999999753  346678999999999999999998 88999984

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.72  E-value=1.1e-16  Score=127.58  Aligned_cols=120  Identities=23%  Similarity=0.377  Sum_probs=90.6

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      ++++++||||+||||+++++.|++.|   ++|++++|+....   ........      +    . ..+++.++.+|+++
T Consensus         8 ~~~~vlItG~~GfIG~~l~~~L~~~g---~~V~~~~r~~~~~---~~~~~~~~------~----~-~~~~~~~~~~Dl~d   70 (338)
T PLN00198          8 GKKTACVIGGTGFLASLLIKLLLQKG---YAVNTTVRDPENQ---KKIAHLRA------L----Q-ELGDLKIFGADLTD   70 (338)
T ss_pred             CCCeEEEECCchHHHHHHHHHHHHCC---CEEEEEECCCCCH---HHHHHHHh------c----C-CCCceEEEEcCCCC
Confidence            47899999999999999999999998   5888888865321   11111000      0    0 11368889999999


Q ss_pred             CCCCCCHHHHHHHhcCCcEEEEcCcccCch--HHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        115 EHLGLSEDSEQLIKSKVNIIFHCAASLRFD--EALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~--~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      .      +.+..+++++|+|||+|+.....  .....++++|+.++.++++++.+.+++++|||+
T Consensus        71 ~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~  129 (338)
T PLN00198         71 E------ESFEAPIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILT  129 (338)
T ss_pred             h------HHHHHHHhcCCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEe
Confidence            8      67888889999999999975432  233457799999999999999886468899984

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.71  E-value=5.1e-16  Score=127.97  Aligned_cols=125  Identities=14%  Similarity=0.101  Sum_probs=90.1

Q ss_pred             cccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCC-C-------h------HHHHHHHHhhhhhhcccc
Q psy17489         31 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGS-S-------P------EERVKNMLNSVIFDRLNK   96 (177)
Q Consensus        31 ~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~-~-------~------~~~~~~~~~~~~~~~~~~   96 (177)
                      +...++|+|+||||+||||++|++.|++.|   +.|+++++..... .       .      .+.+.....         
T Consensus        42 ~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G---~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---------  109 (442)
T PLN02572         42 SSSSKKKKVMVIGGDGYCGWATALHLSKRG---YEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKE---------  109 (442)
T ss_pred             CccccCCEEEEECCCcHHHHHHHHHHHHCC---CeEEEEeccccccccccccccccccccchHHHHHHHHH---------
Confidence            456788999999999999999999999999   5788876532110 0       0      011111100         


Q ss_pred             cCcccCCCeEEEeCCCCCCCCCCCHHHHHHHhc--CCcEEEEcCcccCch------HHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489         97 EVPDFRSKIQVIPSNLESEHLGLSEDSEQLIKS--KVNIIFHCAASLRFD------EALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus        97 ~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~--~~d~vi~~aa~~~~~------~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                         ....++.++.+|+.+.      +.+..+++  ++|+|||+|+.....      ..++..+++|+.++.+++++|++.
T Consensus       110 ---~~~~~v~~v~~Dl~d~------~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~  180 (442)
T PLN02572        110 ---VSGKEIELYVGDICDF------EFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEF  180 (442)
T ss_pred             ---hhCCcceEEECCCCCH------HHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHh
Confidence               0113688999999998      77888887  589999999864321      223456789999999999999998


Q ss_pred             CCCC-CceeC
Q psy17489        169 VNLK-RFCEL  177 (177)
Q Consensus       169 ~~~~-~~v~v  177 (177)
                       +++ +|||+
T Consensus       181 -gv~~~~V~~  189 (442)
T PLN02572        181 -APDCHLVKL  189 (442)
T ss_pred             -CCCccEEEE
Confidence             775 88874

>PLN02650 dihydroflavonol-4-reductase

Probab=99.70  E-value=2.1e-16  Score=126.51  Aligned_cols=121  Identities=21%  Similarity=0.382  Sum_probs=91.3

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      ..++|+||||+||||+++++.|++.|   .+|++++|+....   ..+.....          ......++.++.+|+.+
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G---~~V~~~~r~~~~~---~~~~~~~~----------~~~~~~~~~~v~~Dl~d   67 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERG---YTVRATVRDPANV---KKVKHLLD----------LPGATTRLTLWKADLAV   67 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCC---CEEEEEEcCcchh---HHHHHHHh----------ccCCCCceEEEEecCCC
Confidence            35789999999999999999999998   5899888865321   11111111          00011357889999999


Q ss_pred             CCCCCCHHHHHHHhcCCcEEEEcCcccCch--HHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        115 EHLGLSEDSEQLIKSKVNIIFHCAASLRFD--EALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~--~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      .      +.+..+++++|+|||+|+.....  ......+++|+.++.+++++|.+.+.++||||+
T Consensus        68 ~------~~~~~~~~~~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~  126 (351)
T PLN02650         68 E------GSFDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFT  126 (351)
T ss_pred             h------hhHHHHHhCCCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEe
Confidence            8      67888889999999999975432  233467899999999999999987347899985

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.70  E-value=1.8e-17  Score=128.08  Aligned_cols=117  Identities=26%  Similarity=0.414  Sum_probs=81.3

Q ss_pred             EEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCe----EEEeCCCCC
Q psy17489         39 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKI----QVIPSNLES  114 (177)
Q Consensus        39 vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v----~~~~~D~~~  114 (177)
                      ||||||+|.||+.|+++|++.++  ..++++++++...   -.+.+.+.        +..+  ..++    ..+.+|+.|
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p--~~lil~d~~E~~l---~~l~~~l~--------~~~~--~~~v~~~~~~vigDvrd   65 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGP--KKLILFDRDENKL---YELERELR--------SRFP--DPKVRFEIVPVIGDVRD   65 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB---SEEEEEES-HHHH---HHHHHHCH--------HHC----TTCEEEEE--CTSCCH
T ss_pred             CEEEccccHHHHHHHHHHHhcCC--CeEEEeCCChhHH---HHHHHHHh--------hccc--ccCcccccCceeecccC
Confidence            79999999999999999999876  7999999976321   11221111        0001  1234    345789999


Q ss_pred             CCCCCCHHHHHHHhc--CCcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        115 EHLGLSEDSEQLIKS--KVNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~--~~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      .      +.+..+++  ++|+|||.||..+.   ...+.+++++|+.|+.|++++|.++ ++++||+|
T Consensus        66 ~------~~l~~~~~~~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~-~v~~~v~I  126 (293)
T PF02719_consen   66 K------ERLNRIFEEYKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEH-GVERFVFI  126 (293)
T ss_dssp             H------HHHHHHTT--T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHT-T-SEEEEE
T ss_pred             H------HHHHHHHhhcCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEc
Confidence            8      78999998  89999999998764   3556778999999999999999999 99999985

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.70  E-value=3.5e-16  Score=124.18  Aligned_cols=119  Identities=23%  Similarity=0.366  Sum_probs=91.9

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+||||+++++.|++.|. ..+|++++|+...  . ..+.+..              ...++.++.+|+.
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~-~~~V~~~~r~~~~--~-~~~~~~~--------------~~~~~~~v~~Dl~   63 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYN-PKKIIIYSRDELK--Q-WEMQQKF--------------PAPCLRFFIGDVR   63 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCC-CcEEEEEcCChhH--H-HHHHHHh--------------CCCcEEEEEccCC
Confidence            4689999999999999999999999862 2478888876421  1 1111111              0146889999999


Q ss_pred             CCCCCCCHHHHHHHhcCCcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        114 SEHLGLSEDSEQLIKSKVNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      |.      +.+..+++++|+|||+||....   ..+...++++|+.++.+++++|.+. ++++|||+
T Consensus        64 d~------~~l~~~~~~iD~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~-~~~~iV~~  123 (324)
T TIGR03589        64 DK------ERLTRALRGVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDN-GVKRVVAL  123 (324)
T ss_pred             CH------HHHHHHHhcCCEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEE
Confidence            98      7888889999999999997532   2234568999999999999999998 88899975

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.70  E-value=4.9e-16  Score=123.05  Aligned_cols=121  Identities=20%  Similarity=0.307  Sum_probs=91.9

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      .+|+++||||+||||+++++.|++.|   ++|++++|+....   .........          .....++.++.+|+++
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G---~~V~~~~r~~~~~---~~~~~~~~~----------~~~~~~~~~~~~D~~d   67 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRG---YTINATVRDPKDR---KKTDHLLAL----------DGAKERLKLFKADLLD   67 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCC---CEEEEEEcCCcch---hhHHHHHhc----------cCCCCceEEEeCCCCC
Confidence            46899999999999999999999999   5788888775322   111111110          0012468899999999


Q ss_pred             CCCCCCHHHHHHHhcCCcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        115 EHLGLSEDSEQLIKSKVNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      .      +.+..+++++|+|||+||....   ...+...+++|+.++.+++++|.+..++++||++
T Consensus        68 ~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~  127 (325)
T PLN02989         68 E------GSFELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILT  127 (325)
T ss_pred             c------hHHHHHHcCCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEe
Confidence            8      6788888999999999997532   2345678899999999999999885357789874

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.69  E-value=4.8e-16  Score=124.10  Aligned_cols=134  Identities=27%  Similarity=0.405  Sum_probs=102.2

Q ss_pred             eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCC
Q psy17489         38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHL  117 (177)
Q Consensus        38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~  117 (177)
                      +|+||||+||||+++++.|++.|+. .+|++++|+.......+++.+.+....+...    .....++.++.+|++++.+
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~-~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~v~~~~~D~~~~~~   75 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQ-AKVICLVRAASEEHAMERLREALRSYRLWQE----DLARERIEVVAGDLSEPRL   75 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCC-CEEEEEEccCCHHHHHHHHHHHHHHhCCCCc----hhhhCCEEEEeCCcCcccC
Confidence            5899999999999999999999742 4799999976533233344443332111100    0001478999999999888


Q ss_pred             CCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        118 GLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       118 ~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      ++..+.+..+.+++|+|||+|+......++..+.++|+.++.+++++|.+. ++++|||+
T Consensus        76 gl~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~-~~~~~v~i  134 (367)
T TIGR01746        76 GLSDAEWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASG-RAKPLHYV  134 (367)
T ss_pred             CcCHHHHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhC-CCceEEEE
Confidence            877778888888999999999987766667778899999999999999997 78888875

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.68  E-value=4.8e-16  Score=123.00  Aligned_cols=108  Identities=19%  Similarity=0.250  Sum_probs=87.6

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+|+||||+||+|+++++.|++.|   ++|++++|+....   ..+.                  ..+++++.+|+.++ 
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g---~~V~~l~R~~~~~---~~l~------------------~~~v~~v~~Dl~d~-   55 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEG---YQVRCLVRNLRKA---SFLK------------------EWGAELVYGDLSLP-   55 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCC---CeEEEEEcChHHh---hhHh------------------hcCCEEEECCCCCH-
Confidence            589999999999999999999999   5899999974211   1001                  13688999999998 


Q ss_pred             CCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        117 LGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       117 ~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                           +.+..+++++|+|||+++...  .+...+.++|+.++.+++++|++. +++||||+
T Consensus        56 -----~~l~~al~g~d~Vi~~~~~~~--~~~~~~~~~~~~~~~~l~~aa~~~-gvkr~I~~  108 (317)
T CHL00194         56 -----ETLPPSFKGVTAIIDASTSRP--SDLYNAKQIDWDGKLALIEAAKAA-KIKRFIFF  108 (317)
T ss_pred             -----HHHHHHHCCCCEEEECCCCCC--CCccchhhhhHHHHHHHHHHHHHc-CCCEEEEe
Confidence                 788999999999999986432  233446789999999999999998 99999985

>PLN02427 UDP-apiose/xylose synthase

Probab=99.67  E-value=7.6e-16  Score=124.86  Aligned_cols=120  Identities=18%  Similarity=0.263  Sum_probs=88.5

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      .+.|+|+||||+||||+++++.|++.|.  .+|++++|+...      ..++....        ......+++++.+|+.
T Consensus        12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g--~~V~~l~r~~~~------~~~l~~~~--------~~~~~~~~~~~~~Dl~   75 (386)
T PLN02427         12 IKPLTICMIGAGGFIGSHLCEKLMTETP--HKVLALDVYNDK------IKHLLEPD--------TVPWSGRIQFHRINIK   75 (386)
T ss_pred             ccCcEEEEECCcchHHHHHHHHHHhcCC--CEEEEEecCchh------hhhhhccc--------cccCCCCeEEEEcCCC
Confidence            4567999999999999999999999831  588888876421      11111000        0001246899999999


Q ss_pred             CCCCCCCHHHHHHHhcCCcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        114 SEHLGLSEDSEQLIKSKVNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      +.      +.+..+++++|+|||+|+.....   .+..+.+..|+.++.+++++|++. + +||||+
T Consensus        76 d~------~~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~-~-~r~v~~  134 (386)
T PLN02427         76 HD------SRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN-N-KRLIHF  134 (386)
T ss_pred             Ch------HHHHHHhhcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhc-C-CEEEEE
Confidence            98      78888889999999999975421   223345678999999999999987 5 789874

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.67  E-value=5.2e-16  Score=118.65  Aligned_cols=118  Identities=20%  Similarity=0.315  Sum_probs=93.0

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |++|||||.||||++.+..+++...+ .+|++++.-...... +.+....              ..++..|+++|++|. 
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d-~~v~~~DkLTYAgn~-~~l~~~~--------------~~~~~~fv~~DI~D~-   63 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPD-DHVVNLDKLTYAGNL-ENLADVE--------------DSPRYRFVQGDICDR-   63 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCC-ceEEEEecccccCCH-HHHHhhh--------------cCCCceEEeccccCH-
Confidence            57999999999999999999998654 578888875433222 2222221              236899999999998 


Q ss_pred             CCCCHHHHHHHhc--CCcEEEEcCcccCchHH---HHHHHHHhHHHHHHHHHHHHhcCCC-CCceeC
Q psy17489        117 LGLSEDSEQLIKS--KVNIIFHCAASLRFDEA---LQKAIRANLYATKQMLNLAKECVNL-KRFCEL  177 (177)
Q Consensus       117 ~~~~~~~~~~~~~--~~d~vi~~aa~~~~~~~---~~~~~~~nv~~~~~ll~~~~~~~~~-~~~v~v  177 (177)
                           +.+.++++  .+|+|+|+||-.++..+   ++.++++|+.|+.+|+++++++ .. .||++|
T Consensus        64 -----~~v~~~~~~~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~-~~~frf~HI  124 (340)
T COG1088          64 -----ELVDRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKY-WGKFRFHHI  124 (340)
T ss_pred             -----HHHHHHHHhcCCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHh-cccceEEEe
Confidence                 78888888  68999999998876544   4568999999999999999998 44 488875

>PLN02583 cinnamoyl-CoA reductase

Probab=99.66  E-value=1.9e-15  Score=118.64  Aligned_cols=120  Identities=13%  Similarity=0.157  Sum_probs=90.9

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +++++||||+||||+++++.|++.|   ++|++++|+.........+..+             .....++.++.+|+++.
T Consensus         6 ~k~vlVTGatG~IG~~lv~~Ll~~G---~~V~~~~R~~~~~~~~~~~~~l-------------~~~~~~~~~~~~Dl~d~   69 (297)
T PLN02583          6 SKSVCVMDASGYVGFWLVKRLLSRG---YTVHAAVQKNGETEIEKEIRGL-------------SCEEERLKVFDVDPLDY   69 (297)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCC---CEEEEEEcCchhhhHHHHHHhc-------------ccCCCceEEEEecCCCH
Confidence            5789999999999999999999999   5888888864322111111111             00124688899999998


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                            +.+..++.++|.|+|.++.... ...++.++++|+.++.+++++|.+..+++|||++
T Consensus        70 ------~~~~~~l~~~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~  126 (297)
T PLN02583         70 ------HSILDALKGCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFT  126 (297)
T ss_pred             ------HHHHHHHcCCCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEe
Confidence                  7888899999999998765432 2335678999999999999999886468899974

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.66  E-value=1.4e-15  Score=121.62  Aligned_cols=111  Identities=14%  Similarity=0.227  Sum_probs=84.8

Q ss_pred             ceEEEecCCcchHHHHHHHHHhh-CCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRS-FPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~-g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      |+|+||||+||||++|++.|++. |   .+|++++|+..      ......              ....+.++.+|+.+.
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~---~~V~~~~r~~~------~~~~~~--------------~~~~~~~~~~Dl~~~   58 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTD---WEVYGMDMQTD------RLGDLV--------------NHPRMHFFEGDITIN   58 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCC---CeEEEEeCcHH------HHHHhc--------------cCCCeEEEeCCCCCC
Confidence            68999999999999999999986 5   58999887541      111111              114688999999833


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      .     +.+..+++++|+|||+|+....   ..+....+++|+.++.+++++|++. + ++|||+
T Consensus        59 ~-----~~~~~~~~~~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~-~-~~~v~~  116 (347)
T PRK11908         59 K-----EWIEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY-G-KHLVFP  116 (347)
T ss_pred             H-----HHHHHHHcCCCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhc-C-CeEEEE
Confidence            1     5667778899999999997542   2344567899999999999999997 6 699885

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.66  E-value=1.8e-15  Score=121.28  Aligned_cols=119  Identities=24%  Similarity=0.327  Sum_probs=88.6

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      ..+|+|+||||+||||+++++.|++.|   .+|++++|+...  . ..+....            . ...++.++.+|+.
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G---~~V~~~~r~~~~--~-~~~~~~~------------~-~~~~~~~~~~Dl~   68 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRG---YTVHATLRDPAK--S-LHLLSKW------------K-EGDRLRLFRADLQ   68 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCChHH--H-HHHHHhh------------c-cCCeEEEEECCCC
Confidence            467899999999999999999999999   588888876421  1 1111110            0 1246889999999


Q ss_pred             CCCCCCCHHHHHHHhcCCcEEEEcCcccCch-----HHHH-----HHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        114 SEHLGLSEDSEQLIKSKVNIIFHCAASLRFD-----EALQ-----KAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~-----~~~~-----~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      +.      +.+..+++++|+|||+|+.....     .+..     +.+++|+.++.+++++|++.+++++|||+
T Consensus        69 ~~------~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~  136 (353)
T PLN02896         69 EE------GSFDEAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFT  136 (353)
T ss_pred             CH------HHHHHHHcCCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEE
Confidence            98      77888888999999999975421     1222     34566679999999999887458899874

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.65  E-value=2.8e-15  Score=120.01  Aligned_cols=119  Identities=24%  Similarity=0.281  Sum_probs=90.3

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      ++||+++||||+||||+++++.|++.|   ++|++++|+.....   ...+...             ...++.++.+|+.
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G---~~V~~~~r~~~~~~---~~~~~~~-------------~~~~~~~~~~Dl~   62 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELG---AEVYGYSLDPPTSP---NLFELLN-------------LAKKIEDHFGDIR   62 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCC---CEEEEEeCCCccch---hHHHHHh-------------hcCCceEEEccCC
Confidence            468999999999999999999999999   58888888754321   1111000             0135778899999


Q ss_pred             CCCCCCCHHHHHHHhc--CCcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        114 SEHLGLSEDSEQLIKS--KVNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~--~~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      +.      +.+..+++  ++|+|||+||....   ..++...+++|+.++.++++++++.+.+++|||+
T Consensus        63 ~~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~  125 (349)
T TIGR02622        63 DA------AKLRKAIAEFKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNV  125 (349)
T ss_pred             CH------HHHHHHHhhcCCCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEE
Confidence            98      77888877  46999999996432   2345668899999999999999887337889874

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.65  E-value=3.3e-15  Score=124.82  Aligned_cols=131  Identities=18%  Similarity=0.237  Sum_probs=95.3

Q ss_pred             cccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489         31 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS  110 (177)
Q Consensus        31 ~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  110 (177)
                      .++.+|++++||||+|+||.+++++|++.|   ++|++++|+....   ..+...+....++   .+-.....++.++.+
T Consensus        75 ~~~~~gKvVLVTGATGgIG~aLAr~LLk~G---~~Vval~Rn~ekl---~~l~~~l~~~~L~---~~Ga~~~~~v~iV~g  145 (576)
T PLN03209         75 LDTKDEDLAFVAGATGKVGSRTVRELLKLG---FRVRAGVRSAQRA---ESLVQSVKQMKLD---VEGTQPVEKLEIVEC  145 (576)
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCC---CeEEEEeCCHHHH---HHHHHHhhhhccc---cccccccCceEEEEe
Confidence            345578999999999999999999999999   5889998875321   1111111100000   000001135889999


Q ss_pred             CCCCCCCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        111 NLESEHLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       111 D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      |+.+.      +.+..+++++|+|||++|.... ..++...+++|+.++.++++++... +++||||+
T Consensus       146 DLtD~------esI~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~a-gVgRIV~V  206 (576)
T PLN03209        146 DLEKP------DQIGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVA-KVNHFILV  206 (576)
T ss_pred             cCCCH------HHHHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHh-CCCEEEEE
Confidence            99997      7888889999999999987532 1245567899999999999999998 89999985

>KOG1371|consensus

Probab=99.64  E-value=1.9e-15  Score=116.91  Aligned_cols=119  Identities=22%  Similarity=0.291  Sum_probs=94.1

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC-CCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK-KGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      +++||||||.||||+|.+.+|++.|+   .|++++.-. .......+++++..             ...++.++++|++|
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy---~v~~vDNl~n~~~~sl~r~~~l~~-------------~~~~v~f~~~Dl~D   65 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGY---GVVIVDNLNNSYLESLKRVRQLLG-------------EGKSVFFVEGDLND   65 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCC---cEEEEecccccchhHHHHHHHhcC-------------CCCceEEEEeccCC
Confidence            57999999999999999999999995   677766532 22223344444322             13689999999999


Q ss_pred             CCCCCCHHHHHHHhc--CCcEEEEcCcccCchHH---HHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        115 EHLGLSEDSEQLIKS--KVNIIFHCAASLRFDEA---LQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~--~~d~vi~~aa~~~~~~~---~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      .      +.++++|+  .+|.|+|+|+.....++   +..++..|+.++.++++.++++ +++.+||.
T Consensus        66 ~------~~L~kvF~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~-~~~~~V~s  126 (343)
T KOG1371|consen   66 A------EALEKLFSEVKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAH-NVKALVFS  126 (343)
T ss_pred             H------HHHHHHHhhcCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHc-CCceEEEe
Confidence            8      78999987  68999999998765433   4468899999999999999999 69999973

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.64  E-value=4.3e-15  Score=118.63  Aligned_cols=122  Identities=17%  Similarity=0.203  Sum_probs=87.5

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+++||||+||||+++++.|++.|   .+|++++|+...... ..+......     .   ......++.++.+|++|. 
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G---~~V~~~~r~~~~~~~-~~~~~~~~~-----~---~~~~~~~~~~~~~Dl~d~-   67 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKG---YEVHGLIRRSSSFNT-QRIEHIYED-----P---HNVNKARMKLHYGDLTDS-   67 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCC---CEEEEEecCCcccch-hhhhhhhhc-----c---ccccccceeEEEeccCCH-
Confidence            589999999999999999999999   589999887532110 112211110     0   000124688999999998 


Q ss_pred             CCCCHHHHHHHhcC--CcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhcCCCC---CceeC
Q psy17489        117 LGLSEDSEQLIKSK--VNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKECVNLK---RFCEL  177 (177)
Q Consensus       117 ~~~~~~~~~~~~~~--~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~~~~~---~~v~v  177 (177)
                           +.+..+++.  +|+|||+|+..+..   ......+++|+.++.+++++|++. +++   +|||+
T Consensus        68 -----~~l~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~-~~~~~~~~v~~  130 (343)
T TIGR01472        68 -----SNLRRIIDEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTL-GLIKSVKFYQA  130 (343)
T ss_pred             -----HHHHHHHHhCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHh-CCCcCeeEEEe
Confidence                 778888874  69999999975432   223456788999999999999987 543   78774

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.64  E-value=3.3e-15  Score=120.68  Aligned_cols=112  Identities=18%  Similarity=0.142  Sum_probs=86.9

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      ++|+|+||||+||||+++++.|.+.|   ++|++++|.....     +.                .......++.+|+.+
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G---~~V~~v~r~~~~~-----~~----------------~~~~~~~~~~~Dl~d   75 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEG---HYIIASDWKKNEH-----MS----------------EDMFCHEFHLVDLRV   75 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCC---CEEEEEEeccccc-----cc----------------cccccceEEECCCCC
Confidence            67899999999999999999999998   5899998864210     00                000125678899998


Q ss_pred             CCCCCCHHHHHHHhcCCcEEEEcCcccCc----hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        115 EHLGLSEDSEQLIKSKVNIIFHCAASLRF----DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~----~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      .      +.+..++.++|+|||+|+..+.    .......+..|+.++.+++++|++. ++++|||+
T Consensus        76 ~------~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~-~vk~~V~~  135 (370)
T PLN02695         76 M------ENCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARIN-GVKRFFYA  135 (370)
T ss_pred             H------HHHHHHHhCCCEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHh-CCCEEEEe
Confidence            7      6777778899999999986531    1223445788999999999999998 89999984

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.63  E-value=2.3e-15  Score=129.50  Aligned_cols=121  Identities=24%  Similarity=0.378  Sum_probs=93.6

Q ss_pred             ceEEEecCCcchHHHHHHHHHh--hCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLR--SFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~--~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      |+|+||||+||||+++++.|++  .|   .+|++++|+...    ..+......         .  ...+++++.+|+.+
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g---~~V~~l~R~~~~----~~~~~~~~~---------~--~~~~v~~~~~Dl~~   62 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRRE---ATVHVLVRRQSL----SRLEALAAY---------W--GADRVVPLVGDLTE   62 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCC---CEEEEEECcchH----HHHHHHHHh---------c--CCCcEEEEecccCC
Confidence            4799999999999999999994  55   689999995422    222222110         0  01468899999999


Q ss_pred             CCCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        115 EHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      +..+...+.++.+ +++|+|||+||..+...+.....++|+.++.+++++|++. ++++|||+
T Consensus        63 ~~~~~~~~~~~~l-~~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~-~~~~~v~~  123 (657)
T PRK07201         63 PGLGLSEADIAEL-GDIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERL-QAATFHHV  123 (657)
T ss_pred             ccCCcCHHHHHHh-cCCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhc-CCCeEEEE
Confidence            7665555666666 8999999999987655566678899999999999999998 88999985

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.63  E-value=5.7e-15  Score=117.75  Aligned_cols=124  Identities=15%  Similarity=0.146  Sum_probs=89.6

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+||||+++++.|++.|   .+|++++|++..... ..+......         ......++.++.+|+.
T Consensus         4 ~~~~~vlVTGatGfiG~~l~~~L~~~G---~~V~~~~r~~~~~~~-~~~~~~~~~---------~~~~~~~~~~~~~Dl~   70 (340)
T PLN02653          4 PPRKVALITGITGQDGSYLTEFLLSKG---YEVHGIIRRSSNFNT-QRLDHIYID---------PHPNKARMKLHYGDLS   70 (340)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHCC---CEEEEEecccccccc-cchhhhccc---------cccccCceEEEEecCC
Confidence            568899999999999999999999999   589988886532110 111111000         0001245889999999


Q ss_pred             CCCCCCCHHHHHHHhc--CCcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhcCCCC-----CceeC
Q psy17489        114 SEHLGLSEDSEQLIKS--KVNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKECVNLK-----RFCEL  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~--~~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~~~~~-----~~v~v  177 (177)
                      +.      +.+..+++  ++|+|||+|+.....   ..+...+++|+.++.+++++|.+. +++     +|||+
T Consensus        71 d~------~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~-~~~~~~~~~~v~~  137 (340)
T PLN02653         71 DA------SSLRRWLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLH-GQETGRQIKYYQA  137 (340)
T ss_pred             CH------HHHHHHHHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHh-ccccccceeEEEe
Confidence            98      67877777  479999999975432   334556799999999999999987 654     77764

>PRK06128 oxidoreductase; Provisional

Probab=99.63  E-value=3.2e-14  Score=111.73  Aligned_cols=123  Identities=15%  Similarity=0.164  Sum_probs=86.8

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   .+|++..++...... +.+.+....            ...++.++.+|+
T Consensus        52 ~l~~k~vlITGas~gIG~~~a~~l~~~G---~~V~i~~~~~~~~~~-~~~~~~~~~------------~~~~~~~~~~Dl  115 (300)
T PRK06128         52 RLQGRKALITGADSGIGRATAIAFAREG---ADIALNYLPEEEQDA-AEVVQLIQA------------EGRKAVALPGDL  115 (300)
T ss_pred             ccCCCEEEEecCCCcHHHHHHHHHHHcC---CEEEEEeCCcchHHH-HHHHHHHHH------------cCCeEEEEecCC
Confidence            4678999999999999999999999999   577776664422111 222222111            124677899999


Q ss_pred             CCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHhc-CCCCCcee
Q psy17489        113 ESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKEC-VNLKRFCE  176 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~  176 (177)
                      ++.      +++..++       .++|++|||||...        ..+.++..+++|+.++.++++.+... ..-.+||+
T Consensus       116 ~~~------~~v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~  189 (300)
T PRK06128        116 KDE------AFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIIN  189 (300)
T ss_pred             CCH------HHHHHHHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEE
Confidence            997      4555443       36899999999642        13567889999999999999998753 12246665


Q ss_pred             C
Q psy17489        177 L  177 (177)
Q Consensus       177 v  177 (177)
                      +
T Consensus       190 ~  190 (300)
T PRK06128        190 T  190 (300)
T ss_pred             E
Confidence            3

>PLN02240 UDP-glucose 4-epimerase

Probab=99.62  E-value=1.1e-14  Score=116.41  Aligned_cols=123  Identities=19%  Similarity=0.234  Sum_probs=91.7

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCC-hHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSS-PEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      ++++++++||||+||+|+++++.|++.|   .+|++++|...... ...++.+...            ....++.++.+|
T Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g---~~V~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~D   66 (352)
T PLN02240          2 SLMGRTILVTGGAGYIGSHTVLQLLLAG---YKVVVIDNLDNSSEEALRRVKELAG------------DLGDNLVFHKVD   66 (352)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCCcchHHHHHHHHHhhc------------ccCccceEEecC
Confidence            3567899999999999999999999998   58888887542211 1111211110            012467889999


Q ss_pred             CCCCCCCCCHHHHHHHhc--CCcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        112 LESEHLGLSEDSEQLIKS--KVNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~--~~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      +.+.      +.+..+++  ++|+|||+|+....   ...+...+++|+.++.+++++|++. ++++|||+
T Consensus        67 ~~~~------~~l~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~  130 (352)
T PLN02240         67 LRDK------EALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKH-GCKKLVFS  130 (352)
T ss_pred             cCCH------HHHHHHHHhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEE
Confidence            9998      67777775  68999999997532   2345678999999999999999988 88899874

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.62  E-value=5.3e-15  Score=127.49  Aligned_cols=114  Identities=15%  Similarity=0.237  Sum_probs=87.8

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhh-CCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRS-FPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~-g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .++|+|+||||+||||+++++.|++. |   ++|++++|.....      ....              ...++.++.+|+
T Consensus       313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g---~~V~~l~r~~~~~------~~~~--------------~~~~~~~~~gDl  369 (660)
T PRK08125        313 KRRTRVLILGVNGFIGNHLTERLLRDDN---YEVYGLDIGSDAI------SRFL--------------GHPRFHFVEGDI  369 (660)
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHhCCC---cEEEEEeCCchhh------hhhc--------------CCCceEEEeccc
Confidence            46789999999999999999999985 5   5899999865211      1100              114688899999


Q ss_pred             CCCCCCCCHHHHHHHhcCCcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        113 ESEHLGLSEDSEQLIKSKVNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      ++..     ..+..+++++|+|||+||....   ......++++|+.++.+++++|++. + ++|||+
T Consensus       370 ~d~~-----~~l~~~l~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~-~-~~~V~~  430 (660)
T PRK08125        370 SIHS-----EWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKY-N-KRIIFP  430 (660)
T ss_pred             cCcH-----HHHHHHhcCCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhc-C-CeEEEE
Confidence            9862     2356677899999999997543   2334567899999999999999998 6 789874

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.62  E-value=9.4e-15  Score=126.12  Aligned_cols=123  Identities=24%  Similarity=0.419  Sum_probs=90.5

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      ..++|+|+||||+||||+++++.|++.|++ .+|++++|.......    .....           .....++.++.+|+
T Consensus         3 ~~~~~~VLVTGatGfIG~~lv~~Ll~~g~~-~~V~~~d~~~~~~~~----~~l~~-----------~~~~~~v~~~~~Dl   66 (668)
T PLN02260          3 TYEPKNILITGAAGFIASHVANRLIRNYPD-YKIVVLDKLDYCSNL----KNLNP-----------SKSSPNFKFVKGDI   66 (668)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHhCCC-CEEEEEeCCCccchh----hhhhh-----------cccCCCeEEEECCC
Confidence            356789999999999999999999998533 478888875321111    11100           00124688999999


Q ss_pred             CCCCCCCCHHHHHHHh--cCCcEEEEcCcccCchH---HHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        113 ESEHLGLSEDSEQLIK--SKVNIIFHCAASLRFDE---ALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~--~~~d~vi~~aa~~~~~~---~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      .+.      +.+..++  .++|+|||+|+......   +..+++++|+.++.+++++|++.+.++||||+
T Consensus        67 ~d~------~~~~~~~~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~  130 (668)
T PLN02260         67 ASA------DLVNYLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHV  130 (668)
T ss_pred             CCh------HHHHHHHhhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence            997      5566554  57999999999865432   33467899999999999999998448999985

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.61  E-value=1.2e-14  Score=116.50  Aligned_cols=118  Identities=18%  Similarity=0.295  Sum_probs=84.3

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      ++++||||+||||+++++.|++.|+  ..+++.+|....... ..+...             . ...++.++.+|+.+. 
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~--~~v~~~~~~~~~~~~-~~~~~~-------------~-~~~~~~~~~~Dl~d~-   63 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETS--DAVVVVDKLTYAGNL-MSLAPV-------------A-QSERFAFEKVDICDR-   63 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCC--CEEEEEecCccccch-hhhhhc-------------c-cCCceEEEECCCcCh-
Confidence            6899999999999999999999984  224444443221111 111110             0 113578889999998 


Q ss_pred             CCCCHHHHHHHhc--CCcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhc--------CCCCCceeC
Q psy17489        117 LGLSEDSEQLIKS--KVNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKEC--------VNLKRFCEL  177 (177)
Q Consensus       117 ~~~~~~~~~~~~~--~~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~--------~~~~~~v~v  177 (177)
                           +.+..+++  ++|+|||+||.....   ..+..++++|+.++.+++++|.+.        +++++|||+
T Consensus        64 -----~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~  132 (355)
T PRK10217         64 -----AELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHI  132 (355)
T ss_pred             -----HHHHHHHhhcCCCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEe
Confidence                 77888887  489999999976532   345678999999999999999762        256788874

>PLN02686 cinnamoyl-CoA reductase

Probab=99.60  E-value=1.2e-14  Score=117.35  Aligned_cols=126  Identities=18%  Similarity=0.209  Sum_probs=90.8

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      ..++|+|+||||+||||+++++.|++.|   ++|+++.|+...   .+.+..+...       .+......++.++.+|+
T Consensus        50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G---~~V~~~~r~~~~---~~~l~~l~~~-------~~~~~~~~~~~~v~~Dl  116 (367)
T PLN02686         50 DAEARLVCVTGGVSFLGLAIVDRLLRHG---YSVRIAVDTQED---KEKLREMEMF-------GEMGRSNDGIWTVMANL  116 (367)
T ss_pred             CCCCCEEEEECCchHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHHhhh-------ccccccCCceEEEEcCC
Confidence            3468899999999999999999999999   588877775421   1122111000       00000013578899999


Q ss_pred             CCCCCCCCHHHHHHHhcCCcEEEEcCcccCchH---HHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        113 ESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDE---ALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~---~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      ++.      +.+..+++++|.|||+|+......   ....+.++|+.++.+++++|++.++++||||+
T Consensus       117 ~d~------~~l~~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~  178 (367)
T PLN02686        117 TEP------ESLHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFT  178 (367)
T ss_pred             CCH------HHHHHHHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEe
Confidence            998      778888999999999999754321   22346788999999999999986479999985

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.59  E-value=1.4e-14  Score=119.35  Aligned_cols=111  Identities=27%  Similarity=0.395  Sum_probs=82.5

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      ++|+|+||||+||||++|++.|++.|   .+|++++|.....  .+.+...+              ...+++++.+|+.+
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G---~~V~~ld~~~~~~--~~~~~~~~--------------~~~~~~~i~~D~~~  178 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARG---DSVIVVDNFFTGR--KENVMHHF--------------SNPNFELIRHDVVE  178 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCc---CEEEEEeCCCccc--hhhhhhhc--------------cCCceEEEECCccC
Confidence            56899999999999999999999999   5888887753211  11111111              12467888889876


Q ss_pred             CCCCCCHHHHHHHhcCCcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        115 EHLGLSEDSEQLIKSKVNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      .           ++.++|+|||+|+....   ..+....+++|+.++.+++++|++. ++ +|||+
T Consensus       179 ~-----------~l~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~-g~-r~V~~  231 (442)
T PLN02206        179 P-----------ILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-GA-RFLLT  231 (442)
T ss_pred             h-----------hhcCCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHh-CC-EEEEE
Confidence            5           13578999999997542   2345668899999999999999998 65 78874

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.59  E-value=1.1e-14  Score=118.30  Aligned_cols=120  Identities=23%  Similarity=0.350  Sum_probs=89.7

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      ...+++++||||+|+||+++++.|++.|   .+|++++|+...............             ..+++.++.+|+
T Consensus        57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G---~~V~~l~R~~~~~~~~~~~~~~~~-------------~~~~v~~v~~Dl  120 (390)
T PLN02657         57 EPKDVTVLVVGATGYIGKFVVRELVRRG---YNVVAVAREKSGIRGKNGKEDTKK-------------ELPGAEVVFGDV  120 (390)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEEechhhccccchhhHHhh-------------hcCCceEEEeeC
Confidence            4567899999999999999999999998   589999997532110000000000             124688999999


Q ss_pred             CCCCCCCCHHHHHHHhc----CCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        113 ESEHLGLSEDSEQLIKS----KVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~----~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      +|.      +.+..+++    ++|+||||++....  .....+++|+.++.+++++|++. ++++||++
T Consensus       121 ~d~------~~l~~~~~~~~~~~D~Vi~~aa~~~~--~~~~~~~vn~~~~~~ll~aa~~~-gv~r~V~i  180 (390)
T PLN02657        121 TDA------DSLRKVLFSEGDPVDVVVSCLASRTG--GVKDSWKIDYQATKNSLDAGREV-GAKHFVLL  180 (390)
T ss_pred             CCH------HHHHHHHHHhCCCCcEEEECCccCCC--CCccchhhHHHHHHHHHHHHHHc-CCCEEEEE
Confidence            998      78888877    59999999885321  12235688999999999999998 89999985

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.59  E-value=1.4e-14  Score=113.67  Aligned_cols=107  Identities=27%  Similarity=0.430  Sum_probs=87.1

Q ss_pred             eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCC
Q psy17489         38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHL  117 (177)
Q Consensus        38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~  117 (177)
                      .|+||||+||||++++..|++.|   +.|+.++|.......                      ....+.++.+|+.+.  
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g---~~V~~~~r~~~~~~~----------------------~~~~~~~~~~d~~~~--   54 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAG---HDVRGLDRLRDGLDP----------------------LLSGVEFVVLDLTDR--   54 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCC---CeEEEEeCCCccccc----------------------cccccceeeecccch--
Confidence            49999999999999999999998   699999987643210                      003578889999887  


Q ss_pred             CCCHHHHHHHhcCC-cEEEEcCcccCchHH----HHHHHHHhHHHHHHHHHHHHhcCCCCCcee
Q psy17489        118 GLSEDSEQLIKSKV-NIIFHCAASLRFDEA----LQKAIRANLYATKQMLNLAKECVNLKRFCE  176 (177)
Q Consensus       118 ~~~~~~~~~~~~~~-d~vi~~aa~~~~~~~----~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~  176 (177)
                          +....+.+.+ |.|||+|+.......    +..++++|+.++.+++++|++. ++++|||
T Consensus        55 ----~~~~~~~~~~~d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~-~~~~~v~  113 (314)
T COG0451          55 ----DLVDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAA-GVKRFVF  113 (314)
T ss_pred             ----HHHHHHHhcCCCEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEE
Confidence                5677777777 999999998764433    3358899999999999999996 9999997

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.59  E-value=4.1e-14  Score=112.52  Aligned_cols=117  Identities=15%  Similarity=0.187  Sum_probs=86.6

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+++||||+||||+++++.|++.|   .+|++++|......  ..+.....          .  ...++.++.+|+.+. 
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~~~~~~~~--~~~~~~~~----------~--~~~~~~~~~~Dl~d~-   62 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNG---HDVVILDNLCNSKR--SVLPVIER----------L--GGKHPTFVEGDIRNE-   62 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCC---CeEEEEecCCCchH--hHHHHHHH----------h--cCCCceEEEccCCCH-
Confidence            579999999999999999999998   57888776432211  11111100          0  013567889999987 


Q ss_pred             CCCCHHHHHHHhc--CCcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        117 LGLSEDSEQLIKS--KVNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       117 ~~~~~~~~~~~~~--~~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                           +.+..+++  ++|+|||+|+....   .....+.+++|+.++.+++++|++. ++++||++
T Consensus        63 -----~~~~~~~~~~~~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~  122 (338)
T PRK10675         63 -----ALLTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNLIFS  122 (338)
T ss_pred             -----HHHHHHHhcCCCCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEe
Confidence                 67777775  68999999987542   2234567899999999999999998 88899974

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.58  E-value=1.3e-14  Score=113.99  Aligned_cols=97  Identities=16%  Similarity=0.105  Sum_probs=77.8

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+||||||+||||+++++.|++.|    +|++++|...                                .+.+|+.|. 
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g----~V~~~~~~~~--------------------------------~~~~Dl~d~-   43 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG----NLIALDVHST--------------------------------DYCGDFSNP-   43 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC----CEEEeccccc--------------------------------cccCCCCCH-
Confidence            579999999999999999999887    4777776421                                245799987 


Q ss_pred             CCCCHHHHHHHhc--CCcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        117 LGLSEDSEQLIKS--KVNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       117 ~~~~~~~~~~~~~--~~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                           +.+.++++  ++|+|||+||.....   ...+..+++|+.++.+++++|++. ++ +|||+
T Consensus        44 -----~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~-g~-~~v~~  102 (299)
T PRK09987         44 -----EGVAETVRKIRPDVIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEV-GA-WVVHY  102 (299)
T ss_pred             -----HHHHHHHHhcCCCEEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEE
Confidence                 77888877  589999999987543   234556799999999999999998 65 68874

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.57  E-value=3e-14  Score=112.47  Aligned_cols=110  Identities=24%  Similarity=0.368  Sum_probs=89.6

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+++||||+||||+++++.|++.|   ++|++++|++....   .+                  ....+.++.+|+.+. 
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g---~~V~~~~r~~~~~~---~~------------------~~~~~~~~~~D~~~~-   55 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQG---EEVRVLVRPTSDRR---NL------------------EGLDVEIVEGDLRDP-   55 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCC---CEEEEEEecCcccc---cc------------------ccCCceEEEeeCCCH-
Confidence            479999999999999999999998   58999998753210   00                  013578899999998 


Q ss_pred             CCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        117 LGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       117 ~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                           +.+..+++++|+|||+|+.... ..+++..+++|+.++.++++++.+. ++++|||+
T Consensus        56 -----~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~  111 (328)
T TIGR03466        56 -----ASLRKAVAGCRALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEA-GVERVVYT  111 (328)
T ss_pred             -----HHHHHHHhCCCEEEEeceecccCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEE
Confidence                 7888889999999999986432 3446678899999999999999998 88899874

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.57  E-value=5.1e-14  Score=107.92  Aligned_cols=119  Identities=18%  Similarity=0.142  Sum_probs=84.7

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++++++||||+|+||.++++.|++.|   ++|++++|++..  . +++.+.+..            ...++.++++|++
T Consensus         5 ~~~~~vlItGasg~iG~~la~~l~~~G---~~v~~~~r~~~~--~-~~~~~~~~~------------~~~~~~~~~~Dl~   66 (262)
T PRK13394          5 LNGKTAVVTGAASGIGKEIALELARAG---AAVAIADLNQDG--A-NAVADEINK------------AGGKAIGVAMDVT   66 (262)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCC---CeEEEEeCChHH--H-HHHHHHHHh------------cCceEEEEECCCC
Confidence            468999999999999999999999999   578888886521  1 122211110            1245788999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHH----HHHHHHH-HhcCCCCCc
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYAT----KQMLNLA-KECVNLKRF  174 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~----~~ll~~~-~~~~~~~~~  174 (177)
                      +.      +.+..+++       ++|+|||+||....       .+.++..+++|+.++    ..+++.+ +.. +.++|
T Consensus        67 ~~------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~~~~i  139 (262)
T PRK13394         67 NE------DAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDD-RGGVV  139 (262)
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhc-CCcEE
Confidence            98      55555443       48999999997532       355677889999994    4455555 444 67788


Q ss_pred             eeC
Q psy17489        175 CEL  177 (177)
Q Consensus       175 v~v  177 (177)
                      |++
T Consensus       140 v~~  142 (262)
T PRK13394        140 IYM  142 (262)
T ss_pred             EEE
Confidence            874

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.57  E-value=3e-14  Score=117.26  Aligned_cols=111  Identities=27%  Similarity=0.389  Sum_probs=82.2

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      ..|+|+||||+||||++|++.|++.|   .+|++++|.....  ...+....              ...+++++.+|+.+
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G---~~V~~ldr~~~~~--~~~~~~~~--------------~~~~~~~~~~Di~~  179 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRG---DEVIVIDNFFTGR--KENLVHLF--------------GNPRFELIRHDVVE  179 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCC---CEEEEEeCCCCcc--HhHhhhhc--------------cCCceEEEECcccc
Confidence            45799999999999999999999999   5889888753221  11111111              01357788888876


Q ss_pred             CCCCCCHHHHHHHhcCCcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        115 EHLGLSEDSEQLIKSKVNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      ..           +.++|+|||+|+....   ..+...++++|+.++.+++++|++. ++ +|||+
T Consensus       180 ~~-----------~~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~-g~-r~V~~  232 (436)
T PLN02166        180 PI-----------LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV-GA-RFLLT  232 (436)
T ss_pred             cc-----------ccCCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHh-CC-EEEEE
Confidence            51           3578999999997542   2345678899999999999999998 65 78874

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.57  E-value=7.7e-14  Score=108.05  Aligned_cols=114  Identities=15%  Similarity=0.308  Sum_probs=85.4

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      .|+++||||+|+||+++++.|++.|   ++|++++|+.      +.+......            ...++.++.+|+++.
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g---~~v~~~~r~~------~~~~~~~~~------------~~~~~~~~~~D~~~~   60 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARG---DRVAATVRRP------DALDDLKAR------------YGDRLWVLQLDVTDS   60 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCC---CEEEEEeCCH------HHHHHHHHh------------ccCceEEEEccCCCH
Confidence            3689999999999999999999998   5888888864      222222110            124688899999998


Q ss_pred             CCCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHH----HhcCCCCCceeC
Q psy17489        116 HLGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLA----KECVNLKRFCEL  177 (177)
Q Consensus       116 ~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~v  177 (177)
                            +++..++       .++|+|||+||....       .+.++..+++|+.++.++++.+    ++. +.++||++
T Consensus        61 ------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~~  133 (276)
T PRK06482         61 ------AAVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQ-GGGRIVQV  133 (276)
T ss_pred             ------HHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEE
Confidence                  5555544       358999999997532       3456778899999999999987    444 66788874

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.56  E-value=3.8e-14  Score=113.44  Aligned_cols=118  Identities=19%  Similarity=0.259  Sum_probs=84.4

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+|+||||+||||+++++.|++.|+  ..|+.+++....... ..+....              ...++.++.+|+++. 
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~--~~v~~~~~~~~~~~~-~~~~~~~--------------~~~~~~~~~~Dl~d~-   62 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQ--DSVVNVDKLTYAGNL-ESLADVS--------------DSERYVFEHADICDR-   62 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCC--CeEEEecCCCccchH-HHHHhcc--------------cCCceEEEEecCCCH-
Confidence            4799999999999999999999984  245555543211111 1111100              113578899999998 


Q ss_pred             CCCCHHHHHHHhc--CCcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhc--------CCCCCceeC
Q psy17489        117 LGLSEDSEQLIKS--KVNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKEC--------VNLKRFCEL  177 (177)
Q Consensus       117 ~~~~~~~~~~~~~--~~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~--------~~~~~~v~v  177 (177)
                           +++..+++  ++|+|||+||....   ...++.++++|+.++.+++++|+++        +++++|||+
T Consensus        63 -----~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~  131 (352)
T PRK10084         63 -----AELDRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHI  131 (352)
T ss_pred             -----HHHHHHHHhcCCCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEe
Confidence                 78888876  48999999997543   2335678999999999999999864        246688874

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.56  E-value=1.1e-13  Score=107.46  Aligned_cols=116  Identities=10%  Similarity=0.095  Sum_probs=85.6

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      .+++++||||+|+||+++++.|++.|   .+|++++|+..      .+..+...            ...++.++.+|+++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G---~~V~~~~r~~~------~~~~l~~~------------~~~~~~~~~~D~~d   61 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAG---HRVVGTVRSEA------ARADFEAL------------HPDRALARLLDVTD   61 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCc---CEEEEEeCCHH------HHHHHHhh------------cCCCeeEEEccCCC
Confidence            46899999999999999999999999   68999998652      22221110            12467888999999


Q ss_pred             CCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHh---cCCCCCceeC
Q psy17489        115 EHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKE---CVNLKRFCEL  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~---~~~~~~~v~v  177 (177)
                      .      +++..+++       ++|+|||+||....       .+.+...+++|+.++.++++.+..   ..+.++||++
T Consensus        62 ~------~~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~i  135 (277)
T PRK06180         62 F------DAIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNI  135 (277)
T ss_pred             H------HHHHHHHHHHHHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEE
Confidence            8      55555544       58999999997532       355677899999999999998543   1145577764

>PRK06398 aldose dehydrogenase; Validated

Probab=99.56  E-value=1e-13  Score=106.59  Aligned_cols=109  Identities=12%  Similarity=0.170  Sum_probs=85.2

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|+....                          .++.++++|++
T Consensus         4 l~gk~vlItGas~gIG~~ia~~l~~~G---~~Vi~~~r~~~~~--------------------------~~~~~~~~D~~   54 (258)
T PRK06398          4 LKDKVAIVTGGSQGIGKAVVNRLKEEG---SNVINFDIKEPSY--------------------------NDVDYFKVDVS   54 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCC---CeEEEEeCCcccc--------------------------CceEEEEccCC
Confidence            568999999999999999999999999   5899988865321                          35778999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCcee
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFCE  176 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~  176 (177)
                      ++      +++..+++       ++|++|||||...       ..++|+..+++|+.++..+++.+.+.   .+..++|+
T Consensus        55 ~~------~~i~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~  128 (258)
T PRK06398         55 NK------EQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIIN  128 (258)
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEE
Confidence            98      55555443       6899999999743       24567888999999999998877542   14457776


Q ss_pred             C
Q psy17489        177 L  177 (177)
Q Consensus       177 v  177 (177)
                      +
T Consensus       129 i  129 (258)
T PRK06398        129 I  129 (258)
T ss_pred             e
Confidence            4

>PRK06182 short chain dehydrogenase; Validated

Probab=99.55  E-value=1.2e-13  Score=106.82  Aligned_cols=112  Identities=13%  Similarity=0.250  Sum_probs=83.7

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      ++++++||||+|+||.++++.|++.|   ++|++++|+.      +.+.....               .++.++.+|+++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G---~~V~~~~r~~------~~l~~~~~---------------~~~~~~~~Dv~~   57 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQG---YTVYGAARRV------DKMEDLAS---------------LGVHPLSLDVTD   57 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCH------HHHHHHHh---------------CCCeEEEeeCCC
Confidence            47899999999999999999999999   5899988865      22222211               247789999999


Q ss_pred             CCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHH----HHHhcCCCCCcee
Q psy17489        115 EHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLN----LAKECVNLKRFCE  176 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~----~~~~~~~~~~~v~  176 (177)
                      .      +.+..+++       ++|++||+||....       .+.++..+++|+.++..+++    .+++. +..++|+
T Consensus        58 ~------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-~~g~iv~  130 (273)
T PRK06182         58 E------ASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQ-RSGRIIN  130 (273)
T ss_pred             H------HHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhc-CCCEEEE
Confidence            8      56666554       78999999997542       35677789999998666555    44555 5667776


Q ss_pred             C
Q psy17489        177 L  177 (177)
Q Consensus       177 v  177 (177)
                      +
T Consensus       131 i  131 (273)
T PRK06182        131 I  131 (273)
T ss_pred             E
Confidence            4

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.55  E-value=2.3e-14  Score=108.04  Aligned_cols=109  Identities=28%  Similarity=0.455  Sum_probs=87.2

Q ss_pred             EEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCCC
Q psy17489         39 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLG  118 (177)
Q Consensus        39 vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~  118 (177)
                      |+||||+||||++++++|++.|   ..|+.+.|++.....    ..                ...++.++.+|+.+.   
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g---~~v~~~~~~~~~~~~----~~----------------~~~~~~~~~~dl~~~---   54 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKG---HEVIVLSRSSNSESF----EE----------------KKLNVEFVIGDLTDK---   54 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTT---TEEEEEESCSTGGHH----HH----------------HHTTEEEEESETTSH---
T ss_pred             EEEEccCCHHHHHHHHHHHHcC---Ccccccccccccccc----cc----------------ccceEEEEEeecccc---
Confidence            7999999999999999999999   578888887643211    00                012789999999987   


Q ss_pred             CCHHHHHHHhcC--CcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        119 LSEDSEQLIKSK--VNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       119 ~~~~~~~~~~~~--~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                         +.+.++++.  +|.|||+|+....   .......++.|+.++.+++++|++. ++++|||+
T Consensus        55 ---~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~i~~  114 (236)
T PF01370_consen   55 ---EQLEKLLEKANIDVVIHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREA-GVKRFIFL  114 (236)
T ss_dssp             ---HHHHHHHHHHTESEEEEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TTSEEEEE
T ss_pred             ---ccccccccccCceEEEEeeccccccccccccccccccccccccccccccccc-cccccccc
Confidence               788888875  5999999998542   2344567899999999999999998 88999874

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK05717 oxidoreductase; Validated

Probab=99.55  E-value=1.9e-13  Score=104.71  Aligned_cols=110  Identities=12%  Similarity=0.050  Sum_probs=81.9

Q ss_pred             cccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489         31 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS  110 (177)
Q Consensus        31 ~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  110 (177)
                      ...++||+++||||+|+||+++++.|++.|   .+|++++|+...      .......            ...++.++.+
T Consensus         5 ~~~~~~k~vlItG~sg~IG~~~a~~l~~~g---~~v~~~~~~~~~------~~~~~~~------------~~~~~~~~~~   63 (255)
T PRK05717          5 NPGHNGRVALVTGAARGIGLGIAAWLIAEG---WQVVLADLDRER------GSKVAKA------------LGENAWFIAM   63 (255)
T ss_pred             CcccCCCEEEEeCCcchHHHHHHHHHHHcC---CEEEEEcCCHHH------HHHHHHH------------cCCceEEEEc
Confidence            345678999999999999999999999998   588888875421      1111110            1246788999


Q ss_pred             CCCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC---------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        111 NLESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR---------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       111 D~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~---------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      |+++.      +++..++       .++|++||+||...         ..++++..+++|+.++.++++++.+
T Consensus        64 Dl~~~------~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  130 (255)
T PRK05717         64 DVADE------AQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAP  130 (255)
T ss_pred             cCCCH------HHHHHHHHHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            99997      4544432       35899999999753         1345778899999999999999864

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.55  E-value=1.5e-13  Score=105.21  Aligned_cols=112  Identities=16%  Similarity=0.296  Sum_probs=84.3

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+.+++++||||+++||..+++.|.++|   ++++.++|+.      +++.++.++     +.   ......+.++++|+
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g---~~liLvaR~~------~kL~~la~~-----l~---~~~~v~v~vi~~DL   65 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRG---YNLILVARRE------DKLEALAKE-----LE---DKTGVEVEVIPADL   65 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCcH------HHHHHHHHH-----HH---HhhCceEEEEECcC
Confidence            4578899999999999999999999999   6999999986      333333221     00   00124678999999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      +++      +++..+..       .+|++|||||...+       .+..++++++|+.+...|.++...
T Consensus        66 s~~------~~~~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp  128 (265)
T COG0300          66 SDP------EALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLP  128 (265)
T ss_pred             CCh------hHHHHHHHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence            998      55655543       58999999998643       345567899999999988877643

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.55  E-value=1.7e-13  Score=104.27  Aligned_cols=120  Identities=14%  Similarity=0.131  Sum_probs=88.1

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      ++++|+++||||+|++|.++++.|+++|   ++|++++|+...  ........ .            ....++.++.+|+
T Consensus         3 ~~~~~~ilItGasg~iG~~l~~~l~~~g---~~V~~~~r~~~~--~~~~~~~l-~------------~~~~~~~~~~~Dl   64 (251)
T PRK12826          3 DLEGRVALVTGAARGIGRAIAVRLAADG---AEVIVVDICGDD--AAATAELV-E------------AAGGKARARQVDV   64 (251)
T ss_pred             CCCCCEEEEcCCCCcHHHHHHHHHHHCC---CEEEEEeCCHHH--HHHHHHHH-H------------hcCCeEEEEECCC
Confidence            3567899999999999999999999999   589999987521  11111111 1            0124588899999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCc
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAK----ECVNLKRF  174 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~  174 (177)
                      .+.      +++..+++       .+|+|||+++....       .+++...+++|+.++.++++.+.    +. +.++|
T Consensus        65 ~~~------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~i  137 (251)
T PRK12826         65 RDR------AALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRA-GGGRI  137 (251)
T ss_pred             CCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEE
Confidence            997      56666554       68999999987542       34667789999999999998874    33 56677


Q ss_pred             eeC
Q psy17489        175 CEL  177 (177)
Q Consensus       175 v~v  177 (177)
                      |++
T Consensus       138 i~~  140 (251)
T PRK12826        138 VLT  140 (251)
T ss_pred             EEE
Confidence            764

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.55  E-value=1.6e-13  Score=105.10  Aligned_cols=120  Identities=13%  Similarity=0.152  Sum_probs=87.9

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.+++++|++.|   ++|++++|++..  . +.+.+.+..            ...++.++.+|+.
T Consensus         8 ~~~k~vlItGa~g~iG~~ia~~l~~~G---~~V~~~~r~~~~--~-~~~~~~i~~------------~~~~~~~~~~D~~   69 (255)
T PRK07523          8 LTGRRALVTGSSQGIGYALAEGLAQAG---AEVILNGRDPAK--L-AAAAESLKG------------QGLSAHALAFDVT   69 (255)
T ss_pred             CCCCEEEEECCcchHHHHHHHHHHHcC---CEEEEEeCCHHH--H-HHHHHHHHh------------cCceEEEEEccCC
Confidence            578999999999999999999999999   588888886421  1 111111110            1245788999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCcee
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFCE  176 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~  176 (177)
                      +.      +++..+++       ++|++||+||...       ..+.+++.+++|+.++.++++.+.+.   .+.++||+
T Consensus        70 ~~------~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~  143 (255)
T PRK07523         70 DH------DAVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIIN  143 (255)
T ss_pred             CH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEE
Confidence            98      56666554       5899999999753       23566778999999999999988643   14567776


Q ss_pred             C
Q psy17489        177 L  177 (177)
Q Consensus       177 v  177 (177)
                      +
T Consensus       144 i  144 (255)
T PRK07523        144 I  144 (255)
T ss_pred             E
Confidence            4

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.54  E-value=1.3e-13  Score=105.35  Aligned_cols=119  Identities=17%  Similarity=0.123  Sum_probs=85.7

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++++++||||+|+||++++++|++.|   .+|++++|++...   +.+.....            ....++.++.+|+.
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g---~~v~~~~r~~~~~---~~~~~~~~------------~~~~~~~~~~~Dl~   63 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEG---AKVVIADLNDEAA---AAAAEALQ------------KAGGKAIGVAMDVT   63 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCC---CeEEEEeCCHHHH---HHHHHHHH------------hcCCcEEEEEcCCC
Confidence            467899999999999999999999999   5899999875321   11111111            01256888999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHH----HhcCCCCCce
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLA----KECVNLKRFC  175 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v  175 (177)
                      +.      +++..+++       ++|+|||+|+....       ...++..+++|+.++..+++.+    ++. +.++||
T Consensus        64 ~~------~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv  136 (258)
T PRK12429         64 DE------EAINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQ-GGGRII  136 (258)
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc-CCeEEE
Confidence            98      56655544       68999999996432       3456678899999977666655    444 677888


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      |+
T Consensus       137 ~i  138 (258)
T PRK12429        137 NM  138 (258)
T ss_pred             EE
Confidence            74

>PRK06194 hypothetical protein; Provisional

Probab=99.54  E-value=1.9e-13  Score=106.31  Aligned_cols=108  Identities=9%  Similarity=0.069  Sum_probs=80.3

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++++++||||+|+||+++++.|++.|   ++|++++|+...  . ++..+...            ....++.++.+|++
T Consensus         4 ~~~k~vlVtGasggIG~~la~~l~~~G---~~V~~~~r~~~~--~-~~~~~~~~------------~~~~~~~~~~~D~~   65 (287)
T PRK06194          4 FAGKVAVITGAASGFGLAFARIGAALG---MKLVLADVQQDA--L-DRAVAELR------------AQGAEVLGVRTDVS   65 (287)
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCC---CEEEEEeCChHH--H-HHHHHHHH------------hcCCeEEEEECCCC
Confidence            457899999999999999999999999   588888886421  1 11111111            01246788999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHH
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLA  165 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~  165 (177)
                      +.      +++..+++       ++|+|||+||....       .+.++..+++|+.++.++++.+
T Consensus        66 d~------~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~  125 (287)
T PRK06194         66 DA------AQVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAF  125 (287)
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHH
Confidence            98      56666554       58999999998542       3567778999999999987774

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.54  E-value=1e-13  Score=106.99  Aligned_cols=110  Identities=15%  Similarity=0.187  Sum_probs=86.0

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      ++++++||||+|+||.++++.|++.|   ++|++++|+.....                       ...++.++++|++|
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g---~~V~~~~r~~~~~~-----------------------~~~~~~~~~~D~~d   56 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAG---YRVFGTSRNPARAA-----------------------PIPGVELLELDVTD   56 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCC---CEEEEEeCChhhcc-----------------------ccCCCeeEEeecCC
Confidence            46799999999999999999999999   58999998753210                       11467889999999


Q ss_pred             CCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHH----HhcCCCCCcee
Q psy17489        115 EHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLA----KECVNLKRFCE  176 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~  176 (177)
                      .      +++..+++       ++|++|||||...       ..+.++..+++|+.++.++++.+    ++. +.++||+
T Consensus        57 ~------~~~~~~~~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~~iv~  129 (270)
T PRK06179         57 D------ASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQ-GSGRIIN  129 (270)
T ss_pred             H------HHHHHHHHHHHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEE
Confidence            8      66666654       5799999999753       23567788999999999998875    444 6678876


Q ss_pred             C
Q psy17489        177 L  177 (177)
Q Consensus       177 v  177 (177)
                      +
T Consensus       130 i  130 (270)
T PRK06179        130 I  130 (270)
T ss_pred             E
Confidence            4

>PRK07985 oxidoreductase; Provisional

Probab=99.54  E-value=6.2e-13  Score=104.24  Aligned_cols=123  Identities=19%  Similarity=0.192  Sum_probs=86.4

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   ++|++.+|+...... +.+.+....            ...++.++.+|+
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G---~~Vi~~~~~~~~~~~-~~~~~~~~~------------~~~~~~~~~~Dl  109 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREG---ADVAISYLPVEEEDA-QDVKKIIEE------------CGRKAVLLPGDL  109 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCC---CEEEEecCCcchhhH-HHHHHHHHH------------cCCeEEEEEccC
Confidence            3678999999999999999999999999   578877665432221 222222211            124577899999


Q ss_pred             CCCCCCCCHHHHHHH-------hcCCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHhc-CCCCCcee
Q psy17489        113 ESEHLGLSEDSEQLI-------KSKVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKEC-VNLKRFCE  176 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~-------~~~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~  176 (177)
                      ++.      +++..+       +.++|++||+||...        ..++|+..+++|+.++.++++.+... ..-.+||+
T Consensus       110 ~~~------~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~  183 (294)
T PRK07985        110 SDE------KFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIIT  183 (294)
T ss_pred             CCH------HHHHHHHHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEE
Confidence            997      455444       346899999998632        13567888999999999999988653 11246665


Q ss_pred             C
Q psy17489        177 L  177 (177)
Q Consensus       177 v  177 (177)
                      +
T Consensus       184 i  184 (294)
T PRK07985        184 T  184 (294)
T ss_pred             E
Confidence            3

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.54  E-value=1.4e-13  Score=127.05  Aligned_cols=137  Identities=26%  Similarity=0.394  Sum_probs=105.1

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhC-CCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSF-PDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g-~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      ..++|+||||+||+|++++..|++.+ ....+|+++.|........+++.+...+...  ..   .....++.++.+|+.
T Consensus       970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~--~~---~~~~~~i~~~~gDl~ 1044 (1389)
T TIGR03443       970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGI--WD---EEWASRIEVVLGDLS 1044 (1389)
T ss_pred             CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCC--Cc---hhhhcceEEEeccCC
Confidence            35789999999999999999999876 1236899999976544333444433222111  00   111247899999999


Q ss_pred             CCCCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        114 SEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      ++.+++..+.+..+..++|+|||+|+..+...++..+...|+.++.+++++|.+. ++++|+|+
T Consensus      1045 ~~~lgl~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~-~~~~~v~v 1107 (1389)
T TIGR03443      1045 KEKFGLSDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEG-KAKQFSFV 1107 (1389)
T ss_pred             CccCCcCHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhC-CCceEEEE
Confidence            9988888888888888999999999998766666667788999999999999987 88899885

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.53  E-value=2.8e-13  Score=101.49  Aligned_cols=108  Identities=11%  Similarity=0.152  Sum_probs=84.9

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      .++|.++||||+++||.++++.|.+.|   ++|+..+|+.      ++++.+..+         ..+  ..+..+..|++
T Consensus         4 ~~~kv~lITGASSGiG~A~A~~l~~~G---~~vvl~aRR~------drL~~la~~---------~~~--~~~~~~~~DVt   63 (246)
T COG4221           4 LKGKVALITGASSGIGEATARALAEAG---AKVVLAARRE------ERLEALADE---------IGA--GAALALALDVT   63 (246)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCC---CeEEEEeccH------HHHHHHHHh---------hcc--CceEEEeeccC
Confidence            467899999999999999999999999   6999999986      444444332         111  46788999999


Q ss_pred             CCCCCCCHHHHHHH-------hcCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        114 SEHLGLSEDSEQLI-------KSKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       114 ~~~~~~~~~~~~~~-------~~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      |.      +++..+       +.++|++|||||...       ..++|+.++++|+.|..+..++...
T Consensus        64 D~------~~~~~~i~~~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP  125 (246)
T COG4221          64 DR------AAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLP  125 (246)
T ss_pred             CH------HHHHHHHHHHHHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            98      453333       447999999999743       2578999999999999999887643

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.53  E-value=2.6e-13  Score=105.33  Aligned_cols=112  Identities=15%  Similarity=0.235  Sum_probs=81.8

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      .+++++||||+|+||.++++.|.+.|   .+|++++|+..      .+..+..               ..+.++.+|+++
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G---~~Vi~~~r~~~------~~~~l~~---------------~~~~~~~~Dl~d   58 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDG---WRVFATCRKEE------DVAALEA---------------EGLEAFQLDYAE   58 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHH------HHHHHHH---------------CCceEEEccCCC
Confidence            46799999999999999999999998   58999998752      2222211               246788999999


Q ss_pred             CCCCCCHHHHHHHhc--------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHH----HHHHHHhcCCCCCce
Q psy17489        115 EHLGLSEDSEQLIKS--------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQ----MLNLAKECVNLKRFC  175 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~--------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~----ll~~~~~~~~~~~~v  175 (177)
                      .      +++..+++        ++|++|||||....       .+.++..+++|+.++..    +++.+++. +..+||
T Consensus        59 ~------~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~-~~g~iv  131 (277)
T PRK05993         59 P------ESIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQ-GQGRIV  131 (277)
T ss_pred             H------HHHHHHHHHHHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhc-CCCEEE
Confidence            7      45544432        57999999987532       34567789999999554    45555565 667888


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       132 ~i  133 (277)
T PRK05993        132 QC  133 (277)
T ss_pred             EE
Confidence            74

>KOG1430|consensus

Probab=99.53  E-value=4.2e-14  Score=112.39  Aligned_cols=120  Identities=26%  Similarity=0.353  Sum_probs=92.5

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      .++.+++||||+||+|.|++++|++++. ...|++++.........++...               ....++.++.+|+.
T Consensus         2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~-~~~irv~D~~~~~~~~~~e~~~---------------~~~~~v~~~~~D~~   65 (361)
T KOG1430|consen    2 EKKLSVLVTGGSGFLGQHLVQALLENEL-KLEIRVVDKTPTQSNLPAELTG---------------FRSGRVTVILGDLL   65 (361)
T ss_pred             CcCCEEEEECCccHHHHHHHHHHHhccc-ccEEEEeccCccccccchhhhc---------------ccCCceeEEecchh
Confidence            3567999999999999999999999974 4688888887642211111110               01367899999999


Q ss_pred             CCCCCCCHHHHHHHhcCCcEEEEcCcccC--c-hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        114 SEHLGLSEDSEQLIKSKVNIIFHCAASLR--F-DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~d~vi~~aa~~~--~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      +.      ..+..++.++ .|+|+|+...  . ..+.+..+++|+.||.+++++|.+. +++++||.
T Consensus        66 ~~------~~i~~a~~~~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~-~v~~lIYt  124 (361)
T KOG1430|consen   66 DA------NSISNAFQGA-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKEL-GVKRLIYT  124 (361)
T ss_pred             hh------hhhhhhccCc-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHh-CCCEEEEe
Confidence            98      6888999999 7788777532  1 2346668899999999999999999 99999984

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.52  E-value=3e-13  Score=107.22  Aligned_cols=120  Identities=17%  Similarity=0.148  Sum_probs=86.0

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      ..+++++||||+|+||.++++.|++.|   .+|++++|+..      +.......     +    .....++.++.+|++
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~L~~~G---~~V~~~~r~~~------~~~~~~~~-----l----~~~~~~~~~~~~Dl~   65 (322)
T PRK07453          4 DAKGTVIITGASSGVGLYAAKALAKRG---WHVIMACRNLK------KAEAAAQE-----L----GIPPDSYTIIHIDLG   65 (322)
T ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCC---CEEEEEECCHH------HHHHHHHH-----h----hccCCceEEEEecCC
Confidence            357899999999999999999999998   68999888642      11111110     0    001246888999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHh----cC-CCCC
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKE----CV-NLKR  173 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~~  173 (177)
                      +.      +++..+++       ++|++|||||...        ..+.++..+++|+.++.++++.+..    .+ +..|
T Consensus        66 ~~------~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~r  139 (322)
T PRK07453         66 DL------DSVRRFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPR  139 (322)
T ss_pred             CH------HHHHHHHHHHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCce
Confidence            98      56655543       4899999999642        1246778899999999999888764    21 1347


Q ss_pred             ceeC
Q psy17489        174 FCEL  177 (177)
Q Consensus       174 ~v~v  177 (177)
                      +|++
T Consensus       140 iV~v  143 (322)
T PRK07453        140 LVIL  143 (322)
T ss_pred             EEEE
Confidence            8764

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.52  E-value=3.1e-13  Score=102.95  Aligned_cols=120  Identities=16%  Similarity=0.179  Sum_probs=86.0

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   .+|++++|+....   +.+.+...+            ...++.++.+|++
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g---~~vi~~~r~~~~~---~~~~~~~~~------------~~~~~~~~~~Dl~   65 (250)
T PRK07774          4 FDDKVAIVTGAAGGIGQAYAEALAREG---ASVVVADINAEGA---ERVAKQIVA------------DGGTAIAVQVDVS   65 (250)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHHHh------------cCCcEEEEEcCCC
Confidence            467899999999999999999999999   5899998864211   222221110            1235778899999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC----------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCC
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR----------FDEALQKAIRANLYATKQMLNLAKEC---VNLKR  173 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~----------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~  173 (177)
                      +.      +++..+++       .+|+|||+||...          ..+.+++.+++|+.++.++++++.+.   .+.++
T Consensus        66 ~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~  139 (250)
T PRK07774         66 DP------DSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGA  139 (250)
T ss_pred             CH------HHHHHHHHHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcE
Confidence            98      55554433       6899999999742          12456678999999999999987653   13457


Q ss_pred             ceeC
Q psy17489        174 FCEL  177 (177)
Q Consensus       174 ~v~v  177 (177)
                      ||++
T Consensus       140 iv~~  143 (250)
T PRK07774        140 IVNQ  143 (250)
T ss_pred             EEEE
Confidence            7753

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.52  E-value=3.3e-13  Score=103.91  Aligned_cols=120  Identities=13%  Similarity=0.160  Sum_probs=87.0

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++++++||||+|+||.++++.|++.|   ++|++++|+...  . +.+.....            ....++.++.+|++
T Consensus         8 ~~~~~vlItGasggIG~~~a~~l~~~G---~~Vi~~~r~~~~--~-~~~~~~l~------------~~~~~~~~~~~D~~   69 (263)
T PRK07814          8 LDDQVAVVTGAGRGLGAAIALAFAEAG---ADVLIAARTESQ--L-DEVAEQIR------------AAGRRAHVVAADLA   69 (263)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHH------------hcCCcEEEEEccCC
Confidence            568999999999999999999999999   589999986421  1 11111111            01246788999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc----CCCCCce
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC----VNLKRFC  175 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v  175 (177)
                      ++      +.+..+++       ++|+|||+||...       ..+.++..+++|+.++.++.+++.+.    .+..+||
T Consensus        70 ~~------~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv  143 (263)
T PRK07814         70 HP------EATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVI  143 (263)
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEE
Confidence            98      55655443       6899999998632       13567778999999999999998642    1445676


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       144 ~~  145 (263)
T PRK07814        144 NI  145 (263)
T ss_pred             EE
Confidence            53

>PLN02253 xanthoxin dehydrogenase

Probab=99.52  E-value=3e-13  Score=104.92  Aligned_cols=110  Identities=15%  Similarity=0.106  Sum_probs=82.4

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   ++|++++|+...  . +.+.+..            . ...++.++++|+
T Consensus        15 ~l~~k~~lItGas~gIG~~la~~l~~~G---~~v~~~~~~~~~--~-~~~~~~~------------~-~~~~~~~~~~Dl   75 (280)
T PLN02253         15 RLLGKVALVTGGATGIGESIVRLFHKHG---AKVCIVDLQDDL--G-QNVCDSL------------G-GEPNVCFFHCDV   75 (280)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHcC---CEEEEEeCCHHH--H-HHHHHHh------------c-CCCceEEEEeec
Confidence            4578999999999999999999999999   588888875421  1 1111110            0 124688999999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc---------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF---------DEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~---------~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      ++.      +++..+++       ++|++||+||....         .++++..+++|+.++.++++++.+
T Consensus        76 ~d~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  140 (280)
T PLN02253         76 TVE------DDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAAR  140 (280)
T ss_pred             CCH------HHHHHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHH
Confidence            998      56666554       68999999997421         356778899999999999887754

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.52  E-value=4.5e-13  Score=103.84  Aligned_cols=115  Identities=10%  Similarity=0.207  Sum_probs=85.0

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      .+++++||||+|+||+++++.|++.|   .+|++++|+..      .+......            ...++.++.+|+++
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g---~~V~~~~r~~~------~~~~~~~~------------~~~~~~~~~~D~~~   60 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERG---DRVVATARDTA------TLADLAEK------------YGDRLLPLALDVTD   60 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEECCHH------HHHHHHHh------------ccCCeeEEEccCCC
Confidence            46799999999999999999999998   58999888642      22221110            12457788999999


Q ss_pred             CCCCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHH----HhcCCCCCcee
Q psy17489        115 EHLGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLA----KECVNLKRFCE  176 (177)
Q Consensus       115 ~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~  176 (177)
                      .      +++..++       .++|++||+||....       .++++..+++|+.++..+++.+    ++. +.+++|+
T Consensus        61 ~------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~  133 (275)
T PRK08263         61 R------AAVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQ-RSGHIIQ  133 (275)
T ss_pred             H------HHHHHHHHHHHHHcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEE
Confidence            7      4554443       367999999997532       3577889999999998888876    344 5667876


Q ss_pred             C
Q psy17489        177 L  177 (177)
Q Consensus       177 v  177 (177)
                      +
T Consensus       134 v  134 (275)
T PRK08263        134 I  134 (275)
T ss_pred             E
Confidence            4

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.52  E-value=4.5e-13  Score=102.86  Aligned_cols=123  Identities=13%  Similarity=0.115  Sum_probs=87.5

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   ++|++++|++..  . +.+.+.+..          .....++.++.+|+
T Consensus         4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G---~~vv~~~r~~~~--~-~~~~~~~~~----------~~~~~~~~~~~~Dl   67 (260)
T PRK07063          4 RLAGKVALVTGAAQGIGAAIARAFAREG---AAVALADLDAAL--A-ERAAAAIAR----------DVAGARVLAVPADV   67 (260)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHHh----------ccCCceEEEEEccC
Confidence            3678999999999999999999999999   589988886421  1 111111110          00124678899999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCce
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFC  175 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v  175 (177)
                      +++      +++..+++       ++|++||+||...       ..++|+..+++|+.++..+++.+...   .+..++|
T Consensus        68 ~~~------~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv  141 (260)
T PRK07063         68 TDA------ASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIV  141 (260)
T ss_pred             CCH------HHHHHHHHHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEE
Confidence            998      55555443       6899999999642       13577888999999999998887531   1345676


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       142 ~i  143 (260)
T PRK07063        142 NI  143 (260)
T ss_pred             EE
Confidence            63

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.52  E-value=2.7e-13  Score=104.06  Aligned_cols=120  Identities=16%  Similarity=0.246  Sum_probs=87.3

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   ++|++++|++..    +.+.+....            ...++.++.+|+
T Consensus        12 ~l~~k~vlItGas~gIG~~ia~~l~~~G---~~v~~~~~~~~~----~~~~~~~~~------------~~~~~~~~~~D~   72 (258)
T PRK06935         12 SLDGKVAIVTGGNTGLGQGYAVALAKAG---ADIIITTHGTNW----DETRRLIEK------------EGRKVTFVQVDL   72 (258)
T ss_pred             cCCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCcHH----HHHHHHHHh------------cCCceEEEEcCC
Confidence            4678999999999999999999999999   588888886211    222222211            124688999999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCce
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFC  175 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v  175 (177)
                      ++.      +.+..+++       ++|++||+||...       ..+.++..+++|+.++..+.+.+.+.   .+..++|
T Consensus        73 ~~~------~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv  146 (258)
T PRK06935         73 TKP------ESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKII  146 (258)
T ss_pred             CCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEE
Confidence            998      55655544       6899999999743       14567788999999998888776532   1445676


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       147 ~i  148 (258)
T PRK06935        147 NI  148 (258)
T ss_pred             EE
Confidence            64

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.52  E-value=2.6e-13  Score=104.07  Aligned_cols=119  Identities=13%  Similarity=0.154  Sum_probs=83.4

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   .+|++++|++.   . ..+.+.+.            ....++.++.+|+
T Consensus         5 ~~~~k~vlVtGas~gIG~~la~~l~~~G---~~v~~~~r~~~---~-~~~~~~~~------------~~~~~~~~~~~D~   65 (260)
T PRK12823          5 RFAGKVVVVTGAAQGIGRGVALRAAAEG---ARVVLVDRSEL---V-HEVAAELR------------AAGGEALALTADL   65 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCchH---H-HHHHHHHH------------hcCCeEEEEEEeC
Confidence            4678999999999999999999999999   58888888632   1 11111111            0124577889999


Q ss_pred             CCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHH----hcCCCCC
Q psy17489        113 ESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAK----ECVNLKR  173 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~  173 (177)
                      ++.      +++..++       .++|++|||||...        ..+.++..+++|+.++..+++.+.    +. +..+
T Consensus        66 ~~~------~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~  138 (260)
T PRK12823         66 ETY------AGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQ-GGGA  138 (260)
T ss_pred             CCH------HHHHHHHHHHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCe
Confidence            997      4454443       36899999998531        135567788999999887766554    33 4567


Q ss_pred             ceeC
Q psy17489        174 FCEL  177 (177)
Q Consensus       174 ~v~v  177 (177)
                      ||++
T Consensus       139 iv~~  142 (260)
T PRK12823        139 IVNV  142 (260)
T ss_pred             EEEE
Confidence            7764

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.52  E-value=3.4e-13  Score=102.23  Aligned_cols=120  Identities=13%  Similarity=0.188  Sum_probs=87.1

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++++++||||+|+||.+++++|++.|   .+|++++|+...  . +.+.+...            ....++.++.+|+.
T Consensus         5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G---~~Vi~~~r~~~~--~-~~~~~~~~------------~~~~~~~~~~~D~~   66 (239)
T PRK07666          5 LQGKNALITGAGRGIGRAVAIALAKEG---VNVGLLARTEEN--L-KAVAEEVE------------AYGVKVVIATADVS   66 (239)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHH------------HhCCeEEEEECCCC
Confidence            457899999999999999999999999   589999987521  1 11111111            01246888999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCcee
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VNLKRFCE  176 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~  176 (177)
                      ++      +++..+++       ++|++||++|....       .+.+++.+++|+.++.++++.+...   .+.+++|+
T Consensus        67 ~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~  140 (239)
T PRK07666         67 DY------EEVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIIN  140 (239)
T ss_pred             CH------HHHHHHHHHHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEE
Confidence            98      56666554       78999999987432       3556778999999999998887642   14556776


Q ss_pred             C
Q psy17489        177 L  177 (177)
Q Consensus       177 v  177 (177)
                      +
T Consensus       141 ~  141 (239)
T PRK07666        141 I  141 (239)
T ss_pred             E
Confidence            3

>KOG1205|consensus

Probab=99.52  E-value=1.3e-13  Score=106.23  Aligned_cols=112  Identities=18%  Similarity=0.267  Sum_probs=83.5

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHH-HHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERV-KNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      .+.||+|+||||+++||.+++..|.+.|   .+++.++|.....   +++ +++.+.         .+ . .++..+++|
T Consensus         9 ~~~~kvVvITGASsGIG~~lA~~la~~G---~~l~lvar~~rrl---~~v~~~l~~~---------~~-~-~~v~~~~~D   71 (282)
T KOG1205|consen    9 RLAGKVVLITGASSGIGEALAYELAKRG---AKLVLVARRARRL---ERVAEELRKL---------GS-L-EKVLVLQLD   71 (282)
T ss_pred             HhCCCEEEEeCCCcHHHHHHHHHHHhCC---CceEEeehhhhhH---HHHHHHHHHh---------CC-c-CccEEEeCc
Confidence            4679999999999999999999999999   6777777765332   333 222110         11 1 168999999


Q ss_pred             CCCCCCCCCHHHHHHH-------hcCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        112 LESEHLGLSEDSEQLI-------KSKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~-------~~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      ++|.      ++.+++       +.++|++|||||....       ..+....+++|+.|+..+.+++..
T Consensus        72 vs~~------~~~~~~~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp  135 (282)
T KOG1205|consen   72 VSDE------ESVKKFVEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALP  135 (282)
T ss_pred             cCCH------HHHHHHHHHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHH
Confidence            9998      566644       4589999999998542       345566899999999999888754

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.51  E-value=6.4e-13  Score=100.93  Aligned_cols=123  Identities=13%  Similarity=0.152  Sum_probs=87.3

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|+++|   ++|++++|......  +........     +    .....++.++.+|+.
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~g---~~v~~~~~~~~~~~--~~~~~~~~~-----~----~~~~~~~~~~~~Dl~   69 (249)
T PRK12827          4 LDSRRVLITGGSGGLGRAIAVRLAADG---ADVIVLDIHPMRGR--AEADAVAAG-----I----EAAGGKALGLAFDVR   69 (249)
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCC---CeEEEEcCcccccH--HHHHHHHHH-----H----HhcCCcEEEEEccCC
Confidence            457899999999999999999999999   57888776432111  122211110     0    012346889999999


Q ss_pred             CCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHH-----hcCCCCCc
Q psy17489        114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAK-----ECVNLKRF  174 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~-----~~~~~~~~  174 (177)
                      +.      +.+..++       .++|+|||+||...       ..+.+...+++|+.++.++++++.     +. +.++|
T Consensus        70 ~~------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~i  142 (249)
T PRK12827         70 DF------AATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRAR-RGGRI  142 (249)
T ss_pred             CH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-CCeEE
Confidence            98      5665554       36899999999754       135577789999999999999987     33 55677


Q ss_pred             eeC
Q psy17489        175 CEL  177 (177)
Q Consensus       175 v~v  177 (177)
                      |++
T Consensus       143 v~~  145 (249)
T PRK12827        143 VNI  145 (249)
T ss_pred             EEE
Confidence            764

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.51  E-value=3.3e-13  Score=102.77  Aligned_cols=119  Identities=17%  Similarity=0.224  Sum_probs=86.2

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++++++||||+|+||+++++.|++.|   .+|++++|+...  . ..+.+...            ....++.++.+|+.
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g---~~v~~~~r~~~~--~-~~~~~~~~------------~~~~~~~~~~~d~~   62 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEG---AKVAVFDLNREA--A-EKVAADIR------------AKGGNAQAFACDIT   62 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEecCCHHH--H-HHHHHHHH------------hcCCcEEEEEcCCC
Confidence            357899999999999999999999998   588888886521  1 11211111            01246889999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCce
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAK----ECVNLKRFC  175 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v  175 (177)
                      +.      ++++.+++       ++|++||+|+...       ..+.++..+++|+.++.++++.+.    +. +.++||
T Consensus        63 ~~------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii  135 (250)
T TIGR03206        63 DR------DSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVER-GAGRIV  135 (250)
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEE
Confidence            87      56655543       5899999998642       134566789999999999988775    34 556777


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       136 ~i  137 (250)
T TIGR03206       136 NI  137 (250)
T ss_pred             EE
Confidence            64

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.51  E-value=2.3e-13  Score=107.09  Aligned_cols=122  Identities=11%  Similarity=0.096  Sum_probs=83.9

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   .+|++++|+...  ..+...++..         ..  ...++.++.+|+
T Consensus        13 ~~~~k~vlItGas~gIG~~~a~~l~~~G---~~vi~~~r~~~~--~~~~~~~l~~---------~~--~~~~~~~~~~Dl   76 (306)
T PRK06197         13 DQSGRVAVVTGANTGLGYETAAALAAKG---AHVVLAVRNLDK--GKAAAARITA---------AT--PGADVTLQELDL   76 (306)
T ss_pred             cCCCCEEEEcCCCCcHHHHHHHHHHHCC---CEEEEEeCCHHH--HHHHHHHHHH---------hC--CCCceEEEECCC
Confidence            3578999999999999999999999999   588888886421  1111111110         00  124678899999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-----hHHHHHHHHHhHHHHHHH----HHHHHhcCCCCCcee
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-----DEALQKAIRANLYATKQM----LNLAKECVNLKRFCE  176 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-----~~~~~~~~~~nv~~~~~l----l~~~~~~~~~~~~v~  176 (177)
                      ++.      +++..+++       ++|++|||||....     .+.++..+++|+.++..+    ++.+++. +..+||+
T Consensus        77 ~d~------~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-~~~~iV~  149 (306)
T PRK06197         77 TSL------ASVRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPV-PGSRVVT  149 (306)
T ss_pred             CCH------HHHHHHHHHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhC-CCCEEEE
Confidence            998      55555443       68999999997432     235567789999995554    4445554 4568887


Q ss_pred             C
Q psy17489        177 L  177 (177)
Q Consensus       177 v  177 (177)
                      +
T Consensus       150 v  150 (306)
T PRK06197        150 V  150 (306)
T ss_pred             E
Confidence            4

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.51  E-value=3.6e-13  Score=103.34  Aligned_cols=120  Identities=17%  Similarity=0.177  Sum_probs=86.3

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++++++||||+|+||.++++.|++.|   .+|+.++|+...  . +...+.+.            ....++.++.+|++
T Consensus        10 ~~~k~ilItGa~g~IG~~la~~l~~~G---~~V~~~~r~~~~--~-~~~~~~i~------------~~~~~~~~~~~Dl~   71 (259)
T PRK08213         10 LSGKTALVTGGSRGLGLQIAEALGEAG---ARVVLSARKAEE--L-EEAAAHLE------------ALGIDALWIAADVA   71 (259)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHcC---CEEEEEeCCHHH--H-HHHHHHHH------------hcCCeEEEEEccCC
Confidence            468999999999999999999999998   588888886421  1 11111111            01246788999999


Q ss_pred             CCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc----CCCCCce
Q psy17489        114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC----VNLKRFC  175 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v  175 (177)
                      ++      +.+..++       .++|++||+||...       ..+.+++.+++|+.++.++++++.+.    ++..+||
T Consensus        72 d~------~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v  145 (259)
T PRK08213         72 DE------ADIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRII  145 (259)
T ss_pred             CH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEE
Confidence            98      5665443       35899999999642       23567778999999999999977543    2445777


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       146 ~~  147 (259)
T PRK08213        146 NV  147 (259)
T ss_pred             EE
Confidence            64

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.51  E-value=5.2e-13  Score=104.66  Aligned_cols=120  Identities=15%  Similarity=0.204  Sum_probs=85.8

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++++++||||+|+||.++++.|++.|   ++|++++|+.+.  . +.+.+...            ....++.++.+|+
T Consensus        37 ~~~~k~vlItGasggIG~~la~~La~~G---~~Vi~~~R~~~~--l-~~~~~~l~------------~~~~~~~~~~~Dl   98 (293)
T PRK05866         37 DLTGKRILLTGASSGIGEAAAEQFARRG---ATVVAVARREDL--L-DAVADRIT------------RAGGDAMAVPCDL   98 (293)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHH--H-HHHHHHHH------------hcCCcEEEEEccC
Confidence            3567999999999999999999999998   589999987421  1 11111111            0124577899999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc---------hHHHHHHHHHhHHHHHHHHHHHH----hcCCCC
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF---------DEALQKAIRANLYATKQMLNLAK----ECVNLK  172 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~---------~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~  172 (177)
                      .+.      +++..+++       ++|++|||||....         .+.++..+++|+.++.++++.+.    +. +..
T Consensus        99 ~d~------~~v~~~~~~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g  171 (293)
T PRK05866         99 SDL------DAVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLER-GDG  171 (293)
T ss_pred             CCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCc
Confidence            998      56655554       78999999997531         23456678999999988887654    44 456


Q ss_pred             CceeC
Q psy17489        173 RFCEL  177 (177)
Q Consensus       173 ~~v~v  177 (177)
                      ++|++
T Consensus       172 ~iv~i  176 (293)
T PRK05866        172 HIINV  176 (293)
T ss_pred             EEEEE
Confidence            77764

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.50  E-value=2.9e-13  Score=103.30  Aligned_cols=117  Identities=15%  Similarity=0.166  Sum_probs=84.6

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +++++||||+|+||+++++.|++.|   .+|++++|+....   +.+......            ...++.++.+|+.+.
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g---~~v~~~~r~~~~~---~~~~~~~~~------------~~~~~~~~~~D~~~~   62 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAG---ANVVVNDLGEAGA---EAAAKVATD------------AGGSVIYLVADVTKE   62 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHHHh------------cCCceEEEECCCCCH
Confidence            4789999999999999999999999   5899999874211   122221110            124688899999997


Q ss_pred             CCCCCHHHHHHH-------hcCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHH----HhcCCCCCceeC
Q psy17489        116 HLGLSEDSEQLI-------KSKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLA----KECVNLKRFCEL  177 (177)
Q Consensus       116 ~~~~~~~~~~~~-------~~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~v  177 (177)
                            +++..+       +.++|+|||+|+....       .++++..++.|+.++..+++.+    ++. +.++|||+
T Consensus        63 ------~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~~~v~~  135 (255)
T TIGR01963        63 ------DEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQ-GWGRIINI  135 (255)
T ss_pred             ------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEE
Confidence                  544333       3468999999987432       3456678899999988888876    445 66788874

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.50  E-value=5e-13  Score=101.85  Aligned_cols=118  Identities=10%  Similarity=0.099  Sum_probs=85.8

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++++++||||+|+||+++++.|++.|   ++|++++|+..      ........     +    . ...++.++++|++
T Consensus         3 ~~~k~~lItG~sg~iG~~la~~l~~~G---~~v~~~~r~~~------~~~~~~~~-----~----~-~~~~~~~~~~D~~   63 (252)
T PRK06138          3 LAGRVAIVTGAGSGIGRATAKLFAREG---ARVVVADRDAE------AAERVAAA-----I----A-AGGRAFARQGDVG   63 (252)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCC---CeEEEecCCHH------HHHHHHHH-----H----h-cCCeEEEEEcCCC
Confidence            468999999999999999999999998   58999888742      11111110     0    0 1245788999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCce
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAK----ECVNLKRFC  175 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v  175 (177)
                      |+      +++.++++       ++|+|||+++...       ..+.++..+++|+.++.++.+.+.    +. +.++||
T Consensus        64 ~~------~~~~~~~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii  136 (252)
T PRK06138         64 SA------EAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQ-GGGSIV  136 (252)
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhc-CCeEEE
Confidence            98      56665543       6899999999743       235567789999999988777653    44 556777


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       137 ~~  138 (252)
T PRK06138        137 NT  138 (252)
T ss_pred             EE
Confidence            64

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.50  E-value=4.2e-13  Score=105.29  Aligned_cols=117  Identities=20%  Similarity=0.367  Sum_probs=84.7

Q ss_pred             eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCC
Q psy17489         38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHL  117 (177)
Q Consensus        38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~  117 (177)
                      +|+||||+|+||.+++++|++.|.+ .+|++++|...... .+.+....              ...++.++.+|+.++  
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~-~~v~~~~~~~~~~~-~~~~~~~~--------------~~~~~~~~~~Dl~~~--   62 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPD-AEVIVLDKLTYAGN-LENLADLE--------------DNPRYRFVKGDIGDR--   62 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCC-CEEEEecCCCcchh-hhhhhhhc--------------cCCCcEEEEcCCcCH--
Confidence            5899999999999999999998632 37888776421111 11111110              113678899999998  


Q ss_pred             CCCHHHHHHHhcC--CcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhcCCCC-CceeC
Q psy17489        118 GLSEDSEQLIKSK--VNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKECVNLK-RFCEL  177 (177)
Q Consensus       118 ~~~~~~~~~~~~~--~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~~~~~-~~v~v  177 (177)
                          +.+..+++.  +|+|||+|+.....   +.+..++++|+.++.+++++|.+. ..+ ++||+
T Consensus        63 ----~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~i~~  123 (317)
T TIGR01181        63 ----ELVSRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKY-WHEFRFHHI  123 (317)
T ss_pred             ----HHHHHHHhhcCCCEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhc-CCCceEEEe
Confidence                788888876  89999999975432   345567899999999999999886 333 67763

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK06196 oxidoreductase; Provisional

Probab=99.50  E-value=4.8e-13  Score=105.75  Aligned_cols=116  Identities=16%  Similarity=0.191  Sum_probs=84.4

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   .+|++++|+..      ...+....             ..++.++.+|+
T Consensus        23 ~l~~k~vlITGasggIG~~~a~~L~~~G---~~Vv~~~R~~~------~~~~~~~~-------------l~~v~~~~~Dl   80 (315)
T PRK06196         23 DLSGKTAIVTGGYSGLGLETTRALAQAG---AHVIVPARRPD------VAREALAG-------------IDGVEVVMLDL   80 (315)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHH------HHHHHHHH-------------hhhCeEEEccC
Confidence            3578999999999999999999999999   58999888642      22221110             12377899999


Q ss_pred             CCCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc-----hHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCcee
Q psy17489        113 ESEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF-----DEALQKAIRANLYATKQMLNLAK----ECVNLKRFCE  176 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-----~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~  176 (177)
                      ++.      ++++.++       .++|++|||||....     .+.++..+++|+.++..+++.+.    +. +..++|+
T Consensus        81 ~d~------~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-~~~~iV~  153 (315)
T PRK06196         81 ADL------ESVRAFAERFLDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAG-AGARVVA  153 (315)
T ss_pred             CCH------HHHHHHHHHHHhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCeEEE
Confidence            998      5665544       368999999997431     24567789999999877777543    33 4457776


Q ss_pred             C
Q psy17489        177 L  177 (177)
Q Consensus       177 v  177 (177)
                      +
T Consensus       154 v  154 (315)
T PRK06196        154 L  154 (315)
T ss_pred             E
Confidence            4

>PRK05865 hypothetical protein; Provisional

Probab=99.50  E-value=2.2e-13  Score=119.00  Aligned_cols=101  Identities=21%  Similarity=0.278  Sum_probs=84.6

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+++||||+||||+++++.|++.|   ++|++++|+....                        ...++.++.+|+.+. 
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G---~~Vv~l~R~~~~~------------------------~~~~v~~v~gDL~D~-   52 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQG---HEVVGIARHRPDS------------------------WPSSADFIAADIRDA-   52 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCc---CEEEEEECCchhh------------------------cccCceEEEeeCCCH-
Confidence            579999999999999999999999   5888888864210                        013577899999998 


Q ss_pred             CCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        117 LGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       117 ~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                           +.+..+++++|+|||+|+....      .+++|+.++.+++++|++. ++++|||+
T Consensus        53 -----~~l~~al~~vD~VVHlAa~~~~------~~~vNv~GT~nLLeAa~~~-gvkr~V~i  101 (854)
T PRK05865         53 -----TAVESAMTGADVVAHCAWVRGR------NDHINIDGTANVLKAMAET-GTGRIVFT  101 (854)
T ss_pred             -----HHHHHHHhCCCEEEECCCcccc------hHHHHHHHHHHHHHHHHHc-CCCeEEEE
Confidence                 7888888999999999986432      4689999999999999998 88999985

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.50  E-value=8.9e-13  Score=100.85  Aligned_cols=119  Identities=11%  Similarity=0.105  Sum_probs=84.7

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|.+.|   ++|++++|++..  . +.+.+.+.            ....++.++.+|++
T Consensus         4 ~~~k~~lItGas~giG~~ia~~l~~~G---~~v~~~~r~~~~--~-~~~~~~~~------------~~~~~~~~~~~D~~   65 (254)
T PRK07478          4 LNGKVAIITGASSGIGRAAAKLFAREG---AKVVVGARRQAE--L-DQLVAEIR------------AEGGEAVALAGDVR   65 (254)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHH------------hcCCcEEEEEcCCC
Confidence            467899999999999999999999999   589999887521  1 11111111            01246788999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc--------hHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCc
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF--------DEALQKAIRANLYATKQMLNLAK----ECVNLKRF  174 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~--------~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~  174 (177)
                      +.      +++..+++       ++|++||+||....        .++++..+++|+.++..+.+.+.    +. +..++
T Consensus        66 ~~------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~-~~~~i  138 (254)
T PRK07478         66 DE------AYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLAR-GGGSL  138 (254)
T ss_pred             CH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceE
Confidence            98      55555443       68999999997421        25677889999999888866543    33 44567


Q ss_pred             eeC
Q psy17489        175 CEL  177 (177)
Q Consensus       175 v~v  177 (177)
                      |++
T Consensus       139 v~~  141 (254)
T PRK07478        139 IFT  141 (254)
T ss_pred             EEE
Confidence            653

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.49  E-value=8.4e-13  Score=100.87  Aligned_cols=120  Identities=18%  Similarity=0.222  Sum_probs=83.0

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEE-EeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM-VRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      +++++++||||+|+||+++++.|+++|   ..|++. .|+..  ...+.......             ...++.++.+|+
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~G---~~v~i~~~r~~~--~~~~~~~~~~~-------------~~~~~~~~~~D~   65 (254)
T PRK12746          4 LDGKVALVTGASRGIGRAIAMRLANDG---ALVAIHYGRNKQ--AADETIREIES-------------NGGKAFLIEADL   65 (254)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEcCCCHH--HHHHHHHHHHh-------------cCCcEEEEEcCc
Confidence            467899999999999999999999998   466654 45431  11111111100             124678899999


Q ss_pred             CCCCCCCCHHHHHHHhc-------------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc-CCC
Q psy17489        113 ESEHLGLSEDSEQLIKS-------------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC-VNL  171 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~-~~~  171 (177)
                      ++.      +++..+++             ++|++||+||....       ...++..+++|+.++.++++.+.+. .+.
T Consensus        66 ~d~------~~i~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~  139 (254)
T PRK12746         66 NSI------DGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAE  139 (254)
T ss_pred             CCH------HHHHHHHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC
Confidence            998      56655444             58999999997432       2345677899999999999988763 133


Q ss_pred             CCceeC
Q psy17489        172 KRFCEL  177 (177)
Q Consensus       172 ~~~v~v  177 (177)
                      .+||++
T Consensus       140 ~~~v~~  145 (254)
T PRK12746        140 GRVINI  145 (254)
T ss_pred             CEEEEE
Confidence            466653

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.49  E-value=3.9e-13  Score=102.77  Aligned_cols=117  Identities=15%  Similarity=0.212  Sum_probs=86.2

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++++++||||+|+||.++++.|++.|   .+|+.++|+...   .+...+.               ...++.++.+|++
T Consensus        13 ~~~k~vlItGas~~IG~~la~~l~~~G---~~Vi~~~r~~~~---~~~~~~~---------------~~~~~~~~~~Dl~   71 (255)
T PRK06841         13 LSGKVAVVTGGASGIGHAIAELFAAKG---ARVALLDRSEDV---AEVAAQL---------------LGGNAKGLVCDVS   71 (255)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHh---------------hCCceEEEEecCC
Confidence            678999999999999999999999999   588988886531   1111111               1135678899999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCcee
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VNLKRFCE  176 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~  176 (177)
                      +.      +++..+++       ++|++||+||....       .+.++..+++|+.++.++++.+...   .+..+||+
T Consensus        72 ~~------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~  145 (255)
T PRK06841         72 DS------QSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVN  145 (255)
T ss_pred             CH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEE
Confidence            87      55555443       68999999997532       3566778999999999999987642   14567876


Q ss_pred             C
Q psy17489        177 L  177 (177)
Q Consensus       177 v  177 (177)
                      +
T Consensus       146 ~  146 (255)
T PRK06841        146 L  146 (255)
T ss_pred             E
Confidence            4

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.49  E-value=7.3e-13  Score=101.48  Aligned_cols=120  Identities=14%  Similarity=0.160  Sum_probs=87.0

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++++++||||+|+||.++++.|++.|   .+|++++|++...   +...+...             ...++.++.+|+
T Consensus         4 ~l~~~~ilItGasggiG~~la~~l~~~G---~~v~~~~r~~~~~---~~~~~~~~-------------~~~~~~~~~~D~   64 (258)
T PRK08628          4 NLKDKVVIVTGGASGIGAAISLRLAEEG---AIPVIFGRSAPDD---EFAEELRA-------------LQPRAEFVQVDL   64 (258)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHcC---CcEEEEcCChhhH---HHHHHHHh-------------cCCceEEEEccC
Confidence            3678999999999999999999999999   5788888875322   11111111             124688899999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC------chHHHHHHHHHhHHHHHHHHHHHHhc--CCCCCceeC
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR------FDEALQKAIRANLYATKQMLNLAKEC--VNLKRFCEL  177 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~------~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~v  177 (177)
                      ++.      +++..+++       ++|++||+||...      ..++++..+++|+.++.++.+.+.+.  .+..+||++
T Consensus        65 ~~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~  138 (258)
T PRK08628         65 TDD------AQCRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNI  138 (258)
T ss_pred             CCH------HHHHHHHHHHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEE
Confidence            998      55555543       6899999999532      12567788999999999998887542  133567764

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.49  E-value=1.8e-12  Score=101.49  Aligned_cols=123  Identities=19%  Similarity=0.194  Sum_probs=87.7

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      ..+++|+++||||+|+||.++++.|++.|   .+|++++|+...  ..+.+.+....            ...++.++.+|
T Consensus        42 ~~~~~k~iLItGasggIG~~la~~l~~~G---~~V~l~~r~~~~--~~~~~~~~~~~------------~~~~~~~~~~D  104 (290)
T PRK06701         42 GKLKGKVALITGGDSGIGRAVAVLFAKEG---ADIAIVYLDEHE--DANETKQRVEK------------EGVKCLLIPGD  104 (290)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCcch--HHHHHHHHHHh------------cCCeEEEEEcc
Confidence            45678999999999999999999999999   588888886522  11222221110            12467889999


Q ss_pred             CCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc--------hHHHHHHHHHhHHHHHHHHHHHHhc-CCCCCce
Q psy17489        112 LESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF--------DEALQKAIRANLYATKQMLNLAKEC-VNLKRFC  175 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~--------~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v  175 (177)
                      +++.      +.+..+++       ++|++||+|+....        .+.+...+++|+.++.++++.+.+. ....+||
T Consensus       105 l~~~------~~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV  178 (290)
T PRK06701        105 VSDE------AFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAII  178 (290)
T ss_pred             CCCH------HHHHHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEE
Confidence            9997      55555443       68999999996421        3566778999999999999998753 1224666


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       179 ~i  180 (290)
T PRK06701        179 NT  180 (290)
T ss_pred             EE
Confidence            53

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.49  E-value=8.5e-13  Score=102.50  Aligned_cols=120  Identities=13%  Similarity=0.134  Sum_probs=85.8

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +.+|+++||||+|+||+++++.|++.|   .+|++.+|+...  . +.+.+.+.            ....++.++.+|++
T Consensus         4 ~~~k~vlVTGas~gIG~ala~~La~~G---~~Vv~~~r~~~~--l-~~~~~~l~------------~~~~~~~~~~~Dv~   65 (275)
T PRK05876          4 FPGRGAVITGGASGIGLATGTEFARRG---ARVVLGDVDKPG--L-RQAVNHLR------------AEGFDVHGVMCDVR   65 (275)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHH------------hcCCeEEEEeCCCC
Confidence            568999999999999999999999999   578888876421  1 11111111            01245788999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh----cCCCCCce
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE----CVNLKRFC  175 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v  175 (177)
                      +.      +++..+++       ++|++|||||...       ..+.++..+++|+.++.++++.+..    .+...++|
T Consensus        66 d~------~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv  139 (275)
T PRK05876         66 HR------EEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVV  139 (275)
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEE
Confidence            98      56655543       5899999999742       1356778899999999999988753    31235676


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       140 ~i  141 (275)
T PRK05876        140 FT  141 (275)
T ss_pred             Ee
Confidence            54

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.49  E-value=7.2e-13  Score=100.28  Aligned_cols=119  Identities=18%  Similarity=0.245  Sum_probs=86.1

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +.+++++||||+|++|.++++.|.++|   .+|+.++|++...   +.+.+...            ....++.++.+|+.
T Consensus         3 ~~~~~ilItGasg~iG~~l~~~l~~~g---~~v~~~~r~~~~~---~~~~~~~~------------~~~~~~~~~~~D~~   64 (246)
T PRK05653          3 LQGKTALVTGASRGIGRAIALRLAADG---AKVVIYDSNEEAA---EALAAELR------------AAGGEARVLVFDVS   64 (246)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCChhHH---HHHHHHHH------------hcCCceEEEEccCC
Confidence            346899999999999999999999999   4788888875321   11111111            12346888999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCce
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAK----ECVNLKRFC  175 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v  175 (177)
                      ++      +++..+++       .+|+|||++|....       .+.+...+++|+.+..++++.+.    +. +.++||
T Consensus        65 ~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~ii  137 (246)
T PRK05653         65 DE------AAVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKA-RYGRIV  137 (246)
T ss_pred             CH------HHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEE
Confidence            98      55555443       57999999987432       34566789999999999988874    44 567887


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       138 ~~  139 (246)
T PRK05653        138 NI  139 (246)
T ss_pred             EE
Confidence            64

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.49  E-value=4.2e-13  Score=103.03  Aligned_cols=116  Identities=12%  Similarity=0.039  Sum_probs=84.2

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +|+++||||+|+||.++++.|++.|   .+|++++|+..      .+.+....         .  ...++.++.+|+.+.
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~G---~~V~~~~r~~~------~~~~~~~~---------~--~~~~~~~~~~D~~~~   60 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAEG---WRVGAYDINEA------GLAALAAE---------L--GAGNAWTGALDVTDR   60 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCC---CeEEEEeCCHH------HHHHHHHH---------h--cCCceEEEEecCCCH
Confidence            3689999999999999999999999   58999888652      22222110         0  024688999999997


Q ss_pred             CCCCCHHHHHHHhc--------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCceeC
Q psy17489        116 HLGLSEDSEQLIKS--------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VNLKRFCEL  177 (177)
Q Consensus       116 ~~~~~~~~~~~~~~--------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~v  177 (177)
                            +++.++++        ++|+||||||....       .++++..+++|+.++.++++.+...   .+..+||++
T Consensus        61 ------~~v~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~i  134 (260)
T PRK08267         61 ------AAWDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINT  134 (260)
T ss_pred             ------HHHHHHHHHHHHHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEe
Confidence                  55555433        57999999997531       3567788999999999998887431   144567764

>PLN02778 3,5-epimerase/4-reductase

Probab=99.49  E-value=2.7e-13  Score=106.51  Aligned_cols=92  Identities=22%  Similarity=0.167  Sum_probs=67.3

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      .|+++||||+||||+++++.|+++|+   +|+...+                                       |+.+.
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~---~V~~~~~---------------------------------------~~~~~   46 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGI---DFHYGSG---------------------------------------RLENR   46 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCC---EEEEecC---------------------------------------ccCCH
Confidence            47899999999999999999999984   5543211                                       11121


Q ss_pred             CCCCCHHHHHHHhc--CCcEEEEcCcccCc------hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCcee
Q psy17489        116 HLGLSEDSEQLIKS--KVNIIFHCAASLRF------DEALQKAIRANLYATKQMLNLAKECVNLKRFCE  176 (177)
Q Consensus       116 ~~~~~~~~~~~~~~--~~d~vi~~aa~~~~------~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~  176 (177)
                            +.+...+.  ++|+|||+||..+.      ..+...++++|+.++.+++++|++. +++++++
T Consensus        47 ------~~v~~~l~~~~~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~-gv~~v~~  108 (298)
T PLN02778         47 ------ASLEADIDAVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRER-GLVLTNY  108 (298)
T ss_pred             ------HHHHHHHHhcCCCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEE
Confidence                  22333333  68999999998642      1345678899999999999999998 7866554

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.49  E-value=6.1e-13  Score=101.23  Aligned_cols=118  Identities=12%  Similarity=0.159  Sum_probs=86.4

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++++++||||+|+||.++++.|++.|   ++|++++|+...  . +.+.....             ...++.++.+|+.
T Consensus         3 ~~~~~vlItGasg~iG~~l~~~l~~~G---~~V~~~~r~~~~--~-~~~~~~~~-------------~~~~~~~~~~D~~   63 (251)
T PRK07231          3 LEGKVAIVTGASSGIGEGIARRFAAEG---ARVVVTDRNEEA--A-ERVAAEIL-------------AGGRAIAVAADVS   63 (251)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHh-------------cCCeEEEEECCCC
Confidence            467899999999999999999999999   579999997622  1 11111111             0245788999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHh----cCCCCCc
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKE----CVNLKRF  174 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~  174 (177)
                      +.      +++..+++       ++|+|||+|+...        ..+.++..+++|+.++..+++.+..    . +.++|
T Consensus        64 ~~------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~i  136 (251)
T PRK07231         64 DE------ADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGE-GGGAI  136 (251)
T ss_pred             CH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCcEE
Confidence            98      56665543       6799999999742        1355677899999998888877654    3 55677


Q ss_pred             eeC
Q psy17489        175 CEL  177 (177)
Q Consensus       175 v~v  177 (177)
                      |++
T Consensus       137 v~~  139 (251)
T PRK07231        137 VNV  139 (251)
T ss_pred             EEE
Confidence            764

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.49  E-value=8.1e-13  Score=100.51  Aligned_cols=120  Identities=16%  Similarity=0.123  Sum_probs=86.1

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++++++||||+|+||.++++.|++.|   ++|++++|++..  . ..+.+...            ....++.++.+|+.
T Consensus         5 ~~~~~vlItGa~g~iG~~la~~l~~~G---~~v~~~~r~~~~--~-~~~~~~~~------------~~~~~~~~~~~Dl~   66 (250)
T PRK12939          5 LAGKRALVTGAARGLGAAFAEALAEAG---ATVAFNDGLAAE--A-RELAAALE------------AAGGRAHAIAADLA   66 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcC---CEEEEEeCCHHH--H-HHHHHHHH------------hcCCcEEEEEccCC
Confidence            568999999999999999999999999   578888776421  1 11111111            01246888999999


Q ss_pred             CCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCcee
Q psy17489        114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VNLKRFCE  176 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~  176 (177)
                      +.      +++..++       .++|++||++|....       .+.++..+++|+.++.++++.+.+.   .+..+||+
T Consensus        67 ~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~  140 (250)
T PRK12939         67 DP------ASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVN  140 (250)
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEE
Confidence            97      5665554       368999999997431       3566778899999999999887542   12347776


Q ss_pred             C
Q psy17489        177 L  177 (177)
Q Consensus       177 v  177 (177)
                      +
T Consensus       141 i  141 (250)
T PRK12939        141 L  141 (250)
T ss_pred             E
Confidence            4

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.49  E-value=6.4e-13  Score=102.10  Aligned_cols=119  Identities=13%  Similarity=0.125  Sum_probs=85.6

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +.+++++||||+|+||.++++.|++.|   ++|++++|+..   ..+.......             ...++.++.+|+.
T Consensus         4 ~~~~~~lItG~s~giG~~la~~l~~~G---~~Vv~~~r~~~---~~~~~~~~~~-------------~~~~~~~~~~Dl~   64 (263)
T PRK08226          4 LTGKTALITGALQGIGEGIARVFARHG---ANLILLDISPE---IEKLADELCG-------------RGHRCTAVVADVR   64 (263)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEecCCHH---HHHHHHHHHH-------------hCCceEEEECCCC
Confidence            467999999999999999999999999   58888888642   1111111111             1246788999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCcee
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VNLKRFCE  176 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~  176 (177)
                      ++      +++..+++       ++|++||+||....       .+.+++.+++|+.++.++++.+.+.   .+..+||+
T Consensus        65 ~~------~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~  138 (263)
T PRK08226         65 DP------ASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVM  138 (263)
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence            98      55555443       68999999997432       3556778999999999999886542   13456765


Q ss_pred             C
Q psy17489        177 L  177 (177)
Q Consensus       177 v  177 (177)
                      +
T Consensus       139 i  139 (263)
T PRK08226        139 M  139 (263)
T ss_pred             E
Confidence            3

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.48  E-value=1.3e-12  Score=101.19  Aligned_cols=121  Identities=12%  Similarity=0.121  Sum_probs=85.6

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+.+|+++||||+|+||.++++.|+++|   .+|++.+|+...  . ..+.....            ....++.++.+|+
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G---~~V~~~~r~~~~--~-~~~~~~~~------------~~~~~~~~~~~Dl   68 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAG---FPVALGARRVEK--C-EELVDKIR------------ADGGEAVAFPLDV   68 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHH------------hcCCeEEEEECCC
Confidence            4567899999999999999999999999   578888876421  1 11111111            0124678889999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCce
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VNLKRFC  175 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v  175 (177)
                      ++.      +++..+++       ++|++||+||....       .+.++..+++|+.++.++++.+...   .+..+||
T Consensus        69 ~~~------~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv  142 (274)
T PRK07775         69 TDP------DSVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLI  142 (274)
T ss_pred             CCH------HHHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEE
Confidence            998      56655543       67999999997532       2456677899999999998886531   1445677


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       143 ~i  144 (274)
T PRK07775        143 FV  144 (274)
T ss_pred             EE
Confidence            64

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.48  E-value=9.6e-13  Score=100.94  Aligned_cols=112  Identities=18%  Similarity=0.234  Sum_probs=83.9

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      ..+++|+++||||+|+||.++++.|.+.|   .+|++++|+....                        ...++.++.+|
T Consensus         5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G---~~v~~~~r~~~~~------------------------~~~~~~~~~~D   57 (260)
T PRK06523          5 LELAGKRALVTGGTKGIGAATVARLLEAG---ARVVTTARSRPDD------------------------LPEGVEFVAAD   57 (260)
T ss_pred             cCCCCCEEEEECCCCchhHHHHHHHHHCC---CEEEEEeCChhhh------------------------cCCceeEEecC
Confidence            34678999999999999999999999999   5899998865211                        11357889999


Q ss_pred             CCCCCCCCCHHHHHHH-------hcCCcEEEEcCcccC---------chHHHHHHHHHhHHHHHHHHHHHH----hcCCC
Q psy17489        112 LESEHLGLSEDSEQLI-------KSKVNIIFHCAASLR---------FDEALQKAIRANLYATKQMLNLAK----ECVNL  171 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~-------~~~~d~vi~~aa~~~---------~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~  171 (177)
                      +.+.      +.+..+       +.++|++||+||...         ..+.++..+++|+.++.++.+.+.    +. +.
T Consensus        58 ~~~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~  130 (260)
T PRK06523         58 LTTA------EGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIAR-GS  130 (260)
T ss_pred             CCCH------HHHHHHHHHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-CC
Confidence            9997      444433       346899999999531         235677889999999988877654    33 44


Q ss_pred             CCceeC
Q psy17489        172 KRFCEL  177 (177)
Q Consensus       172 ~~~v~v  177 (177)
                      .++|++
T Consensus       131 g~ii~i  136 (260)
T PRK06523        131 GVIIHV  136 (260)
T ss_pred             cEEEEE
Confidence            567653

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.48  E-value=8e-13  Score=101.29  Aligned_cols=107  Identities=14%  Similarity=0.204  Sum_probs=81.7

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +.+++++||||+|+||.++++.|++.|   ++|++++|+..      ...+....            ...++.++.+|++
T Consensus         4 l~~~~vlItGas~~iG~~ia~~l~~~G---~~v~~~~r~~~------~~~~~~~~------------~~~~~~~~~~D~~   62 (257)
T PRK07067          4 LQGKVALLTGAASGIGEAVAERYLAEG---ARVVIADIKPA------RARLAALE------------IGPAAIAVSLDVT   62 (257)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcC---CEEEEEcCCHH------HHHHHHHH------------hCCceEEEEccCC
Confidence            567899999999999999999999999   58998888642      22221110            1135788999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      +.      +++..+++       ++|++||+||....       .++++..+++|+.++.++++++..
T Consensus        63 ~~------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  124 (257)
T PRK07067         63 RQ------DSIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVAR  124 (257)
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHH
Confidence            98      55555543       68999999996431       356778899999999999999864

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.48  E-value=1.3e-12  Score=99.82  Aligned_cols=113  Identities=13%  Similarity=0.182  Sum_probs=82.7

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+++||||+|+||.++++.|++.|   ++|++++|++.      .+......            ...++.++.+|+.+. 
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G---~~V~~~~r~~~------~~~~~~~~------------~~~~~~~~~~Dl~~~-   58 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQG---HKVIATGRRQE------RLQELKDE------------LGDNLYIAQLDVRNR-   58 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCC---CEEEEEECCHH------HHHHHHHH------------hccceEEEEecCCCH-
Confidence            579999999999999999999999   58999988652      22222110            124678899999998 


Q ss_pred             CCCCHHHHHHHhc-------CCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCceeC
Q psy17489        117 LGLSEDSEQLIKS-------KVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAK----ECVNLKRFCEL  177 (177)
Q Consensus       117 ~~~~~~~~~~~~~-------~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~v  177 (177)
                           +++..+++       ++|++||+||...        ..+++++.+++|+.++..+++.+.    +. +.++||++
T Consensus        59 -----~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~i  132 (248)
T PRK10538         59 -----AAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVER-NHGHIINI  132 (248)
T ss_pred             -----HHHHHHHHHHHHHcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEE
Confidence                 55555443       6899999998642        235677889999999887777654    33 55677764

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.48  E-value=5.9e-13  Score=101.89  Aligned_cols=120  Identities=13%  Similarity=0.187  Sum_probs=86.4

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +.+|+++||||+|+||.++++.|++.|   ++|++++|++..  . +.+.....            ....++.++.+|++
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G---~~V~~~~r~~~~--~-~~~~~~~~------------~~~~~~~~~~~D~~   64 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAG---ADVVLAARTAER--L-DEVAAEID------------DLGRRALAVPTDIT   64 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcC---CEEEEEeCCHHH--H-HHHHHHHH------------HhCCceEEEecCCC
Confidence            467999999999999999999999999   589999886521  1 11211111            01246788999999


Q ss_pred             CCCCCCCHHHHHHHh-------cCCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHhc--CCCCCcee
Q psy17489        114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKEC--VNLKRFCE  176 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~  176 (177)
                      +.      +++..++       .++|++||+||...        ..+.++..+++|+.++..+++++...  ...++||+
T Consensus        65 ~~------~~~~~~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~  138 (258)
T PRK07890         65 DE------DQCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVM  138 (258)
T ss_pred             CH------HHHHHHHHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEE
Confidence            87      5555443       46899999998642        13567788999999999999998652  12246765


Q ss_pred             C
Q psy17489        177 L  177 (177)
Q Consensus       177 v  177 (177)
                      +
T Consensus       139 ~  139 (258)
T PRK07890        139 I  139 (258)
T ss_pred             E
Confidence            3

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.48  E-value=1.3e-12  Score=98.97  Aligned_cols=120  Identities=15%  Similarity=0.247  Sum_probs=85.6

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +.+|+++||||+|+||+++++.|++.|   ++|+++.|+...  ..+.+.+...            ....++.++.+|+.
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g---~~v~~~~~~~~~--~~~~~~~~~~------------~~~~~~~~~~~D~~   66 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAG---ADVVVHYRSDEE--AAEELVEAVE------------ALGRRAQAVQADVT   66 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCC---CeEEEEeCCCHH--HHHHHHHHHH------------hcCCceEEEECCcC
Confidence            346899999999999999999999999   467666665421  1111221111            01246889999999


Q ss_pred             CCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCce
Q psy17489        114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAK----ECVNLKRFC  175 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v  175 (177)
                      +.      +.+..++       .++|++||+||...       ..+.++..+++|+.++.++++.+.    +. +.++||
T Consensus        67 ~~------~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~i  139 (249)
T PRK12825         67 DK------AALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQ-RGGRIV  139 (249)
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEE
Confidence            98      5665554       36799999999642       234567789999999999998873    44 567888


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       140 ~~  141 (249)
T PRK12825        140 NI  141 (249)
T ss_pred             EE
Confidence            74

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.48  E-value=5.3e-13  Score=103.48  Aligned_cols=120  Identities=13%  Similarity=0.194  Sum_probs=85.0

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      ++++++||||+|++|.++++.|+++|   ++|++++|+....   +.+.+....          .....++.++.+|+++
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G---~~V~~~~r~~~~~---~~~~~~~~~----------~~~~~~~~~~~~D~~d   65 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKG---YLVIATMRNPEKQ---ENLLSQATQ----------LNLQQNIKVQQLDVTD   65 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCC---CEEEEEeCCHHHH---HHHHHHHHh----------cCCCCceeEEecCCCC
Confidence            46889999999999999999999999   5899988875221   112111110          0012468889999999


Q ss_pred             CCCCCCHHHHHH---H---hcCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHH----HhcCCCCCceeC
Q psy17489        115 EHLGLSEDSEQL---I---KSKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLA----KECVNLKRFCEL  177 (177)
Q Consensus       115 ~~~~~~~~~~~~---~---~~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~v  177 (177)
                      +      +++..   +   +.++|++||+||....       .+.+++.+++|+.++.++++.+    ++. +.++||++
T Consensus        66 ~------~~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~v  138 (280)
T PRK06914         66 Q------NSIHNFQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQ-KSGKIINI  138 (280)
T ss_pred             H------HHHHHHHHHHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEE
Confidence            8      44433   2   2468999999997432       2566778899999999998885    444 56778764

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.48  E-value=1.7e-12  Score=99.91  Aligned_cols=116  Identities=15%  Similarity=0.195  Sum_probs=85.2

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++++++||||+|+||.++++.|++.|   .+|++++|+..      ...+....            ...++.++++|++
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G---~~V~~~~r~~~------~~~~~~~~------------~~~~~~~~~~Dl~   62 (261)
T PRK08265          4 LAGKVAIVTGGATLIGAAVARALVAAG---ARVAIVDIDAD------NGAAVAAS------------LGERARFIATDIT   62 (261)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHH------HHHHHHHH------------hCCeeEEEEecCC
Confidence            568999999999999999999999999   58999988652      11111110            1246788999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC------chHHHHHHHHHhHHHHHHHHHHHHhc--CCCCCcee
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR------FDEALQKAIRANLYATKQMLNLAKEC--VNLKRFCE  176 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~------~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~  176 (177)
                      +.      +++..+++       ++|++|||||...      ..+.++..+++|+.++..+++.+...  .+-.++|+
T Consensus        63 ~~------~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~  134 (261)
T PRK08265         63 DD------AAIERAVATVVARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVN  134 (261)
T ss_pred             CH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEE
Confidence            98      55555443       6899999999642      24677788999999999999877542  12345665

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.47  E-value=1.2e-12  Score=99.55  Aligned_cols=121  Identities=17%  Similarity=0.217  Sum_probs=84.9

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++++++||||+|+||.++++.|++.|   .+|++..++.. ...++..... .            ....++.++.+|++
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g---~~v~~~~~~~~-~~~~~~~~~l-~------------~~~~~~~~~~~D~~   66 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEG---AKVVINYNSSK-EAAENLVNEL-G------------KEGHDVYAVQADVS   66 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcC---CEEEEEcCCcH-HHHHHHHHHH-H------------hcCCeEEEEECCCC
Confidence            467999999999999999999999998   46766554321 1111111111 1            11246888999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCcee
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VNLKRFCE  176 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~  176 (177)
                      +.      +.+..+++       ++|+|||+||....       .+.+++.+++|+.++.++++.+...   .+..+||+
T Consensus        67 ~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~  140 (247)
T PRK12935         67 KV------EDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIIS  140 (247)
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEE
Confidence            98      55655544       48999999997432       2567788999999999999988642   13457776


Q ss_pred             C
Q psy17489        177 L  177 (177)
Q Consensus       177 v  177 (177)
                      +
T Consensus       141 ~  141 (247)
T PRK12935        141 I  141 (247)
T ss_pred             E
Confidence            4

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.47  E-value=1.5e-12  Score=99.69  Aligned_cols=121  Identities=10%  Similarity=0.077  Sum_probs=85.9

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|+... .. +.+.+.+..            ...++.++.+|+.
T Consensus         6 ~~~k~~lVtG~s~gIG~~ia~~l~~~G---~~v~~~~r~~~~-~~-~~~~~~l~~------------~~~~~~~~~~D~~   68 (254)
T PRK06114          6 LDGQVAFVTGAGSGIGQRIAIGLAQAG---ADVALFDLRTDD-GL-AETAEHIEA------------AGRRAIQIAADVT   68 (254)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCcch-HH-HHHHHHHHh------------cCCceEEEEcCCC
Confidence            578999999999999999999999999   588888886521 11 111111110            1246778899999


Q ss_pred             CCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCcee
Q psy17489        114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VNLKRFCE  176 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~  176 (177)
                      ++      +++..++       .++|++|||||....       .+++++.+++|+.++..+++.+...   .+..+||+
T Consensus        69 ~~------~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~  142 (254)
T PRK06114         69 SK------ADLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVN  142 (254)
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEE
Confidence            98      5555544       357999999997532       4567888999999999888876431   13456665


Q ss_pred             C
Q psy17489        177 L  177 (177)
Q Consensus       177 v  177 (177)
                      +
T Consensus       143 i  143 (254)
T PRK06114        143 I  143 (254)
T ss_pred             E
Confidence            3

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.47  E-value=9.6e-13  Score=100.65  Aligned_cols=117  Identities=12%  Similarity=0.072  Sum_probs=85.3

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +++++||||+|+||.++++.|++.|   ++|++++|+...   .+.+.+....            ...++.++.+|+.+.
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G---~~v~~~~r~~~~---~~~~~~~~~~------------~~~~~~~~~~D~~~~   63 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKG---HNVIAGVQIAPQ---VTALRAEAAR------------RGLALRVEKLDLTDA   63 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHHHHh------------cCCcceEEEeeCCCH
Confidence            5789999999999999999999999   688988886421   1222221110            124578899999998


Q ss_pred             CCCCCHHHHHHHhc-CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHH----HhcCCCCCceeC
Q psy17489        116 HLGLSEDSEQLIKS-KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLA----KECVNLKRFCEL  177 (177)
Q Consensus       116 ~~~~~~~~~~~~~~-~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~v  177 (177)
                            +.+..++. ++|+||||||....       .+.++..+++|+.++..+.+.+    .+. +.++||++
T Consensus        64 ------~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~  130 (257)
T PRK09291         64 ------IDRAQAAEWDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVAR-GKGKVVFT  130 (257)
T ss_pred             ------HHHHHHhcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEE
Confidence                  67777776 89999999997531       3456678899999988776654    344 45778764

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.47  E-value=1.6e-12  Score=99.04  Aligned_cols=118  Identities=13%  Similarity=0.170  Sum_probs=86.0

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.+++++|++.|   .+|+.++|+..     +.+.+....            ...++.++.+|++
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G---~~vi~~~r~~~-----~~~~~~~~~------------~~~~~~~~~~D~~   62 (248)
T TIGR01832         3 LEGKVALVTGANTGLGQGIAVGLAEAG---ADIVGAGRSEP-----SETQQQVEA------------LGRRFLSLTADLS   62 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEcCchH-----HHHHHHHHh------------cCCceEEEECCCC
Confidence            578999999999999999999999999   58888887541     122221110            1246889999999


Q ss_pred             CCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CC-CCCce
Q psy17489        114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VN-LKRFC  175 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~-~~~~v  175 (177)
                      +.      +++..++       .++|++||+||....       .+.++..+++|+.++.++++.+.+.   .+ ..++|
T Consensus        63 ~~------~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv  136 (248)
T TIGR01832        63 DI------EAIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKII  136 (248)
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEE
Confidence            98      5555443       368999999997531       3567788999999999999987542   12 35676


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       137 ~~  138 (248)
T TIGR01832       137 NI  138 (248)
T ss_pred             EE
Confidence            63

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.47  E-value=8.6e-13  Score=104.32  Aligned_cols=122  Identities=15%  Similarity=0.156  Sum_probs=85.9

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+++||.++++.|++.|   .+|++.+|+...  .++.+.++..         +.  ...++.++.+|+.
T Consensus        12 l~gk~~lITGas~GIG~~~a~~La~~G---~~Vil~~R~~~~--~~~~~~~l~~---------~~--~~~~v~~~~~Dl~   75 (313)
T PRK05854         12 LSGKRAVVTGASDGLGLGLARRLAAAG---AEVILPVRNRAK--GEAAVAAIRT---------AV--PDAKLSLRALDLS   75 (313)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCHHH--HHHHHHHHHH---------hC--CCCceEEEEecCC
Confidence            578999999999999999999999999   689999887521  1121221111         00  1236888999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc------hHHHHHHHHHhHHHHHHHHHHHHhc--CCCCCceeC
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF------DEALQKAIRANLYATKQMLNLAKEC--VNLKRFCEL  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~------~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~v  177 (177)
                      +.      ++++.+++       ++|++|||||....      .+.++..+.+|+.+...+.+.+...  .+..|+|++
T Consensus        76 d~------~sv~~~~~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~v  148 (313)
T PRK05854         76 SL------ASVAALGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQ  148 (313)
T ss_pred             CH------HHHHHHHHHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEE
Confidence            98      55655443       58999999997532      2456778999999999888876531  123466653

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.47  E-value=1.6e-12  Score=98.12  Aligned_cols=117  Identities=11%  Similarity=0.137  Sum_probs=85.2

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++++++||||+|+||.++++.|++.|   ++|++++|+...  ..+.+.+..               ...+.++.+|+.
T Consensus         5 ~~~k~vlItGatg~iG~~la~~l~~~G---~~v~~~~r~~~~--~~~~~~~~~---------------~~~~~~~~~D~~   64 (239)
T PRK12828          5 LQGKVVAITGGFGGLGRATAAWLAARG---ARVALIGRGAAP--LSQTLPGVP---------------ADALRIGGIDLV   64 (239)
T ss_pred             CCCCEEEEECCCCcHhHHHHHHHHHCC---CeEEEEeCChHh--HHHHHHHHh---------------hcCceEEEeecC
Confidence            568999999999999999999999999   589999986521  112222111               134667889999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCce
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAK----ECVNLKRFC  175 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v  175 (177)
                      +.      +++..+++       ++|+|||+++...       ..+.+.+.+++|+.++.++++.+.    +. +.++||
T Consensus        65 ~~------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv  137 (239)
T PRK12828         65 DP------QAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTAS-GGGRIV  137 (239)
T ss_pred             CH------HHHHHHHHHHHHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhc-CCCEEE
Confidence            87      55555443       6899999998642       134566778999999999988874    33 567887


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       138 ~~  139 (239)
T PRK12828        138 NI  139 (239)
T ss_pred             EE
Confidence            64

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.47  E-value=8.7e-13  Score=100.85  Aligned_cols=112  Identities=14%  Similarity=0.162  Sum_probs=85.1

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|+...        ..               ...++.++++|+.
T Consensus         4 ~~~k~~lItGas~gIG~~la~~l~~~g---~~v~~~~r~~~~--------~~---------------~~~~~~~~~~D~~   57 (252)
T PRK07856          4 LTGRVVLVTGGTRGIGAGIARAFLAAG---ATVVVCGRRAPE--------TV---------------DGRPAEFHAADVR   57 (252)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCChhh--------hh---------------cCCceEEEEccCC
Confidence            568999999999999999999999998   588998886521        00               1246788999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc----CCCCCce
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC----VNLKRFC  175 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v  175 (177)
                      +.      +++..+++       ++|++|||||...       ..+.++..+++|+.++..+++.+...    .+..+||
T Consensus        58 ~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii  131 (252)
T PRK07856         58 DP------DQVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIV  131 (252)
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEE
Confidence            97      55555543       5799999999642       13567788999999999999987641    1335677


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       132 ~i  133 (252)
T PRK07856        132 NI  133 (252)
T ss_pred             EE
Confidence            64

>PRK09135 pteridine reductase; Provisional

Probab=99.47  E-value=6.6e-13  Score=100.86  Aligned_cols=112  Identities=15%  Similarity=0.143  Sum_probs=81.7

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      .++++++||||+|+||++++++|++.|   .+|++++|+...  ..+.+...+..           .....+.++.+|++
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g---~~v~~~~r~~~~--~~~~~~~~~~~-----------~~~~~~~~~~~Dl~   67 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAG---YRVAIHYHRSAA--EADALAAELNA-----------LRPGSAAALQADLL   67 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEcCCCHH--HHHHHHHHHHh-----------hcCCceEEEEcCCC
Confidence            356899999999999999999999998   588988886421  11122111110           01135788999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      +.      +++..+++       ++|+|||+||...       ..++++.++++|+.++.++++++.+
T Consensus        68 ~~------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~  129 (249)
T PRK09135         68 DP------DALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAP  129 (249)
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHH
Confidence            97      56665554       5799999999642       1345777899999999999999864

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.47  E-value=1.5e-12  Score=98.73  Aligned_cols=117  Identities=19%  Similarity=0.274  Sum_probs=84.1

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++++++||||+|+||.++++.|++.|   ..|+..+|+.      +.+.+....            ...++.++.+|+.
T Consensus         4 ~~~~~vlItGa~g~iG~~la~~l~~~g---~~v~~~~~~~------~~~~~~~~~------------~~~~~~~~~~D~~   62 (245)
T PRK12936          4 LSGRKALVTGASGGIGEEIARLLHAQG---AIVGLHGTRV------EKLEALAAE------------LGERVKIFPANLS   62 (245)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEcCCH------HHHHHHHHH------------hCCceEEEEccCC
Confidence            467899999999999999999999998   4777766653      222222111            1136788899999


Q ss_pred             CCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCcee
Q psy17489        114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFCE  176 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~  176 (177)
                      +.      +++..++       .++|++||+||...       ..++++..+++|+.++.++++.+.+.   .+..+||+
T Consensus        63 ~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~  136 (245)
T PRK12936         63 DR------DEVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIIN  136 (245)
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEE
Confidence            87      5555543       46899999999743       13567788999999999998876431   14567776


Q ss_pred             C
Q psy17489        177 L  177 (177)
Q Consensus       177 v  177 (177)
                      +
T Consensus       137 ~  137 (245)
T PRK12936        137 I  137 (245)
T ss_pred             E
Confidence            4

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.47  E-value=1.4e-12  Score=99.69  Aligned_cols=120  Identities=17%  Similarity=0.153  Sum_probs=86.5

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|+..+|+...  ..+...+. .            ....++.++.+|++
T Consensus         7 l~~k~~lItGas~giG~~ia~~L~~~G---~~vvl~~r~~~~--~~~~~~~l-~------------~~~~~~~~~~~Dl~   68 (254)
T PRK08085          7 LAGKNILITGSAQGIGFLLATGLAEYG---AEIIINDITAER--AELAVAKL-R------------QEGIKAHAAPFNVT   68 (254)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcC---CEEEEEcCCHHH--HHHHHHHH-H------------hcCCeEEEEecCCC
Confidence            578999999999999999999999999   588888886421  11111111 1            01245778899999


Q ss_pred             CCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCcee
Q psy17489        114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFCE  176 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~  176 (177)
                      ++      +.+..++       .++|++||+||...       ..++|+..+++|+.++..+++.+.+.   .+..+||+
T Consensus        69 ~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~  142 (254)
T PRK08085         69 HK------QEVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIIN  142 (254)
T ss_pred             CH------HHHHHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEE
Confidence            98      5555544       35899999999642       14677889999999999998877642   14457776


Q ss_pred             C
Q psy17489        177 L  177 (177)
Q Consensus       177 v  177 (177)
                      +
T Consensus       143 i  143 (254)
T PRK08085        143 I  143 (254)
T ss_pred             E
Confidence            4

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.47  E-value=7.9e-13  Score=101.17  Aligned_cols=106  Identities=17%  Similarity=0.183  Sum_probs=82.2

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++++++||||+|+||.++++.|++.|   .+|++++|++...     .... .             . ....++.+|+
T Consensus        11 ~l~~k~~lITGas~gIG~ala~~l~~~G---~~Vi~~~r~~~~~-----~~~~-~-------------~-~~~~~~~~D~   67 (245)
T PRK12367         11 TWQGKRIGITGASGALGKALTKAFRAKG---AKVIGLTHSKINN-----SESN-D-------------E-SPNEWIKWEC   67 (245)
T ss_pred             hhCCCEEEEEcCCcHHHHHHHHHHHHCC---CEEEEEECCchhh-----hhhh-c-------------c-CCCeEEEeeC
Confidence            4678999999999999999999999999   6888888865211     1100 0             0 1125678999


Q ss_pred             CCCCCCCCHHHHHHHhcCCcEEEEcCcccCc----hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        113 ESEHLGLSEDSEQLIKSKVNIIFHCAASLRF----DEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~----~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      ++.      +++...++++|++|||||....    .++++..+++|+.++.++++.+..
T Consensus        68 ~~~------~~~~~~~~~iDilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  120 (245)
T PRK12367         68 GKE------ESLDKQLASLDVLILNHGINPGGRQDPENINKALEINALSSWRLLELFED  120 (245)
T ss_pred             CCH------HHHHHhcCCCCEEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            988      6777888899999999997432    467788899999999999998754

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.47  E-value=2e-12  Score=98.41  Aligned_cols=107  Identities=15%  Similarity=0.235  Sum_probs=80.1

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +.+++++||||+|+||.++++.|++.|   ++|++++|+.      +.+.+....            ...++.++++|++
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g---~~v~~~~r~~------~~~~~~~~~------------~~~~~~~~~~D~~   62 (249)
T PRK06500          4 LQGKTALITGGTSGIGLETARQFLAEG---ARVAITGRDP------ASLEAARAE------------LGESALVIRADAG   62 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEecCCH------HHHHHHHHH------------hCCceEEEEecCC
Confidence            457899999999999999999999999   5888888864      222221111            1246778899999


Q ss_pred             CCCCCCCHHHHHHH-------hcCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        114 SEHLGLSEDSEQLI-------KSKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       114 ~~~~~~~~~~~~~~-------~~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      +.      +++..+       +.++|++||+||....       .+.++..+++|+.++.++++++.+
T Consensus        63 ~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  124 (249)
T PRK06500         63 DV------AAQKALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLP  124 (249)
T ss_pred             CH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            87      344333       3468999999997431       356777899999999999999975

>PRK08589 short chain dehydrogenase; Validated

Probab=99.47  E-value=5e-13  Score=103.51  Aligned_cols=119  Identities=12%  Similarity=0.116  Sum_probs=84.4

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|++   ...+...+...             ...++.++.+|++
T Consensus         4 l~~k~vlItGas~gIG~aia~~l~~~G---~~vi~~~r~~---~~~~~~~~~~~-------------~~~~~~~~~~Dl~   64 (272)
T PRK08589          4 LENKVAVITGASTGIGQASAIALAQEG---AYVLAVDIAE---AVSETVDKIKS-------------NGGKAKAYHVDIS   64 (272)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCcH---HHHHHHHHHHh-------------cCCeEEEEEeecC
Confidence            568999999999999999999999999   6899988862   11122222111             1246788999999


Q ss_pred             CCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc--------hHHHHHHHHHhHHHHHHHHHHHHhc--CCCCCcee
Q psy17489        114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF--------DEALQKAIRANLYATKQMLNLAKEC--VNLKRFCE  176 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~--------~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~  176 (177)
                      +.      +++..++       .++|++|||||....        .+.++..+++|+.++..+.+.+...  .+-.++|+
T Consensus        65 ~~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~  138 (272)
T PRK08589         65 DE------QQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIIN  138 (272)
T ss_pred             CH------HHHHHHHHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEE
Confidence            98      4555443       358999999997421        2457778999999998888776542  01146766


Q ss_pred             C
Q psy17489        177 L  177 (177)
Q Consensus       177 v  177 (177)
                      +
T Consensus       139 i  139 (272)
T PRK08589        139 T  139 (272)
T ss_pred             e
Confidence            4

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.47  E-value=7.6e-13  Score=96.46  Aligned_cols=96  Identities=28%  Similarity=0.427  Sum_probs=81.9

Q ss_pred             EEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCCC
Q psy17489         39 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLG  118 (177)
Q Consensus        39 vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~  118 (177)
                      |+|+||+|++|+.+++.|++.|   ++|+++.|++..      +.+                 ..+++++.+|+.+.   
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~---~~V~~~~R~~~~------~~~-----------------~~~~~~~~~d~~d~---   51 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRG---HEVTALVRSPSK------AED-----------------SPGVEIIQGDLFDP---   51 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTT---SEEEEEESSGGG------HHH-----------------CTTEEEEESCTTCH---
T ss_pred             eEEECCCChHHHHHHHHHHHCC---CEEEEEecCchh------ccc-----------------ccccccceeeehhh---
Confidence            7999999999999999999998   699999998632      111                 26899999999998   


Q ss_pred             CCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        119 LSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       119 ~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                         +.+..+++++|.||++++....          ....+.+++++++++ +++|||++
T Consensus        52 ---~~~~~al~~~d~vi~~~~~~~~----------~~~~~~~~~~a~~~~-~~~~~v~~   96 (183)
T PF13460_consen   52 ---DSVKAALKGADAVIHAAGPPPK----------DVDAAKNIIEAAKKA-GVKRVVYL   96 (183)
T ss_dssp             ---HHHHHHHTTSSEEEECCHSTTT----------HHHHHHHHHHHHHHT-TSSEEEEE
T ss_pred             ---hhhhhhhhhcchhhhhhhhhcc----------ccccccccccccccc-ccccceee
Confidence               8899999999999999986443          167788999999998 89999874

...

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.47  E-value=6.1e-13  Score=101.79  Aligned_cols=110  Identities=14%  Similarity=0.158  Sum_probs=81.8

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   .+|++.+|+...  . +.+.+.+..            ...++.++.+|++
T Consensus         7 ~~~k~vlVtGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~--~-~~~~~~l~~------------~~~~~~~~~~D~~   68 (253)
T PRK05867          7 LHGKRALITGASTGIGKRVALAYVEAG---AQVAIAARHLDA--L-EKLADEIGT------------SGGKVVPVCCDVS   68 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEcCCHHH--H-HHHHHHHHh------------cCCeEEEEEccCC
Confidence            568999999999999999999999999   588888886421  1 122211110            1246778899999


Q ss_pred             CCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      ++      +++..++       .++|++|||||....       .+.++..+++|+.++..+++.+..
T Consensus        69 ~~------~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  130 (253)
T PRK05867         69 QH------QQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAK  130 (253)
T ss_pred             CH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHH
Confidence            98      5555543       378999999997532       356777899999999999988754

>PRK09186 flagellin modification protein A; Provisional

Probab=99.47  E-value=1.6e-12  Score=99.36  Aligned_cols=121  Identities=16%  Similarity=0.241  Sum_probs=83.4

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|+.++|+...  .++...+....         .  ....+.++.+|++
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g---~~v~~~~r~~~~--~~~~~~~l~~~---------~--~~~~~~~~~~Dl~   65 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAG---GIVIAADIDKEA--LNELLESLGKE---------F--KSKKLSLVELDIT   65 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEecChHH--HHHHHHHHHhh---------c--CCCceeEEEecCC
Confidence            568999999999999999999999999   588888886521  11111111000         0  0134667799999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC----------chHHHHHHHHHhHHHHHHHHHHHHh----cCCCC
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR----------FDEALQKAIRANLYATKQMLNLAKE----CVNLK  172 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~----------~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~  172 (177)
                      ++      +++..+++       ++|++||||+...          ..+.+...+++|+.++..+++++.+    . +.+
T Consensus        66 d~------~~~~~~~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~  138 (256)
T PRK09186         66 DQ------ESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQ-GGG  138 (256)
T ss_pred             CH------HHHHHHHHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhc-CCc
Confidence            98      56666554       4899999997531          1245667889999988877776543    3 556


Q ss_pred             CceeC
Q psy17489        173 RFCEL  177 (177)
Q Consensus       173 ~~v~v  177 (177)
                      +||++
T Consensus       139 ~iv~~  143 (256)
T PRK09186        139 NLVNI  143 (256)
T ss_pred             eEEEE
Confidence            88774

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.46  E-value=1.8e-12  Score=99.97  Aligned_cols=121  Identities=12%  Similarity=0.168  Sum_probs=86.0

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++.+|+...  . +.+.+.+..           ....++.++.+|++
T Consensus         6 l~~k~~lItGas~gIG~aia~~l~~~G---~~V~~~~r~~~~--~-~~~~~~~~~-----------~~~~~~~~~~~Dv~   68 (263)
T PRK08339          6 LSGKLAFTTASSKGIGFGVARVLARAG---ADVILLSRNEEN--L-KKAREKIKS-----------ESNVDVSYIVADLT   68 (263)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHHh-----------hcCCceEEEEecCC
Confidence            578999999999999999999999999   588888886421  1 111111110           01246888999999


Q ss_pred             CCCCCCCHHHHHHHhc------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCceeC
Q psy17489        114 SEHLGLSEDSEQLIKS------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFCEL  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~v  177 (177)
                      ++      ++++.+++      ++|++|||||...       ..++|+..+++|+.++..+.+.+...   .+..++|++
T Consensus        69 ~~------~~i~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~i  142 (263)
T PRK08339         69 KR------EDLERTVKELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYS  142 (263)
T ss_pred             CH------HHHHHHHHHHHhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEE
Confidence            98      55555543      6899999999642       14678889999999988887765431   144577764

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.46  E-value=1.9e-12  Score=98.97  Aligned_cols=109  Identities=14%  Similarity=0.148  Sum_probs=79.5

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      .|+++||||+|+||.++++.|++.|   ++|++++|+.... . ....+...            ....++.++.+|++++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g---~~vi~~~r~~~~~-~-~~~~~~~~------------~~~~~~~~~~~D~~~~   64 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAG---FDLAINDRPDDEE-L-AATQQELR------------ALGVEVIFFPADVADL   64 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCC---CEEEEEecCchhH-H-HHHHHHHH------------hcCCceEEEEecCCCH
Confidence            4789999999999999999999998   5888888764211 1 11111111            0124688999999997


Q ss_pred             CCCCCHHHHHHHh-------cCCcEEEEcCcccC---------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        116 HLGLSEDSEQLIK-------SKVNIIFHCAASLR---------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       116 ~~~~~~~~~~~~~-------~~~d~vi~~aa~~~---------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                            +++..++       .++|++||+||...         ..+.++..+++|+.++.++++.+.+
T Consensus        65 ------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  126 (256)
T PRK12745         65 ------SAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAK  126 (256)
T ss_pred             ------HHHHHHHHHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHH
Confidence                  5555443       36899999998642         1356778899999999999888754

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.46  E-value=6.6e-13  Score=101.14  Aligned_cols=120  Identities=18%  Similarity=0.197  Sum_probs=83.8

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEE-EEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYI-MVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      +.+++++||||+|+||.++++.|++.|   ++|++ ..|+...  ..+...+. .            ....++.++.+|+
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g---~~v~~~~~r~~~~--~~~~~~~~-~------------~~~~~~~~~~~D~   63 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEG---YDIAVNYARSRKA--AEETAEEI-E------------ALGRKALAVKANV   63 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEcCCCHHH--HHHHHHHH-H------------hcCCeEEEEEcCC
Confidence            357899999999999999999999998   46665 3554311  11111111 1            0124678899999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCce
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VNLKRFC  175 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v  175 (177)
                      +++      +++..+++       ++|+|||+||....       .+.++..+++|+.++.++++++.+.   .+.++||
T Consensus        64 ~~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv  137 (250)
T PRK08063         64 GDV------EKIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKII  137 (250)
T ss_pred             CCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEE
Confidence            998      55655544       58999999986431       3455667899999999999888653   1456888


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       138 ~~  139 (250)
T PRK08063        138 SL  139 (250)
T ss_pred             EE
Confidence            74

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.46  E-value=1.6e-12  Score=99.71  Aligned_cols=116  Identities=9%  Similarity=0.204  Sum_probs=83.0

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +++++||||+|+||.++++.|++.|   .+|++++|+.      +.+.+....         .... .++.++.+|+++.
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G---~~v~~~~r~~------~~~~~~~~~---------~~~~-~~~~~~~~Dl~~~   62 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQG---ATLGLVARRT------DALQAFAAR---------LPKA-ARVSVYAADVRDA   62 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCC---CEEEEEeCCH------HHHHHHHHh---------cccC-CeeEEEEcCCCCH
Confidence            4799999999999999999999998   5889998864      222222110         0111 2688899999997


Q ss_pred             CCCCCHHHHHHHhc-------CCcEEEEcCcccCc--------hHHHHHHHHHhHHHHHHHHHH----HHhcCCCCCcee
Q psy17489        116 HLGLSEDSEQLIKS-------KVNIIFHCAASLRF--------DEALQKAIRANLYATKQMLNL----AKECVNLKRFCE  176 (177)
Q Consensus       116 ~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~--------~~~~~~~~~~nv~~~~~ll~~----~~~~~~~~~~v~  176 (177)
                            +++.++++       .+|++||+||....        .+.++..+++|+.++.++++.    +++. +..+||+
T Consensus        63 ------~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~-~~~~iv~  135 (257)
T PRK07024         63 ------DALAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAA-RRGTLVG  135 (257)
T ss_pred             ------HHHHHHHHHHHHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhc-CCCEEEE
Confidence                  56655543       47999999997431        245777899999999998774    4444 4566765


Q ss_pred             C
Q psy17489        177 L  177 (177)
Q Consensus       177 v  177 (177)
                      +
T Consensus       136 i  136 (257)
T PRK07024        136 I  136 (257)
T ss_pred             E
Confidence            3

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.46  E-value=2.2e-12  Score=99.96  Aligned_cols=121  Identities=15%  Similarity=0.214  Sum_probs=84.5

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++++++||||+|+||.++++.|++.|   ++|++++|+...  .++...+. .            ....++.++++|+
T Consensus         7 ~~~~k~vlVtGas~giG~~ia~~l~~~G---~~V~~~~r~~~~--~~~~~~~~-~------------~~~~~~~~~~~Dl   68 (278)
T PRK08277          7 SLKGKVAVITGGGGVLGGAMAKELARAG---AKVAILDRNQEK--AEAVVAEI-K------------AAGGEALAVKADV   68 (278)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHH--HHHHHHHH-H------------hcCCeEEEEECCC
Confidence            3578999999999999999999999999   588888886421  11111111 1            0124678899999


Q ss_pred             CCCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc----------------------hHHHHHHHHHhHHHHHHHHH
Q psy17489        113 ESEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF----------------------DEALQKAIRANLYATKQMLN  163 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~----------------------~~~~~~~~~~nv~~~~~ll~  163 (177)
                      .+.      +.+..++       .++|++||+||....                      .++++..+++|+.++..+++
T Consensus        69 ~~~------~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  142 (278)
T PRK08277         69 LDK------ESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQ  142 (278)
T ss_pred             CCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHH
Confidence            997      4554443       378999999995321                      35677889999999987776


Q ss_pred             HHHhc---CCCCCceeC
Q psy17489        164 LAKEC---VNLKRFCEL  177 (177)
Q Consensus       164 ~~~~~---~~~~~~v~v  177 (177)
                      .+.+.   .+..+||++
T Consensus       143 ~~~~~~~~~~~g~ii~i  159 (278)
T PRK08277        143 VFAKDMVGRKGGNIINI  159 (278)
T ss_pred             HHHHHHHhcCCcEEEEE
Confidence            65331   134567764

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.46  E-value=1.2e-12  Score=100.14  Aligned_cols=118  Identities=14%  Similarity=0.131  Sum_probs=85.7

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +.+|+++||||+++||.++++.|++.|   .+|++.+|++.     +...+....            ...++.++.+|++
T Consensus         6 l~~k~~lItGas~gIG~aia~~l~~~G---~~vv~~~~~~~-----~~~~~~~~~------------~~~~~~~~~~Dl~   65 (251)
T PRK12481          6 LNGKVAIITGCNTGLGQGMAIGLAKAG---ADIVGVGVAEA-----PETQAQVEA------------LGRKFHFITADLI   65 (251)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEecCchH-----HHHHHHHHH------------cCCeEEEEEeCCC
Confidence            568999999999999999999999999   57887777431     112211111            1246788999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc----CCCCCce
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC----VNLKRFC  175 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v  175 (177)
                      +.      +++..+++       ++|++|||||...       ..+.|+..+++|+.++..+.+.+.+.    +.-.++|
T Consensus        66 ~~------~~~~~~~~~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii  139 (251)
T PRK12481         66 QQ------KDIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKII  139 (251)
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEE
Confidence            98      56655543       6899999999743       13678889999999999998876542    1134677


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       140 ~i  141 (251)
T PRK12481        140 NI  141 (251)
T ss_pred             Ee
Confidence            64

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.46  E-value=2.1e-12  Score=99.81  Aligned_cols=115  Identities=15%  Similarity=0.122  Sum_probs=83.3

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++++++||||+|+||.++++.|++.|   .+|++.+|++      +.+.+...             ...++.++.+|++
T Consensus         3 ~~~~~ilVtGasggiG~~la~~l~~~G---~~v~~~~r~~------~~~~~~~~-------------~~~~~~~~~~D~~   60 (273)
T PRK07825          3 LRGKVVAITGGARGIGLATARALAALG---ARVAIGDLDE------ALAKETAA-------------ELGLVVGGPLDVT   60 (273)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEECCH------HHHHHHHH-------------HhccceEEEccCC
Confidence            457899999999999999999999999   5788888864      22222111             0124778899999


Q ss_pred             CCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCce
Q psy17489        114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAK----ECVNLKRFC  175 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v  175 (177)
                      ++      +++..++       .++|++|||||....       .+.+...+++|+.++..+.+.+.    +. +..+||
T Consensus        61 ~~------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~g~iv  133 (273)
T PRK07825         61 DP------ASFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPR-GRGHVV  133 (273)
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCEEE
Confidence            97      4544433       468999999997532       34567789999999999877764    33 455677


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       134 ~i  135 (273)
T PRK07825        134 NV  135 (273)
T ss_pred             EE
Confidence            64

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.46  E-value=2.7e-12  Score=98.32  Aligned_cols=114  Identities=17%  Similarity=0.258  Sum_probs=81.4

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|.+.|   ++|+++.++..     +.......               .++.++.+|++
T Consensus         5 l~~k~~lItGas~gIG~~~a~~l~~~G---~~v~~~~~~~~-----~~~~~l~~---------------~~~~~~~~Dl~   61 (255)
T PRK06463          5 FKGKVALITGGTRGIGRAIAEAFLREG---AKVAVLYNSAE-----NEAKELRE---------------KGVFTIKCDVG   61 (255)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCcH-----HHHHHHHh---------------CCCeEEEecCC
Confidence            568999999999999999999999999   57777766432     11111111               24678899999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCce
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAK----ECVNLKRFC  175 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v  175 (177)
                      ++      +++..+++       ++|++|||||...       ..+.++..+++|+.++..+.+.+.    +. +..++|
T Consensus        62 ~~------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-~~g~iv  134 (255)
T PRK06463         62 NR------DQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLS-KNGAIV  134 (255)
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-CCcEEE
Confidence            98      55655543       6899999999742       135677789999999877755543    33 445777


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       135 ~i  136 (255)
T PRK06463        135 NI  136 (255)
T ss_pred             EE
Confidence            64

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.46  E-value=2.7e-12  Score=97.28  Aligned_cols=121  Identities=16%  Similarity=0.210  Sum_probs=86.2

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++++++||||+|+||.++++.|++.|   ++|+++.|+... .. +.+.+....            ...++.++.+|+.
T Consensus         3 ~~~~~vlItG~sg~iG~~l~~~l~~~G---~~v~~~~~~~~~-~~-~~~~~~~~~------------~~~~~~~~~~Dl~   65 (248)
T PRK05557          3 LEGKVALVTGASRGIGRAIAERLAAQG---ANVVINYASSEA-GA-EALVAEIGA------------LGGKALAVQGDVS   65 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCchh-HH-HHHHHHHHh------------cCCceEEEEcCCC
Confidence            467899999999999999999999999   578777776431 11 122211110            1246788999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCcee
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VNLKRFCE  176 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~  176 (177)
                      +.      +++..+++       ++|+|||+||....       .+.++..+++|+.++.++++.+...   .+.++|||
T Consensus        66 ~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~  139 (248)
T PRK05557         66 DA------ESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIIN  139 (248)
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEE
Confidence            98      55555443       68999999997432       3456678899999999998888653   14556777


Q ss_pred             C
Q psy17489        177 L  177 (177)
Q Consensus       177 v  177 (177)
                      +
T Consensus       140 i  140 (248)
T PRK05557        140 I  140 (248)
T ss_pred             E
Confidence            4

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.46  E-value=6e-13  Score=101.34  Aligned_cols=121  Identities=16%  Similarity=0.105  Sum_probs=85.4

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +.+++++||||+|+||.++++.|++.|   .+|++++|+... .. +.+......            ...++.++.+|++
T Consensus         4 ~~~k~vlItGasggiG~~l~~~l~~~G---~~V~~~~r~~~~-~~-~~~~~~l~~------------~~~~~~~~~~D~~   66 (248)
T PRK07806          4 LPGKTALVTGSSRGIGADTAKILAGAG---AHVVVNYRQKAP-RA-NKVVAEIEA------------AGGRASAVGADLT   66 (248)
T ss_pred             CCCcEEEEECCCCcHHHHHHHHHHHCC---CEEEEEeCCchH-hH-HHHHHHHHh------------cCCceEEEEcCCC
Confidence            457899999999999999999999998   588888886421 11 222211110            1246788999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc-CCCCCceeC
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC-VNLKRFCEL  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~v  177 (177)
                      +.      +++..+++       ++|++||+|+.... ..++...+++|+.++.++++.+.+. ....+||++
T Consensus        67 ~~------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~i  133 (248)
T PRK07806         67 DE------ESVAALMDTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFV  133 (248)
T ss_pred             CH------HHHHHHHHHHHHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEE
Confidence            98      56655543       58999999986422 2234567889999999999999864 122477764

>PRK08643 acetoin reductase; Validated

Probab=99.46  E-value=2.1e-12  Score=98.79  Aligned_cols=108  Identities=16%  Similarity=0.155  Sum_probs=79.1

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +|+++||||+|+||.++++.|++.|   .+|++++|+...  . +.+......            ...++.++++|++++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G---~~v~~~~r~~~~--~-~~~~~~~~~------------~~~~~~~~~~Dl~~~   63 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDG---FKVAIVDYNEET--A-QAAADKLSK------------DGGKAIAVKADVSDR   63 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHHh------------cCCeEEEEECCCCCH
Confidence            6899999999999999999999999   589988886521  1 112111110            124678899999998


Q ss_pred             CCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        116 HLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       116 ~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                            +.+..+++       ++|++|||||....       .+.++..+++|+.++..+++.+.+
T Consensus        64 ------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  123 (256)
T PRK08643         64 ------DQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQE  123 (256)
T ss_pred             ------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence                  55555443       68999999987431       356777899999999888777654

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.45  E-value=2e-12  Score=99.55  Aligned_cols=112  Identities=14%  Similarity=0.141  Sum_probs=85.2

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   .+|++.+|++...                        ...++.++.+|+
T Consensus         6 ~l~~k~vlItG~s~gIG~~la~~l~~~G---~~v~~~~~~~~~~------------------------~~~~~~~~~~D~   58 (266)
T PRK06171          6 NLQGKIIIVTGGSSGIGLAIVKELLANG---ANVVNADIHGGDG------------------------QHENYQFVPTDV   58 (266)
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCcccc------------------------ccCceEEEEccC
Confidence            3578999999999999999999999999   6888888865321                        113577899999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC----------------chHHHHHHHHHhHHHHHHHHHHHHhc-
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR----------------FDEALQKAIRANLYATKQMLNLAKEC-  168 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~----------------~~~~~~~~~~~nv~~~~~ll~~~~~~-  168 (177)
                      +++      +++..+++       ++|++||+||...                ..+.|+..+++|+.++..+++++... 
T Consensus        59 ~~~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~  132 (266)
T PRK06171         59 SSA------EEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQM  132 (266)
T ss_pred             CCH------HHHHHHHHHHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHH
Confidence            998      55655443       6899999999632                13567778999999999999887653 


Q ss_pred             --CCCCCceeC
Q psy17489        169 --VNLKRFCEL  177 (177)
Q Consensus       169 --~~~~~~v~v  177 (177)
                        .+..+||++
T Consensus       133 ~~~~~g~iv~i  143 (266)
T PRK06171        133 VKQHDGVIVNM  143 (266)
T ss_pred             HhcCCcEEEEE
Confidence              133456653

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.45  E-value=3.2e-12  Score=99.10  Aligned_cols=116  Identities=10%  Similarity=0.122  Sum_probs=83.7

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCC-ChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGS-SPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      +++++++||||+|+||.++++.|++.|   .+|++++|+.... .....+.....+     +    .....++.++.+|+
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~l~~~~~~-----~----~~~~~~~~~~~~D~   71 (273)
T PRK08278          4 LSGKTLFITGASRGIGLAIALRAARDG---ANIVIAAKTAEPHPKLPGTIHTAAEE-----I----EAAGGQALPLVGDV   71 (273)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEecccccccchhhHHHHHHHH-----H----HhcCCceEEEEecC
Confidence            467899999999999999999999998   5889888875321 111112111110     0    00124688899999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      ++.      +++..+++       ++|++||+||....       .+.++..+++|+.++.++++++..
T Consensus        72 ~~~------~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~  134 (273)
T PRK08278         72 RDE------DQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLP  134 (273)
T ss_pred             CCH------HHHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHH
Confidence            998      56655543       68999999997431       356777899999999999998864

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.45  E-value=6.3e-13  Score=101.82  Aligned_cols=115  Identities=17%  Similarity=0.244  Sum_probs=85.3

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      ..+|+++||||+|++|+++++.|++.|   ++|+++.|+...      ......             ...++.++.+|+.
T Consensus        15 ~~~~~ilItGasG~iG~~l~~~L~~~g---~~V~~~~R~~~~------~~~~~~-------------~~~~~~~~~~Dl~   72 (251)
T PLN00141         15 VKTKTVFVAGATGRTGKRIVEQLLAKG---FAVKAGVRDVDK------AKTSLP-------------QDPSLQIVRADVT   72 (251)
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhCC---CEEEEEecCHHH------HHHhcc-------------cCCceEEEEeeCC
Confidence            356899999999999999999999998   588988887521      111100             1236889999998


Q ss_pred             CCCCCCCHHHHHHHh-cCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        114 SEHLGLSEDSEQLIK-SKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~-~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      +..     +.+...+ .++|+||++++...... ....+++|..++.++++++++. +++||||+
T Consensus        73 d~~-----~~l~~~~~~~~d~vi~~~g~~~~~~-~~~~~~~n~~~~~~ll~a~~~~-~~~~iV~i  130 (251)
T PLN00141         73 EGS-----DKLVEAIGDDSDAVICATGFRRSFD-PFAPWKVDNFGTVNLVEACRKA-GVTRFILV  130 (251)
T ss_pred             CCH-----HHHHHHhhcCCCEEEECCCCCcCCC-CCCceeeehHHHHHHHHHHHHc-CCCEEEEE
Confidence            741     4566666 58999999998642211 1223578899999999999987 88899985

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.45  E-value=2.4e-12  Score=102.58  Aligned_cols=109  Identities=15%  Similarity=0.262  Sum_probs=81.1

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++++++||||+|+||.++++.|.+.|   ++|++++|++..  . +.+.+...            ....++.++.+|++
T Consensus         5 l~~k~vlITGAs~GIG~aia~~la~~G---~~Vvl~~R~~~~--l-~~~~~~~~------------~~g~~~~~~~~Dv~   66 (330)
T PRK06139          5 LHGAVVVITGASSGIGQATAEAFARRG---ARLVLAARDEEA--L-QAVAEECR------------ALGAEVLVVPTDVT   66 (330)
T ss_pred             CCCCEEEEcCCCCHHHHHHHHHHHHCC---CEEEEEECCHHH--H-HHHHHHHH------------hcCCcEEEEEeeCC
Confidence            568999999999999999999999999   588988886521  1 11111111            12346778899999


Q ss_pred             CCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHH
Q psy17489        114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAK  166 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~  166 (177)
                      +.      ++++.++       .++|++|||||....       .+.++..+++|+.++.++.+.+.
T Consensus        67 d~------~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~l  127 (330)
T PRK06139         67 DA------DQVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAAL  127 (330)
T ss_pred             CH------HHHHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHH
Confidence            98      5666554       468999999996432       35677789999999999887764

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.45  E-value=3.4e-12  Score=97.88  Aligned_cols=112  Identities=12%  Similarity=0.161  Sum_probs=80.4

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      ..+|+++||||+|+||.++++.|++.|   .+|+++.++... .. +.+......            ...++.++.+|++
T Consensus         7 ~~~k~vlItGas~giG~~la~~l~~~g---~~v~~~~~~~~~-~~-~~~~~~~~~------------~~~~~~~~~~Dl~   69 (258)
T PRK09134          7 AAPRAALVTGAARRIGRAIALDLAAHG---FDVAVHYNRSRD-EA-EALAAEIRA------------LGRRAVALQADLA   69 (258)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCCHH-HH-HHHHHHHHh------------cCCeEEEEEcCCC
Confidence            357899999999999999999999998   577776664321 11 111111110            1246888999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                      +.      +++..+++       ++|+||||||...       ..+.++..+++|+.++.++++.+...
T Consensus        70 d~------~~~~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  132 (258)
T PRK09134         70 DE------AEVRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARA  132 (258)
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            98      55555443       5899999999643       23567788999999999999987653

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.45  E-value=1.7e-12  Score=98.18  Aligned_cols=119  Identities=19%  Similarity=0.210  Sum_probs=85.0

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +.+++++||||+|++|.++++.|++.|   .+|++++|++..  . ..+.+.+.            .. .++.++.+|+.
T Consensus         4 ~~~~~ilItGatg~iG~~la~~l~~~g---~~V~~~~r~~~~--~-~~~~~~l~------------~~-~~~~~~~~D~~   64 (237)
T PRK07326          4 LKGKVALITGGSKGIGFAIAEALLAEG---YKVAITARDQKE--L-EEAAAELN------------NK-GNVLGLAADVR   64 (237)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCC---CEEEEeeCCHHH--H-HHHHHHHh------------cc-CcEEEEEccCC
Confidence            357899999999999999999999998   589999886521  1 11211111            01 46888999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc--CCCCCceeC
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC--VNLKRFCEL  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~v  177 (177)
                      +.      +++..+++       ++|+|||+++....       .+.+++.+++|+.++.++++++.+.  .+.+++|++
T Consensus        65 ~~------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~  138 (237)
T PRK07326         65 DE------ADVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINI  138 (237)
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEE
Confidence            87      55555443       68999999987532       3456678999999999998887642  134567653

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.45  E-value=3e-12  Score=97.97  Aligned_cols=119  Identities=15%  Similarity=0.178  Sum_probs=86.4

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||+++++.|++.|   ++|++++|++..  . +.+...+..            ...++.++.+|++
T Consensus         9 ~~~k~ilItGas~~IG~~la~~l~~~G---~~v~~~~r~~~~--~-~~~~~~~~~------------~~~~~~~~~~Dl~   70 (256)
T PRK06124          9 LAGQVALVTGSARGLGFEIARALAGAG---AHVLVNGRNAAT--L-EAAVAALRA------------AGGAAEALAFDIA   70 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcC---CeEEEEeCCHHH--H-HHHHHHHHh------------cCCceEEEEccCC
Confidence            578999999999999999999999999   589999987521  1 111111110            1246888999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHh----cCCCCCce
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKE----CVNLKRFC  175 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v  175 (177)
                      ++      +++..+++       ++|++||++|....       .+++++.+++|+.++..+.+.+.+    . +..+||
T Consensus        71 ~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv  143 (256)
T PRK06124         71 DE------EAVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQ-GYGRII  143 (256)
T ss_pred             CH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEE
Confidence            97      55555443       57999999997431       356778899999999999977654    3 456777


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       144 ~~  145 (256)
T PRK06124        144 AI  145 (256)
T ss_pred             EE
Confidence            63

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.45  E-value=2.6e-12  Score=99.22  Aligned_cols=116  Identities=14%  Similarity=0.118  Sum_probs=83.2

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+++||||+|+||.++++.|++.|   .+|++.+|+...  .++.+.....             ...++.++.+|+.+. 
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g---~~V~~~~r~~~~--~~~~~~~l~~-------------~~~~~~~~~~D~~~~-   61 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREG---WRLALADVNEEG--GEETLKLLRE-------------AGGDGFYQRCDVRDY-   61 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCC---CEEEEEeCCHHH--HHHHHHHHHh-------------cCCceEEEEccCCCH-
Confidence            479999999999999999999999   588888886421  1122221111             124678899999987 


Q ss_pred             CCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHH----HhcCCCCCceeC
Q psy17489        117 LGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLA----KECVNLKRFCEL  177 (177)
Q Consensus       117 ~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~v  177 (177)
                           +++..++       .++|++||+||....       .+.++..+++|+.++.++.+.+    ++. +..+||++
T Consensus        62 -----~~~~~~~~~i~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~v  134 (270)
T PRK05650         62 -----SQLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQ-KSGRIVNI  134 (270)
T ss_pred             -----HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC-CCCEEEEE
Confidence                 4555544       368999999997532       3567778999999988877664    444 56677764

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.45  E-value=2.6e-12  Score=98.99  Aligned_cols=119  Identities=13%  Similarity=0.129  Sum_probs=86.1

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +.+|+++||||+|+||.+++++|++.|   ++|++++|+...  . +...+...            ....++.++++|++
T Consensus         8 ~~~k~~lItGa~~~iG~~ia~~l~~~G---~~vv~~~~~~~~--~-~~~~~~~~------------~~~~~~~~~~~Dl~   69 (265)
T PRK07097          8 LKGKIALITGASYGIGFAIAKAYAKAG---ATIVFNDINQEL--V-DKGLAAYR------------ELGIEAHGYVCDVT   69 (265)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCC---CeEEEEeCCHHH--H-HHHHHHHH------------hcCCceEEEEcCCC
Confidence            468999999999999999999999999   578888776421  1 11111111            01246888999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh----cCCCCCce
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE----CVNLKRFC  175 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v  175 (177)
                      +.      +++..+++       ++|++||+||...       ..+.++..+++|+.++..+.+.+..    . +..+||
T Consensus        70 ~~------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv  142 (265)
T PRK07097         70 DE------DGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKK-GHGKII  142 (265)
T ss_pred             CH------HHHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc-CCcEEE
Confidence            98      56665543       5899999999753       2356777899999999988877653    3 456777


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       143 ~i  144 (265)
T PRK07097        143 NI  144 (265)
T ss_pred             EE
Confidence            64

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.44  E-value=2.8e-12  Score=97.36  Aligned_cols=121  Identities=12%  Similarity=0.171  Sum_probs=85.3

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      .++++++||||+|+||+++++.|++.|   ++++...|+... .. +.+.+...            ....++.++.+|+.
T Consensus         3 ~~~~~vlItG~~~~iG~~la~~l~~~g---~~v~~~~~~~~~-~~-~~~~~~~~------------~~~~~~~~~~~Dl~   65 (245)
T PRK12937          3 LSNKVAIVTGASRGIGAAIARRLAADG---FAVAVNYAGSAA-AA-DELVAEIE------------AAGGRAIAVQADVA   65 (245)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEecCCCHH-HH-HHHHHHHH------------hcCCeEEEEECCCC
Confidence            467899999999999999999999999   477766664321 11 11111111            01246888999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc-CCCCCceeC
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC-VNLKRFCEL  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~v  177 (177)
                      +.      +++.++++       ++|++||+||....       .+.++..+++|+.++.++++.+.+. ....+||++
T Consensus        66 ~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~  138 (245)
T PRK12937         66 DA------AAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINL  138 (245)
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEE
Confidence            97      56666554       68999999997431       3567778999999999999888653 122366653

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.44  E-value=3.8e-13  Score=105.39  Aligned_cols=93  Identities=18%  Similarity=0.183  Sum_probs=73.4

Q ss_pred             EEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCCCC
Q psy17489         40 LVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLGL  119 (177)
Q Consensus        40 lVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~  119 (177)
                      |||||+||||++|++.|++.|+   .|++..+.                                   ..+|+.+.    
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~---~v~~~~~~-----------------------------------~~~Dl~~~----   38 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGF---TNLVLRTH-----------------------------------KELDLTRQ----   38 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCC---cEEEeecc-----------------------------------ccCCCCCH----
Confidence            6999999999999999999984   45543221                                   14688887    


Q ss_pred             CHHHHHHHhc--CCcEEEEcCcccCc----hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        120 SEDSEQLIKS--KVNIIFHCAASLRF----DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       120 ~~~~~~~~~~--~~d~vi~~aa~~~~----~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                        +.+..+++  ++|+|||+|+..+.    ......++++|+.++.+++++|+++ ++++|||+
T Consensus        39 --~~l~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~i~~   99 (306)
T PLN02725         39 --ADVEAFFAKEKPTYVILAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRH-GVKKLLFL   99 (306)
T ss_pred             --HHHHHHHhccCCCEEEEeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHc-CCCeEEEe
Confidence              67777766  57999999997542    2344567899999999999999998 89999984

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.44  E-value=3e-12  Score=99.14  Aligned_cols=102  Identities=13%  Similarity=0.207  Sum_probs=77.8

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +|+++||||+|+||.++++.|.+.|   .+|++++|+..      .+.....               .++.++.+|+++.
T Consensus         1 mk~vlItGasggiG~~la~~l~~~G---~~V~~~~r~~~------~~~~~~~---------------~~~~~~~~Dl~~~   56 (274)
T PRK05693          1 MPVVLITGCSSGIGRALADAFKAAG---YEVWATARKAE------DVEALAA---------------AGFTAVQLDVNDG   56 (274)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCC---CEEEEEeCCHH------HHHHHHH---------------CCCeEEEeeCCCH
Confidence            3689999999999999999999998   68999888642      2222111               2467888999987


Q ss_pred             CCCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        116 HLGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       116 ~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                            +.+..++       .++|++||+||....       .+.++..+++|+.++.++++.+..
T Consensus        57 ------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  116 (274)
T PRK05693         57 ------AALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFP  116 (274)
T ss_pred             ------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence                  5555544       368999999996431       356777899999999999988743

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.44  E-value=2.9e-12  Score=97.90  Aligned_cols=121  Identities=19%  Similarity=0.208  Sum_probs=80.7

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++..++.. ....+...+. .            ....++..+.+|+.
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G---~~v~~~~~~~~-~~~~~~~~~~-~------------~~~~~~~~~~~D~~   64 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDG---ALVAIHYGNRK-EEAEETVYEI-Q------------SNGGSAFSIGANLE   64 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCC---CeEEEEcCCCH-HHHHHHHHHH-H------------hcCCceEEEecccC
Confidence            568999999999999999999999999   57776643321 1111111111 1            01235677889998


Q ss_pred             CCCCCCCHHHHHHHh-------------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc-CCCC
Q psy17489        114 SEHLGLSEDSEQLIK-------------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC-VNLK  172 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~-------------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~  172 (177)
                      +.      +++..++             .++|++|||||....       .+.|+..+++|+.++..+++.+.+. .+..
T Consensus        65 ~~------~~~~~~~~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g  138 (252)
T PRK12747         65 SL------HGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNS  138 (252)
T ss_pred             CH------HHHHHHHHHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCC
Confidence            86      2332211             168999999996421       3457888999999999999887653 1224


Q ss_pred             CceeC
Q psy17489        173 RFCEL  177 (177)
Q Consensus       173 ~~v~v  177 (177)
                      +||++
T Consensus       139 ~iv~i  143 (252)
T PRK12747        139 RIINI  143 (252)
T ss_pred             eEEEE
Confidence            67764

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.44  E-value=2.2e-12  Score=98.55  Aligned_cols=119  Identities=12%  Similarity=0.161  Sum_probs=84.5

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++++++||||+|+||.+++++|++.|   .+|++++|++..  . +.+.+.+..            ...++.++.+|++
T Consensus         5 l~~k~ilItGas~~iG~~ia~~l~~~G---~~v~~~~r~~~~--~-~~~~~~~~~------------~~~~~~~~~~D~~   66 (253)
T PRK06172          5 FSGKVALVTGGAAGIGRATALAFAREG---AKVVVADRDAAG--G-EETVALIRE------------AGGEALFVACDVT   66 (253)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcC---CEEEEEeCCHHH--H-HHHHHHHHh------------cCCceEEEEcCCC
Confidence            568999999999999999999999998   589999887532  1 111111110            1246888999999


Q ss_pred             CCCCCCCHHHHHHHh-------cCCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCc
Q psy17489        114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAK----ECVNLKRF  174 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~  174 (177)
                      +.      +++..++       .++|++||+||...        ..+++++.+++|+.++..+++.+.    +. +..++
T Consensus        67 ~~------~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~i  139 (253)
T PRK06172         67 RD------AEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQ-GGGAI  139 (253)
T ss_pred             CH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEE
Confidence            97      4555544       36799999999642        135677789999999988876543    33 44566


Q ss_pred             eeC
Q psy17489        175 CEL  177 (177)
Q Consensus       175 v~v  177 (177)
                      |++
T Consensus       140 i~~  142 (253)
T PRK06172        140 VNT  142 (253)
T ss_pred             EEE
Confidence            653

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.44  E-value=1.5e-12  Score=98.86  Aligned_cols=119  Identities=14%  Similarity=0.046  Sum_probs=84.9

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      ++|+++||||+|++|.++++.|+++|   .+|++++|++..  . +.+.+....            ...++.++.+|+++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G---~~V~~~~r~~~~--~-~~~~~~~~~------------~~~~~~~~~~D~~~   66 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAG---WDLALVARSQDA--L-EALAAELRS------------TGVKAAAYSIDLSN   66 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHHh------------CCCcEEEEEccCCC
Confidence            46899999999999999999999999   589999986521  1 122211110            12468889999999


Q ss_pred             CCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCceeC
Q psy17489        115 EHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VNLKRFCEL  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~v  177 (177)
                      .      +.+..+++       ++|++||+||....       .+.++..+++|+.++.++++.+...   .+..+||++
T Consensus        67 ~------~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~i  140 (241)
T PRK07454         67 P------EAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINV  140 (241)
T ss_pred             H------HHHHHHHHHHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEE
Confidence            8      55555443       58999999997431       2466778999999999988776331   145677764

>PRK12320 hypothetical protein; Provisional

Probab=99.44  E-value=1e-12  Score=112.74  Aligned_cols=100  Identities=16%  Similarity=0.198  Sum_probs=79.6

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+|+||||+||||+++++.|++.|   ++|++++|.+...                        ...+++++.+|+.+. 
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G---~~Vi~ldr~~~~~------------------------~~~~ve~v~~Dl~d~-   52 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAG---HTVSGIAQHPHDA------------------------LDPRVDYVCASLRNP-   52 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCC---CEEEEEeCChhhc------------------------ccCCceEEEccCCCH-
Confidence            479999999999999999999998   5899998854210                        114678999999986 


Q ss_pred             CCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        117 LGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       117 ~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                            .+..++.++|+|||+|+....     ....+|+.++.+++++|++. ++ ++||+
T Consensus        53 ------~l~~al~~~D~VIHLAa~~~~-----~~~~vNv~Gt~nLleAA~~~-Gv-RiV~~  100 (699)
T PRK12320         53 ------VLQELAGEADAVIHLAPVDTS-----APGGVGITGLAHVANAAARA-GA-RLLFV  100 (699)
T ss_pred             ------HHHHHhcCCCEEEEcCccCcc-----chhhHHHHHHHHHHHHHHHc-CC-eEEEE
Confidence                  366777899999999986421     12358999999999999998 66 68774

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.44  E-value=1.2e-12  Score=93.90  Aligned_cols=118  Identities=18%  Similarity=0.298  Sum_probs=86.7

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+++||||++.||..+++.|++.|.  ..|+.++|++..    +...++..+         ......++.++++|+++. 
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~--~~v~~~~r~~~~----~~~~~l~~~---------l~~~~~~~~~~~~D~~~~-   64 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGA--RVVILTSRSEDS----EGAQELIQE---------LKAPGAKITFIECDLSDP-   64 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTT--EEEEEEESSCHH----HHHHHHHHH---------HHHTTSEEEEEESETTSH-
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCc--eEEEEeeecccc----ccccccccc---------cccccccccccccccccc-
Confidence            6899999999999999999999963  578888887111    222222111         011236789999999998 


Q ss_pred             CCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhcCCCCCcee
Q psy17489        117 LGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKECVNLKRFCE  176 (177)
Q Consensus       117 ~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~  176 (177)
                           ++++.+++       .+|++|||||...       ..+.+++.+++|+.+...+.+.+... +-.++|+
T Consensus        65 -----~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~g~iv~  132 (167)
T PF00106_consen   65 -----ESIRALIEEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQ-GGGKIVN  132 (167)
T ss_dssp             -----HHHHHHHHHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHH-TTEEEEE
T ss_pred             -----ccccccccccccccccccccccccccccccccccccchhhhhccccccceeeeeeehheec-cccceEE
Confidence                 56665543       6899999999864       24667789999999999999998874 5556665

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.44  E-value=5.4e-12  Score=96.05  Aligned_cols=119  Identities=15%  Similarity=0.070  Sum_probs=84.1

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +++++||||+|+||.+++++|++.|   .+|++.+|+...  . +.+......          .....++.++.+|+++.
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g---~~v~~~~r~~~~--~-~~~~~~~~~----------~~~~~~~~~~~~D~~~~   65 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKG---RDLALCARRTDR--L-EELKAELLA----------RYPGIKVAVAALDVNDH   65 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcC---CEEEEEeCCHHH--H-HHHHHHHHh----------hCCCceEEEEEcCCCCH
Confidence            6789999999999999999999998   588888887521  1 111111110          00124678899999998


Q ss_pred             CCCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCceeC
Q psy17489        116 HLGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAK----ECVNLKRFCEL  177 (177)
Q Consensus       116 ~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~v  177 (177)
                            +++..++       .++|++||+||....       .+.++..+++|+.++.++++.+.    +. +..+||++
T Consensus        66 ------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~  138 (248)
T PRK08251         66 ------DQVFEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQ-GSGHLVLI  138 (248)
T ss_pred             ------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCeEEEE
Confidence                  4554443       368999999997432       34556788999999999888764    33 55677764

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.44  E-value=4.5e-12  Score=96.42  Aligned_cols=120  Identities=14%  Similarity=0.132  Sum_probs=82.6

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      ++|+++||||+|+||.++++.|++.|   ++|++..++.. ....+.+.+...             ...++..+.+|+.+
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G---~~vv~~~~~~~-~~~~~~~~~~~~-------------~~~~~~~~~~D~~~   64 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDG---FKVVAGCGPNS-PRRVKWLEDQKA-------------LGFDFIASEGNVGD   64 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcC---CEEEEEcCCCh-HHHHHHHHHHHh-------------cCCcEEEEEcCCCC
Confidence            57899999999999999999999999   56766543221 111122222111             12457788999999


Q ss_pred             CCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCceeC
Q psy17489        115 EHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFCEL  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~v  177 (177)
                      .      +++..++       .++|++||+||...       ..++++.++++|+.++..+.+.+.+.   .+..+||++
T Consensus        65 ~------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~i  138 (246)
T PRK12938         65 W------DSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINI  138 (246)
T ss_pred             H------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEE
Confidence            8      5555443       36899999999743       13567788999999988877765431   155677764

>PRK12743 oxidoreductase; Provisional

Probab=99.44  E-value=3.4e-12  Score=97.84  Aligned_cols=119  Identities=10%  Similarity=0.060  Sum_probs=84.0

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +++++||||+|+||.++++.|++.|   ++|+.+.++... .. +.+.+...            ....++.++.+|++++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G---~~V~~~~~~~~~-~~-~~~~~~~~------------~~~~~~~~~~~Dl~~~   64 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQG---FDIGITWHSDEE-GA-KETAEEVR------------SHGVRAEIRQLDLSDL   64 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCChH-HH-HHHHHHHH------------hcCCceEEEEccCCCH
Confidence            5799999999999999999999999   578777654321 11 12211111            0235688999999998


Q ss_pred             CCCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc----CCCCCceeC
Q psy17489        116 HLGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC----VNLKRFCEL  177 (177)
Q Consensus       116 ~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v~v  177 (177)
                            +++..++       .++|++||+||....       .+.++..+++|+.++..+++++...    ++-.+||++
T Consensus        65 ------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~i  138 (256)
T PRK12743         65 ------PEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINI  138 (256)
T ss_pred             ------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence                  5554443       368999999997431       3567788999999999999887653    112467764

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.44  E-value=2.8e-12  Score=98.36  Aligned_cols=108  Identities=12%  Similarity=0.145  Sum_probs=80.9

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++++++||||+|+||.++++.|++.|   ++|++++|++..   .+.+.+...              ..++.++.+|+
T Consensus         8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g---~~V~~~~r~~~~---~~~~~~~~~--------------~~~~~~~~~D~   67 (264)
T PRK12829          8 PLDGLRVLVTGGASGIGRAIAEAFAEAG---ARVHVCDVSEAA---LAATAARLP--------------GAKVTATVADV   67 (264)
T ss_pred             ccCCCEEEEeCCCCcHHHHHHHHHHHCC---CEEEEEeCCHHH---HHHHHHHHh--------------cCceEEEEccC
Confidence            3678999999999999999999999999   589999986421   122221111              12568899999


Q ss_pred             CCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHH
Q psy17489        113 ESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAK  166 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~  166 (177)
                      .++      +.+..++       .++|+|||+||...        ..+.+...+++|+.++..+++.+.
T Consensus        68 ~~~------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~  130 (264)
T PRK12829         68 ADP------AQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAV  130 (264)
T ss_pred             CCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            998      5555544       37899999999751        135677889999999999988764

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.44  E-value=4.3e-12  Score=96.91  Aligned_cols=119  Identities=17%  Similarity=0.157  Sum_probs=84.0

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +.+++++||||+|+||.++++.|++.|   .+|+.++|+...  . +.+.+...+            ...++.++++|+.
T Consensus         6 l~~k~vlItGas~gIG~~l~~~l~~~G---~~Vi~~~r~~~~--~-~~~~~~~~~------------~~~~~~~~~~D~~   67 (252)
T PRK07035          6 LTGKIALVTGASRGIGEAIAKLLAQQG---AHVIVSSRKLDG--C-QAVADAIVA------------AGGKAEALACHIG   67 (252)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHHh------------cCCeEEEEEcCCC
Confidence            567899999999999999999999999   589999886421  1 111111110            1245778899999


Q ss_pred             CCCCCCCHHHHHHHh-------cCCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCc
Q psy17489        114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAK----ECVNLKRF  174 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~  174 (177)
                      +.      +++..++       .++|++||+||...        ..+.++..+++|+.++..+++.+.    +. +..++
T Consensus        68 ~~------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~i  140 (252)
T PRK07035         68 EM------EQIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQ-GGGSI  140 (252)
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCcEE
Confidence            87      4554443       36899999998532        235567789999999998887763    33 44566


Q ss_pred             eeC
Q psy17489        175 CEL  177 (177)
Q Consensus       175 v~v  177 (177)
                      |++
T Consensus       141 v~~  143 (252)
T PRK07035        141 VNV  143 (252)
T ss_pred             EEE
Confidence            653

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.44  E-value=3.9e-12  Score=101.47  Aligned_cols=120  Identities=10%  Similarity=0.138  Sum_probs=84.7

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++++++||||+|+||.++++.|++.|   ++|++++|++..  . +.+.+...            ....++.++.+|+
T Consensus         5 ~l~~k~vlITGas~gIG~~la~~la~~G---~~Vvl~~R~~~~--l-~~~~~~l~------------~~g~~~~~v~~Dv   66 (334)
T PRK07109          5 PIGRQVVVITGASAGVGRATARAFARRG---AKVVLLARGEEG--L-EALAAEIR------------AAGGEALAVVADV   66 (334)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCHHH--H-HHHHHHHH------------HcCCcEEEEEecC
Confidence            3568899999999999999999999999   588888886421  1 11111111            0234688899999


Q ss_pred             CCCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCc
Q psy17489        113 ESEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAK----ECVNLKRF  174 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~  174 (177)
                      +|.      ++++.++       .++|++|||||....       .+.++..+++|+.+..++.+.+.    +. +..+|
T Consensus        67 ~d~------~~v~~~~~~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~-~~g~i  139 (334)
T PRK07109         67 ADA------EAVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPR-DRGAI  139 (334)
T ss_pred             CCH------HHHHHHHHHHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEE
Confidence            998      5565543       368999999996431       35667788999998877666543    33 44567


Q ss_pred             eeC
Q psy17489        175 CEL  177 (177)
Q Consensus       175 v~v  177 (177)
                      |++
T Consensus       140 V~i  142 (334)
T PRK07109        140 IQV  142 (334)
T ss_pred             EEe
Confidence            764

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.43  E-value=2.6e-12  Score=98.44  Aligned_cols=110  Identities=11%  Similarity=0.135  Sum_probs=81.7

Q ss_pred             cccCCCceEEEecCC--cchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEE
Q psy17489         31 DDFYRDGQILVTGGT--GFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVI  108 (177)
Q Consensus        31 ~~~~~~~~vlVtG~~--G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  108 (177)
                      +.++++|+++||||+  ++||..+++.|++.|   .+|++.+|+.   +..+.+.+..               ..++.++
T Consensus         2 ~~~l~~k~~lItGas~~~gIG~a~a~~la~~G---~~Vi~~~r~~---~~~~~~~~~~---------------~~~~~~~   60 (252)
T PRK06079          2 SGILSGKKIVVMGVANKRSIAWGCAQAIKDQG---ATVIYTYQND---RMKKSLQKLV---------------DEEDLLV   60 (252)
T ss_pred             ccccCCCEEEEeCCCCCCchHHHHHHHHHHCC---CEEEEecCch---HHHHHHHhhc---------------cCceeEE
Confidence            345688999999999  799999999999999   5888888752   1222222210               1357789


Q ss_pred             eCCCCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-----------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        109 PSNLESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-----------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       109 ~~D~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-----------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      ++|++++      ++++.++       .++|++|||||...           ..++|+..+++|+.++..+.+.+..
T Consensus        61 ~~Dl~~~------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~  131 (252)
T PRK06079         61 ECDVASD------ESIERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARP  131 (252)
T ss_pred             eCCCCCH------HHHHHHHHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHH
Confidence            9999998      5555443       46899999999642           1356778899999999999888765

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.43  E-value=3e-12  Score=97.35  Aligned_cols=119  Identities=13%  Similarity=0.135  Sum_probs=84.3

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +|+++||||+|+||.++++.|++.|   .+|++++|++..  ..+...+...            ....++.++++|+.++
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G---~~Vi~~~r~~~~--~~~~~~~~~~------------~~~~~~~~~~~Dl~~~   63 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAG---ARLYLAARDVER--LERLADDLRA------------RGAVAVSTHELDILDT   63 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcC---CEEEEEeCCHHH--HHHHHHHHHH------------hcCCeEEEEecCCCCh
Confidence            4789999999999999999999999   589999987521  1111111100            0124788999999998


Q ss_pred             CCCCCHHHHHHHhc----CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCceeC
Q psy17489        116 HLGLSEDSEQLIKS----KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFCEL  177 (177)
Q Consensus       116 ~~~~~~~~~~~~~~----~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~v  177 (177)
                            +++..+++    .+|++||++|...       ..+++.+.+++|+.++.++++.+...   .+.++||++
T Consensus        64 ------~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~  133 (243)
T PRK07102         64 ------ASHAAFLDSLPALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGI  133 (243)
T ss_pred             ------HHHHHHHHHHhhcCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence                  56655544    5799999998643       13445567899999999998887542   145667753

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.43  E-value=3.3e-12  Score=97.84  Aligned_cols=120  Identities=12%  Similarity=0.121  Sum_probs=85.5

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +.+|+++||||+|+||.++++.|.+.|   .+|++++|+...   .+.+.....+            ...++.++.+|++
T Consensus         9 l~~k~vlVtG~s~gIG~~la~~l~~~G---~~vv~~~r~~~~---~~~~~~~l~~------------~~~~~~~~~~D~~   70 (255)
T PRK06113          9 LDGKCAIITGAGAGIGKEIAITFATAG---ASVVVSDINADA---ANHVVDEIQQ------------LGGQAFACRCDIT   70 (255)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCC---CeEEEEeCCHHH---HHHHHHHHHh------------cCCcEEEEEccCC
Confidence            568999999999999999999999999   578888875421   1112111110            1246778899999


Q ss_pred             CCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCceeC
Q psy17489        114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF------DEALQKAIRANLYATKQMLNLAKEC---VNLKRFCEL  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~v  177 (177)
                      +.      +++..++       .++|++||+||....      .+.++..+++|+.++.++++++...   .+..++|++
T Consensus        71 ~~------~~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~i  144 (255)
T PRK06113         71 SE------QELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTI  144 (255)
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEE
Confidence            98      5555543       368999999997431      3567778999999999999998631   133467653

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.43  E-value=2.8e-12  Score=98.06  Aligned_cols=108  Identities=17%  Similarity=0.225  Sum_probs=80.1

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      ||+++||||+|+||.++++.|++.|   ++|++++|+...  . +.+.+....            ...++.++.+|++++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G---~~Vi~~~r~~~~--~-~~~~~~~~~------------~~~~~~~~~~D~~~~   62 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEG---ANVVITGRTKEK--L-EEAKLEIEQ------------FPGQVLTVQMDVRNP   62 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHHh------------cCCcEEEEEecCCCH
Confidence            5799999999999999999999999   589998887421  1 122211110            124688899999987


Q ss_pred             CCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        116 HLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       116 ~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                            +++..++       .++|++||+||...       ..+.|+..+++|+.++.++++++.+
T Consensus        63 ------~~~~~~~~~~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  122 (252)
T PRK07677         63 ------EDVQKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGK  122 (252)
T ss_pred             ------HHHHHHHHHHHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHH
Confidence                  5555543       36899999998532       1356778899999999999998843

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.43  E-value=3.9e-12  Score=95.97  Aligned_cols=107  Identities=18%  Similarity=0.095  Sum_probs=81.5

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      .+|+++||||+|+||.++++.|++.|   ++|++++|+....                          ....++.+|+++
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G---~~v~~~~r~~~~~--------------------------~~~~~~~~D~~~   52 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLG---HQVIGIARSAIDD--------------------------FPGELFACDLAD   52 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCC---CEEEEEeCCcccc--------------------------cCceEEEeeCCC
Confidence            46899999999999999999999999   6899999875321                          012467899999


Q ss_pred             CCCCCCHHHHHHHhc------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCceeC
Q psy17489        115 EHLGLSEDSEQLIKS------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAK----ECVNLKRFCEL  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~v  177 (177)
                      .      +++..+++      ++|++||+||....       .+.++..+++|+.++.++.+.+.    +. +..+||++
T Consensus        53 ~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~  125 (234)
T PRK07577         53 I------EQTAATLAQINEIHPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLR-EQGRIVNI  125 (234)
T ss_pred             H------HHHHHHHHHHHHhCCCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEE
Confidence            7      55555544      58999999997532       34566788999999888877654    34 55677764

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.43  E-value=4.4e-12  Score=97.11  Aligned_cols=114  Identities=17%  Similarity=0.113  Sum_probs=81.7

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++++++||||+|+||.++++.|++.|   ++|++++|+..      ........              -...++.+|+
T Consensus         4 ~~~~~~vlItGasggIG~~~a~~l~~~G---~~v~~~~r~~~------~~~~~~~~--------------~~~~~~~~D~   60 (255)
T PRK06057          4 RLAGRVAVITGGGSGIGLATARRLAAEG---ATVVVGDIDPE------AGKAAADE--------------VGGLFVPTDV   60 (255)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHcC---CEEEEEeCCHH------HHHHHHHH--------------cCCcEEEeeC
Confidence            3678999999999999999999999998   58888888642      12211110              0125788999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc---------hHHHHHHHHHhHHHHHHHHHHHHh----cCCCC
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF---------DEALQKAIRANLYATKQMLNLAKE----CVNLK  172 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~---------~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~  172 (177)
                      ++.      +++..+++       ++|++||+||....         .+.++..+++|+.++..+++.+..    . +..
T Consensus        61 ~~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g  133 (255)
T PRK06057         61 TDE------DAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQ-GKG  133 (255)
T ss_pred             CCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHh-CCc
Confidence            997      56655554       57999999986421         245777899999999888877643    3 334


Q ss_pred             Ccee
Q psy17489        173 RFCE  176 (177)
Q Consensus       173 ~~v~  176 (177)
                      ++|+
T Consensus       134 ~iv~  137 (255)
T PRK06057        134 SIIN  137 (255)
T ss_pred             EEEE
Confidence            5654

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.43  E-value=3.6e-12  Score=96.66  Aligned_cols=117  Identities=14%  Similarity=0.096  Sum_probs=83.8

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      ++++||||+|+||.++++.|.+.|   .+|++++|++. +.. +.+....            .....++.++.+|+.+. 
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g---~~vi~~~r~~~-~~~-~~~~~~~------------~~~~~~~~~~~~D~~~~-   64 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDG---YRVIATYFSGN-DCA-KDWFEEY------------GFTEDQVRLKELDVTDT-   64 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcC---CEEEEEeCCcH-HHH-HHHHHHh------------hccCCeEEEEEcCCCCH-
Confidence            589999999999999999999998   58999988753 111 1111110            01224688999999997 


Q ss_pred             CCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHH----HhcCCCCCceeC
Q psy17489        117 LGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLA----KECVNLKRFCEL  177 (177)
Q Consensus       117 ~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~v  177 (177)
                           +.+..+++       ++|++||++|...       ..+.++..+++|+.++.++.+.+    ++. +..+||++
T Consensus        65 -----~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~i  137 (245)
T PRK12824         65 -----EECAEALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQ-GYGRIINI  137 (245)
T ss_pred             -----HHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-CCeEEEEE
Confidence                 55555443       5899999999643       24567788999999999986654    444 55678764

>PRK08264 short chain dehydrogenase; Validated

Probab=99.43  E-value=4.4e-12  Score=95.98  Aligned_cols=114  Identities=16%  Similarity=0.255  Sum_probs=86.2

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +.+++++||||+|+||+++++.|++.|+  .+|++++|+....      .+                ...++.++.+|+.
T Consensus         4 ~~~~~vlItGgsg~iG~~la~~l~~~G~--~~V~~~~r~~~~~------~~----------------~~~~~~~~~~D~~   59 (238)
T PRK08264          4 IKGKVVLVTGANRGIGRAFVEQLLARGA--AKVYAAARDPESV------TD----------------LGPRVVPLQLDVT   59 (238)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCc--ccEEEEecChhhh------hh----------------cCCceEEEEecCC
Confidence            4678999999999999999999999983  3888888875321      10                1146888999999


Q ss_pred             CCCCCCCHHHHHHHhc---CCcEEEEcCcc-cC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCceeC
Q psy17489        114 SEHLGLSEDSEQLIKS---KVNIIFHCAAS-LR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFCEL  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~---~~d~vi~~aa~-~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~v  177 (177)
                      +.      +++..+++   .+|+|||+||. ..       ..+.+...+++|+.++.++++++.+.   .+..+||++
T Consensus        60 ~~------~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~  131 (238)
T PRK08264         60 DP------ASVAAAAEAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNV  131 (238)
T ss_pred             CH------HHHHHHHHhcCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence            98      67776665   58999999997 21       23567778999999999999986531   145567764

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.43  E-value=4.4e-12  Score=96.69  Aligned_cols=118  Identities=12%  Similarity=0.210  Sum_probs=82.5

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||+++++.|++.|   ++|+...++..     +........            ...++.++.+|+.
T Consensus         3 l~~k~ilItGas~gIG~~la~~l~~~G---~~vv~~~~~~~-----~~~~~~~~~------------~~~~~~~~~~D~~   62 (253)
T PRK08642          3 ISEQTVLVTGGSRGLGAAIARAFAREG---ARVVVNYHQSE-----DAAEALADE------------LGDRAIALQADVT   62 (253)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCC---CeEEEEcCCCH-----HHHHHHHHH------------hCCceEEEEcCCC
Confidence            467899999999999999999999999   47776555321     112211110            1146788999999


Q ss_pred             CCCCCCCHHHHHHHhc-------C-CcEEEEcCcccC-------------chHHHHHHHHHhHHHHHHHHHHHHhc---C
Q psy17489        114 SEHLGLSEDSEQLIKS-------K-VNIIFHCAASLR-------------FDEALQKAIRANLYATKQMLNLAKEC---V  169 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~-~d~vi~~aa~~~-------------~~~~~~~~~~~nv~~~~~ll~~~~~~---~  169 (177)
                      ++      +++..+++       . +|++||+|+...             ..+.++..+++|+.++.++++.+...   .
T Consensus        63 ~~------~~~~~~~~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~  136 (253)
T PRK08642         63 DR------EQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQ  136 (253)
T ss_pred             CH------HHHHHHHHHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhc
Confidence            87      55555443       3 899999998521             13556778999999999999988631   1


Q ss_pred             CCCCceeC
Q psy17489        170 NLKRFCEL  177 (177)
Q Consensus       170 ~~~~~v~v  177 (177)
                      +..++|++
T Consensus       137 ~~g~iv~i  144 (253)
T PRK08642        137 GFGRIINI  144 (253)
T ss_pred             CCeEEEEE
Confidence            44567663

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.42  E-value=3.4e-12  Score=96.89  Aligned_cols=115  Identities=10%  Similarity=0.170  Sum_probs=84.9

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++++++||||+|+||.++++.|++.|   ++|++++|+..      ...+....              .+..++.+|++
T Consensus         7 ~~~~~~lItGa~g~iG~~~a~~l~~~g---~~V~~~~r~~~------~~~~~~~~--------------~~~~~~~~D~~   63 (245)
T PRK07060          7 FSGKSVLVTGASSGIGRACAVALAQRG---ARVVAAARNAA------ALDRLAGE--------------TGCEPLRLDVG   63 (245)
T ss_pred             cCCCEEEEeCCcchHHHHHHHHHHHCC---CEEEEEeCCHH------HHHHHHHH--------------hCCeEEEecCC
Confidence            568899999999999999999999998   58999988642      22221110              13567889999


Q ss_pred             CCCCCCCHHHHHHHhc---CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc----CCCCCceeC
Q psy17489        114 SEHLGLSEDSEQLIKS---KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC----VNLKRFCEL  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~---~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v~v  177 (177)
                      +.      +.+..+++   ++|++||+||....       .+++++.+++|+.++.++++++.+.    +...+||++
T Consensus        64 ~~------~~v~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~  135 (245)
T PRK07060         64 DD------AAIRAALAAAGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNV  135 (245)
T ss_pred             CH------HHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEE
Confidence            87      56666654   58999999997532       3567778899999999999987653    113567764

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.42  E-value=3.1e-12  Score=97.01  Aligned_cols=120  Identities=16%  Similarity=0.237  Sum_probs=85.4

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEE-EeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM-VRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      +++++++||||+|+||.++++.|++.|   ++|+.+ +|+...  . +.+.+....            ...++.++.+|+
T Consensus         3 ~~~~~ilI~Gasg~iG~~la~~l~~~g---~~v~~~~~r~~~~--~-~~~~~~~~~------------~~~~~~~~~~D~   64 (247)
T PRK05565          3 LMGKVAIVTGASGGIGRAIAELLAKEG---AKVVIAYDINEEA--A-QELLEEIKE------------EGGDAIAVKADV   64 (247)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEcCCCHHH--H-HHHHHHHHh------------cCCeEEEEECCC
Confidence            467899999999999999999999998   577777 775421  1 111111110            124688899999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCce
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VNLKRFC  175 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v  175 (177)
                      +++      +++..+++       ++|+|||++|....       .+.++..+++|+.++.++++.+...   .+.++||
T Consensus        65 ~~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v  138 (247)
T PRK05565         65 SSE------EDVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIV  138 (247)
T ss_pred             CCH------HHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence            998      55655543       78999999997531       3556778999999999998877542   1445677


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       139 ~~  140 (247)
T PRK05565        139 NI  140 (247)
T ss_pred             EE
Confidence            64

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.42  E-value=2.2e-12  Score=99.86  Aligned_cols=122  Identities=20%  Similarity=0.270  Sum_probs=85.3

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|+...  ......+...          .. ...++.++.+|+.
T Consensus         5 ~~~k~vlItGasg~IG~~la~~l~~~G---~~V~~~~r~~~~--~~~~~~~l~~----------~~-~~~~~~~~~~Dl~   68 (276)
T PRK05875          5 FQDRTYLVTGGGSGIGKGVAAGLVAAG---AAVMIVGRNPDK--LAAAAEEIEA----------LK-GAGAVRYEPADVT   68 (276)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC---CeEEEEeCCHHH--HHHHHHHHHh----------cc-CCCceEEEEcCCC
Confidence            567999999999999999999999999   589988886421  1111111100          00 1246788999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCce
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFC  175 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v  175 (177)
                      ++      +++..+++       ++|++||+||...        ..+.+...+++|+.++..+++.+.+.   .+..+||
T Consensus        69 ~~------~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv  142 (276)
T PRK05875         69 DE------DQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFV  142 (276)
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence            97      55655544       6899999998532        13456778999999999998876543   1334666


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       143 ~~  144 (276)
T PRK05875        143 GI  144 (276)
T ss_pred             EE
Confidence            53

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.42  E-value=5e-12  Score=97.12  Aligned_cols=117  Identities=14%  Similarity=0.241  Sum_probs=83.0

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +++++||||+|+||.++++.|++.|   ++|++++|+...  . +.+.+.+.            ....++.++.+|+.+.
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g---~~Vi~~~r~~~~--~-~~~~~~l~------------~~~~~~~~~~~Dl~~~   62 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAG---AQLVLAARNETR--L-ASLAQELA------------DHGGEALVVPTDVSDA   62 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHH------------hcCCcEEEEEccCCCH
Confidence            4689999999999999999999998   589999886421  1 11111111            0124688899999998


Q ss_pred             CCCCCHHHHHHHhc-------CCcEEEEcCcccCc--------hHHHHHHHHHhHHHHHHHHHHHHhc--CCCCCcee
Q psy17489        116 HLGLSEDSEQLIKS-------KVNIIFHCAASLRF--------DEALQKAIRANLYATKQMLNLAKEC--VNLKRFCE  176 (177)
Q Consensus       116 ~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~--------~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~  176 (177)
                            +.+..+++       ++|+|||+||....        .+.+.+.+++|+.++.++++.+...  .+..++|+
T Consensus        63 ------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~  134 (263)
T PRK06181         63 ------EACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVV  134 (263)
T ss_pred             ------HHHHHHHHHHHHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEE
Confidence                  56655544       68999999997432        2335667999999999999988532  13356665

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.42  E-value=5.4e-12  Score=102.75  Aligned_cols=107  Identities=16%  Similarity=0.250  Sum_probs=82.9

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|.+.|   .+|++++|++.      ++......            ...++..+.+|++
T Consensus       176 l~gK~VLITGASgGIG~aLA~~La~~G---~~Vi~l~r~~~------~l~~~~~~------------~~~~v~~v~~Dvs  234 (406)
T PRK07424        176 LKGKTVAVTGASGTLGQALLKELHQQG---AKVVALTSNSD------KITLEING------------EDLPVKTLHWQVG  234 (406)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCHH------HHHHHHhh------------cCCCeEEEEeeCC
Confidence            578999999999999999999999999   68888888642      11111110            1124667889999


Q ss_pred             CCCCCCCHHHHHHHhcCCcEEEEcCcccC----chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        114 SEHLGLSEDSEQLIKSKVNIIFHCAASLR----FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~d~vi~~aa~~~----~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      +.      +.+...++++|++|||||...    ..+++++.+++|+.++.++++.+.+
T Consensus       235 d~------~~v~~~l~~IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp  286 (406)
T PRK07424        235 QE------AALAELLEKVDILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFT  286 (406)
T ss_pred             CH------HHHHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            98      778888899999999999743    2346778899999999999998754

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.42  E-value=6.7e-13  Score=104.37  Aligned_cols=106  Identities=20%  Similarity=0.280  Sum_probs=69.0

Q ss_pred             EEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCCC
Q psy17489         39 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLG  118 (177)
Q Consensus        39 vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~  118 (177)
                      |+||||+||||++|++.|++.|   ..++++.|+....   ....                      .+..+|+.|..  
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g---~~~v~~~~~~~~~---~~~~----------------------~~~~~~~~d~~--   51 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKG---ITDILVVDNLKDG---TKFV----------------------NLVDLDIADYM--   51 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCC---CceEEEecCCCcc---hHHH----------------------hhhhhhhhhhh--
Confidence            7999999999999999999998   3555555543211   0000                      11223443321  


Q ss_pred             CCHHH-HHHHh-----cCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        119 LSEDS-EQLIK-----SKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       119 ~~~~~-~~~~~-----~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                       ..+. +..++     .++|+|||+||..+. ..+...+++.|+.++.+++++|++. ++ +|||+
T Consensus        52 -~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~-~~-~~i~~  114 (308)
T PRK11150         52 -DKEDFLAQIMAGDDFGDIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYA  114 (308)
T ss_pred             -hHHHHHHHHhcccccCCccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHc-CC-cEEEE
Confidence             0022 23333     268999999986432 1233457899999999999999998 76 68874

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.42  E-value=5.1e-12  Score=97.24  Aligned_cols=123  Identities=14%  Similarity=0.163  Sum_probs=84.9

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++++++||||+|+||.++++.|++.|   ++|++++|+...  . +...+....        ..  ...++.++.+|+
T Consensus         5 ~l~~k~~lItGas~giG~~ia~~l~~~G---~~V~~~~r~~~~--~-~~~~~~~~~--------~~--~~~~~~~~~~D~   68 (265)
T PRK07062          5 QLEGRVAVVTGGSSGIGLATVELLLEAG---ASVAICGRDEER--L-ASAEARLRE--------KF--PGARLLAARCDV   68 (265)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCC---CeEEEEeCCHHH--H-HHHHHHHHh--------hC--CCceEEEEEecC
Confidence            3578999999999999999999999999   589999986522  1 111111110        00  113677889999


Q ss_pred             CCCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCce
Q psy17489        113 ESEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VNLKRFC  175 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v  175 (177)
                      ++.      +++..++       .++|++|||||....       .+.|...+++|+.+...+++.+...   .+..++|
T Consensus        69 ~~~------~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv  142 (265)
T PRK07062         69 LDE------ADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIV  142 (265)
T ss_pred             CCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEE
Confidence            998      5554443       468999999997431       3467788999999988887765431   1345676


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       143 ~i  144 (265)
T PRK07062        143 CV  144 (265)
T ss_pred             Ee
Confidence            64

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.42  E-value=2e-12  Score=101.66  Aligned_cols=107  Identities=25%  Similarity=0.361  Sum_probs=77.0

Q ss_pred             EEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCCC
Q psy17489         39 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLG  118 (177)
Q Consensus        39 vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~  118 (177)
                      |+||||+||||+++++.|.+.|+  ..|++++|.....    .+.+.                  ....+..|+.+.   
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~--~~v~~~~~~~~~~----~~~~~------------------~~~~~~~d~~~~---   53 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGI--TDILVVDNLRDGH----KFLNL------------------ADLVIADYIDKE---   53 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCC--ceEEEEecCCCch----hhhhh------------------hheeeeccCcch---
Confidence            68999999999999999999984  3677777654321    11110                  012455677765   


Q ss_pred             CCHHHHHHHh----cCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        119 LSEDSEQLIK----SKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       119 ~~~~~~~~~~----~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                         +.++.+.    .++|+|||+|+.... ..++...+++|+.++.+++++|++. ++ +|||+
T Consensus        54 ---~~~~~~~~~~~~~~D~vvh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~-~~v~~  112 (314)
T TIGR02197        54 ---DFLDRLEKGAFGKIEAIFHQGACSDTTETDGEYMMENNYQYSKRLLDWCAEK-GI-PFIYA  112 (314)
T ss_pred             ---hHHHHHHhhccCCCCEEEECccccCccccchHHHHHHHHHHHHHHHHHHHHh-CC-cEEEE
Confidence               4455544    479999999997543 2345667899999999999999998 66 78874

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.42  E-value=5.1e-12  Score=96.07  Aligned_cols=113  Identities=12%  Similarity=0.097  Sum_probs=83.7

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +++++||||+|+||.++++.|++.|   .+|++++|++      +++.+...             ...++.++.+|+++.
T Consensus         1 ~~~vlItGas~giG~~la~~L~~~G---~~V~~~~r~~------~~~~~~~~-------------~~~~~~~~~~D~~~~   58 (240)
T PRK06101          1 MTAVLITGATSGIGKQLALDYAKQG---WQVIACGRNQ------SVLDELHT-------------QSANIFTLAFDVTDH   58 (240)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhCC---CEEEEEECCH------HHHHHHHH-------------hcCCCeEEEeeCCCH
Confidence            3689999999999999999999999   5899998864      22222211             113578899999998


Q ss_pred             CCCCCHHHHHHHhcC----CcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc-CCCCCcee
Q psy17489        116 HLGLSEDSEQLIKSK----VNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC-VNLKRFCE  176 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~----~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~  176 (177)
                            +++..+++.    .|.+||+||...       ..+.++..+++|+.++.++++.+... .+-.++|+
T Consensus        59 ------~~~~~~~~~~~~~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~  125 (240)
T PRK06101         59 ------PGTKAALSQLPFIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVI  125 (240)
T ss_pred             ------HHHHHHHHhcccCCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEE
Confidence                  677777664    589999998532       13456788999999999999998753 12245654

>PRK09242 tropinone reductase; Provisional

Probab=99.41  E-value=7e-12  Score=96.06  Aligned_cols=121  Identities=13%  Similarity=0.246  Sum_probs=86.2

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|.+.|   .+|++++|+...  . +++......        ..  ...++.++.+|++
T Consensus         7 ~~~k~~lItGa~~gIG~~~a~~l~~~G---~~v~~~~r~~~~--~-~~~~~~l~~--------~~--~~~~~~~~~~Dl~   70 (257)
T PRK09242          7 LDGQTALITGASKGIGLAIAREFLGLG---ADVLIVARDADA--L-AQARDELAE--------EF--PEREVHGLAADVS   70 (257)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHcC---CEEEEEeCCHHH--H-HHHHHHHHh--------hC--CCCeEEEEECCCC
Confidence            578999999999999999999999999   588988886421  1 111111110        00  1246788999999


Q ss_pred             CCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh----cCCCCCce
Q psy17489        114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE----CVNLKRFC  175 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v  175 (177)
                      +.      +++..++       .++|++||+||...       ..++++..+++|+.++..+++++.+    . +..+||
T Consensus        71 ~~------~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii  143 (257)
T PRK09242         71 DD------EDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQH-ASSAIV  143 (257)
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCceEE
Confidence            97      4444433       46899999999732       2456778899999999999888753    3 446777


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       144 ~~  145 (257)
T PRK09242        144 NI  145 (257)
T ss_pred             EE
Confidence            64

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.41  E-value=6.3e-12  Score=95.79  Aligned_cols=128  Identities=19%  Similarity=0.172  Sum_probs=84.5

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      ..+++|+++||||+|+||.++++.|++.|   .+|++++|+...  . +.+...+.+           ....++.++.+|
T Consensus         8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G---~~Vi~~~r~~~~--~-~~~~~~l~~-----------~~~~~~~~~~~d   70 (247)
T PRK08945          8 DLLKDRIILVTGAGDGIGREAALTYARHG---ATVILLGRTEEK--L-EAVYDEIEA-----------AGGPQPAIIPLD   70 (247)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCC---CcEEEEeCCHHH--H-HHHHHHHHh-----------cCCCCceEEEec
Confidence            45689999999999999999999999998   588999987521  1 122111110           012356777888


Q ss_pred             CCCCCCC---CCHHHHHHHhcCCcEEEEcCcccCc--------hHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCcee
Q psy17489        112 LESEHLG---LSEDSEQLIKSKVNIIFHCAASLRF--------DEALQKAIRANLYATKQMLNLAK----ECVNLKRFCE  176 (177)
Q Consensus       112 ~~~~~~~---~~~~~~~~~~~~~d~vi~~aa~~~~--------~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~  176 (177)
                      +.+....   ...+.+.+.+.++|+|||+|+....        .+.++..+++|+.++.++++.+.    +. +.++||+
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~-~~~~iv~  149 (247)
T PRK08945         71 LLTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKS-PAASLVF  149 (247)
T ss_pred             ccCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC-CCCEEEE
Confidence            8642110   0001222223468999999986421        35677889999999999988764    34 5667776


Q ss_pred             C
Q psy17489        177 L  177 (177)
Q Consensus       177 v  177 (177)
                      +
T Consensus       150 ~  150 (247)
T PRK08945        150 T  150 (247)
T ss_pred             E
Confidence            3

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.41  E-value=7.4e-12  Score=98.20  Aligned_cols=119  Identities=10%  Similarity=0.124  Sum_probs=85.2

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++++++||||+|+||.++++.|.+.|   ++|++++|+..      .+.+....         .. ...++..+.+|++
T Consensus         7 l~gk~vlItGas~gIG~~ia~~l~~~G---~~V~~~~r~~~------~l~~~~~~---------l~-~~~~~~~~~~Dv~   67 (296)
T PRK05872          7 LAGKVVVVTGAARGIGAELARRLHARG---AKLALVDLEEA------ELAALAAE---------LG-GDDRVLTVVADVT   67 (296)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHH------HHHHHHHH---------hc-CCCcEEEEEecCC
Confidence            578999999999999999999999999   58999888642      22222111         00 1135666779999


Q ss_pred             CCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc--CCCCCceeC
Q psy17489        114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC--VNLKRFCEL  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~v  177 (177)
                      +.      +++..++       .++|++|||||....       .+.++..+++|+.++.++++.+...  .+..+||++
T Consensus        68 d~------~~v~~~~~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~i  141 (296)
T PRK05872         68 DL------AAMQAAAEEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQV  141 (296)
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEE
Confidence            97      5555543       468999999997431       3567788999999999999887542  122456653

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.41  E-value=3.9e-12  Score=97.87  Aligned_cols=107  Identities=14%  Similarity=0.264  Sum_probs=79.8

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++++++||||+|+||.++++.|++.|   ++|++++|+..      .+.++...            ...++.++.+|+.
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G---~~V~~~~r~~~------~~~~l~~~------------~~~~~~~~~~D~~   61 (262)
T TIGR03325         3 LKGEVVLVTGGASGLGRAIVDRFVAEG---ARVAVLDKSAA------GLQELEAA------------HGDAVVGVEGDVR   61 (262)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHH------HHHHHHhh------------cCCceEEEEeccC
Confidence            468999999999999999999999999   58888888642      22222110            1245788899999


Q ss_pred             CCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc-------h-----HHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF-------D-----EALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~-----~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      +.      +++..++       .++|++|||||....       .     +.|+..+++|+.++..+++++.+
T Consensus        62 ~~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~  128 (262)
T TIGR03325        62 SL------DDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALP  128 (262)
T ss_pred             CH------HHHHHHHHHHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHH
Confidence            87      4444433       468999999986321       1     35778899999999999998865

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.41  E-value=5.3e-12  Score=97.09  Aligned_cols=109  Identities=20%  Similarity=0.373  Sum_probs=81.2

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++++++||||+|+||.++++.|+++|   ++|++++|++.      .+.+....     +     ....++.++.+|+.
T Consensus         3 ~~~~~vlItG~s~~iG~~ia~~l~~~G---~~V~~~~r~~~------~~~~~~~~-----~-----~~~~~~~~~~~D~~   63 (263)
T PRK09072          3 LKDKRVLLTGASGGIGQALAEALAAAG---ARLLLVGRNAE------KLEALAAR-----L-----PYPGRHRWVVADLT   63 (263)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEECCHH------HHHHHHHH-----H-----hcCCceEEEEccCC
Confidence            357899999999999999999999999   58999998642      22222111     0     01247889999999


Q ss_pred             CCCCCCCHHHHHHHh------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        114 SEHLGLSEDSEQLIK------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      +.      +++..++      .++|++||+||....       .+.+...+++|+.++.++++.+.+
T Consensus        64 d~------~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~  124 (263)
T PRK09072         64 SE------AGREAVLARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLP  124 (263)
T ss_pred             CH------HHHHHHHHHHHhcCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            98      4555443      468999999997532       345667889999999999988754

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.41  E-value=4.7e-12  Score=96.53  Aligned_cols=111  Identities=10%  Similarity=0.112  Sum_probs=85.0

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||+++++.|++.|   .+|++++|+.        ...                ...++.++++|+.
T Consensus         6 ~~~k~vlItGas~~iG~~la~~l~~~G---~~v~~~~~~~--------~~~----------------~~~~~~~~~~D~~   58 (252)
T PRK08220          6 FSGKTVWVTGAAQGIGYAVALAFVEAG---AKVIGFDQAF--------LTQ----------------EDYPFATFVLDVS   58 (252)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEecch--------hhh----------------cCCceEEEEecCC
Confidence            567999999999999999999999999   5888888864        000                1246788999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCcee
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VNLKRFCE  176 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~  176 (177)
                      +.      +.+..+++       ++|++||+++....       .+.+...+++|+.++..+++.+...   .+..+||+
T Consensus        59 ~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~  132 (252)
T PRK08220         59 DA------AAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVT  132 (252)
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEE
Confidence            98      56666544       48999999997532       3567778999999999999887532   13446765


Q ss_pred             C
Q psy17489        177 L  177 (177)
Q Consensus       177 v  177 (177)
                      +
T Consensus       133 ~  133 (252)
T PRK08220        133 V  133 (252)
T ss_pred             E
Confidence            3

>KOG1429|consensus

Probab=99.41  E-value=2.1e-13  Score=103.83  Aligned_cols=111  Identities=28%  Similarity=0.439  Sum_probs=84.1

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      ..+++|+||||+||||+||+.+|+..|   +.|++++...+...  +.+....              ..++++.+.-|+.
T Consensus        25 ~~~lrI~itGgaGFIgSHLvdkLm~eg---h~VIa~Dn~ftg~k--~n~~~~~--------------~~~~fel~~hdv~   85 (350)
T KOG1429|consen   25 SQNLRILITGGAGFIGSHLVDKLMTEG---HEVIALDNYFTGRK--ENLEHWI--------------GHPNFELIRHDVV   85 (350)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHhcC---CeEEEEecccccch--hhcchhc--------------cCcceeEEEeech
Confidence            456899999999999999999999999   69999887543321  1112111              1356777777776


Q ss_pred             CCCCCCCHHHHHHHhcCCcEEEEcCcccC---chHHHHHHHHHhHHHHHHHHHHHHhcCCCCCcee
Q psy17489        114 SEHLGLSEDSEQLIKSKVNIIFHCAASLR---FDEALQKAIRANLYATKQMLNLAKECVNLKRFCE  176 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~d~vi~~aa~~~---~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~  176 (177)
                      .+           ++..+|.|+|+|++.+   +.......+.+|+.++.+.+.+|++. + +||++
T Consensus        86 ~p-----------l~~evD~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv-~-aR~l~  138 (350)
T KOG1429|consen   86 EP-----------LLKEVDQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRV-G-ARFLL  138 (350)
T ss_pred             hH-----------HHHHhhhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHh-C-ceEEE
Confidence            54           5678899999999865   34555667899999999999999997 5 67765

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.40  E-value=5.9e-12  Score=97.08  Aligned_cols=110  Identities=12%  Similarity=0.157  Sum_probs=80.7

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +.+++++||||+|+||.++++.|++.|   ++|++++|+...  . +...+...            ....++.++.+|++
T Consensus         7 ~~~k~ilItGasggIG~~la~~l~~~G---~~V~~~~r~~~~--~-~~~~~~~~------------~~~~~~~~~~~Dv~   68 (264)
T PRK07576          7 FAGKNVVVVGGTSGINLGIAQAFARAG---ANVAVASRSQEK--V-DAAVAQLQ------------QAGPEGLGVSADVR   68 (264)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHH------------HhCCceEEEECCCC
Confidence            578999999999999999999999999   689999987521  1 11111111            01245678899999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      +.      +++..+++       ++|++||+||...       ..+.+...+++|+.++.++++.+..
T Consensus        69 ~~------~~i~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~  130 (264)
T PRK07576         69 DY------AAVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYP  130 (264)
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            87      55655543       5799999997532       2356777899999999999988764

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.40  E-value=8.2e-12  Score=97.50  Aligned_cols=116  Identities=13%  Similarity=0.121  Sum_probs=81.0

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCC---CChHHHHHHHHhhhhhhcccccCcccCCCeEEEe
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG---SSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIP  109 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  109 (177)
                      .+++|+++||||+++||.++++.|++.|   .+|++.+|+...   ....+.+......     +    .....++.++.
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G---~~vii~~~~~~~~~~~~~~~~~~~~~~~-----l----~~~~~~~~~~~   70 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEG---ARVVVNDIGVGLDGSASGGSAAQAVVDE-----I----VAAGGEAVANG   70 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEeeCCccccccccchhHHHHHHHH-----H----HhcCCceEEEe
Confidence            3678999999999999999999999999   578887765310   0000111111110     0    00124677889


Q ss_pred             CCCCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHH
Q psy17489        110 SNLESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAK  166 (177)
Q Consensus       110 ~D~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~  166 (177)
                      +|+++.      +++..++       .++|++|||||...       ..+.|+..+++|+.++..+.+.+.
T Consensus        71 ~Dv~~~------~~v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  135 (286)
T PRK07791         71 DDIADW------DGAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAA  135 (286)
T ss_pred             CCCCCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHH
Confidence            999998      4554443       46899999999743       136788899999999999988764

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.40  E-value=8.6e-12  Score=95.51  Aligned_cols=108  Identities=14%  Similarity=0.142  Sum_probs=80.7

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +.+|+++||||+|+||.++++.|++.|   ++|+..++...    .+...+...             ...++.++++|++
T Consensus         8 l~~k~~lItG~~~gIG~a~a~~l~~~G---~~vv~~~~~~~----~~~~~~~~~-------------~~~~~~~~~~Dl~   67 (253)
T PRK08993          8 LEGKVAVVTGCDTGLGQGMALGLAEAG---CDIVGINIVEP----TETIEQVTA-------------LGRRFLSLTADLR   67 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEecCcch----HHHHHHHHh-------------cCCeEEEEECCCC
Confidence            678999999999999999999999999   57777766432    122222111             1245778999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      +.      +++..+++       ++|++|||||....       .+.++..+++|+.++.++++.+..
T Consensus        68 ~~------~~~~~~~~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~  129 (253)
T PRK08993         68 KI------DGIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAK  129 (253)
T ss_pred             CH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            87      55555543       68999999997431       356888999999999999888754

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.40  E-value=4.1e-12  Score=100.08  Aligned_cols=114  Identities=23%  Similarity=0.363  Sum_probs=84.1

Q ss_pred             eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCC
Q psy17489         38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHL  117 (177)
Q Consensus        38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~  117 (177)
                      +|+||||+|+||.++++.|++.|   .+|++++|......  ..+...             . ...++.++.+|+.+.  
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g---~~V~~~~~~~~~~~--~~~~~~-------------~-~~~~~~~~~~D~~~~--   59 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESG---HEVVVLDNLSNGSP--EALKRG-------------E-RITRVTFVEGDLRDR--   59 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCC---CeEEEEeCCCccch--hhhhhh-------------c-cccceEEEECCCCCH--
Confidence            58999999999999999999998   47777665332110  111110             0 012577889999998  


Q ss_pred             CCCHHHHHHHhc--CCcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        118 GLSEDSEQLIKS--KVNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       118 ~~~~~~~~~~~~--~~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                          +.+..+++  ++|+|||+||.....   ....+.++.|+.++.+++++|.+. ++++|||+
T Consensus        60 ----~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~  119 (328)
T TIGR01179        60 ----ELLDRLFEEHKIDAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQT-GVKKFIFS  119 (328)
T ss_pred             ----HHHHHHHHhCCCcEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhc-CCCEEEEe
Confidence                67877775  699999999975432   234457899999999999999988 78888874

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PRK12742 oxidoreductase; Provisional

Probab=99.40  E-value=9.5e-12  Score=94.03  Aligned_cols=116  Identities=12%  Similarity=0.205  Sum_probs=81.1

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||+++++.|++.|   .+|++..++..     +...++..+              ..+.++.+|++
T Consensus         4 ~~~k~vlItGasggIG~~~a~~l~~~G---~~v~~~~~~~~-----~~~~~l~~~--------------~~~~~~~~D~~   61 (237)
T PRK12742          4 FTGKKVLVLGGSRGIGAAIVRRFVTDG---ANVRFTYAGSK-----DAAERLAQE--------------TGATAVQTDSA   61 (237)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEecCCCH-----HHHHHHHHH--------------hCCeEEecCCC
Confidence            568999999999999999999999998   57777665431     122221111              13567789998


Q ss_pred             CCCCCCCHHHHHHHh---cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc-CCCCCceeC
Q psy17489        114 SEHLGLSEDSEQLIK---SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC-VNLKRFCEL  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~---~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~v  177 (177)
                      +.      +.+...+   .++|++||+||....       .++++..+++|+.++..+++.+... ....++|++
T Consensus        62 ~~------~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~i  130 (237)
T PRK12742         62 DR------DAVIDVVRKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIII  130 (237)
T ss_pred             CH------HHHHHHHHHhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEE
Confidence            87      4555544   358999999997431       3567889999999999997666542 123466653

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.40  E-value=8.7e-12  Score=89.34  Aligned_cols=119  Identities=15%  Similarity=0.236  Sum_probs=84.6

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHH-HHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEER-VKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      ++++||||+|+||.++++.|.+.|.  ..|++..|++........ +.....             ...++.++.+|+.++
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~--~~v~~~~r~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~D~~~~   65 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGA--RHLVLLSRSGPDAPGAAELLAELEA-------------LGAEVTVVACDVADR   65 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhC--CeEEEEeCCCCCCccHHHHHHHHHh-------------cCCeEEEEECCCCCH
Confidence            4789999999999999999999884  467777876543221111 111111             124677889999987


Q ss_pred             CCCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        116 HLGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       116 ~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                            +.+..++       ..+|.+||+++....       .+.++.++++|+.++.++++.+.+. +.+++|++
T Consensus        66 ------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~ii~~  134 (180)
T smart00822       66 ------AALAAALAAIPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDL-PLDFFVLF  134 (180)
T ss_pred             ------HHHHHHHHHHHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccC-CcceEEEE
Confidence                  4555543       347999999996432       2556778999999999999999776 66777753

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.40  E-value=1.1e-11  Score=97.63  Aligned_cols=112  Identities=14%  Similarity=0.108  Sum_probs=82.2

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      ..+++|+++||||+|+||.++++.|++.|   .+|++.++.... .. +.+.+.+..            ...++.++.+|
T Consensus         8 ~~l~~k~~lVTGas~gIG~~ia~~L~~~G---a~Vv~~~~~~~~-~~-~~~~~~i~~------------~g~~~~~~~~D   70 (306)
T PRK07792          8 TDLSGKVAVVTGAAAGLGRAEALGLARLG---ATVVVNDVASAL-DA-SDVLDEIRA------------AGAKAVAVAGD   70 (306)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEecCCchh-HH-HHHHHHHHh------------cCCeEEEEeCC
Confidence            34678999999999999999999999999   588887775321 11 112111110            12468889999


Q ss_pred             CCCCCCCCCHHHHHHHh------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHH
Q psy17489        112 LESEHLGLSEDSEQLIK------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAK  166 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~  166 (177)
                      +++.      +.+..++      .++|++|||||....       .++++..+++|+.++.++++.+.
T Consensus        71 v~d~------~~~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~  132 (306)
T PRK07792         71 ISQR------ATADELVATAVGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAA  132 (306)
T ss_pred             CCCH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHH
Confidence            9997      4555443      468999999997532       35677889999999999998764

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.39  E-value=6.1e-12  Score=96.55  Aligned_cols=122  Identities=16%  Similarity=0.171  Sum_probs=81.7

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      ..+++++||||+|+||.+++++|++.|.  .+|++.+|++.. ..++...+....            ...++.++++|++
T Consensus         6 ~~~~~vlItGas~giG~~la~~l~~~gg--~~V~~~~r~~~~-~~~~~~~~l~~~------------~~~~v~~~~~D~~   70 (253)
T PRK07904          6 GNPQTILLLGGTSEIGLAICERYLKNAP--ARVVLAALPDDP-RRDAAVAQMKAA------------GASSVEVIDFDAL   70 (253)
T ss_pred             CCCcEEEEEcCCcHHHHHHHHHHHhcCC--CeEEEEeCCcch-hHHHHHHHHHhc------------CCCceEEEEecCC
Confidence            3578999999999999999999999852  589999887632 111112211110            1136889999999


Q ss_pred             CCCCCCCHHHHHHH----h--cCCcEEEEcCcccCch-------HHHHHHHHHhHHHHHHH----HHHHHhcCCCCCcee
Q psy17489        114 SEHLGLSEDSEQLI----K--SKVNIIFHCAASLRFD-------EALQKAIRANLYATKQM----LNLAKECVNLKRFCE  176 (177)
Q Consensus       114 ~~~~~~~~~~~~~~----~--~~~d~vi~~aa~~~~~-------~~~~~~~~~nv~~~~~l----l~~~~~~~~~~~~v~  176 (177)
                      +.      +++..+    .  .++|++||++|.....       ....+.+++|+.++..+    ++.+++. +..+||+
T Consensus        71 ~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~-~~~~iv~  143 (253)
T PRK07904         71 DT------DSHPKVIDAAFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQ-GFGQIIA  143 (253)
T ss_pred             Ch------HHHHHHHHHHHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhc-CCceEEE
Confidence            87      443332    2  3799999999875321       11224689999988875    4555555 5678876


Q ss_pred             C
Q psy17489        177 L  177 (177)
Q Consensus       177 v  177 (177)
                      +
T Consensus       144 i  144 (253)
T PRK07904        144 M  144 (253)
T ss_pred             E
Confidence            4

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.39  E-value=6.1e-12  Score=96.31  Aligned_cols=115  Identities=17%  Similarity=0.182  Sum_probs=82.8

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +++++||||+|+||.+++..|++.|   .+|++++|+..      ........     +      ...++.++.+|+.+.
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g---~~v~~~~r~~~------~~~~~~~~-----~------~~~~~~~~~~D~~~~   61 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAG---DRVLALDIDAA------ALAAFADA-----L------GDARFVPVACDLTDA   61 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCC---CEEEEEeCCHH------HHHHHHHH-----h------cCCceEEEEecCCCH
Confidence            5789999999999999999999998   58999988642      11111110     0      113678899999998


Q ss_pred             CCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHh----cCCCCCceeC
Q psy17489        116 HLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKE----CVNLKRFCEL  177 (177)
Q Consensus       116 ~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~v  177 (177)
                            +.+..+++       ++|++||++|....       .+.+...+.+|+.++.++++.+..    . +..+||++
T Consensus        62 ------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~  134 (257)
T PRK07074         62 ------ASLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKR-SRGAVVNI  134 (257)
T ss_pred             ------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEE
Confidence                  56655543       58999999997532       244556788999999999888743    3 44567663

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.39  E-value=4.2e-12  Score=97.68  Aligned_cols=107  Identities=17%  Similarity=0.267  Sum_probs=79.3

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|++.      .+......            ...++.++++|++
T Consensus         4 ~~~k~vlVtGas~gIG~~ia~~l~~~G---~~V~~~~r~~~------~~~~~~~~------------~~~~~~~~~~D~~   62 (263)
T PRK06200          4 LHGQVALITGGGSGIGRALVERFLAEG---ARVAVLERSAE------KLASLRQR------------FGDHVLVVEGDVT   62 (263)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHH------HHHHHHHH------------hCCcceEEEccCC
Confidence            568999999999999999999999999   58888888642      22222111            1135778999999


Q ss_pred             CCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc--------hH----HHHHHHHHhHHHHHHHHHHHHh
Q psy17489        114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF--------DE----ALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~--------~~----~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      +.      +++..++       .++|++||+||....        .+    .|+..+++|+.++..+++.+..
T Consensus        63 ~~------~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  129 (263)
T PRK06200         63 SY------ADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALP  129 (263)
T ss_pred             CH------HHHHHHHHHHHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHH
Confidence            97      4555443       368999999996421        11    2667789999999999888764

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.39  E-value=1.3e-11  Score=94.64  Aligned_cols=114  Identities=11%  Similarity=0.148  Sum_probs=80.7

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC-CCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK-GSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      .+++|+++||||+|+||.++++.|++.|   .+|+++.++.. .....+.+.+.+..            ...++.++++|
T Consensus         5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G---~~vv~i~~~~~~~~~~~~~~~~~l~~------------~~~~~~~~~~D   69 (257)
T PRK12744          5 SLKGKVVLIAGGAKNLGGLIARDLAAQG---AKAVAIHYNSAASKADAEETVAAVKA------------AGAKAVAFQAD   69 (257)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCC---CcEEEEecCCccchHHHHHHHHHHHH------------hCCcEEEEecC
Confidence            3568999999999999999999999998   46666655432 11111222211110            12467889999


Q ss_pred             CCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        112 LESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      +++.      +++..+++       ++|++||+||...       ..+.++..+++|+.++..+++.+.+
T Consensus        70 ~~~~------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~  133 (257)
T PRK12744         70 LTTA------AAVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGR  133 (257)
T ss_pred             cCCH------HHHHHHHHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHH
Confidence            9998      56665543       6899999999732       1356778899999999999998865

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.38  E-value=1.5e-11  Score=93.13  Aligned_cols=117  Identities=17%  Similarity=0.215  Sum_probs=80.9

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+++||||+|+||.++++.|++.|   ++|+++.|+.. ....+...+. .            ....++.++.+|+.++ 
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G---~~v~~~~r~~~-~~~~~~~~~~-~------------~~~~~~~~~~~D~~~~-   62 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDG---YRVAANCGPNE-ERAEAWLQEQ-G------------ALGFDFRVVEGDVSSF-   62 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCCH-HHHHHHHHHH-H------------hhCCceEEEEecCCCH-
Confidence            579999999999999999999999   57888877321 1111111111 0            0124688999999997 


Q ss_pred             CCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHH----HhcCCCCCceeC
Q psy17489        117 LGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLA----KECVNLKRFCEL  177 (177)
Q Consensus       117 ~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~v  177 (177)
                           +.+..++       ..+|+|||+||...       ..+++...+++|+.++..+++.+    ++. +.++||++
T Consensus        63 -----~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~i  135 (242)
T TIGR01829        63 -----ESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRER-GWGRIINI  135 (242)
T ss_pred             -----HHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEE
Confidence                 4554443       35899999998643       13566778899999988866554    444 55677764

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.38  E-value=1.2e-11  Score=93.44  Aligned_cols=112  Identities=15%  Similarity=0.144  Sum_probs=83.8

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|+....                        ...++.++.+|+.
T Consensus         3 l~~k~~lVtGas~~iG~~ia~~l~~~G---~~v~~~~r~~~~~------------------------~~~~~~~~~~D~~   55 (235)
T PRK06550          3 FMTKTVLITGAASGIGLAQARAFLAQG---AQVYGVDKQDKPD------------------------LSGNFHFLQLDLS   55 (235)
T ss_pred             CCCCEEEEcCCCchHHHHHHHHHHHCC---CEEEEEeCCcccc------------------------cCCcEEEEECChH
Confidence            567899999999999999999999998   5888888864321                        1145778899998


Q ss_pred             CCCCCCCHHHHHHHhcCCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCceeC
Q psy17489        114 SEHLGLSEDSEQLIKSKVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFCEL  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~v  177 (177)
                      ++     .+.+.+.+.++|++||+||...        ..++++..+++|+.++.++++.+...   .+..+||++
T Consensus        56 ~~-----~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~  125 (235)
T PRK06550         56 DD-----LEPLFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINM  125 (235)
T ss_pred             HH-----HHHHHHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEE
Confidence            75     1344444568999999999531        13567788999999999999887542   133467663

>PRK06484 short chain dehydrogenase; Validated

Probab=99.38  E-value=1.3e-11  Score=103.59  Aligned_cols=118  Identities=14%  Similarity=0.196  Sum_probs=86.8

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      ...+|+++||||+|+||.++++.|++.|   ++|++++|+.      +.++++...            ...++..+.+|+
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G---~~V~~~~r~~------~~~~~~~~~------------~~~~~~~~~~D~  324 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAG---DRLLIIDRDA------EGAKKLAEA------------LGDEHLSVQADI  324 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCH------HHHHHHHHH------------hCCceeEEEccC
Confidence            4578999999999999999999999999   5899998864      222222111            113567789999


Q ss_pred             CCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHhc-CCCCCcee
Q psy17489        113 ESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKEC-VNLKRFCE  176 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~  176 (177)
                      +++      +++..++       .++|++|||||...        ..+.|+..+++|+.++.++.+.+... .+..+||+
T Consensus       325 ~~~------~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~  398 (520)
T PRK06484        325 TDE------AAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVN  398 (520)
T ss_pred             CCH------HHHHHHHHHHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEE
Confidence            998      5555544       35899999999742        13567788999999999999987653 12346665


Q ss_pred             C
Q psy17489        177 L  177 (177)
Q Consensus       177 v  177 (177)
                      +
T Consensus       399 i  399 (520)
T PRK06484        399 L  399 (520)
T ss_pred             E
Confidence            3

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.38  E-value=1.1e-11  Score=94.38  Aligned_cols=121  Identities=11%  Similarity=0.114  Sum_probs=82.0

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++++++||||+|+||++++++|++.|   ++|++..|+.. ....+.+.....             ...++.++.+|++
T Consensus         4 ~~~~~vlitGasg~iG~~l~~~l~~~g---~~v~~~~~~~~-~~~~~~~~~~~~-------------~~~~~~~~~~D~~   66 (252)
T PRK06077          4 LKDKVVVVTGSGRGIGRAIAVRLAKEG---SLVVVNAKKRA-EEMNETLKMVKE-------------NGGEGIGVLADVS   66 (252)
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCCh-HHHHHHHHHHHH-------------cCCeeEEEEeccC
Confidence            357899999999999999999999998   46766665432 111111111111             1235678889999


Q ss_pred             CCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc-CCCCCceeC
Q psy17489        114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC-VNLKRFCEL  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~v  177 (177)
                      ++      +++..++       .++|+|||+||...       ..+.++..+++|+.+..++++.+.+. ...++||++
T Consensus        67 ~~------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~  139 (252)
T PRK06077         67 TR------EGCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNI  139 (252)
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEE
Confidence            98      4554443       36899999999632       13345678899999999999988753 122466653

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.38  E-value=1.4e-11  Score=94.76  Aligned_cols=123  Identities=15%  Similarity=0.159  Sum_probs=81.7

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+++||.++++.|++.|   .+|++..|+.. ... +.+.+....           ....++.++.+|+
T Consensus         5 ~l~~k~vlItGas~gIG~~ia~~l~~~G---~~v~~~~~~~~-~~~-~~~~~~~~~-----------~~~~~~~~~~~D~   68 (260)
T PRK08416          5 EMKGKTLVISGGTRGIGKAIVYEFAQSG---VNIAFTYNSNV-EEA-NKIAEDLEQ-----------KYGIKAKAYPLNI   68 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEcCCCH-HHH-HHHHHHHHH-----------hcCCceEEEEcCC
Confidence            4678999999999999999999999999   57777665431 111 111111110           0124688999999


Q ss_pred             CCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------------chHHHHHHHHHhHHHHHHHHHHHHhc---C
Q psy17489        113 ESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------------FDEALQKAIRANLYATKQMLNLAKEC---V  169 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------------~~~~~~~~~~~nv~~~~~ll~~~~~~---~  169 (177)
                      +++      +++..++       .++|++|||||...             ..+.+...+++|+.+...+.+.+...   .
T Consensus        69 ~~~------~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~  142 (260)
T PRK08416         69 LEP------ETYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKV  142 (260)
T ss_pred             CCH------HHHHHHHHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhcc
Confidence            997      5555543       36899999997531             12456678899999888776665432   1


Q ss_pred             CCCCceeC
Q psy17489        170 NLKRFCEL  177 (177)
Q Consensus       170 ~~~~~v~v  177 (177)
                      +..++|++
T Consensus       143 ~~g~iv~i  150 (260)
T PRK08416        143 GGGSIISL  150 (260)
T ss_pred             CCEEEEEE
Confidence            33467663

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.38  E-value=8.1e-12  Score=97.05  Aligned_cols=118  Identities=12%  Similarity=0.124  Sum_probs=82.9

Q ss_pred             CCCceEEEecCC--cchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         34 YRDGQILVTGGT--GFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        34 ~~~~~vlVtG~~--G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      +++|+++||||+  ++||.++++.|++.|   ++|++.+|+..   ..+.+.....+         .   ... .++++|
T Consensus         3 l~~k~~lItGas~~~GIG~aiA~~la~~G---~~Vil~~r~~~---~~~~~~~~~~~---------~---~~~-~~~~~D   63 (274)
T PRK08415          3 MKGKKGLIVGVANNKSIAYGIAKACFEQG---AELAFTYLNEA---LKKRVEPIAQE---------L---GSD-YVYELD   63 (274)
T ss_pred             cCCcEEEEECCCCCCCHHHHHHHHHHHCC---CEEEEEecCHH---HHHHHHHHHHh---------c---CCc-eEEEec
Confidence            468999999997  799999999999999   58888887632   12233322211         0   122 568899


Q ss_pred             CCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-----------chHHHHHHHHHhHHHHHHHHHHHHhc-CCCC
Q psy17489        112 LESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-----------FDEALQKAIRANLYATKQMLNLAKEC-VNLK  172 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-----------~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~  172 (177)
                      +++.      +++..++       .++|++|||||...           ..+.|+..+++|+.++..+.+.+... ..-.
T Consensus        64 v~d~------~~v~~~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g  137 (274)
T PRK08415         64 VSKP------EHFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGA  137 (274)
T ss_pred             CCCH------HHHHHHHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCC
Confidence            9998      5555543       36899999999642           13567889999999999998887652 1123


Q ss_pred             Ccee
Q psy17489        173 RFCE  176 (177)
Q Consensus       173 ~~v~  176 (177)
                      ++|+
T Consensus       138 ~Iv~  141 (274)
T PRK08415        138 SVLT  141 (274)
T ss_pred             cEEE
Confidence            5654

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.38  E-value=2.5e-11  Score=93.29  Aligned_cols=121  Identities=13%  Similarity=0.117  Sum_probs=81.6

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   +.|++..|+... .. ....+....            ...++.++.+|+
T Consensus         4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G---~~vvi~~~~~~~-~~-~~~~~~l~~------------~~~~~~~~~~Dl   66 (261)
T PRK08936          4 DLEGKVVVITGGSTGLGRAMAVRFGKEK---AKVVINYRSDEE-EA-NDVAEEIKK------------AGGEAIAVKGDV   66 (261)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCCHH-HH-HHHHHHHHH------------cCCeEEEEEecC
Confidence            3678999999999999999999999998   577777774321 11 111111110            124577899999


Q ss_pred             CCCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHH----HhcCCCCCc
Q psy17489        113 ESEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLA----KECVNLKRF  174 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~  174 (177)
                      ++.      +++..++       .++|++||+||....       .+.++..+++|+.++..+++.+    .+.+.-.++
T Consensus        67 ~~~------~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~i  140 (261)
T PRK08936         67 TVE------SDVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNI  140 (261)
T ss_pred             CCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEE
Confidence            998      5555543       368999999997432       2567778999999887765544    433122456


Q ss_pred             ee
Q psy17489        175 CE  176 (177)
Q Consensus       175 v~  176 (177)
                      |+
T Consensus       141 v~  142 (261)
T PRK08936        141 IN  142 (261)
T ss_pred             EE
Confidence            65

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.38  E-value=1.2e-11  Score=94.09  Aligned_cols=109  Identities=11%  Similarity=0.090  Sum_probs=76.9

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +++++||||+|+||++++++|++.|   ++|+...++.. . ....+...+..            ...++.++.+|+++.
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G---~~vv~~~~~~~-~-~~~~~~~~l~~------------~~~~~~~~~~Dl~~~   64 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERG---YAVCLNYLRNR-D-AAEAVVQAIRR------------QGGEALAVAADVADE   64 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCC---CeEEEecCCCH-H-HHHHHHHHHHh------------CCCcEEEEEeccCCH
Confidence            4689999999999999999999998   46666554321 1 11111111110            124577899999997


Q ss_pred             CCCCCHHHHHHHhc-------CCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        116 HLGLSEDSEQLIKS-------KVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       116 ~~~~~~~~~~~~~~-------~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                            +++..+++       ++|++||+||...        ..++++..+++|+.++.++++.+.+
T Consensus        65 ------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  125 (248)
T PRK06123         65 ------ADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVK  125 (248)
T ss_pred             ------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence                  55655544       6899999999753        1345667899999999999888754

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.38  E-value=3.7e-12  Score=96.81  Aligned_cols=113  Identities=15%  Similarity=0.192  Sum_probs=81.1

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +++++||||+|+||.++++.|++.|   .+|++++|+....     ...               ....++.++.+|+.+.
T Consensus         1 ~~~vlItGasggiG~~ia~~l~~~G---~~v~~~~r~~~~~-----~~~---------------~~~~~~~~~~~D~~~~   57 (243)
T PRK07023          1 AVRAIVTGHSRGLGAALAEQLLQPG---IAVLGVARSRHPS-----LAA---------------AAGERLAEVELDLSDA   57 (243)
T ss_pred             CceEEEecCCcchHHHHHHHHHhCC---CEEEEEecCcchh-----hhh---------------ccCCeEEEEEeccCCH
Confidence            3589999999999999999999999   5888888875321     110               0124688899999998


Q ss_pred             CCCCCHHHHHHHh-----------cCCcEEEEcCcccCc--------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCC
Q psy17489        116 HLGLSEDSEQLIK-----------SKVNIIFHCAASLRF--------DEALQKAIRANLYATKQMLNLAKEC---VNLKR  173 (177)
Q Consensus       116 ~~~~~~~~~~~~~-----------~~~d~vi~~aa~~~~--------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~  173 (177)
                            +++..++           ..+|++|||||....        .+.++..+++|+.++..+.+.+.+.   .+.++
T Consensus        58 ------~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~  131 (243)
T PRK07023         58 ------AAAAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERR  131 (243)
T ss_pred             ------HHHHHHHHHHHHHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCE
Confidence                  4555522           147899999997532        3556778899999988877666542   14457


Q ss_pred             ceeC
Q psy17489        174 FCEL  177 (177)
Q Consensus       174 ~v~v  177 (177)
                      +|++
T Consensus       132 iv~i  135 (243)
T PRK07023        132 ILHI  135 (243)
T ss_pred             EEEE
Confidence            7764

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.37  E-value=1.4e-11  Score=92.31  Aligned_cols=111  Identities=13%  Similarity=0.222  Sum_probs=79.5

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +|+++||||+|+||.++++.|++. +   +|++++|+..      ...+...             ....+.++.+|+.+.
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~---~V~~~~r~~~------~~~~~~~-------------~~~~~~~~~~D~~~~   59 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-H---TLLLGGRPAE------RLDELAA-------------ELPGATPFPVDLTDP   59 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-C---CEEEEeCCHH------HHHHHHH-------------HhccceEEecCCCCH
Confidence            579999999999999999999987 4   7899998642      1111111             013577899999998


Q ss_pred             CCCCCHHHHHHHhc---CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHH----HhcCCCCCceeC
Q psy17489        116 HLGLSEDSEQLIKS---KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLA----KECVNLKRFCEL  177 (177)
Q Consensus       116 ~~~~~~~~~~~~~~---~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~v  177 (177)
                            +.+..+++   ++|+|||++|....       .+.+.+.+++|+.+...+.+.+    ++.  .+++|++
T Consensus        60 ------~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~v~~  127 (227)
T PRK08219         60 ------EAIAAAVEQLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA--HGHVVFI  127 (227)
T ss_pred             ------HHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCeEEEE
Confidence                  67777775   58999999997432       2456777899999866655543    333  3567663

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.37  E-value=1.3e-11  Score=94.59  Aligned_cols=120  Identities=13%  Similarity=0.105  Sum_probs=83.0

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +++++||||+|+||.++++.|++.|   ++|++++|+...  . +.+.+....    .      ....++.++.+|+++.
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g---~~vi~~~r~~~~--~-~~~~~~~~~----~------~~~~~~~~~~~D~~~~   65 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEG---YRVAVADINSEK--A-ANVAQEINA----E------YGEGMAYGFGADATSE   65 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEECCHHH--H-HHHHHHHHH----h------cCCceeEEEEccCCCH
Confidence            5789999999999999999999998   588888886421  1 111111110    0      0013578899999987


Q ss_pred             CCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CC-CCCceeC
Q psy17489        116 HLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VN-LKRFCEL  177 (177)
Q Consensus       116 ~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~-~~~~v~v  177 (177)
                            +++..++       .++|++||+||...       ..++++..+++|+.++.++++.+.+.   .+ ..++|++
T Consensus        66 ------~~i~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~  139 (259)
T PRK12384         66 ------QSVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQI  139 (259)
T ss_pred             ------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEe
Confidence                  4554443       36899999998643       23567788999999999888876542   13 2466653

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.37  E-value=1.4e-11  Score=94.82  Aligned_cols=121  Identities=17%  Similarity=0.208  Sum_probs=83.8

Q ss_pred             CCCceEEEecCC--cchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         34 YRDGQILVTGGT--GFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        34 ~~~~~vlVtG~~--G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      +.+|+++||||+  ++||.++++.|++.|   ++|++..|+....+.++.+.+...             ...++.++++|
T Consensus         4 l~~k~~lItGas~~~GIG~aia~~la~~G---~~v~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~D   67 (258)
T PRK07370          4 LTGKKALVTGIANNRSIAWGIAQQLHAAG---AELGITYLPDEKGRFEKKVRELTE-------------PLNPSLFLPCD   67 (258)
T ss_pred             cCCcEEEEeCCCCCCchHHHHHHHHHHCC---CEEEEEecCcccchHHHHHHHHHh-------------ccCcceEeecC
Confidence            468999999986  799999999999999   578777665432222233333211             11346678999


Q ss_pred             CCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------c----hHHHHHHHHHhHHHHHHHHHHHHhc-CCCC
Q psy17489        112 LESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------F----DEALQKAIRANLYATKQMLNLAKEC-VNLK  172 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~----~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~  172 (177)
                      +++.      +++..++       .++|++|||||...       .    .+.|+..+++|+.++..+.+.+... ..-.
T Consensus        68 l~d~------~~v~~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g  141 (258)
T PRK07370         68 VQDD------AQIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGG  141 (258)
T ss_pred             cCCH------HHHHHHHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCC
Confidence            9998      5555543       36899999999642       1    3567788999999999998887542 1114


Q ss_pred             Ccee
Q psy17489        173 RFCE  176 (177)
Q Consensus       173 ~~v~  176 (177)
                      ++|+
T Consensus       142 ~Iv~  145 (258)
T PRK07370        142 SIVT  145 (258)
T ss_pred             eEEE
Confidence            5655

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.37  E-value=1.8e-11  Score=89.53  Aligned_cols=117  Identities=13%  Similarity=0.220  Sum_probs=84.0

Q ss_pred             eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC-CCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD-KKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      +++||||.|.||..+++.|.++|.  .+++++.|+ .......+.+.++..             ...++.++.+|++|+ 
T Consensus         2 tylitGG~gglg~~la~~La~~~~--~~~il~~r~~~~~~~~~~~i~~l~~-------------~g~~v~~~~~Dv~d~-   65 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGA--RRLILLGRSGAPSAEAEAAIRELES-------------AGARVEYVQCDVTDP-   65 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT---SEEEEEESSGGGSTTHHHHHHHHHH-------------TT-EEEEEE--TTSH-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCC--CEEEEeccCCCccHHHHHHHHHHHh-------------CCCceeeeccCccCH-
Confidence            689999999999999999999973  799999998 334444445554433             245789999999998 


Q ss_pred             CCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCcee
Q psy17489        117 LGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKECVNLKRFCE  176 (177)
Q Consensus       117 ~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~  176 (177)
                           +++.++++       +++.|||+|+....       .+.+...+...+.++.+|.++.... .++.||+
T Consensus        66 -----~~v~~~~~~~~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~-~l~~~i~  133 (181)
T PF08659_consen   66 -----EAVAAALAQLRQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENR-PLDFFIL  133 (181)
T ss_dssp             -----HHHHHHHHTSHTTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTT-TTSEEEE
T ss_pred             -----HHHHHHHHHHHhccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcC-CCCeEEE
Confidence                 77877764       46899999997531       3456677899999999999999886 7777775

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.37  E-value=1.5e-11  Score=94.10  Aligned_cols=110  Identities=10%  Similarity=0.095  Sum_probs=81.5

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++++++||||+|+||+++++.|.+.|   .+|++++|+...  . +.+...+..            ...++.++.+|+
T Consensus         6 ~~~~k~ilItGasg~IG~~~a~~l~~~G---~~Vi~~~r~~~~--~-~~~~~~l~~------------~~~~~~~~~~D~   67 (258)
T PRK06949          6 NLEGKVALVTGASSGLGARFAQVLAQAG---AKVVLASRRVER--L-KELRAEIEA------------EGGAAHVVSLDV   67 (258)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHHh------------cCCcEEEEEecC
Confidence            3678999999999999999999999998   589999886521  1 112111110            124678899999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHH
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAK  166 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~  166 (177)
                      .+.      +++..+++       ++|++||+|+....       .+.++..+++|+.++.++++.+.
T Consensus        68 ~~~------~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~  129 (258)
T PRK06949         68 TDY------QSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVA  129 (258)
T ss_pred             CCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHH
Confidence            987      55655543       68999999996431       35677789999999999988765

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.37  E-value=1.2e-11  Score=96.00  Aligned_cols=113  Identities=9%  Similarity=0.094  Sum_probs=82.2

Q ss_pred             ccccCCCceEEEecCC--cchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEE
Q psy17489         30 VDDFYRDGQILVTGGT--GFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQV  107 (177)
Q Consensus        30 ~~~~~~~~~vlVtG~~--G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  107 (177)
                      -+..+++|+++||||+  ++||.++++.|++.|   ++|++..|++.   ..+++.++...             ......
T Consensus         4 ~~~~~~~k~~lItGas~~~GIG~aia~~la~~G---~~V~l~~r~~~---~~~~~~~l~~~-------------~~~~~~   64 (272)
T PRK08159          4 ASGLMAGKRGLILGVANNRSIAWGIAKACRAAG---AELAFTYQGDA---LKKRVEPLAAE-------------LGAFVA   64 (272)
T ss_pred             ccccccCCEEEEECCCCCCcHHHHHHHHHHHCC---CEEEEEcCchH---HHHHHHHHHHh-------------cCCceE
Confidence            3456788999999997  899999999999999   58887776421   12333332221             123456


Q ss_pred             EeCCCCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-----------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        108 IPSNLESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-----------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       108 ~~~D~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-----------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      +++|++++      ++++.++       .++|++|||||...           ..+.|+..+++|+.++..+++.+..
T Consensus        65 ~~~Dl~~~------~~v~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~  136 (272)
T PRK08159         65 GHCDVTDE------ASIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEK  136 (272)
T ss_pred             EecCCCCH------HHHHHHHHHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHH
Confidence            88999998      5555543       36899999999742           1356788899999999999988765

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.36  E-value=4.9e-12  Score=98.30  Aligned_cols=99  Identities=19%  Similarity=0.256  Sum_probs=70.1

Q ss_pred             EEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCCC
Q psy17489         39 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLG  118 (177)
Q Consensus        39 vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~  118 (177)
                      |+||||+||||+++++.|++.|   .+|++++|+.......                       ....+  .|+..    
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~-----------------------~~~~~--~~~~~----   48 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDG---HEVTILTRSPPAGANT-----------------------KWEGY--KPWAP----   48 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcC---CEEEEEeCCCCCCCcc-----------------------cceee--ecccc----
Confidence            6899999999999999999998   5899999976432100                       00011  11111    


Q ss_pred             CCHHHHHHHhcCCcEEEEcCcccCc-----hHHHHHHHHHhHHHHHHHHHHHHhcCCCCC
Q psy17489        119 LSEDSEQLIKSKVNIIFHCAASLRF-----DEALQKAIRANLYATKQMLNLAKECVNLKR  173 (177)
Q Consensus       119 ~~~~~~~~~~~~~d~vi~~aa~~~~-----~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~  173 (177)
                         ......+.++|+|||+||....     ......++++|+.++.+++++|++. ++++
T Consensus        49 ---~~~~~~~~~~D~Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~  104 (292)
T TIGR01777        49 ---LAESEALEGADAVINLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAA-EQKP  104 (292)
T ss_pred             ---cchhhhcCCCCEEEECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhc-CCCc
Confidence               1234456789999999997432     1234567899999999999999998 6543

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.36  E-value=5.3e-12  Score=98.17  Aligned_cols=93  Identities=19%  Similarity=0.297  Sum_probs=74.4

Q ss_pred             eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCC
Q psy17489         38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHL  117 (177)
Q Consensus        38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~  117 (177)
                      +|+||||+||||+++++.|++.|   ++|++++|.                                    .+|+.+.  
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g---~~v~~~~r~------------------------------------~~d~~~~--   39 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEG---RVVVALTSS------------------------------------QLDLTDP--   39 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcC---CEEEEeCCc------------------------------------ccCCCCH--
Confidence            48999999999999999999998   578887763                                    2466666  


Q ss_pred             CCCHHHHHHHhcC--CcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        118 GLSEDSEQLIKSK--VNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       118 ~~~~~~~~~~~~~--~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                          +.+..++++  +|+|||+|+.....   .....++++|+.++.+++++|++. +. +|||+
T Consensus        40 ----~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~v~~   98 (287)
T TIGR01214        40 ----EALERLLRAIRPDAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARH-GA-RLVHI   98 (287)
T ss_pred             ----HHHHHHHHhCCCCEEEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEE
Confidence                677877775  49999999975432   234567899999999999999987 54 78874

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.36  E-value=3.5e-11  Score=92.16  Aligned_cols=123  Identities=17%  Similarity=0.153  Sum_probs=84.1

Q ss_pred             CCCceEEEecCCc--chHHHHHHHHHhhCCCcCeEEEEEeCCCCCC------hHHH--HHHHHhhhhhhcccccCcccCC
Q psy17489         34 YRDGQILVTGGTG--FMGKLLIDKLLRSFPDIGAIYIMVRDKKGSS------PEER--VKNMLNSVIFDRLNKEVPDFRS  103 (177)
Q Consensus        34 ~~~~~vlVtG~~G--~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~------~~~~--~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      +++++++||||+|  +||.++++.|++.|   ++|++++|++....      ..+.  +.....            ....
T Consensus         3 l~~k~vlItGas~~~giG~~la~~l~~~G---~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~   67 (256)
T PRK12748          3 LMKKIALVTGASRLNGIGAAVCRRLAAKG---IDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIE------------SYGV   67 (256)
T ss_pred             CCCcEEEEeCCCCCCCHHHHHHHHHHHcC---CcEEEEcCCccccccccccchhhHHHHHHHHH------------hcCC
Confidence            4678999999995  79999999999999   58888888722110      0011  111111            1124


Q ss_pred             CeEEEeCCCCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc-
Q psy17489        104 KIQVIPSNLESEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC-  168 (177)
Q Consensus       104 ~v~~~~~D~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~-  168 (177)
                      ++.++.+|+++.      +++..++       .++|+|||+||....       .+.++..+++|+.++..+++.+... 
T Consensus        68 ~~~~~~~D~~~~------~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~  141 (256)
T PRK12748         68 RCEHMEIDLSQP------YAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQY  141 (256)
T ss_pred             eEEEEECCCCCH------HHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence            688999999997      4554443       358999999987432       2456778999999999999887542 


Q ss_pred             --CCCCCceeC
Q psy17489        169 --VNLKRFCEL  177 (177)
Q Consensus       169 --~~~~~~v~v  177 (177)
                        ....+||++
T Consensus       142 ~~~~~~~iv~~  152 (256)
T PRK12748        142 DGKAGGRIINL  152 (256)
T ss_pred             hhcCCeEEEEE
Confidence              123466653

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.36  E-value=1.8e-11  Score=94.11  Aligned_cols=109  Identities=12%  Similarity=0.087  Sum_probs=79.9

Q ss_pred             CCCceEEEecCC--cchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         34 YRDGQILVTGGT--GFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        34 ~~~~~vlVtG~~--G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      +++|+++||||+  ++||.++++.|++.|   .+|++.+|+...   .+.+.+...+             .....++++|
T Consensus         8 ~~~k~~lItGas~g~GIG~a~a~~la~~G---~~v~l~~r~~~~---~~~~~~~~~~-------------~~~~~~~~~D   68 (258)
T PRK07533          8 LAGKRGLVVGIANEQSIAWGCARAFRALG---AELAVTYLNDKA---RPYVEPLAEE-------------LDAPIFLPLD   68 (258)
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcC---CEEEEEeCChhh---HHHHHHHHHh-------------hccceEEecC
Confidence            578999999998  599999999999999   588888886421   1222222111             1234578899


Q ss_pred             CCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-----------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        112 LESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-----------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-----------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      +++.      ++++.++       .++|++|||||...           ..++|+..+++|+.++..+++.+..
T Consensus        69 ~~~~------~~v~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p  136 (258)
T PRK07533         69 VREP------GQLEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEP  136 (258)
T ss_pred             cCCH------HHHHHHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            9998      5555543       36899999999642           1356788999999999999998754

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.36  E-value=1.7e-11  Score=95.19  Aligned_cols=106  Identities=14%  Similarity=0.201  Sum_probs=79.0

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +|+++|||+ |+||.++++.|. .|   ++|++++|+...  . +.+.+....            ...++.++.+|+++.
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G---~~Vv~~~r~~~~--~-~~~~~~l~~------------~~~~~~~~~~Dv~d~   61 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AG---KKVLLADYNEEN--L-EAAAKTLRE------------AGFDVSTQEVDVSSR   61 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CC---CEEEEEeCCHHH--H-HHHHHHHHh------------cCCeEEEEEeecCCH
Confidence            578999998 799999999996 67   689999886421  1 111111110            124678899999998


Q ss_pred             CCCCCHHHHHHHh------cCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        116 HLGLSEDSEQLIK------SKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       116 ~~~~~~~~~~~~~------~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                            +++..++      .++|++|||||......+++..+++|+.++.++++.+..
T Consensus        62 ------~~i~~~~~~~~~~g~id~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~  113 (275)
T PRK06940         62 ------ESVKALAATAQTLGPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGK  113 (275)
T ss_pred             ------HHHHHHHHHHHhcCCCCEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHH
Confidence                  5555554      368999999998765677889999999999999998765

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.36  E-value=4.3e-11  Score=94.39  Aligned_cols=114  Identities=11%  Similarity=0.114  Sum_probs=80.3

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCC-------CChHHHHHHHHhhhhhhcccccCcccCCCe
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG-------SSPEERVKNMLNSVIFDRLNKEVPDFRSKI  105 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  105 (177)
                      .+++|+++||||+++||.++++.|++.|   .+|++.+|+...       ....+.+.+.+.            ....++
T Consensus         5 ~l~~k~~lITGgs~GIG~aia~~la~~G---~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~------------~~~~~~   69 (305)
T PRK08303          5 PLRGKVALVAGATRGAGRGIAVELGAAG---ATVYVTGRSTRARRSEYDRPETIEETAELVT------------AAGGRG   69 (305)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEecccccccccccccchHHHHHHHHH------------hcCCce
Confidence            3678999999999999999999999999   688888887421       111111221111            012457


Q ss_pred             EEEeCCCCCCCCCCCHHHHHHHh-------cCCcEEEEcC-ccc------C-c----hHHHHHHHHHhHHHHHHHHHHHH
Q psy17489        106 QVIPSNLESEHLGLSEDSEQLIK-------SKVNIIFHCA-ASL------R-F----DEALQKAIRANLYATKQMLNLAK  166 (177)
Q Consensus       106 ~~~~~D~~~~~~~~~~~~~~~~~-------~~~d~vi~~a-a~~------~-~----~~~~~~~~~~nv~~~~~ll~~~~  166 (177)
                      .++++|++++      ++++.++       .++|++|||| |..      . .    .+.+.+.+++|+.+...+.+++.
T Consensus        70 ~~~~~Dv~~~------~~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l  143 (305)
T PRK08303         70 IAVQVDHLVP------EQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFAL  143 (305)
T ss_pred             EEEEcCCCCH------HHHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHH
Confidence            7899999998      5555543       3689999999 631      1 1    24567788999999998888765


Q ss_pred             h
Q psy17489        167 E  167 (177)
Q Consensus       167 ~  167 (177)
                      .
T Consensus       144 p  144 (305)
T PRK08303        144 P  144 (305)
T ss_pred             H
Confidence            4

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.36  E-value=2.8e-11  Score=92.92  Aligned_cols=110  Identities=15%  Similarity=0.247  Sum_probs=81.4

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++++++||||+|+||.++++.|++.|   ++|++++|+...  . +.+.+.+..           ....++.++.+|++
T Consensus         5 ~~~k~vlItG~~~giG~~ia~~l~~~G---~~V~~~~r~~~~--~-~~~~~~l~~-----------~~~~~~~~~~~D~~   67 (259)
T PRK06125          5 LAGKRVLITGASKGIGAAAAEAFAAEG---CHLHLVARDADA--L-EALAADLRA-----------AHGVDVAVHALDLS   67 (259)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcC---CEEEEEeCCHHH--H-HHHHHHHHh-----------hcCCceEEEEecCC
Confidence            468999999999999999999999998   589999886521  1 111111110           01246788999999


Q ss_pred             CCCCCCCHHHHHHHhc---CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHH
Q psy17489        114 SEHLGLSEDSEQLIKS---KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAK  166 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~---~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~  166 (177)
                      +.      +++..+++   ++|++|||||...       ..+.|+..+++|+.+...+.+.+.
T Consensus        68 ~~------~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~  124 (259)
T PRK06125         68 SP------EAREQLAAEAGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAY  124 (259)
T ss_pred             CH------HHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence            97      56665544   6899999999642       135778889999999999988764

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.35  E-value=1.3e-11  Score=102.15  Aligned_cols=118  Identities=17%  Similarity=0.178  Sum_probs=85.5

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+.+++++||||+|+||..+++.|.+.|   .+|+++++....    +.+.+....              -+..++.+|+
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~G---a~vi~~~~~~~~----~~l~~~~~~--------------~~~~~~~~Dv  265 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDG---AHVVCLDVPAAG----EALAAVANR--------------VGGTALALDI  265 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCC---CEEEEEeCCccH----HHHHHHHHH--------------cCCeEEEEeC
Confidence            4578999999999999999999999998   688888875322    222222111              1235788899


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhcC---CCCCce
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKECV---NLKRFC  175 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~~---~~~~~v  175 (177)
                      ++.      +++..+++       ++|+|||+||...       ..+.++..+++|+.++.++.+.+....   +-.+||
T Consensus       266 ~~~------~~~~~~~~~~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv  339 (450)
T PRK08261        266 TAP------DAPARIAEHLAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIV  339 (450)
T ss_pred             CCH------HHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEE
Confidence            987      55555433       6899999999753       246678889999999999999987631   224666


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       340 ~~  341 (450)
T PRK08261        340 GV  341 (450)
T ss_pred             EE
Confidence            53

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.35  E-value=1.5e-11  Score=95.41  Aligned_cols=110  Identities=14%  Similarity=0.176  Sum_probs=79.5

Q ss_pred             cCCCceEEEecCCc--chHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489         33 FYRDGQILVTGGTG--FMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS  110 (177)
Q Consensus        33 ~~~~~~vlVtG~~G--~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  110 (177)
                      ++++|+++||||++  +||.++++.|++.|   ++|++.+|+..   ..+.+.+....             .....++++
T Consensus         4 ~l~~k~~lVTGas~~~GIG~aiA~~la~~G---a~V~~~~r~~~---~~~~~~~~~~~-------------~g~~~~~~~   64 (271)
T PRK06505          4 LMQGKRGLIMGVANDHSIAWGIAKQLAAQG---AELAFTYQGEA---LGKRVKPLAES-------------LGSDFVLPC   64 (271)
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHhCC---CEEEEecCchH---HHHHHHHHHHh-------------cCCceEEeC
Confidence            35789999999997  99999999999999   58888877531   11223322111             012346889


Q ss_pred             CCCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-----------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        111 NLESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-----------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       111 D~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-----------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      |+++.      ++++.++       .++|++|||||...           ..++|+..+++|+.++.++++.+..
T Consensus        65 Dv~d~------~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~  133 (271)
T PRK06505         65 DVEDI------ASVDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAK  133 (271)
T ss_pred             CCCCH------HHHHHHHHHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHH
Confidence            99998      5555543       46899999999642           1356778899999999999887754

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.35  E-value=3.6e-11  Score=92.51  Aligned_cols=120  Identities=11%  Similarity=0.122  Sum_probs=83.6

Q ss_pred             CCCceEEEecCC--cchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         34 YRDGQILVTGGT--GFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        34 ~~~~~vlVtG~~--G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      +.+|+++||||+  ++||.++++.|++.|   ++|++.+|+....   +.+++....         .  ...++.++++|
T Consensus         5 ~~~k~~lItGa~~s~GIG~aia~~la~~G---~~v~~~~r~~~~~---~~~~~~~~~---------~--~~~~~~~~~~D   67 (257)
T PRK08594          5 LEGKTYVVMGVANKRSIAWGIARSLHNAG---AKLVFTYAGERLE---KEVRELADT---------L--EGQESLLLPCD   67 (257)
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCC---CEEEEecCcccch---HHHHHHHHH---------c--CCCceEEEecC
Confidence            568999999997  899999999999999   5888887753222   233332221         0  02467889999


Q ss_pred             CCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-----------chHHHHHHHHHhHHHHHHHHHHHHhc-CCCC
Q psy17489        112 LESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-----------FDEALQKAIRANLYATKQMLNLAKEC-VNLK  172 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-----------~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~  172 (177)
                      ++++      ++++.++       .++|++|||||...           ..+.|...+++|+.++..+.+.+... .+-.
T Consensus        68 v~d~------~~v~~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g  141 (257)
T PRK08594         68 VTSD------EEITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGG  141 (257)
T ss_pred             CCCH------HHHHHHHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCc
Confidence            9998      5555443       46899999998642           12456677899999999888877643 1123


Q ss_pred             Ccee
Q psy17489        173 RFCE  176 (177)
Q Consensus       173 ~~v~  176 (177)
                      ++|+
T Consensus       142 ~Iv~  145 (257)
T PRK08594        142 SIVT  145 (257)
T ss_pred             eEEE
Confidence            5655

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.35  E-value=1.9e-11  Score=93.62  Aligned_cols=112  Identities=15%  Similarity=0.204  Sum_probs=80.7

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|.+.|+  ..|++++|+...  ........ .            ....++.++.+|+
T Consensus         3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~--~~V~~~~r~~~~--~~~~~~~l-~------------~~~~~~~~~~~D~   65 (260)
T PRK06198          3 RLDGKVALVTGGTQGLGAAIARAFAERGA--AGLVICGRNAEK--GEAQAAEL-E------------ALGAKAVFVQADL   65 (260)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCC--CeEEEEcCCHHH--HHHHHHHH-H------------hcCCeEEEEEccC
Confidence            36789999999999999999999999984  238888886421  11111111 1            0124577889999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      +++      +++..+++       ++|++||+||...       ..+.++..+++|+.++.++++.+.+
T Consensus        66 ~~~------~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  128 (260)
T PRK06198         66 SDV------EDCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIK  128 (260)
T ss_pred             CCH------HHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            987      55555443       6899999999743       2355667899999999999888754

>PRK08017 oxidoreductase; Provisional

Probab=99.34  E-value=2.1e-11  Score=93.16  Aligned_cols=110  Identities=17%  Similarity=0.152  Sum_probs=78.3

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      ++++||||+|+||.++++.|.+.|   .+|++++|+..      +++....               .++.++.+|+.+. 
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g---~~v~~~~r~~~------~~~~~~~---------------~~~~~~~~D~~~~-   57 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRG---YRVLAACRKPD------DVARMNS---------------LGFTGILLDLDDP-   57 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHH------HhHHHHh---------------CCCeEEEeecCCH-
Confidence            689999999999999999999998   58888888652      2221111               2467788999887 


Q ss_pred             CCCCHHHHHHHh--------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHH----HHHHHhcCCCCCceeC
Q psy17489        117 LGLSEDSEQLIK--------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQM----LNLAKECVNLKRFCEL  177 (177)
Q Consensus       117 ~~~~~~~~~~~~--------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~l----l~~~~~~~~~~~~v~v  177 (177)
                           +++..++        ..+|.++|++|...       ..+.++..+++|+.++.++    ++.+.+. +.+++|++
T Consensus        58 -----~~~~~~~~~i~~~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~~iv~~  131 (256)
T PRK08017         58 -----ESVERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPH-GEGRIVMT  131 (256)
T ss_pred             -----HHHHHHHHHHHHhcCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCCEEEEE
Confidence                 4444332        35789999999643       1345667899999998886    4445555 56677763

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.34  E-value=2.3e-11  Score=91.63  Aligned_cols=111  Identities=12%  Similarity=0.153  Sum_probs=80.5

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+++||||+|+||+++++.|.+.|   ++|++.+|+.      +++.+....              .++.++++|+++. 
T Consensus         1 m~vlItGas~giG~~ia~~l~~~g---~~v~~~~r~~------~~~~~~~~~--------------~~~~~~~~D~~~~-   56 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRNDG---HKVTLVGARR------DDLEVAAKE--------------LDVDAIVCDNTDP-   56 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHCC---CEEEEEeCCH------HHHHHHHHh--------------ccCcEEecCCCCH-
Confidence            369999999999999999999998   5888888864      222222111              1356788999998 


Q ss_pred             CCCCHHHHHHHhc----CCcEEEEcCcccC------------chHHHHHHHHHhHHHHHHHHHHHHhc-CCCCCcee
Q psy17489        117 LGLSEDSEQLIKS----KVNIIFHCAASLR------------FDEALQKAIRANLYATKQMLNLAKEC-VNLKRFCE  176 (177)
Q Consensus       117 ~~~~~~~~~~~~~----~~d~vi~~aa~~~------------~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~  176 (177)
                           +++..+++    ++|++||||+...            ..+.|+..+++|+.++.++++++.+. ..-.++|+
T Consensus        57 -----~~v~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~  128 (223)
T PRK05884         57 -----ASLEEARGLFPHHLDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIIS  128 (223)
T ss_pred             -----HHHHHHHHHHhhcCcEEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEE
Confidence                 56666554    5899999997410            13567788999999999999988652 11245654

>TIGR02415 23BDH acetoin reductases

Probab=99.34  E-value=2e-11  Score=93.13  Aligned_cols=117  Identities=15%  Similarity=0.137  Sum_probs=81.8

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+++||||+|+||.++++.|++.|   .+|+++.|+..  .. ..+.+...            ....++.++.+|++++ 
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G---~~v~~~~r~~~--~~-~~~~~~l~------------~~~~~~~~~~~Dl~~~-   61 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDG---FAVAVADLNEE--TA-KETAKEIN------------QAGGKAVAYKLDVSDK-   61 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHH--HH-HHHHHHHH------------hcCCeEEEEEcCCCCH-
Confidence            579999999999999999999998   58888888642  11 11111111            0124678899999998 


Q ss_pred             CCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh----cCCCCCceeC
Q psy17489        117 LGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE----CVNLKRFCEL  177 (177)
Q Consensus       117 ~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~v  177 (177)
                           +++.+++       ..+|++||+|+...       ..++++..+++|+.++..+++.+..    .....++|++
T Consensus        62 -----~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~  135 (254)
T TIGR02415        62 -----DQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINA  135 (254)
T ss_pred             -----HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEe
Confidence                 5555543       35799999999742       2356778899999999888776543    2122466653

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.34  E-value=3.6e-11  Score=91.18  Aligned_cols=122  Identities=17%  Similarity=0.126  Sum_probs=81.2

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++++++||||+|+||.++++.|++.|   .+|++++|+...  ..+...++...            ....+.++.+|+.
T Consensus         4 l~~k~vlItG~sggiG~~la~~l~~~g---~~V~~~~r~~~~--~~~~~~~l~~~------------~~~~~~~~~~D~~   66 (239)
T PRK08703          4 LSDKTILVTGASQGLGEQVAKAYAAAG---ATVILVARHQKK--LEKVYDAIVEA------------GHPEPFAIRFDLM   66 (239)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHcC---CEEEEEeCChHH--HHHHHHHHHHc------------CCCCcceEEeeec
Confidence            567899999999999999999999998   589999987631  11111111110            1134567788887


Q ss_pred             CCCCCCCHHHHHH-------Hh-cCCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCc
Q psy17489        114 SEHLGLSEDSEQL-------IK-SKVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRF  174 (177)
Q Consensus       114 ~~~~~~~~~~~~~-------~~-~~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~  174 (177)
                      +...    +.+..       .+ .++|++||+||...        ..+++...+++|+.++.++++.+.+.   .+..++
T Consensus        67 ~~~~----~~~~~~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~i  142 (239)
T PRK08703         67 SAEE----KEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASV  142 (239)
T ss_pred             ccch----HHHHHHHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEE
Confidence            6311    22222       23 46899999999632        13566678999999999998877542   134466


Q ss_pred             ee
Q psy17489        175 CE  176 (177)
Q Consensus       175 v~  176 (177)
                      |+
T Consensus       143 v~  144 (239)
T PRK08703        143 IF  144 (239)
T ss_pred             EE
Confidence            65

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.34  E-value=4e-11  Score=90.06  Aligned_cols=102  Identities=11%  Similarity=0.146  Sum_probs=77.8

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +++++||||+|+||+++++.|++.|   .+|++++|+..      ..+....               ..+.++.+|+++.
T Consensus         1 ~~~vlvtG~sg~iG~~la~~L~~~G---~~v~~~~r~~~------~~~~~~~---------------~~~~~~~~D~~~~   56 (222)
T PRK06953          1 MKTVLIVGASRGIGREFVRQYRADG---WRVIATARDAA------ALAALQA---------------LGAEALALDVADP   56 (222)
T ss_pred             CceEEEEcCCCchhHHHHHHHHhCC---CEEEEEECCHH------HHHHHHh---------------ccceEEEecCCCH
Confidence            3689999999999999999999998   58888888642      1111111               2356789999998


Q ss_pred             CCCCCHHHHHHHh---c--CCcEEEEcCcccC---------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        116 HLGLSEDSEQLIK---S--KVNIIFHCAASLR---------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       116 ~~~~~~~~~~~~~---~--~~d~vi~~aa~~~---------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                            +.+..++   .  ++|++||++|...         ..++++..+++|+.++.++++.+.+
T Consensus        57 ------~~v~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  116 (222)
T PRK06953         57 ------ASVAGLAWKLDGEALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLP  116 (222)
T ss_pred             ------HHHHHHHHHhcCCCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHH
Confidence                  5565543   2  4899999999752         2356778899999999999988865

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.34  E-value=2.6e-11  Score=92.30  Aligned_cols=108  Identities=12%  Similarity=0.118  Sum_probs=74.3

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +|+++||||+|+||..+++.|++.|   .+|++..++.. +...+...+. ..            ...++.++.+|+++.
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g---~~v~~~~~~~~-~~~~~~~~~~-~~------------~~~~~~~~~~Dl~~~   64 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARG---WSVGINYARDA-AAAEETADAV-RA------------AGGRACVVAGDVANE   64 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCC---CEEEEEeCCCH-HHHHHHHHHH-Hh------------cCCcEEEEEeccCCH
Confidence            4689999999999999999999998   46766554321 1111111111 10            124688999999987


Q ss_pred             CCCCCHHHHHHHh-------cCCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHH
Q psy17489        116 HLGLSEDSEQLIK-------SKVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAK  166 (177)
Q Consensus       116 ~~~~~~~~~~~~~-------~~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~  166 (177)
                            +++..++       .++|++||+||...        ..++++..+++|+.++..+++.+.
T Consensus        65 ------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  124 (248)
T PRK06947         65 ------ADVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAA  124 (248)
T ss_pred             ------HHHHHHHHHHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHH
Confidence                  4554443       36899999999642        134566789999999988876543

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.34  E-value=2.9e-11  Score=92.96  Aligned_cols=109  Identities=14%  Similarity=0.137  Sum_probs=79.2

Q ss_pred             CCCceEEEecC--CcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         34 YRDGQILVTGG--TGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        34 ~~~~~vlVtG~--~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      +.+|+++||||  +++||.++++.|++.|   ++|++.+|+...+ ..+.+.+.               ...++.++++|
T Consensus         5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G---~~v~l~~r~~~~~-~~~~~~~~---------------~~~~~~~~~~D   65 (256)
T PRK07889          5 LEGKRILVTGVITDSSIAFHVARVAQEQG---AEVVLTGFGRALR-LTERIAKR---------------LPEPAPVLELD   65 (256)
T ss_pred             ccCCEEEEeCCCCcchHHHHHHHHHHHCC---CEEEEecCccchh-HHHHHHHh---------------cCCCCcEEeCC
Confidence            57899999999  8999999999999999   6888888754211 11222111               11256788999


Q ss_pred             CCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------c----hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        112 LESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------F----DEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~----~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      ++++      ++++.++       .++|++|||||...       .    .+.++..+++|+.++..+.+.+..
T Consensus        66 v~~~------~~i~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~  133 (256)
T PRK07889         66 VTNE------EHLASLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLP  133 (256)
T ss_pred             CCCH------HHHHHHHHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            9998      4555443       46899999999752       1    245666799999999999888754

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.33  E-value=2.8e-11  Score=91.32  Aligned_cols=116  Identities=18%  Similarity=0.236  Sum_probs=82.8

Q ss_pred             EEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCCC
Q psy17489         39 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLG  118 (177)
Q Consensus        39 vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~  118 (177)
                      ++|||++|+||.++++.|++.|   ++|++++|+... .. +.+.....            ....++.++.+|+++.   
T Consensus         1 vlItG~~g~iG~~la~~l~~~G---~~v~~~~r~~~~-~~-~~~~~~~~------------~~~~~~~~~~~D~~~~---   60 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEG---AKVIITYRSSEE-GA-EEVVEELK------------AYGVKALGVVCDVSDR---   60 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCchh-HH-HHHHHHHH------------hcCCceEEEEecCCCH---
Confidence            5899999999999999999999   588888886521 11 11211111            0124578899999998   


Q ss_pred             CCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCceeC
Q psy17489        119 LSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VNLKRFCEL  177 (177)
Q Consensus       119 ~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~v  177 (177)
                         +.+..++.       .+|+|||++|....       .+.++..+++|+.++.++++.+.+.   .+.++||++
T Consensus        61 ---~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~  133 (239)
T TIGR01830        61 ---EDVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINI  133 (239)
T ss_pred             ---HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence               55555543       57999999997531       3566778999999999999988653   245577764

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.33  E-value=2.7e-11  Score=104.39  Aligned_cols=120  Identities=9%  Similarity=0.142  Sum_probs=86.7

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   ++|++++|++..  . +.+.+...            ....++.++.+|+
T Consensus       368 ~~~~k~vlItGas~giG~~la~~l~~~G---~~V~~~~r~~~~--~-~~~~~~~~------------~~~~~~~~~~~Dv  429 (657)
T PRK07201        368 PLVGKVVLITGASSGIGRATAIKVAEAG---ATVFLVARNGEA--L-DELVAEIR------------AKGGTAHAYTCDL  429 (657)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHH--H-HHHHHHHH------------hcCCcEEEEEecC
Confidence            3568999999999999999999999999   589999986521  1 11111111            0124688899999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc---------hHHHHHHHHHhHHHHHHHHHHHH----hcCCCC
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF---------DEALQKAIRANLYATKQMLNLAK----ECVNLK  172 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~---------~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~  172 (177)
                      ++.      +++..+++       ++|++|||||....         .++++..+++|+.++.++++.+.    +. +..
T Consensus       430 ~~~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g  502 (657)
T PRK07201        430 TDS------AAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRER-RFG  502 (657)
T ss_pred             CCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-CCC
Confidence            998      56665544       68999999996421         24567789999999998877753    33 456


Q ss_pred             CceeC
Q psy17489        173 RFCEL  177 (177)
Q Consensus       173 ~~v~v  177 (177)
                      +||++
T Consensus       503 ~iv~i  507 (657)
T PRK07201        503 HVVNV  507 (657)
T ss_pred             EEEEE
Confidence            77764

>KOG1201|consensus

Probab=99.33  E-value=2.2e-11  Score=93.73  Aligned_cols=116  Identities=18%  Similarity=0.206  Sum_probs=83.0

Q ss_pred             cccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489         31 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS  110 (177)
Q Consensus        31 ~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  110 (177)
                      .....|+.|+||||++++|+.++.+++++|   .++++.+.++...  ++..+...+             . .++..+.+
T Consensus        33 ~k~v~g~~vLITGgg~GlGr~ialefa~rg---~~~vl~Din~~~~--~etv~~~~~-------------~-g~~~~y~c   93 (300)
T KOG1201|consen   33 LKSVSGEIVLITGGGSGLGRLIALEFAKRG---AKLVLWDINKQGN--EETVKEIRK-------------I-GEAKAYTC   93 (300)
T ss_pred             hhhccCCEEEEeCCCchHHHHHHHHHHHhC---CeEEEEeccccch--HHHHHHHHh-------------c-CceeEEEe
Confidence            345689999999999999999999999999   6788888776432  122222211             1 36889999


Q ss_pred             CCCCCC-CCCCHHHHHHHhcCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHH
Q psy17489        111 NLESEH-LGLSEDSEQLIKSKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLA  165 (177)
Q Consensus       111 D~~~~~-~~~~~~~~~~~~~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~  165 (177)
                      |++++. +-...+.+++-++++|++|||||+...       .+..+..+++|+.+.+...++.
T Consensus        94 dis~~eei~~~a~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaF  156 (300)
T KOG1201|consen   94 DISDREEIYRLAKKVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAF  156 (300)
T ss_pred             cCCCHHHHHHHHHHHHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHH
Confidence            999983 111112223334479999999998642       4667788999999988877764

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.33  E-value=9.7e-11  Score=89.87  Aligned_cols=127  Identities=16%  Similarity=0.139  Sum_probs=82.7

Q ss_pred             cCCCceEEEecCCc--chHHHHHHHHHhhCCCcCeEEEEEeCCCCC-----ChHHHHHHHHhhhhhhcccccCcccCCCe
Q psy17489         33 FYRDGQILVTGGTG--FMGKLLIDKLLRSFPDIGAIYIMVRDKKGS-----SPEERVKNMLNSVIFDRLNKEVPDFRSKI  105 (177)
Q Consensus        33 ~~~~~~vlVtG~~G--~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  105 (177)
                      .+++|+++||||+|  +||.++++.|++.|   .+|++..|.....     ...+...+...     .+    .....++
T Consensus         3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G---~~vi~~~~~~~~~~~~~~~~~~~~~~~~~-----~~----~~~g~~~   70 (256)
T PRK12859          3 QLKNKVAVVTGVSRLDGIGAAICKELAEAG---ADIFFTYWTAYDKEMPWGVDQDEQIQLQE-----EL----LKNGVKV   70 (256)
T ss_pred             CcCCcEEEEECCCCCCChHHHHHHHHHHCC---CeEEEEecccccccccccccHHHHHHHHH-----HH----HhcCCeE
Confidence            46789999999995  89999999999999   5777765432110     00111111111     00    0123467


Q ss_pred             EEEeCCCCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---
Q psy17489        106 QVIPSNLESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---  168 (177)
Q Consensus       106 ~~~~~D~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---  168 (177)
                      .++++|+++.      +++..+++       ++|++||+||....       .+.++..+++|+.++..+.+.+...   
T Consensus        71 ~~~~~D~~~~------~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~  144 (256)
T PRK12859         71 SSMELDLTQN------DAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDK  144 (256)
T ss_pred             EEEEcCCCCH------HHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh
Confidence            8899999998      55555443       58999999996431       3467778999999999886554321   


Q ss_pred             CCCCCceeC
Q psy17489        169 VNLKRFCEL  177 (177)
Q Consensus       169 ~~~~~~v~v  177 (177)
                      .+-.+||++
T Consensus       145 ~~~g~iv~i  153 (256)
T PRK12859        145 KSGGRIINM  153 (256)
T ss_pred             cCCeEEEEE
Confidence            133467763

>PRK07069 short chain dehydrogenase; Validated

Probab=99.32  E-value=4.1e-11  Score=91.21  Aligned_cols=118  Identities=10%  Similarity=0.184  Sum_probs=79.0

Q ss_pred             eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCC
Q psy17489         38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHL  117 (177)
Q Consensus        38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~  117 (177)
                      +++||||+|+||.++++.|++.|   ++|++++|+.. ... +.+.+.+..        ..  ....+..+++|+.+.  
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G---~~v~~~~r~~~-~~~-~~~~~~~~~--------~~--~~~~~~~~~~D~~~~--   63 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQG---AKVFLTDINDA-AGL-DAFAAEINA--------AH--GEGVAFAAVQDVTDE--   63 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCcc-hHH-HHHHHHHHh--------cC--CCceEEEEEeecCCH--
Confidence            38999999999999999999999   58999888632 111 222221110        00  012345678899987  


Q ss_pred             CCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHH----HHHHHHHHHHhcCCCCCceeC
Q psy17489        118 GLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLY----ATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       118 ~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~----~~~~ll~~~~~~~~~~~~v~v  177 (177)
                          +++..++       .++|++||+||....       .+++...+++|+.    .+..+++.+++. +.++||++
T Consensus        64 ----~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~~  136 (251)
T PRK07069         64 ----AQWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRAS-QPASIVNI  136 (251)
T ss_pred             ----HHHHHHHHHHHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCcEEEEe
Confidence                5555543       368999999997542       3456678899998    555566666665 56777764

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.32  E-value=2.8e-11  Score=88.47  Aligned_cols=107  Identities=21%  Similarity=0.282  Sum_probs=81.3

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      ..|-+||||||+.+||..++++|.+.|   .+|++.+|++      +++.+..+             ..+.+....+|+.
T Consensus         3 ~tgnTiLITGG~sGIGl~lak~f~elg---N~VIi~gR~e------~~L~e~~~-------------~~p~~~t~v~Dv~   60 (245)
T COG3967           3 TTGNTILITGGASGIGLALAKRFLELG---NTVIICGRNE------ERLAEAKA-------------ENPEIHTEVCDVA   60 (245)
T ss_pred             ccCcEEEEeCCcchhhHHHHHHHHHhC---CEEEEecCcH------HHHHHHHh-------------cCcchheeeeccc
Confidence            467899999999999999999999999   6999999976      44444333             2367788889999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc---------hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF---------DEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~---------~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                      |.      ++.+.+++       ..+++|||||+...         .++.++-+.+|..++..|.+....+
T Consensus        61 d~------~~~~~lvewLkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lph  125 (245)
T COG3967          61 DR------DSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPH  125 (245)
T ss_pred             ch------hhHHHHHHHHHhhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHH
Confidence            97      44444432       57999999998531         2334556899999999888776543

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.32  E-value=4e-11  Score=91.03  Aligned_cols=107  Identities=16%  Similarity=0.141  Sum_probs=74.8

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEE-EeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM-VRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      ++++||||+|+||.++++.|++.|   ++|++. .|+.  ....+...+...             ...++.++.+|+.+.
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g---~~v~~~~~~~~--~~~~~~~~~~~~-------------~~~~~~~~~~D~~d~   63 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEG---YTVAVNYQQNL--HAAQEVVNLITQ-------------AGGKAFVLQADISDE   63 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCCh--HHHHHHHHHHHh-------------CCCeEEEEEccCCCH
Confidence            689999999999999999999998   467654 3432  111111111111             123578899999998


Q ss_pred             CCCCCHHHHHHHhc-------CCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        116 HLGLSEDSEQLIKS-------KVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       116 ~~~~~~~~~~~~~~-------~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                            +++..+++       .+|++||+|+...        ..++++..+++|+.++..+++.+..
T Consensus        64 ------~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  124 (247)
T PRK09730         64 ------NQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVK  124 (247)
T ss_pred             ------HHHHHHHHHHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence                  56665544       5789999999642        1345677899999999888776644

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.32  E-value=5.2e-11  Score=90.11  Aligned_cols=103  Identities=16%  Similarity=0.200  Sum_probs=76.8

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +|+++||||+|+||.++++.|++.|   ++|++++|++..  ..+.+..                  ..+.++.+|+.+.
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~--~~~~~~~------------------~~~~~~~~D~~~~   58 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQG---QPVIVSYRTHYP--AIDGLRQ------------------AGAQCIQADFSTN   58 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCC---CeEEEEeCCchh--HHHHHHH------------------cCCEEEEcCCCCH
Confidence            5799999999999999999999999   588988886531  1111111                  2357889999987


Q ss_pred             CCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        116 HLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       116 ~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                            +++..++       .++|++||+||...       ..+.++..+++|+.++..+.+.+..
T Consensus        59 ------~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~  118 (236)
T PRK06483         59 ------AGIMAFIDELKQHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALED  118 (236)
T ss_pred             ------HHHHHHHHHHHhhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHH
Confidence                  4444433       35899999999642       1466788899999999988776654

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.31  E-value=7.3e-12  Score=97.92  Aligned_cols=94  Identities=24%  Similarity=0.365  Sum_probs=68.7

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+|+||||+|++|.++...|.+.|   ..|+...|.                                    ..|+.+. 
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~---~~v~~~~r~------------------------------------~~dl~d~-   40 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERG---YEVIATSRS------------------------------------DLDLTDP-   40 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTS---EEEEEESTT------------------------------------CS-TTSH-
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCC---CEEEEeCch------------------------------------hcCCCCH-
Confidence            689999999999999999999887   477777552                                    4577776 


Q ss_pred             CCCCHHHHHHHhc--CCcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        117 LGLSEDSEQLIKS--KVNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       117 ~~~~~~~~~~~~~--~~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                           +.+...++  +.|+|||+||....   ....+..+++|+.++.+|+++|.+. +. ++||+
T Consensus        41 -----~~~~~~~~~~~pd~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~-~~-~li~~   99 (286)
T PF04321_consen   41 -----EAVAKLLEAFKPDVVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKER-GA-RLIHI   99 (286)
T ss_dssp             -----HHHHHHHHHH--SEEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHC-T--EEEEE
T ss_pred             -----HHHHHHHHHhCCCeEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHc-CC-cEEEe
Confidence                 67777765  58999999998754   3456678999999999999999997 55 77764

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PRK05855 short chain dehydrogenase; Validated

Probab=99.31  E-value=3.1e-11  Score=102.12  Aligned_cols=121  Identities=12%  Similarity=0.120  Sum_probs=86.2

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      ...+++++||||+|+||.++++.|.+.|   .+|++++|+...  . +.+.+....            ...++.++.+|+
T Consensus       312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G---~~v~~~~r~~~~--~-~~~~~~~~~------------~~~~~~~~~~Dv  373 (582)
T PRK05855        312 PFSGKLVVVTGAGSGIGRETALAFAREG---AEVVASDIDEAA--A-ERTAELIRA------------AGAVAHAYRVDV  373 (582)
T ss_pred             cCCCCEEEEECCcCHHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHHh------------cCCeEEEEEcCC
Confidence            3467899999999999999999999999   579998886421  1 112111110            124678899999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHh----cCCCCCc
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKE----CVNLKRF  174 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~  174 (177)
                      ++.      +++..+++       ++|++|||||....       .+.++..+++|+.++.++++.+..    .+.-.+|
T Consensus       374 ~~~------~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~i  447 (582)
T PRK05855        374 SDA------DAMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHI  447 (582)
T ss_pred             CCH------HHHHHHHHHHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEE
Confidence            998      55655543       58999999997532       356778899999999999887543    2112467


Q ss_pred             eeC
Q psy17489        175 CEL  177 (177)
Q Consensus       175 v~v  177 (177)
                      |++
T Consensus       448 v~~  450 (582)
T PRK05855        448 VNV  450 (582)
T ss_pred             EEE
Confidence            654

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.31  E-value=7.3e-11  Score=93.37  Aligned_cols=120  Identities=16%  Similarity=0.156  Sum_probs=82.6

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      .+++++||||+++||.++++.|++.|.  .+|++.+|+..      +..+....     +    .....++.++.+|+++
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~--~~V~l~~r~~~------~~~~~~~~-----l----~~~~~~~~~~~~Dl~~   64 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGE--WHVIMACRDFL------KAEQAAKS-----L----GMPKDSYTIMHLDLGS   64 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCC--CEEEEEeCCHH------HHHHHHHH-----h----cCCCCeEEEEEcCCCC
Confidence            367999999999999999999999982  37888888642      12211110     1    0012467788999999


Q ss_pred             CCCCCCHHHHHHHh-------cCCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHh----cC-CCCCc
Q psy17489        115 EHLGLSEDSEQLIK-------SKVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKE----CV-NLKRF  174 (177)
Q Consensus       115 ~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~~~  174 (177)
                      .      ++++.++       .++|++|||||...        ..+.++..+++|+.++..+.+.+..    .+ +..++
T Consensus        65 ~------~~v~~~~~~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~I  138 (314)
T TIGR01289        65 L------DSVRQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRL  138 (314)
T ss_pred             H------HHHHHHHHHHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeE
Confidence            8      4554443       36899999999642        1256777899999999888776543    21 13577


Q ss_pred             eeC
Q psy17489        175 CEL  177 (177)
Q Consensus       175 v~v  177 (177)
                      |+|
T Consensus       139 V~v  141 (314)
T TIGR01289       139 IIV  141 (314)
T ss_pred             EEE
Confidence            764

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.31  E-value=3.8e-11  Score=92.52  Aligned_cols=109  Identities=17%  Similarity=0.138  Sum_probs=77.0

Q ss_pred             CCCceEEEecC--CcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         34 YRDGQILVTGG--TGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        34 ~~~~~vlVtG~--~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      +++|+++||||  +++||.++++.|++.|   .+|++.+|.+   +..+.+++...             .......+++|
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G---~~v~~~~~~~---~~~~~~~~~~~-------------~~~~~~~~~~D   64 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQG---AELAFTYVVD---KLEERVRKMAA-------------ELDSELVFRCD   64 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCC---CEEEEEcCcH---HHHHHHHHHHh-------------ccCCceEEECC
Confidence            67899999997  6799999999999999   5788776642   12233333221             11234578999


Q ss_pred             CCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc------------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        112 LESEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF------------DEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~------------~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      +++.      ++++.++       .++|++|||||....            .+.|+..+++|+.++..+.+.+..
T Consensus        65 v~~~------~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p  133 (261)
T PRK08690         65 VASD------DEINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARP  133 (261)
T ss_pred             CCCH------HHHHHHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHH
Confidence            9998      5565544       368999999997531            134566788999999888876543

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.30  E-value=4.8e-11  Score=92.13  Aligned_cols=109  Identities=16%  Similarity=0.153  Sum_probs=78.5

Q ss_pred             CCCceEEEecCCc--chHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         34 YRDGQILVTGGTG--FMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        34 ~~~~~vlVtG~~G--~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      +++|+++||||++  +||.++++.|++.|   ++|+..+|+.   ...+.+.+...             ..+...++.+|
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G---~~vil~~r~~---~~~~~~~~~~~-------------~~~~~~~~~~D   64 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREG---AELAFTYQND---KLKGRVEEFAA-------------QLGSDIVLPCD   64 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCC---CEEEEEecch---hHHHHHHHHHh-------------ccCCceEeecC
Confidence            5789999999985  89999999999999   5788777752   12222332211             11345678899


Q ss_pred             CCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc------------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        112 LESEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF------------DEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~------------~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      +++.      ++++.++       .++|++|||||....            .+.|+..+++|+.++..+.+.+..
T Consensus        65 l~~~------~~v~~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  133 (262)
T PRK07984         65 VAED------ASIDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRS  133 (262)
T ss_pred             CCCH------HHHHHHHHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHH
Confidence            9998      5665544       358999999986421            245667889999999888887653

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.30  E-value=5.1e-11  Score=91.77  Aligned_cols=118  Identities=12%  Similarity=0.104  Sum_probs=81.1

Q ss_pred             CCCceEEEecC--CcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         34 YRDGQILVTGG--TGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        34 ~~~~~vlVtG~--~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      +++|+++||||  +++||.++++.|++.|   ++|++.+|...   ..+.+.+...+             ......+.+|
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G---~~v~~~~~~~~---~~~~~~~~~~~-------------~~~~~~~~~D   64 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREG---AELAFTYVGDR---FKDRITEFAAE-------------FGSDLVFPCD   64 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCC---CeEEEEccchH---HHHHHHHHHHh-------------cCCcceeecc
Confidence            57899999996  6799999999999999   57777765421   11333322211             0123467899


Q ss_pred             CCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc------------hHHHHHHHHHhHHHHHHHHHHHHhc-CCC
Q psy17489        112 LESEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF------------DEALQKAIRANLYATKQMLNLAKEC-VNL  171 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~------------~~~~~~~~~~nv~~~~~ll~~~~~~-~~~  171 (177)
                      ++++      ++++.++       .++|++|||||....            .++|+..+++|+.++..+.+.+... .+-
T Consensus        65 v~d~------~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~  138 (260)
T PRK06997         65 VASD------EQIDALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDD  138 (260)
T ss_pred             CCCH------HHHHHHHHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCC
Confidence            9998      5565544       468999999987421            2467778999999999998887653 122


Q ss_pred             CCcee
Q psy17489        172 KRFCE  176 (177)
Q Consensus       172 ~~~v~  176 (177)
                      .++|+
T Consensus       139 g~Ii~  143 (260)
T PRK06997        139 ASLLT  143 (260)
T ss_pred             ceEEE
Confidence            35554

>KOG1208|consensus

Probab=99.30  E-value=1.7e-11  Score=96.65  Aligned_cols=121  Identities=18%  Similarity=0.225  Sum_probs=88.5

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC-CCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK-GSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      .+.+++++||||+++||..+++.|...|   .+|+...|+.. .+.+.+++..              .....++.++++|
T Consensus        32 ~~~~~~~vVTGansGIG~eta~~La~~G---a~Vv~~~R~~~~~~~~~~~i~~--------------~~~~~~i~~~~lD   94 (314)
T KOG1208|consen   32 DLSGKVALVTGATSGIGFETARELALRG---AHVVLACRNEERGEEAKEQIQK--------------GKANQKIRVIQLD   94 (314)
T ss_pred             cCCCcEEEEECCCCchHHHHHHHHHhCC---CEEEEEeCCHHHHHHHHHHHHh--------------cCCCCceEEEECC
Confidence            4567999999999999999999999999   79999999862 2212222221              1123678899999


Q ss_pred             CCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-----hHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCce
Q psy17489        112 LESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-----DEALQKAIRANLYATKQMLNLAK----ECVNLKRFC  175 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-----~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v  175 (177)
                      +++.      .++....+       ..|++|+|||+...     .+..+..+.+|..|.+.+.+.+.    .. ...|+|
T Consensus        95 Lssl------~SV~~fa~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s-~~~RIV  167 (314)
T KOG1208|consen   95 LSSL------KSVRKFAEEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRS-APSRIV  167 (314)
T ss_pred             CCCH------HHHHHHHHHHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhC-CCCCEE
Confidence            9998      56655433       57999999998542     23466679999999888877654    33 336888


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      +|
T Consensus       168 ~v  169 (314)
T KOG1208|consen  168 NV  169 (314)
T ss_pred             EE
Confidence            75

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.30  E-value=3.1e-11  Score=92.07  Aligned_cols=115  Identities=14%  Similarity=0.195  Sum_probs=79.8

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+++||||+|+||+++++.|++.|   ++|++++|++.     +.+.....            ....++.++.+|+++. 
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g---~~V~~~~r~~~-----~~~~~~~~------------~~~~~~~~~~~D~~~~-   60 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKG---THVISISRTEN-----KELTKLAE------------QYNSNLTFHSLDLQDV-   60 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcC---CEEEEEeCCch-----HHHHHHHh------------ccCCceEEEEecCCCH-
Confidence            689999999999999999999998   58898888652     11221111            0124688899999998 


Q ss_pred             CCCCHHHHHHHhcCC-----------cEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHh----cCCCCC
Q psy17489        117 LGLSEDSEQLIKSKV-----------NIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKE----CVNLKR  173 (177)
Q Consensus       117 ~~~~~~~~~~~~~~~-----------d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~  173 (177)
                           +++..+++.+           .++||+||...        ..+.+.+.+++|+.++..+++.+..    .++.++
T Consensus        61 -----~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~  135 (251)
T PRK06924         61 -----HELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKR  135 (251)
T ss_pred             -----HHHHHHHHHHHHhcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCce
Confidence                 5666655421           27999998642        1355677889999997777766543    223456


Q ss_pred             ceeC
Q psy17489        174 FCEL  177 (177)
Q Consensus       174 ~v~v  177 (177)
                      ||++
T Consensus       136 iv~~  139 (251)
T PRK06924        136 VINI  139 (251)
T ss_pred             EEEe
Confidence            7764

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.29  E-value=9.7e-11  Score=88.67  Aligned_cols=115  Identities=15%  Similarity=0.157  Sum_probs=80.0

Q ss_pred             EEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCCC
Q psy17489         39 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLG  118 (177)
Q Consensus        39 vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~  118 (177)
                      ++||||+|+||.++++.|.+.|   .+|++++|+... .. +.+.+...            ....++.++.+|+++.   
T Consensus         1 vlItGas~giG~~~a~~l~~~G---~~v~~~~~~~~~-~~-~~~~~~l~------------~~~~~~~~~~~Dl~~~---   60 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADG---FEICVHYHSGRS-DA-ESVVSAIQ------------AQGGNARLLQFDVADR---   60 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCCHH-HH-HHHHHHHH------------HcCCeEEEEEccCCCH---
Confidence            5899999999999999999999   578888775421 11 11111111            0124688999999998   


Q ss_pred             CCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHH-----hcCCCCCceeC
Q psy17489        119 LSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAK-----ECVNLKRFCEL  177 (177)
Q Consensus       119 ~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~-----~~~~~~~~v~v  177 (177)
                         +++..+++       .+|.+||++|...       ..++++.++++|+.++.++++.+.     +. +..+||++
T Consensus        61 ---~~~~~~~~~~~~~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~iv~v  134 (239)
T TIGR01831        61 ---VACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRAR-QGGRIITL  134 (239)
T ss_pred             ---HHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhc-CCeEEEEE
Confidence               55555433       5799999999642       245677889999999999988652     22 33566653

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.29  E-value=3e-11  Score=90.90  Aligned_cols=103  Identities=14%  Similarity=0.155  Sum_probs=78.1

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +++++||||+|++|.++++.|++.|   .+|++++|++...   +.+..                 ..++.++.+|+++.
T Consensus         1 ~k~vlItG~sg~iG~~la~~l~~~G---~~V~~~~r~~~~~---~~~~~-----------------~~~~~~~~~D~~d~   57 (225)
T PRK08177          1 KRTALIIGASRGLGLGLVDRLLERG---WQVTATVRGPQQD---TALQA-----------------LPGVHIEKLDMNDP   57 (225)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHhCC---CEEEEEeCCCcch---HHHHh-----------------ccccceEEcCCCCH
Confidence            3689999999999999999999999   5899999876432   11211                 13567788999987


Q ss_pred             CCCCCHHHHHHHhc-----CCcEEEEcCcccCc---------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        116 HLGLSEDSEQLIKS-----KVNIIFHCAASLRF---------DEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       116 ~~~~~~~~~~~~~~-----~~d~vi~~aa~~~~---------~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                            ++++.+++     ++|+|||+||....         .+++...+++|+.++..+.+.+..
T Consensus        58 ------~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  117 (225)
T PRK08177         58 ------ASLDQLLQRLQGQRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLG  117 (225)
T ss_pred             ------HHHHHHHHHhhcCCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHH
Confidence                  55655544     58999999987421         245667789999999999888764

>PRK06484 short chain dehydrogenase; Validated

Probab=99.29  E-value=8.7e-11  Score=98.72  Aligned_cols=107  Identities=15%  Similarity=0.198  Sum_probs=80.9

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      .++|+++||||+++||.++++.|.+.|   ++|+.++|+..      .+.+....            ...++.++.+|++
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G---~~V~~~~r~~~------~~~~~~~~------------~~~~~~~~~~D~~   61 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAG---DQVVVADRNVE------RARERADS------------LGPDHHALAMDVS   61 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHH------HHHHHHHH------------hCCceeEEEeccC
Confidence            368899999999999999999999999   68998888652      22222111            1235678899999


Q ss_pred             CCCCCCCHHHHHHHh-------cCCcEEEEcCcccC---------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLR---------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~---------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      ++      +++..++       .++|++|||||...         ..++++..+++|+.++..+++.+..
T Consensus        62 ~~------~~~~~~~~~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  125 (520)
T PRK06484         62 DE------AQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALR  125 (520)
T ss_pred             CH------HHHHHHHHHHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            98      5555544       36899999998621         1356788999999999999888764

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.28  E-value=4.3e-11  Score=90.08  Aligned_cols=112  Identities=15%  Similarity=0.147  Sum_probs=82.5

Q ss_pred             EEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCCCC
Q psy17489         40 LVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLGL  119 (177)
Q Consensus        40 lVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~  119 (177)
                      +||||+|+||.++++.|++.|   .+|++++|+..      ++......     +    . ...++.++.+|+++.    
T Consensus         1 lItGas~~iG~~~a~~l~~~G---~~v~~~~r~~~------~~~~~~~~-----~----~-~~~~~~~~~~Dl~~~----   57 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEG---ARVTIASRSRD------RLAAAARA-----L----G-GGAPVRTAALDITDE----   57 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCC---CEEEEEeCCHH------HHHHHHHH-----H----h-cCCceEEEEccCCCH----
Confidence            599999999999999999999   58899888642      22221110     0    0 124678899999998    


Q ss_pred             CHHHHHHHhc---CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        120 SEDSEQLIKS---KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       120 ~~~~~~~~~~---~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                        +++..+++   ++|++||++|....       .+.++..+++|+.++.++.+..... +..+||++
T Consensus        58 --~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~g~iv~~  122 (230)
T PRK07041         58 --AAVDAFFAEAGPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIA-PGGSLTFV  122 (230)
T ss_pred             --HHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhc-CCeEEEEE
Confidence              67777665   58999999997431       3567788999999999999965544 55677763

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.28  E-value=8.5e-11  Score=90.94  Aligned_cols=118  Identities=12%  Similarity=0.149  Sum_probs=80.0

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+++||||+|+||.++++.|++.|   ++|++++|++..  .++...+....            ....+.++.+|+.++ 
T Consensus         1 k~vlItGas~giG~~la~~la~~G---~~vv~~~r~~~~--~~~~~~~~~~~------------~~~~~~~~~~D~~~~-   62 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQG---AELFLTDRDADG--LAQTVADARAL------------GGTVPEHRALDISDY-   62 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCHHH--HHHHHHHHHhc------------CCCcceEEEeeCCCH-
Confidence            479999999999999999999998   578888886421  11111111000            012345678999987 


Q ss_pred             CCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh----cCCCCCceeC
Q psy17489        117 LGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE----CVNLKRFCEL  177 (177)
Q Consensus       117 ~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~v  177 (177)
                           +.+..++       .++|++||++|...       ..++++..+++|+.++..+++.+..    .+...+||++
T Consensus        63 -----~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~i  136 (272)
T PRK07832         63 -----DAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNV  136 (272)
T ss_pred             -----HHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEE
Confidence                 4544433       35899999999642       2356677899999999999998743    1123466653

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.27  E-value=9.7e-11  Score=90.02  Aligned_cols=114  Identities=15%  Similarity=0.190  Sum_probs=80.5

Q ss_pred             ccCCCceEEEecCCc-chHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489         32 DFYRDGQILVTGGTG-FMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS  110 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G-~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  110 (177)
                      ..+.+++++||||+| +||.++++.|++.|   .+|++.+|+...  .++ ..+....        ..  ...++.++++
T Consensus        13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~G---~~V~~~~~~~~~--~~~-~~~~~~~--------~~--~~~~~~~~~~   76 (262)
T PRK07831         13 GLLAGKVVLVTAAAGTGIGSATARRALEEG---ARVVISDIHERR--LGE-TADELAA--------EL--GLGRVEAVVC   76 (262)
T ss_pred             cccCCCEEEEECCCcccHHHHHHHHHHHcC---CEEEEEeCCHHH--HHH-HHHHHHH--------hc--CCceEEEEEc
Confidence            345689999999997 79999999999999   578888876421  111 1111110        00  0135788999


Q ss_pred             CCCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        111 NLESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       111 D~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      |+++.      +++..++       .++|++|||||...       ..+.+...+++|+.++..+++.+..
T Consensus        77 Dl~~~------~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  141 (262)
T PRK07831         77 DVTSE------AQVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALR  141 (262)
T ss_pred             cCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            99997      5555544       36899999999642       1356778899999999998887654

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.27  E-value=3.4e-11  Score=93.72  Aligned_cols=96  Identities=18%  Similarity=0.210  Sum_probs=75.0

Q ss_pred             eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCC
Q psy17489         38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHL  117 (177)
Q Consensus        38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~  117 (177)
                      +|+||||+|++|++++++|++.|   .+|++++|++....                        ..++..+.+|+.|+  
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g---~~V~~~~R~~~~~~------------------------~~~~~~~~~d~~d~--   51 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAAS---VPFLVASRSSSSSA------------------------GPNEKHVKFDWLDE--   51 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCC---CcEEEEeCCCcccc------------------------CCCCccccccCCCH--
Confidence            48999999999999999999998   58999999864310                        13566778899998  


Q ss_pred             CCCHHHHHHHh------cC-CcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        118 GLSEDSEQLIK------SK-VNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       118 ~~~~~~~~~~~------~~-~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                          +.+..++      ++ +|.++|+++.....          .....+++++|++. +++||||+
T Consensus        52 ----~~l~~a~~~~~~~~g~~d~v~~~~~~~~~~----------~~~~~~~i~aa~~~-gv~~~V~~  103 (285)
T TIGR03649        52 ----DTWDNPFSSDDGMEPEISAVYLVAPPIPDL----------APPMIKFIDFARSK-GVRRFVLL  103 (285)
T ss_pred             ----HHHHHHHhcccCcCCceeEEEEeCCCCCCh----------hHHHHHHHHHHHHc-CCCEEEEe
Confidence                7888887      56 99999998753211          12345789999998 99999984

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.27  E-value=1.4e-10  Score=87.71  Aligned_cols=101  Identities=19%  Similarity=0.334  Sum_probs=74.3

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+++||||+|+||++++++|++.|.. ..++...|+....                       ....++.++++|+++. 
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~-~~v~~~~~~~~~~-----------------------~~~~~~~~~~~Dls~~-   55 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPD-ATVHATYRHHKPD-----------------------FQHDNVQWHALDVTDE-   55 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCC-CEEEEEccCCccc-----------------------cccCceEEEEecCCCH-
Confidence            58999999999999999999998643 3565555543211                       0125788899999997 


Q ss_pred             CCCCHHHHHHH---hcCCcEEEEcCcccCc-------------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        117 LGLSEDSEQLI---KSKVNIIFHCAASLRF-------------DEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       117 ~~~~~~~~~~~---~~~~d~vi~~aa~~~~-------------~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                           +.++.+   ++++|++|||||....             .+.+...+.+|+.++..+.+.+..
T Consensus        56 -----~~~~~~~~~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~  117 (235)
T PRK09009         56 -----AEIKQLSEQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTP  117 (235)
T ss_pred             -----HHHHHHHHhcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHh
Confidence                 454443   4579999999997531             134567889999999988887754

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.27  E-value=1e-10  Score=92.87  Aligned_cols=126  Identities=15%  Similarity=0.158  Sum_probs=81.6

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      .|+.++||||+|+||.++++.|++.|   .+|++++|+++.  . +.+.+.+..        ..  ...++..+.+|+++
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G---~~Vil~~R~~~~--l-~~~~~~l~~--------~~--~~~~~~~~~~Dl~~  115 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKG---LNLVLVARNPDK--L-KDVSDSIQS--------KY--SKTQIKTVVVDFSG  115 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCC---CCEEEEECCHHH--H-HHHHHHHHH--------HC--CCcEEEEEEEECCC
Confidence            47899999999999999999999999   588999987521  1 111111110        00  01356778889985


Q ss_pred             CCCCCCHHHHHHHhcC--CcEEEEcCcccC---------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCceeC
Q psy17489        115 EHLGLSEDSEQLIKSK--VNIIFHCAASLR---------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFCEL  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~--~d~vi~~aa~~~---------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~v  177 (177)
                      . .....+.+.+.+++  +|++|||||...         ..+.++..+++|+.++..+.+.+...   .+..++|++
T Consensus       116 ~-~~~~~~~l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~i  191 (320)
T PLN02780        116 D-IDEGVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINI  191 (320)
T ss_pred             C-cHHHHHHHHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEE
Confidence            2 10011223333443  569999999742         13456678999999999998886531   144566653

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.27  E-value=9.2e-11  Score=90.32  Aligned_cols=110  Identities=13%  Similarity=0.121  Sum_probs=78.5

Q ss_pred             cCCCceEEEecCCc--chHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489         33 FYRDGQILVTGGTG--FMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS  110 (177)
Q Consensus        33 ~~~~~~vlVtG~~G--~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  110 (177)
                      .+++|+++||||++  +||.++++.|.+.|   ++|+..+|++.   .++.+.++...             .....++++
T Consensus         5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G---~~v~~~~r~~~---~~~~~~~l~~~-------------~g~~~~~~~   65 (260)
T PRK06603          5 LLQGKKGLITGIANNMSISWAIAQLAKKHG---AELWFTYQSEV---LEKRVKPLAEE-------------IGCNFVSEL   65 (260)
T ss_pred             ccCCcEEEEECCCCCcchHHHHHHHHHHcC---CEEEEEeCchH---HHHHHHHHHHh-------------cCCceEEEc
Confidence            45789999999997  89999999999999   57887776521   22233332211             012235789


Q ss_pred             CCCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-----------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        111 NLESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-----------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       111 D~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-----------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      |++++      ++++.++       .++|++|||||...           ..+.|+..+++|+.++..+++.+..
T Consensus        66 Dv~~~------~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~  134 (260)
T PRK06603         66 DVTNP------KSISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEA  134 (260)
T ss_pred             cCCCH------HHHHHHHHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99998      5555544       36899999998642           1356778899999999999887653

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.27  E-value=1.2e-10  Score=89.49  Aligned_cols=116  Identities=17%  Similarity=0.171  Sum_probs=77.5

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+++||||+|+||.++++.|++.|   ++|++.+|++..  . +...+.+.             ...++.++.+|+++. 
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G---~~V~~~~r~~~~--~-~~~~~~l~-------------~~~~~~~~~~Dv~d~-   60 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKG---ARVVISSRNEEN--L-EKALKELK-------------EYGEVYAVKADLSDK-   60 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcC---CEEEEEeCCHHH--H-HHHHHHHH-------------hcCCceEEEcCCCCH-
Confidence            579999999999999999999999   588888886421  1 11111111             013577899999997 


Q ss_pred             CCCCHHHHHHHh-------cCCcEEEEcCcccC-----c----hHHHHHHHHHhHHHHHHHHHHH----HhcCCCCCcee
Q psy17489        117 LGLSEDSEQLIK-------SKVNIIFHCAASLR-----F----DEALQKAIRANLYATKQMLNLA----KECVNLKRFCE  176 (177)
Q Consensus       117 ~~~~~~~~~~~~-------~~~d~vi~~aa~~~-----~----~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~  176 (177)
                           +++..++       .++|++|||||...     .    .+++...+.+|+.++..+.+.+    .+..+..+||+
T Consensus        61 -----~~~~~~~~~~~~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~  135 (259)
T PRK08340         61 -----DDLKNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVY  135 (259)
T ss_pred             -----HHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEE
Confidence                 5555544       36899999999642     1    2345566788888776665443    21113456776


Q ss_pred             C
Q psy17489        177 L  177 (177)
Q Consensus       177 v  177 (177)
                      +
T Consensus       136 i  136 (259)
T PRK08340        136 L  136 (259)
T ss_pred             E
Confidence            4

>PRK08324 short chain dehydrogenase; Validated

Probab=99.26  E-value=1.5e-10  Score=100.32  Aligned_cols=119  Identities=18%  Similarity=0.138  Sum_probs=86.2

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+.+++++||||+|+||.++++.|.+.|   .+|++++|+...  . +.+.....            .. .++.++.+|+
T Consensus       419 ~l~gk~vLVTGasggIG~~la~~L~~~G---a~Vvl~~r~~~~--~-~~~~~~l~------------~~-~~v~~v~~Dv  479 (681)
T PRK08324        419 PLAGKVALVTGAAGGIGKATAKRLAAEG---ACVVLADLDEEA--A-EAAAAELG------------GP-DRALGVACDV  479 (681)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCc---CEEEEEeCCHHH--H-HHHHHHHh------------cc-CcEEEEEecC
Confidence            3578999999999999999999999998   589999987521  1 11111111            01 3688899999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh----cCCC-CC
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE----CVNL-KR  173 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~-~~  173 (177)
                      ++.      +.+..+++       ++|+|||+||...       ..+.++..+++|+.++..+++.+.+    . +. .+
T Consensus       480 td~------~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~-~~~g~  552 (681)
T PRK08324        480 TDE------AAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQ-GLGGS  552 (681)
T ss_pred             CCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCcE
Confidence            997      55555443       6899999999643       2356778899999999999777643    3 33 56


Q ss_pred             ceeC
Q psy17489        174 FCEL  177 (177)
Q Consensus       174 ~v~v  177 (177)
                      ||++
T Consensus       553 iV~v  556 (681)
T PRK08324        553 IVFI  556 (681)
T ss_pred             EEEE
Confidence            7764

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.25  E-value=3.8e-11  Score=103.86  Aligned_cols=93  Identities=23%  Similarity=0.183  Sum_probs=69.5

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      ..|+|+||||+||||++|++.|.+.|+   .|..                                       ..+|++|
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~---~v~~---------------------------------------~~~~l~d  416 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEKQGI---AYEY---------------------------------------GKGRLED  416 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHhCCC---eEEe---------------------------------------ecccccc
Confidence            347899999999999999999998884   4321                                       1123444


Q ss_pred             CCCCCCHHHHHHHhc--CCcEEEEcCcccC---c---hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCcee
Q psy17489        115 EHLGLSEDSEQLIKS--KVNIIFHCAASLR---F---DEALQKAIRANLYATKQMLNLAKECVNLKRFCE  176 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~--~~d~vi~~aa~~~---~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~  176 (177)
                      .      +.+...+.  ++|+|||+||.++   .   ......++++|+.++.+++++|++. +++++++
T Consensus       417 ~------~~v~~~i~~~~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~-g~~~v~~  479 (668)
T PLN02260        417 R------SSLLADIRNVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCREN-GLLMMNF  479 (668)
T ss_pred             H------HHHHHHHHhhCCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHc-CCeEEEE
Confidence            4      45555554  6899999999863   2   2345678899999999999999998 7865543

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.25  E-value=1.6e-10  Score=87.91  Aligned_cols=109  Identities=17%  Similarity=0.236  Sum_probs=76.9

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +.+++++||||+|+||.++++.|.+.|   .+|++++|+..      ++......     +    .....++.++++|++
T Consensus         3 ~~~~~~lItG~~g~iG~~~a~~l~~~G---~~vi~~~r~~~------~~~~~~~~-----~----~~~~~~~~~~~~D~~   64 (253)
T PRK08217          3 LKDKVIVITGGAQGLGRAMAEYLAQKG---AKLALIDLNQE------KLEEAVAE-----C----GALGTEVRGYAANVT   64 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHH------HHHHHHHH-----H----HhcCCceEEEEcCCC
Confidence            468899999999999999999999998   57888888642      11111110     0    001246788999999


Q ss_pred             CCCCCCCHHHHHHHh-------cCCcEEEEcCcccC----------------chHHHHHHHHHhHHHHHHHHHHHH
Q psy17489        114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLR----------------FDEALQKAIRANLYATKQMLNLAK  166 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~----------------~~~~~~~~~~~nv~~~~~ll~~~~  166 (177)
                      +.      +++..++       .++|+|||+||...                ..+.+...+++|+.++..+.+.+.
T Consensus        65 ~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~  134 (253)
T PRK08217         65 DE------EDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAA  134 (253)
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence            87      4444433       35799999999532                124566788999999988876544

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.24  E-value=2.9e-10  Score=98.46  Aligned_cols=123  Identities=14%  Similarity=0.053  Sum_probs=84.5

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+.+|+++||||+|+||+++++.|++.|   ++|++++|+...  . +.+.+.+..    .    .  ...++..+.+|+
T Consensus       411 ~l~gkvvLVTGasggIG~aiA~~La~~G---a~Vvi~~r~~~~--~-~~~~~~l~~----~----~--~~~~~~~v~~Dv  474 (676)
T TIGR02632       411 TLARRVAFVTGGAGGIGRETARRLAAEG---AHVVLADLNLEA--A-EAVAAEING----Q----F--GAGRAVALKMDV  474 (676)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHhCC---CEEEEEeCCHHH--H-HHHHHHHHh----h----c--CCCcEEEEECCC
Confidence            4578999999999999999999999999   589998886421  1 111111110    0    0  113567889999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCc
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAK----ECVNLKRF  174 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~  174 (177)
                      ++.      +++..+++       ++|++|||||....       .+.|+..+++|+.+...+.+.+.    +.+.-.+|
T Consensus       475 td~------~~v~~a~~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~I  548 (676)
T TIGR02632       475 TDE------QAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNI  548 (676)
T ss_pred             CCH------HHHHHHHHHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEE
Confidence            998      56666554       68999999997431       35677789999999888765543    22112367


Q ss_pred             eeC
Q psy17489        175 CEL  177 (177)
Q Consensus       175 v~v  177 (177)
                      ||+
T Consensus       549 V~i  551 (676)
T TIGR02632       549 VFI  551 (676)
T ss_pred             EEE
Confidence            663

>KOG4169|consensus

Probab=99.24  E-value=2.7e-11  Score=89.78  Aligned_cols=109  Identities=17%  Similarity=0.243  Sum_probs=79.1

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      ++||++++|||.|+||..+++.|++.|   ..+.++.-+.+..+...++...              ....++.|+++|++
T Consensus         3 ~tGKna~vtggagGIGl~~sk~Ll~kg---ik~~~i~~~~En~~a~akL~ai--------------~p~~~v~F~~~DVt   65 (261)
T KOG4169|consen    3 LTGKNALVTGGAGGIGLATSKALLEKG---IKVLVIDDSEENPEAIAKLQAI--------------NPSVSVIFIKCDVT   65 (261)
T ss_pred             ccCceEEEecCCchhhHHHHHHHHHcC---chheeehhhhhCHHHHHHHhcc--------------CCCceEEEEEeccc
Confidence            569999999999999999999999998   3444444433332222222221              12367899999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHH
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAK  166 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~  166 (177)
                      +.      .+++++++       .+|++||+||+.. ..+|+..+.+|+.+..+-...+.
T Consensus        66 ~~------~~~~~~f~ki~~~fg~iDIlINgAGi~~-dkd~e~Ti~vNLtgvin~T~~al  118 (261)
T KOG4169|consen   66 NR------GDLEAAFDKILATFGTIDILINGAGILD-DKDWERTINVNLTGVINGTQLAL  118 (261)
T ss_pred             cH------HHHHHHHHHHHHHhCceEEEEccccccc-chhHHHhhccchhhhhhhhhhhh
Confidence            96      56666544       6899999999865 67899999999998766655543

>KOG0747|consensus

Probab=99.24  E-value=9.3e-12  Score=94.92  Aligned_cols=119  Identities=18%  Similarity=0.314  Sum_probs=89.5

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      +.++||||.||||++.+..+... |.-.+.+.++.-.-... ...++..              .+.++.+++.+|+.+. 
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~-~p~~~~v~idkL~~~s~-~~~l~~~--------------~n~p~ykfv~~di~~~-   69 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDK-YPDYKFVNLDKLDYCSN-LKNLEPV--------------RNSPNYKFVEGDIADA-   69 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccC-CCCCcEEEEeecccccc-cchhhhh--------------ccCCCceEeeccccch-
Confidence            78999999999999999999987 44456776665432211 0111110              1347899999999998 


Q ss_pred             CCCCHHHHHHHhc--CCcEEEEcCcccCchHHH---HHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        117 LGLSEDSEQLIKS--KVNIIFHCAASLRFDEAL---QKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       117 ~~~~~~~~~~~~~--~~d~vi~~aa~~~~~~~~---~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                           ..+...+.  .+|.|+|.|+.+++...+   -+..+.|+.++..|++.++..+++++||||
T Consensus        70 -----~~~~~~~~~~~id~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhv  130 (331)
T KOG0747|consen   70 -----DLVLYLFETEEIDTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHV  130 (331)
T ss_pred             -----HHHHhhhccCchhhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEe
Confidence                 45555554  799999999998765443   245788999999999999999999999996

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.22  E-value=1.7e-10  Score=87.15  Aligned_cols=109  Identities=12%  Similarity=0.148  Sum_probs=78.6

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +.+++++||||+|+||.++++.|.+.|   .+|++++|++...   +.+.....             ...++.++.+|+.
T Consensus         3 ~~~~~vlItGa~g~iG~~~a~~l~~~G---~~V~~~~r~~~~~---~~~~~~~~-------------~~~~~~~~~~Dl~   63 (238)
T PRK05786          3 LKGKKVAIIGVSEGLGYAVAYFALKEG---AQVCINSRNENKL---KRMKKTLS-------------KYGNIHYVVGDVS   63 (238)
T ss_pred             cCCcEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHHH---HHHHHHHH-------------hcCCeEEEECCCC
Confidence            467899999999999999999999999   5899999865211   11211111             1136788999999


Q ss_pred             CCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-----chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-----FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-----~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      +.      +++..++       ..+|.+||+++...     ..+.++..++.|+.+...+++.+.+
T Consensus        64 ~~------~~~~~~~~~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  123 (238)
T PRK05786         64 ST------ESARNVIEKAAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLR  123 (238)
T ss_pred             CH------HHHHHHHHHHHHHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHH
Confidence            97      5555443       35799999998532     1244566789999998888887765

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.22  E-value=3.9e-10  Score=85.31  Aligned_cols=109  Identities=10%  Similarity=0.098  Sum_probs=75.9

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++++++||||+++||.++++.|.+.|   .+|++.+|+..  ..++..++...             ...++..+.+|+.
T Consensus         3 ~~~k~~lVtGas~GIG~aia~~la~~G---~~V~~~~r~~~--~l~~~~~~i~~-------------~~~~~~~~~~D~~   64 (227)
T PRK08862          3 IKSSIILITSAGSVLGRTISCHFARLG---ATLILCDQDQS--ALKDTYEQCSA-------------LTDNVYSFQLKDF   64 (227)
T ss_pred             CCCeEEEEECCccHHHHHHHHHHHHCC---CEEEEEcCCHH--HHHHHHHHHHh-------------cCCCeEEEEccCC
Confidence            468999999999999999999999999   58888888652  11111111111             1245677889999


Q ss_pred             CCCCCCCHHHHHHH-------hc-CCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHH
Q psy17489        114 SEHLGLSEDSEQLI-------KS-KVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAK  166 (177)
Q Consensus       114 ~~~~~~~~~~~~~~-------~~-~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~  166 (177)
                      ++      ++++.+       +. ++|++|||||...        ..+.+.+.+++|+.++..+.+.+.
T Consensus        65 ~~------~~~~~~~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (227)
T PRK08862         65 SQ------ESIRHLFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAA  127 (227)
T ss_pred             CH------HHHHHHHHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence            87      455443       34 6899999997432        124566677889888887766543

>KOG2865|consensus

Probab=99.21  E-value=6.4e-11  Score=90.60  Aligned_cols=116  Identities=18%  Similarity=0.288  Sum_probs=91.8

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      .|-.+-|.||+||+|..++.+|.+.|   .+|++..|.++..-     .++       +    ...+...+-++..|+.|
T Consensus        60 sGiVaTVFGAtGFlGryvvnklak~G---SQviiPyR~d~~~~-----r~l-------k----vmGdLGQvl~~~fd~~D  120 (391)
T KOG2865|consen   60 SGIVATVFGATGFLGRYVVNKLAKMG---SQVIIPYRGDEYDP-----RHL-------K----VMGDLGQVLFMKFDLRD  120 (391)
T ss_pred             cceEEEEecccccccHHHHHHHhhcC---CeEEEeccCCccch-----hhe-------e----ecccccceeeeccCCCC
Confidence            45568999999999999999999999   79999988764321     111       0    11234678899999999


Q ss_pred             CCCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        115 EHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      +      ++++.+++..++|||+.|---..+.+ .+.++|+.++..|++.|++. ++.|||++
T Consensus       121 e------dSIr~vvk~sNVVINLIGrd~eTknf-~f~Dvn~~~aerlAricke~-GVerfIhv  175 (391)
T KOG2865|consen  121 E------DSIRAVVKHSNVVINLIGRDYETKNF-SFEDVNVHIAERLARICKEA-GVERFIHV  175 (391)
T ss_pred             H------HHHHHHHHhCcEEEEeeccccccCCc-ccccccchHHHHHHHHHHhh-Chhheeeh
Confidence            8      89999999999999999852222222 35689999999999999998 99999985

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.21  E-value=9.4e-11  Score=90.46  Aligned_cols=93  Identities=19%  Similarity=0.245  Sum_probs=75.0

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+++|||++|.+|..|++.|. .+   ..|+.++|.+                                    .|++++ 
T Consensus         1 M~iLi~G~~GqLG~~L~~~l~-~~---~~v~a~~~~~------------------------------------~Ditd~-   39 (281)
T COG1091           1 MKILITGANGQLGTELRRALP-GE---FEVIATDRAE------------------------------------LDITDP-   39 (281)
T ss_pred             CcEEEEcCCChHHHHHHHHhC-CC---ceEEeccCcc------------------------------------ccccCh-
Confidence            349999999999999999998 33   4788776631                                    688888 


Q ss_pred             CCCCHHHHHHHhc--CCcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        117 LGLSEDSEQLIKS--KVNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       117 ~~~~~~~~~~~~~--~~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                           +.+..++.  +.|+|||+|+++.+.   ...+..+.+|..++.+++++|++. +. ++||+
T Consensus        40 -----~~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~-ga-~lVhi   98 (281)
T COG1091          40 -----DAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEV-GA-RLVHI   98 (281)
T ss_pred             -----HHHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHh-CC-eEEEe
Confidence                 77888887  579999999998653   345678999999999999999998 44 56653

>KOG0725|consensus

Probab=99.19  E-value=6.8e-10  Score=86.10  Aligned_cols=115  Identities=21%  Similarity=0.249  Sum_probs=82.1

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      ..+.+|+++||||+.+||++++..|.+.|   ++|+..+|+.+..  ++....+..          ......++..+.+|
T Consensus         4 ~~l~gkvalVTG~s~GIG~aia~~la~~G---a~v~i~~r~~~~~--~~~~~~~~~----------~~~~~~~~~~~~~D   68 (270)
T KOG0725|consen    4 GRLAGKVALVTGGSSGIGKAIALLLAKAG---AKVVITGRSEERL--EETAQELGG----------LGYTGGKVLAIVCD   68 (270)
T ss_pred             ccCCCcEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHHH--HHHHHHHHh----------cCCCCCeeEEEECc
Confidence            45789999999999999999999999999   7999999976321  111111111          00113568889999


Q ss_pred             CCCCCCCCCHHHHHHH--------hcCCcEEEEcCcccCc--------hHHHHHHHHHhHHH-HHHHHHHHHh
Q psy17489        112 LESEHLGLSEDSEQLI--------KSKVNIIFHCAASLRF--------DEALQKAIRANLYA-TKQMLNLAKE  167 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~--------~~~~d~vi~~aa~~~~--------~~~~~~~~~~nv~~-~~~ll~~~~~  167 (177)
                      +++.      +..+.+        +.++|+++||||....        .+.|+..+++|+.| ...+.+.+..
T Consensus        69 v~~~------~~~~~l~~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~  135 (270)
T KOG0725|consen   69 VSKE------VDVEKLVEFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARP  135 (270)
T ss_pred             CCCH------HHHHHHHHHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHH
Confidence            9987      333332        4479999999997542        46788899999995 6666665544

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.18  E-value=1.8e-10  Score=87.22  Aligned_cols=100  Identities=24%  Similarity=0.372  Sum_probs=75.6

Q ss_pred             EEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCCC
Q psy17489         39 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLG  118 (177)
Q Consensus        39 vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~  118 (177)
                      |+|+||+|.+|+++++.|++.+   .+|.++.|+...    +...++..               ..++.+.+|+.+.   
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~---~~V~~l~R~~~~----~~~~~l~~---------------~g~~vv~~d~~~~---   55 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAG---FSVRALVRDPSS----DRAQQLQA---------------LGAEVVEADYDDP---   55 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTT---GCEEEEESSSHH----HHHHHHHH---------------TTTEEEES-TT-H---
T ss_pred             CEEECCccHHHHHHHHHHHhCC---CCcEEEEeccch----hhhhhhhc---------------ccceEeecccCCH---
Confidence            7999999999999999999977   689999997621    22222211               4567889999988   


Q ss_pred             CCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCcee
Q psy17489        119 LSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCE  176 (177)
Q Consensus       119 ~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~  176 (177)
                         +.+.++++++|.||.+-+.....         -+....+++++|++. ++++||+
T Consensus        56 ---~~l~~al~g~d~v~~~~~~~~~~---------~~~~~~~li~Aa~~a-gVk~~v~  100 (233)
T PF05368_consen   56 ---ESLVAALKGVDAVFSVTPPSHPS---------ELEQQKNLIDAAKAA-GVKHFVP  100 (233)
T ss_dssp             ---HHHHHHHTTCSEEEEESSCSCCC---------HHHHHHHHHHHHHHH-T-SEEEE
T ss_pred             ---HHHHHHHcCCceEEeecCcchhh---------hhhhhhhHHHhhhcc-ccceEEE
Confidence               89999999999999998864311         123445799999999 8999986

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.17  E-value=2.3e-10  Score=88.25  Aligned_cols=113  Identities=11%  Similarity=0.082  Sum_probs=73.6

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      ++++||||+|+||.++++.|++.|   .+|+++.|+.. ... +.+.+.+..           ....++.++.+|+++..
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G---~~V~~~~~~~~-~~~-~~~~~~l~~-----------~~~~~~~~~~~Dv~d~~   65 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEG---YRVVLHYHRSA-AAA-STLAAELNA-----------RRPNSAVTCQADLSNSA   65 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCC---CeEEEEcCCcH-HHH-HHHHHHHHh-----------ccCCceEEEEccCCCch
Confidence            479999999999999999999999   57887766431 111 111111110           01135667899999973


Q ss_pred             CCCCHHHHHHH-------hcCCcEEEEcCcccCc--------h----------HHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        117 LGLSEDSEQLI-------KSKVNIIFHCAASLRF--------D----------EALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       117 ~~~~~~~~~~~-------~~~~d~vi~~aa~~~~--------~----------~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      .-  .+.++.+       +.++|+||||||....        .          ..+.+.+++|+.++..+.+.+..
T Consensus        66 ~~--~~~~~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~  139 (267)
T TIGR02685        66 TL--FSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQ  139 (267)
T ss_pred             hh--HHHHHHHHHHHHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHH
Confidence            00  0011222       2468999999996421        1          13667899999999999887653

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.17  E-value=5.8e-10  Score=82.33  Aligned_cols=89  Identities=18%  Similarity=0.361  Sum_probs=71.4

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+++||||+|+||.++++.|.+.    .+|+..+|+..                                .+++|+++. 
T Consensus         1 ~~vlItGas~giG~~la~~l~~~----~~vi~~~r~~~--------------------------------~~~~D~~~~-   43 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR----HEVITAGRSSG--------------------------------DVQVDITDP-   43 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc----CcEEEEecCCC--------------------------------ceEecCCCh-
Confidence            47999999999999999999876    47888887531                                357899987 


Q ss_pred             CCCCHHHHHHHhc---CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        117 LGLSEDSEQLIKS---KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       117 ~~~~~~~~~~~~~---~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                           ++++.+++   ++|++||+||....       .+++.+.+++|+.++.++.+.+.+
T Consensus        44 -----~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   99 (199)
T PRK07578         44 -----ASIRALFEKVGKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQH   99 (199)
T ss_pred             -----HHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                 66666655   68999999996431       356777899999999999998765

>KOG1611|consensus

Probab=99.16  E-value=3.4e-10  Score=83.95  Aligned_cols=114  Identities=15%  Similarity=0.195  Sum_probs=77.5

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      .+.++||||+++||..|+++|++. .++..++...|+.+..  .+++....             -..++++.++.|++++
T Consensus         3 pksv~ItGaNRGIGlgLVk~llk~-~~i~~iiat~r~~e~a--~~~l~~k~-------------~~d~rvHii~Ldvt~d   66 (249)
T KOG1611|consen    3 PKSVFITGANRGIGLGLVKELLKD-KGIEVIIATARDPEKA--ATELALKS-------------KSDSRVHIIQLDVTCD   66 (249)
T ss_pred             CccEEEeccCcchhHHHHHHHhcC-CCcEEEEEecCChHHh--hHHHHHhh-------------ccCCceEEEEEecccH
Confidence            467999999999999999999986 4666667766755322  22222211             1347999999999998


Q ss_pred             C-CCCCHHHHHHH--hcCCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHH
Q psy17489        116 H-LGLSEDSEQLI--KSKVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLA  165 (177)
Q Consensus       116 ~-~~~~~~~~~~~--~~~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~  165 (177)
                      . ++..-.+++++  .+++|.+|+|||+..        ....|...+++|+.++..+.+.+
T Consensus        67 eS~~~~~~~V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~  127 (249)
T KOG1611|consen   67 ESIDNFVQEVEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAF  127 (249)
T ss_pred             HHHHHHHHHHHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHH
Confidence            2 21111222223  236799999999742        13456778899999988877653

>PLN00016 RNA-binding protein; Provisional

Probab=99.16  E-value=2.2e-10  Score=92.81  Aligned_cols=110  Identities=18%  Similarity=0.344  Sum_probs=73.6

Q ss_pred             CCCceEEEe----cCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEe
Q psy17489         34 YRDGQILVT----GGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIP  109 (177)
Q Consensus        34 ~~~~~vlVt----G~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  109 (177)
                      ...++|+||    ||+||||+++++.|++.|   ++|++++|+....   ..+...    ....+.+ .  ....++++.
T Consensus        50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G---~~V~~l~R~~~~~---~~~~~~----~~~~~~~-l--~~~~v~~v~  116 (378)
T PLN00016         50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAG---HEVTLFTRGKEPS---QKMKKE----PFSRFSE-L--SSAGVKTVW  116 (378)
T ss_pred             cccceEEEEeccCCCceeEhHHHHHHHHHCC---CEEEEEecCCcch---hhhccC----chhhhhH-h--hhcCceEEE
Confidence            345789999    999999999999999999   5899999976321   111000    0000000 0  013478889


Q ss_pred             CCCCCCCCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        110 SNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       110 ~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      +|+.+.      +.+. ...++|+|||+++.             ++.++.+++++|++. +++||||+
T Consensus       117 ~D~~d~------~~~~-~~~~~d~Vi~~~~~-------------~~~~~~~ll~aa~~~-gvkr~V~~  163 (378)
T PLN00016        117 GDPADV------KSKV-AGAGFDVVYDNNGK-------------DLDEVEPVADWAKSP-GLKQFLFC  163 (378)
T ss_pred             ecHHHH------Hhhh-ccCCccEEEeCCCC-------------CHHHHHHHHHHHHHc-CCCEEEEE
Confidence            988763      2221 12478999999763             134567899999998 89999984

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.15  E-value=7.9e-10  Score=84.78  Aligned_cols=108  Identities=15%  Similarity=0.175  Sum_probs=74.2

Q ss_pred             eEEEecCCcchHHHHHHHHHh----hCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         38 QILVTGGTGFMGKLLIDKLLR----SFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        38 ~vlVtG~~G~iG~~l~~~L~~----~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      .++||||+++||.+++++|++    .|   .+|+.++|+...  . +.+.+.+.        ..  ....++.++.+|++
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g---~~V~~~~r~~~~--~-~~~~~~l~--------~~--~~~~~v~~~~~Dl~   65 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPG---SVLVLSARNDEA--L-RQLKAEIG--------AE--RSGLRVVRVSLDLG   65 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCC---cEEEEEEcCHHH--H-HHHHHHHH--------hc--CCCceEEEEEeccC
Confidence            589999999999999999997    57   588888886521  1 11111111        00  01236788999999


Q ss_pred             CCCCCCCHHHHHHHhcC-----------CcEEEEcCcccCc----------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        114 SEHLGLSEDSEQLIKSK-----------VNIIFHCAASLRF----------DEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~~-----------~d~vi~~aa~~~~----------~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      +.      +++..+++.           .+++|||||....          .+.++..+++|+.++..+.+.+.+
T Consensus        66 ~~------~~v~~~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~  134 (256)
T TIGR01500        66 AE------AGLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLK  134 (256)
T ss_pred             CH------HHHHHHHHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHH
Confidence            98      556554431           2589999996321          245677899999999888877644

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PLN00015 protochlorophyllide reductase

Probab=99.15  E-value=1e-09  Score=86.63  Aligned_cols=115  Identities=16%  Similarity=0.137  Sum_probs=78.6

Q ss_pred             EEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCCCC
Q psy17489         40 LVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLGL  119 (177)
Q Consensus        40 lVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~  119 (177)
                      +||||+++||.++++.|++.|.  ++|++.+|+..      ........     +    .....++.++.+|+.+.    
T Consensus         1 lITGas~GIG~aia~~l~~~G~--~~V~~~~r~~~------~~~~~~~~-----l----~~~~~~~~~~~~Dl~d~----   59 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGK--WHVVMACRDFL------KAERAAKS-----A----GMPKDSYTVMHLDLASL----   59 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCC--CEEEEEeCCHH------HHHHHHHH-----h----cCCCCeEEEEEecCCCH----
Confidence            5999999999999999999982  37888887642      11111110     0    00124678889999998    


Q ss_pred             CHHHHHHHh-------cCCcEEEEcCcccCc--------hHHHHHHHHHhHHHHHHHHHHHHhc---CC--CCCceeC
Q psy17489        120 SEDSEQLIK-------SKVNIIFHCAASLRF--------DEALQKAIRANLYATKQMLNLAKEC---VN--LKRFCEL  177 (177)
Q Consensus       120 ~~~~~~~~~-------~~~d~vi~~aa~~~~--------~~~~~~~~~~nv~~~~~ll~~~~~~---~~--~~~~v~v  177 (177)
                        ++++.++       .++|++|||||....        .+.++..+++|+.++..+++.+...   .+  ..++|+|
T Consensus        60 --~~v~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~v  135 (308)
T PLN00015         60 --DSVRQFVDNFRRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIV  135 (308)
T ss_pred             --HHHHHHHHHHHhcCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEE
Confidence              5555543       358999999997421        3567788999999998887765432   12  3577764

>KOG1200|consensus

Probab=99.12  E-value=3.9e-10  Score=81.93  Aligned_cols=118  Identities=14%  Similarity=0.187  Sum_probs=84.8

Q ss_pred             cccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489         31 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS  110 (177)
Q Consensus        31 ~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  110 (177)
                      .+++..+.++||||+++||+++++.|.+.|   ++|.+.+++..  .+++...++             +.. .+-..+.+
T Consensus         9 ~~r~~sk~~~vtGg~sGIGrAia~~la~~G---arv~v~dl~~~--~A~ata~~L-------------~g~-~~h~aF~~   69 (256)
T KOG1200|consen    9 VQRLMSKVAAVTGGSSGIGRAIAQLLAKKG---ARVAVADLDSA--AAEATAGDL-------------GGY-GDHSAFSC   69 (256)
T ss_pred             HHHHhcceeEEecCCchHHHHHHHHHHhcC---cEEEEeecchh--hHHHHHhhc-------------CCC-Cccceeee
Confidence            345677899999999999999999999999   68888887653  222222221             111 24556789


Q ss_pred             CCCCCC-CCCCHHHHHHHhcCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        111 NLESEH-LGLSEDSEQLIKSKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       111 D~~~~~-~~~~~~~~~~~~~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      |+++.. .....+.+.+-+..+++++||||++.       ..++|+..+.+|+.+.+...+++.+
T Consensus        70 DVS~a~~v~~~l~e~~k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r  134 (256)
T KOG1200|consen   70 DVSKAHDVQNTLEEMEKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVR  134 (256)
T ss_pred             ccCcHHHHHHHHHHHHHhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHH
Confidence            999973 11112233333447899999999975       2578999999999999999887755

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.12  E-value=2.1e-10  Score=87.68  Aligned_cols=113  Identities=16%  Similarity=0.167  Sum_probs=85.8

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +|++||||-+|.-|+.|++.|++.|   ..|+.+.|+...... .++ +++...+.         ...++.++.+|++|.
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekG---Y~VhGi~Rrss~~n~-~ri-~L~~~~~~---------~~~~l~l~~gDLtD~   67 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKG---YEVHGIKRRSSSFNT-PRI-HLYEDPHL---------NDPRLHLHYGDLTDS   67 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcC---cEEEEEeeccccCCc-ccc-eecccccc---------CCceeEEEeccccch
Confidence            6899999999999999999999999   588999887533222 222 33322111         235688999999998


Q ss_pred             CCCCCHHHHHHHhc--CCcEEEEcCcccCchHHHH---HHHHHhHHHHHHHHHHHHhc
Q psy17489        116 HLGLSEDSEQLIKS--KVNIIFHCAASLRFDEALQ---KAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       116 ~~~~~~~~~~~~~~--~~d~vi~~aa~~~~~~~~~---~~~~~nv~~~~~ll~~~~~~  168 (177)
                            ..+.++++  +.|-|+|+||+..+..+++   ...+++..|+.+|+++.+..
T Consensus        68 ------~~l~r~l~~v~PdEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~  119 (345)
T COG1089          68 ------SNLLRILEEVQPDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRIL  119 (345)
T ss_pred             ------HHHHHHHHhcCchhheeccccccccccccCcceeeeechhHHHHHHHHHHHh
Confidence                  67777776  5799999999876544443   45688899999999999986

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.11  E-value=2.6e-09  Score=84.19  Aligned_cols=127  Identities=17%  Similarity=0.121  Sum_probs=76.0

Q ss_pred             CCCceEEEecC--CcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcc-cCCCeEEEeC
Q psy17489         34 YRDGQILVTGG--TGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPD-FRSKIQVIPS  110 (177)
Q Consensus        34 ~~~~~vlVtG~--~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~  110 (177)
                      ++||+++||||  +++||.++++.|.+.|   .+|++ +|+....   +.+........++.+..+... .......+.+
T Consensus         7 l~gk~alITGa~~s~GIG~a~A~~la~~G---a~Vv~-~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (303)
T PLN02730          7 LRGKRAFIAGVADDNGYGWAIAKALAAAG---AEILV-GTWVPAL---NIFETSLRRGKFDESRKLPDGSLMEITKVYPL   79 (303)
T ss_pred             CCCCEEEEeCCCCCCcHHHHHHHHHHHCC---CEEEE-EeCcchh---hHHHHhhhccccchhhhcccccccCcCeeeec
Confidence            78999999999  7999999999999999   68877 6643221   222211111011111000000 0012356778


Q ss_pred             CC--CCCC-CCC-----------CHHHHHHH-------hcCCcEEEEcCcccC---------chHHHHHHHHHhHHHHHH
Q psy17489        111 NL--ESEH-LGL-----------SEDSEQLI-------KSKVNIIFHCAASLR---------FDEALQKAIRANLYATKQ  160 (177)
Q Consensus       111 D~--~~~~-~~~-----------~~~~~~~~-------~~~~d~vi~~aa~~~---------~~~~~~~~~~~nv~~~~~  160 (177)
                      |+  .+.. +..           ..++++.+       +.++|++|||||...         ..++|+..+++|+.++..
T Consensus        80 D~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~  159 (303)
T PLN02730         80 DAVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVS  159 (303)
T ss_pred             ceecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHH
Confidence            88  3221 000           00133333       336899999996421         136788899999999999


Q ss_pred             HHHHHHh
Q psy17489        161 MLNLAKE  167 (177)
Q Consensus       161 ll~~~~~  167 (177)
                      +.+.+..
T Consensus       160 l~~~~~p  166 (303)
T PLN02730        160 LLQHFGP  166 (303)
T ss_pred             HHHHHHH
Confidence            9888765

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.11  E-value=6.5e-10  Score=106.45  Aligned_cols=135  Identities=14%  Similarity=0.084  Sum_probs=90.0

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCC--------hHHHHHHHHhhh----------------
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSS--------PEERVKNMLNSV----------------   89 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~--------~~~~~~~~~~~~----------------   89 (177)
                      ..+++++||||+++||..+++.|.+.|-  ++|++++|+.....        -+..++......                
T Consensus      1995 ~~g~vvLVTGGarGIG~aiA~~LA~~~g--a~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~ 2072 (2582)
T TIGR02813      1995 NSDDVFLVTGGAKGVTFECALELAKQCQ--AHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDAL 2072 (2582)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHhcC--CEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhc
Confidence            4688999999999999999999998731  68999998731000        001111100000                


Q ss_pred             --------hhhcccccCcccCCCeEEEeCCCCCCCCCCCHHHHHHHhc------CCcEEEEcCcccC-------chHHHH
Q psy17489         90 --------IFDRLNKEVPDFRSKIQVIPSNLESEHLGLSEDSEQLIKS------KVNIIFHCAASLR-------FDEALQ  148 (177)
Q Consensus        90 --------~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~------~~d~vi~~aa~~~-------~~~~~~  148 (177)
                              -......+......++.++.+|++|.      +.+..+++      ++|+|||+||...       ..+.|+
T Consensus      2073 ~~~~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~------~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~ 2146 (2582)
T TIGR02813      2073 VRPVLSSLEIAQALAAFKAAGASAEYASADVTNS------VSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFN 2146 (2582)
T ss_pred             ccccchhHHHHHHHHHHHhcCCcEEEEEccCCCH------HHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHH
Confidence                    00000000111245688999999998      56655543      5899999999753       246788


Q ss_pred             HHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        149 KAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       149 ~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      ..+++|+.|+.++++++... ..++||++
T Consensus      2147 ~v~~~nv~G~~~Ll~al~~~-~~~~IV~~ 2174 (2582)
T TIGR02813      2147 AVYGTKVDGLLSLLAALNAE-NIKLLALF 2174 (2582)
T ss_pred             HHHHHHHHHHHHHHHHHHHh-CCCeEEEE
Confidence            89999999999999999876 56677753

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK05599 hypothetical protein; Provisional

Probab=99.09  E-value=3.1e-09  Score=81.18  Aligned_cols=105  Identities=13%  Similarity=0.159  Sum_probs=70.2

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+++||||+++||.++++.|.+ |   .+|++.+|+++.  .++ +.+.+..           ....++.++.+|+.+. 
T Consensus         1 ~~vlItGas~GIG~aia~~l~~-g---~~Vil~~r~~~~--~~~-~~~~l~~-----------~~~~~~~~~~~Dv~d~-   61 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLCH-G---EDVVLAARRPEA--AQG-LASDLRQ-----------RGATSVHVLSFDAQDL-   61 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHhC-C---CEEEEEeCCHHH--HHH-HHHHHHh-----------ccCCceEEEEcccCCH-
Confidence            5799999999999999999984 7   688988886521  111 1111110           0112477899999998 


Q ss_pred             CCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHH
Q psy17489        117 LGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLA  165 (177)
Q Consensus       117 ~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~  165 (177)
                           ++++.++       +++|++|||||....       ...+.+.+.+|+.+...+++.+
T Consensus        62 -----~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~  119 (246)
T PRK05599         62 -----DTHRELVKQTQELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVL  119 (246)
T ss_pred             -----HHHHHHHHHHHHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHH
Confidence                 4444432       468999999997532       1223456778888887666554

>KOG1207|consensus

Probab=99.07  E-value=2e-10  Score=82.13  Aligned_cols=110  Identities=15%  Similarity=0.167  Sum_probs=85.0

Q ss_pred             cccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489         31 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS  110 (177)
Q Consensus        31 ~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  110 (177)
                      +..++|+.+++||+..+||+.+++.|.+.|   .+|++++|++      +.+..+.+.            +..-+..+.+
T Consensus         2 ~t~laG~~vlvTgagaGIG~~~v~~La~aG---A~ViAvaR~~------a~L~sLV~e------------~p~~I~Pi~~   60 (245)
T KOG1207|consen    2 KTSLAGVIVLVTGAGAGIGKEIVLSLAKAG---AQVIAVARNE------ANLLSLVKE------------TPSLIIPIVG   60 (245)
T ss_pred             cccccceEEEeecccccccHHHHHHHHhcC---CEEEEEecCH------HHHHHHHhh------------CCcceeeeEe
Confidence            445789999999999999999999999999   7999999976      333333321            2344788999


Q ss_pred             CCCCCCCCCCHHHHHHHhc---CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        111 NLESEHLGLSEDSEQLIKS---KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       111 D~~~~~~~~~~~~~~~~~~---~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      |+...      +.+.+.+.   .+|.++||||..-.       .++++..|++|+.+..++.+...+
T Consensus        61 Dls~w------ea~~~~l~~v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var  121 (245)
T KOG1207|consen   61 DLSAW------EALFKLLVPVFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVAR  121 (245)
T ss_pred             cccHH------HHHHHhhcccCchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHH
Confidence            99885      66666654   47999999997531       356677789999999998887544

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.06  E-value=6.5e-09  Score=79.19  Aligned_cols=113  Identities=16%  Similarity=0.251  Sum_probs=78.9

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccC-CCeEEEeCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFR-SKIQVIPSN  111 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~D  111 (177)
                      .+.+++++||||+++||..+++.|.+.|   ..|++..++.... ..+.+......            .. ..+.+..+|
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G---~~v~~~~~~~~~~-~~~~~~~~~~~------------~~~~~~~~~~~D   65 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREG---ARVVVAARRSEEE-AAEALAAAIKE------------AGGGRAAAVAAD   65 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCC---CeEEEEcCCCchh-hHHHHHHHHHh------------cCCCcEEEEEec
Confidence            3568999999999999999999999998   5777777765321 11222211110            01 357778899


Q ss_pred             CCC-CCCCCCHHHHHHH-------hcCCcEEEEcCcccC----c----hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        112 LES-EHLGLSEDSEQLI-------KSKVNIIFHCAASLR----F----DEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       112 ~~~-~~~~~~~~~~~~~-------~~~~d~vi~~aa~~~----~----~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      +++ .      +.+..+       +.++|++|||||...    .    .+.++..+++|+.+...+.+.+..
T Consensus        66 vs~~~------~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~  131 (251)
T COG1028          66 VSDDE------ESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALP  131 (251)
T ss_pred             CCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            997 5      344433       335899999999743    1    367788999999999999885544

>KOG1610|consensus

Probab=98.98  E-value=1.3e-08  Score=79.11  Aligned_cols=118  Identities=17%  Similarity=0.197  Sum_probs=84.9

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      ..+|.|+|||+..+.|..++++|.+.|   -.|++-...+.+.   +.+..            +..  .++...++.|++
T Consensus        27 ~~~k~VlITGCDSGfG~~LA~~L~~~G---f~V~Agcl~~~ga---e~L~~------------~~~--s~rl~t~~LDVT   86 (322)
T KOG1610|consen   27 LSDKAVLITGCDSGFGRLLAKKLDKKG---FRVFAGCLTEEGA---ESLRG------------ETK--SPRLRTLQLDVT   86 (322)
T ss_pred             cCCcEEEEecCCcHHHHHHHHHHHhcC---CEEEEEeecCchH---HHHhh------------hhc--CCcceeEeeccC
Confidence            457889999999999999999999999   4788777544321   22221            111  367888899999


Q ss_pred             CCCCCCCHHHHHHHhc---------CCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHhc--CCCCCc
Q psy17489        114 SEHLGLSEDSEQLIKS---------KVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKEC--VNLKRF  174 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~---------~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~  174 (177)
                      ++      ++++++.+         +...||||||+..        ..+++...+++|+.|+.++.+.....  +.-.|+
T Consensus        87 ~~------esi~~a~~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRv  160 (322)
T KOG1610|consen   87 KP------ESVKEAAQWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRV  160 (322)
T ss_pred             CH------HHHHHHHHHHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeE
Confidence            99      67777643         4689999999653        24677788999999988887765321  133466


Q ss_pred             eeC
Q psy17489        175 CEL  177 (177)
Q Consensus       175 v~v  177 (177)
                      |+|
T Consensus       161 Vnv  163 (322)
T KOG1610|consen  161 VNV  163 (322)
T ss_pred             EEe
Confidence            654

>PRK06720 hypothetical protein; Provisional

Probab=98.94  E-value=1.9e-08  Score=72.82  Aligned_cols=85  Identities=16%  Similarity=0.239  Sum_probs=60.6

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      ++++.++||||+++||..++..|.+.|   .+|++.+|+...  ..+...+...             ...+..++.+|++
T Consensus        14 l~gk~~lVTGa~~GIG~aia~~l~~~G---~~V~l~~r~~~~--~~~~~~~l~~-------------~~~~~~~~~~Dl~   75 (169)
T PRK06720         14 LAGKVAIVTGGGIGIGRNTALLLAKQG---AKVIVTDIDQES--GQATVEEITN-------------LGGEALFVSYDME   75 (169)
T ss_pred             cCCCEEEEecCCChHHHHHHHHHHHCC---CEEEEEECCHHH--HHHHHHHHHh-------------cCCcEEEEEccCC
Confidence            578999999999999999999999998   689888876421  1111111100             1245677899999


Q ss_pred             CCCCCCCHHHHHHH-------hcCCcEEEEcCcccC
Q psy17489        114 SEHLGLSEDSEQLI-------KSKVNIIFHCAASLR  142 (177)
Q Consensus       114 ~~~~~~~~~~~~~~-------~~~~d~vi~~aa~~~  142 (177)
                      +.      +++..+       +.++|++|||||...
T Consensus        76 ~~------~~v~~~v~~~~~~~G~iDilVnnAG~~~  105 (169)
T PRK06720         76 KQ------GDWQRVISITLNAFSRIDMLFQNAGLYK  105 (169)
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCcCC
Confidence            87      444443       347999999999753

>KOG1209|consensus

Probab=98.86  E-value=1.9e-08  Score=74.33  Aligned_cols=104  Identities=13%  Similarity=0.241  Sum_probs=76.7

Q ss_pred             CCceEEEecCC-cchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         35 RDGQILVTGGT-GFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        35 ~~~~vlVtG~~-G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      ..+.|+||||+ |+||.++++.+.+.|   +.|++.+|+.+.      ..++..+              .++.....|++
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G---~~V~AtaR~~e~------M~~L~~~--------------~gl~~~kLDV~   62 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNG---YLVYATARRLEP------MAQLAIQ--------------FGLKPYKLDVS   62 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCC---eEEEEEccccch------HhhHHHh--------------hCCeeEEeccC
Confidence            45789999876 589999999999999   699999997632      2232211              35778899999


Q ss_pred             CCCCCCCHHHHHHHh--------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        114 SEHLGLSEDSEQLIK--------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~--------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      ++      +++....        +..|+++||||..=       ...+.++.+++|+.|..+..++...
T Consensus        63 ~~------~~V~~v~~evr~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h  125 (289)
T KOG1209|consen   63 KP------EEVVTVSGEVRANPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSH  125 (289)
T ss_pred             Ch------HHHHHHHHHHhhCCCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHH
Confidence            98      4555442        24799999999631       1345667899999998888777653

>PTZ00325 malate dehydrogenase; Provisional

Probab=98.83  E-value=5.9e-08  Score=76.92  Aligned_cols=118  Identities=9%  Similarity=0.079  Sum_probs=82.9

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      ..++++|.|+|+.|.+|+.++..|...+. ...+..+++...... ...+.+                ....  ....+.
T Consensus         5 ~~~~~KI~IiGaaG~VGs~~a~~l~~~~~-~~elvL~Di~~~~g~-a~Dl~~----------------~~~~--~~v~~~   64 (321)
T PTZ00325          5 ALKMFKVAVLGAAGGIGQPLSLLLKQNPH-VSELSLYDIVGAPGV-AADLSH----------------IDTP--AKVTGY   64 (321)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHhcCCC-CCEEEEEecCCCccc-ccchhh----------------cCcC--ceEEEe
Confidence            45678999999999999999999986653 468888888321110 011111                1111  222344


Q ss_pred             CCCCCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        113 ESEHLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      +++      .++...++++|+||++||.... .+++.+.+..|+..+.++++.++++ +++++|++
T Consensus        65 td~------~~~~~~l~gaDvVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~-~~~~iviv  123 (321)
T PTZ00325         65 ADG------ELWEKALRGADLVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASS-APKAIVGI  123 (321)
T ss_pred             cCC------CchHHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEE
Confidence            443      2335677899999999998543 3567788999999999999999999 99998874

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.81  E-value=6.1e-08  Score=74.55  Aligned_cols=104  Identities=20%  Similarity=0.227  Sum_probs=74.6

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      +.++||||||++|.++++.|++.|   +.|++..|++...      ...               . ..+.+..+|+.+. 
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~---~~v~~~~r~~~~~------~~~---------------~-~~v~~~~~d~~~~-   54 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARG---HEVRAAVRNPEAA------AAL---------------A-GGVEVVLGDLRDP-   54 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCC---CEEEEEEeCHHHH------Hhh---------------c-CCcEEEEeccCCH-
Confidence            479999999999999999999998   6999999986321      111               1 4688999999998 


Q ss_pred             CCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCcee
Q psy17489        117 LGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCE  176 (177)
Q Consensus       117 ~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~  176 (177)
                           ..+...+++++.++++.+... ...  ........+..+..+.+. . +++++++
T Consensus        55 -----~~l~~a~~G~~~~~~i~~~~~-~~~--~~~~~~~~~~~~~a~~a~-~-~~~~~~~  104 (275)
T COG0702          55 -----KSLVAGAKGVDGVLLISGLLD-GSD--AFRAVQVTAVVRAAEAAG-A-GVKHGVS  104 (275)
T ss_pred             -----hHHHHHhccccEEEEEecccc-ccc--chhHHHHHHHHHHHHHhc-C-CceEEEE
Confidence                 788999999999999988654 222  122333444445554444 2 4445543

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=98.80  E-value=5.8e-08  Score=74.26  Aligned_cols=93  Identities=17%  Similarity=0.323  Sum_probs=64.2

Q ss_pred             EEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCCC
Q psy17489         39 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLG  118 (177)
Q Consensus        39 vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~  118 (177)
                      |+||||||+||++|+..|.+.|   ++|+++.|++...+..                     ....+..  .        
T Consensus         1 IliTGgTGlIG~~L~~~L~~~g---h~v~iltR~~~~~~~~---------------------~~~~v~~--~--------   46 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGG---HQVTILTRRPPKASQN---------------------LHPNVTL--W--------   46 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCC---CeEEEEEcCCcchhhh---------------------cCccccc--c--------
Confidence            5899999999999999999999   6999999987432100                     0011111  1        


Q ss_pred             CCHHHHHHHhc-CCcEEEEcCcccCc-----hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        119 LSEDSEQLIKS-KVNIIFHCAASLRF-----DEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       119 ~~~~~~~~~~~-~~d~vi~~aa~~~~-----~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                         +.+..... ++|+|||+||..=.     .+..+.+++.-+..|..|.++..+.
T Consensus        47 ---~~~~~~~~~~~DavINLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~   99 (297)
T COG1090          47 ---EGLADALTLGIDAVINLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAAS   99 (297)
T ss_pred             ---chhhhcccCCCCEEEECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhc
Confidence               22333334 79999999996421     2334457788899999999987754

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.80  E-value=1e-07  Score=75.10  Aligned_cols=130  Identities=11%  Similarity=0.018  Sum_probs=71.1

Q ss_pred             cCCCceEEEecCC--cchHHHHHHHHHhhCCCcCeEEEEEeCCCC------CChHHHHHHH-Hhhhhh----hcccccCc
Q psy17489         33 FYRDGQILVTGGT--GFMGKLLIDKLLRSFPDIGAIYIMVRDKKG------SSPEERVKNM-LNSVIF----DRLNKEVP   99 (177)
Q Consensus        33 ~~~~~~vlVtG~~--G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~------~~~~~~~~~~-~~~~~~----~~~~~~~~   99 (177)
                      .++||+++|||++  .+||.++++.|.++|   ++|++.++.+..      ... .+.... ......    .++.. ..
T Consensus         5 ~~~gk~alITGa~~~~GIG~a~A~~la~~G---a~Vvv~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~-~~   79 (299)
T PRK06300          5 DLTGKIAFIAGIGDDQGYGWGIAKALAEAG---ATILVGTWVPIYKIFSQSLEL-GKFDASRKLSNGSLLTFAKIYP-MD   79 (299)
T ss_pred             CCCCCEEEEeCCCCCCCHHHHHHHHHHHCC---CEEEEEeccchhhhhhhhccc-ccccccccccccchhhhhhHHH-hh
Confidence            4579999999995  899999999999999   688876543100      000 000000 000000    00000 00


Q ss_pred             ccCCCeEEEeCCCCCCC-C-CCCHHHHHHH-------hcCCcEEEEcCcccC---------chHHHHHHHHHhHHHHHHH
Q psy17489        100 DFRSKIQVIPSNLESEH-L-GLSEDSEQLI-------KSKVNIIFHCAASLR---------FDEALQKAIRANLYATKQM  161 (177)
Q Consensus       100 ~~~~~v~~~~~D~~~~~-~-~~~~~~~~~~-------~~~~d~vi~~aa~~~---------~~~~~~~~~~~nv~~~~~l  161 (177)
                      .+.....-+..|+.+.. + +...+++..+       +.++|++|||||...         ..++|+..+++|+.++.++
T Consensus        80 ~d~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l  159 (299)
T PRK06300         80 ASFDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSL  159 (299)
T ss_pred             hhcCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHH
Confidence            00112222333333321 0 0111223332       346899999997531         1367888999999999999


Q ss_pred             HHHHHh
Q psy17489        162 LNLAKE  167 (177)
Q Consensus       162 l~~~~~  167 (177)
                      .+++..
T Consensus       160 ~~a~~p  165 (299)
T PRK06300        160 LSHFGP  165 (299)
T ss_pred             HHHHHH
Confidence            988765

>KOG1199|consensus

Probab=98.75  E-value=1.7e-08  Score=72.31  Aligned_cols=107  Identities=20%  Similarity=0.287  Sum_probs=80.8

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      +.+|-..+||||.+++|...++.|.++|   ..|+.++......   ..+.+.               ...++.|.+.|+
T Consensus         6 s~kglvalvtggasglg~ataerlakqg---asv~lldlp~skg---~~vake---------------lg~~~vf~padv   64 (260)
T KOG1199|consen    6 STKGLVALVTGGASGLGKATAERLAKQG---ASVALLDLPQSKG---ADVAKE---------------LGGKVVFTPADV   64 (260)
T ss_pred             hhcCeeEEeecCcccccHHHHHHHHhcC---ceEEEEeCCcccc---hHHHHH---------------hCCceEEecccc
Confidence            4567889999999999999999999999   7888887644221   222221               236899999999


Q ss_pred             CCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------------chHHHHHHHHHhHHHHHHHHHHHH
Q psy17489        113 ESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------------FDEALQKAIRANLYATKQMLNLAK  166 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------------~~~~~~~~~~~nv~~~~~ll~~~~  166 (177)
                      +++      .+.+.++       .+.|..+||||+.-             .-++++..+++|+.+++|+++...
T Consensus        65 tse------kdv~aala~ak~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~a  132 (260)
T KOG1199|consen   65 TSE------KDVRAALAKAKAKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGA  132 (260)
T ss_pred             CcH------HHHHHHHHHHHhhccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehh
Confidence            987      5555543       47899999999741             136677788999999999988643

>KOG4039|consensus

Probab=98.75  E-value=3.3e-08  Score=71.00  Aligned_cols=115  Identities=15%  Similarity=0.177  Sum_probs=90.4

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+.++..+|.||+|-.|..+++.+.+.+ ...+|+++.|++...                      +.....+.....|+
T Consensus        15 ~mq~~s~fvlGAtG~~G~~llk~~~E~~-~FSKV~~i~RR~~~d----------------------~at~k~v~q~~vDf   71 (238)
T KOG4039|consen   15 RMQNMSGFVLGATGLCGGGLLKHAQEAP-QFSKVYAILRRELPD----------------------PATDKVVAQVEVDF   71 (238)
T ss_pred             hhhccceEEEeccccccHHHHHHHHhcc-cceeEEEEEeccCCC----------------------ccccceeeeEEech
Confidence            3567899999999999999999999985 678999999985322                      11224566677787


Q ss_pred             CCCCCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        113 ESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      ...      +++...+.+.|+.+++-|-+.-....+..+++.-+....+.++|+.. ++++||.|
T Consensus        72 ~Kl------~~~a~~~qg~dV~FcaLgTTRgkaGadgfykvDhDyvl~~A~~AKe~-Gck~fvLv  129 (238)
T KOG4039|consen   72 SKL------SQLATNEQGPDVLFCALGTTRGKAGADGFYKVDHDYVLQLAQAAKEK-GCKTFVLV  129 (238)
T ss_pred             HHH------HHHHhhhcCCceEEEeecccccccccCceEeechHHHHHHHHHHHhC-CCeEEEEE
Confidence            776      67777788999999999976544344556788888888999999998 99999875

>KOG1210|consensus

Probab=98.74  E-value=1.3e-07  Score=73.60  Aligned_cols=109  Identities=19%  Similarity=0.231  Sum_probs=78.6

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      ++++||||+.++|..++..+...|   +.|.++.|+..      ++.+..+.  ++-     ......+.+..+|+.++ 
T Consensus        34 ~hi~itggS~glgl~la~e~~~~g---a~Vti~ar~~~------kl~~a~~~--l~l-----~~~~~~v~~~S~d~~~Y-   96 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREG---ADVTITARSGK------KLLEAKAE--LEL-----LTQVEDVSYKSVDVIDY-   96 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHcc---CceEEEeccHH------HHHHHHhh--hhh-----hhccceeeEeccccccH-
Confidence            699999999999999999999999   68999998762      22222111  000     00123477889999777 


Q ss_pred             CCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        117 LGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       117 ~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                           ++...+++       .+|.+|||||..-       ..+..+..+++|..++.+.++++..
T Consensus        97 -----~~v~~~~~~l~~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~  156 (331)
T KOG1210|consen   97 -----DSVSKVIEELRDLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAAR  156 (331)
T ss_pred             -----HHHHHHHhhhhhccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHH
Confidence                 56655544       4799999999631       2355667899999999999887654

>PRK08309 short chain dehydrogenase; Provisional

Probab=98.72  E-value=1.3e-07  Score=69.00  Aligned_cols=99  Identities=16%  Similarity=0.219  Sum_probs=67.6

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+++||||+|++|. +++.|.+.|   ++|++.+|++.      ...++...     +    + ...++.++.+|+.|. 
T Consensus         1 m~vlVtGGtG~gg~-la~~L~~~G---~~V~v~~R~~~------~~~~l~~~-----l----~-~~~~i~~~~~Dv~d~-   59 (177)
T PRK08309          1 MHALVIGGTGMLKR-VSLWLCEKG---FHVSVIARREV------KLENVKRE-----S----T-TPESITPLPLDYHDD-   59 (177)
T ss_pred             CEEEEECcCHHHHH-HHHHHHHCc---CEEEEEECCHH------HHHHHHHH-----h----h-cCCcEEEEEccCCCH-
Confidence            57999999988775 999999999   58888887642      22221110     0    0 124678889999998 


Q ss_pred             CCCCHHHHHHHhc-------CCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCC----CceeC
Q psy17489        117 LGLSEDSEQLIKS-------KVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLK----RFCEL  177 (177)
Q Consensus       117 ~~~~~~~~~~~~~-------~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~----~~v~v  177 (177)
                           +++..+++       ++|.+|+..-               +.++.++..+|++. +++    +|+++
T Consensus        60 -----~sv~~~i~~~l~~~g~id~lv~~vh---------------~~~~~~~~~~~~~~-gv~~~~~~~~h~  110 (177)
T PRK08309         60 -----DALKLAIKSTIEKNGPFDLAVAWIH---------------SSAKDALSVVCREL-DGSSETYRLFHV  110 (177)
T ss_pred             -----HHHHHHHHHHHHHcCCCeEEEEecc---------------ccchhhHHHHHHHH-ccCCCCceEEEE
Confidence                 56666554       3566665533               34566788888888 777    88875

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.71  E-value=1.9e-07  Score=67.39  Aligned_cols=103  Identities=12%  Similarity=0.153  Sum_probs=77.3

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+|.|+||+|.+|++|++...++|   +.|.+++|++...      .                 ..+.+..++.|+.++ 
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RG---HeVTAivRn~~K~------~-----------------~~~~~~i~q~Difd~-   53 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRG---HEVTAIVRNASKL------A-----------------ARQGVTILQKDIFDL-   53 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCC---CeeEEEEeChHhc------c-----------------ccccceeecccccCh-
Confidence            689999999999999999999999   6899999987321      1                 114677899999998 


Q ss_pred             CCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        117 LGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       117 ~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                           ..+.+.+.+.|+||..-+.......     .........+++.++.. ++.|++.|
T Consensus        54 -----~~~a~~l~g~DaVIsA~~~~~~~~~-----~~~~k~~~~li~~l~~a-gv~RllVV  103 (211)
T COG2910          54 -----TSLASDLAGHDAVISAFGAGASDND-----ELHSKSIEALIEALKGA-GVPRLLVV  103 (211)
T ss_pred             -----hhhHhhhcCCceEEEeccCCCCChh-----HHHHHHHHHHHHHHhhc-CCeeEEEE
Confidence                 6778888999999998776421111     11123366677888887 77787654

>PLN00106 malate dehydrogenase

Probab=98.70  E-value=1.7e-07  Score=74.38  Aligned_cols=115  Identities=10%  Similarity=0.034  Sum_probs=81.1

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      .++|.|+|++|.+|..++..|...+. +..+.++++.+ .......+.+                .....  ...++.+.
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~-~~el~L~Di~~-~~g~a~Dl~~----------------~~~~~--~i~~~~~~   77 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPL-VSELHLYDIAN-TPGVAADVSH----------------INTPA--QVRGFLGD   77 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCC-CCEEEEEecCC-CCeeEchhhh----------------CCcCc--eEEEEeCC
Confidence            36899999999999999999987653 35788888865 1110011111                11111  12233222


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                            +++...++++|+||++||.... ..++.+.++.|+..+.++.+.++++ +.+++|++
T Consensus        78 ------~d~~~~l~~aDiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~-~p~aiviv  133 (323)
T PLN00106         78 ------DQLGDALKGADLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKH-CPNALVNI  133 (323)
T ss_pred             ------CCHHHHcCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEE
Confidence                  3466778999999999998543 4578889999999999999999998 77877763

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=98.67  E-value=2.5e-07  Score=70.27  Aligned_cols=100  Identities=15%  Similarity=0.246  Sum_probs=73.3

Q ss_pred             cCC--cchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCCCCC
Q psy17489         43 GGT--GFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLGLS  120 (177)
Q Consensus        43 G~~--G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~  120 (177)
                      |++  ++||.++++.|++.|   ++|++.+|+...  ..+.+.++..+              ....++.+|++++     
T Consensus         1 g~~~s~GiG~aia~~l~~~G---a~V~~~~~~~~~--~~~~~~~l~~~--------------~~~~~~~~D~~~~-----   56 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEG---ANVILTDRNEEK--LADALEELAKE--------------YGAEVIQCDLSDE-----   56 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTT---EEEEEEESSHHH--HHHHHHHHHHH--------------TTSEEEESCTTSH-----
T ss_pred             CCCCCCChHHHHHHHHHHCC---CEEEEEeCChHH--HHHHHHHHHHH--------------cCCceEeecCcch-----
Confidence            566  999999999999999   799999997631  12233333221              1233699999987     


Q ss_pred             HHHHHHH-------h-cCCcEEEEcCcccCc-----------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        121 EDSEQLI-------K-SKVNIIFHCAASLRF-----------DEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       121 ~~~~~~~-------~-~~~d~vi~~aa~~~~-----------~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                       ++++.+       + .++|++||+++....           .+.|...+++|+.++..+++.+.+
T Consensus        57 -~~v~~~~~~~~~~~~g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (241)
T PF13561_consen   57 -ESVEALFDEAVERFGGRIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALP  121 (241)
T ss_dssp             -HHHHHHHHHHHHHHCSSESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             -HHHHHHHHHHHhhcCCCeEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             555554       4 578999999987542           356778899999999999988754

...

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.59  E-value=6.5e-07  Score=71.28  Aligned_cols=109  Identities=13%  Similarity=0.063  Sum_probs=70.6

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCC----cCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeE-EEeCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPD----IGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQ-VIPSN  111 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~----~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~D  111 (177)
                      .+|+||||+|++|++++..|+..+.-    -..++.+++.+....+.....++                 .... ....|
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl-----------------~d~~~~~~~~   65 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMEL-----------------QDCAFPLLKS   65 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeeh-----------------hhccccccCC
Confidence            47999999999999999999886520    13789998865321110000000                 0000 11123


Q ss_pred             CCCCCCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        112 LESEHLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                      +...      .++...++++|+|||+||.... .++..+.++.|+.....+.+...++
T Consensus        66 ~~~~------~~~~~~l~~aDiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~  117 (325)
T cd01336          66 VVAT------TDPEEAFKDVDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKY  117 (325)
T ss_pred             ceec------CCHHHHhCCCCEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            3222      3456677899999999998643 3445678899999999998888776

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG1203|consensus

Probab=98.58  E-value=2.7e-07  Score=74.76  Aligned_cols=123  Identities=19%  Similarity=0.272  Sum_probs=78.3

Q ss_pred             ccccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEe
Q psy17489         30 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIP  109 (177)
Q Consensus        30 ~~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  109 (177)
                      ...+.+..+|+|+||+|.+|+-+++.|+++|   ..|++++|+....      .+.+.-          ...-.....+.
T Consensus        73 ~~~~~~~~~VlVvGatG~vG~~iv~~llkrg---f~vra~VRd~~~a------~~~~~~----------~~~d~~~~~v~  133 (411)
T KOG1203|consen   73 NNNSKKPTTVLVVGATGKVGRRIVKILLKRG---FSVRALVRDEQKA------EDLLGV----------FFVDLGLQNVE  133 (411)
T ss_pred             CCCCCCCCeEEEecCCCchhHHHHHHHHHCC---CeeeeeccChhhh------hhhhcc----------cccccccceee
Confidence            3455677899999999999999999999999   5899999976321      111110          00001222333


Q ss_pred             CCCCCCCCCCCHHHHHHHhcC----CcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        110 SNLESEHLGLSEDSEQLIKSK----VNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       110 ~D~~~~~~~~~~~~~~~~~~~----~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      .|.....     +.+..+.+.    ..+++-+++-....++....+++...|+.|++++|+.. +++|||+|
T Consensus       134 ~~~~~~~-----d~~~~~~~~~~~~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~a-Gvk~~vlv  199 (411)
T KOG1203|consen  134 ADVVTAI-----DILKKLVEAVPKGVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKA-GVKRVVLV  199 (411)
T ss_pred             ecccccc-----chhhhhhhhccccceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHh-CCceEEEE
Confidence            3333321     333444443    34666666644333222334578889999999999998 99999985

>KOG1014|consensus

Probab=98.57  E-value=1.8e-07  Score=72.66  Aligned_cols=112  Identities=15%  Similarity=0.223  Sum_probs=75.9

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      |+=++||||+.+||+..++.|+++|.   +|+.++|+.+      ++....++ +.++       ..-.+.++..|+++.
T Consensus        49 g~WAVVTGaTDGIGKayA~eLAkrG~---nvvLIsRt~~------KL~~v~kE-I~~~-------~~vev~~i~~Dft~~  111 (312)
T KOG1014|consen   49 GSWAVVTGATDGIGKAYARELAKRGF---NVVLISRTQE------KLEAVAKE-IEEK-------YKVEVRIIAIDFTKG  111 (312)
T ss_pred             CCEEEEECCCCcchHHHHHHHHHcCC---EEEEEeCCHH------HHHHHHHH-HHHH-------hCcEEEEEEEecCCC
Confidence            46799999999999999999999994   7999999863      22222111 0000       114578899999998


Q ss_pred             CCCCCHHHHHHHhc--CCcEEEEcCcccCc---------hHHHHHHHHHhHHHHHHHHHHHH
Q psy17489        116 HLGLSEDSEQLIKS--KVNIIFHCAASLRF---------DEALQKAIRANLYATKQMLNLAK  166 (177)
Q Consensus       116 ~~~~~~~~~~~~~~--~~d~vi~~aa~~~~---------~~~~~~~~~~nv~~~~~ll~~~~  166 (177)
                      +.  .-+.+.+.+.  ++.++|||+|....         .+...+.+.+|+.++..+.+...
T Consensus       112 ~~--~ye~i~~~l~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~il  171 (312)
T KOG1014|consen  112 DE--VYEKLLEKLAGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLIL  171 (312)
T ss_pred             ch--hHHHHHHHhcCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhh
Confidence            41  1144555555  46799999997541         11334567789998888777643

>KOG1431|consensus

Probab=98.56  E-value=1.8e-07  Score=69.79  Aligned_cols=98  Identities=23%  Similarity=0.293  Sum_probs=72.8

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +++|+|||++|.+|++|.+.+.+.|.+-.+- .+.                                   ..-.+|+++.
T Consensus         1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~w-vf~-----------------------------------~skd~DLt~~   44 (315)
T KOG1431|consen    1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENW-VFI-----------------------------------GSKDADLTNL   44 (315)
T ss_pred             CceEEEecCCchHHHHHHHHHHhcCCCCcce-EEe-----------------------------------ccccccccch
Confidence            3789999999999999999999887421111 111                                   1124588877


Q ss_pred             CCCCCHHHHHHHhc--CCcEEEEcCcccC----chHHHHHHHHHhHHHHHHHHHHHHhcCCCCCcee
Q psy17489        116 HLGLSEDSEQLIKS--KVNIIFHCAASLR----FDEALQKAIRANLYATKQMLNLAKECVNLKRFCE  176 (177)
Q Consensus       116 ~~~~~~~~~~~~~~--~~d~vi~~aa~~~----~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~  176 (177)
                            .+.+.+|+  ...+|||.||-++    ......++++.|+..-.|++..|-++ +++++|+
T Consensus        45 ------a~t~~lF~~ekPthVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~-gv~K~vs  104 (315)
T KOG1431|consen   45 ------ADTRALFESEKPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEH-GVKKVVS  104 (315)
T ss_pred             ------HHHHHHHhccCCceeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHh-chhhhhh
Confidence                  67777776  5799999998653    22334467899999999999999998 8888876

>KOG1372|consensus

Probab=98.54  E-value=6.6e-07  Score=67.69  Aligned_cols=114  Identities=16%  Similarity=0.197  Sum_probs=85.8

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |..||||-+|.=|+.|++.|+..||   .|..+.|+...... .++.+++.+...        .......++.+|++|. 
T Consensus        29 kvALITGItGQDGSYLaEfLL~KgY---eVHGiiRRsSsFNT-~RIeHlY~nP~~--------h~~~~mkLHYgDmTDs-   95 (376)
T KOG1372|consen   29 KVALITGITGQDGSYLAEFLLSKGY---EVHGIIRRSSSFNT-ARIEHLYSNPHT--------HNGASMKLHYGDMTDS-   95 (376)
T ss_pred             eEEEEecccCCCchHHHHHHHhCCc---eeeEEEeeccccch-hhhhhhhcCchh--------cccceeEEeeccccch-
Confidence            4799999999999999999999995   77777776644333 678887765332        1345678999999998 


Q ss_pred             CCCCHHHHHHHhc--CCcEEEEcCcccCchHH---HHHHHHHhHHHHHHHHHHHHhc
Q psy17489        117 LGLSEDSEQLIKS--KVNIIFHCAASLRFDEA---LQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       117 ~~~~~~~~~~~~~--~~d~vi~~aa~~~~~~~---~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                           ..+.+++.  ..+-|+|+|++.++.-+   .+...++...|+.+|+++.+.+
T Consensus        96 -----s~L~k~I~~ikPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c  147 (376)
T KOG1372|consen   96 -----SCLIKLISTIKPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRAC  147 (376)
T ss_pred             -----HHHHHHHhccCchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhc
Confidence                 67777776  46889999998654211   1224567778999999998877

>PRK09620 hypothetical protein; Provisional

Probab=98.53  E-value=3.8e-07  Score=69.09  Aligned_cols=82  Identities=15%  Similarity=0.292  Sum_probs=52.4

Q ss_pred             CCCceEEEecCC----------------cchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhccccc
Q psy17489         34 YRDGQILVTGGT----------------GFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKE   97 (177)
Q Consensus        34 ~~~~~vlVtG~~----------------G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (177)
                      +.||+|+||+|.                ||+|+++++.|++.|   +.|+++++......  ..                
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~G---a~V~li~g~~~~~~--~~----------------   59 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKG---AHVIYLHGYFAEKP--ND----------------   59 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCC---CeEEEEeCCCcCCC--cc----------------
Confidence            368999999886                999999999999999   57887765321100  00                


Q ss_pred             CcccCCCeEEEeCCCCCCCCCCCHHHHHHHhc--CCcEEEEcCcccCc
Q psy17489         98 VPDFRSKIQVIPSNLESEHLGLSEDSEQLIKS--KVNIIFHCAASLRF  143 (177)
Q Consensus        98 ~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~--~~d~vi~~aa~~~~  143 (177)
                      .+ ....+..+..+....      +.+..++.  ++|+|||+||+..+
T Consensus        60 ~~-~~~~~~~V~s~~d~~------~~l~~~~~~~~~D~VIH~AAvsD~  100 (229)
T PRK09620         60 IN-NQLELHPFEGIIDLQ------DKMKSIITHEKVDAVIMAAAGSDW  100 (229)
T ss_pred             cC-CceeEEEEecHHHHH------HHHHHHhcccCCCEEEECccccce
Confidence            00 011233344422222      35666664  68999999998654

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=98.40  E-value=5.2e-06  Score=62.12  Aligned_cols=116  Identities=14%  Similarity=0.160  Sum_probs=79.5

Q ss_pred             cCCCceEEEecCCc--chHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489         33 FYRDGQILVTGGTG--FMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS  110 (177)
Q Consensus        33 ~~~~~~vlVtG~~G--~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  110 (177)
                      .++||+++|+|-..  .|+..|++.|.++|   +++......+   +++++++++.+.             .....+++|
T Consensus         3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~G---AeL~fTy~~e---~l~krv~~la~~-------------~~s~~v~~c   63 (259)
T COG0623           3 LLEGKRILIMGVANNRSIAWGIAKALAEQG---AELAFTYQGE---RLEKRVEELAEE-------------LGSDLVLPC   63 (259)
T ss_pred             ccCCceEEEEEecccccHHHHHHHHHHHcC---CEEEEEeccH---HHHHHHHHHHhh-------------ccCCeEEec
Confidence            47899999999755  69999999999999   6766665543   455666665442             233567899


Q ss_pred             CCCCCC-CCCCHHHHHHHhcCCcEEEEcCcccCc-----------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        111 NLESEH-LGLSEDSEQLIKSKVNIIFHCAASLRF-----------DEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       111 D~~~~~-~~~~~~~~~~~~~~~d~vi~~aa~~~~-----------~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      |++++. +....+.+.+-+..+|+++|+-|+...           .+.+...+++.......+.+.++.
T Consensus        64 DV~~d~~i~~~f~~i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~  132 (259)
T COG0623          64 DVTNDESIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARP  132 (259)
T ss_pred             CCCCHHHHHHHHHHHHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHH
Confidence            999983 222233333344478999999997642           234444567777777777777765

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=98.39  E-value=3e-06  Score=68.42  Aligned_cols=86  Identities=14%  Similarity=0.141  Sum_probs=57.3

Q ss_pred             CCCceEEEecCCcchHHH--HHHHHHhhCCCcCeEEEEEeCCCCCC---------hHHHHHHHHhhhhhhcccccCcccC
Q psy17489         34 YRDGQILVTGGTGFMGKL--LIDKLLRSFPDIGAIYIMVRDKKGSS---------PEERVKNMLNSVIFDRLNKEVPDFR  102 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~--l~~~L~~~g~~~~~v~~~~r~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      ..+|+++|||+++++|.+  +++.| +.|   .+++++.+......         ..+.+.+....            ..
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~G---A~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~------------~G  102 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAG---ADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKA------------AG  102 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcC---CeEEEEecCcchhhhcccccccchHHHHHHHHHh------------cC
Confidence            356899999999999999  89999 888   57777775321110         01122222211            12


Q ss_pred             CCeEEEeCCCCCCCCCCCHHHHHHH-------hcCCcEEEEcCccc
Q psy17489        103 SKIQVIPSNLESEHLGLSEDSEQLI-------KSKVNIIFHCAASL  141 (177)
Q Consensus       103 ~~v~~~~~D~~~~~~~~~~~~~~~~-------~~~~d~vi~~aa~~  141 (177)
                      ..+..+.+|+.++      +.+..+       +.++|++||++|..
T Consensus       103 ~~a~~i~~DVss~------E~v~~lie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        103 LYAKSINGDAFSD------EIKQKVIELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             CceEEEEcCCCCH------HHHHHHHHHHHHhcCCCCEEEECCccC
Confidence            3567789999997      444444       34689999999975

>KOG2774|consensus

Probab=98.34  E-value=2.4e-07  Score=69.59  Aligned_cols=113  Identities=19%  Similarity=0.231  Sum_probs=78.1

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      +..+.-+|+|||+-|.+|..++..|... +.-..|+..+-.+....                       -...--++..|
T Consensus        40 ~~~~~PrvLITG~LGQLG~~~A~LLR~~-yGs~~VILSDI~KPp~~-----------------------V~~~GPyIy~D   95 (366)
T KOG2774|consen   40 QTQKAPRVLITGSLGQLGRGLASLLRYM-YGSECVILSDIVKPPAN-----------------------VTDVGPYIYLD   95 (366)
T ss_pred             ccCCCCeEEEecchHHHhHHHHHHHHHH-hCCccEehhhccCCchh-----------------------hcccCCchhhh
Confidence            3445568999999999999999999765 33356766554332210                       01223467788


Q ss_pred             CCCCCCCCCHHHHHHHh--cCCcEEEEcCcccCc-hH-HHHHHHHHhHHHHHHHHHHHHhcCCCCCce
Q psy17489        112 LESEHLGLSEDSEQLIK--SKVNIIFHCAASLRF-DE-ALQKAIRANLYATKQMLNLAKECVNLKRFC  175 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~--~~~d~vi~~aa~~~~-~~-~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v  175 (177)
                      +.|.      ..+++++  .++|++||..+..+- .+ +-.-+.++|+.|..|+++.|+++ +++-||
T Consensus        96 ILD~------K~L~eIVVn~RIdWL~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~-kL~iFV  156 (366)
T KOG2774|consen   96 ILDQ------KSLEEIVVNKRIDWLVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKH-KLKVFV  156 (366)
T ss_pred             hhcc------ccHHHhhcccccceeeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHc-CeeEee
Confidence            8887      5666654  479999999886431 11 11125789999999999999999 776665

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.34  E-value=2.8e-06  Score=68.72  Aligned_cols=79  Identities=20%  Similarity=0.354  Sum_probs=63.8

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +++++|.|| |++|+.++..|++.|.  .+|++.+|+....   +++...               ...+++.++.|+.+.
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d--~~V~iAdRs~~~~---~~i~~~---------------~~~~v~~~~vD~~d~   59 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGD--GEVTIADRSKEKC---ARIAEL---------------IGGKVEALQVDAADV   59 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCC--ceEEEEeCCHHHH---HHHHhh---------------ccccceeEEecccCh
Confidence            478999998 9999999999999874  7999999985321   222221               224899999999998


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCccc
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAASL  141 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa~~  141 (177)
                            +.+.+++++.|+||+++.+.
T Consensus        60 ------~al~~li~~~d~VIn~~p~~   79 (389)
T COG1748          60 ------DALVALIKDFDLVINAAPPF   79 (389)
T ss_pred             ------HHHHHHHhcCCEEEEeCCch
Confidence                  78999999999999999863

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.34  E-value=3.4e-06  Score=63.97  Aligned_cols=77  Identities=12%  Similarity=0.253  Sum_probs=48.7

Q ss_pred             eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCC
Q psy17489         38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHL  117 (177)
Q Consensus        38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~  117 (177)
                      +++=-.++|++|.++++.|++.|   ++|+++.|.....                      +....++.++.++..+.- 
T Consensus        18 R~itN~SSG~iG~aLA~~L~~~G---~~V~li~r~~~~~----------------------~~~~~~v~~i~v~s~~~m-   71 (229)
T PRK06732         18 RGITNHSTGQLGKIIAETFLAAG---HEVTLVTTKTAVK----------------------PEPHPNLSIIEIENVDDL-   71 (229)
T ss_pred             eeecCccchHHHHHHHHHHHhCC---CEEEEEECccccc----------------------CCCCCCeEEEEEecHHHH-
Confidence            34444568899999999999999   5888887653210                      000134566554322210 


Q ss_pred             CCCHHHHHHHhcCCcEEEEcCcccCc
Q psy17489        118 GLSEDSEQLIKSKVNIIFHCAASLRF  143 (177)
Q Consensus       118 ~~~~~~~~~~~~~~d~vi~~aa~~~~  143 (177)
                         .+.+...++++|++||+||...+
T Consensus        72 ---~~~l~~~~~~~DivIh~AAvsd~   94 (229)
T PRK06732         72 ---LETLEPLVKDHDVLIHSMAVSDY   94 (229)
T ss_pred             ---HHHHHHHhcCCCEEEeCCccCCc
Confidence               03445556789999999998653

>KOG1478|consensus

Probab=98.30  E-value=8.3e-06  Score=61.98  Aligned_cols=120  Identities=12%  Similarity=0.155  Sum_probs=74.9

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCC--cCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPD--IGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~--~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      |.++|||+++++|.+|+.+|++...+  +-++....|+-  .++++-..++.+-         .+...-+++++..|++|
T Consensus         4 KvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~--~kae~vc~~lk~f---------~p~~~i~~~yvlvD~sN   72 (341)
T KOG1478|consen    4 KVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNM--SKAEAVCAALKAF---------HPKSTIEVTYVLVDVSN   72 (341)
T ss_pred             eEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCCh--hHHHHHHHHHHHh---------CCCceeEEEEEEEehhh
Confidence            57999999999999999999987532  11455556654  2233333332221         12123467889999998


Q ss_pred             CC-CCCCHHHHHHHhcCCcEEEEcCcccCc----------------------------------hHHHHHHHHHhHHHHH
Q psy17489        115 EH-LGLSEDSEQLIKSKVNIIFHCAASLRF----------------------------------DEALQKAIRANLYATK  159 (177)
Q Consensus       115 ~~-~~~~~~~~~~~~~~~d~vi~~aa~~~~----------------------------------~~~~~~~~~~nv~~~~  159 (177)
                      -. +-..-.++.+-+.+.|.++-|||+...                                  .++....++.||.|.+
T Consensus        73 m~Sv~~A~~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhf  152 (341)
T KOG1478|consen   73 MQSVFRASKDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHF  152 (341)
T ss_pred             HHHHHHHHHHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchh
Confidence            62 000112222234478999999997431                                  2344567899999998


Q ss_pred             HHHHHHHh
Q psy17489        160 QMLNLAKE  167 (177)
Q Consensus       160 ~ll~~~~~  167 (177)
                      .+++....
T Consensus       153 yli~~l~p  160 (341)
T KOG1478|consen  153 YLIRELEP  160 (341)
T ss_pred             hhHhhhhh
Confidence            88776543

>PRK05086 malate dehydrogenase; Provisional

Probab=98.24  E-value=1.4e-05  Score=63.38  Aligned_cols=114  Identities=11%  Similarity=0.026  Sum_probs=73.1

Q ss_pred             ceEEEecCCcchHHHHHHHHHh-hCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLR-SFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~-~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      |+++|+||+|.+|++++..|.. .+ ....++++++++...   ....++             . .......+.+  .+.
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~-~~~el~L~d~~~~~~---g~alDl-------------~-~~~~~~~i~~--~~~   60 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLP-AGSELSLYDIAPVTP---GVAVDL-------------S-HIPTAVKIKG--FSG   60 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCC-CccEEEEEecCCCCc---ceehhh-------------h-cCCCCceEEE--eCC
Confidence            6899999999999999998855 33 234667767654211   000000             0 0011111222  111


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                            +++...++++|+||.++|.... .++..+.+..|......+++...++ +.+++|.+
T Consensus        61 ------~d~~~~l~~~DiVIitaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~-~~~~iviv  116 (312)
T PRK05086         61 ------EDPTPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKT-CPKACIGI  116 (312)
T ss_pred             ------CCHHHHcCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEE
Confidence                  2344556889999999997543 3345668899999999999999998 77777753

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.23  E-value=5e-06  Score=67.92  Aligned_cols=76  Identities=18%  Similarity=0.148  Sum_probs=54.9

Q ss_pred             ccCCCceEEEecC----------------CcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhccc
Q psy17489         32 DFYRDGQILVTGG----------------TGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLN   95 (177)
Q Consensus        32 ~~~~~~~vlVtG~----------------~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~   95 (177)
                      ..++||+++||||                +|.+|.++++.|.+.|   ++|+++++.....                   
T Consensus       184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~G---a~V~~v~~~~~~~-------------------  241 (399)
T PRK05579        184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRG---ADVTLVSGPVNLP-------------------  241 (399)
T ss_pred             cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCC---CEEEEeCCCcccc-------------------
Confidence            3468999999999                8889999999999999   6888887754210                   


Q ss_pred             ccCcccCCCeEEEeCCCCCCCCCCCHHHHHHH----hcCCcEEEEcCcccC
Q psy17489         96 KEVPDFRSKIQVIPSNLESEHLGLSEDSEQLI----KSKVNIIFHCAASLR  142 (177)
Q Consensus        96 ~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~----~~~~d~vi~~aa~~~  142 (177)
                           ....  ....|+.+.      +++..+    ++++|++||+||+..
T Consensus       242 -----~~~~--~~~~dv~~~------~~~~~~v~~~~~~~DilI~~Aav~d  279 (399)
T PRK05579        242 -----TPAG--VKRIDVESA------QEMLDAVLAALPQADIFIMAAAVAD  279 (399)
T ss_pred             -----CCCC--cEEEccCCH------HHHHHHHHHhcCCCCEEEEcccccc
Confidence                 0011  234577765      444443    347899999999854

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=98.22  E-value=3e-06  Score=64.46  Aligned_cols=90  Identities=11%  Similarity=0.070  Sum_probs=65.8

Q ss_pred             HHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCCCCCHHHHHHHhc--
Q psy17489         52 LIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLGLSEDSEQLIKS--  129 (177)
Q Consensus        52 l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~--  129 (177)
                      +++.|++.|   ++|++++|+....                          ....++++|+++.      +++..+++  
T Consensus         1 ~a~~l~~~G---~~Vv~~~r~~~~~--------------------------~~~~~~~~Dl~~~------~~v~~~~~~~   45 (241)
T PRK12428          1 TARLLRFLG---ARVIGVDRREPGM--------------------------TLDGFIQADLGDP------ASIDAAVAAL   45 (241)
T ss_pred             ChHHHHhCC---CEEEEEeCCcchh--------------------------hhhHhhcccCCCH------HHHHHHHHHh
Confidence            467888898   6899998875321                          0123578899987      66776665  


Q ss_pred             --CCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhc-CCCCCceeC
Q psy17489        130 --KVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKEC-VNLKRFCEL  177 (177)
Q Consensus       130 --~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~v  177 (177)
                        ++|++|||||... ..+++..+++|+.++..+++.+.+. ....+||++
T Consensus        46 ~~~iD~li~nAG~~~-~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~i   95 (241)
T PRK12428         46 PGRIDALFNIAGVPG-TAPVELVARVNFLGLRHLTEALLPRMAPGGAIVNV   95 (241)
T ss_pred             cCCCeEEEECCCCCC-CCCHHHhhhhchHHHHHHHHHHHHhccCCcEEEEe
Confidence              5899999999753 3567889999999999999998753 122577764

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.14  E-value=1.3e-05  Score=65.18  Aligned_cols=78  Identities=17%  Similarity=0.386  Sum_probs=56.4

Q ss_pred             EEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCCC
Q psy17489         39 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLG  118 (177)
Q Consensus        39 vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~  118 (177)
                      |+|.|| |++|+.+++.|.+.+ ...+|++.+|+.      +++++...+.           ...++.++..|+.|.   
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~-~~~~v~va~r~~------~~~~~~~~~~-----------~~~~~~~~~~d~~~~---   58 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRG-PFEEVTVADRNP------EKAERLAEKL-----------LGDRVEAVQVDVNDP---   58 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTT-CE-EEEEEESSH------HHHHHHHT-------------TTTTEEEEE--TTTH---
T ss_pred             CEEEcC-cHHHHHHHHHHhcCC-CCCcEEEEECCH------HHHHHHHhhc-----------cccceeEEEEecCCH---
Confidence            689999 999999999999985 333889999876      3333332210           236899999999998   


Q ss_pred             CCHHHHHHHhcCCcEEEEcCccc
Q psy17489        119 LSEDSEQLIKSKVNIIFHCAASL  141 (177)
Q Consensus       119 ~~~~~~~~~~~~~d~vi~~aa~~  141 (177)
                         +++..++++.|+|||++++.
T Consensus        59 ---~~l~~~~~~~dvVin~~gp~   78 (386)
T PF03435_consen   59 ---ESLAELLRGCDVVINCAGPF   78 (386)
T ss_dssp             ---HHHHHHHTTSSEEEE-SSGG
T ss_pred             ---HHHHHHHhcCCEEEECCccc
Confidence               77999999999999999975

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.12  E-value=1.4e-05  Score=63.87  Aligned_cols=40  Identities=18%  Similarity=0.282  Sum_probs=33.3

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .+.+++++||||+|+||+.++++|...+ .+..++.+.|+.
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~-gv~~lilv~R~~  191 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKT-GVAELLLVARQQ  191 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhC-CCCEEEEEcCCH
Confidence            5788999999999999999999998642 246888888864

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.12  E-value=1.4e-05  Score=59.03  Aligned_cols=84  Identities=21%  Similarity=0.225  Sum_probs=56.2

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++++++|+||+|.+|..++..|.+.|   .+|+..+|+.      ++.......     +.     ..........|.
T Consensus        25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g---~~V~l~~R~~------~~~~~l~~~-----l~-----~~~~~~~~~~~~   85 (194)
T cd01078          25 DLKGKTAVVLGGTGPVGQRAAVLLAREG---ARVVLVGRDL------ERAQKAADS-----LR-----ARFGEGVGAVET   85 (194)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEcCCH------HHHHHHHHH-----HH-----hhcCCcEEEeeC
Confidence            3568999999999999999999999987   5888888864      222222111     00     001233445566


Q ss_pred             CCCCCCCCHHHHHHHhcCCcEEEEcCccc
Q psy17489        113 ESEHLGLSEDSEQLIKSKVNIIFHCAASL  141 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~d~vi~~aa~~  141 (177)
                      .+.      +++...+.++|+||++.+..
T Consensus        86 ~~~------~~~~~~~~~~diVi~at~~g  108 (194)
T cd01078          86 SDD------AARAAAIKGADVVFAAGAAG  108 (194)
T ss_pred             CCH------HHHHHHHhcCCEEEECCCCC
Confidence            665      56677788899988876543

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=98.11  E-value=3.7e-05  Score=61.30  Aligned_cols=103  Identities=15%  Similarity=0.153  Sum_probs=69.6

Q ss_pred             eEEEecCCcchHHHHHHHHHhhCCCcC-----eEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         38 QILVTGGTGFMGKLLIDKLLRSFPDIG-----AIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~-----~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      +|.|+|++|.+|++++..|...|. +.     .++.+++.+...                           .......|+
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~-~~~~~e~el~LiD~~~~~~---------------------------~a~g~~~Dl   52 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRM-LGKDQPIILHLLDIPPAMK---------------------------VLEGVVMEL   52 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccc-cCCCCccEEEEEecCCccc---------------------------ccceeEeeh
Confidence            589999999999999999987653 11     588888754321                           112223333


Q ss_pred             CCCCCCC-----CHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        113 ESEHLGL-----SEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       113 ~~~~~~~-----~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                      .+.....     ........++++|+||++||.... .+++.+.++.|+.....+.+...++
T Consensus        53 ~d~~~~~~~~~~~~~~~~~~~~~aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~  114 (324)
T TIGR01758        53 MDCAFPLLDGVVPTHDPAVAFTDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKL  114 (324)
T ss_pred             hcccchhcCceeccCChHHHhCCCCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence            3332000     001224567899999999997543 3457788999999999999988886

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>cd00704 MDH Malate dehydrogenase

Probab=98.08  E-value=4.7e-05  Score=60.64  Aligned_cols=103  Identities=15%  Similarity=0.118  Sum_probs=69.0

Q ss_pred             eEEEecCCcchHHHHHHHHHhhCCCcC-----eEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         38 QILVTGGTGFMGKLLIDKLLRSFPDIG-----AIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~-----~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      +|.|+||+|.+|++++..|...|. +.     .++.+++++..+                           .......|+
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~-~~~~~~~~l~L~Di~~~~~---------------------------~~~g~~~Dl   53 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGEL-FGDDQPVILHLLDIPPAMK---------------------------ALEGVVMEL   53 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCc-cCCCCceEEEEEecCCccC---------------------------ccceeeeeh
Confidence            689999999999999999987653 22     488888765210                           112222333


Q ss_pred             CCCCCC-C----CHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        113 ESEHLG-L----SEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       113 ~~~~~~-~----~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                      .+.... .    ........++++|+||++||.... .++-.+.++.|+.....+.....++
T Consensus        54 ~d~~~~~~~~~~i~~~~~~~~~~aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~  115 (323)
T cd00704          54 QDCAFPLLKGVVITTDPEEAFKDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKV  115 (323)
T ss_pred             hhhcccccCCcEEecChHHHhCCCCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHh
Confidence            332100 0    001234567899999999997542 3456678899999999999888876

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.08  E-value=2.6e-05  Score=61.18  Aligned_cols=86  Identities=10%  Similarity=0.033  Sum_probs=57.0

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCC-CChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG-SSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .++++++|+|+ |++|++++..|.+.|.  .+|++++|+... ++. +.+.+.+..            ....+.+...|+
T Consensus       124 ~~~k~vlI~GA-GGagrAia~~La~~G~--~~V~I~~R~~~~~~~a-~~l~~~l~~------------~~~~~~~~~~d~  187 (289)
T PRK12548        124 VKGKKLTVIGA-GGAATAIQVQCALDGA--KEITIFNIKDDFYERA-EQTAEKIKQ------------EVPECIVNVYDL  187 (289)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCC--CEEEEEeCCchHHHHH-HHHHHHHhh------------cCCCceeEEech
Confidence            46789999998 7999999999999984  569999987521 111 112111110            112344556677


Q ss_pred             CCCCCCCCHHHHHHHhcCCcEEEEcCccc
Q psy17489        113 ESEHLGLSEDSEQLIKSKVNIIFHCAASL  141 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~d~vi~~aa~~  141 (177)
                      .+.      +.+...++.+|+|||+-...
T Consensus       188 ~~~------~~~~~~~~~~DilINaTp~G  210 (289)
T PRK12548        188 NDT------EKLKAEIASSDILVNATLVG  210 (289)
T ss_pred             hhh------hHHHhhhccCCEEEEeCCCC
Confidence            665      55666777889999987643

>KOG2733|consensus

Probab=97.95  E-value=4.3e-05  Score=60.67  Aligned_cols=89  Identities=18%  Similarity=0.342  Sum_probs=60.2

Q ss_pred             eEEEecCCcchHHHHHHHHHhhC-CCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         38 QILVTGGTGFMGKLLIDKLLRSF-PDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        38 ~vlVtG~~G~iG~~l~~~L~~~g-~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      -++|.||+||.|..+++.+.+.+ .+--..-+..|++      +++.+.+.+....     ...+.+....+-+|..|+ 
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~------~KL~~vL~~~~~k-----~~~~ls~~~i~i~D~~n~-   74 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNE------KKLQEVLEKVGEK-----TGTDLSSSVILIADSANE-   74 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCH------HHHHHHHHHHhhc-----cCCCcccceEEEecCCCH-
Confidence            58999999999999999998822 0113555556665      3343333221111     111123334788999998 


Q ss_pred             CCCCHHHHHHHhcCCcEEEEcCcccCc
Q psy17489        117 LGLSEDSEQLIKSKVNIIFHCAASLRF  143 (177)
Q Consensus       117 ~~~~~~~~~~~~~~~d~vi~~aa~~~~  143 (177)
                           +++.+..+++.+|+||+|+..+
T Consensus        75 -----~Sl~emak~~~vivN~vGPyR~   96 (423)
T KOG2733|consen   75 -----ASLDEMAKQARVIVNCVGPYRF   96 (423)
T ss_pred             -----HHHHHHHhhhEEEEecccccee
Confidence                 8999999999999999998654

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.91  E-value=0.00017  Score=50.58  Aligned_cols=111  Identities=13%  Similarity=0.129  Sum_probs=72.5

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCC-hHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSS-PEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      ++|.|+|++|.+|++++..|...+. ..+++.++++++... ....+.+....            ...+......+..  
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l-~~ei~L~D~~~~~~~g~a~Dl~~~~~~------------~~~~~~i~~~~~~--   65 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGL-ADEIVLIDINEDKAEGEALDLSHASAP------------LPSPVRITSGDYE--   65 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTT-SSEEEEEESSHHHHHHHHHHHHHHHHG------------STEEEEEEESSGG--
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCC-CCceEEeccCcccceeeehhhhhhhhh------------ccccccccccccc--
Confidence            5899999999999999999998864 467999988753110 01122221110            1112233332222  


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCc
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKECVNLKRF  174 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~  174 (177)
                                 .++++|+||-+||.... .++-.+.++.|......+.+...++ ..+-+
T Consensus        66 -----------~~~~aDivvitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~-~p~~~  113 (141)
T PF00056_consen   66 -----------ALKDADIVVITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKY-APDAI  113 (141)
T ss_dssp             -----------GGTTESEEEETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHH-STTSE
T ss_pred             -----------ccccccEEEEeccccccccccHHHHHHHhHhHHHHHHHHHHHh-CCccE
Confidence                       35788999999997532 3456678899999999999988887 44333

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>KOG4288|consensus

Probab=97.87  E-value=2.3e-05  Score=58.78  Aligned_cols=108  Identities=16%  Similarity=0.197  Sum_probs=82.0

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      ...++.|++||.|+++++.-...|   ..|-.+.|++.. +.    .               ..+...+.|+++|.... 
T Consensus        53 e~tlvlggnpfsgs~vlk~A~~vv---~svgilsen~~k-~~----l---------------~sw~~~vswh~gnsfss-  108 (283)
T KOG4288|consen   53 EWTLVLGGNPFSGSEVLKNATNVV---HSVGILSENENK-QT----L---------------SSWPTYVSWHRGNSFSS-  108 (283)
T ss_pred             HHHhhhcCCCcchHHHHHHHHhhc---eeeeEeecccCc-ch----h---------------hCCCcccchhhcccccc-
Confidence            468999999999999999999987   578888887542 11    1               12456788999987665 


Q ss_pred             CCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        117 LGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       117 ~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                           .-++....++..++.+++..+   ....+.++|-....+..+++.+. ++++||||
T Consensus       109 -----n~~k~~l~g~t~v~e~~ggfg---n~~~m~~ing~ani~a~kaa~~~-gv~~fvyI  160 (283)
T KOG4288|consen  109 -----NPNKLKLSGPTFVYEMMGGFG---NIILMDRINGTANINAVKAAAKA-GVPRFVYI  160 (283)
T ss_pred             -----CcchhhhcCCcccHHHhcCcc---chHHHHHhccHhhHHHHHHHHHc-CCceEEEE
Confidence                 235555667788888887543   23446688888888999999998 99999996

>KOG1204|consensus

Probab=97.87  E-value=0.00019  Score=53.79  Aligned_cols=106  Identities=21%  Similarity=0.199  Sum_probs=65.1

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      .++.+++||++.+||..++..+...+.. ..++...|....                          ...+....+|...
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e-~~r~g~~r~~a~--------------------------~~~L~v~~gd~~v   57 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDE-ALRYGVARLLAE--------------------------LEGLKVAYGDDFV   57 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchH-HHHHhhhccccc--------------------------ccceEEEecCCcc
Confidence            3567999999999999999988887632 122333332211                          1344444444443


Q ss_pred             CCCCC-CHHH-HHHHhc-------CCcEEEEcCcccC----------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        115 EHLGL-SEDS-EQLIKS-------KVNIIFHCAASLR----------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       115 ~~~~~-~~~~-~~~~~~-------~~d~vi~~aa~~~----------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      ...+. .++. +...++       .-++||||||...          ....|..+|+.|+.+...|.+++..
T Consensus        58 ~~~g~~~e~~~l~al~e~~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~  129 (253)
T KOG1204|consen   58 HVVGDITEEQLLGALREAPRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALP  129 (253)
T ss_pred             eechHHHHHHHHHHHHhhhhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHH
Confidence            33221 1111 111111       4699999999643          2467888999999999999887754

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=97.71  E-value=0.00015  Score=59.18  Aligned_cols=101  Identities=12%  Similarity=0.187  Sum_probs=63.3

Q ss_pred             cCCCceEEEecCC----------------cchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccc
Q psy17489         33 FYRDGQILVTGGT----------------GFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNK   96 (177)
Q Consensus        33 ~~~~~~vlVtG~~----------------G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~   96 (177)
                      .++|++++||||.                |.+|.++++.|...|   ++|+.+.+.....                    
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~G---a~V~~~~g~~~~~--------------------  238 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRG---ADVTLITGPVSLL--------------------  238 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCC---CEEEEeCCCCccC--------------------
Confidence            4789999999993                469999999999999   6888777543210                    


Q ss_pred             cCcccCCCeEEEeCCCCCCCCCCCHHHH-HHHh----cCCcEEEEcCcccCchHH------H---HHHHHHhHHHHHHHH
Q psy17489         97 EVPDFRSKIQVIPSNLESEHLGLSEDSE-QLIK----SKVNIIFHCAASLRFDEA------L---QKAIRANLYATKQML  162 (177)
Q Consensus        97 ~~~~~~~~v~~~~~D~~~~~~~~~~~~~-~~~~----~~~d~vi~~aa~~~~~~~------~---~~~~~~nv~~~~~ll  162 (177)
                          ....+  ...|+.+.      +++ +.++    .++|++|++||+..+...      +   ...+..|+..+--++
T Consensus       239 ----~~~~~--~~~~v~~~------~~~~~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil  306 (390)
T TIGR00521       239 ----TPPGV--KSIKVSTA------EEMLEAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDII  306 (390)
T ss_pred             ----CCCCc--EEEEeccH------HHHHHHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHH
Confidence                00122  34566665      444 4333    468999999998653110      0   111234555555566


Q ss_pred             HHHHhc
Q psy17489        163 NLAKEC  168 (177)
Q Consensus       163 ~~~~~~  168 (177)
                      +..++.
T Consensus       307 ~~l~~~  312 (390)
T TIGR00521       307 AEVRKI  312 (390)
T ss_pred             HHHHhh
Confidence            665543

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.63  E-value=0.00047  Score=57.22  Aligned_cols=78  Identities=13%  Similarity=0.169  Sum_probs=53.4

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++|+|+++ +|..+++.|++.|   +.|++.+++... ...+.+.++..               ..+.++.+|..
T Consensus         3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G---~~V~~~d~~~~~-~~~~~~~~l~~---------------~~~~~~~~~~~   62 (450)
T PRK14106          3 LKGKKVLVVGAGV-SGLALAKFLKKLG---AKVILTDEKEED-QLKEALEELGE---------------LGIELVLGEYP   62 (450)
T ss_pred             cCCCEEEEECCCH-HHHHHHHHHHHCC---CEEEEEeCCchH-HHHHHHHHHHh---------------cCCEEEeCCcc
Confidence            4689999999888 9999999999999   588888875421 12122222111               24566777665


Q ss_pred             CCCCCCCHHHHHHHhcCCcEEEEcCcccC
Q psy17489        114 SEHLGLSEDSEQLIKSKVNIIFHCAASLR  142 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~d~vi~~aa~~~  142 (177)
                      +.           ..+++|+||++++...
T Consensus        63 ~~-----------~~~~~d~vv~~~g~~~   80 (450)
T PRK14106         63 EE-----------FLEGVDLVVVSPGVPL   80 (450)
T ss_pred             hh-----------HhhcCCEEEECCCCCC
Confidence            42           2457899999999743

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=97.59  E-value=0.00046  Score=53.23  Aligned_cols=74  Identities=14%  Similarity=0.186  Sum_probs=50.5

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+|+|+||||. |..+++.|.+.|   ..|++..+++.....   +.                 .......+ .+..+. 
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g---~~v~~s~~t~~~~~~---~~-----------------~~g~~~v~-~g~l~~-   54 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQG---IEILVTVTTSEGKHL---YP-----------------IHQALTVH-TGALDP-   54 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCC---CeEEEEEccCCcccc---cc-----------------ccCCceEE-ECCCCH-
Confidence            57999999999 999999999998   588888887654311   00                 00112233 333443 


Q ss_pred             CCCCHHHHHHHhc--CCcEEEEcCccc
Q psy17489        117 LGLSEDSEQLIKS--KVNIIFHCAASL  141 (177)
Q Consensus       117 ~~~~~~~~~~~~~--~~d~vi~~aa~~  141 (177)
                           +.+...+.  ++++||+.+.+.
T Consensus        55 -----~~l~~~l~~~~i~~VIDAtHPf   76 (256)
T TIGR00715        55 -----QELREFLKRHSIDILVDATHPF   76 (256)
T ss_pred             -----HHHHHHHHhcCCCEEEEcCCHH
Confidence                 55766664  599999998863

This enzyme was found to be a monomer by gel filtration.

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.56  E-value=0.0018  Score=51.44  Aligned_cols=107  Identities=12%  Similarity=0.155  Sum_probs=70.2

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCC-hHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSS-PEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      ..+++|.|+|+ |.+|.+++..|+..|. +..+..++++++... ....+.+...             ...++.....  
T Consensus         4 ~~~~ki~iiGa-G~vG~~~a~~l~~~~~-~~el~L~D~~~~~~~g~~~Dl~~~~~-------------~~~~~~i~~~--   66 (315)
T PRK00066          4 KQHNKVVLVGD-GAVGSSYAYALVNQGI-ADELVIIDINKEKAEGDAMDLSHAVP-------------FTSPTKIYAG--   66 (315)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEeCCCchhHHHHHHHHhhcc-------------ccCCeEEEeC--
Confidence            35679999998 9999999999998873 347888888653221 1112222110             0112222221  


Q ss_pred             CCCCCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        113 ESEHLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                                .++ .++++|+||-.||.... .++-.+.++.|+.....+++...++
T Consensus        67 ----------~~~-~~~~adivIitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~  112 (315)
T PRK00066         67 ----------DYS-DCKDADLVVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMAS  112 (315)
T ss_pred             ----------CHH-HhCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence                      122 36899999999997432 3455668899999999998888876

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.54  E-value=0.0012  Score=45.94  Aligned_cols=79  Identities=19%  Similarity=0.214  Sum_probs=53.2

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++++++|.|+ |+.|+.++..|.+.|.  .+|+++.|+.      ++.+++....           ....+.++..  
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~--~~i~i~nRt~------~ra~~l~~~~-----------~~~~~~~~~~--   66 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGA--KEITIVNRTP------ERAEALAEEF-----------GGVNIEAIPL--   66 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTS--SEEEEEESSH------HHHHHHHHHH-----------TGCSEEEEEG--
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCC--CEEEEEECCH------HHHHHHHHHc-----------CccccceeeH--
Confidence            567999999996 8899999999999984  6799999875      3333333211           0123444443  


Q ss_pred             CCCCCCCCHHHHHHHhcCCcEEEEcCcccC
Q psy17489        113 ESEHLGLSEDSEQLIKSKVNIIFHCAASLR  142 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~  142 (177)
                               +++...+.++|+||++.+...
T Consensus        67 ---------~~~~~~~~~~DivI~aT~~~~   87 (135)
T PF01488_consen   67 ---------EDLEEALQEADIVINATPSGM   87 (135)
T ss_dssp             ---------GGHCHHHHTESEEEE-SSTTS
T ss_pred             ---------HHHHHHHhhCCeEEEecCCCC
Confidence                     234456678899999977543

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.53  E-value=0.00041  Score=50.92  Aligned_cols=79  Identities=20%  Similarity=0.274  Sum_probs=45.8

Q ss_pred             CCCceEEEecC----------------CcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhccccc
Q psy17489         34 YRDGQILVTGG----------------TGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKE   97 (177)
Q Consensus        34 ~~~~~vlVtG~----------------~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (177)
                      ++||+|+||+|                +|..|.+|++.+...|   +.|+.+.......                     
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~G---a~V~li~g~~~~~---------------------   56 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRG---AEVTLIHGPSSLP---------------------   56 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT----EEEEEE-TTS-----------------------
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCC---CEEEEEecCcccc---------------------
Confidence            35677777765                5669999999999999   6788776653110                     


Q ss_pred             CcccCCCeEEEeCCCCCCCCCCCHHHHHHHhcCCcEEEEcCcccCc
Q psy17489         98 VPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRF  143 (177)
Q Consensus        98 ~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~  143 (177)
                         ....+..+..+-..+-    .+.+...+...|++|++||+.++
T Consensus        57 ---~p~~~~~i~v~sa~em----~~~~~~~~~~~Di~I~aAAVsDf   95 (185)
T PF04127_consen   57 ---PPPGVKVIRVESAEEM----LEAVKELLPSADIIIMAAAVSDF   95 (185)
T ss_dssp             -----TTEEEEE-SSHHHH----HHHHHHHGGGGSEEEE-SB--SE
T ss_pred             ---ccccceEEEecchhhh----hhhhccccCcceeEEEecchhhe
Confidence               1135666665433320    13344455678999999998764

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=97.52  E-value=0.002  Score=51.42  Aligned_cols=110  Identities=12%  Similarity=0.044  Sum_probs=70.3

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcC-----eEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIG-----AIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS  110 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~-----~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  110 (177)
                      ..+|.|+|++|++|++++..|+..|. +.     .++.++..+....+.-...++...         ......++.... 
T Consensus         3 p~KV~IIGa~G~VG~~~a~~l~~~~~-~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~---------~~~~~~~~~i~~-   71 (323)
T TIGR01759         3 PVRVAVTGAAGQIGYSLLFRIASGEL-FGKDQPVVLHLLDIPPAMKALEGVAMELEDC---------AFPLLAGVVATT-   71 (323)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCc-ccCCCccEEEEEecCCcccccchHHHHHhhc---------cccccCCcEEec-
Confidence            45899999999999999999988763 34     688888754321111222221110         000001111111 


Q ss_pred             CCCCCCCCCCHHHHHHHhcCCcEEEEcCcccC-chHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        111 NLESEHLGLSEDSEQLIKSKVNIIFHCAASLR-FDEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       111 D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~-~~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                                  .....++++|+||-+||... ..++-.+.++.|......+.+...++
T Consensus        72 ------------~~~~~~~daDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~  118 (323)
T TIGR01759        72 ------------DPEEAFKDVDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKV  118 (323)
T ss_pred             ------------ChHHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence                        11234688999999999753 23566678999999999999988887

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=97.48  E-value=0.00076  Score=53.47  Aligned_cols=110  Identities=13%  Similarity=0.067  Sum_probs=66.9

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+|.|+|++|.+|..++..|+..|. ...|+++++.+..+.+.....++..     .+    ........+..   .   
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~-~~~v~lvd~~~~~~~l~~~~~dl~d-----~~----~~~~~~~~i~~---~---   64 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDV-VKEINLISRPKSLEKLKGLRLDIYD-----AL----AAAGIDAEIKI---S---   64 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCC-CCEEEEEECcccccccccccchhhh-----ch----hccCCCcEEEE---C---
Confidence            5899999999999999999999874 3468888985421111111111100     00    00000111111   1   


Q ss_pred             CCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        117 LGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       117 ~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                           .+.+ .++++|++|-++|.... .++-.+.++.|+.....+.+...+.
T Consensus        65 -----~d~~-~l~~aDiViitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~  111 (309)
T cd05294          65 -----SDLS-DVAGSDIVIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEF  111 (309)
T ss_pred             -----CCHH-HhCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence                 1123 37899999999996432 2344567888999999998887765

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=97.43  E-value=0.00063  Score=51.58  Aligned_cols=31  Identities=16%  Similarity=0.400  Sum_probs=24.1

Q ss_pred             eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEe
Q psy17489         38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   71 (177)
Q Consensus        38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r   71 (177)
                      +++=-.++|+||.++++.|.+.|   ++|+++++
T Consensus        17 R~itN~SSGgIG~AIA~~la~~G---a~Vvlv~~   47 (227)
T TIGR02114        17 RSITNHSTGHLGKIITETFLSAG---HEVTLVTT   47 (227)
T ss_pred             eeecCCcccHHHHHHHHHHHHCC---CEEEEEcC
Confidence            33334458899999999999999   57877765

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=97.42  E-value=0.0018  Score=51.70  Aligned_cols=110  Identities=12%  Similarity=0.075  Sum_probs=69.3

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcC-----eEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIG-----AIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS  110 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~-----~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  110 (177)
                      .++|.|+|++|.+|.+++..|+..|. +.     .++.++..+....+.-...++..-         ......++.... 
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~-~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~---------~~~~~~~~~i~~-   70 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEM-FGPDQPVILQLLELPQALKALEGVAMELEDC---------AFPLLAEIVITD-   70 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccc-cCCCCceEEEEEecCCcccccceeehhhhhc---------cccccCceEEec-
Confidence            46899999999999999999988764 34     688888754321111111111000         000001121111 


Q ss_pred             CCCCCCCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        111 NLESEHLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       111 D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                                  .....++++|+||-+||.... .++-.+.++.|+.....+.+...++
T Consensus        71 ------------~~~~~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~  117 (322)
T cd01338          71 ------------DPNVAFKDADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDV  117 (322)
T ss_pred             ------------CcHHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence                        113446899999999997432 3455678899999999999998887

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05442 malate dehydrogenase; Provisional

Probab=97.36  E-value=0.0029  Score=50.53  Aligned_cols=108  Identities=12%  Similarity=0.087  Sum_probs=69.9

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcC-----eEEEEEeCCCCCChH---HHHHHHHhhhhhhcccccCcccCCCeE
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIG-----AIYIMVRDKKGSSPE---ERVKNMLNSVIFDRLNKEVPDFRSKIQ  106 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~-----~v~~~~r~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~  106 (177)
                      +.++|.|+|++|.+|++++..|+..|. +.     .++.++..+....+.   ..+.+...            ....++.
T Consensus         3 ~~~KV~IiGaaG~VG~~~a~~l~~~~~-~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~------------~~~~~~~   69 (326)
T PRK05442          3 APVRVAVTGAAGQIGYSLLFRIASGDM-LGKDQPVILQLLEIPPALKALEGVVMELDDCAF------------PLLAGVV   69 (326)
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHhhhh-cCCCCccEEEEEecCCcccccceeehhhhhhhh------------hhcCCcE
Confidence            457999999999999999999987663 34     688888754321111   12222110            0001222


Q ss_pred             EEeCCCCCCCCCCCHHHHHHHhcCCcEEEEcCcccC-chHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        107 VIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLR-FDEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       107 ~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~-~~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                      ...             ...+.++++|+||-+||... ..++-.+.++.|......+.+...++
T Consensus        70 i~~-------------~~y~~~~daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~  119 (326)
T PRK05442         70 ITD-------------DPNVAFKDADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEV  119 (326)
T ss_pred             Eec-------------ChHHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            111             11234688999999999643 23566678899999999999988885

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=97.33  E-value=0.0053  Score=48.69  Aligned_cols=111  Identities=10%  Similarity=0.032  Sum_probs=70.8

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      ++|.|+|++|.+|++++..|...|. +..+++++.+ ........+.+                ........... .+  
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~-~~elvLiDi~-~a~g~alDL~~----------------~~~~~~i~~~~-~~--   59 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPL-VSELALYDIV-NTPGVAADLSH----------------INTPAKVTGYL-GP--   59 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC-CcEEEEEecC-ccceeehHhHh----------------CCCcceEEEec-CC--
Confidence            4799999999999999999988764 4578888875 11111011121                11111111100 11  


Q ss_pred             CCCCHHHHHHHhcCCcEEEEcCcccC-chHHHHHHHHHhHHHHHHHHHHHHhcCCCCCc
Q psy17489        117 LGLSEDSEQLIKSKVNIIFHCAASLR-FDEALQKAIRANLYATKQMLNLAKECVNLKRF  174 (177)
Q Consensus       117 ~~~~~~~~~~~~~~~d~vi~~aa~~~-~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~  174 (177)
                           +++-..++++|+||-+||... ..++-.+.++.|......+.+...++ +.+-+
T Consensus        60 -----~~~y~~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~-~p~a~  112 (310)
T cd01337          60 -----EELKKALKGADVVVIPAGVPRKPGMTRDDLFNINAGIVRDLATAVAKA-CPKAL  112 (310)
T ss_pred             -----CchHHhcCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeE
Confidence                 123455789999999999743 23456678899999999999888877 44433

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=97.23  E-value=0.00097  Score=53.45  Aligned_cols=38  Identities=16%  Similarity=0.311  Sum_probs=32.2

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      +++|+|.||+|++|..+++.|.+.|+.+.++..+.+..
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~   38 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASAR   38 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccc
Confidence            46899999999999999999999877666777777654

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.11  E-value=0.0065  Score=48.84  Aligned_cols=38  Identities=29%  Similarity=0.492  Sum_probs=32.3

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      ..+...+|+|.|+ |++|+++++.|...|.  .++..++.+
T Consensus        20 ~~L~~~~VlVvG~-GglGs~va~~La~aGv--g~i~lvD~D   57 (339)
T PRK07688         20 QKLREKHVLIIGA-GALGTANAEMLVRAGV--GKVTIVDRD   57 (339)
T ss_pred             HHhcCCcEEEECC-CHHHHHHHHHHHHcCC--CeEEEEeCC
Confidence            3467789999995 8999999999999984  788888875

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.10  E-value=0.0097  Score=47.10  Aligned_cols=105  Identities=11%  Similarity=0.152  Sum_probs=66.8

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCC-hHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSS-PEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      ++|.|.|+ |.+|+.++..|+..|. ..+++++++++.... ....+.+...            ...........   + 
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~-~~ei~l~D~~~~~~~~~a~dL~~~~~------------~~~~~~~i~~~---~-   62 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGI-ADELVLIDINEEKAEGEALDLEDALA------------FLPSPVKIKAG---D-   62 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEeCCcchhhHhHhhHHHHhh------------ccCCCeEEEcC---C-
Confidence            47899995 9999999999998874 237899998753211 1112211110            00112222211   1 


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                              .. .++++|+||.++|.... .++-.+.++.|..-...+.+..+++
T Consensus        63 --------~~-~l~~aDIVIitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~  107 (306)
T cd05291          63 --------YS-DCKDADIVVITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKAS  107 (306)
T ss_pred             --------HH-HhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence                    12 25789999999997432 3345567899999999999988876

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.08  E-value=0.00082  Score=45.78  Aligned_cols=35  Identities=23%  Similarity=0.590  Sum_probs=28.4

Q ss_pred             eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      +|.|+||+|++|..+++.|.+. +.+..+.+.+++.
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~h-p~~e~~~~~~~~~   35 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEH-PDFELVALVSSSR   35 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHT-STEEEEEEEESTT
T ss_pred             CEEEECCCCHHHHHHHHHHhcC-CCccEEEeeeecc
Confidence            5899999999999999999985 5665566666655

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.07  E-value=0.0033  Score=49.79  Aligned_cols=78  Identities=18%  Similarity=0.384  Sum_probs=52.3

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      ...++|-||+||.|..++++|...|.   +.....|+.      .++..+-..            -.++...+++.+  +
T Consensus         6 e~d~iiYGAtGy~G~lvae~l~~~g~---~~aLAgRs~------~kl~~l~~~------------LG~~~~~~p~~~--p   62 (382)
T COG3268           6 EYDIIIYGATGYAGGLVAEYLAREGL---TAALAGRSS------AKLDALRAS------------LGPEAAVFPLGV--P   62 (382)
T ss_pred             ceeEEEEccccchhHHHHHHHHHcCC---chhhccCCH------HHHHHHHHh------------cCccccccCCCC--H
Confidence            35799999999999999999999984   445556654      223222111            112233333322  3


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCcccC
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAASLR  142 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~  142 (177)
                            +.++....+..+|+||+|+..
T Consensus        63 ------~~~~~~~~~~~VVlncvGPyt   83 (382)
T COG3268          63 ------AALEAMASRTQVVLNCVGPYT   83 (382)
T ss_pred             ------HHHHHHHhcceEEEecccccc
Confidence                  678888889999999999864

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=97.01  E-value=0.011  Score=46.82  Aligned_cols=110  Identities=10%  Similarity=0.127  Sum_probs=69.5

Q ss_pred             eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChH-HHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPE-ERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      +|.|.|+ |.+|..++..|+..|. +..++.++..++....+ ..+.+...          .. ...++....+|.    
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~-~~elvL~Di~~~~a~g~a~DL~~~~~----------~~-~~~~~~i~~~~y----   63 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGL-FSEIVLIDVNEGVAEGEALDFHHATA----------LT-YSTNTKIRAGDY----   63 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEeCCcchhhHHHHHHHhhhc----------cC-CCCCEEEEECCH----
Confidence            4789997 9999999999998763 45788888865322111 12222110          00 001333333331    


Q ss_pred             CCCCHHHHHHHhcCCcEEEEcCcccCc-hHH--HHHHHHHhHHHHHHHHHHHHhcCCCCCc
Q psy17489        117 LGLSEDSEQLIKSKVNIIFHCAASLRF-DEA--LQKAIRANLYATKQMLNLAKECVNLKRF  174 (177)
Q Consensus       117 ~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~--~~~~~~~nv~~~~~ll~~~~~~~~~~~~  174 (177)
                               ..++++|+||-+||.... .++  -.+.++.|..-...+.+...++ +..-+
T Consensus        64 ---------~~~~~aDivvitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~-~p~~i  114 (307)
T cd05290          64 ---------DDCADADIIVITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKV-TKEAV  114 (307)
T ss_pred             ---------HHhCCCCEEEECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHh-CCCeE
Confidence                     235789999999997432 233  3568899999999999998887 44433

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=97.01  E-value=0.01  Score=47.09  Aligned_cols=111  Identities=12%  Similarity=0.055  Sum_probs=69.9

Q ss_pred             eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCC
Q psy17489         38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHL  117 (177)
Q Consensus        38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~  117 (177)
                      +|.|+|++|.+|++++..|...+. +..++++++.+..... ..+.+                ........... .+   
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~-~~elvL~Di~~a~g~a-~DL~~----------------~~~~~~i~~~~-~~---   58 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPY-VSELSLYDIAGAAGVA-ADLSH----------------IPTAASVKGFS-GE---   58 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCC-CcEEEEecCCCCcEEE-chhhc----------------CCcCceEEEec-CC---
Confidence            578999999999999999988763 3578888876511100 11111                00111111100 00   


Q ss_pred             CCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCce
Q psy17489        118 GLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKECVNLKRFC  175 (177)
Q Consensus       118 ~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v  175 (177)
                          +++...++++|+||-+||.... .++-.+.++.|+.-...+.+...++ +.+-++
T Consensus        59 ----~~~~~~~~daDivvitaG~~~~~g~~R~dll~~N~~I~~~i~~~i~~~-~p~~ii  112 (312)
T TIGR01772        59 ----EGLENALKGADVVVIPAGVPRKPGMTRDDLFNVNAGIVKDLVAAVAES-CPKAMI  112 (312)
T ss_pred             ----CchHHHcCCCCEEEEeCCCCCCCCccHHHHHHHhHHHHHHHHHHHHHh-CCCeEE
Confidence                1234567899999999997532 3455668899999999998888877 444333

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=96.99  E-value=0.014  Score=46.22  Aligned_cols=111  Identities=14%  Similarity=0.075  Sum_probs=69.5

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcC-eEEEEEeCCCCCChH-HHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIG-AIYIMVRDKKGSSPE-ERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~-~v~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      ++|.|+|+ |.+|+.++..|+.++.  . .++.++..+...+.. ..+.+...            ....+ ..+.+| .+
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~--~~el~LiDi~~~~~~G~a~DL~~~~~------------~~~~~-~~i~~~-~~   63 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGL--GSELVLIDINEEKAEGVALDLSHAAA------------PLGSD-VKITGD-GD   63 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccc--cceEEEEEcccccccchhcchhhcch------------hccCc-eEEecC-CC
Confidence            47999999 9999999999987764  4 888888874322111 11111100            00011 122222 11


Q ss_pred             CCCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCce
Q psy17489        115 EHLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKECVNLKRFC  175 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v  175 (177)
                                -..++++|+|+-.||.... .++-.+.++.|..-...+.+...++ ..+-+|
T Consensus        64 ----------y~~~~~aDiVvitAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~-~~d~iv  114 (313)
T COG0039          64 ----------YEDLKGADIVVITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKY-APDAIV  114 (313)
T ss_pred             ----------hhhhcCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh-CCCeEE
Confidence                      1235788999999987543 3466678899999999998888776 444443

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=96.90  E-value=0.021  Score=45.37  Aligned_cols=106  Identities=9%  Similarity=0.104  Sum_probs=67.0

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      ++|.|+|+ |.+|+.++..|+..|. ...++.++.+++.  +.-...++..-          ............      
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~-~~el~LiD~~~~~--~~g~a~Dl~~~----------~~~~~~~~v~~~------   63 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGL-ADELVLVDVVEDK--LKGEAMDLQHG----------SAFLKNPKIEAD------   63 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEeCCccH--HHHHHHHHHHh----------hccCCCCEEEEC------
Confidence            48999996 9999999999988863 4578888876532  11122222110          000011122210      


Q ss_pred             CCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        117 LGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       117 ~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                           .+++. ++++|+||-+||.... .++-.+.++.|+.-...+.+..+++
T Consensus        64 -----~dy~~-~~~adivvitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~  110 (312)
T cd05293          64 -----KDYSV-TANSKVVIVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKY  110 (312)
T ss_pred             -----CCHHH-hCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence                 11232 6899999999997443 3445567899999999898888877

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.90  E-value=0.0062  Score=50.51  Aligned_cols=73  Identities=16%  Similarity=0.323  Sum_probs=52.0

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+++|.|+ |.+|.++++.|.+.|   ..|+++++++.      .++....              ...+.++.+|..+. 
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g---~~v~vid~~~~------~~~~~~~--------------~~~~~~~~gd~~~~-   55 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGEN---NDVTVIDTDEE------RLRRLQD--------------RLDVRTVVGNGSSP-   55 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCC---CcEEEEECCHH------HHHHHHh--------------hcCEEEEEeCCCCH-
Confidence            57899986 999999999999988   57888887652      2222111              02467888888876 


Q ss_pred             CCCCHHHHHHH-hcCCcEEEEcCc
Q psy17489        117 LGLSEDSEQLI-KSKVNIIFHCAA  139 (177)
Q Consensus       117 ~~~~~~~~~~~-~~~~d~vi~~aa  139 (177)
                           ..+..+ ++++|.+|-+..
T Consensus        56 -----~~l~~~~~~~a~~vi~~~~   74 (453)
T PRK09496         56 -----DVLREAGAEDADLLIAVTD   74 (453)
T ss_pred             -----HHHHHcCCCcCCEEEEecC
Confidence                 566666 667888777654

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.88  E-value=0.018  Score=52.55  Aligned_cols=79  Identities=11%  Similarity=0.161  Sum_probs=55.5

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcC------------eEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIG------------AIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFR  102 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~------------~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      .+++|+|.|+ |++|+..++.|.+.. ++.            .|.+.+++.      +..+.+.+             ..
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~-~~~~~~~~~~~~~~~lV~VaD~~~------~~a~~la~-------------~~  626 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVK-TISYYGDDSEEPTDVHVIVASLYL------KDAKETVE-------------GI  626 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCc-CccccccccccccccEEEEECCCH------HHHHHHHH-------------hc
Confidence            4678999995 999999999998753 221            355555543      22222111             11


Q ss_pred             CCeEEEeCCCCCCCCCCCHHHHHHHhcCCcEEEEcCcc
Q psy17489        103 SKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAAS  140 (177)
Q Consensus       103 ~~v~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~  140 (177)
                      +++..+..|+.|.      +++..+++++|+||.+...
T Consensus       627 ~~~~~v~lDv~D~------e~L~~~v~~~DaVIsalP~  658 (1042)
T PLN02819        627 ENAEAVQLDVSDS------ESLLKYVSQVDVVISLLPA  658 (1042)
T ss_pred             CCCceEEeecCCH------HHHHHhhcCCCEEEECCCc
Confidence            3567889999988      7888888899999999876

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.84  E-value=0.015  Score=43.17  Aligned_cols=38  Identities=24%  Similarity=0.262  Sum_probs=32.3

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      ..+...+|+|.| .|.+|+++++.|...|.  .+++.++.+
T Consensus        17 ~kl~~~~VlviG-~GglGs~ia~~La~~Gv--~~i~lvD~d   54 (202)
T TIGR02356        17 QRLLNSHVLIIG-AGGLGSPAALYLAGAGV--GTIVIVDDD   54 (202)
T ss_pred             HHhcCCCEEEEC-CCHHHHHHHHHHHHcCC--CeEEEecCC
Confidence            346778999999 78899999999999984  788888876

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=96.83  E-value=0.023  Score=47.27  Aligned_cols=107  Identities=12%  Similarity=0.017  Sum_probs=69.1

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhh-------CCCcCeEEEEEeCCCCCChH-HHHHHHHhhhhhhcccccCcccCCCeE
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRS-------FPDIGAIYIMVRDKKGSSPE-ERVKNMLNSVIFDRLNKEVPDFRSKIQ  106 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~-------g~~~~~v~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~  106 (177)
                      +.-+|.|+|++|.+|.+++..|+..       |. +.+++.++++++....+ ..+.+...            ....++.
T Consensus        99 ~~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i-~~eLvliD~~~~~a~G~amDL~daa~------------~~~~~v~  165 (444)
T PLN00112         99 KLINVAVSGAAGMISNHLLFKLASGEVFGPDQPI-ALKLLGSERSKQALEGVAMELEDSLY------------PLLREVS  165 (444)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHhcccccCCCCc-ccEEEEEcCCcchhHHHHHHHHHhhh------------hhcCceE
Confidence            3458999999999999999999877       42 23678887765432211 12222110            0011222


Q ss_pred             EEeCCCCCCCCCCCHHHHHHHhcCCcEEEEcCcccC-chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        107 VIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLR-FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       107 ~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~-~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      +...|             -..++++|+||-.||... ..++-.+.++.|+.....+.+...+
T Consensus       166 i~~~~-------------ye~~kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~  214 (444)
T PLN00112        166 IGIDP-------------YEVFQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNE  214 (444)
T ss_pred             EecCC-------------HHHhCcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            22221             234688999999999743 2345667889999999999998888

>PTZ00117 malate dehydrogenase; Provisional

Probab=96.82  E-value=0.018  Score=45.93  Aligned_cols=108  Identities=15%  Similarity=0.186  Sum_probs=66.2

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      +.++|.|+|| |.+|+.++..+...|.  ..++.++.++....... + ++..   ....      .........   . 
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~--~~l~L~Di~~~~~~g~~-l-Dl~~---~~~~------~~~~~~i~~---~-   65 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNL--GDVVLYDVIKGVPQGKA-L-DLKH---FSTL------VGSNINILG---T-   65 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCC--CeEEEEECCCccchhHH-H-HHhh---hccc------cCCCeEEEe---C-
Confidence            4568999996 9999999999988774  57888888764322111 1 1100   0000      001111111   0 


Q ss_pred             CCCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        115 EHLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                             .+++ .++++|+||.+++.... .++..+.+..|..-...+.+...+.
T Consensus        66 -------~d~~-~l~~ADiVVitag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~  112 (319)
T PTZ00117         66 -------NNYE-DIKDSDVVVITAGVQRKEEMTREDLLTINGKIMKSVAESVKKY  112 (319)
T ss_pred             -------CCHH-HhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence                   1234 56899999999986442 2344567788887777777777765

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.77  E-value=0.0074  Score=43.62  Aligned_cols=39  Identities=18%  Similarity=0.226  Sum_probs=33.3

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..+++++++|.|+++.+|..+++.|.+.|   .+|+...|+.
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g---~~V~v~~r~~   78 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRN---ATVTVCHSKT   78 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCC---CEEEEEECCc
Confidence            45789999999997788999999999988   4788888763

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=96.69  E-value=0.007  Score=48.62  Aligned_cols=96  Identities=20%  Similarity=0.244  Sum_probs=55.7

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCC--------ChHHHHH--HHHhhhhhhcccccCccc
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGS--------SPEERVK--NMLNSVIFDRLNKEVPDF  101 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~--------~~~~~~~--~~~~~~~~~~~~~~~~~~  101 (177)
                      ..++.++|+|.|+ |.+|+++++.|...|.  .++.+++++.-..        ..++.+.  ........+++.+. . .
T Consensus        20 ~~L~~~~VlIiG~-GglGs~va~~La~aGv--g~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~i-n-p   94 (338)
T PRK12475         20 RKIREKHVLIVGA-GALGAANAEALVRAGI--GKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKI-N-S   94 (338)
T ss_pred             HhhcCCcEEEECC-CHHHHHHHHHHHHcCC--CEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHH-C-C
Confidence            3467789999995 6699999999999984  6888888763110        0000000  00000001111110 1 1


Q ss_pred             CCCeEEEeCCCCCCCCCCCHHHHHHHhcCCcEEEEcCc
Q psy17489        102 RSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAA  139 (177)
Q Consensus       102 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa  139 (177)
                      .-++..+..|++.       +.+..+++++|+||.+..
T Consensus        95 ~v~i~~~~~~~~~-------~~~~~~~~~~DlVid~~D  125 (338)
T PRK12475         95 EVEIVPVVTDVTV-------EELEELVKEVDLIIDATD  125 (338)
T ss_pred             CcEEEEEeccCCH-------HHHHHHhcCCCEEEEcCC
Confidence            1345556666653       456777889999999865

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.67  E-value=0.0083  Score=47.00  Aligned_cols=36  Identities=19%  Similarity=0.243  Sum_probs=31.7

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEe
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   71 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r   71 (177)
                      .++|++++|.|++|.+|+.++..|++.|   .+|+++.|
T Consensus       156 ~l~Gk~vvViG~gg~vGkpia~~L~~~g---atVtv~~~  191 (283)
T PRK14192        156 ELAGKHAVVVGRSAILGKPMAMMLLNAN---ATVTICHS  191 (283)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHhCC---CEEEEEeC
Confidence            4689999999999999999999999987   57777666

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.61  E-value=0.013  Score=44.30  Aligned_cols=75  Identities=19%  Similarity=0.298  Sum_probs=54.9

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+++|.| .|-+|.++++.|.+.|   +.|+.+++++      ++..+...             .......+.+|-+++ 
T Consensus         1 m~iiIiG-~G~vG~~va~~L~~~g---~~Vv~Id~d~------~~~~~~~~-------------~~~~~~~v~gd~t~~-   56 (225)
T COG0569           1 MKIIIIG-AGRVGRSVARELSEEG---HNVVLIDRDE------ERVEEFLA-------------DELDTHVVIGDATDE-   56 (225)
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhCC---CceEEEEcCH------HHHHHHhh-------------hhcceEEEEecCCCH-
Confidence            4677777 7889999999999999   5888888875      33332111             113567889999998 


Q ss_pred             CCCCHHHHHHH-hcCCcEEEEcCcc
Q psy17489        117 LGLSEDSEQLI-KSKVNIIFHCAAS  140 (177)
Q Consensus       117 ~~~~~~~~~~~-~~~~d~vi~~aa~  140 (177)
                           +.++++ +.++|+++-.-+.
T Consensus        57 -----~~L~~agi~~aD~vva~t~~   76 (225)
T COG0569          57 -----DVLEEAGIDDADAVVAATGN   76 (225)
T ss_pred             -----HHHHhcCCCcCCEEEEeeCC
Confidence                 667776 5688999887664

>PLN02602 lactate dehydrogenase

Probab=96.59  E-value=0.054  Score=43.76  Aligned_cols=104  Identities=9%  Similarity=0.155  Sum_probs=66.8

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCCh-HHHHHHHHhhhhhhcccccCcccCCCeEEEe-CCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSP-EERVKNMLNSVIFDRLNKEVPDFRSKIQVIP-SNLES  114 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~D~~~  114 (177)
                      ++|.|+|+ |.+|++++..|+..|. ...++.++.+++.... ...+.+...             ......+.. .|   
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l-~~el~LiDi~~~~~~g~a~DL~~~~~-------------~~~~~~i~~~~d---   99 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDL-ADELALVDVNPDKLRGEMLDLQHAAA-------------FLPRTKILASTD---   99 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCCCchhhHHHHHHHhhhh-------------cCCCCEEEeCCC---
Confidence            69999996 9999999999988764 4578888886532111 112222110             011122221 12   


Q ss_pred             CCCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        115 EHLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                               ++ .++++|+||-+||.... .++-.+.+..|+.-...+.+..+++
T Consensus       100 ---------y~-~~~daDiVVitAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~  144 (350)
T PLN02602        100 ---------YA-VTAGSDLCIVTAGARQIPGESRLNLLQRNVALFRKIIPELAKY  144 (350)
T ss_pred             ---------HH-HhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence                     22 26889999999997432 2345567888999988888888776

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.57  E-value=0.035  Score=42.91  Aligned_cols=106  Identities=14%  Similarity=0.094  Sum_probs=65.8

Q ss_pred             EEEecCCcchHHHHHHHHHhhCC-CcCeEEEEEeCCCCCC-hHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         39 ILVTGGTGFMGKLLIDKLLRSFP-DIGAIYIMVRDKKGSS-PEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        39 vlVtG~~G~iG~~l~~~L~~~g~-~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      +.|+|++|.+|..++..|+..|. ...+++.++.++.... ....+.+....            . ....+..   +   
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~------------~-~~~~i~~---~---   61 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEP------------L-ADIKVSI---T---   61 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhh------------c-cCcEEEE---C---
Confidence            47999989999999999998761 2358888888663322 11222222110            0 0111111   1   


Q ss_pred             CCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        117 LGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       117 ~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                           .+....++++|+||..++.... .++.......|+.....+.+..++.
T Consensus        62 -----~d~~~~~~~aDiVv~t~~~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~  109 (263)
T cd00650          62 -----DDPYEAFKDADVVIITAGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKY  109 (263)
T ss_pred             -----CchHHHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence                 2245567899999999987543 2233446677888888888887765

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=96.56  E-value=0.011  Score=47.50  Aligned_cols=36  Identities=25%  Similarity=0.361  Sum_probs=29.4

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEe
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   71 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r   71 (177)
                      +++|.|+||||++|..+++.|.+.++.+..+..+..
T Consensus         4 ~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s   39 (336)
T PRK05671          4 PLDIAVVGATGTVGEALVQILEERDFPVGTLHLLAS   39 (336)
T ss_pred             CCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEEC
Confidence            368999999999999999999987666666666544

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=96.55  E-value=0.039  Score=45.13  Aligned_cols=109  Identities=13%  Similarity=0.088  Sum_probs=66.1

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcC-----eEEEE--EeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEE
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIG-----AIYIM--VRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQV  107 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~-----~v~~~--~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  107 (177)
                      +.-+|.|+|++|.+|++++..|+..|. +.     .++.+  +++.+.  ++-...++...         ......++..
T Consensus        43 ~p~KV~IIGAaG~VG~~~A~~l~~~~l-~~~~~ei~L~L~diD~~~~~--a~g~a~DL~d~---------a~~~~~~v~i  110 (387)
T TIGR01757        43 KTVNVAVSGAAGMISNHLLFMLASGEV-FGQDQPIALKLLGSERSKEA--LEGVAMELEDS---------LYPLLREVSI  110 (387)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHhccc-cCCCCceEEEEeccCccchh--hhHHHHHHHHh---------hhhhcCceEE
Confidence            356899999999999999999998764 22     12222  443321  22222222110         0000112222


Q ss_pred             EeCCCCCCCCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        108 IPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       108 ~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                      ...|             -..++++|+||-.||.... .++-.+.++.|+.....+.+...++
T Consensus       111 ~~~~-------------y~~~kdaDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~  159 (387)
T TIGR01757       111 GIDP-------------YEVFEDADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAV  159 (387)
T ss_pred             ecCC-------------HHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            2211             2346899999999997432 3456678899999999999988885

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.50  E-value=0.03  Score=41.65  Aligned_cols=39  Identities=15%  Similarity=0.191  Sum_probs=32.1

Q ss_pred             ccccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         30 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        30 ~~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      ++-.+++++++|.|| |-+|...++.|++.|   ++|+++++.
T Consensus         4 l~l~l~~k~vLVIGg-G~va~~ka~~Ll~~g---a~V~VIs~~   42 (202)
T PRK06718          4 LMIDLSNKRVVIVGG-GKVAGRRAITLLKYG---AHIVVISPE   42 (202)
T ss_pred             eEEEcCCCEEEEECC-CHHHHHHHHHHHHCC---CeEEEEcCC
Confidence            344578999999995 899999999999998   577777653

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.47  E-value=0.025  Score=46.89  Aligned_cols=36  Identities=17%  Similarity=0.159  Sum_probs=31.3

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      +++++++|+|++| +|..+++.|.+.|   ++|++.+++.
T Consensus         3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G---~~V~~~d~~~   38 (447)
T PRK02472          3 YQNKKVLVLGLAK-SGYAAAKLLHKLG---ANVTVNDGKP   38 (447)
T ss_pred             cCCCEEEEEeeCH-HHHHHHHHHHHCC---CEEEEEcCCC
Confidence            4688999999988 9999999999999   6888887654

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=96.47  E-value=0.0059  Score=49.08  Aligned_cols=36  Identities=19%  Similarity=0.396  Sum_probs=29.2

Q ss_pred             eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      +|.|.||+|++|..+++.|.+.++.+..+..+.+..
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~   36 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDR   36 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccc
Confidence            478999999999999999998877666666665543

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=96.47  E-value=0.042  Score=43.58  Aligned_cols=105  Identities=12%  Similarity=0.162  Sum_probs=65.7

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+|.|.|+ |.+|..++..|+..|. +..|+++++++....  ....++...          ............      
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~-~~ev~l~D~~~~~~~--g~a~dl~~~----------~~~~~~~~i~~~------   60 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGL-ASEIVLVDINKAKAE--GEAMDLAHG----------TPFVKPVRIYAG------   60 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCC-CCEEEEEECCchhhh--hHHHHHHcc----------ccccCCeEEeeC------
Confidence            47899997 9999999999999873 357888888653211  111111110          000011111111      


Q ss_pred             CCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        117 LGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       117 ~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                            .+ ..++++|++|-+++.... .++..+....|+.....+.+.++++
T Consensus        61 ------d~-~~l~~aDiViita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~  106 (308)
T cd05292          61 ------DY-ADCKGADVVVITAGANQKPGETRLDLLKRNVAIFKEIIPQILKY  106 (308)
T ss_pred             ------CH-HHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence                  12 236899999999996432 3445567888988888888887776

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.46  E-value=0.015  Score=45.52  Aligned_cols=37  Identities=16%  Similarity=0.231  Sum_probs=32.4

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      .++|++++|+|+++.+|..++..|.+.|   ++|+++.++
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~g---atVtv~~s~  191 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKN---ASVTILHSR  191 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCC---CeEEEEeCC
Confidence            4789999999999999999999999988   677777654

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.46  E-value=0.13  Score=35.53  Aligned_cols=93  Identities=22%  Similarity=0.344  Sum_probs=52.9

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC-----CCC---hHHHHHHHHhhhhhhcccccCcccCCCeEE
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK-----GSS---PEERVKNMLNSVIFDRLNKEVPDFRSKIQV  107 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~-----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  107 (177)
                      .++|+|.| .|.+|+.+++.|...|.  .++..++.+.-     ...   ..+.+-....+...+++.+..  ...++..
T Consensus         2 ~~~v~iiG-~G~vGs~va~~L~~~Gv--~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~n--p~~~v~~   76 (135)
T PF00899_consen    2 NKRVLIIG-AGGVGSEVAKNLARSGV--GKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEIN--PDVEVEA   76 (135)
T ss_dssp             T-EEEEES-TSHHHHHHHHHHHHHTT--SEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHS--TTSEEEE
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHHhCC--CceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhc--Cceeeee
Confidence            46899998 68899999999999984  78888876410     000   000000000000111111111  1234566


Q ss_pred             EeCCCCCCCCCCCHHHHHHHhcCCcEEEEcCcc
Q psy17489        108 IPSNLESEHLGLSEDSEQLIKSKVNIIFHCAAS  140 (177)
Q Consensus       108 ~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~  140 (177)
                      +..++..       +.....++++|+||.+...
T Consensus        77 ~~~~~~~-------~~~~~~~~~~d~vi~~~d~  102 (135)
T PF00899_consen   77 IPEKIDE-------ENIEELLKDYDIVIDCVDS  102 (135)
T ss_dssp             EESHCSH-------HHHHHHHHTSSEEEEESSS
T ss_pred             eeccccc-------ccccccccCCCEEEEecCC
Confidence            6666633       5677778899999998664

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK08223 hypothetical protein; Validated

Probab=96.41  E-value=0.043  Score=43.00  Aligned_cols=96  Identities=14%  Similarity=0.134  Sum_probs=55.6

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCC-----C---hHHHHHHHHhhhhhhcccccCcccCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGS-----S---PEERVKNMLNSVIFDRLNKEVPDFRS  103 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~-----~---~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      ..++..+|+|.| .|++|+++++.|...|.  .++..++.+.-..     +   ..+.+-+...+...+++.+. + ..-
T Consensus        23 ~kL~~s~VlIvG-~GGLGs~va~~LA~aGV--G~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~i-N-P~v   97 (287)
T PRK08223         23 QRLRNSRVAIAG-LGGVGGIHLLTLARLGI--GKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDI-N-PEL   97 (287)
T ss_pred             HHHhcCCEEEEC-CCHHHHHHHHHHHHhCC--CeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHH-C-CCC
Confidence            346778999999 67799999999999984  7888887652110     0   01111111111111122111 1 113


Q ss_pred             CeEEEeCCCCCCCCCCCHHHHHHHhcCCcEEEEcCc
Q psy17489        104 KIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAA  139 (177)
Q Consensus       104 ~v~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa  139 (177)
                      +++.+...++.       +....+++++|+|+.+.-
T Consensus        98 ~V~~~~~~l~~-------~n~~~ll~~~DlVvD~~D  126 (287)
T PRK08223         98 EIRAFPEGIGK-------ENADAFLDGVDVYVDGLD  126 (287)
T ss_pred             EEEEEecccCc-------cCHHHHHhCCCEEEECCC
Confidence            45555555554       346777889999997754

>PRK06223 malate dehydrogenase; Reviewed

Probab=96.40  E-value=0.047  Score=43.12  Aligned_cols=107  Identities=12%  Similarity=0.083  Sum_probs=62.9

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +++|.|+|+ |.+|..++..+...|.  ..|++.++++...+  ....++... .        ...........   +  
T Consensus         2 ~~KI~VIGa-G~vG~~ia~~la~~~~--~ev~L~D~~~~~~~--~~~~dl~~~-~--------~~~~~~~~i~~---~--   62 (307)
T PRK06223          2 RKKISIIGA-GNVGATLAHLLALKEL--GDVVLFDIVEGVPQ--GKALDIAEA-A--------PVEGFDTKITG---T--   62 (307)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC--eEEEEEECCCchhH--HHHHHHHhh-h--------hhcCCCcEEEe---C--
Confidence            479999998 9999999999998874  28888888654321  111111110 0        00000111111   0  


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCcccC-chHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAASLR-FDEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~-~~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                            .+++ .++++|+||.+++... ...+-.+.+.-|+.....+.+...+.
T Consensus        63 ------~d~~-~~~~aDiVii~~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~  109 (307)
T PRK06223         63 ------NDYE-DIAGSDVVVITAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKY  109 (307)
T ss_pred             ------CCHH-HHCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence                  1232 3689999999987533 22333455677777777777776665

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.39  E-value=0.047  Score=44.50  Aligned_cols=37  Identities=22%  Similarity=0.232  Sum_probs=31.3

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      .+.+++|+|.| .|++|++++..|...|.  .+++.++++
T Consensus       132 ~l~~~~VlvvG-~GG~Gs~ia~~La~~Gv--g~i~lvD~d  168 (376)
T PRK08762        132 RLLEARVLLIG-AGGLGSPAALYLAAAGV--GTLGIVDHD  168 (376)
T ss_pred             HHhcCcEEEEC-CCHHHHHHHHHHHHcCC--CeEEEEeCC
Confidence            46778899997 57899999999999984  788888875

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=96.38  E-value=0.019  Score=40.37  Aligned_cols=37  Identities=19%  Similarity=0.216  Sum_probs=30.7

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .++++++|+|+ |.+|..+++.|.+.|  ...|++.+|+.
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g--~~~v~v~~r~~   53 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELG--AAKIVIVNRTL   53 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCC--CCEEEEEcCCH
Confidence            45789999997 899999999999885  25788888764

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>cd05295 MDH_like Malate dehydrogenase-like

Probab=96.33  E-value=0.067  Score=44.59  Aligned_cols=113  Identities=14%  Similarity=0.024  Sum_probs=67.1

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHh---hCCCc-CeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEe
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLR---SFPDI-GAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIP  109 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~---~g~~~-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  109 (177)
                      .+.-+|+||||+|.||.+|+..+.+   .|.+. -.++.++..+....++-..-++..- .        .....++....
T Consensus       121 ~~p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~-a--------~pll~~v~i~~  191 (452)
T cd05295         121 INPLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDL-A--------FPLLRGISVTT  191 (452)
T ss_pred             CCceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHh-H--------HhhcCCcEEEE
Confidence            3456899999999999999999986   23221 1344444432222222222222110 0        00011222221


Q ss_pred             CCCCCCCCCCCHHHHHHHhcCCcEEEEcCcccC-chHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        110 SNLESEHLGLSEDSEQLIKSKVNIIFHCAASLR-FDEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       110 ~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~-~~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                          +         ....++++|++|-.||... ..++-.+.++.|...+..+.+...++
T Consensus       192 ----~---------~~ea~~daDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~  238 (452)
T cd05295         192 ----D---------LDVAFKDAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKN  238 (452)
T ss_pred             ----C---------CHHHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence                1         1345789999999999743 23455668899999999998888876

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.30  E-value=0.02  Score=43.94  Aligned_cols=38  Identities=21%  Similarity=0.234  Sum_probs=32.1

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      ..++..+|+|.|+ |++|+.+++.|...|.  .++..++.+
T Consensus        28 ~~L~~~~VliiG~-GglGs~va~~La~~Gv--g~i~lvD~D   65 (245)
T PRK05690         28 EKLKAARVLVVGL-GGLGCAASQYLAAAGV--GTLTLVDFD   65 (245)
T ss_pred             HHhcCCeEEEECC-CHHHHHHHHHHHHcCC--CEEEEEcCC
Confidence            3567889999997 9999999999999884  788888765

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.28  E-value=0.042  Score=36.63  Aligned_cols=70  Identities=17%  Similarity=0.286  Sum_probs=49.6

Q ss_pred             EEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCCC
Q psy17489         39 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLG  118 (177)
Q Consensus        39 vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~  118 (177)
                      ++|.|. |-+|..+++.|.+.+   ..|+++++++      +..+....               ..+.++.+|.+++   
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~---~~vvvid~d~------~~~~~~~~---------------~~~~~i~gd~~~~---   52 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGG---IDVVVIDRDP------ERVEELRE---------------EGVEVIYGDATDP---   52 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTT---SEEEEEESSH------HHHHHHHH---------------TTSEEEES-TTSH---
T ss_pred             eEEEcC-CHHHHHHHHHHHhCC---CEEEEEECCc------HHHHHHHh---------------cccccccccchhh---
Confidence            567775 679999999999965   5888888865      33333322               3478999999998   


Q ss_pred             CCHHHHHHH-hcCCcEEEEcCc
Q psy17489        119 LSEDSEQLI-KSKVNIIFHCAA  139 (177)
Q Consensus       119 ~~~~~~~~~-~~~~d~vi~~aa  139 (177)
                         +.++++ +++++.++-+..
T Consensus        53 ---~~l~~a~i~~a~~vv~~~~   71 (116)
T PF02254_consen   53 ---EVLERAGIEKADAVVILTD   71 (116)
T ss_dssp             ---HHHHHTTGGCESEEEEESS
T ss_pred             ---hHHhhcCccccCEEEEccC
Confidence               666664 457888887755

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=96.27  E-value=0.0097  Score=48.58  Aligned_cols=37  Identities=30%  Similarity=0.504  Sum_probs=30.0

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      +.++|.|.||+|++|..+++.|.++ +. .++..+.++.
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~h-P~-~el~~l~s~~   73 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANH-PD-FEITVMTADR   73 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhC-CC-CeEEEEEChh
Confidence            4568999999999999999999887 22 5777777643

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.27  E-value=0.0094  Score=44.30  Aligned_cols=95  Identities=12%  Similarity=0.169  Sum_probs=54.9

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC---CCCCCh----HHHHHHHHhhhhhhcccccCcccCCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD---KKGSSP----EERVKNMLNSVIFDRLNKEVPDFRSK  104 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~---~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ..+..++|+|.|+ |.+|+.+++.|...|.  .+++..+.+   ......    .+.+-+.......+++.+.-+  ..+
T Consensus        17 ~~L~~~~V~IvG~-GglGs~ia~~La~~Gv--g~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp--~~~   91 (200)
T TIGR02354        17 QKLEQATVAICGL-GGLGSNVAINLARAGI--GKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINP--YTE   91 (200)
T ss_pred             HHHhCCcEEEECc-CHHHHHHHHHHHHcCC--CEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCC--CCE
Confidence            4467789999995 7799999999999984  678888876   221111    011110001111111111111  123


Q ss_pred             eEEEeCCCCCCCCCCCHHHHHHHhcCCcEEEEcC
Q psy17489        105 IQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCA  138 (177)
Q Consensus       105 v~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a  138 (177)
                      +..+..+++.       +.+..+++++|+||.+.
T Consensus        92 i~~~~~~i~~-------~~~~~~~~~~DlVi~a~  118 (200)
T TIGR02354        92 IEAYDEKITE-------ENIDKFFKDADIVCEAF  118 (200)
T ss_pred             EEEeeeeCCH-------hHHHHHhcCCCEEEECC
Confidence            4445555543       45677788999999983

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.27  E-value=0.044  Score=41.92  Aligned_cols=39  Identities=18%  Similarity=0.263  Sum_probs=32.1

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..+++.+|+|.| .|++|+.+++.|...|.  .+++.++.+.
T Consensus        20 ~~L~~~~VlvvG-~GglGs~va~~La~~Gv--g~i~lvD~D~   58 (240)
T TIGR02355        20 EALKASRVLIVG-LGGLGCAASQYLAAAGV--GNLTLLDFDT   58 (240)
T ss_pred             HHHhCCcEEEEC-cCHHHHHHHHHHHHcCC--CEEEEEeCCc
Confidence            346678999998 67899999999999884  7888887753

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=96.23  E-value=0.016  Score=46.68  Aligned_cols=36  Identities=14%  Similarity=0.226  Sum_probs=29.2

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEe
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   71 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r   71 (177)
                      .++|.|.||+|++|..+++.|.+.++.+..+..+..
T Consensus         7 ~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las   42 (344)
T PLN02383          7 GPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLAS   42 (344)
T ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEc
Confidence            468999999999999999999987765556655543

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.18  E-value=0.038  Score=43.42  Aligned_cols=38  Identities=11%  Similarity=0.057  Sum_probs=30.9

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~   74 (177)
                      ..+++++|.|+ |+.+++++..|...|.  .+|++.+|+..
T Consensus       122 ~~~k~vlvlGa-GGaarAi~~~l~~~g~--~~i~i~nRt~~  159 (288)
T PRK12749        122 IKGKTMVLLGA-GGASTAIGAQGAIEGL--KEIKLFNRRDE  159 (288)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCC--CEEEEEeCCcc
Confidence            46789999996 4458999999998874  78999999753

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.17  E-value=0.075  Score=43.02  Aligned_cols=38  Identities=26%  Similarity=0.259  Sum_probs=31.8

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      ..++..+|+|.|+ |++|+++++.|...|.  .++..++.+
T Consensus        24 ~~L~~~~VlivG~-GGlGs~~a~~La~~Gv--g~i~lvD~D   61 (355)
T PRK05597         24 QSLFDAKVAVIGA-GGLGSPALLYLAGAGV--GHITIIDDD   61 (355)
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHHcCC--CeEEEEeCC
Confidence            3467789999995 8899999999999884  788888775

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=96.12  E-value=0.033  Score=39.93  Aligned_cols=36  Identities=22%  Similarity=0.250  Sum_probs=28.3

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEe
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   71 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r   71 (177)
                      .++||+++|.|.+..+|..++..|.++|   ..|.....
T Consensus        33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~---atVt~~h~   68 (160)
T PF02882_consen   33 DLEGKKVVVVGRSNIVGKPLAMLLLNKG---ATVTICHS   68 (160)
T ss_dssp             STTT-EEEEE-TTTTTHHHHHHHHHHTT----EEEEE-T
T ss_pred             CCCCCEEEEECCcCCCChHHHHHHHhCC---CeEEeccC
Confidence            4789999999999999999999999998   67766544

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=96.10  E-value=0.19  Score=40.07  Aligned_cols=109  Identities=12%  Similarity=0.096  Sum_probs=65.8

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      .+.++|.|+| .|.+|+.++..++..|.  ..++.++.++.....  ...+....  .       ........+...   
T Consensus         4 ~~~~KI~IIG-aG~vG~~ia~~la~~gl--~~i~LvDi~~~~~~~--~~ld~~~~--~-------~~~~~~~~I~~~---   66 (321)
T PTZ00082          4 IKRRKISLIG-SGNIGGVMAYLIVLKNL--GDVVLFDIVKNIPQG--KALDISHS--N-------VIAGSNSKVIGT---   66 (321)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCCC--CeEEEEeCCCchhhH--HHHHHHhh--h-------hccCCCeEEEEC---
Confidence            4557999999 59999999999988874  468888887653211  11111100  0       000011222210   


Q ss_pred             CCCCCCCHHHHHHHhcCCcEEEEcCcccCc-hH-----HHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        114 SEHLGLSEDSEQLIKSKVNIIFHCAASLRF-DE-----ALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~-----~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                              .+++ .++++|+||.+++.... .+     +..+.+..|+.-...+.+...+.
T Consensus        67 --------~d~~-~l~~aDiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~  118 (321)
T PTZ00082         67 --------NNYE-DIAGSDVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKY  118 (321)
T ss_pred             --------CCHH-HhCCCCEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence                    1122 46899999999986432 12     34556777888777777777765

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=96.09  E-value=0.14  Score=37.92  Aligned_cols=37  Identities=27%  Similarity=0.375  Sum_probs=30.7

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      .++..+|+|.|++| +|.++++.|...|.  .++..++.+
T Consensus        18 ~L~~s~VlIiG~gg-lG~evak~La~~GV--g~i~lvD~d   54 (197)
T cd01492          18 RLRSARILLIGLKG-LGAEIAKNLVLSGI--GSLTILDDR   54 (197)
T ss_pred             HHHhCcEEEEcCCH-HHHHHHHHHHHcCC--CEEEEEECC
Confidence            45678999998665 99999999999984  788888765

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.09  E-value=0.055  Score=42.48  Aligned_cols=37  Identities=14%  Similarity=0.199  Sum_probs=32.1

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .+.+++++|+|. |.+|..+++.|...|   .+|++.+|+.
T Consensus       148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G---~~V~v~~R~~  184 (287)
T TIGR02853       148 TIHGSNVMVLGF-GRTGMTIARTFSALG---ARVFVGARSS  184 (287)
T ss_pred             CCCCCEEEEEcC-hHHHHHHHHHHHHCC---CEEEEEeCCH
Confidence            567899999996 779999999999988   5888888865

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.07  E-value=0.024  Score=42.91  Aligned_cols=38  Identities=21%  Similarity=0.338  Sum_probs=31.2

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      ..+...+|+|.| .|.+|+++++.|...|.  .+++.++.+
T Consensus        17 ~~L~~~~VlivG-~GglGs~va~~La~~Gv--g~i~lvD~D   54 (228)
T cd00757          17 EKLKNARVLVVG-AGGLGSPAAEYLAAAGV--GKLGLVDDD   54 (228)
T ss_pred             HHHhCCcEEEEC-CCHHHHHHHHHHHHcCC--CEEEEEcCC
Confidence            346678999999 78899999999999984  788877654

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.05  E-value=0.027  Score=42.23  Aligned_cols=38  Identities=21%  Similarity=0.295  Sum_probs=31.9

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      ..+...+|+|.| .|.+|+.+++.|...|.  .+++.++.+
T Consensus        24 ~~L~~~~V~ViG-~GglGs~ia~~La~~Gv--g~i~lvD~D   61 (212)
T PRK08644         24 EKLKKAKVGIAG-AGGLGSNIAVALARSGV--GNLKLVDFD   61 (212)
T ss_pred             HHHhCCCEEEEC-cCHHHHHHHHHHHHcCC--CeEEEEeCC
Confidence            346778999999 58899999999999984  678888776

>KOG1494|consensus

Probab=96.04  E-value=0.097  Score=40.81  Aligned_cols=102  Identities=16%  Similarity=0.162  Sum_probs=66.3

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      .+.+|.|.||.|+||+.|...| +..+-+......+-....                               -+..|++.
T Consensus        27 ~~~KVAvlGAaGGIGQPLSLLl-K~np~Vs~LaLYDi~~~~-------------------------------GVaaDlSH   74 (345)
T KOG1494|consen   27 RGLKVAVLGAAGGIGQPLSLLL-KLNPLVSELALYDIANTP-------------------------------GVAADLSH   74 (345)
T ss_pred             CcceEEEEecCCccCccHHHHH-hcCcccceeeeeecccCC-------------------------------cccccccc
Confidence            5679999999999999876555 444545444444432211                               11122211


Q ss_pred             CC-----CC-CCHHHHHHHhcCCcEEEEcCcccC-chHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        115 EH-----LG-LSEDSEQLIKSKVNIIFHCAASLR-FDEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       115 ~~-----~~-~~~~~~~~~~~~~d~vi~~aa~~~-~~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                      ..     .+ ...+.++.+++++|+|+=-||.-. ...+-++.|.+|.--...+..++.++
T Consensus        75 I~T~s~V~g~~g~~~L~~al~~advVvIPAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~  135 (345)
T KOG1494|consen   75 INTNSSVVGFTGADGLENALKGADVVVIPAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKC  135 (345)
T ss_pred             cCCCCceeccCChhHHHHHhcCCCEEEecCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhh
Confidence            10     11 123688999999999999999754 23456678999988888888777665

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.03  E-value=0.09  Score=36.60  Aligned_cols=32  Identities=31%  Similarity=0.360  Sum_probs=26.9

Q ss_pred             eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      +++|.|+ |.+|+.+++.|...|.  .++..++.+
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv--~~i~ivD~d   32 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGV--GKITLIDFD   32 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCC--CEEEEEcCC
Confidence            4788985 8999999999999985  678888764

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.98  E-value=0.064  Score=44.49  Aligned_cols=76  Identities=14%  Similarity=0.206  Sum_probs=52.4

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      ..++++|.|+ |.+|..+++.|.+.|   ..|+++++++      +.+.++..             ....+.++.+|.++
T Consensus       230 ~~~~iiIiG~-G~~g~~l~~~L~~~~---~~v~vid~~~------~~~~~~~~-------------~~~~~~~i~gd~~~  286 (453)
T PRK09496        230 PVKRVMIVGG-GNIGYYLAKLLEKEG---YSVKLIERDP------ERAEELAE-------------ELPNTLVLHGDGTD  286 (453)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCC---CeEEEEECCH------HHHHHHHH-------------HCCCCeEEECCCCC
Confidence            4688999996 999999999999988   5788887765      22322211             11356788899887


Q ss_pred             CCCCCCHHHHHHH-hcCCcEEEEcCc
Q psy17489        115 EHLGLSEDSEQLI-KSKVNIIFHCAA  139 (177)
Q Consensus       115 ~~~~~~~~~~~~~-~~~~d~vi~~aa  139 (177)
                      .      +.+.++ +++++.+|-+..
T Consensus       287 ~------~~L~~~~~~~a~~vi~~~~  306 (453)
T PRK09496        287 Q------ELLEEEGIDEADAFIALTN  306 (453)
T ss_pred             H------HHHHhcCCccCCEEEECCC
Confidence            7      455443 357788775544

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=95.96  E-value=0.04  Score=45.52  Aligned_cols=39  Identities=26%  Similarity=0.395  Sum_probs=33.0

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..+.+++++|.|+ |.+|..++..|...|.  ..+++..|+.
T Consensus       177 ~~l~~kkvlviGa-G~~a~~va~~L~~~g~--~~I~V~nRt~  215 (414)
T PRK13940        177 DNISSKNVLIIGA-GQTGELLFRHVTALAP--KQIMLANRTI  215 (414)
T ss_pred             cCccCCEEEEEcC-cHHHHHHHHHHHHcCC--CEEEEECCCH
Confidence            3467899999996 9999999999999874  6888888874

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=95.94  E-value=0.044  Score=40.63  Aligned_cols=37  Identities=19%  Similarity=0.296  Sum_probs=31.0

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      .++..+|+|.|++| +|..+++.|...|.  .+++.++.+
T Consensus        16 ~L~~s~VlviG~gg-lGsevak~L~~~GV--g~i~lvD~d   52 (198)
T cd01485          16 KLRSAKVLIIGAGA-LGAEIAKNLVLAGI--DSITIVDHR   52 (198)
T ss_pred             HHhhCcEEEECCCH-HHHHHHHHHHHcCC--CEEEEEECC
Confidence            35678999999776 99999999999984  788888765

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK04148 hypothetical protein; Provisional

Probab=95.93  E-value=0.092  Score=36.45  Aligned_cols=72  Identities=15%  Similarity=0.147  Sum_probs=50.6

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      +++++++.|.+  .|.+++..|.+.|   ..|++++.++.      .+.....               ..+..+.+|+.+
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G---~~ViaIDi~~~------aV~~a~~---------------~~~~~v~dDlf~   69 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESG---FDVIVIDINEK------AVEKAKK---------------LGLNAFVDDLFN   69 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCC---CEEEEEECCHH------HHHHHHH---------------hCCeEEECcCCC
Confidence            45789999955  7888999999998   69999998763      2222111               246789999999


Q ss_pred             CCCCCCHHHHHHHhcCCcEEEEcCcc
Q psy17489        115 EHLGLSEDSEQLIKSKVNIIFHCAAS  140 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~~d~vi~~aa~  140 (177)
                      +.+        .+-+++|.|+-.--+
T Consensus        70 p~~--------~~y~~a~liysirpp   87 (134)
T PRK04148         70 PNL--------EIYKNAKLIYSIRPP   87 (134)
T ss_pred             CCH--------HHHhcCCEEEEeCCC
Confidence            852        234567777766443

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=95.91  E-value=0.13  Score=41.92  Aligned_cols=97  Identities=18%  Similarity=0.272  Sum_probs=56.0

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCC-----CC---hHHHHHHHHhhhhhhcccccCcccCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG-----SS---PEERVKNMLNSVIFDRLNKEVPDFRS  103 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~-----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      ..++..+|+|.| .|++|+++++.|...|.  .+++.++.+.-.     ++   ..+.+-........+++.+.-+  .-
T Consensus        37 ~~l~~~~VliiG-~GglG~~v~~~La~~Gv--g~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np--~v  111 (370)
T PRK05600         37 ERLHNARVLVIG-AGGLGCPAMQSLASAGV--GTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQP--DI  111 (370)
T ss_pred             HHhcCCcEEEEC-CCHHHHHHHHHHHHcCC--CEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCC--CC
Confidence            346778999999 67899999999999884  788888775210     00   0011111111111112211111  12


Q ss_pred             CeEEEeCCCCCCCCCCCHHHHHHHhcCCcEEEEcCcc
Q psy17489        104 KIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAAS  140 (177)
Q Consensus       104 ~v~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~  140 (177)
                      ++..+...++.       +....+++++|+||.+...
T Consensus       112 ~i~~~~~~i~~-------~~~~~~~~~~DlVid~~Dn  141 (370)
T PRK05600        112 RVNALRERLTA-------ENAVELLNGVDLVLDGSDS  141 (370)
T ss_pred             eeEEeeeecCH-------HHHHHHHhCCCEEEECCCC
Confidence            34445444443       4566778999999999764

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=95.90  E-value=0.054  Score=41.81  Aligned_cols=35  Identities=26%  Similarity=0.430  Sum_probs=25.6

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEE-EEeCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYI-MVRDK   73 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~-~~r~~   73 (177)
                      ++|.|+|++|.+|+.+++.+.+. .++ .+.. ++++.
T Consensus         2 mkV~IiG~~G~mG~~i~~~l~~~-~~~-elvav~d~~~   37 (257)
T PRK00048          2 IKVAVAGASGRMGRELIEAVEAA-EDL-ELVAAVDRPG   37 (257)
T ss_pred             cEEEEECCCCHHHHHHHHHHHhC-CCC-EEEEEEecCC
Confidence            58999999999999999888765 233 4444 44443

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=95.87  E-value=0.094  Score=40.00  Aligned_cols=114  Identities=13%  Similarity=0.222  Sum_probs=62.7

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC-----CCChHHHHHHHHhhhhhhcccccCcccCCCeEE
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK-----GSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQV  107 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  107 (177)
                      .++..+|+|.| -|++|+|.++.|.+.|.  .++..++-+.-     +.+... +...+.+...+.+.+......+..+.
T Consensus        27 kl~~~~V~VvG-iGGVGSw~veALaRsGi--g~itlID~D~v~vTN~NRQi~A-~~~~iGk~Kv~vm~eri~~InP~c~V  102 (263)
T COG1179          27 KLKQAHVCVVG-IGGVGSWAVEALARSGI--GRITLIDMDDVCVTNTNRQIHA-LLGDIGKPKVEVMKERIKQINPECEV  102 (263)
T ss_pred             HHhhCcEEEEe-cCchhHHHHHHHHHcCC--CeEEEEecccccccccchhhHh-hhhhcccHHHHHHHHHHHhhCCCceE
Confidence            35567899999 67899999999999984  67777765431     111100 10011111111111111112344444


Q ss_pred             EeC-CCCCCCCCCCHHHHHHHhc-CCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCC
Q psy17489        108 IPS-NLESEHLGLSEDSEQLIKS-KVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNL  171 (177)
Q Consensus       108 ~~~-D~~~~~~~~~~~~~~~~~~-~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~  171 (177)
                      ... |+-.+      +.+..++. +.|+||.+--.              +..-..|+.+|.++ ++
T Consensus       103 ~~~~~f~t~------en~~~~~~~~~DyvIDaiD~--------------v~~Kv~Li~~c~~~-ki  147 (263)
T COG1179         103 TAINDFITE------ENLEDLLSKGFDYVIDAIDS--------------VRAKVALIAYCRRN-KI  147 (263)
T ss_pred             eehHhhhCH------hHHHHHhcCCCCEEEEchhh--------------hHHHHHHHHHHHHc-CC
Confidence            332 33333      56666654 68999988432              34445688888887 55

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=95.86  E-value=0.031  Score=44.89  Aligned_cols=39  Identities=23%  Similarity=0.419  Sum_probs=31.1

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      .+.++|.|.||||++|..+++.|.+..+.+.++..+..+
T Consensus         2 ~~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~   40 (336)
T PRK08040          2 SEGWNIALLGATGAVGEALLELLAERQFPVGELYALASE   40 (336)
T ss_pred             CCCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEcc
Confidence            356799999999999999999999855555677666543

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=95.84  E-value=0.16  Score=36.92  Aligned_cols=40  Identities=18%  Similarity=0.125  Sum_probs=33.7

Q ss_pred             cccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489         31 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        31 ~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~   74 (177)
                      ...+.|+++.|.| .|-||+.+++.+...|   .+|+..+|+..
T Consensus        31 ~~~l~g~tvgIiG-~G~IG~~vA~~l~~fG---~~V~~~d~~~~   70 (178)
T PF02826_consen   31 GRELRGKTVGIIG-YGRIGRAVARRLKAFG---MRVIGYDRSPK   70 (178)
T ss_dssp             BS-STTSEEEEES-TSHHHHHHHHHHHHTT----EEEEEESSCH
T ss_pred             ccccCCCEEEEEE-EcCCcCeEeeeeecCC---ceeEEecccCC
Confidence            3457899999998 7999999999999998   69999998763

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=95.79  E-value=0.12  Score=40.90  Aligned_cols=106  Identities=12%  Similarity=0.056  Sum_probs=64.1

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      ++|.|.|+ |.+|..++..++..|.  ..|++++..+.....  ...+.... ..       . ...... +.  .+   
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~--~~VvlvDi~~~l~~g--~a~d~~~~-~~-------~-~~~~~~-i~--~t---   61 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKEL--ADLVLLDVVEGIPQG--KALDMYEA-SP-------V-GGFDTK-VT--GT---   61 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCC--CeEEEEeCCCChhHH--HHHhhhhh-hh-------c-cCCCcE-EE--ec---
Confidence            47899996 9999999999999874  368888885432211  11111110 00       0 000001 11  01   


Q ss_pred             CCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        117 LGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       117 ~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                           .++.. ++++|+||-+++.... .++-.+.+..|......+++...++
T Consensus        62 -----~d~~~-~~~aDiVIitag~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~  108 (305)
T TIGR01763        62 -----NNYAD-TANSDIVVITAGLPRKPGMSREDLLSMNAGIVREVTGRIMEH  108 (305)
T ss_pred             -----CCHHH-hCCCCEEEEcCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence                 12333 5789999999995432 2344457788999999888887766

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>KOG1198|consensus

Probab=95.76  E-value=0.037  Score=44.65  Aligned_cols=38  Identities=18%  Similarity=0.217  Sum_probs=29.5

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEe
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   71 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r   71 (177)
                      ....|+.+||.||+|.+|++.++.....|  ...|++..+
T Consensus       154 ~~~~g~~vLv~ggsggVG~~aiQlAk~~~--~~~v~t~~s  191 (347)
T KOG1198|consen  154 KLSKGKSVLVLGGSGGVGTAAIQLAKHAG--AIKVVTACS  191 (347)
T ss_pred             ccCCCCeEEEEeCCcHHHHHHHHHHHhcC--CcEEEEEcc
Confidence            34578899999999999999999888876  345555444

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=95.69  E-value=0.23  Score=38.66  Aligned_cols=38  Identities=32%  Similarity=0.463  Sum_probs=31.7

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      ..+.+.+|+|.| .|++|+++++.|.+.|.  .+++.++.+
T Consensus        26 ~kL~~s~VlVvG-~GGVGs~vae~Lar~GV--g~itLiD~D   63 (268)
T PRK15116         26 QLFADAHICVVG-IGGVGSWAAEALARTGI--GAITLIDMD   63 (268)
T ss_pred             HHhcCCCEEEEC-cCHHHHHHHHHHHHcCC--CEEEEEeCC
Confidence            346778999998 67899999999999984  788888765

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=95.67  E-value=0.13  Score=38.43  Aligned_cols=37  Identities=16%  Similarity=0.195  Sum_probs=31.0

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .+.|++++|.| +|.+|..-++.|++.|   ++|++++.+.
T Consensus         6 ~l~gk~vlVvG-gG~va~rk~~~Ll~~g---a~VtVvsp~~   42 (205)
T TIGR01470         6 NLEGRAVLVVG-GGDVALRKARLLLKAG---AQLRVIAEEL   42 (205)
T ss_pred             EcCCCeEEEEC-cCHHHHHHHHHHHHCC---CEEEEEcCCC
Confidence            36789999999 6889999999999998   6888777543

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=95.65  E-value=0.05  Score=45.65  Aligned_cols=35  Identities=14%  Similarity=0.212  Sum_probs=29.6

Q ss_pred             cCCCceEEEecC----------------CcchHHHHHHHHHhhCCCcCeEEEEE
Q psy17489         33 FYRDGQILVTGG----------------TGFMGKLLIDKLLRSFPDIGAIYIMV   70 (177)
Q Consensus        33 ~~~~~~vlVtG~----------------~G~iG~~l~~~L~~~g~~~~~v~~~~   70 (177)
                      .+.|++|+||+|                +|..|.+|++.+...|   +.|+.+.
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~G---A~VtlI~  303 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAG---AEVTLIS  303 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCC---CcEEEEe
Confidence            479999999997                4569999999999999   5777665

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.63  E-value=0.053  Score=42.45  Aligned_cols=37  Identities=16%  Similarity=0.104  Sum_probs=31.5

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      .++|++++|+|.+..+|..++..|++.|   ++|+...+.
T Consensus       156 ~l~Gk~vvViGrs~iVG~Pla~lL~~~~---atVtv~hs~  192 (285)
T PRK10792        156 DTYGLNAVVVGASNIVGRPMSLELLLAG---CTVTVCHRF  192 (285)
T ss_pred             CCCCCEEEEECCCcccHHHHHHHHHHCC---CeEEEEECC
Confidence            3679999999999999999999999887   677766543

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=95.59  E-value=0.1  Score=40.97  Aligned_cols=37  Identities=19%  Similarity=0.121  Sum_probs=31.1

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..+++++|.|+ |+.|++++..|...|.  .+|++++|+.
T Consensus       125 ~~~k~vlIlGa-GGaaraia~aL~~~G~--~~I~I~nR~~  161 (284)
T PRK12549        125 ASLERVVQLGA-GGAGAAVAHALLTLGV--ERLTIFDVDP  161 (284)
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCC--CEEEEECCCH
Confidence            46789999995 6699999999999873  6899998875

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=95.58  E-value=0.055  Score=43.60  Aligned_cols=34  Identities=21%  Similarity=0.294  Sum_probs=26.9

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEe
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   71 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r   71 (177)
                      +++|.|.||+|++|..+++.|.+.. . .+++++.+
T Consensus         2 m~kVaIiGAtG~vG~~l~~~L~~~p-~-~elv~v~~   35 (343)
T PRK00436          2 MIKVGIVGASGYTGGELLRLLLNHP-E-VEIVAVTS   35 (343)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHcCC-C-ceEEEEEC
Confidence            3689999999999999999998762 2 46655554

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.57  E-value=0.048  Score=43.01  Aligned_cols=38  Identities=16%  Similarity=0.261  Sum_probs=33.1

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .++||++.|.|.+|.+|..++..|++.|   ++|++..+..
T Consensus       156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~g---atVtv~~~~t  193 (301)
T PRK14194        156 DLTGKHAVVIGRSNIVGKPMAALLLQAH---CSVTVVHSRS  193 (301)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCC---CEEEEECCCC
Confidence            4689999999999999999999999998   6888776544

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=95.55  E-value=0.14  Score=41.98  Aligned_cols=37  Identities=24%  Similarity=0.292  Sum_probs=30.7

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      .++..+|+|.| .|++|+.+++.|...|.  .++..++.+
T Consensus        39 ~L~~~~VlviG-~GGlGs~va~~La~~Gv--g~i~lvD~D   75 (392)
T PRK07878         39 RLKNARVLVIG-AGGLGSPTLLYLAAAGV--GTLGIVEFD   75 (392)
T ss_pred             HHhcCCEEEEC-CCHHHHHHHHHHHHcCC--CeEEEECCC
Confidence            45678999999 67899999999999884  788877764

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=95.53  E-value=0.17  Score=38.56  Aligned_cols=37  Identities=27%  Similarity=0.352  Sum_probs=30.9

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      .++..+|+|.| .|++|+++++.|.+.|.  .+++.++.+
T Consensus         8 ~L~~~~VlVvG-~GGvGs~va~~Lar~GV--g~i~LvD~D   44 (231)
T cd00755           8 KLRNAHVAVVG-LGGVGSWAAEALARSGV--GKLTLIDFD   44 (231)
T ss_pred             HHhCCCEEEEC-CCHHHHHHHHHHHHcCC--CEEEEECCC
Confidence            35677899999 67899999999999984  788888764

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=95.51  E-value=0.083  Score=41.94  Aligned_cols=37  Identities=30%  Similarity=0.359  Sum_probs=31.0

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      +.+++++|.|+ |.+|..+++.|...|.  ..|++.+|+.
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~--~~V~v~~r~~  212 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGV--AEITIANRTY  212 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCC--CEEEEEeCCH
Confidence            57899999996 9999999999988653  6788888865

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>TIGR00518 alaDH alanine dehydrogenase

Probab=95.49  E-value=0.11  Score=42.26  Aligned_cols=35  Identities=17%  Similarity=0.242  Sum_probs=29.3

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .+.+++|+|+ |-+|...++.+...|   .+|++.+|+.
T Consensus       166 ~~~~VlViGa-G~vG~~aa~~a~~lG---a~V~v~d~~~  200 (370)
T TIGR00518       166 EPGDVTIIGG-GVVGTNAAKMANGLG---ATVTILDINI  200 (370)
T ss_pred             CCceEEEEcC-CHHHHHHHHHHHHCC---CeEEEEECCH
Confidence            4567999986 889999999999998   5788888764

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=95.47  E-value=0.061  Score=37.09  Aligned_cols=36  Identities=19%  Similarity=0.239  Sum_probs=28.4

Q ss_pred             EEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCC
Q psy17489         39 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG   75 (177)
Q Consensus        39 vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~   75 (177)
                      +.|.|+||.||+..+.-+.+.. +-.+|+++.-....
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~-d~f~v~~Lsa~~n~   36 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHP-DKFEVVALSAGSNI   36 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCT-TTEEEEEEEESSTH
T ss_pred             CEEEcCCcHHHHHHHHHHHhCC-CceEEEEEEcCCCH
Confidence            5799999999999999998874 44588887765443

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.46  E-value=0.075  Score=37.21  Aligned_cols=37  Identities=24%  Similarity=0.292  Sum_probs=32.2

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      .++|++++|.|.+.-+|..++..|.++|   .+|+...++
T Consensus        25 ~~~gk~v~VvGrs~~vG~pla~lL~~~g---atV~~~~~~   61 (140)
T cd05212          25 RLDGKKVLVVGRSGIVGAPLQCLLQRDG---ATVYSCDWK   61 (140)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEeCCC
Confidence            4689999999999999999999999988   677776643

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK06153 hypothetical protein; Provisional

Probab=95.46  E-value=0.087  Score=42.97  Aligned_cols=39  Identities=18%  Similarity=0.295  Sum_probs=32.6

Q ss_pred             cccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         31 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        31 ~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      ...+++.+|+|.| .|++|++++..|.+.|  +.++++++.+
T Consensus       171 q~kL~~~~VaIVG-~GG~GS~Va~~LAR~G--VgeI~LVD~D  209 (393)
T PRK06153        171 SAKLEGQRIAIIG-LGGTGSYILDLVAKTP--VREIHLFDGD  209 (393)
T ss_pred             HHHHhhCcEEEEc-CCccHHHHHHHHHHcC--CCEEEEECCC
Confidence            3457788999999 6779999999999998  4788888764

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=95.46  E-value=0.15  Score=40.26  Aligned_cols=37  Identities=22%  Similarity=0.178  Sum_probs=31.9

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .+.+++++|.|. |.+|..++..|...|   .+|++.+|+.
T Consensus       149 ~l~g~kvlViG~-G~iG~~~a~~L~~~G---a~V~v~~r~~  185 (296)
T PRK08306        149 TIHGSNVLVLGF-GRTGMTLARTLKALG---ANVTVGARKS  185 (296)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCC---CEEEEEECCH
Confidence            356899999995 779999999999998   5899888874

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.42  E-value=0.061  Score=42.14  Aligned_cols=35  Identities=23%  Similarity=0.285  Sum_probs=30.4

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEE
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV   70 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~   70 (177)
                      .+.|++++|.|.++.+|+.++..|.+.|   .+|+...
T Consensus       155 ~l~Gk~vvViGrs~iVGkPla~lL~~~~---atVt~~h  189 (285)
T PRK14189        155 PLRGAHAVVIGRSNIVGKPMAMLLLQAG---ATVTICH  189 (285)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCC---CEEEEec
Confidence            3689999999999999999999999987   6776543

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=95.41  E-value=0.043  Score=39.83  Aligned_cols=33  Identities=24%  Similarity=0.274  Sum_probs=27.4

Q ss_pred             eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      +|+|.| .|.+|+.+++.|...|.  .+++.++.+.
T Consensus         1 ~VlViG-~GglGs~ia~~La~~Gv--g~i~lvD~D~   33 (174)
T cd01487           1 KVGIAG-AGGLGSNIAVLLARSGV--GNLKLVDFDV   33 (174)
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCC--CeEEEEeCCE
Confidence            478888 58899999999999884  6788888753

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=95.40  E-value=0.073  Score=41.68  Aligned_cols=37  Identities=19%  Similarity=0.098  Sum_probs=31.4

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..+++++|.| +|+.|++++..|.+.|.  .+|+++.|+.
T Consensus       123 ~~~k~vlvlG-aGGaarai~~aL~~~G~--~~i~I~nRt~  159 (282)
T TIGR01809       123 LAGFRGLVIG-AGGTSRAAVYALASLGV--TDITVINRNP  159 (282)
T ss_pred             cCCceEEEEc-CcHHHHHHHHHHHHcCC--CeEEEEeCCH
Confidence            4678999998 58899999999999884  6899998875

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=95.37  E-value=0.051  Score=43.46  Aligned_cols=27  Identities=22%  Similarity=0.193  Sum_probs=24.4

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFP   61 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~   61 (177)
                      .|.++||+||+|.+|+..++.....|.
T Consensus       142 ~g~~VLV~gaaGgVG~~aiQlAk~~G~  168 (326)
T COG0604         142 PGETVLVHGAAGGVGSAAIQLAKALGA  168 (326)
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC
Confidence            378999999999999999999988883

>KOG1202|consensus

Probab=95.33  E-value=0.039  Score=50.77  Aligned_cols=120  Identities=20%  Similarity=0.274  Sum_probs=76.7

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChH-HHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPE-ERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      .|+++|+||-|+.|..++++|..+|.  ..++..+|+.-..-.. ..++.+..             .+..+..-..|++.
T Consensus      1768 eksYii~GGLGGFGLELaqWLi~RGa--r~lVLtSRsGirtGYQa~~vrrWr~-------------~GVqV~vsT~nitt 1832 (2376)
T KOG1202|consen 1768 EKSYIIVGGLGGFGLELAQWLIQRGA--RKLVLTSRSGIRTGYQALMVRRWRR-------------RGVQVQVSTSNITT 1832 (2376)
T ss_pred             cceEEEeccccchhHHHHHHHHhcCc--eEEEEeccccchhhHHHHHHHHHHh-------------cCeEEEEecccchh
Confidence            47899999999999999999999984  5677777875321111 12222111             12334444455555


Q ss_pred             CCCCCCHHHHHHHhc------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh-cCCCCCcee
Q psy17489        115 EHLGLSEDSEQLIKS------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE-CVNLKRFCE  176 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~-~~~~~~~v~  176 (177)
                      .      +....+++      .+..|+|.|+...       ..+++.+.-++.+.++.+|=+..++ ++.++-||+
T Consensus      1833 ~------~ga~~Li~~s~kl~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~ 1902 (2376)
T KOG1202|consen 1833 A------EGARGLIEESNKLGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVV 1902 (2376)
T ss_pred             h------hhHHHHHHHhhhcccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEE
Confidence            4      33444443      5789999998743       2355566667788888888777765 356666664

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=95.32  E-value=0.077  Score=41.18  Aligned_cols=36  Identities=19%  Similarity=0.254  Sum_probs=30.6

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .++++++|+|+ |.+|..++..|.+.|   .+|++.+|+.
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g---~~v~v~~R~~  150 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKAD---CNVIIANRTV  150 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCC---CEEEEEeCCH
Confidence            35789999997 799999999999987   5888888764

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=95.30  E-value=0.25  Score=39.01  Aligned_cols=104  Identities=13%  Similarity=0.141  Sum_probs=63.6

Q ss_pred             EEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCCC
Q psy17489         39 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLG  118 (177)
Q Consensus        39 vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~  118 (177)
                      +.|.|+ |++|..++..|+..|. +..++++++++...  .....++..      .    ............   +    
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~-~~el~l~D~~~~~~--~g~~~DL~~------~----~~~~~~~~i~~~---~----   59 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGL-ASELVLVDVNEEKA--KGDALDLSH------A----SAFLATGTIVRG---G----   59 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCC-CCEEEEEeCCccHH--HHHHHhHHH------h----ccccCCCeEEEC---C----
Confidence            457885 7899999999998863 35788888865321  111111111      0    000011122211   1    


Q ss_pred             CCHHHHHHHhcCCcEEEEcCcccC-chHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        119 LSEDSEQLIKSKVNIIFHCAASLR-FDEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       119 ~~~~~~~~~~~~~d~vi~~aa~~~-~~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                          +. ..++++|++|.++|... ..++-.+.+..|+.....+.+..+++
T Consensus        60 ----~~-~~l~~aDiVIitag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~  105 (300)
T cd00300          60 ----DY-ADAADADIVVITAGAPRKPGETRLDLINRNAPILRSVITNLKKY  105 (300)
T ss_pred             ----CH-HHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence                12 25689999999999643 23345567788999999998888876

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>PRK08328 hypothetical protein; Provisional

Probab=95.28  E-value=0.13  Score=39.06  Aligned_cols=37  Identities=19%  Similarity=0.258  Sum_probs=31.1

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      .+++.+|+|.| .|++|+++++.|...|.  .+++.++.+
T Consensus        24 ~L~~~~VlIiG-~GGlGs~ia~~La~~Gv--g~i~lvD~D   60 (231)
T PRK08328         24 KLKKAKVAVVG-VGGLGSPVAYYLAAAGV--GRILLIDEQ   60 (231)
T ss_pred             HHhCCcEEEEC-CCHHHHHHHHHHHHcCC--CEEEEEcCC
Confidence            45678999999 67899999999999984  788888764

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=95.26  E-value=0.26  Score=38.95  Aligned_cols=102  Identities=11%  Similarity=0.101  Sum_probs=63.0

Q ss_pred             EecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCCCCC
Q psy17489         41 VTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLGLS  120 (177)
Q Consensus        41 VtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~  120 (177)
                      |.| .|.+|.+++..|+..+. +..+..++..++...  -...++..-         ......++.....|         
T Consensus         1 iIG-aG~VG~~~a~~l~~~~l-~~el~L~Di~~~~~~--g~a~Dl~~~---------~~~~~~~~~i~~~~---------   58 (299)
T TIGR01771         1 IIG-AGNVGSSTAFALLNQGI-ADEIVLIDINKDKAE--GEAMDLQHA---------ASFLPTPKKIRSGD---------   58 (299)
T ss_pred             CCC-cCHHHHHHHHHHHhcCC-CCEEEEEeCCCChhh--HHHHHHHHh---------hcccCCCeEEecCC---------
Confidence            345 59999999999988764 457888888653221  122221110         00001122222111         


Q ss_pred             HHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        121 EDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       121 ~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                          -..++++|+||-.||.... .++-.+.++.|+.....+.+...++
T Consensus        59 ----~~~~~daDivVitag~~rk~g~~R~dll~~N~~i~~~~~~~i~~~  103 (299)
T TIGR01771        59 ----YSDCKDADLVVITAGAPQKPGETRLELVGRNVRIMKSIVPEVVKS  103 (299)
T ss_pred             ----HHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence                1346889999999997432 2345568899999999999888876

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=95.23  E-value=0.1  Score=43.19  Aligned_cols=37  Identities=27%  Similarity=0.344  Sum_probs=31.3

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      +.+++++|.|+ |.+|..++..|...|.  ..|++.+|+.
T Consensus       180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~--~~V~v~~r~~  216 (423)
T PRK00045        180 LSGKKVLVIGA-GEMGELVAKHLAEKGV--RKITVANRTL  216 (423)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHCCC--CeEEEEeCCH
Confidence            67899999985 9999999999998873  5788888865

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=95.22  E-value=0.16  Score=40.61  Aligned_cols=36  Identities=11%  Similarity=-0.000  Sum_probs=32.2

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      .+.||++.|.| .|-||+.+++.+...|   -+|++.++.
T Consensus       139 el~gkTvGIiG-~G~IG~~va~~l~afg---m~v~~~d~~  174 (324)
T COG0111         139 ELAGKTVGIIG-LGRIGRAVAKRLKAFG---MKVIGYDPY  174 (324)
T ss_pred             cccCCEEEEEC-CCHHHHHHHHHHHhCC---CeEEEECCC
Confidence            46799999999 8999999999999998   699999883

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.16  E-value=0.088  Score=41.28  Aligned_cols=36  Identities=14%  Similarity=0.197  Sum_probs=30.8

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEe
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   71 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r   71 (177)
                      .++|++++|.|.+..+|..++..|++.|   ++|.....
T Consensus       161 ~l~Gk~vvViGrs~iVGkPla~lL~~~~---atVtv~hs  196 (287)
T PRK14176        161 DIEGKNAVIVGHSNVVGKPMAAMLLNRN---ATVSVCHV  196 (287)
T ss_pred             CCCCCEEEEECCCcccHHHHHHHHHHCC---CEEEEEec
Confidence            3689999999999999999999999987   57766543

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=95.11  E-value=0.13  Score=42.61  Aligned_cols=38  Identities=34%  Similarity=0.461  Sum_probs=32.2

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .+.+++++|.|+ |.+|..+++.|...|.  .+|++.+|+.
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~--~~V~v~~rs~  214 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGV--GKILIANRTY  214 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCC--CEEEEEeCCH
Confidence            467899999996 9999999999998773  6888888865

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=95.11  E-value=0.13  Score=40.94  Aligned_cols=79  Identities=20%  Similarity=0.167  Sum_probs=48.8

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      ++|.|.| +|.+|++|+..|.++|   +.|..-+|++      +.+.+...             ...+..+++ ++.-+.
T Consensus         2 ~kI~ViG-aGswGTALA~~la~ng---~~V~lw~r~~------~~~~~i~~-------------~~~N~~yLp-~i~lp~   57 (329)
T COG0240           2 MKIAVIG-AGSWGTALAKVLARNG---HEVRLWGRDE------EIVAEINE-------------TRENPKYLP-GILLPP   57 (329)
T ss_pred             ceEEEEc-CChHHHHHHHHHHhcC---CeeEEEecCH------HHHHHHHh-------------cCcCccccC-CccCCc
Confidence            5788998 6889999999999998   5888888875      22222221             112344444 222221


Q ss_pred             CCCCHHHHHHHhcCCcEEEEcCc
Q psy17489        117 LGLSEDSEQLIKSKVNIIFHCAA  139 (177)
Q Consensus       117 ~~~~~~~~~~~~~~~d~vi~~aa  139 (177)
                      .-....++..+++++|+|+-...
T Consensus        58 ~l~at~Dl~~a~~~ad~iv~avP   80 (329)
T COG0240          58 NLKATTDLAEALDGADIIVIAVP   80 (329)
T ss_pred             ccccccCHHHHHhcCCEEEEECC
Confidence            11112457777777887776654

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=95.10  E-value=0.04  Score=41.37  Aligned_cols=34  Identities=41%  Similarity=0.379  Sum_probs=29.7

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      |+|.|+||+|.+|..++..|.+.|   ++|++.+|++
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G---~~V~v~~r~~   34 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAG---NKIIIGSRDL   34 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCC---CEEEEEEcCH
Confidence            479999999999999999999998   5777777765

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.07  E-value=0.12  Score=40.49  Aligned_cols=34  Identities=15%  Similarity=0.301  Sum_probs=29.8

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEE
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM   69 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~   69 (177)
                      .+.|++++|.|.+..+|..++..|++.|   ++|.++
T Consensus       154 ~l~Gk~vvVvGrs~~VG~Pla~lL~~~g---AtVtv~  187 (285)
T PRK14191        154 EIKGKDVVIIGASNIVGKPLAMLMLNAG---ASVSVC  187 (285)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCC---CEEEEE
Confidence            3679999999999999999999999988   566655

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.03  E-value=0.12  Score=40.48  Aligned_cols=35  Identities=17%  Similarity=0.201  Sum_probs=30.5

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEE
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV   70 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~   70 (177)
                      .++|++++|.|.+..+|+.++..|+++|   ++|+...
T Consensus       155 ~l~Gk~vvViGrS~iVG~Pla~lL~~~~---atVt~ch  189 (284)
T PRK14190        155 DISGKHVVVVGRSNIVGKPVGQLLLNEN---ATVTYCH  189 (284)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCC---CEEEEEe
Confidence            3689999999999999999999999987   6776653

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.01  E-value=0.11  Score=40.69  Aligned_cols=36  Identities=19%  Similarity=0.234  Sum_probs=31.0

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEe
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   71 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r   71 (177)
                      .++||+++|.|.+..+|..++..|+++|   ++|..+-.
T Consensus       155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~---ATVt~chs  190 (282)
T PRK14180        155 KTEGAYAVVVGASNVVGKPVSQLLLNAK---ATVTTCHR  190 (282)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCC---CEEEEEcC
Confidence            4689999999999999999999999987   57766543

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=95.00  E-value=0.086  Score=42.53  Aligned_cols=30  Identities=27%  Similarity=0.504  Sum_probs=24.3

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEE
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYI   68 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~   68 (177)
                      ++|.|.||+|++|..+++.|.+. +. .+++.
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~h-P~-~el~~   30 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNH-PE-VEITY   30 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcC-CC-ceEEE
Confidence            47999999999999999999876 33 45553

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=94.97  E-value=0.34  Score=34.77  Aligned_cols=39  Identities=18%  Similarity=0.178  Sum_probs=29.3

Q ss_pred             cccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         31 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        31 ~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..++.||+++|.| -|.+|+.+++.|...|   .+|++...++
T Consensus        18 ~~~l~Gk~vvV~G-YG~vG~g~A~~lr~~G---a~V~V~e~DP   56 (162)
T PF00670_consen   18 NLMLAGKRVVVIG-YGKVGKGIARALRGLG---ARVTVTEIDP   56 (162)
T ss_dssp             -S--TTSEEEEE---SHHHHHHHHHHHHTT----EEEEE-SSH
T ss_pred             ceeeCCCEEEEeC-CCcccHHHHHHHhhCC---CEEEEEECCh
Confidence            4567899999999 9999999999999999   7898888765

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.94  E-value=0.11  Score=40.57  Aligned_cols=35  Identities=20%  Similarity=0.285  Sum_probs=30.3

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEE
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV   70 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~   70 (177)
                      .++||+++|.|.+..+|..++..|+++|   ++|+..-
T Consensus       155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~---AtVt~ch  189 (278)
T PRK14172        155 DIEGKEVVVIGRSNIVGKPVAQLLLNEN---ATVTICH  189 (278)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCC---CEEEEeC
Confidence            4689999999999999999999999887   5776554

>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.90  E-value=0.11  Score=40.66  Aligned_cols=35  Identities=14%  Similarity=0.124  Sum_probs=30.6

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEE
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV   70 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~   70 (177)
                      .++||+++|.|.+..+|..++..|+++|   ++|+...
T Consensus       156 ~l~Gk~vvViGrS~iVGkPla~lL~~~~---atVt~ch  190 (284)
T PRK14177        156 DVTGKNAVVVGRSPILGKPMAMLLTEMN---ATVTLCH  190 (284)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCC---CEEEEeC
Confidence            4689999999999999999999999987   5777654

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=94.88  E-value=0.33  Score=35.90  Aligned_cols=36  Identities=14%  Similarity=0.118  Sum_probs=32.3

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEe
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   71 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r   71 (177)
                      .++||+++|.|.+.-+|..++..|++.|   ++|+++..
T Consensus        59 ~l~GK~vvVIGrS~iVGkPla~lL~~~~---AtVti~~~   94 (197)
T cd01079          59 RLYGKTITIINRSEVVGRPLAALLANDG---ARVYSVDI   94 (197)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCC---CEEEEEec
Confidence            5889999999999999999999999988   78887753

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.85  E-value=0.12  Score=40.58  Aligned_cols=35  Identities=23%  Similarity=0.323  Sum_probs=30.2

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEE
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV   70 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~   70 (177)
                      .++|++++|.|.+..+|..++..|++.|   ++|++.-
T Consensus       152 ~l~Gk~vvViGrS~iVGkPla~lL~~~~---aTVtich  186 (287)
T PRK14173        152 PLAGKEVVVVGRSNIVGKPLAALLLRED---ATVTLAH  186 (287)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCC---CEEEEeC
Confidence            4689999999999999999999999887   5776543

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=94.78  E-value=0.11  Score=42.39  Aligned_cols=36  Identities=25%  Similarity=0.394  Sum_probs=31.3

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..++|.|.||.|.+|..++..|.+.|   ..|++.+|+.
T Consensus        97 ~~~~I~IiGG~GlmG~slA~~l~~~G---~~V~~~d~~~  132 (374)
T PRK11199         97 DLRPVVIVGGKGQLGRLFAKMLTLSG---YQVRILEQDD  132 (374)
T ss_pred             ccceEEEEcCCChhhHHHHHHHHHCC---CeEEEeCCCc
Confidence            45789999999999999999999998   5788888753

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=94.75  E-value=0.14  Score=43.84  Aligned_cols=71  Identities=23%  Similarity=0.302  Sum_probs=50.0

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      .+++|.| .|-+|+++++.|.++|   ..++++++++      +++++..+               .....+.+|.+++ 
T Consensus       418 ~hiiI~G-~G~~G~~la~~L~~~g---~~vvvId~d~------~~~~~~~~---------------~g~~~i~GD~~~~-  471 (558)
T PRK10669        418 NHALLVG-YGRVGSLLGEKLLAAG---IPLVVIETSR------TRVDELRE---------------RGIRAVLGNAANE-  471 (558)
T ss_pred             CCEEEEC-CChHHHHHHHHHHHCC---CCEEEEECCH------HHHHHHHH---------------CCCeEEEcCCCCH-
Confidence            4677887 7889999999999998   5788888765      33333221               3578899999997 


Q ss_pred             CCCCHHHHHHH-hcCCcEEEEcC
Q psy17489        117 LGLSEDSEQLI-KSKVNIIFHCA  138 (177)
Q Consensus       117 ~~~~~~~~~~~-~~~~d~vi~~a  138 (177)
                           +.++++ ++++|.++-+-
T Consensus       472 -----~~L~~a~i~~a~~viv~~  489 (558)
T PRK10669        472 -----EIMQLAHLDCARWLLLTI  489 (558)
T ss_pred             -----HHHHhcCccccCEEEEEc
Confidence                 555543 35777666543

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=94.74  E-value=0.54  Score=37.04  Aligned_cols=104  Identities=13%  Similarity=0.074  Sum_probs=60.3

Q ss_pred             EEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCCC
Q psy17489         39 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLG  118 (177)
Q Consensus        39 vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~  118 (177)
                      |.|+|+ |.+|..++..++..|..  .|+.+++++.....  ...+....  ..       .......+..   +     
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~--eV~L~Di~e~~~~g--~~~dl~~~--~~-------~~~~~~~I~~---t-----   58 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELG--DVVLLDIVEGLPQG--KALDISQA--AP-------ILGSDTKVTG---T-----   58 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCc--EEEEEeCCCcHHHH--HHHHHHHh--hh-------hcCCCeEEEE---c-----
Confidence            468897 99999999999887742  89999987532211  11111110  00       0001111111   0     


Q ss_pred             CCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        119 LSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       119 ~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                         .++. .++++|+||.+++.... .++..+.+..|+.....+.+...+.
T Consensus        59 ---~d~~-~l~dADiVIit~g~p~~~~~~r~e~~~~n~~i~~~i~~~i~~~  105 (300)
T cd01339          59 ---NDYE-DIAGSDVVVITAGIPRKPGMSRDDLLGTNAKIVKEVAENIKKY  105 (300)
T ss_pred             ---CCHH-HhCCCCEEEEecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence               1122 36899999999986432 2333446667888777787777665

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.74  E-value=0.12  Score=40.73  Aligned_cols=38  Identities=21%  Similarity=0.276  Sum_probs=32.5

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEE-eCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV-RDK   73 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~-r~~   73 (177)
                      .++||+++|.|.++.+|..++..|++.|   +.|++.. |+.
T Consensus       155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g---~tVtv~~~rT~  193 (296)
T PRK14188        155 DLSGLNAVVIGRSNLVGKPMAQLLLAAN---ATVTIAHSRTR  193 (296)
T ss_pred             CCCCCEEEEEcCCcchHHHHHHHHHhCC---CEEEEECCCCC
Confidence            3689999999999999999999999998   5777773 543

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=94.74  E-value=0.2  Score=39.90  Aligned_cols=92  Identities=20%  Similarity=0.221  Sum_probs=51.7

Q ss_pred             eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCC-----CC---hHHHHHHHHhhhhhhcccccCcccCCCeEEEe
Q psy17489         38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG-----SS---PEERVKNMLNSVIFDRLNKEVPDFRSKIQVIP  109 (177)
Q Consensus        38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~-----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  109 (177)
                      +|+|.| .|++|..+++.|...|.  .++..++.+.-.     ++   ..+.+-+.......+++.+. . ..-++..+.
T Consensus         1 kVlIVG-aGGlG~EiaKnLal~Gv--g~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~l-N-p~v~V~~~~   75 (312)
T cd01489           1 KVLVVG-AGGIGCELLKNLVLTGF--GEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSF-N-PNVKIVAYH   75 (312)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHhcC--CeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHH-C-CCCeEEEEe
Confidence            478898 48899999999999984  788888764211     00   01111111111111222111 1 113456666


Q ss_pred             CCCCCCCCCCCHHHHHHHhcCCcEEEEcCcc
Q psy17489        110 SNLESEHLGLSEDSEQLIKSKVNIIFHCAAS  140 (177)
Q Consensus       110 ~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~  140 (177)
                      .++.+.      ......+++.|+||.+...
T Consensus        76 ~~i~~~------~~~~~f~~~~DvVv~a~Dn  100 (312)
T cd01489          76 ANIKDP------DFNVEFFKQFDLVFNALDN  100 (312)
T ss_pred             ccCCCc------cchHHHHhcCCEEEECCCC
Confidence            676653      1234567889999988653

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=94.68  E-value=0.16  Score=39.87  Aligned_cols=37  Identities=14%  Similarity=0.133  Sum_probs=31.0

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .++++++|.|+ |+.|++++..|.+.|.  .+|++..|+.
T Consensus       125 ~~~k~vlilGa-GGaarAi~~aL~~~g~--~~i~i~nR~~  161 (283)
T PRK14027        125 AKLDSVVQVGA-GGVGNAVAYALVTHGV--QKLQVADLDT  161 (283)
T ss_pred             cCCCeEEEECC-cHHHHHHHHHHHHCCC--CEEEEEcCCH
Confidence            45789999995 8889999999999874  6888888864

>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.66  E-value=0.12  Score=40.67  Aligned_cols=34  Identities=24%  Similarity=0.214  Sum_probs=29.9

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEE
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM   69 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~   69 (177)
                      .++||+++|.|.+..+|..++..|+++|   ++|.+.
T Consensus       155 ~l~Gk~vvVIGrS~iVGkPla~lL~~~~---atVtv~  188 (297)
T PRK14186        155 DIAGKKAVVVGRSILVGKPLALMLLAAN---ATVTIA  188 (297)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCC---CEEEEe
Confidence            4689999999999999999999999987   577655

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=94.65  E-value=0.11  Score=41.87  Aligned_cols=37  Identities=22%  Similarity=0.405  Sum_probs=28.1

Q ss_pred             CCceEEEecCCcchHHHHHHHHHh-hCCCcCeEEEEEe
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLR-SFPDIGAIYIMVR   71 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~-~g~~~~~v~~~~r   71 (177)
                      ++++|.|.||+|++|..+++.|.+ ....+.++..++.
T Consensus         4 ~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS   41 (347)
T PRK06728          4 KGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSS   41 (347)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEEC
Confidence            346899999999999999999984 5444445655543

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=94.64  E-value=0.089  Score=35.91  Aligned_cols=36  Identities=22%  Similarity=0.429  Sum_probs=26.7

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ++|.|.|++|-+|+.+++.+.+. .+..-+-+++|++
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~-~~~~lv~~v~~~~   36 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILES-PGFELVGAVDRKP   36 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHS-TTEEEEEEEETTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhc-CCcEEEEEEecCC
Confidence            47999999999999999999984 2333344445554

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=94.64  E-value=0.29  Score=38.98  Aligned_cols=37  Identities=19%  Similarity=0.158  Sum_probs=31.9

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .+.++++.|.| .|.||+.+++.|...|   .+|++.++..
T Consensus       133 ~l~g~tvgIvG-~G~IG~~vA~~l~afG---~~V~~~~~~~  169 (312)
T PRK15469        133 HREDFTIGILG-AGVLGSKVAQSLQTWG---FPLRCWSRSR  169 (312)
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHCC---CEEEEEeCCC
Confidence            46789999998 8999999999999988   5888887754

>PRK07877 hypothetical protein; Provisional

Probab=94.62  E-value=0.057  Score=47.64  Aligned_cols=97  Identities=16%  Similarity=0.104  Sum_probs=56.6

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHH-------HHHHhhhhhhcccccCcccCCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERV-------KNMLNSVIFDRLNKEVPDFRSK  104 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ..++..+|+|.|+ | +|++++..|...|. +.+++.++.+.-..+-..++       -........+++.+. + ..-+
T Consensus       103 ~~L~~~~V~IvG~-G-lGs~~a~~LaraGv-vG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~i-n-p~i~  177 (722)
T PRK07877        103 ERLGRLRIGVVGL-S-VGHAIAHTLAAEGL-CGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAEL-D-PYLP  177 (722)
T ss_pred             HHHhcCCEEEEEe-c-HHHHHHHHHHHccC-CCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHH-C-CCCE
Confidence            3467789999999 7 99999999999872 25788777642111100111       000000111111111 1 1134


Q ss_pred             eEEEeCCCCCCCCCCCHHHHHHHhcCCcEEEEcCcc
Q psy17489        105 IQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAAS  140 (177)
Q Consensus       105 v~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~  140 (177)
                      +..+...++.       +.+..+++++|+|+.+.-.
T Consensus       178 v~~~~~~i~~-------~n~~~~l~~~DlVvD~~D~  206 (722)
T PRK07877        178 VEVFTDGLTE-------DNVDAFLDGLDVVVEECDS  206 (722)
T ss_pred             EEEEeccCCH-------HHHHHHhcCCCEEEECCCC
Confidence            5556666654       5788888999999999763

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=94.60  E-value=0.08  Score=39.32  Aligned_cols=39  Identities=21%  Similarity=0.247  Sum_probs=32.5

Q ss_pred             cccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         31 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        31 ~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ...++||+++|+|. |.+|+++++.|.+.|   .+|++.+++.
T Consensus        23 ~~~l~gk~v~I~G~-G~vG~~~A~~L~~~G---~~Vvv~D~~~   61 (200)
T cd01075          23 TDSLEGKTVAVQGL-GKVGYKLAEHLLEEG---AKLIVADINE   61 (200)
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHHCC---CEEEEEcCCH
Confidence            34578999999996 689999999999999   5888777653

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.58  E-value=0.12  Score=40.46  Aligned_cols=34  Identities=18%  Similarity=0.277  Sum_probs=30.2

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEE
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM   69 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~   69 (177)
                      .++||+++|.|.+|.+|..++..|++.|   ++|++.
T Consensus       155 ~l~Gk~v~vIG~S~ivG~Pla~lL~~~g---atVtv~  188 (284)
T PRK14179        155 ELEGKHAVVIGRSNIVGKPMAQLLLDKN---ATVTLT  188 (284)
T ss_pred             CCCCCEEEEECCCCcCcHHHHHHHHHCC---CEEEEE
Confidence            3689999999999999999999999998   577665

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=94.57  E-value=0.25  Score=38.72  Aligned_cols=36  Identities=22%  Similarity=0.239  Sum_probs=31.3

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .+.+++|+||+|.+|..+++.+...|   .+|+++.+++
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g---~~v~~~~~~~  197 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALG---ARVIAVTRSP  197 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcC---CeEEEEeCCH
Confidence            46799999999999999999999998   5788887654

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>KOG4022|consensus

Probab=94.57  E-value=1.2  Score=32.16  Aligned_cols=35  Identities=17%  Similarity=0.306  Sum_probs=29.0

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      -.+|+|-||-|-+|+++++.+-.++   +-|..++..+
T Consensus         3 agrVivYGGkGALGSacv~~Fkann---ywV~siDl~e   37 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANN---YWVLSIDLSE   37 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcC---eEEEEEeecc
Confidence            3589999999999999999999887   4666666654

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=94.51  E-value=0.46  Score=37.74  Aligned_cols=38  Identities=11%  Similarity=0.022  Sum_probs=32.7

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..+.||++.|.| .|.||+.+++.+...|   .+|++.+|..
T Consensus       141 ~~L~gktvGIiG-~G~IG~~vA~~~~~fg---m~V~~~d~~~  178 (311)
T PRK08410        141 GEIKGKKWGIIG-LGTIGKRVAKIAQAFG---AKVVYYSTSG  178 (311)
T ss_pred             cccCCCEEEEEC-CCHHHHHHHHHHhhcC---CEEEEECCCc
Confidence            357899999999 8999999999998887   5899888753

>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.49  E-value=0.17  Score=39.67  Aligned_cols=34  Identities=12%  Similarity=0.260  Sum_probs=29.7

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEE
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM   69 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~   69 (177)
                      .++||+++|.|.+..+|..++..|++.|   ++|+..
T Consensus       153 ~l~Gk~vvViGrS~iVGkPla~lL~~~~---atVtic  186 (282)
T PRK14169        153 DVAGKRVVIVGRSNIVGRPLAGLMVNHD---ATVTIA  186 (282)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCC---CEEEEE
Confidence            3689999999999999999999999887   576554

>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.48  E-value=0.16  Score=39.77  Aligned_cols=34  Identities=21%  Similarity=0.294  Sum_probs=29.7

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEE
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM   69 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~   69 (177)
                      .+.||+++|.|.+..+|..++..|+++|   ++|++.
T Consensus       154 ~l~Gk~vvVvGrS~iVGkPla~lL~~~~---atVtic  187 (284)
T PRK14170        154 QIEGKRAVVIGRSNIVGKPVAQLLLNEN---ATVTIA  187 (284)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCC---CEEEEe
Confidence            4689999999999999999999999887   577644

>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=94.47  E-value=0.14  Score=40.99  Aligned_cols=36  Identities=19%  Similarity=0.351  Sum_probs=28.8

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEe
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   71 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r   71 (177)
                      +++|.|.|++|-+|+.+++.|.++.+.+..+..+..
T Consensus         1 ~~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS   36 (334)
T COG0136           1 KLNVAVLGATGAVGQVLLELLEERHFPFEELVLLAS   36 (334)
T ss_pred             CcEEEEEeccchHHHHHHHHHHhcCCCcceEEEEec
Confidence            368999999999999999999996566655555544

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=94.46  E-value=0.082  Score=41.24  Aligned_cols=38  Identities=26%  Similarity=0.239  Sum_probs=32.6

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .+.+++++|+|+ |.+|++++..|...|.  .+|++.+|+.
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~--~~V~v~~R~~  157 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGV--AEITIVNRTV  157 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCC--CEEEEEeCCH
Confidence            356789999996 9999999999998873  6899999875

>PRK07411 hypothetical protein; Validated

Probab=94.44  E-value=0.17  Score=41.50  Aligned_cols=96  Identities=17%  Similarity=0.121  Sum_probs=55.2

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCC-----CC---hHHHHHHHHhhhhhhcccccCcccCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG-----SS---PEERVKNMLNSVIFDRLNKEVPDFRSK  104 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~-----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      .++..+|+|.| .|++|+++++.|...|.  .++..++.+.-.     ++   ..+.+-+.......+++.+.-  ..-+
T Consensus        35 ~L~~~~VlivG-~GGlG~~va~~La~~Gv--g~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~n--p~v~  109 (390)
T PRK07411         35 RLKAASVLCIG-TGGLGSPLLLYLAAAGI--GRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEIN--PYCQ  109 (390)
T ss_pred             HHhcCcEEEEC-CCHHHHHHHHHHHHcCC--CEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHC--CCCe
Confidence            45678999999 67799999999999984  788888764211     00   011111111111111221111  1124


Q ss_pred             eEEEeCCCCCCCCCCCHHHHHHHhcCCcEEEEcCcc
Q psy17489        105 IQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAAS  140 (177)
Q Consensus       105 v~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~  140 (177)
                      +..+...++.       +.....+.++|+||.+...
T Consensus       110 v~~~~~~~~~-------~~~~~~~~~~D~Vvd~~d~  138 (390)
T PRK07411        110 VDLYETRLSS-------ENALDILAPYDVVVDGTDN  138 (390)
T ss_pred             EEEEecccCH-------HhHHHHHhCCCEEEECCCC
Confidence            5555555554       3456677889999998663

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=94.43  E-value=0.11  Score=41.62  Aligned_cols=34  Identities=21%  Similarity=0.432  Sum_probs=27.5

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEe
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   71 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r   71 (177)
                      +++|.|.||+|+.|..|++.|... +++. ++....
T Consensus         2 ~~kV~IvGasGYtG~EL~rlL~~H-p~ve-~~~~ss   35 (349)
T COG0002           2 MIKVGIVGASGYTGLELLRLLAGH-PDVE-LILISS   35 (349)
T ss_pred             CceEEEEcCCCCcHHHHHHHHhcC-CCeE-EEEeec
Confidence            468999999999999999999988 5564 555443

>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.43  E-value=0.17  Score=39.89  Aligned_cols=36  Identities=17%  Similarity=0.177  Sum_probs=30.8

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEe
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   71 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r   71 (177)
                      .++||+++|.|.+..+|..++..|+++|   ++|+++-.
T Consensus       157 ~l~Gk~vvViGrS~iVGkPla~lL~~~~---aTVt~chs  192 (294)
T PRK14187        157 NLSGSDAVVIGRSNIVGKPMACLLLGEN---CTVTTVHS  192 (294)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHhhCC---CEEEEeCC
Confidence            4789999999999999999999999987   67765543

>PRK13243 glyoxylate reductase; Reviewed

Probab=94.36  E-value=0.33  Score=38.97  Aligned_cols=38  Identities=16%  Similarity=0.043  Sum_probs=32.8

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..+.|+++.|.| .|.||+.+++.|...|   .+|++.+|..
T Consensus       146 ~~L~gktvgIiG-~G~IG~~vA~~l~~~G---~~V~~~d~~~  183 (333)
T PRK13243        146 YDVYGKTIGIIG-FGRIGQAVARRAKGFG---MRILYYSRTR  183 (333)
T ss_pred             cCCCCCEEEEEC-cCHHHHHHHHHHHHCC---CEEEEECCCC
Confidence            357899999999 6999999999999988   5888888764

>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.36  E-value=0.16  Score=39.72  Aligned_cols=34  Identities=21%  Similarity=0.310  Sum_probs=29.5

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEE
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM   69 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~   69 (177)
                      .++||+++|.|.+..+|..++..|+++|   ++|...
T Consensus       154 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~---AtVti~  187 (281)
T PRK14183        154 DVKGKDVCVVGASNIVGKPMAALLLNAN---ATVDIC  187 (281)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCC---CEEEEe
Confidence            4689999999999999999999999887   566643

>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.35  E-value=0.18  Score=39.42  Aligned_cols=35  Identities=11%  Similarity=0.242  Sum_probs=30.0

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEE
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV   70 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~   70 (177)
                      .+.|++++|.|.+..+|..++..|++.|   ++|+..-
T Consensus       154 ~l~Gk~vvVvGrS~iVGkPla~lL~~~~---atVt~ch  188 (282)
T PRK14166        154 DLEGKDAVIIGASNIVGRPMATMLLNAG---ATVSVCH  188 (282)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCC---CEEEEeC
Confidence            3689999999999999999999999887   5776443

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=94.33  E-value=0.3  Score=37.25  Aligned_cols=32  Identities=28%  Similarity=0.363  Sum_probs=26.9

Q ss_pred             eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      +|+|.| .|++|..+++.|...|.  .++..++.+
T Consensus         1 kVlvvG-~GGlG~eilk~La~~Gv--g~i~ivD~D   32 (234)
T cd01484           1 KVLLVG-AGGIGCELLKNLALMGF--GQIHVIDMD   32 (234)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCC--CeEEEEeCC
Confidence            478888 78899999999999885  788888775

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>PRK14851 hypothetical protein; Provisional

Probab=94.28  E-value=0.21  Score=43.87  Aligned_cols=97  Identities=12%  Similarity=0.128  Sum_probs=56.8

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCC-----CC---hHHHHHHHHhhhhhhcccccCcccCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG-----SS---PEERVKNMLNSVIFDRLNKEVPDFRS  103 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~-----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      ..+++.+|+|.| .|++|+++++.|...|.  .+++.++.+.-.     .+   ....+-........+++.+. + ...
T Consensus        39 ~kL~~~~VlIvG-~GGlGs~va~~Lar~GV--G~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~i-n-P~~  113 (679)
T PRK14851         39 ERLAEAKVAIPG-MGGVGGVHLITMVRTGI--GRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSI-N-PFL  113 (679)
T ss_pred             HHHhcCeEEEEC-cCHHHHHHHHHHHHhCC--CeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHh-C-CCC
Confidence            346788999999 78899999999999985  677777653210     00   00111000011111111111 1 123


Q ss_pred             CeEEEeCCCCCCCCCCCHHHHHHHhcCCcEEEEcCcc
Q psy17489        104 KIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAAS  140 (177)
Q Consensus       104 ~v~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~  140 (177)
                      +++.+...++.       +.+..+++++|+||.+.-.
T Consensus       114 ~I~~~~~~i~~-------~n~~~~l~~~DvVid~~D~  143 (679)
T PRK14851        114 EITPFPAGINA-------DNMDAFLDGVDVVLDGLDF  143 (679)
T ss_pred             eEEEEecCCCh-------HHHHHHHhCCCEEEECCCC
Confidence            55666666654       4677788999999987653

>PLN00203 glutamyl-tRNA reductase

Probab=94.28  E-value=0.16  Score=43.18  Aligned_cols=37  Identities=30%  Similarity=0.474  Sum_probs=32.1

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      +.+++++|.|+ |.+|..+++.|...|.  .+|++..|+.
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~--~~V~V~nRs~  300 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGC--TKMVVVNRSE  300 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCC--CeEEEEeCCH
Confidence            66899999997 9999999999998873  5788888875

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=94.15  E-value=0.073  Score=35.07  Aligned_cols=36  Identities=19%  Similarity=0.292  Sum_probs=29.6

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      .+++++++|+|| |-+|..-++.|++.|   .+|++++..
T Consensus         4 ~l~~~~vlVvGg-G~va~~k~~~Ll~~g---A~v~vis~~   39 (103)
T PF13241_consen    4 DLKGKRVLVVGG-GPVAARKARLLLEAG---AKVTVISPE   39 (103)
T ss_dssp             --TT-EEEEEEE-SHHHHHHHHHHCCCT---BEEEEEESS
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHhCC---CEEEEECCc
Confidence            367899999996 889999999999998   788888875

>TIGR03693 ocin_ThiF_like putative thiazole-containing bacteriocin maturation protein

Probab=94.14  E-value=0.35  Score=41.80  Aligned_cols=88  Identities=15%  Similarity=0.207  Sum_probs=54.6

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      .+.-+|+|.| .|.+|++++..|++.|.  .++.+++-+.. .+...++.++.. . .    +.   ..+++.+-..+..
T Consensus       127 qR~akVlVlG-~Gg~~s~lv~sL~~sG~--~~I~~vd~D~v-~SNlnRIgEl~e-~-A----~~---~n~~v~v~~i~~~  193 (637)
T TIGR03693       127 SRNAKILAAG-SGDFLTKLVRSLIDSGF--PRFHAIVTDAE-EHALDRIHELAE-I-A----EE---TDDALLVQEIDFA  193 (637)
T ss_pred             hhcccEEEEe-cCchHHHHHHHHHhcCC--CcEEEEecccc-chhhhHHHHHHH-H-H----HH---hCCCCceEeccCC
Confidence            4567899999 67788999999999986  56666643322 121132222211 0 0    00   1234444444544


Q ss_pred             CCCCCCCHHHHHHHhcCCcEEEEcCcc
Q psy17489        114 SEHLGLSEDSEQLIKSKVNIIFHCAAS  140 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~d~vi~~aa~  140 (177)
                      ..      +++...+++.|+|++.+.-
T Consensus       194 ~~------~dl~ev~~~~DiVi~vsDd  214 (637)
T TIGR03693       194 ED------QHLHEAFEPADWVLYVSDN  214 (637)
T ss_pred             cc------hhHHHhhcCCcEEEEECCC
Confidence            44      6788889999999999874

Members of this protein family are found in a three-gene operon in Bacillus anthracis and related Bacillus species, where the other two genes are clearly identified with maturation of a putative thiazole-containing bacteriocin precursor. While there is no detectable pairwise sequence similarity between members of this family and the proposed cyclodehydratases such as SagC of Streptococcus pyogenes (see family TIGR03603), both families show similarity through PSI-BLAST to ThiF, a protein involved in biosynthesis of the thiazole moiety for thiamine biosynthesis. This family, therefore, may contribute to cyclodehydratase function in heterocycle-containing bacteriocin biosyntheses. In Bacillus licheniformis ATCC 14580, the bacteriocin precursor gene is adjacent to the gene for this protein.

>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.11  E-value=0.19  Score=39.41  Aligned_cols=34  Identities=21%  Similarity=0.319  Sum_probs=29.5

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEE
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM   69 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~   69 (177)
                      .+.||+++|.|.+..+|..++..|++.|   ++|...
T Consensus       156 ~l~GK~vvViGrS~iVGkPla~lL~~~~---ATVtic  189 (288)
T PRK14171        156 NLTGKNVVIIGRSNIVGKPLSALLLKEN---CSVTIC  189 (288)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCC---CEEEEe
Confidence            4689999999999999999999999887   566643

>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.07  E-value=0.21  Score=39.14  Aligned_cols=35  Identities=23%  Similarity=0.279  Sum_probs=30.1

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEE
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV   70 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~   70 (177)
                      .++||+++|.|.+..+|..++..|++.|   ++|.+.-
T Consensus       154 ~l~Gk~vvViGrS~iVGkPla~lL~~~~---AtVtich  188 (282)
T PRK14182        154 DPKGKRALVVGRSNIVGKPMAMMLLERH---ATVTIAH  188 (282)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCC---CEEEEeC
Confidence            3689999999999999999999999887   5666543

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=94.06  E-value=0.58  Score=36.90  Aligned_cols=37  Identities=8%  Similarity=0.021  Sum_probs=30.8

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..|.+++|+||+|.+|..+++.+...|   .+|++.++++
T Consensus       137 ~~g~~VLI~ga~g~vG~~aiqlAk~~G---~~Vi~~~~s~  173 (325)
T TIGR02825       137 KGGETVMVNAAAGAVGSVVGQIAKLKG---CKVVGAAGSD  173 (325)
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHcC---CEEEEEeCCH
Confidence            357899999999999999988888787   5788877654

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=94.05  E-value=0.51  Score=37.05  Aligned_cols=37  Identities=14%  Similarity=0.090  Sum_probs=31.1

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..|.+++|+||+|.+|..+++.....|   .+|++.++++
T Consensus       142 ~~g~~vlI~ga~g~vG~~aiqlA~~~G---~~vi~~~~s~  178 (329)
T cd08294         142 KAGETVVVNGAAGAVGSLVGQIAKIKG---CKVIGCAGSD  178 (329)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcC---CEEEEEeCCH
Confidence            457899999999999999988888888   5788877654

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.00  E-value=0.27  Score=38.44  Aligned_cols=37  Identities=16%  Similarity=0.143  Sum_probs=31.7

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      .++|++++|.|.+..+|+.++..|...|   ++|....++
T Consensus       149 ~l~Gk~V~ViGrs~~vGrpla~lL~~~~---atVtv~hs~  185 (279)
T PRK14178        149 SIAGKRAVVVGRSIDVGRPMAALLLNAD---ATVTICHSK  185 (279)
T ss_pred             CCCCCEEEEECCCccccHHHHHHHHhCC---CeeEEEecC
Confidence            4689999999999999999999999887   577766554

>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)

Probab=93.96  E-value=0.23  Score=39.25  Aligned_cols=35  Identities=14%  Similarity=0.208  Sum_probs=30.6

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEE
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV   70 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~   70 (177)
                      .+.|++++|.|.+..+|+.++..|+++|   ++|+.+-
T Consensus       164 ~l~Gk~vvVIGRS~iVGkPla~lL~~~~---ATVtvch  198 (299)
T PLN02516        164 PIKGKKAVVVGRSNIVGLPVSLLLLKAD---ATVTVVH  198 (299)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCC---CEEEEeC
Confidence            4689999999999999999999999987   5776653

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Probab=93.95  E-value=0.71  Score=28.55  Aligned_cols=34  Identities=24%  Similarity=0.407  Sum_probs=28.5

Q ss_pred             eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCC
Q psy17489         38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG   75 (177)
Q Consensus        38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~   75 (177)
                      +++|.| +|++|..++..|.+.|   .+|+.+.+++..
T Consensus         1 ~vvViG-gG~ig~E~A~~l~~~g---~~vtli~~~~~~   34 (80)
T PF00070_consen    1 RVVVIG-GGFIGIELAEALAELG---KEVTLIERSDRL   34 (80)
T ss_dssp             EEEEES-SSHHHHHHHHHHHHTT---SEEEEEESSSSS
T ss_pred             CEEEEC-cCHHHHHHHHHHHHhC---cEEEEEeccchh
Confidence            356776 8999999999999998   689999887644

Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=93.86  E-value=0.18  Score=39.50  Aligned_cols=36  Identities=17%  Similarity=0.232  Sum_probs=31.0

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .+++++|.| .|+.+++++..|++.|.  .+|+++.|+.
T Consensus       125 ~~~~vlilG-AGGAarAv~~aL~~~g~--~~i~V~NRt~  160 (283)
T COG0169         125 TGKRVLILG-AGGAARAVAFALAEAGA--KRITVVNRTR  160 (283)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHcCC--CEEEEEeCCH
Confidence            578999999 56688999999999984  7899999976

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=93.79  E-value=0.12  Score=41.69  Aligned_cols=35  Identities=14%  Similarity=0.185  Sum_probs=27.9

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      .++|.|+||+|++|..+++.|++.. . .++..+.++
T Consensus         3 ~~~V~I~GatG~iG~~l~~~L~~~p-~-~el~~~~~s   37 (349)
T PRK08664          3 KLKVGILGATGMVGQRFVQLLANHP-W-FEVTALAAS   37 (349)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHcCC-C-ceEEEEEcC
Confidence            4689999999999999999998763 2 477776444

>PRK06487 glycerate dehydrogenase; Provisional

Probab=93.76  E-value=0.46  Score=37.89  Aligned_cols=36  Identities=11%  Similarity=-0.075  Sum_probs=31.5

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      .+.|+++.|.| .|.||+.+++.+...|   .+|++.+|.
T Consensus       145 ~l~gktvgIiG-~G~IG~~vA~~l~~fg---m~V~~~~~~  180 (317)
T PRK06487        145 ELEGKTLGLLG-HGELGGAVARLAEAFG---MRVLIGQLP  180 (317)
T ss_pred             ccCCCEEEEEC-CCHHHHHHHHHHhhCC---CEEEEECCC
Confidence            47899999999 7999999999998887   588888775

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=93.75  E-value=0.34  Score=39.97  Aligned_cols=39  Identities=31%  Similarity=0.375  Sum_probs=33.1

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..+++++++|.| .|-+|.-++++|.+.|.  ..|++..|..
T Consensus       174 ~~L~~~~vlvIG-AGem~~lva~~L~~~g~--~~i~IaNRT~  212 (414)
T COG0373         174 GSLKDKKVLVIG-AGEMGELVAKHLAEKGV--KKITIANRTL  212 (414)
T ss_pred             cccccCeEEEEc-ccHHHHHHHHHHHhCCC--CEEEEEcCCH
Confidence            447899999999 67899999999999884  7888888865

>PRK06932 glycerate dehydrogenase; Provisional

Probab=93.73  E-value=0.64  Score=37.02  Aligned_cols=36  Identities=14%  Similarity=-0.001  Sum_probs=31.1

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      .+.|+++.|.| .|.||+.+++.+...|   .+|++.+|.
T Consensus       144 ~l~gktvgIiG-~G~IG~~va~~l~~fg---~~V~~~~~~  179 (314)
T PRK06932        144 DVRGSTLGVFG-KGCLGTEVGRLAQALG---MKVLYAEHK  179 (314)
T ss_pred             ccCCCEEEEEC-CCHHHHHHHHHHhcCC---CEEEEECCC
Confidence            47899999999 7999999999998887   588887764

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=93.72  E-value=0.14  Score=41.64  Aligned_cols=36  Identities=14%  Similarity=0.268  Sum_probs=25.9

Q ss_pred             ceEEEecCCcchHHHHHHHHHh-hCCCcCeEEEEEeC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLR-SFPDIGAIYIMVRD   72 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~-~g~~~~~v~~~~r~   72 (177)
                      ++|.|.||+|++|..+++.+++ ....+.+++.++.+
T Consensus         2 ~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~   38 (369)
T PRK06598          2 KKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTS   38 (369)
T ss_pred             eEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecch
Confidence            5799999999999999995555 43333446665543

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=93.65  E-value=0.31  Score=42.29  Aligned_cols=72  Identities=18%  Similarity=0.188  Sum_probs=50.8

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      .+++|.| .|-+|+.+++.|.+.|   ..+++++.++      ++++...+               .....+.+|.+++ 
T Consensus       401 ~~vII~G-~Gr~G~~va~~L~~~g---~~vvvID~d~------~~v~~~~~---------------~g~~v~~GDat~~-  454 (601)
T PRK03659        401 PQVIIVG-FGRFGQVIGRLLMANK---MRITVLERDI------SAVNLMRK---------------YGYKVYYGDATQL-  454 (601)
T ss_pred             CCEEEec-CchHHHHHHHHHHhCC---CCEEEEECCH------HHHHHHHh---------------CCCeEEEeeCCCH-
Confidence            5788888 7889999999999988   5788888765      33333321               3567899999987 


Q ss_pred             CCCCHHHHHHH-hcCCcEEEEcCc
Q psy17489        117 LGLSEDSEQLI-KSKVNIIFHCAA  139 (177)
Q Consensus       117 ~~~~~~~~~~~-~~~~d~vi~~aa  139 (177)
                           +.++++ +++++.++-+-.
T Consensus       455 -----~~L~~agi~~A~~vv~~~~  473 (601)
T PRK03659        455 -----ELLRAAGAEKAEAIVITCN  473 (601)
T ss_pred             -----HHHHhcCCccCCEEEEEeC
Confidence                 555544 346777666544

>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.61  E-value=0.27  Score=38.57  Aligned_cols=34  Identities=15%  Similarity=0.134  Sum_probs=28.5

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHh--hCCCcCeEEEE
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLR--SFPDIGAIYIM   69 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~--~g~~~~~v~~~   69 (177)
                      .+.||+++|.|.+..+|..++..|++  .|   ++|...
T Consensus       155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~~~---atVtvc  190 (284)
T PRK14193        155 ELAGAHVVVIGRGVTVGRPIGLLLTRRSEN---ATVTLC  190 (284)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHhhccCC---CEEEEe
Confidence            36799999999999999999999998  44   466544

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=93.58  E-value=0.65  Score=37.18  Aligned_cols=39  Identities=15%  Similarity=0.094  Sum_probs=33.2

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~   74 (177)
                      ..+.||++.|.| .|-||+.+++.+...|   .+|+..+|++.
T Consensus       142 ~~l~gktvGIiG-~GrIG~avA~r~~~Fg---m~v~y~~~~~~  180 (324)
T COG1052         142 FDLRGKTLGIIG-LGRIGQAVARRLKGFG---MKVLYYDRSPN  180 (324)
T ss_pred             cCCCCCEEEEEC-CCHHHHHHHHHHhcCC---CEEEEECCCCC
Confidence            357899999999 9999999999998666   58888888764

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=93.56  E-value=0.96  Score=28.86  Aligned_cols=35  Identities=31%  Similarity=0.342  Sum_probs=26.1

Q ss_pred             eEEEecCCcchHHHHHHHHHhhCCCcCeEEEE-EeCC
Q psy17489         38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM-VRDK   73 (177)
Q Consensus        38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~-~r~~   73 (177)
                      ++.+. |+|-+|.+|+..|++.|..-.+|+.. +|++
T Consensus         1 kI~iI-G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~   36 (96)
T PF03807_consen    1 KIGII-GAGNMGSALARGLLASGIKPHEVIIVSSRSP   36 (96)
T ss_dssp             EEEEE-STSHHHHHHHHHHHHTTS-GGEEEEEEESSH
T ss_pred             CEEEE-CCCHHHHHHHHHHHHCCCCceeEEeeccCcH
Confidence            45667 59999999999999998434577744 6665

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=93.56  E-value=0.12  Score=44.10  Aligned_cols=36  Identities=22%  Similarity=0.147  Sum_probs=31.0

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      +++++++|+|+ |++|++++..|.+.|   .+|++++|+.
T Consensus       377 ~~~k~vlIlGa-GGagrAia~~L~~~G---~~V~i~nR~~  412 (529)
T PLN02520        377 LAGKLFVVIGA-GGAGKALAYGAKEKG---ARVVIANRTY  412 (529)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCC---CEEEEEcCCH
Confidence            56789999998 799999999999998   4888888753

>PRK06849 hypothetical protein; Provisional

Probab=93.53  E-value=0.16  Score=41.51  Aligned_cols=36  Identities=14%  Similarity=0.070  Sum_probs=31.9

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      +.|+|||||++..+|..+++.|-+.|   .+|++++..+
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G---~~Vi~~d~~~   38 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAG---HTVILADSLK   38 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCc
Confidence            46899999999999999999999999   5888887764

>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial

Probab=93.53  E-value=0.12  Score=42.00  Aligned_cols=36  Identities=14%  Similarity=0.196  Sum_probs=28.5

Q ss_pred             ceEEEecCCcchHHHHHHHHH-hhCCCcCeEEEEEeC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLL-RSFPDIGAIYIMVRD   72 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~-~~g~~~~~v~~~~r~   72 (177)
                      ++|.|.||+|-+|+.+++.|. +....+.+++.++.+
T Consensus         1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~   37 (366)
T TIGR01745         1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTS   37 (366)
T ss_pred             CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEch
Confidence            478999999999999999998 655555666666543

>cd08293 PTGR2 Prostaglandin reductase

Probab=93.49  E-value=0.69  Score=36.67  Aligned_cols=35  Identities=14%  Similarity=0.038  Sum_probs=29.0

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .+++|+||+|.+|..+++.....|.  .+|+++++++
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~--~~Vi~~~~s~  190 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGC--SRVVGICGSD  190 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCC--CEEEEEcCCH
Confidence            7999999999999999888877772  2788887654

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=93.46  E-value=0.58  Score=33.34  Aligned_cols=34  Identities=21%  Similarity=0.182  Sum_probs=27.4

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      +++|.+.| .|-+|+.+++.|.+.|   ..|++.+|++
T Consensus         1 m~~Ig~IG-lG~mG~~~a~~L~~~g---~~v~~~d~~~   34 (163)
T PF03446_consen    1 MMKIGFIG-LGNMGSAMARNLAKAG---YEVTVYDRSP   34 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTT---TEEEEEESSH
T ss_pred             CCEEEEEc-hHHHHHHHHHHHHhcC---CeEEeeccch
Confidence            46889999 6999999999999999   5888888765

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK07574 formate dehydrogenase; Provisional

Probab=93.41  E-value=0.37  Score=39.50  Aligned_cols=37  Identities=14%  Similarity=0.109  Sum_probs=32.2

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .+.||++.|.| .|-||+.+++.|...|   .+|+..+|..
T Consensus       189 ~L~gktVGIvG-~G~IG~~vA~~l~~fG---~~V~~~dr~~  225 (385)
T PRK07574        189 DLEGMTVGIVG-AGRIGLAVLRRLKPFD---VKLHYTDRHR  225 (385)
T ss_pred             ecCCCEEEEEC-CCHHHHHHHHHHHhCC---CEEEEECCCC
Confidence            47899999999 6889999999999888   5888888764

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=93.40  E-value=0.16  Score=36.16  Aligned_cols=38  Identities=8%  Similarity=0.030  Sum_probs=31.0

Q ss_pred             cccccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEE
Q psy17489         29 KVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV   70 (177)
Q Consensus        29 ~~~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~   70 (177)
                      +++-.++|++++|.| +|-+|...++.|++.|   +.|.+++
T Consensus         6 P~~l~l~~~~vlVvG-GG~va~rka~~Ll~~g---a~V~VIs   43 (157)
T PRK06719          6 PLMFNLHNKVVVIIG-GGKIAYRKASGLKDTG---AFVTVVS   43 (157)
T ss_pred             ceEEEcCCCEEEEEC-CCHHHHHHHHHHHhCC---CEEEEEc
Confidence            444557899999999 6789999999999998   5776664

>PRK06436 glycerate dehydrogenase; Provisional

Probab=93.35  E-value=0.75  Score=36.48  Aligned_cols=37  Identities=16%  Similarity=0.097  Sum_probs=31.8

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .+.|+++.|.| .|.||+.+++.+...|   .+|++.+|+.
T Consensus       119 ~L~gktvgIiG-~G~IG~~vA~~l~afG---~~V~~~~r~~  155 (303)
T PRK06436        119 LLYNKSLGILG-YGGIGRRVALLAKAFG---MNIYAYTRSY  155 (303)
T ss_pred             CCCCCEEEEEC-cCHHHHHHHHHHHHCC---CEEEEECCCC
Confidence            57899999999 7999999999887777   5888888863

>PLN02928 oxidoreductase family protein

Probab=93.34  E-value=0.92  Score=36.67  Aligned_cols=37  Identities=19%  Similarity=0.169  Sum_probs=32.5

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      ..+.|+++.|.| .|-||+.+++.|...|   .+|++.+|+
T Consensus       155 ~~l~gktvGIiG-~G~IG~~vA~~l~afG---~~V~~~dr~  191 (347)
T PLN02928        155 DTLFGKTVFILG-YGAIGIELAKRLRPFG---VKLLATRRS  191 (347)
T ss_pred             cCCCCCEEEEEC-CCHHHHHHHHHHhhCC---CEEEEECCC
Confidence            357899999999 7999999999999888   588888876

>PRK13304 L-aspartate dehydrogenase; Reviewed

Probab=93.33  E-value=1.2  Score=34.48  Aligned_cols=35  Identities=17%  Similarity=0.212  Sum_probs=24.4

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      +++.|.| .|.+|..+++.|.+.+.++.-+.+.+|+
T Consensus         2 mrIgIIG-~G~iG~~ia~~l~~~~~~~elv~v~d~~   36 (265)
T PRK13304          2 LKIGIVG-CGAIASLITKAILSGRINAELYAFYDRN   36 (265)
T ss_pred             CEEEEEC-ccHHHHHHHHHHHcCCCCeEEEEEECCC
Confidence            5799999 5999999999998763223234444554

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=93.32  E-value=0.82  Score=35.35  Aligned_cols=37  Identities=16%  Similarity=0.235  Sum_probs=31.8

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..+++++|+|++|.+|..+++.+...|   .+|++.++++
T Consensus       143 ~~g~~vlI~g~~~~~g~~~~~~a~~~g---~~v~~~~~~~  179 (325)
T cd08253         143 KAGETVLVHGGSGAVGHAAVQLARWAG---ARVIATASSA  179 (325)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC---CEEEEEeCCH
Confidence            457899999999999999999998888   5788887754

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative

Probab=93.29  E-value=0.32  Score=39.31  Aligned_cols=35  Identities=17%  Similarity=0.154  Sum_probs=30.1

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEE
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV   70 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~   70 (177)
                      .++||+++|.|.+..+|..++..|++.|   ++|.+.-
T Consensus       228 ~l~GK~vvVIGRS~iVGkPLa~LL~~~~---ATVTicH  262 (364)
T PLN02616        228 EIKGKRAVVIGRSNIVGMPAALLLQRED---ATVSIVH  262 (364)
T ss_pred             CCCCCEEEEECCCccccHHHHHHHHHCC---CeEEEeC
Confidence            4689999999999999999999999987   5666543

>cd08230 glucose_DH Glucose dehydrogenase

Probab=93.29  E-value=0.75  Score=36.85  Aligned_cols=35  Identities=26%  Similarity=0.256  Sum_probs=28.7

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .+.+++|+|+ |.+|...++.+...|   .+|++++|++
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G---~~vi~~~~~~  206 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRG---FEVYVLNRRD  206 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcC---CeEEEEecCC
Confidence            5789999985 999999888777777   4788888853

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=93.25  E-value=0.22  Score=36.55  Aligned_cols=33  Identities=24%  Similarity=0.239  Sum_probs=25.7

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      |+|.|.| .|++|..++..|.+.|   .+|++++.++
T Consensus         1 M~I~ViG-lGyvGl~~A~~lA~~G---~~V~g~D~~~   33 (185)
T PF03721_consen    1 MKIAVIG-LGYVGLPLAAALAEKG---HQVIGVDIDE   33 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHHTT---SEEEEE-S-H
T ss_pred             CEEEEEC-CCcchHHHHHHHHhCC---CEEEEEeCCh
Confidence            6788886 9999999999999999   6999998754

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.21  E-value=0.34  Score=38.03  Aligned_cols=37  Identities=16%  Similarity=0.402  Sum_probs=29.7

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCC--CcCeEEEEE
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFP--DIGAIYIMV   70 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~--~~~~v~~~~   70 (177)
                      .++||+++|.|.+..+|+.++..|+++|.  + ++|.+.-
T Consensus       150 ~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~-AtVtvch  188 (287)
T PRK14181        150 PLHGRHVAIVGRSNIVGKPLAALLMQKHPDTN-ATVTLLH  188 (287)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHhCcCCCC-CEEEEeC
Confidence            46899999999999999999999998831  1 4666543

>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative

Probab=93.20  E-value=0.36  Score=38.81  Aligned_cols=35  Identities=14%  Similarity=0.090  Sum_probs=29.8

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEE
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV   70 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~   70 (177)
                      .++||+++|.|.+..+|..++..|++.|   ++|.++-
T Consensus       211 ~l~GK~vvVIGRS~iVGkPla~LL~~~~---ATVTicH  245 (345)
T PLN02897        211 EIAGKNAVVIGRSNIVGLPMSLLLQRHD---ATVSTVH  245 (345)
T ss_pred             CCCCCEEEEECCCccccHHHHHHHHHCC---CEEEEEc
Confidence            3689999999999999999999999887   5665543

>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.16  E-value=0.43  Score=37.49  Aligned_cols=36  Identities=17%  Similarity=0.123  Sum_probs=30.1

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHh----hCCCcCeEEEEEe
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLR----SFPDIGAIYIMVR   71 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~----~g~~~~~v~~~~r   71 (177)
                      .++||+++|.|.+..+|..++..|++    .|   ++|.+...
T Consensus       154 ~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~---AtVt~~hs  193 (286)
T PRK14184        154 SPAGKKAVVVGRSNIVGKPLALMLGAPGKFAN---ATVTVCHS  193 (286)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHhCCcccCC---CEEEEEeC
Confidence            36899999999999999999999998    55   56666544

>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3

Probab=93.15  E-value=0.74  Score=36.28  Aligned_cols=89  Identities=21%  Similarity=0.225  Sum_probs=50.6

Q ss_pred             eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC-----CCC---hHHHHHHHHhhhhhhcccccCcccCCCeEEEe
Q psy17489         38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK-----GSS---PEERVKNMLNSVIFDRLNKEVPDFRSKIQVIP  109 (177)
Q Consensus        38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~-----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  109 (177)
                      +|+|.| .|++|..+++.|...|.  .++.+++.+.-     .++   ..+.+-+.......+.+.+.-+  .-++..+.
T Consensus         1 kVlVVG-aGGlG~eilknLal~Gv--g~I~IvD~D~Ve~SNLnRQfLf~~~dIGk~KAevaa~~l~~~np--~v~I~~~~   75 (291)
T cd01488           1 KILVIG-AGGLGCELLKNLALSGF--RNIHVIDMDTIDVSNLNRQFLFREKDIGKPKAEVAAKFVNDRVP--GVNVTPHF   75 (291)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCC--CeEEEECCCEecccccCcCcccChHHcchHHHHHHHHHHHHHCC--CCEEEEEe
Confidence            478888 77899999999999885  78887765421     011   1122221112222222222111  13455666


Q ss_pred             CCCCCCCCCCCHHHHHHHhcCCcEEEEcCc
Q psy17489        110 SNLESEHLGLSEDSEQLIKSKVNIIFHCAA  139 (177)
Q Consensus       110 ~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa  139 (177)
                      .++.+.        -...++++|+||.+..
T Consensus        76 ~~i~~~--------~~~f~~~fdvVi~alD   97 (291)
T cd01488          76 GKIQDK--------DEEFYRQFNIIICGLD   97 (291)
T ss_pred             cccCch--------hHHHhcCCCEEEECCC
Confidence            666543        1456788999998755

UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.09  E-value=0.34  Score=38.25  Aligned_cols=27  Identities=19%  Similarity=0.391  Sum_probs=25.1

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhh
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRS   59 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~   59 (177)
                      .++||+++|.|.+..+|..++..|++.
T Consensus       154 ~l~Gk~vvViGrS~iVGkPla~lL~~~  180 (297)
T PRK14167        154 DTEGADVVVVGRSDIVGKPMANLLIQK  180 (297)
T ss_pred             CCCCCEEEEECCCcccHHHHHHHHhcC
Confidence            368999999999999999999999987

>PRK14852 hypothetical protein; Provisional

Probab=93.07  E-value=0.37  Score=43.89  Aligned_cols=96  Identities=13%  Similarity=0.110  Sum_probs=55.4

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCC--------ChHHHHHHHHhhhhhhcccccCcccCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGS--------SPEERVKNMLNSVIFDRLNKEVPDFRSK  104 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      .++..+|+|.| .|++|+.+++.|...|.  .+++.++-+.-..        .....+-+.......+++.+. + ..-+
T Consensus       329 kL~~srVlVvG-lGGlGs~ia~~LAraGV--G~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~I-N-P~v~  403 (989)
T PRK14852        329 RLLRSRVAIAG-LGGVGGIHLMTLARTGI--GNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSV-N-PFLD  403 (989)
T ss_pred             HHhcCcEEEEC-CcHHHHHHHHHHHHcCC--CeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHH-C-CCCe
Confidence            46678999999 77899999999999984  7787776542100        000111111111111111111 1 1134


Q ss_pred             eEEEeCCCCCCCCCCCHHHHHHHhcCCcEEEEcCcc
Q psy17489        105 IQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAAS  140 (177)
Q Consensus       105 v~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~  140 (177)
                      ++.+...+..       +.+..+++++|+||.+...
T Consensus       404 I~~~~~~I~~-------en~~~fl~~~DiVVDa~D~  432 (989)
T PRK14852        404 IRSFPEGVAA-------ETIDAFLKDVDLLVDGIDF  432 (989)
T ss_pred             EEEEecCCCH-------HHHHHHhhCCCEEEECCCC
Confidence            5555555544       4677788999999987654

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=93.06  E-value=0.2  Score=41.60  Aligned_cols=37  Identities=19%  Similarity=0.188  Sum_probs=32.0

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .+.|++++|+| .|.+|..+++.+...|   .+|++.++++
T Consensus       209 ~l~Gk~VlViG-~G~IG~~vA~~lr~~G---a~ViV~d~dp  245 (425)
T PRK05476        209 LIAGKVVVVAG-YGDVGKGCAQRLRGLG---ARVIVTEVDP  245 (425)
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHhCC---CEEEEEcCCc
Confidence            35899999999 5899999999999998   5888888765

>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.92  E-value=0.42  Score=37.73  Aligned_cols=37  Identities=16%  Similarity=0.323  Sum_probs=29.4

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCC-cCeEEEE
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPD-IGAIYIM   69 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~-~~~v~~~   69 (177)
                      .+.|++++|.|.+..+|..++..|++.|.+ -++|.+.
T Consensus       158 ~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~atVtv~  195 (297)
T PRK14168        158 ETSGAEVVVVGRSNIVGKPIANMMTQKGPGANATVTIV  195 (297)
T ss_pred             CCCCCEEEEECCCCcccHHHHHHHHhcccCCCCEEEEe
Confidence            468999999999999999999999987310 1566554

>PRK07634 pyrroline-5-carboxylate reductase; Reviewed

Probab=92.92  E-value=0.62  Score=35.31  Aligned_cols=38  Identities=26%  Similarity=0.410  Sum_probs=28.2

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCC-CcCeEEEEEeC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFP-DIGAIYIMVRD   72 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~-~~~~v~~~~r~   72 (177)
                      +++++|.|.| +|.+|..++..|.+.|. .+..+++.+|+
T Consensus         2 m~~~kI~iIG-~G~mg~ala~~l~~~~~~~~~~i~~~~~~   40 (245)
T PRK07634          2 LKKHRILFIG-AGRMAEAIFSGLLKTSKEYIEEIIVSNRS   40 (245)
T ss_pred             CCCCeEEEEC-cCHHHHHHHHHHHhCCCCCcCeEEEECCC
Confidence            3567899998 68999999999988763 23346666654

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=92.86  E-value=0.48  Score=41.30  Aligned_cols=72  Identities=14%  Similarity=0.257  Sum_probs=49.9

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      .+++|.| .|-+|+.+++.|.+.|   ..+++++.++      ++++...+               .....+.+|.+++ 
T Consensus       401 ~~vII~G-~Gr~G~~va~~L~~~g---~~vvvID~d~------~~v~~~~~---------------~g~~v~~GDat~~-  454 (621)
T PRK03562        401 PRVIIAG-FGRFGQIVGRLLLSSG---VKMTVLDHDP------DHIETLRK---------------FGMKVFYGDATRM-  454 (621)
T ss_pred             CcEEEEe-cChHHHHHHHHHHhCC---CCEEEEECCH------HHHHHHHh---------------cCCeEEEEeCCCH-
Confidence            5788888 7889999999999988   4778887765      33433321               3567899999987 


Q ss_pred             CCCCHHHHHHH-hcCCcEEEEcCc
Q psy17489        117 LGLSEDSEQLI-KSKVNIIFHCAA  139 (177)
Q Consensus       117 ~~~~~~~~~~~-~~~~d~vi~~aa  139 (177)
                           +-++++ +++++.+|-+-.
T Consensus       455 -----~~L~~agi~~A~~vvv~~~  473 (621)
T PRK03562        455 -----DLLESAGAAKAEVLINAID  473 (621)
T ss_pred             -----HHHHhcCCCcCCEEEEEeC
Confidence                 444443 346777766543

>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]

Probab=92.86  E-value=1.3  Score=34.25  Aligned_cols=37  Identities=27%  Similarity=0.381  Sum_probs=28.9

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      +++|.|.|++|-+|+.+++.+.+.. +..=+-+++|.+
T Consensus         2 ~iki~V~Ga~GRMG~~ii~~v~~~~-~~~L~aa~~~~~   38 (266)
T COG0289           2 MIKVAVAGASGRMGRTLIRAVLEAP-DLELVAAFDRPG   38 (266)
T ss_pred             CceEEEEcCCChHHHHHHHHHhcCC-CceEEEEEecCC
Confidence            4689999999999999999998874 444455556654

>PRK05562 precorrin-2 dehydrogenase; Provisional

Probab=92.85  E-value=1.4  Score=33.38  Aligned_cols=40  Identities=15%  Similarity=0.212  Sum_probs=30.7

Q ss_pred             cccccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         29 KVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        29 ~~~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      +++-.+++++|+|.| +|-++..=+..|++.|   ++|++++..
T Consensus        18 pi~l~~~~~~VLVVG-GG~VA~RK~~~Ll~~g---A~VtVVap~   57 (223)
T PRK05562         18 FISLLSNKIKVLIIG-GGKAAFIKGKTFLKKG---CYVYILSKK   57 (223)
T ss_pred             eeEEECCCCEEEEEC-CCHHHHHHHHHHHhCC---CEEEEEcCC
Confidence            334446789999999 5778888889999988   677777654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	177
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	4e-36
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	8e-09
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	1e-07
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	3e-07
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	4e-06
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	4e-06
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	5e-06
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	1e-05
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	3e-05
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	2e-04
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	2e-04
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	5e-04
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	5e-04
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	6e-04
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	8e-04

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478

 Score =  129 bits (326), Expect = 4e-36
 Identities = 33/162 (20%), Positives = 65/162 (40%), Gaps = 2/162 (1%)

Query: 13  LLDTALPESPIMQEEQKVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 72
            LD  +    +               +L+TG TGF+G+ L+ +LLR     G +  +VR 
Sbjct: 50  TLDRFIDADTLATAVNLPGPSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRA 109

Query: 73  KKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVN 132
           +       R++   +S   + L         +++V+  +     LGL +   + +   V+
Sbjct: 110 ESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKSEPDLGLDQPMWRRLAETVD 169

Query: 133 IIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRF 174
           +I   AA +      +     N+  T +++ +A     LK F
Sbjct: 170 LIVDSAAMVNAFPYHE-LFGPNVAGTAELIRIALTT-KLKPF 209

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score = 52.8 bits (127), Expect = 8e-09
 Identities = 26/134 (19%), Positives = 52/134 (38%), Gaps = 28/134 (20%)

Query: 39  ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEV 98
           I + G  G +G+ L  +L++                G  P E+        + D    E 
Sbjct: 17  IAIIGAAGMVGRKLTQRLVK------------DGSLGGKPVEKF------TLIDVFQPEA 58

Query: 99  PDFRSKIQVIPSNLESEHLGLS--EDSEQLIKSKVNIIFHCAASL--RFDEALQKAIRAN 154
           P            +++    LS   ++E+L++++ ++IFH AA +    +    K  R N
Sbjct: 59  PA------GFSGAVDARAADLSAPGEAEKLVEARPDVIFHLAAIVSGEAELDFDKGYRIN 112

Query: 155 LYATKQMLNLAKEC 168
           L  T+ + +  +  
Sbjct: 113 LDGTRYLFDAIRIA 126

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 49.6 bits (119), Expect = 1e-07
 Identities = 17/141 (12%), Positives = 39/141 (27%), Gaps = 38/141 (26%)

Query: 39  ILVTGGTGFMGKLLIDKLLRSFPDIG-AIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKE 97
             V G TG +G      +  +    G  + ++ R    SS  +R+  +            
Sbjct: 16  YAVLGATGLLGHHAARAIRAA----GHDLVLIHRP---SSQIQRLAYL------------ 56

Query: 98  VPDFRSKIQVIPSNLESEHLGLSEDSEQLIK--SKVNIIFHCAASLRFDEAL-QKAIRAN 154
                 + +   + +         D   L +    ++ +   A          Q+ + + 
Sbjct: 57  ------EPECRVAEML--------DHAGLERALRGLDGVIFSAGYYPSRPRRWQEEVASA 102

Query: 155 LYATKQMLNLAKECVNLKRFC 175
           L  T        +   + R  
Sbjct: 103 LGQTNPFYAACLQA-RVPRIL 122

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score = 48.1 bits (115), Expect = 3e-07
 Identities = 24/141 (17%), Positives = 52/141 (36%), Gaps = 40/141 (28%)

Query: 39  ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEV 98
           ILVTG +G +G  L+  L   +                           +VI   + +  
Sbjct: 2   ILVTGSSGQIGTELVPYLAEKYGK------------------------KNVIASDIVQRD 37

Query: 99  PDFRSKIQVIPSNLESEHLGLS--EDSEQLIKS-KVNIIFHCAA--SLRFDEALQKAIRA 153
                        ++   L +S  ++ ++ ++   ++ IFH A   S + ++    A + 
Sbjct: 38  TG----------GIKFITLDVSNRDEIDRAVEKYSIDAIFHLAGILSAKGEKDPALAYKV 87

Query: 154 NLYATKQMLNLAKECVNLKRF 174
           N+  T  +L  AK+   +++ 
Sbjct: 88  NMNGTYNILEAAKQH-RVEKV 107

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310

 Score = 44.5 bits (106), Expect = 4e-06
 Identities = 31/132 (23%), Positives = 51/132 (38%), Gaps = 30/132 (22%)

Query: 39  ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEV 98
           I+VTGG GF+G  ++  L       G   I+V D        +  N+++  I D ++KE 
Sbjct: 2   IIVTGGAGFIGSNIVKALNDK----GITDILVVDNLKDG--TKFVNLVDLNIADYMDKE- 54

Query: 99  PDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAA---SLRFDEALQKAIRANL 155
            DF  +I                         V  IFH  A   +  +D   +  +  N 
Sbjct: 55  -DFLIQIMA-----------------GEEFGDVEAIFHEGACSSTTEWDG--KYMMDNNY 94

Query: 156 YATKQMLNLAKE 167
             +K++L+   E
Sbjct: 95  QYSKELLHYCLE 106

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362

 Score = 44.6 bits (106), Expect = 4e-06
 Identities = 30/132 (22%), Positives = 50/132 (37%), Gaps = 17/132 (12%)

Query: 39  ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEV 98
           IL+TGG GF+G  L      + P      ++V DK  S+      N   S +    N   
Sbjct: 13  ILITGGAGFVGSNLAFHFQENHPK---AKVVVLDKFRSN--TLFSNNRPSSLGHFKNLIG 67

Query: 99  PDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAA--SLRFDEALQKAIRANLY 156
                   VI +++ +       D  +L K   + +FH AA          +  ++ N  
Sbjct: 68  FKGE----VIAADINNP-----LDLRRLEKLHFDYLFHQAAVSDTTMLNQ-ELVMKTNYQ 117

Query: 157 ATKQMLNLAKEC 168
           A   +L +A+  
Sbjct: 118 AFLNLLEIARSK 129

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357

 Score = 44.6 bits (106), Expect = 5e-06
 Identities = 34/151 (22%), Positives = 56/151 (37%), Gaps = 32/151 (21%)

Query: 20  ESPIMQEEQKVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPE 79
           +SP +              I+VTGG GF+G  ++  L     D G   I+V D       
Sbjct: 32  DSPDLGTGG--GSGIEGRMIIVTGGAGFIGSNIVKALN----DKGITDILVVDNLKDG-- 83

Query: 80  ERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAA 139
            +  N+++  I D ++KE  DF  +I                         V  IFH  A
Sbjct: 84  TKFVNLVDLNIADYMDKE--DFLIQIMA-----------------GEEFGDVEAIFHEGA 124

Query: 140 ---SLRFDEALQKAIRANLYATKQMLNLAKE 167
              +  +D   +  +  N   +K++L+   E
Sbjct: 125 CSSTTEWDG--KYMMDNNYQYSKELLHYCLE 153

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342

 Score = 43.4 bits (103), Expect = 1e-05
 Identities = 28/158 (17%), Positives = 55/158 (34%), Gaps = 37/158 (23%)

Query: 20  ESPIMQEEQKVDDFYRDGQILVTGGTGFMGKLLIDKLL-RSFPDIGAIYIMVRDKKGSSP 78
           ++ ++ E   V         LVTG  GF+   ++++LL   +   G      R     S 
Sbjct: 4   DNAVLPEGSLV---------LVTGANGFVASHVVEQLLEHGYKVRGT----ARSA---SK 47

Query: 79  EERVKNMLNSVIFDRLNKE-VPDFRSKIQVIPSNLESEHLGLSEDS-EQLIKSKVNIIFH 136
              ++   ++    R     V D                  L + + +++IK     + H
Sbjct: 48  LANLQKRWDAKYPGRFETAVVEDM-----------------LKQGAYDEVIK-GAAGVAH 89

Query: 137 CAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRF 174
            A+ + F     + +   +  T   L  A    ++KRF
Sbjct: 90  IASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRF 127

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312

 Score = 42.3 bits (100), Expect = 3e-05
 Identities = 31/139 (22%), Positives = 53/139 (38%), Gaps = 33/139 (23%)

Query: 39  ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEV 98
           IL+ G  G +G  L  KL +     G   ++  D +  + +      +NS  F+ +N   
Sbjct: 5   ILIIGACGQIGTELTQKLRK---LYGTENVIASDIRKLNTDV-----VNSGPFEVVN--A 54

Query: 99  PDFRSKIQVIPSNLESEHLGLSEDSEQLIKS-KVNIIFHCAA--SLRFDEALQKAIRANL 155
            DF                      E L++  K+  I+  AA  S   ++    A   N+
Sbjct: 55  LDF-------------------NQIEHLVEVHKITDIYLMAALLSATAEKNPAFAWDLNM 95

Query: 156 YATKQMLNLAKECVNLKRF 174
            +   +LNLAK    +K+ 
Sbjct: 96  NSLFHVLNLAKAK-KIKKI 113

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* Length = 344

 Score = 39.9 bits (94), Expect = 2e-04
 Identities = 27/110 (24%), Positives = 41/110 (37%), Gaps = 28/110 (25%)

Query: 32  DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIF 91
           +   +  IL+TGGTG  GK  + K+L +  +   I +  RD      E +   M      
Sbjct: 17  NMLDNQTILITGGTGSFGKCFVRKVLDTT-NAKKIIVYSRD------ELKQSEMAMEFND 69

Query: 92  DRLNKEVPDFRSKIQVIPSNLESEHLGLSEDSEQLIKS--KVNIIFHCAA 139
            R+   + D R                   D E+L  +   V+I  H AA
Sbjct: 70  PRMRFFIGDVR-------------------DLERLNYALEGVDICIHAAA 100

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 39.4 bits (92), Expect = 2e-04
 Identities = 15/65 (23%), Positives = 34/65 (52%), Gaps = 3/65 (4%)

Query: 39  ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVI-FDRLNKE 97
           + + G +G  G++L+ ++L        + ++ R +K +  EE  KN+   V+ F++L+  
Sbjct: 21  VFILGASGETGRVLLKEILEQ-GLFSKVTLIGR-RKLTFDEEAYKNVNQEVVDFEKLDDY 78

Query: 98  VPDFR 102
              F+
Sbjct: 79  ASAFQ 83

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369

 Score = 38.8 bits (90), Expect = 5e-04
 Identities = 23/129 (17%), Positives = 36/129 (27%), Gaps = 49/129 (37%)

Query: 39  ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEV 98
           I++TG  GF+GK L   L          +I                        R  KE 
Sbjct: 3   IVITGAKGFVGKNLKADLT----STTDHHI--------------------FEVHRQTKE- 37

Query: 99  PDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYAT 158
                                 E+ E  +  K + I H A   R  E  ++    N+   
Sbjct: 38  ----------------------EELESALL-KADFIVHLAGVNRP-EHDKEFSLGNVSYL 73

Query: 159 KQMLNLAKE 167
             +L++   
Sbjct: 74  DHVLDILTR 82

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score = 38.1 bits (89), Expect = 6e-04
 Identities = 15/138 (10%), Positives = 42/138 (30%), Gaps = 39/138 (28%)

Query: 39  ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEV 98
           +LVTG  G +G+++ ++L      +                          + D     +
Sbjct: 6   LLVTGAAGQLGRVMRERLAPMAEIL-------------------------RLADLSP--L 38

Query: 99  PDFRSKIQVIPSNLESEHLGLSEDSEQLIK--SKVNIIFHCAASLRFDEALQKAIRANLY 156
                  + +  +L         D+  +    +  + I H    +  ++  ++ ++ N+ 
Sbjct: 39  DPAGPNEECVQCDL--------ADANAVNAMVAGCDGIVHLGG-ISVEKPFEQILQGNII 89

Query: 157 ATKQMLNLAKECVNLKRF 174
               +   A+      R 
Sbjct: 90  GLYNLYEAARAH-GQPRI 106

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score = 37.9 bits (89), Expect = 8e-04
 Identities = 26/138 (18%), Positives = 45/138 (32%), Gaps = 40/138 (28%)

Query: 39  ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRL--NK 96
           I VTGGTGF+G+ +++ +                  G             +I  R   NK
Sbjct: 5   IAVTGGTGFLGQYVVESIK---------------NDG----NTP------IILTRSIGNK 39

Query: 97  EVPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLY 156
            + D+        S+   E L           + V+ + H AA+      +      N  
Sbjct: 40  AINDYE----YRVSDYTLEDL-------INQLNDVDAVVHLAATRGSQGKI-SEFHDNEI 87

Query: 157 ATKQMLNLAKECVNLKRF 174
            T+ + +   E  N+   
Sbjct: 88  LTQNLYDACYEN-NISNI 104

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	177
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.79
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.78
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.78
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.78
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.77
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.76
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.76
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.76
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.76
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.75
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.75
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.75
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.74
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.74
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.74
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.74
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.73
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.73
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.73
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.73
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.73
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.72
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.72
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.72
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.72
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.72
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.72
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.71
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.71
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.7
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.7
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.7
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.7
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.7
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.7
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.7
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.7
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.69
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.69
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.69
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.68
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.68
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.68
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.68
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.68
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.68
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.68
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.67
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.67
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.67
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.67
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.67
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.67
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.67
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.67
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.67
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.66
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.66
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.66
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.66
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.66
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.66
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.66
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.66
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.66
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.66
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.66
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.66
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.66
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.65
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.65
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.65
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.65
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.65
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.65
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.65
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.65
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.65
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.65
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.65
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.65
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.65
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.65
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.65
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.64
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.64
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.64
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.64
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.64
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.64
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.64
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.64
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.64
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.64
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.64
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.64
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.64
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.64
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.64
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.64
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.64
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.64
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.64
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.64
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.64
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.64
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.64
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.64
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.64
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.64
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.64
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.63
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.63
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.63
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.63
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.63
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.63
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.63
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.63
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.63
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.63
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.63
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.63
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.63
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.63
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.63
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.63
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.63
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.63
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.63
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.63
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.63
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.63
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.63
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.63
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.63
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.63
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.63
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.63
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.62
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.62
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.62
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.62
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.62
1spx_A	278	Short-chain reductase family member (5L265); paral	99.62
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.62
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.62
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.62
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.62
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.62
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.62
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.62
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.62
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.62
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.62
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.62
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.62
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.62
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.62
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.62
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.62
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.62
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.62
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.62
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.61
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.61
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.61
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.61
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.61
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.61
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.61
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.61
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.61
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.61
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.61
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.61
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.61
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.61
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.61
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.61
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.61
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.61
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.61
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.6
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.6
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.6
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.6
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.6
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.6
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.6
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.6
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.6
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.6
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.6
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.6
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.6
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.6
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.6
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.6
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.6
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.6
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.6
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.6
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.6
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.6
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.6
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.6
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.6
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.6
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.59
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.59
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.59
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.59
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.59
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.59
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.59
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.59
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.59
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.59
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.59
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.59
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.59
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.59
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.59
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.59
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.59
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.59
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.59
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.59
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.59
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.59
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.59
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.58
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.58
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.58
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.58
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.58
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.58
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.58
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.58
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.58
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.58
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.57
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.57
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.57
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.57
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.57
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.57
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.57
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.57
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.57
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.57
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.57
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.57
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.57
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.57
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.56
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.56
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.56
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.56
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.56
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.55
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.55
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.55
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.55
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.55
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.55
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.54
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.54
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.54
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.54
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.53
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.53
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.53
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.53
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.53
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.53
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.52
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.52
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.52
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.52
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.52
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.52
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.51
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.49
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.49
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.49
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.48
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.48
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.48
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.46
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.46
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.41
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.41
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.39
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.38
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.36
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.36
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.34
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.32
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.21
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.2
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.17
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.16
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.16
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.14
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.12
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.09
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.08
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.06
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.06
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.05
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.04
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.01
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.0
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	98.82
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.79
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	98.74
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.74
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.71
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	98.7
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.57
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.54
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	98.46
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.43
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.42
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.35
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.33
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.31
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.3
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.17
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.1
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.07
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.04
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.87
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.86
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	97.85
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.81
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.75
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.67
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	97.66
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	97.56
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	97.45
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	97.42
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.36
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.35
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.35
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.34
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.33
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	97.32
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.27
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	97.25
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	97.22
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.15
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.14
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.14
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.14
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.14
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.13
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	97.12
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.07
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	97.03
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	96.99
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	96.96
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	96.94
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.92
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	96.91
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	96.87
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	96.86
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	96.86
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	96.85
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	96.84
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	96.83
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	96.82
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	96.81
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.8
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.8
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	96.75
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	96.75
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	96.75
3tl2_A	315	Malate dehydrogenase; center for structural genomi	96.73
2i6t_A	303	Ubiquitin-conjugating enzyme E2-like isoform A; L-	96.69
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	96.67
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	96.66
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	96.65
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	96.63
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	96.62
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.61
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	96.53
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	96.52
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	96.5
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.49
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	96.46
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	96.42
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	96.42
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	96.39
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	96.38
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	96.37
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	96.31
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	96.3
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.29
1lnq_A	336	MTHK channels, potassium channel related protein;	96.27
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	96.27
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	96.24
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	96.22
3l07_A	285	Bifunctional protein fold; structural genomics, ID	96.22
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.21
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	96.15
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	96.14
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	96.14
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	96.14
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	96.11
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	96.08
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	96.05
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	96.03
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	95.98
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	95.97
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	95.84
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	95.76
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	95.74
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	95.73
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	95.73
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	95.71
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	95.69
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	95.65
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	95.56
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	95.55
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	95.53
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	95.51
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	95.51
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	95.5
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	95.5
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	95.5
1t4b_A	367	Aspartate-semialdehyde dehydrogenase; asadh, HOSR,	95.49
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	95.39
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	95.35
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	95.33
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	95.32
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	95.31
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	95.3
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	95.27
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	95.24
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	95.17
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	95.15
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	95.11
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	95.1
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	95.06
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	95.02
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	94.99
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	94.98
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	94.98
3tz6_A	344	Aspartate-semialdehyde dehydrogenase; asadh, ASD,	94.95
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	94.87
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	94.87
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	94.86
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	94.85
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	94.8
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	94.78
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	94.76
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	94.68
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	94.67
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	94.66
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	94.63
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	94.58
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	94.54
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	94.53
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	94.52
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	94.5
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	94.46
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	94.44
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	94.41
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	94.39
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	94.38
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	94.36
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	94.36
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	94.33
1vkn_A	351	N-acetyl-gamma-glutamyl-phosphate reductase; TM178	94.32
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	94.31
3hg7_A	324	D-isomer specific 2-hydroxyacid dehydrogenase FAM	94.21
4g65_A	461	TRK system potassium uptake protein TRKA; structur	94.17
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	94.14
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	94.13
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	94.13
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	94.09
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	94.04
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	94.02
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	93.97
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	93.95
1u8x_X	472	Maltose-6'-phosphate glucosidase; structural genom	93.94
1pjq_A	457	CYSG, siroheme synthase; rossman fold, nucleotide	93.91
3k5i_A	403	Phosphoribosyl-aminoimidazole carboxylase; purine	93.89
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	93.84
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	93.67
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	93.59
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	93.57
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	93.56
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	93.54
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	93.52

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.79  E-value=6.5e-19  Score=134.80  Aligned_cols=108  Identities=12%  Similarity=0.211  Sum_probs=94.6

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      ++|+++||||+|+||+++++.|++.|   ++|++++|++...                        ...++.++.+|+++
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G---~~V~~~~r~~~~~------------------------~~~~~~~~~~Dl~d   54 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMA---EILRLADLSPLDP------------------------AGPNEECVQCDLAD   54 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGE---EEEEEEESSCCCC------------------------CCTTEEEEECCTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcC---CEEEEEecCCccc------------------------cCCCCEEEEcCCCC
Confidence            46899999999999999999999998   6899999986432                        12578999999999


Q ss_pred             CCCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        115 EHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      .      +.+..+++++|+||||||.. ...+++.++++|+.++.++++++++. +.+||||+
T Consensus        55 ~------~~~~~~~~~~D~vi~~Ag~~-~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~iv~~  109 (267)
T 3rft_A           55 A------NAVNAMVAGCDGIVHLGGIS-VEKPFEQILQGNIIGLYNLYEAARAH-GQPRIVFA  109 (267)
T ss_dssp             H------HHHHHHHTTCSEEEECCSCC-SCCCHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEE
T ss_pred             H------HHHHHHHcCCCEEEECCCCc-CcCCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEE
Confidence            8      88999999999999999984 34567889999999999999999998 88999985

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.78  E-value=1.2e-18  Score=138.04  Aligned_cols=126  Identities=19%  Similarity=0.320  Sum_probs=97.4

Q ss_pred             ccccccccCCCceEEEecCCcchHHHHHHHHHhh-CCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCC
Q psy17489         26 EEQKVDDFYRDGQILVTGGTGFMGKLLIDKLLRS-FPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSK  104 (177)
Q Consensus        26 ~~~~~~~~~~~~~vlVtG~~G~iG~~l~~~L~~~-g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      .++.+..++++|+|+||||+|+||+++++.|++. |+  .+|++++|++..   ...+.+.+.              ..+
T Consensus        11 ~~~~~~~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~--~~V~~~~r~~~~---~~~~~~~~~--------------~~~   71 (344)
T 2gn4_A           11 SMPNHQNMLDNQTILITGGTGSFGKCFVRKVLDTTNA--KKIIVYSRDELK---QSEMAMEFN--------------DPR   71 (344)
T ss_dssp             -----CCTTTTCEEEEETTTSHHHHHHHHHHHHHCCC--SEEEEEESCHHH---HHHHHHHHC--------------CTT
T ss_pred             CCccHHHhhCCCEEEEECCCcHHHHHHHHHHHhhCCC--CEEEEEECChhh---HHHHHHHhc--------------CCC
Confidence            3445556678999999999999999999999999 83  489999986421   011111111              147


Q ss_pred             eEEEeCCCCCCCCCCCHHHHHHHhcCCcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        105 IQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       105 v~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      +.++.+|+++.      +.+..+++++|+|||+||....   ...+.+.+++|+.++.+++++|.+. ++++|||+
T Consensus        72 v~~~~~Dl~d~------~~l~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~-~v~~~V~~  140 (344)
T 2gn4_A           72 MRFFIGDVRDL------ERLNYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKN-AISQVIAL  140 (344)
T ss_dssp             EEEEECCTTCH------HHHHHHTTTCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEE
T ss_pred             EEEEECCCCCH------HHHHHHHhcCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhC-CCCEEEEe
Confidence            89999999998      7899999999999999998653   2345678999999999999999998 89999985

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.78  E-value=1.4e-18  Score=137.12  Aligned_cols=110  Identities=18%  Similarity=0.203  Sum_probs=90.8

Q ss_pred             cccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489         31 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS  110 (177)
Q Consensus        31 ~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  110 (177)
                      ....++|+|+||||+||||+++++.|++.|   ++|++++|+...                           .++.++.+
T Consensus        14 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~G---~~V~~~~r~~~~---------------------------~~~~~~~~   63 (347)
T 4id9_A           14 LVPRGSHMILVTGSAGRVGRAVVAALRTQG---RTVRGFDLRPSG---------------------------TGGEEVVG   63 (347)
T ss_dssp             -------CEEEETTTSHHHHHHHHHHHHTT---CCEEEEESSCCS---------------------------SCCSEEES
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHhCC---CEEEEEeCCCCC---------------------------CCccEEec
Confidence            344678899999999999999999999999   589999987632                           36788999


Q ss_pred             CCCCCCCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        111 NLESEHLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       111 D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      |+.+.      +.+..+++++|+|||+|+.... ...++.++++|+.++.+++++|++. ++++|||+
T Consensus        64 Dl~d~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~V~~  124 (347)
T 4id9_A           64 SLEDG------QALSDAIMGVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAA-GVRRFVFA  124 (347)
T ss_dssp             CTTCH------HHHHHHHTTCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEE
T ss_pred             CcCCH------HHHHHHHhCCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEE
Confidence            99998      7899999999999999998654 2345778999999999999999998 89999985

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.78  E-value=1.1e-19  Score=149.83  Aligned_cols=140  Identities=22%  Similarity=0.325  Sum_probs=105.1

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhh---CCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEe
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRS---FPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIP  109 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~---g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  109 (177)
                      ..++|+|+||||+||||++++++|++.   |   .+|++++|++.......++.+.+.....+.+.........++.++.
T Consensus        70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g---~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~  146 (478)
T 4dqv_A           70 SPELRTVLLTGATGFLGRYLVLELLRRLDVD---GRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVA  146 (478)
T ss_dssp             CSCCCEEEEECTTSHHHHHHHHHHHHHSCTT---CEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEE
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhcCCCC---CEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEE
Confidence            457899999999999999999999999   6   6999999987543222333222111000000000000125899999


Q ss_pred             CCCCCCCCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        110 SNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       110 ~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      +|++++.+++..+.+..+++++|+|||+||.... .++.+.+++|+.++.+++++|.+. ++++|||+
T Consensus       147 ~Dl~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~Nv~gt~~ll~aa~~~-~~~~~V~i  212 (478)
T 4dqv_A          147 GDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNA-FPYHELFGPNVAGTAELIRIALTT-KLKPFTYV  212 (478)
T ss_dssp             CCTTSGGGGCCHHHHHHHHHHCCEEEECCSSCSB-SSCCEEHHHHHHHHHHHHHHHTSS-SCCCEEEE
T ss_pred             eECCCcccCCCHHHHHHHHcCCCEEEECccccCC-cCHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEE
Confidence            9999887777778999999999999999998776 555667899999999999999998 89999985

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.77  E-value=9.1e-19  Score=138.08  Aligned_cols=125  Identities=20%  Similarity=0.245  Sum_probs=91.1

Q ss_pred             ccccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEe
Q psy17489         30 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIP  109 (177)
Q Consensus        30 ~~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  109 (177)
                      .+..+++|+|+||||+||||+++++.|++.|+. ..|++++|....... ..+.            ..  ...+++.++.
T Consensus        18 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~-~~v~~~~~~~~~~~~-~~l~------------~~--~~~~~~~~~~   81 (346)
T 4egb_A           18 LYFQSNAMNILVTGGAGFIGSNFVHYMLQSYET-YKIINFDALTYSGNL-NNVK------------SI--QDHPNYYFVK   81 (346)
T ss_dssp             ------CEEEEEETTTSHHHHHHHHHHHHHCTT-EEEEEEECCCTTCCG-GGGT------------TT--TTCTTEEEEE
T ss_pred             cccccCCCeEEEECCccHHHHHHHHHHHhhCCC-cEEEEEeccccccch-hhhh------------hh--ccCCCeEEEE
Confidence            334467899999999999999999999999854 378888876532211 1010            00  0125799999


Q ss_pred             CCCCCCCCCCCHHHHHHHhcC--CcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        110 SNLESEHLGLSEDSEQLIKSK--VNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       110 ~D~~~~~~~~~~~~~~~~~~~--~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      +|+.+.      +.+..++++  +|+|||+||.....   .++..++++|+.++.+++++|++. +++||||+
T Consensus        82 ~Dl~d~------~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~v~~  147 (346)
T 4egb_A           82 GEIQNG------ELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKY-PHIKLVQV  147 (346)
T ss_dssp             CCTTCH------HHHHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHS-TTSEEEEE
T ss_pred             cCCCCH------HHHHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEe
Confidence            999998      788888886  99999999986543   455678999999999999999998 89999985

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.76  E-value=1.7e-18  Score=129.94  Aligned_cols=114  Identities=19%  Similarity=0.296  Sum_probs=89.4

Q ss_pred             ccccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCe-EEE
Q psy17489         30 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKI-QVI  108 (177)
Q Consensus        30 ~~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~  108 (177)
                      ....+++|+|+||||+|+||+++++.|++.|   ++|++++|+...      ...+..               .++ .++
T Consensus        15 ~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G---~~V~~~~R~~~~------~~~~~~---------------~~~~~~~   70 (236)
T 3e8x_A           15 ENLYFQGMRVLVVGANGKVARYLLSELKNKG---HEPVAMVRNEEQ------GPELRE---------------RGASDIV   70 (236)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSGGG------HHHHHH---------------TTCSEEE
T ss_pred             cccCcCCCeEEEECCCChHHHHHHHHHHhCC---CeEEEEECChHH------HHHHHh---------------CCCceEE
Confidence            3445789999999999999999999999999   699999997632      111111               367 899


Q ss_pred             eCCCCCCCCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        109 PSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       109 ~~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      .+|++ .       .+.++++++|+|||+||.... .+++..+++|+.++.+++++|++. ++++|||+
T Consensus        71 ~~Dl~-~-------~~~~~~~~~D~vi~~ag~~~~-~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~  129 (236)
T 3e8x_A           71 VANLE-E-------DFSHAFASIDAVVFAAGSGPH-TGADKTILIDLWGAIKTIQEAEKR-GIKRFIMV  129 (236)
T ss_dssp             ECCTT-S-------CCGGGGTTCSEEEECCCCCTT-SCHHHHHHTTTHHHHHHHHHHHHH-TCCEEEEE
T ss_pred             EcccH-H-------HHHHHHcCCCEEEECCCCCCC-CCccccchhhHHHHHHHHHHHHHc-CCCEEEEE
Confidence            99998 3       356677899999999997643 467788999999999999999998 88999985

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.76  E-value=9.2e-18  Score=132.56  Aligned_cols=124  Identities=18%  Similarity=0.225  Sum_probs=97.0

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+|+||||+||||+++++.|++.|   ++|++++|+.....  ..+......     .   ......++.++.+|+.
T Consensus        23 ~~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~--~~~~~~~~~-----~---~~~~~~~~~~~~~Dl~   89 (351)
T 3ruf_A           23 FSPKTWLITGVAGFIGSNLLEKLLKLN---QVVIGLDNFSTGHQ--YNLDEVKTL-----V---STEQWSRFCFIEGDIR   89 (351)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCH--HHHHHHHHT-----S---CHHHHTTEEEEECCTT
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCCCCch--hhhhhhhhc-----c---ccccCCceEEEEccCC
Confidence            468999999999999999999999999   69999999764321  222221110     0   0000157899999999


Q ss_pred             CCCCCCCHHHHHHHhcCCcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        114 SEHLGLSEDSEQLIKSKVNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      +.      +.+..+++++|+|||+||.....   .++..++++|+.++.+++++|++. ++++|||+
T Consensus        90 d~------~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~v~~  149 (351)
T 3ruf_A           90 DL------TTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNA-QVQSFTYA  149 (351)
T ss_dssp             CH------HHHHHHTTTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEE
T ss_pred             CH------HHHHHHhcCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEE
Confidence            98      78999999999999999976532   345568899999999999999998 89999985

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.76  E-value=5.9e-18  Score=133.02  Aligned_cols=119  Identities=21%  Similarity=0.321  Sum_probs=88.4

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +|+|+||||+||||+++++.|++.|   ++|+++.|+.........+..+ .             ...++.++.+|+.+.
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G---~~V~~~~r~~~~~~~~~~~~~~-~-------------~~~~~~~~~~Dl~d~   71 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKG---YAVNTTVRDPDNQKKVSHLLEL-Q-------------ELGDLKIFRADLTDE   71 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTT---CEEEEEESCTTCTTTTHHHHHH-G-------------GGSCEEEEECCTTTS
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCC---CEEEEEEcCcchhhhHHHHHhc-C-------------CCCcEEEEecCCCCh
Confidence            6899999999999999999999999   5888888875432111111111 0             114688999999998


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCcccCch-HHH-HHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAASLRFD-EAL-QKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~~~-~~~-~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                            +.+..+++++|+|||+|+..... .+. .+++++|+.++.+++++|.+.++++||||+
T Consensus        72 ------~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~  129 (338)
T 2rh8_A           72 ------LSFEAPIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILT  129 (338)
T ss_dssp             ------SSSHHHHTTCSEEEEESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEE
T ss_pred             ------HHHHHHHcCCCEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEE
Confidence                  56788889999999999976432 222 347899999999999999987348999984

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.76  E-value=2.2e-18  Score=135.21  Aligned_cols=124  Identities=15%  Similarity=0.224  Sum_probs=95.6

Q ss_pred             cccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEE-e
Q psy17489         31 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVI-P  109 (177)
Q Consensus        31 ~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~  109 (177)
                      +..+++|+|+||||+||||+++++.|++.|   ++|++++|+...   .+.+.+.+..           ....++.++ .
T Consensus         6 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~---~~~~~~~~~~-----------~~~~~~~~~~~   68 (342)
T 1y1p_A            6 AVLPEGSLVLVTGANGFVASHVVEQLLEHG---YKVRGTARSASK---LANLQKRWDA-----------KYPGRFETAVV   68 (342)
T ss_dssp             CSSCTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSHHH---HHHHHHHHHH-----------HSTTTEEEEEC
T ss_pred             ccCCCCCEEEEECCccHHHHHHHHHHHHCC---CEEEEEeCCccc---HHHHHHHhhc-----------cCCCceEEEEe
Confidence            345678999999999999999999999999   589999986421   1122221110           001468888 8


Q ss_pred             CCCCCCCCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        110 SNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       110 ~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      +|+++.      +.+..+++++|+|||+||......++..++++|+.++.+++++|.+..+++||||+
T Consensus        69 ~D~~d~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~  130 (342)
T 1y1p_A           69 EDMLKQ------GAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLT  130 (342)
T ss_dssp             SCTTST------TTTTTTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEE
T ss_pred             cCCcCh------HHHHHHHcCCCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEe
Confidence            999998      56777788999999999987655567789999999999999999853378899984

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.75  E-value=2.8e-17  Score=129.24  Aligned_cols=118  Identities=21%  Similarity=0.225  Sum_probs=94.7

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCC-hHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSS-PEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      .+|+|+||||+||||+++++.|++.|   ++|++++|+..... ..+.+...               ...++.++.+|++
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~r~~~~~~~~~~~~~~~---------------~~~~~~~~~~Dl~   65 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHG---YDVVIADNLVNSKREAIARIEKI---------------TGKTPAFHETDVS   65 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTT---CEEEEECCCSSSCTHHHHHHHHH---------------HSCCCEEECCCTT
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCC---CcEEEEecCCcchHHHHHHHHhh---------------cCCCceEEEeecC
Confidence            56899999999999999999999999   68999998764432 11222211               1257889999999


Q ss_pred             CCCCCCCHHHHHHHhc--CCcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        114 SEHLGLSEDSEQLIKS--KVNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~--~~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      +.      +.+..+++  ++|+|||+||.....   ....+.+++|+.++.++++++++. ++++|||+
T Consensus        66 d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~  127 (341)
T 3enk_A           66 DE------RALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRER-AVKRIVFS  127 (341)
T ss_dssp             CH------HHHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEE
T ss_pred             CH------HHHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhC-CCCEEEEE
Confidence            98      78888887  899999999986532   334568899999999999999998 88899985

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.75  E-value=7.4e-18  Score=126.62  Aligned_cols=113  Identities=18%  Similarity=0.208  Sum_probs=94.2

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcC--eEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIG--AIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      +++|+++||||+|+||+++++.|++.|   +  +|++++|++......                     ...++.++.+|
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G---~~~~V~~~~r~~~~~~~~---------------------~~~~~~~~~~D   71 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQG---LFSKVTLIGRRKLTFDEE---------------------AYKNVNQEVVD   71 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHT---CCSEEEEEESSCCCCCSG---------------------GGGGCEEEECC
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCC---CCCEEEEEEcCCCCcccc---------------------ccCCceEEecC
Confidence            467899999999999999999999999   5  899999976432100                     01357889999


Q ss_pred             CCCCCCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        112 LESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      +++.      +.+..+++++|+|||+||.......++.++++|+.++.++++++++. ++++||++
T Consensus        72 ~~d~------~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~~~iv~~  130 (242)
T 2bka_A           72 FEKL------DDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAG-GCKHFNLL  130 (242)
T ss_dssp             GGGG------GGGGGGGSSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEE
T ss_pred             cCCH------HHHHHHhcCCCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHC-CCCEEEEE
Confidence            9998      67888889999999999986555567788999999999999999998 78899874

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.75  E-value=4.8e-18  Score=126.51  Aligned_cols=107  Identities=14%  Similarity=0.177  Sum_probs=88.2

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +|+|+||||+||||+++++.|++.|   ++|++++|++....                      ....++.++.+|+.+.
T Consensus         4 m~~ilItGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~----------------------~~~~~~~~~~~Dl~d~   58 (227)
T 3dhn_A            4 VKKIVLIGASGFVGSALLNEALNRG---FEVTAVVRHPEKIK----------------------IENEHLKVKKADVSSL   58 (227)
T ss_dssp             CCEEEEETCCHHHHHHHHHHHHTTT---CEEEEECSCGGGCC----------------------CCCTTEEEECCCTTCH
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCC---CEEEEEEcCcccch----------------------hccCceEEEEecCCCH
Confidence            5799999999999999999999998   69999999753210                      0125789999999998


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                            +.+..+++++|+|||+|+...   ....++++|+.++.++++++++. +++||||+
T Consensus        59 ------~~~~~~~~~~d~vi~~a~~~~---~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~  110 (227)
T 3dhn_A           59 ------DEVCEVCKGADAVISAFNPGW---NNPDIYDETIKVYLTIIDGVKKA-GVNRFLMV  110 (227)
T ss_dssp             ------HHHHHHHTTCSEEEECCCC---------CCSHHHHHHHHHHHHHHHT-TCSEEEEE
T ss_pred             ------HHHHHHhcCCCEEEEeCcCCC---CChhHHHHHHHHHHHHHHHHHHh-CCCEEEEe
Confidence                  889999999999999998742   22236789999999999999998 89999984

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.74  E-value=2.5e-17  Score=129.37  Aligned_cols=118  Identities=21%  Similarity=0.229  Sum_probs=94.2

Q ss_pred             cccccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEE
Q psy17489         29 KVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVI  108 (177)
Q Consensus        29 ~~~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  108 (177)
                      ..+..+++|+|+||||+||||+++++.|++.|   ++|++++|+.....  +             +    .....++.++
T Consensus        13 ~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~--~-------------~----~~~l~~v~~~   70 (330)
T 2pzm_A           13 GLVPRGSHMRILITGGAGCLGSNLIEHWLPQG---HEILVIDNFATGKR--E-------------V----LPPVAGLSVI   70 (330)
T ss_dssp             -CCSTTTCCEEEEETTTSHHHHHHHHHHGGGT---CEEEEEECCSSSCG--G-------------G----SCSCTTEEEE
T ss_pred             CCcccCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCCccch--h-------------h----hhccCCceEE
Confidence            34455778999999999999999999999999   68999999653210  0             0    0011478899


Q ss_pred             eCCCCCCCCCCCHHHHHHHhc--CCcEEEEcCcccCc--hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        109 PSNLESEHLGLSEDSEQLIKS--KVNIIFHCAASLRF--DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       109 ~~D~~~~~~~~~~~~~~~~~~--~~d~vi~~aa~~~~--~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      .+|+++.      +.+..+++  ++|+|||+||....  ..+++  +++|+.++.+++++|.+. ++++|||+
T Consensus        71 ~~Dl~d~------~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~~-~~~~iV~~  134 (330)
T 2pzm_A           71 EGSVTDA------GLLERAFDSFKPTHVVHSAAAYKDPDDWAED--AATNVQGSINVAKAASKA-GVKRLLNF  134 (330)
T ss_dssp             ECCTTCH------HHHHHHHHHHCCSEEEECCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHHH-TCSEEEEE
T ss_pred             EeeCCCH------HHHHHHHhhcCCCEEEECCccCCCccccChh--HHHHHHHHHHHHHHHHHc-CCCEEEEe
Confidence            9999998      78888888  99999999998654  23444  899999999999999988 88899985

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.74  E-value=2.3e-17  Score=131.96  Aligned_cols=112  Identities=16%  Similarity=0.132  Sum_probs=93.9

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      ++|+|+||||+||||+++++.|++.|   ++|++++|+......                     ....++.++.+|+.+
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~---------------------~~~~~v~~~~~Dl~d   83 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEG---HYVIASDWKKNEHMT---------------------EDMFCDEFHLVDLRV   83 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCCSSSC---------------------GGGTCSEEEECCTTS
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCC---CeEEEEECCCccchh---------------------hccCCceEEECCCCC
Confidence            56899999999999999999999998   589999997643210                     012468899999999


Q ss_pred             CCCCCCHHHHHHHhcCCcEEEEcCcccCc----hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        115 EHLGLSEDSEQLIKSKVNIIFHCAASLRF----DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~----~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      .      +.+..+++++|+|||+|+....    ..+++.++++|+.++.+++++|++. ++++|||+
T Consensus        84 ~------~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~~~~V~~  143 (379)
T 2c5a_A           84 M------ENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARIN-GIKRFFYA  143 (379)
T ss_dssp             H------HHHHHHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEE
T ss_pred             H------HHHHHHhCCCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEE
Confidence            8      7889999999999999997653    3456778999999999999999998 88999984

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.74  E-value=6.6e-18  Score=134.44  Aligned_cols=115  Identities=12%  Similarity=0.180  Sum_probs=92.6

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhh-CCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRS-FPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS  110 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~-g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  110 (177)
                      ..+.+|+|+||||+||||+++++.|++. |   ++|++++|+......      .              ....++.++.+
T Consensus        20 ~~m~~~~vlVtGatG~iG~~l~~~L~~~~g---~~V~~~~r~~~~~~~------~--------------~~~~~v~~~~~   76 (372)
T 3slg_A           20 GSMKAKKVLILGVNGFIGHHLSKRILETTD---WEVFGMDMQTDRLGD------L--------------VKHERMHFFEG   76 (372)
T ss_dssp             ---CCCEEEEESCSSHHHHHHHHHHHHHSS---CEEEEEESCCTTTGG------G--------------GGSTTEEEEEC
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHhCCC---CEEEEEeCChhhhhh------h--------------ccCCCeEEEeC
Confidence            3456789999999999999999999998 7   699999997643210      0              01257999999


Q ss_pred             CCC-CCCCCCCHHHHHHHhcCCcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        111 NLE-SEHLGLSEDSEQLIKSKVNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       111 D~~-~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      |++ +.      +.+..+++++|+|||+||.....   .+...++++|+.++.+++++|++. + +||||+
T Consensus        77 Dl~~d~------~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~-~~~v~~  139 (372)
T 3slg_A           77 DITINK------EWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY-G-KHLVFP  139 (372)
T ss_dssp             CTTTCH------HHHHHHHHHCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHH-T-CEEEEE
T ss_pred             ccCCCH------HHHHHHhccCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHh-C-CcEEEe
Confidence            999 76      78888899999999999986643   345678899999999999999998 6 899984

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.74  E-value=2e-17  Score=131.33  Aligned_cols=126  Identities=18%  Similarity=0.181  Sum_probs=93.9

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHh--hCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLR--SFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS  110 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~--~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  110 (177)
                      .+.+|+|+||||+||||+++++.|++  .|   ++|++++|.........+.        .+.+.........++.++.+
T Consensus         7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~g---~~V~~~~r~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~   75 (362)
T 3sxp_A            7 ELENQTILITGGAGFVGSNLAFHFQENHPK---AKVVVLDKFRSNTLFSNNR--------PSSLGHFKNLIGFKGEVIAA   75 (362)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHCTT---SEEEEEECCCCC---------------CCCCCCGGGGTTCCSEEEEC
T ss_pred             hcCCCEEEEECCCCHHHHHHHHHHHhhCCC---CeEEEEECCCccccccccc--------hhhhhhhhhccccCceEEEC
Confidence            45789999999999999999999999  78   6999999976421100000        00000001112246789999


Q ss_pred             CCCCCCCCCCHHHHHHH-hcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        111 NLESEHLGLSEDSEQLI-KSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       111 D~~~~~~~~~~~~~~~~-~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      |+++.      +.+..+ ..++|+|||+||.... ..+++.++++|+.++.+++++|++. +++ |||+
T Consensus        76 Dl~d~------~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-~~~-~V~~  136 (362)
T 3sxp_A           76 DINNP------LDLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSK-KAK-VIYA  136 (362)
T ss_dssp             CTTCH------HHHHHHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHT-TCE-EEEE
T ss_pred             CCCCH------HHHHHhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHc-CCc-EEEe
Confidence            99998      788888 7799999999997653 3567788999999999999999998 776 8874

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.73  E-value=3.3e-17  Score=129.15  Aligned_cols=120  Identities=18%  Similarity=0.202  Sum_probs=92.5

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCC----CChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG----SSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      +|+|+||||+||||+++++.|++.|   ++|++++|....    ....+.+..+...            ...++.++.+|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~r~~~~~~~~~~~l~~~------------~~~~~~~~~~D   66 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAG---YLPVVIDNFHNAFRGGGSLPESLRRVQEL------------TGRSVEFEEMD   66 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTT---CCEEEEECSSSSCBCSSSSBHHHHHHHHH------------HTCCCEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEecCCcccccccccHHHHHHHHhc------------cCCceEEEECC
Confidence            5799999999999999999999998   589999886432    0011122211100            12468899999


Q ss_pred             CCCCCCCCCHHHHHHHhc--CCcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        112 LESEHLGLSEDSEQLIKS--KVNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~--~~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      +++.      +.+..+++  ++|+|||+||....   ..+++.++++|+.++.+++++|++. ++++|||+
T Consensus        67 ~~~~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~  130 (348)
T 1ek6_A           67 ILDQ------GALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH-GVKNLVFS  130 (348)
T ss_dssp             TTCH------HHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEE
T ss_pred             CCCH------HHHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHh-CCCEEEEE
Confidence            9997      78888887  89999999997653   2456678999999999999999998 88999984

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.73  E-value=1.8e-17  Score=130.28  Aligned_cols=111  Identities=11%  Similarity=0.092  Sum_probs=85.5

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +|+|+||||+||||+++++.|++.|   ++|++++|+.....   .+                  ...++.++.+|+.+.
T Consensus        13 ~M~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~---~l------------------~~~~~~~~~~Dl~d~   68 (342)
T 2x4g_A           13 HVKYAVLGATGLLGHHAARAIRAAG---HDLVLIHRPSSQIQ---RL------------------AYLEPECRVAEMLDH   68 (342)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEECTTSCGG---GG------------------GGGCCEEEECCTTCH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEecChHhhh---hh------------------ccCCeEEEEecCCCH
Confidence            4689999999999999999999998   69999999764210   00                  013688999999998


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                            +.+..+++++|+|||+|+.... ..+++.++++|+.++.+++++|.+. +++||||+
T Consensus        69 ------~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~  124 (342)
T 2x4g_A           69 ------AGLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQA-RVPRILYV  124 (342)
T ss_dssp             ------HHHHHHTTTCSEEEEC------------CHHHHHHHHHHHHHHHHHHH-TCSCEEEE
T ss_pred             ------HHHHHHHcCCCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEE
Confidence                  7899999999999999997543 3456678999999999999999998 88999984

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.73  E-value=1.5e-17  Score=130.74  Aligned_cols=121  Identities=21%  Similarity=0.388  Sum_probs=90.1

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      ++++|+||||+||||+++++.|++.|   ++|++++|+....   .++..+..      +    .....++.++.+|+++
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G---~~V~~~~r~~~~~---~~~~~~~~------~----~~~~~~~~~~~~Dl~d   67 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERG---YTVRATVRDPTNV---KKVKHLLD------L----PKAETHLTLWKADLAD   67 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCTTCH---HHHHHHHT------S----TTHHHHEEEEECCTTS
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCC---CEEEEEECCcchh---HHHHHHHh------c----ccCCCeEEEEEcCCCC
Confidence            57899999999999999999999999   5898888875321   12221111      0    0001257889999999


Q ss_pred             CCCCCCHHHHHHHhcCCcEEEEcCcccCch--HHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        115 EHLGLSEDSEQLIKSKVNIIFHCAASLRFD--EALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~--~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      .      +.+..+++++|+|||+|+.....  .....++++|+.++.+++++|.+.++++||||+
T Consensus        68 ~------~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~  126 (337)
T 2c29_D           68 E------GSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFT  126 (337)
T ss_dssp             T------TTTHHHHTTCSEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEE
T ss_pred             H------HHHHHHHcCCCEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEe
Confidence            8      67888889999999999975432  233457899999999999999987338999984

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.73  E-value=5.8e-17  Score=128.16  Aligned_cols=124  Identities=18%  Similarity=0.200  Sum_probs=96.3

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+|+||||+||||+++++.|++.|   ++|++++|+....  .+.+......     +.   .....++.++.+|+.
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~--~~~~~~~~~~-----~~---~~~~~~~~~~~~Dl~   91 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLD---QKVVGLDNFATGH--QRNLDEVRSL-----VS---EKQWSNFKFIQGDIR   91 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCC--HHHHHHHHHH-----SC---HHHHTTEEEEECCTT
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCCccc--hhhHHHHhhh-----cc---cccCCceEEEECCCC
Confidence            467899999999999999999999998   5899999975422  1222221110     00   000157889999999


Q ss_pred             CCCCCCCHHHHHHHhcCCcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        114 SEHLGLSEDSEQLIKSKVNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      +.      +.+..+++++|+|||+||....   ..+++..+++|+.++.+++++|.+. ++++|||+
T Consensus        92 d~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~  151 (352)
T 1sb8_A           92 NL------DDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA-KVQSFTYA  151 (352)
T ss_dssp             SH------HHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEE
T ss_pred             CH------HHHHHHhcCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEe
Confidence            98      7889999999999999997653   2456678999999999999999998 88999984

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.73  E-value=5.5e-18  Score=132.15  Aligned_cols=119  Identities=24%  Similarity=0.374  Sum_probs=86.6

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEe-CCCC-CChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR-DKKG-SSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      ||+|+||||+||||+++++.|++.|   ++|++++| +... ... ..+..+             +....++.++.+|++
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~r~~~~~~~~~-~~~~~~-------------~~~~~~~~~~~~Dl~   63 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENG---YSVNTTIRADPERKRDV-SFLTNL-------------PGASEKLHFFNADLS   63 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTT---CEEEEECCCC----CCC-HHHHTS-------------TTHHHHEEECCCCTT
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCC---CEEEEEEeCCccchhHH-HHHHhh-------------hccCCceEEEecCCC
Confidence            5789999999999999999999999   58888888 4321 111 111100             000125778899999


Q ss_pred             CCCCCCCHHHHHHHhcCCcEEEEcCcccCch-HH-HHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        114 SEHLGLSEDSEQLIKSKVNIIFHCAASLRFD-EA-LQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~-~~-~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      +.      +.+..+++++|+|||+|+..... .+ ++.++++|+.++.+++++|.+.++++||||+
T Consensus        64 d~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~  123 (322)
T 2p4h_X           64 NP------DSFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYT  123 (322)
T ss_dssp             CG------GGGHHHHTTCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEE
T ss_pred             CH------HHHHHHHcCCCEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEe
Confidence            98      78888999999999999865322 12 3458899999999999999886468899984

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.72  E-value=1.9e-17  Score=130.09  Aligned_cols=118  Identities=17%  Similarity=0.141  Sum_probs=92.5

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      ++|+|+||||+||||+++++.|++.|   ++|++++|+...... ..+....              ...++.++.+|+++
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G---~~V~~~~r~~~~~~~-~~~~~~~--------------~~~~~~~~~~Dl~d   63 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKG---YEVYGADRRSGEFAS-WRLKELG--------------IENDVKIIHMDLLE   63 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEECSCCSTTTT-HHHHHTT--------------CTTTEEECCCCTTC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEECCCccccc-ccHhhcc--------------ccCceeEEECCCCC
Confidence            47899999999999999999999999   689999997643221 1222110              11468899999999


Q ss_pred             CCCCCCHHHHHHHhcC--CcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhcCCC-CCceeC
Q psy17489        115 EHLGLSEDSEQLIKSK--VNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKECVNL-KRFCEL  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~--~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~-~~~v~v  177 (177)
                      .      +.+..++++  +|+|||+||....   ..+++.++++|+.++.+++++|.+. ++ ++|||+
T Consensus        64 ~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~~~~iv~~  125 (345)
T 2z1m_A           64 F------SNIIRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTV-KPDTKFYQA  125 (345)
T ss_dssp             H------HHHHHHHHHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTCEEEEE
T ss_pred             H------HHHHHHHHhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEE
Confidence            7      778888874  6999999998653   2456778999999999999999987 76 799874

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.72  E-value=2e-17  Score=128.75  Aligned_cols=106  Identities=19%  Similarity=0.222  Sum_probs=90.0

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +|+|+||||+||||+++++.|++.|   .+|++++|++...   .                     ..++.++.+|+. .
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~---~---------------------~~~~~~~~~Dl~-~   53 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDG---NTPIILTRSIGNK---A---------------------INDYEYRVSDYT-L   53 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCCC-----------------------------CCEEEECCCC-H
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCC---CEEEEEeCCCCcc---c---------------------CCceEEEEcccc-H
Confidence            4799999999999999999999999   5999999983221   0                     136889999999 7


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                            +.+..+++++|+|||+|+..... ++...+++|+.++.+++++|++. +++||||+
T Consensus        54 ------~~~~~~~~~~d~Vih~a~~~~~~-~~~~~~~~n~~~~~~ll~a~~~~-~~~r~v~~  107 (311)
T 3m2p_A           54 ------EDLINQLNDVDAVVHLAATRGSQ-GKISEFHDNEILTQNLYDACYEN-NISNIVYA  107 (311)
T ss_dssp             ------HHHHHHTTTCSEEEECCCCCCSS-SCGGGTHHHHHHHHHHHHHHHHT-TCCEEEEE
T ss_pred             ------HHHHHhhcCCCEEEEccccCCCC-ChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEE
Confidence                  78999999999999999987654 55567899999999999999998 89999984

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.72  E-value=5.8e-17  Score=126.84  Aligned_cols=111  Identities=17%  Similarity=0.289  Sum_probs=90.9

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +|+|+||||+||||+++++.|++.|   ++|++++|......  +            .       ...++.++.+|+.+.
T Consensus         1 M~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~--~------------~-------~~~~~~~~~~D~~~~   56 (330)
T 2c20_A            1 MNSILICGGAGYIGSHAVKKLVDEG---LSVVVVDNLQTGHE--D------------A-------ITEGAKFYNGDLRDK   56 (330)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCG--G------------G-------SCTTSEEEECCTTCH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCC---CEEEEEeCCCcCch--h------------h-------cCCCcEEEECCCCCH
Confidence            3689999999999999999999998   58999988653211  0            0       113688999999997


Q ss_pred             CCCCCHHHHHHHhc--CCcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        116 HLGLSEDSEQLIKS--KVNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       116 ~~~~~~~~~~~~~~--~~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                            +.+..+++  ++|+|||+||.....   .+++.++++|+.++.+++++|++. ++++|||+
T Consensus        57 ------~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~  116 (330)
T 2c20_A           57 ------AFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEF-KVDKFIFS  116 (330)
T ss_dssp             ------HHHHHHHHHSCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEE
T ss_pred             ------HHHHHHHhhcCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHc-CCCEEEEe
Confidence                  78888888  899999999986532   456678999999999999999998 88999984

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.72  E-value=5.5e-17  Score=127.54  Aligned_cols=117  Identities=18%  Similarity=0.187  Sum_probs=90.1

Q ss_pred             ccccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEe
Q psy17489         30 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIP  109 (177)
Q Consensus        30 ~~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  109 (177)
                      ....+++|+|+||||+||||+++++.|++.|   ++|++++|+.....  +            .+    . ...++.++.
T Consensus        15 ~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~--~------------~l----~-~~~~~~~~~   72 (333)
T 2q1w_A           15 VPRGSHMKKVFITGICGQIGSHIAELLLERG---DKVVGIDNFATGRR--E------------HL----K-DHPNLTFVE   72 (333)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCG--G------------GS----C-CCTTEEEEE
T ss_pred             eeecCCCCEEEEeCCccHHHHHHHHHHHHCC---CEEEEEECCCccch--h------------hH----h-hcCCceEEE
Confidence            3445678999999999999999999999998   69999998753210  0            00    0 014788999


Q ss_pred             CCCCCCCCCCCHHHHHHHhcC--CcEEEEcCcccCc--hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        110 SNLESEHLGLSEDSEQLIKSK--VNIIFHCAASLRF--DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       110 ~D~~~~~~~~~~~~~~~~~~~--~d~vi~~aa~~~~--~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      +|+++.      +.+..++++  +|+|||+||....  ..+++  +++|+.++.+++++|.+. ++++|||+
T Consensus        73 ~Dl~d~------~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~~-~~~~iV~~  135 (333)
T 2q1w_A           73 GSIADH------ALVNQLIGDLQPDAVVHTAASYKDPDDWYND--TLTNCVGGSNVVQAAKKN-NVGRFVYF  135 (333)
T ss_dssp             CCTTCH------HHHHHHHHHHCCSEEEECCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHHT-TCSEEEEE
T ss_pred             EeCCCH------HHHHHHHhccCCcEEEECceecCCCccCChH--HHHHHHHHHHHHHHHHHh-CCCEEEEE
Confidence            999998      788888877  9999999998654  23443  899999999999999998 88999985

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.72  E-value=9.8e-17  Score=126.17  Aligned_cols=116  Identities=15%  Similarity=0.225  Sum_probs=90.9

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+|+||||+||||+++++.|++.|   ++|++++|..... ....+..+.              ...++.++.+|+++. 
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~-~~~~~~~l~--------------~~~~~~~~~~Dl~d~-   62 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQG---IDLIVFDNLSRKG-ATDNLHWLS--------------SLGNFEFVHGDIRNK-   62 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCCSTT-HHHHHHHHH--------------TTCCCEEEECCTTCH-
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCC---CEEEEEeCCCccC-chhhhhhhc--------------cCCceEEEEcCCCCH-
Confidence            689999999999999999999998   5899998853211 111122111              114688999999998 


Q ss_pred             CCCCHHHHHHHhcC--CcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhcCCCC-CceeC
Q psy17489        117 LGLSEDSEQLIKSK--VNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKECVNLK-RFCEL  177 (177)
Q Consensus       117 ~~~~~~~~~~~~~~--~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~~-~~v~v  177 (177)
                           +.+..++++  +|+|||+||....   ..+++.++++|+.++.+++++|.+. +++ +|||+
T Consensus        63 -----~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~~~~iv~~  123 (347)
T 1orr_A           63 -----NDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQY-NSNCNIIYS  123 (347)
T ss_dssp             -----HHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEE
T ss_pred             -----HHHHHHHhccCCCEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEe
Confidence                 788888887  9999999998653   2456678999999999999999998 665 89874

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.72  E-value=3.7e-17  Score=126.95  Aligned_cols=109  Identities=22%  Similarity=0.182  Sum_probs=90.5

Q ss_pred             CceEEEecCCcchHHHHHHHHHhh--CCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRS--FPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~--g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +|+++||||+||||+++++.|++.  |   ++|++++|+....   . +.                   .++.++.+|+.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g---~~V~~~~r~~~~~---~-~~-------------------~~~~~~~~D~~   55 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGT---ENVIASDIRKLNT---D-VV-------------------NSGPFEVVNAL   55 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCG---GGEEEEESCCCSC---H-HH-------------------HSSCEEECCTT
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCC---CEEEEEcCCCccc---c-cc-------------------CCCceEEecCC
Confidence            478999999999999999999998  7   5899999876432   1 11                   24678899999


Q ss_pred             CCCCCCCHHHHHHHhc--CCcEEEEcCcccCc--hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        114 SEHLGLSEDSEQLIKS--KVNIIFHCAASLRF--DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~--~~d~vi~~aa~~~~--~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      +.      +.+..+++  ++|+|||+||....  ..+++.++++|+.++.+++++|++. ++++|||+
T Consensus        56 d~------~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~  116 (312)
T 2yy7_A           56 DF------NQIEHLVEVHKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAK-KIKKIFWP  116 (312)
T ss_dssp             CH------HHHHHHHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTT-SCSEEECC
T ss_pred             CH------HHHHHHHhhcCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEe
Confidence            97      78888887  89999999997543  2456678999999999999999998 88999985

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.71  E-value=1.6e-16  Score=123.27  Aligned_cols=122  Identities=18%  Similarity=0.201  Sum_probs=90.6

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   .+|++.+|+..... .+.+.+....            ...++.++.+|+
T Consensus        46 ~l~~k~vlVTGas~GIG~aia~~la~~G---~~V~~~~~~~~~~~-~~~~~~~~~~------------~~~~~~~~~~Dv  109 (294)
T 3r3s_A           46 RLKDRKALVTGGDSGIGRAAAIAYAREG---ADVAINYLPAEEED-AQQVKALIEE------------CGRKAVLLPGDL  109 (294)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEECCGGGHHH-HHHHHHHHHH------------TTCCEEECCCCT
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCcchhH-HHHHHHHHHH------------cCCcEEEEEecC
Confidence            4688999999999999999999999999   68888887632111 1222222211            235788999999


Q ss_pred             CCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHhcCCC--CCce
Q psy17489        113 ESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKECVNL--KRFC  175 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~~~~~--~~~v  175 (177)
                      ++.      ++++.++       .++|++|||||...        ..+.|+..+++|+.++.++++++... -.  .+||
T Consensus       110 ~d~------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~-~~~~g~Iv  182 (294)
T 3r3s_A          110 SDE------SFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPL-LPKGASII  182 (294)
T ss_dssp             TSH------HHHHHHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG-CCTTCEEE
T ss_pred             CCH------HHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH-hhcCCEEE
Confidence            998      5665554       37999999999743        24678889999999999999999875 22  3677


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       183 ~i  184 (294)
T 3r3s_A          183 TT  184 (294)
T ss_dssp             EE
T ss_pred             EE
Confidence            63

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.71  E-value=7.5e-17  Score=128.84  Aligned_cols=118  Identities=15%  Similarity=0.217  Sum_probs=94.5

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+|+||||+||||+++++.|++.|.  .+|++++|+.....  +            .+    . ...++.++.+|+
T Consensus        29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~--~~V~~~~r~~~~~~--~------------~l----~-~~~~v~~~~~Dl   87 (377)
T 2q1s_A           29 KLANTNVMVVGGAGFVGSNLVKRLLELGV--NQVHVVDNLLSAEK--I------------NV----P-DHPAVRFSETSI   87 (377)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTC--SEEEEECCCTTCCG--G------------GS----C-CCTTEEEECSCT
T ss_pred             HhCCCEEEEECCccHHHHHHHHHHHHcCC--ceEEEEECCCCCch--h------------hc----c-CCCceEEEECCC
Confidence            35788999999999999999999999982  38999998753310  0            00    0 125789999999


Q ss_pred             CCCCCCCCHHHHHHHhcCCcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        113 ESEHLGLSEDSEQLIKSKVNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      .+.      +.+..+++++|+|||+|+.....   .+++.++++|+.++.+++++|++.+++++|||+
T Consensus        88 ~d~------~~l~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~  149 (377)
T 2q1s_A           88 TDD------ALLASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYS  149 (377)
T ss_dssp             TCH------HHHHHCCSCCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEE
T ss_pred             CCH------HHHHHHhhCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEe
Confidence            998      78888899999999999986542   356678999999999999999886468899984

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.70  E-value=2.3e-17  Score=125.85  Aligned_cols=107  Identities=14%  Similarity=0.177  Sum_probs=91.0

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +|+++||||+||||+++++.|++.|   ++|++++|+....                        ...++.++.+|+++.
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~------------------------~~~~~~~~~~Dl~d~   54 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLA---HEVRLSDIVDLGA------------------------AEAHEEIVACDLADA   54 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTE---EEEEECCSSCCCC------------------------CCTTEEECCCCTTCH
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCC---CEEEEEeCCCccc------------------------cCCCccEEEccCCCH
Confidence            3689999999999999999999998   6899999976421                        013578899999997


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                            +.+..+++++|+|||+|+... ..++...+++|+.++.++++++.+. ++++|||+
T Consensus        55 ------~~~~~~~~~~d~vi~~a~~~~-~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~  108 (267)
T 3ay3_A           55 ------QAVHDLVKDCDGIIHLGGVSV-ERPWNDILQANIIGAYNLYEAARNL-GKPRIVFA  108 (267)
T ss_dssp             ------HHHHHHHTTCSEEEECCSCCS-CCCHHHHHHHTHHHHHHHHHHHHHT-TCCEEEEE
T ss_pred             ------HHHHHHHcCCCEEEECCcCCC-CCCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEe
Confidence                  788999999999999999763 3456778999999999999999998 88999985

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.70  E-value=8.1e-17  Score=127.48  Aligned_cols=119  Identities=16%  Similarity=0.151  Sum_probs=93.3

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+|+||||+||||+++++.|++.|   ++|++++|+......   +.....             ...++.++.+|+.
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~---~~~~~~-------------~~~~~~~~~~Dl~   67 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMG---ATVKGYSLTAPTVPS---LFETAR-------------VADGMQSEIGDIR   67 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCSSSSC---HHHHTT-------------TTTTSEEEECCTT
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCC---CeEEEEeCCCcccch---hhHhhc-------------cCCceEEEEcccc
Confidence            567899999999999999999999998   589999997643211   111000             1247889999999


Q ss_pred             CCCCCCCHHHHHHHhcC--CcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        114 SEHLGLSEDSEQLIKSK--VNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~~--~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      +.      +.+..++++  +|+|||+||....   ..++..++++|+.++.+++++|.+.+++++|||+
T Consensus        68 d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~  130 (357)
T 1rkx_A           68 DQ------NKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNI  130 (357)
T ss_dssp             CH------HHHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEE
T ss_pred             CH------HHHHHHHHhcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEe
Confidence            98      788888875  8999999996432   2446678999999999999999987348899984

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.70  E-value=1e-16  Score=126.15  Aligned_cols=117  Identities=16%  Similarity=0.278  Sum_probs=92.1

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCC----cCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEe
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPD----IGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIP  109 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~----~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  109 (177)
                      +++|+|+||||+||||+++++.|++.|+.    +++|++++|+......                     ....++.++.
T Consensus        12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~---------------------~~~~~~~~~~   70 (342)
T 2hrz_A           12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA---------------------GFSGAVDARA   70 (342)
T ss_dssp             CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT---------------------TCCSEEEEEE
T ss_pred             ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc---------------------ccCCceeEEE
Confidence            57889999999999999999999999820    0378999987532110                     0124688899


Q ss_pred             CCCCCCCCCCCHHHHHHHhc-CCcEEEEcCcccCc--hHHHHHHHHHhHHHHHHHHHHHHhcC----CCCCceeC
Q psy17489        110 SNLESEHLGLSEDSEQLIKS-KVNIIFHCAASLRF--DEALQKAIRANLYATKQMLNLAKECV----NLKRFCEL  177 (177)
Q Consensus       110 ~D~~~~~~~~~~~~~~~~~~-~~d~vi~~aa~~~~--~~~~~~~~~~nv~~~~~ll~~~~~~~----~~~~~v~v  177 (177)
                      +|+.+.      +.+..+++ ++|+|||+||....  ..+++..+++|+.++.+++++|.+.+    ++++|||+
T Consensus        71 ~Dl~d~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~  139 (342)
T 2hrz_A           71 ADLSAP------GEAEKLVEARPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFT  139 (342)
T ss_dssp             CCTTST------THHHHHHHTCCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEE
T ss_pred             cCCCCH------HHHHHHHhcCCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEe
Confidence            999998      67888884 89999999997542  24567789999999999999998872    27899874

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.70  E-value=2.3e-17  Score=122.42  Aligned_cols=103  Identities=19%  Similarity=0.296  Sum_probs=88.2

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC-C
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES-E  115 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~  115 (177)
                      |+|+||||+|+||+++++.|++.|   ++|++++|++....                       ...++.++.+|+.+ .
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~-----------------------~~~~~~~~~~D~~d~~   54 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTD---YQIYAGARKVEQVP-----------------------QYNNVKAVHFDVDWTP   54 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSS---CEEEEEESSGGGSC-----------------------CCTTEEEEECCTTSCH
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCccchh-----------------------hcCCceEEEecccCCH
Confidence            579999999999999999999998   69999999763210                       11578999999999 6


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                            +.+..+++++|+|||+||....     ..+++|+.++.+++++|++. ++++|||+
T Consensus        55 ------~~~~~~~~~~d~vi~~ag~~~~-----~~~~~n~~~~~~l~~a~~~~-~~~~iv~~  104 (219)
T 3dqp_A           55 ------EEMAKQLHGMDAIINVSGSGGK-----SLLKVDLYGAVKLMQAAEKA-EVKRFILL  104 (219)
T ss_dssp             ------HHHHTTTTTCSEEEECCCCTTS-----SCCCCCCHHHHHHHHHHHHT-TCCEEEEE
T ss_pred             ------HHHHHHHcCCCEEEECCcCCCC-----CcEeEeHHHHHHHHHHHHHh-CCCEEEEE
Confidence                  7899999999999999997642     26788999999999999998 88999984

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.70  E-value=1e-16  Score=125.77  Aligned_cols=121  Identities=23%  Similarity=0.339  Sum_probs=91.6

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      .+|+|+||||+||||+++++.|++.|.+ .+|++++|....... +.+.         .+    . ...++.++.+|+++
T Consensus         2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~-~~V~~~~r~~~~~~~-~~~~---------~~----~-~~~~~~~~~~Dl~d   65 (336)
T 2hun_A            2 HSMKLLVTGGMGFIGSNFIRYILEKHPD-WEVINIDKLGYGSNP-ANLK---------DL----E-DDPRYTFVKGDVAD   65 (336)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHCTT-CEEEEEECCCTTCCG-GGGT---------TT----T-TCTTEEEEECCTTC
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHhCCC-CEEEEEecCcccCch-hHHh---------hh----c-cCCceEEEEcCCCC
Confidence            3578999999999999999999998632 489999986422111 0000         00    0 12578999999999


Q ss_pred             CCCCCCHHHHHHHhcCCcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        115 EHLGLSEDSEQLIKSKVNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      .      +.+..++.++|+|||+||.....   .+++.++++|+.++.+++++|.+.+..+||||+
T Consensus        66 ~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~  125 (336)
T 2hun_A           66 Y------ELVKELVRKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHV  125 (336)
T ss_dssp             H------HHHHHHHHTCSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred             H------HHHHHHhhCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEe
Confidence            8      78888889999999999986532   345678999999999999999987224799874

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.70  E-value=1.8e-16  Score=123.57  Aligned_cols=110  Identities=19%  Similarity=0.306  Sum_probs=89.1

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      ...++++||||+||||+++++.|++.|   ++|++++|+....                        . .++.++.+|++
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~r~~~~~------------------------~-l~~~~~~~Dl~   61 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQN---VEVFGTSRNNEAK------------------------L-PNVEMISLDIM   61 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCTTCC------------------------C-TTEEEEECCTT
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCC---CEEEEEecCCccc------------------------c-ceeeEEECCCC
Confidence            356799999999999999999999999   5899999875321                        0 15788999999


Q ss_pred             CCCCCCCHHHHHHHhcC--CcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        114 SEHLGLSEDSEQLIKSK--VNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~~--~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      +.      +.+..++++  +|+|||+||.....   ++++.++++|+.++.+++++|.+.+++++|||+
T Consensus        62 d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~  124 (321)
T 2pk3_A           62 DS------QRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTI  124 (321)
T ss_dssp             CH------HHHHHHHHHHCCSEEEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEE
T ss_pred             CH------HHHHHHHHhcCCCEEEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEE
Confidence            97      788888875  99999999986532   356778999999999999999775358899985

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.70  E-value=7.2e-17  Score=127.18  Aligned_cols=115  Identities=18%  Similarity=0.359  Sum_probs=90.9

Q ss_pred             CceEEEecCCcchHHHHHHHHHhh--CCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRS--FPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~--g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +|+|+||||+||||+++++.|++.  |   ++|++++|+...... +.+         +.+      ...++.++.+|++
T Consensus         4 m~~vlVTGatG~iG~~l~~~L~~~~~g---~~V~~~~r~~~~~~~-~~~---------~~~------~~~~~~~~~~Dl~   64 (348)
T 1oc2_A            4 FKNIIVTGGAGFIGSNFVHYVYNNHPD---VHVTVLDKLTYAGNK-ANL---------EAI------LGDRVELVVGDIA   64 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTT---CEEEEEECCCTTCCG-GGT---------GGG------CSSSEEEEECCTT
T ss_pred             CcEEEEeCCccHHHHHHHHHHHHhCCC---CEEEEEeCCCCCCCh-hHH---------hhh------ccCCeEEEECCCC
Confidence            479999999999999999999998  6   589999986532111 000         000      1257899999999


Q ss_pred             CCCCCCCHHHHHHHhcCCcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        114 SEHLGLSEDSEQLIKSKVNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      +.      +.+..+++++|+|||+||.....   .+++.++++|+.++.+++++|.+. ++ +|||+
T Consensus        65 d~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~-~~v~~  123 (348)
T 1oc2_A           65 DA------ELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY-DI-RFHHV  123 (348)
T ss_dssp             CH------HHHHHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHH-TC-EEEEE
T ss_pred             CH------HHHHHHhhcCCEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHh-CC-eEEEe
Confidence            98      78999999999999999986532   345678999999999999999998 66 88874

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.69  E-value=2.6e-16  Score=126.10  Aligned_cols=125  Identities=16%  Similarity=0.156  Sum_probs=92.9

Q ss_pred             CceEEEecCCcchHHHHHHHHH-hhCCCcCeEEEEEeCCCCC------ChHHHHHHHHhhhhhhcccccCcccCCC---e
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLL-RSFPDIGAIYIMVRDKKGS------SPEERVKNMLNSVIFDRLNKEVPDFRSK---I  105 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~-~~g~~~~~v~~~~r~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~---v  105 (177)
                      +|+|+||||+||||+++++.|+ +.|   ++|++++|.....      ...+.+...+..     +....  ...+   +
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~--~~~~~~~~   71 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTN---HSVVIVDSLVGTHGKSDHVETRENVARKLQQ-----SDGPK--PPWADRYA   71 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCC---CEEEEEECCTTTTTCCTTSCCHHHHHHHHHH-----SCSSC--CTTTTCCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCC---CEEEEEecCCcccccccccchHHHHHHHHHH-----hhccc--cccCCceE
Confidence            4689999999999999999999 998   5899999875321      001223221111     00000  0123   8


Q ss_pred             EEEeCCCCCCCCCCCHHHHHHHhc--C-CcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        106 QVIPSNLESEHLGLSEDSEQLIKS--K-VNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       106 ~~~~~D~~~~~~~~~~~~~~~~~~--~-~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      .++.+|+++.      +.+..+++  + +|+|||+||....   ..+++.++++|+.++.+++++|++. ++++|||+
T Consensus        72 ~~~~~Dl~d~------~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~~~iv~~  142 (397)
T 1gy8_A           72 ALEVGDVRNE------DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH-KCDKIIFS  142 (397)
T ss_dssp             EEEESCTTCH------HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEE
T ss_pred             EEEECCCCCH------HHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHh-CCCEEEEE
Confidence            8999999998      77888876  5 9999999998654   2456678999999999999999998 88999985

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.69  E-value=1e-16  Score=125.63  Aligned_cols=118  Identities=19%  Similarity=0.129  Sum_probs=91.7

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      .+++|+||||+||||+++++.|++.|   ++|++++|+...... ..+....              ...++.++.+|+.+
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~-~~~~~~~--------------~~~~~~~~~~Dl~d   74 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKG---YRVHGLVARRSSDTR-WRLRELG--------------IEGDIQYEDGDMAD   74 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCCSSCCC-HHHHHTT--------------CGGGEEEEECCTTC
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCC---CeEEEEeCCCccccc-cchhhcc--------------ccCceEEEECCCCC
Confidence            46899999999999999999999998   689999997643211 1121110              11468899999999


Q ss_pred             CCCCCCHHHHHHHhcC--CcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhcCCC-CCceeC
Q psy17489        115 EHLGLSEDSEQLIKSK--VNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKECVNL-KRFCEL  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~--~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~-~~~v~v  177 (177)
                      .      +.+..++++  +|+|||+||....   ..++..++++|+.++.+++++|.+. ++ ++|||+
T Consensus        75 ~------~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~~  136 (335)
T 1rpn_A           75 A------CSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQF-SPETRFYQA  136 (335)
T ss_dssp             H------HHHHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTSEEEEE
T ss_pred             H------HHHHHHHHHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEE
Confidence            7      788888874  7999999997653   2356678999999999999999998 75 899974

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.69  E-value=4.8e-16  Score=122.07  Aligned_cols=116  Identities=17%  Similarity=0.227  Sum_probs=89.2

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCC-CChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG-SSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      |+++||||+||||+++++.|++.|   ++|++++|.... ....+.+....               ..++.++.+|+++.
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~Dl~~~   62 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNG---HDVIILDNLCNSKRSVLPVIERLG---------------GKHPTFVEGDIRNE   62 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCTTHHHHHHHHH---------------TSCCEEEECCTTCH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCC---CEEEEEecCCCcchhHHHHHHhhc---------------CCcceEEEccCCCH
Confidence            479999999999999999999999   588888875322 22222222110               14678899999997


Q ss_pred             CCCCCHHHHHHHhc--CCcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        116 HLGLSEDSEQLIKS--KVNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       116 ~~~~~~~~~~~~~~--~~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                            +.+..+++  ++|+|||+||.....   ..+..++++|+.++.++++++++. ++++|||+
T Consensus        63 ------~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~  122 (338)
T 1udb_A           63 ------ALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNFIFS  122 (338)
T ss_dssp             ------HHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEE
T ss_pred             ------HHHHHHhhccCCCEEEECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEE
Confidence                  67877776  599999999976432   345568899999999999999987 88899984

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.68  E-value=1.4e-16  Score=125.11  Aligned_cols=119  Identities=19%  Similarity=0.356  Sum_probs=91.2

Q ss_pred             ceEEEecCCcchHHHHHHHHHhh-CCCc--CeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRS-FPDI--GAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~-g~~~--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      |+|+||||+||||+++++.|++. |+++  ++|++++|....... +.+.         .+    . ...++.++.+|++
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~-~~~~---------~~----~-~~~~~~~~~~Dl~   65 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNR-ANLA---------PV----D-ADPRLRFVHGDIR   65 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCG-GGGG---------GG----T-TCTTEEEEECCTT
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCch-hhhh---------hc----c-cCCCeEEEEcCCC
Confidence            57999999999999999999996 3221  489999986532111 0010         00    0 1257889999999


Q ss_pred             CCCCCCCHHHHHHHhcCCcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        114 SEHLGLSEDSEQLIKSKVNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      +.      +.+..++.++|+|||+||.....   .+++.++++|+.++.+++++|.+. +++||||+
T Consensus        66 d~------~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~-~~~~~v~~  125 (337)
T 1r6d_A           66 DA------GLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA-GVGRVVHV  125 (337)
T ss_dssp             CH------HHHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT-TCCEEEEE
T ss_pred             CH------HHHHHHhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEe
Confidence            98      78888899999999999986532   345678999999999999999998 88999984

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.68  E-value=3.8e-17  Score=132.59  Aligned_cols=129  Identities=23%  Similarity=0.303  Sum_probs=88.0

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      ..+|+|+||||+||||+++++.|++.|   .+|++++|++.......++.+.+.....+..   ......++.++.+|+.
T Consensus        67 ~~~~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~---~~~~~~~v~~v~~Dl~  140 (427)
T 4f6c_A           67 RPLGNTLLTGATGFLGAYLIEALQGYS---HRIYCFIRADNEEIAWYKLMTNLNDYFSEET---VEMMLSNIEVIVGDFE  140 (427)
T ss_dssp             CCCEEEEEECTTSHHHHHHHHHHTTTE---EEEEEEEECSSHHHHHHHHHHHHHHHSCHHH---HHHHHTTEEEEEECC-
T ss_pred             CCCCEEEEecCCcHHHHHHHHHHHcCC---CEEEEEECCCChHHHHHHHHHHHHHhccccc---cccccCceEEEeCCCC
Confidence            457899999999999999999999888   6999999987532233333333221100000   0001267999999999


Q ss_pred             CCCCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        114 SEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      +..      .+. .+.++|+|||+||......++...+++|+.++.+++++|.+  ++++|||+
T Consensus       141 d~~------~l~-~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~--~~~~~v~~  195 (427)
T 4f6c_A          141 CMD------DVV-LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ--HHARLIYV  195 (427)
T ss_dssp             --C------CCC-CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH--TTCEEEEE
T ss_pred             Ccc------cCC-CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh--cCCcEEEE
Confidence            952      223 56789999999999877777888999999999999999998  56889884

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.68  E-value=2.5e-16  Score=122.44  Aligned_cols=110  Identities=18%  Similarity=0.280  Sum_probs=88.7

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+++||||+||||+++++.|++.|   ++|++++|......  +                   ....++.++.+|+++. 
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~r~~~~~~--~-------------------~~~~~~~~~~~Dl~~~-   55 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARG---LEVAVLDNLATGKR--E-------------------NVPKGVPFFRVDLRDK-   55 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTT---CEEEEECCCSSCCG--G-------------------GSCTTCCEECCCTTCH-
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCC---CEEEEEECCCcCch--h-------------------hcccCeEEEECCCCCH-
Confidence            479999999999999999999999   58898888542210  0                   0013577899999997 


Q ss_pred             CCCCHHHHHHHhc--CCcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        117 LGLSEDSEQLIKS--KVNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       117 ~~~~~~~~~~~~~--~~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                           +.+..+++  ++|+|||+|+....   ..++...+++|+.++.+++++|++. ++++|||+
T Consensus        56 -----~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~iv~~  115 (311)
T 2p5y_A           56 -----EGVERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQY-GVEKLVFA  115 (311)
T ss_dssp             -----HHHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEE
T ss_pred             -----HHHHHHHHhcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEe
Confidence                 77888887  89999999997653   2446678999999999999999998 88999984

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.68  E-value=5.3e-16  Score=117.28  Aligned_cols=120  Identities=16%  Similarity=0.143  Sum_probs=89.6

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +.+|+++||||+|+||.++++.|++.|   ++|++.+++... .. +.+.+....            ...++.++.+|++
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G---~~V~~~~~~~~~-~~-~~~~~~~~~------------~~~~~~~~~~Dv~   64 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEG---YNVAVNYAGSKE-KA-EAVVEEIKA------------KGVDSFAIQANVA   64 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHH-HH-HHHHHHHHH------------TTSCEEEEECCTT
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCCHH-HH-HHHHHHHHh------------cCCcEEEEEccCC
Confidence            467999999999999999999999999   688888775421 11 122211111            2357889999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHH----HhcCCCCCce
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLA----KECVNLKRFC  175 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v  175 (177)
                      +.      +++..+++       ++|++|||||...       ..++|+..+++|+.++.++++.+    ++. +..+||
T Consensus        65 d~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~iv  137 (246)
T 3osu_A           65 DA------DEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQ-RSGAII  137 (246)
T ss_dssp             CH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEE
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEE
Confidence            98      66666554       7999999999753       24678889999999999999988    344 556777


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       138 ~i  139 (246)
T 3osu_A          138 NL  139 (246)
T ss_dssp             EE
T ss_pred             EE
Confidence            64

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.68  E-value=1.6e-16  Score=127.47  Aligned_cols=123  Identities=14%  Similarity=0.094  Sum_probs=88.7

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCC--------------ChHHHHHHHHhhhhhhcccccC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGS--------------SPEERVKNMLNSVIFDRLNKEV   98 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~   98 (177)
                      ..++++|+||||+||||+++++.|++.|   ++|++++|.....              ...+.+......          
T Consensus         8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----------   74 (404)
T 1i24_A            8 HHHGSRVMVIGGDGYCGWATALHLSKKN---YEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKAL----------   74 (404)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHH----------
T ss_pred             ccCCCeEEEeCCCcHHHHHHHHHHHhCC---CeEEEEEecCccccccccccccccccchhhhhhhhHhhc----------
Confidence            3468899999999999999999999999   5899998742110              001111111100          


Q ss_pred             cccCCCeEEEeCCCCCCCCCCCHHHHHHHhcC--CcEEEEcCcccCch------HHHHHHHHHhHHHHHHHHHHHHhcCC
Q psy17489         99 PDFRSKIQVIPSNLESEHLGLSEDSEQLIKSK--VNIIFHCAASLRFD------EALQKAIRANLYATKQMLNLAKECVN  170 (177)
Q Consensus        99 ~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~--~d~vi~~aa~~~~~------~~~~~~~~~nv~~~~~ll~~~~~~~~  170 (177)
                        ...++.++.+|+++.      +.+..++++  +|+|||+||.....      ..+..++++|+.++.+++++|++. +
T Consensus        75 --~~~~v~~~~~Dl~d~------~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~  145 (404)
T 1i24_A           75 --TGKSIELYVGDICDF------EFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF-G  145 (404)
T ss_dssp             --HCCCCEEEESCTTSH------HHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH-C
T ss_pred             --cCCceEEEECCCCCH------HHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHh-C
Confidence              124688999999997      778888876  99999999976432      223457899999999999999988 6


Q ss_pred             C-CCceeC
Q psy17489        171 L-KRFCEL  177 (177)
Q Consensus       171 ~-~~~v~v  177 (177)
                      + ++|||+
T Consensus       146 ~~~~~V~~  153 (404)
T 1i24_A          146 EECHLVKL  153 (404)
T ss_dssp             TTCEEEEE
T ss_pred             CCcEEEEe
Confidence            6 589874

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.68  E-value=1.7e-16  Score=123.28  Aligned_cols=108  Identities=21%  Similarity=0.262  Sum_probs=87.7

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+|+||||+||||+++++.|++.|   ++|++++|.......                     ....++.++.+|+.+. 
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~---------------------~~~~~~~~~~~Dl~d~-   55 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELG---YEVVVVDNLSSGRRE---------------------FVNPSAELHVRDLKDY-   55 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT---CEEEEECCCSSCCGG---------------------GSCTTSEEECCCTTST-
T ss_pred             CEEEEECCCChHHHHHHHHHHhCC---CEEEEEeCCCCCchh---------------------hcCCCceEEECccccH-
Confidence            589999999999999999999999   589999987643210                     0125788999999997 


Q ss_pred             CCCCHHHHHHHhcCCcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        117 LGLSEDSEQLIKSKVNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       117 ~~~~~~~~~~~~~~~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                           + +..++++ |+|||+|+....   ..++...+++|+.++.+++++|++. ++++|||+
T Consensus        56 -----~-~~~~~~~-d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~  111 (312)
T 3ko8_A           56 -----S-WGAGIKG-DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQT-GVRTVVFA  111 (312)
T ss_dssp             -----T-TTTTCCC-SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEE
T ss_pred             -----H-HHhhcCC-CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEe
Confidence                 4 5566666 999999996432   3456778899999999999999998 88999984

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.68  E-value=1e-15  Score=117.33  Aligned_cols=118  Identities=14%  Similarity=0.073  Sum_probs=91.8

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      ..+++|+++||||+|+||.++++.|++.|   ++|++.+|+...  ..+...+.                ..++.++.+|
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~--~~~~~~~~----------------~~~~~~~~~D   65 (271)
T 3tzq_B            7 AELENKVAIITGACGGIGLETSRVLARAG---ARVVLADLPETD--LAGAAASV----------------GRGAVHHVVD   65 (271)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECTTSC--HHHHHHHH----------------CTTCEEEECC
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEcCCHHH--HHHHHHHh----------------CCCeEEEECC
Confidence            35678999999999999999999999999   689999987632  22222211                2568899999


Q ss_pred             CCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC---------chHHHHHHHHHhHHHHHHHHHHH----HhcCCC
Q psy17489        112 LESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR---------FDEALQKAIRANLYATKQMLNLA----KECVNL  171 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~---------~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~  171 (177)
                      +++.      +++..+++       ++|++|||||...         ..+.|+..+++|+.++.++++++    ++. +.
T Consensus        66 v~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~  138 (271)
T 3tzq_B           66 LTNE------VSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISA-GG  138 (271)
T ss_dssp             TTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred             CCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CC
Confidence            9998      66666654       7999999999752         14677889999999999999988    444 55


Q ss_pred             CCceeC
Q psy17489        172 KRFCEL  177 (177)
Q Consensus       172 ~~~v~v  177 (177)
                      .+||++
T Consensus       139 g~iv~i  144 (271)
T 3tzq_B          139 GAIVNI  144 (271)
T ss_dssp             EEEEEE
T ss_pred             CEEEEE
Confidence            677764

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.67  E-value=2.3e-17  Score=136.74  Aligned_cols=128  Identities=23%  Similarity=0.310  Sum_probs=88.5

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      .+|+|+||||+||||+++++.|.+.|   ++|++++|+........++.+.+........   ......++.++.+|+.+
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g---~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~---~~~~~~~v~~v~~Dl~d  222 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYS---HRIYCFIRADNEEIAWYKLMTNLNDYFSEET---VEMMLSNIEVIVGDFEC  222 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTE---EEEEEEEESSSHHHHHHHHHHHHHHHSCHHH---HHHHSTTEEEEEEBTTB
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcC---CEEEEEECCCChHHHHHHHHHHHHHhccccc---chhccCceEEEecCCcc
Confidence            46899999999999999999998887   6999999987533222333332221100000   00123689999999999


Q ss_pred             CCCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        115 EHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      ..      .+. ...++|+|||+||......++..++++|+.++.+++++|.+  +.++|||+
T Consensus       223 ~~------~l~-~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~--~~~~~v~i  276 (508)
T 4f6l_B          223 MD------DVV-LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ--HHARLIYV  276 (508)
T ss_dssp             CS------SCC-CSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHT--TTCEEEEE
T ss_pred             cc------cCC-CccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh--CCCcEEEe
Confidence            52      222 56789999999998876677777899999999999999988  45789885

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.67  E-value=2.3e-15  Score=116.57  Aligned_cols=123  Identities=20%  Similarity=0.255  Sum_probs=91.9

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      ..+++|+++||||+|+||.++++.|++.|   ++|++.+|+...  ..+...+...            ....++.++.+|
T Consensus        43 ~~l~gk~vlVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~--~~~~~~~~~~------------~~~~~~~~~~~D  105 (291)
T 3ijr_A           43 EKLKGKNVLITGGDSGIGRAVSIAFAKEG---ANIAIAYLDEEG--DANETKQYVE------------KEGVKCVLLPGD  105 (291)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCHH--HHHHHHHHHH------------TTTCCEEEEESC
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCchH--HHHHHHHHHH------------hcCCcEEEEECC
Confidence            34689999999999999999999999999   689999987521  1122222221            123578899999


Q ss_pred             CCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHhc-CCCCCce
Q psy17489        112 LESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKEC-VNLKRFC  175 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v  175 (177)
                      +++.      +++..+++       ++|++|||||...        ..++|+..+++|+.++.++++++... .+..+||
T Consensus       106 v~d~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv  179 (291)
T 3ijr_A          106 LSDE------QHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVII  179 (291)
T ss_dssp             TTSH------HHHHHHHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEE
T ss_pred             CCCH------HHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEE
Confidence            9998      56666554       7899999999642        24678889999999999999999764 1234666


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       180 ~i  181 (291)
T 3ijr_A          180 NT  181 (291)
T ss_dssp             EE
T ss_pred             EE
Confidence            53

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.67  E-value=1e-15  Score=116.84  Aligned_cols=110  Identities=12%  Similarity=0.161  Sum_probs=89.0

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|+....                        ...++.++.+|++
T Consensus        26 ~~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~------------------------~~~~~~~~~~Dv~   78 (260)
T 3un1_A           26 NQQKVVVITGASQGIGAGLVRAYRDRN---YRVVATSRSIKPS------------------------ADPDIHTVAGDIS   78 (260)
T ss_dssp             TTCCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESSCCCC------------------------SSTTEEEEESCTT
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCChhhc------------------------ccCceEEEEccCC
Confidence            578999999999999999999999999   6999999976432                        1246889999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCce
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAK----ECVNLKRFC  175 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v  175 (177)
                      +.      +++..+++       ++|++|||||...       ..+.|+..+++|+.++.++++++.    +. +..++|
T Consensus        79 d~------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv  151 (260)
T 3un1_A           79 KP------ETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQ-GSGHIV  151 (260)
T ss_dssp             SH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEE
T ss_pred             CH------HHHHHHHHHHHHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEE
Confidence            98      66666654       7999999999753       246788899999999999999873    44 556777


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       152 ~i  153 (260)
T 3un1_A          152 SI  153 (260)
T ss_dssp             EE
T ss_pred             EE
Confidence            63

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.67  E-value=1.3e-15  Score=115.82  Aligned_cols=121  Identities=17%  Similarity=0.203  Sum_probs=90.3

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   ++|++.+|+.      +.+.+....         ......++.++.+|+
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~------~~~~~~~~~---------~~~~~~~~~~~~~Dv   64 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEG---ARVVITGRTK------EKLEEAKLE---------IEQFPGQILTVQMDV   64 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHHH---------HCCSTTCEEEEECCT
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCH------HHHHHHHHH---------HHhcCCcEEEEEccC
Confidence            4678999999999999999999999999   6899999865      222222111         111235789999999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh----cCCCCCc
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE----CVNLKRF  174 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~  174 (177)
                      ++.      +++..+++       ++|++|||||...       ..+.|+..+++|+.++.++++++.+    .++..++
T Consensus        65 ~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~i  138 (257)
T 3imf_A           65 RNT------DDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNI  138 (257)
T ss_dssp             TCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEE
T ss_pred             CCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEE
Confidence            998      56666554       7899999999642       2467888999999999999998732    2245567


Q ss_pred             eeC
Q psy17489        175 CEL  177 (177)
Q Consensus       175 v~v  177 (177)
                      |++
T Consensus       139 v~i  141 (257)
T 3imf_A          139 INM  141 (257)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            763

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.67  E-value=3.5e-16  Score=121.75  Aligned_cols=104  Identities=22%  Similarity=0.289  Sum_probs=87.0

Q ss_pred             eEEEecCCcchHHHHHHHHHhh--CCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         38 QILVTGGTGFMGKLLIDKLLRS--FPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        38 ~vlVtG~~G~iG~~l~~~L~~~--g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +|+||||+||||+++++.|++.  |   ++|++++|+....                          .++.++.+|+.+.
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g---~~V~~~~r~~~~~--------------------------~~~~~~~~D~~d~   51 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGK---KNVIASDIVQRDT--------------------------GGIKFITLDVSNR   51 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCG---GGEEEEESSCCCC--------------------------TTCCEEECCTTCH
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCC---CEEEEecCCCccc--------------------------cCceEEEecCCCH
Confidence            4899999999999999999998  6   5899998865321                          1456889999997


Q ss_pred             CCCCCHHHHHHHhc--CCcEEEEcCcccCc--hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        116 HLGLSEDSEQLIKS--KVNIIFHCAASLRF--DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       116 ~~~~~~~~~~~~~~--~~d~vi~~aa~~~~--~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                            +.+..+++  ++|+|||+|+....  ..+++.++++|+.++.+++++|++. ++++|||+
T Consensus        52 ------~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~  110 (317)
T 3ajr_A           52 ------DEIDRAVEKYSIDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQH-RVEKVVIP  110 (317)
T ss_dssp             ------HHHHHHHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEE
T ss_pred             ------HHHHHHHhhcCCcEEEECCcccCCccccChHHHhhhhhHHHHHHHHHHHHc-CCCEEEEe
Confidence                  78888887  89999999997542  2456678999999999999999998 88999984

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.67  E-value=2.9e-16  Score=123.38  Aligned_cols=111  Identities=13%  Similarity=0.222  Sum_probs=88.4

Q ss_pred             ceEEEecCCcchHHHHHHHHHhh-CCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRS-FPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~-g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      |+|+||||+||||+++++.|++. |   ++|++++|+....      ..         +   .  ...++.++.+|+.+.
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g---~~V~~~~r~~~~~------~~---------~---~--~~~~~~~~~~D~~~~   57 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDH---YEVYGLDIGSDAI------SR---------F---L--NHPHFHFVEGDISIH   57 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTT---CEEEEEESCCGGG------GG---------G---T--TCTTEEEEECCTTTC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCC---CEEEEEeCCcchH------HH---------h---h--cCCCeEEEeccccCc
Confidence            58999999999999999999997 7   5899999975321      00         0   0  124789999999985


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      .     +.+..+++++|+|||+||....   ..++..++++|+.++.+++++|++. + ++|||+
T Consensus        58 ~-----~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~v~~  115 (345)
T 2bll_A           58 S-----EWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRIIFP  115 (345)
T ss_dssp             S-----HHHHHHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEE
T ss_pred             H-----HHHHhhccCCCEEEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHh-C-CeEEEE
Confidence            2     4677788899999999997653   2456678899999999999999998 6 899874

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.67  E-value=9.4e-16  Score=117.40  Aligned_cols=118  Identities=17%  Similarity=0.220  Sum_probs=89.4

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      ..+++|+++||||+|+||.++++.|++.|   ++|++.+|+.      +.+.+....            ...++.++.+|
T Consensus        23 ~~l~gk~vlVTGas~gIG~aia~~la~~G---~~V~~~~r~~------~~~~~~~~~------------~~~~~~~~~~D   81 (266)
T 3grp_A           23 FKLTGRKALVTGATGGIGEAIARCFHAQG---AIVGLHGTRE------DKLKEIAAD------------LGKDVFVFSAN   81 (266)
T ss_dssp             TCCTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHHH------------HCSSEEEEECC
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCH------HHHHHHHHH------------hCCceEEEEee
Confidence            34689999999999999999999999999   6899888864      223322211            12578899999


Q ss_pred             CCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh----cCCCCC
Q psy17489        112 LESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE----CVNLKR  173 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~  173 (177)
                      +++.      +++..+++       ++|++|||||...       ..++|+..+++|+.++.++.+.+..    . +..+
T Consensus        82 v~d~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~  154 (266)
T 3grp_A           82 LSDR------KSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRR-RYGR  154 (266)
T ss_dssp             TTSH------HHHHHHHHHHHHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEE
T ss_pred             cCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCcE
Confidence            9998      66666554       7999999999753       2467888999999998888776643    3 4567


Q ss_pred             ceeC
Q psy17489        174 FCEL  177 (177)
Q Consensus       174 ~v~v  177 (177)
                      ||++
T Consensus       155 Iv~i  158 (266)
T 3grp_A          155 IINI  158 (266)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            7764

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.67  E-value=1.2e-15  Score=116.84  Aligned_cols=126  Identities=15%  Similarity=0.160  Sum_probs=90.3

Q ss_pred             cccccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEE
Q psy17489         29 KVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVI  108 (177)
Q Consensus        29 ~~~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  108 (177)
                      .....+++|+++||||+|+||.++++.|++.|   ++|++++|+..      .+......     +.   .....++.++
T Consensus        14 ~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~------~~~~~~~~-----l~---~~~~~~~~~~   76 (267)
T 1vl8_A           14 KEVFDLRGRVALVTGGSRGLGFGIAQGLAEAG---CSVVVASRNLE------EASEAAQK-----LT---EKYGVETMAF   76 (267)
T ss_dssp             ---CCCTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHH------HHHHHHHH-----HH---HHHCCCEEEE
T ss_pred             CCCcCCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHH------HHHHHHHH-----HH---HhcCCeEEEE
Confidence            33455788999999999999999999999999   68999998642      22211110     00   0012468889


Q ss_pred             eCCCCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CCC
Q psy17489        109 PSNLESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VNL  171 (177)
Q Consensus       109 ~~D~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~  171 (177)
                      .+|+++.      +++..+++       ++|++|||||....       .+.|+..+++|+.++.++++++...   .+.
T Consensus        77 ~~Dl~~~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~  150 (267)
T 1vl8_A           77 RCDVSNY------EEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDN  150 (267)
T ss_dssp             ECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSS
T ss_pred             EcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC
Confidence            9999997      66666554       79999999997532       3567889999999999998887431   256


Q ss_pred             CCceeC
Q psy17489        172 KRFCEL  177 (177)
Q Consensus       172 ~~~v~v  177 (177)
                      .+||++
T Consensus       151 g~iv~i  156 (267)
T 1vl8_A          151 PSIINI  156 (267)
T ss_dssp             CEEEEE
T ss_pred             cEEEEE
Confidence            788764

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.67  E-value=2.3e-16  Score=115.30  Aligned_cols=107  Identities=9%  Similarity=0.085  Sum_probs=87.4

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +|+++||||+|+||+++++.|++.|   ++|++++|++....                     .....++.++.+|+.+.
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g---~~V~~~~r~~~~~~---------------------~~~~~~~~~~~~D~~~~   58 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAG---YEVTVLVRDSSRLP---------------------SEGPRPAHVVVGDVLQA   58 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCGGGSC---------------------SSSCCCSEEEESCTTSH
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCC---CeEEEEEeChhhcc---------------------cccCCceEEEEecCCCH
Confidence            4799999999999999999999998   69999999753210                     00125788999999998


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                            +.+..+++++|+|||+|+..... +   ..++|+.++.++++++++. ++++|||+
T Consensus        59 ------~~~~~~~~~~d~vi~~a~~~~~~-~---~~~~n~~~~~~~~~~~~~~-~~~~~v~~  109 (206)
T 1hdo_A           59 ------ADVDKTVAGQDAVIVLLGTRNDL-S---PTTVMSEGARNIVAAMKAH-GVDKVVAC  109 (206)
T ss_dssp             ------HHHHHHHTTCSEEEECCCCTTCC-S---CCCHHHHHHHHHHHHHHHH-TCCEEEEE
T ss_pred             ------HHHHHHHcCCCEEEECccCCCCC-C---ccchHHHHHHHHHHHHHHh-CCCeEEEE
Confidence                  78999999999999999975431 1   2358899999999999998 88899974

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.66  E-value=6.7e-16  Score=117.57  Aligned_cols=118  Identities=17%  Similarity=0.179  Sum_probs=89.8

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   ++|++.+|+.      +...+....            ...++.++.+|+
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~------~~~~~~~~~------------~~~~~~~~~~D~   63 (259)
T 4e6p_A            5 RLEGKSALITGSARGIGRAFAEAYVREG---ATVAIADIDI------ERARQAAAE------------IGPAAYAVQMDV   63 (259)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHHH------------HCTTEEEEECCT
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCH------HHHHHHHHH------------hCCCceEEEeeC
Confidence            4678999999999999999999999999   6899998864      222222211            124678999999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc----CCCCCc
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC----VNLKRF  174 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~  174 (177)
                      ++.      +++..+++       ++|++|||||...       ..+.|+..+++|+.++.++++++.+.    +...++
T Consensus        64 ~~~------~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~i  137 (259)
T 4e6p_A           64 TRQ------DSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKI  137 (259)
T ss_dssp             TCH------HHHHHHHHHHHHHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEE
T ss_pred             CCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEE
Confidence            998      66666655       7999999999753       24678889999999999999987543    113466


Q ss_pred             eeC
Q psy17489        175 CEL  177 (177)
Q Consensus       175 v~v  177 (177)
                      |++
T Consensus       138 v~i  140 (259)
T 4e6p_A          138 INM  140 (259)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            653

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.66  E-value=1.2e-15  Score=117.46  Aligned_cols=118  Identities=11%  Similarity=0.099  Sum_probs=90.0

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   ++|++++|+.      +.+.+....            ...++.++.+|+
T Consensus        24 ~l~~k~vlVTGas~GIG~aia~~l~~~G---~~V~~~~r~~------~~~~~~~~~------------~~~~~~~~~~Dv   82 (277)
T 4dqx_A           24 DLNQRVCIVTGGGSGIGRATAELFAKNG---AYVVVADVNE------DAAVRVANE------------IGSKAFGVRVDV   82 (277)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSH------HHHHHHHHH------------HCTTEEEEECCT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCH------HHHHHHHHH------------hCCceEEEEecC
Confidence            3678999999999999999999999999   6899999864      222222221            125788999999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCce
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFC  175 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v  175 (177)
                      ++.      ++++.+++       ++|++|||||...       ..+.|+..+++|+.++.++++.+...   .+..++|
T Consensus        83 ~d~------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv  156 (277)
T 4dqx_A           83 SSA------KDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSII  156 (277)
T ss_dssp             TCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEE
T ss_pred             CCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEE
Confidence            998      66666554       7999999999743       24678889999999999999887542   1445777


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       157 ~i  158 (277)
T 4dqx_A          157 NT  158 (277)
T ss_dssp             EE
T ss_pred             EE
Confidence            64

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.66  E-value=1e-15  Score=117.85  Aligned_cols=123  Identities=16%  Similarity=0.172  Sum_probs=87.6

Q ss_pred             cccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489         31 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS  110 (177)
Q Consensus        31 ~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  110 (177)
                      ..++++|+++||||+|+||.++++.|++.|   ++|++++|+.      +.+......     +    .....++.++.+
T Consensus        19 ~~m~~~k~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~------~~~~~~~~~-----l----~~~~~~~~~~~~   80 (279)
T 3sju_A           19 SHMSRPQTAFVTGVSSGIGLAVARTLAARG---IAVYGCARDA------KNVSAAVDG-----L----RAAGHDVDGSSC   80 (279)
T ss_dssp             ------CEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHHH-----H----HTTTCCEEEEEC
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCH------HHHHHHHHH-----H----HhcCCcEEEEEC
Confidence            345678999999999999999999999999   6899999864      222221111     0    112357899999


Q ss_pred             CCCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc-----CCC
Q psy17489        111 NLESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC-----VNL  171 (177)
Q Consensus       111 D~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~-----~~~  171 (177)
                      |+++.      +++..+++       ++|++|||||...       ..+.|+..+++|+.++.++++.+...     .+.
T Consensus        81 Dv~d~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~  154 (279)
T 3sju_A           81 DVTST------DEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGW  154 (279)
T ss_dssp             CTTCH------HHHHHHHHHHHHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTC
T ss_pred             CCCCH------HHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCC
Confidence            99998      56665543       7899999999753       24678889999999999999987551     144


Q ss_pred             CCceeC
Q psy17489        172 KRFCEL  177 (177)
Q Consensus       172 ~~~v~v  177 (177)
                      .+||++
T Consensus       155 g~iV~i  160 (279)
T 3sju_A          155 GRIVNI  160 (279)
T ss_dssp             EEEEEE
T ss_pred             cEEEEE
Confidence            577764

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.66  E-value=2.4e-15  Score=115.42  Aligned_cols=119  Identities=13%  Similarity=0.148  Sum_probs=87.7

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|+...  . +.+.+....            ...++.++.+|++
T Consensus        32 l~~k~vlITGasggIG~~la~~L~~~G---~~V~~~~r~~~~--~-~~~~~~~~~------------~~~~~~~~~~Dl~   93 (279)
T 3ctm_A           32 LKGKVASVTGSSGGIGWAVAEAYAQAG---ADVAIWYNSHPA--D-EKAEHLQKT------------YGVHSKAYKCNIS   93 (279)
T ss_dssp             CTTCEEEETTTTSSHHHHHHHHHHHHT---CEEEEEESSSCC--H-HHHHHHHHH------------HCSCEEEEECCTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHHh------------cCCcceEEEeecC
Confidence            678999999999999999999999999   689999987643  2 222222111            1246889999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc---------hHHHHHHHHHhHHHHH----HHHHHHHhcCCCCC
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF---------DEALQKAIRANLYATK----QMLNLAKECVNLKR  173 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~---------~~~~~~~~~~nv~~~~----~ll~~~~~~~~~~~  173 (177)
                      +.      +++..+++       ++|+|||+||....         .+.++..+++|+.++.    .+++.+++. +.++
T Consensus        94 ~~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~~~  166 (279)
T 3ctm_A           94 DP------KSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKN-GKGS  166 (279)
T ss_dssp             CH------HHHHHHHHHHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCE
T ss_pred             CH------HHHHHHHHHHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCe
Confidence            97      56666554       59999999996432         2456778999999955    555556655 6678


Q ss_pred             ceeC
Q psy17489        174 FCEL  177 (177)
Q Consensus       174 ~v~v  177 (177)
                      ||++
T Consensus       167 iv~i  170 (279)
T 3ctm_A          167 LIIT  170 (279)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            8874

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.66  E-value=3.5e-16  Score=121.03  Aligned_cols=117  Identities=15%  Similarity=0.233  Sum_probs=93.7

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   ++|++.+|+.      +...+....            ...++.++.+|+
T Consensus        13 ~l~gk~vlVTGas~gIG~~~a~~L~~~G---~~V~~~~r~~------~~~~~~~~~------------~~~~~~~~~~Dl   71 (291)
T 3rd5_A           13 SFAQRTVVITGANSGLGAVTARELARRG---ATVIMAVRDT------RKGEAAART------------MAGQVEVRELDL   71 (291)
T ss_dssp             CCTTCEEEEECCSSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHTT------------SSSEEEEEECCT
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEECCH------HHHHHHHHH------------hcCCeeEEEcCC
Confidence            3678999999999999999999999999   6899999875      223322221            125789999999


Q ss_pred             CCCCCCCCHHHHHHHhc---CCcEEEEcCcccCc-----hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        113 ESEHLGLSEDSEQLIKS---KVNIIFHCAASLRF-----DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~---~~d~vi~~aa~~~~-----~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      ++.      +++..+++   ++|++|||||....     .+.++..+++|+.++.++++++... ..+|+|++
T Consensus        72 ~d~------~~v~~~~~~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~-~~~riv~i  137 (291)
T 3rd5_A           72 QDL------SSVRRFADGVSGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPR-LTDRVVTV  137 (291)
T ss_dssp             TCH------HHHHHHHHTCCCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGG-EEEEEEEE
T ss_pred             CCH------HHHHHHHHhcCCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHhheeEe
Confidence            998      78888876   67999999997532     3566778999999999999999887 56677764

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.66  E-value=8.7e-16  Score=116.11  Aligned_cols=119  Identities=12%  Similarity=0.140  Sum_probs=89.8

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|+...  . +.+.+...            ....++.++.+|++
T Consensus         9 ~~~~~vlVtGasggiG~~la~~l~~~G---~~V~~~~r~~~~--~-~~~~~~~~------------~~~~~~~~~~~D~~   70 (255)
T 1fmc_A            9 LDGKCAIITGAGAGIGKEIAITFATAG---ASVVVSDINADA--A-NHVVDEIQ------------QLGGQAFACRCDIT   70 (255)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHTTT---CEEEEEESCHHH--H-HHHHHHHH------------HTTCCEEEEECCTT
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCC---CEEEEEcCCHHH--H-HHHHHHHH------------HhCCceEEEEcCCC
Confidence            578999999999999999999999999   589999986421  1 11111111            01256888999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc------hHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCcee
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF------DEALQKAIRANLYATKQMLNLAK----ECVNLKRFCE  176 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~------~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~  176 (177)
                      ++      +.+..+++       ++|+|||+||....      .+.++..+++|+.++.++++.+.    +. +.++||+
T Consensus        71 ~~------~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~iv~  143 (255)
T 1fmc_A           71 SE------QELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKN-GGGVILT  143 (255)
T ss_dssp             CH------HHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEE
T ss_pred             CH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEE
Confidence            97      66766654       89999999997532      46678889999999999998875    33 5677776


Q ss_pred             C
Q psy17489        177 L  177 (177)
Q Consensus       177 v  177 (177)
                      +
T Consensus       144 ~  144 (255)
T 1fmc_A          144 I  144 (255)
T ss_dssp             E
T ss_pred             E
Confidence            4

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.66  E-value=1.1e-15  Score=116.11  Aligned_cols=120  Identities=10%  Similarity=0.077  Sum_probs=90.5

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   .+|++++|+...  . +.+.+.+..            ...++.++.+|+
T Consensus         4 ~~~~k~vlVTGas~GIG~aia~~l~~~G---~~V~~~~r~~~~--~-~~~~~~~~~------------~~~~~~~~~~Dv   65 (252)
T 3h7a_A            4 TPRNATVAVIGAGDYIGAEIAKKFAAEG---FTVFAGRRNGEK--L-APLVAEIEA------------AGGRIVARSLDA   65 (252)
T ss_dssp             -CCSCEEEEECCSSHHHHHHHHHHHHTT---CEEEEEESSGGG--G-HHHHHHHHH------------TTCEEEEEECCT
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHHh------------cCCeEEEEECcC
Confidence            3578999999999999999999999999   689999997532  2 222222111            235788999999


Q ss_pred             CCCCCCCCHHHHHHHhc------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh----cCCCCCce
Q psy17489        113 ESEHLGLSEDSEQLIKS------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE----CVNLKRFC  175 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v  175 (177)
                      ++.      +++..+++      ++|++|||||...       ..++|+..+++|+.++.++++.+..    . +..++|
T Consensus        66 ~~~------~~v~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv  138 (252)
T 3h7a_A           66 RNE------DEVTAFLNAADAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAH-GQGKIF  138 (252)
T ss_dssp             TCH------HHHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEE
T ss_pred             CCH------HHHHHHHHHHHhhCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEE
Confidence            998      67776665      6899999999753       2467888999999999999887743    3 445777


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       139 ~i  140 (252)
T 3h7a_A          139 FT  140 (252)
T ss_dssp             EE
T ss_pred             EE
Confidence            64

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.66  E-value=1.2e-15  Score=130.86  Aligned_cols=120  Identities=17%  Similarity=0.233  Sum_probs=92.9

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCC-hHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSS-PEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      .+++|+|+||||+||||+++++.|++.|   ++|++++|+..... ..+++....               ..++.++.+|
T Consensus         8 ~~~~~~ilVTGatG~IG~~l~~~L~~~G---~~V~~~~r~~~~~~~~~~~l~~~~---------------~~~v~~v~~D   69 (699)
T 1z45_A            8 ESTSKIVLVTGGAGYIGSHTVVELIENG---YDCVVADNLSNSTYDSVARLEVLT---------------KHHIPFYEVD   69 (699)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCTHHHHHHHHHH---------------TSCCCEEECC
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCc---CEEEEEECCCcchHHHHHHHhhcc---------------CCceEEEEcC
Confidence            3567899999999999999999999998   58999998754322 111222110               1467889999


Q ss_pred             CCCCCCCCCHHHHHHHhc--CCcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        112 LESEHLGLSEDSEQLIKS--KVNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~--~~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      +.+.      +.+..+++  ++|+|||+||.....   ....+++++|+.++.+++++|++. ++++|||+
T Consensus        70 l~d~------~~l~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~~~iV~~  133 (699)
T 1z45_A           70 LCDR------KGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY-NVSKFVFS  133 (699)
T ss_dssp             TTCH------HHHHHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEE
T ss_pred             CCCH------HHHHHHHHhCCCCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEE
Confidence            9998      78888887  899999999986532   234568899999999999999998 88999985

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.66  E-value=6.9e-16  Score=118.63  Aligned_cols=116  Identities=9%  Similarity=0.222  Sum_probs=87.2

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +.+|+++||||+|+||+++++.|++.|   ++|++++|+...  . +.+...               ...++.++.+|++
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G---~~V~~~~r~~~~--~-~~~~~~---------------~~~~~~~~~~Dv~   61 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAG---DTVIGTARRTEA--L-DDLVAA---------------YPDRAEAISLDVT   61 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSGGG--G-HHHHHH---------------CTTTEEEEECCTT
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHh---------------ccCCceEEEeeCC
Confidence            357899999999999999999999999   689999987532  1 111111               1257899999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHH----HhcCCCCCce
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLA----KECVNLKRFC  175 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v  175 (177)
                      +.      +++..+++       ++|+||||||...       ..++++..+++|+.++.++.+.+    ++. +..+||
T Consensus        62 ~~------~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~~~iv  134 (281)
T 3m1a_A           62 DG------ERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRER-GSGSVV  134 (281)
T ss_dssp             CH------HHHHHHHHHHHHHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEE
T ss_pred             CH------HHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEE
Confidence            98      66666654       7899999999753       24677889999999966665554    555 567888


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       135 ~~  136 (281)
T 3m1a_A          135 NI  136 (281)
T ss_dssp             EE
T ss_pred             EE
Confidence            64

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.66  E-value=7.8e-17  Score=124.01  Aligned_cols=105  Identities=15%  Similarity=0.156  Sum_probs=84.7

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      ++|+|+||| +||||+++++.|++.|   .+|++++|+....                         ..++.++.+|+.+
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g---~~V~~~~r~~~~~-------------------------~~~~~~~~~Dl~d   52 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQG---HEVTGLRRSAQPM-------------------------PAGVQTLIADVTR   52 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTT---CCEEEEECTTSCC-------------------------CTTCCEEECCTTC
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCC---CEEEEEeCCcccc-------------------------ccCCceEEccCCC
Confidence            467999999 5999999999999999   5899999976431                         2578899999999


Q ss_pred             CCCCCCHHHHHHHhcC-CcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        115 EHLGLSEDSEQLIKSK-VNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~-~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      .      +.+..++++ +|+|||+||...  .++..++++|+.++.+++++|++. +++||||+
T Consensus        53 ~------~~~~~~~~~~~d~vih~a~~~~--~~~~~~~~~n~~~~~~ll~a~~~~-~~~~~v~~  107 (286)
T 3gpi_A           53 P------DTLASIVHLRPEILVYCVAASE--YSDEHYRLSYVEGLRNTLSALEGA-PLQHVFFV  107 (286)
T ss_dssp             G------GGCTTGGGGCCSEEEECHHHHH--HC-----CCSHHHHHHHHHHTTTS-CCCEEEEE
T ss_pred             h------HHHHHhhcCCCCEEEEeCCCCC--CCHHHHHHHHHHHHHHHHHHHhhC-CCCEEEEE
Confidence            8      567777776 999999999742  445668899999999999999987 89999984

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.66  E-value=2e-15  Score=116.18  Aligned_cols=126  Identities=15%  Similarity=0.143  Sum_probs=92.2

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCC------ChHHHHHHHHhhhhhhcccccCcccCCCeE
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGS------SPEERVKNMLNSVIFDRLNKEVPDFRSKIQ  106 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  106 (177)
                      .+++|+++||||+|+||.++++.|++.|   ++|++++|++...      ...+.+.+....         ......++.
T Consensus         7 ~l~~k~~lVTGas~gIG~a~a~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~   74 (281)
T 3s55_A            7 DFEGKTALITGGARGMGRSHAVALAEAG---ADIAICDRCENSDVVGYPLATADDLAETVAL---------VEKTGRRCI   74 (281)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSCCTTCSSCCCCHHHHHHHHHH---------HHHTTCCEE
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCC---CeEEEEeCCccccccccccccHHHHHHHHHH---------HHhcCCeEE
Confidence            4678999999999999999999999999   6899999974321      011222222111         011235789


Q ss_pred             EEeCCCCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh----c
Q psy17489        107 VIPSNLESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE----C  168 (177)
Q Consensus       107 ~~~~D~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~----~  168 (177)
                      ++.+|+++.      +++..+++       ++|++|||||...       ..+.|+..+++|+.++.++++++..    .
T Consensus        75 ~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~  148 (281)
T 3s55_A           75 SAKVDVKDR------AALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKR  148 (281)
T ss_dssp             EEECCTTCH------HHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred             EEeCCCCCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence            999999998      66666554       7999999999753       2467888999999999999998643    3


Q ss_pred             CCCCCceeC
Q psy17489        169 VNLKRFCEL  177 (177)
Q Consensus       169 ~~~~~~v~v  177 (177)
                       +..++|++
T Consensus       149 -~~g~iv~i  156 (281)
T 3s55_A          149 -NYGRIVTV  156 (281)
T ss_dssp             -TCEEEEEE
T ss_pred             -CCCEEEEE
Confidence             44577764

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.66  E-value=3.2e-16  Score=117.90  Aligned_cols=112  Identities=17%  Similarity=0.177  Sum_probs=89.9

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhh--CCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRS--FPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~--g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      +++|+++||||+|+||+++++.|++.  |   ++|++++|++      ......                ..++.++.+|
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g---~~V~~~~r~~------~~~~~~----------------~~~~~~~~~D   56 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDK---FVAKGLVRSA------QGKEKI----------------GGEADVFIGD   56 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTT---CEEEEEESCH------HHHHHT----------------TCCTTEEECC
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCC---cEEEEEEcCC------Cchhhc----------------CCCeeEEEec
Confidence            35789999999999999999999998  6   6899999864      222111                1467789999


Q ss_pred             CCCCCCCCCHHHHHHHhcCCcEEEEcCcccCch----------------HHHHHHHHHhHHHHHHHHHHHHhcCCCCCce
Q psy17489        112 LESEHLGLSEDSEQLIKSKVNIIFHCAASLRFD----------------EALQKAIRANLYATKQMLNLAKECVNLKRFC  175 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~----------------~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v  175 (177)
                      +++.      +.+..+++++|+|||+||.....                +.+...+++|+.++.++++++++. ++++||
T Consensus        57 ~~d~------~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv  129 (253)
T 1xq6_A           57 ITDA------DSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-GVKHIV  129 (253)
T ss_dssp             TTSH------HHHHHHHTTCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-TCSEEE
T ss_pred             CCCH------HHHHHHHcCCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc-CCCEEE
Confidence            9998      78999999999999999975321                112246799999999999999998 888999


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      |+
T Consensus       130 ~~  131 (253)
T 1xq6_A          130 VV  131 (253)
T ss_dssp             EE
T ss_pred             EE
Confidence            84

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.66  E-value=3.1e-15  Score=115.00  Aligned_cols=121  Identities=17%  Similarity=0.138  Sum_probs=90.9

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   ++|++.+|+....  .+...+...             ...++.++.+|+
T Consensus        30 ~l~gk~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~--~~~~~~~~~-------------~~~~~~~~~~Dv   91 (275)
T 4imr_A           30 GLRGRTALVTGSSRGIGAAIAEGLAGAG---AHVILHGVKPGST--AAVQQRIIA-------------SGGTAQELAGDL   91 (275)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSTTTT--HHHHHHHHH-------------TTCCEEEEECCT
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEcCCHHHH--HHHHHHHHh-------------cCCeEEEEEecC
Confidence            4689999999999999999999999999   6899999976432  122222111             235789999999


Q ss_pred             CCCCCCCCHHHHHHHhc------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCcee
Q psy17489        113 ESEHLGLSEDSEQLIKS------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFCE  176 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~  176 (177)
                      ++.      +++..+++      ++|++|||||...       ..++|+..+++|+.++.++++++...   .+..++|+
T Consensus        92 ~~~------~~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~  165 (275)
T 4imr_A           92 SEA------GAGTDLIERAEAIAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVS  165 (275)
T ss_dssp             TST------THHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred             CCH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence            998      55555544      7899999999743       24678889999999999999987431   14457776


Q ss_pred             C
Q psy17489        177 L  177 (177)
Q Consensus       177 v  177 (177)
                      +
T Consensus       166 i  166 (275)
T 4imr_A          166 I  166 (275)
T ss_dssp             E
T ss_pred             E
Confidence            4

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.65  E-value=1.4e-15  Score=117.98  Aligned_cols=121  Identities=15%  Similarity=0.122  Sum_probs=91.0

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   ++|++++|+...  . +.+.+.+..           ....++.++.+|+
T Consensus        38 ~l~~k~vlVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~--~-~~~~~~l~~-----------~~~~~~~~~~~Dv  100 (293)
T 3rih_A           38 DLSARSVLVTGGTKGIGRGIATVFARAG---ANVAVAARSPRE--L-SSVTAELGE-----------LGAGNVIGVRLDV  100 (293)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSGGG--G-HHHHHHHTT-----------SSSSCEEEEECCT
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHH--H-HHHHHHHHh-----------hCCCcEEEEEEeC
Confidence            4678999999999999999999999999   689999987532  2 222221110           0114788999999


Q ss_pred             CCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCc
Q psy17489        113 ESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAK----ECVNLKRF  174 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~  174 (177)
                      ++.      +++..++       .++|++|||||...       ..+.|+..+++|+.++.++++++.    +. +..+|
T Consensus       101 ~d~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~i  173 (293)
T 3rih_A          101 SDP------GSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTAS-GRGRV  173 (293)
T ss_dssp             TCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH-SSCEE
T ss_pred             CCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEE
Confidence            998      5655554       37899999999753       246788899999999999999874    44 55677


Q ss_pred             eeC
Q psy17489        175 CEL  177 (177)
Q Consensus       175 v~v  177 (177)
                      |++
T Consensus       174 V~i  176 (293)
T 3rih_A          174 ILT  176 (293)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            764

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.65  E-value=1.5e-15  Score=115.49  Aligned_cols=109  Identities=16%  Similarity=0.238  Sum_probs=83.0

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   ++|++++|+.....  +...+                ...++.++.+|+
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~~--~~~~~----------------~~~~~~~~~~Dv   62 (257)
T 3tpc_A            4 QLKSRVFIVTGASSGLGAAVTRMLAQEG---ATVLGLDLKPPAGE--EPAAE----------------LGAAVRFRNADV   62 (257)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESSCC------------------------------CEEEECCT
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCChHHHH--HHHHH----------------hCCceEEEEccC
Confidence            3678999999999999999999999999   68999999764321  11111                124688999999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-----------chHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-----------FDEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-----------~~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                      ++.      +++..+++       ++|++|||||...           ..+.|+..+++|+.++.++++++...
T Consensus        63 ~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  130 (257)
T 3tpc_A           63 TNE------ADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEV  130 (257)
T ss_dssp             TCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            998      66666654       7999999999752           13678889999999999999988753

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.65  E-value=1.6e-15  Score=115.79  Aligned_cols=122  Identities=13%  Similarity=0.162  Sum_probs=90.5

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   ++|++.+|+..      .+.+....     +..   ....++.++.+|+
T Consensus         7 ~l~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~------~~~~~~~~-----l~~---~~~~~~~~~~~Dv   69 (262)
T 3pk0_A            7 DLQGRSVVVTGGTKGIGRGIATVFARAG---ANVAVAGRSTA------DIDACVAD-----LDQ---LGSGKVIGVQTDV   69 (262)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESCHH------HHHHHHHH-----HHT---TSSSCEEEEECCT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHH------HHHHHHHH-----HHh---hCCCcEEEEEcCC
Confidence            3678999999999999999999999999   68999998652      22221111     000   0114788999999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCce
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFC  175 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v  175 (177)
                      ++.      ++++.+++       ++|++|||||...       ..+.|+..+++|+.++.++++++.+.   .+..++|
T Consensus        70 ~~~------~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv  143 (262)
T 3pk0_A           70 SDR------AQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVV  143 (262)
T ss_dssp             TSH------HHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEE
T ss_pred             CCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence            998      66666554       7999999999753       24678889999999999998887653   1456777


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       144 ~i  145 (262)
T 3pk0_A          144 LT  145 (262)
T ss_dssp             EE
T ss_pred             EE
Confidence            63

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.65  E-value=1.6e-15  Score=115.47  Aligned_cols=119  Identities=20%  Similarity=0.234  Sum_probs=89.5

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|+..      .+.+....     +    .....++.++.+|++
T Consensus         7 l~~k~vlVTGas~giG~~ia~~l~~~G---~~V~~~~r~~~------~~~~~~~~-----~----~~~~~~~~~~~~D~~   68 (260)
T 2ae2_A            7 LEGCTALVTGGSRGIGYGIVEELASLG---ASVYTCSRNQK------ELNDCLTQ-----W----RSKGFKVEASVCDLS   68 (260)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCHH------HHHHHHHH-----H----HHTTCEEEEEECCTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHH------HHHHHHHH-----H----HhcCCcEEEEEcCCC
Confidence            578999999999999999999999999   68999988642      22211110     0    001246888999999


Q ss_pred             CCCCCCCHHHHHHHh--------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCc
Q psy17489        114 SEHLGLSEDSEQLIK--------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAK----ECVNLKRF  174 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~--------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~  174 (177)
                      +.      +++..++        .++|++|||||...       ..++|+..+++|+.++.++++++.    +. +..+|
T Consensus        69 ~~------~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~i  141 (260)
T 2ae2_A           69 SR------SERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKAS-ERGNV  141 (260)
T ss_dssp             CH------HHHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-SSEEE
T ss_pred             CH------HHHHHHHHHHHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEE
Confidence            98      6666655        57999999999743       246788899999999999999884    33 56788


Q ss_pred             eeC
Q psy17489        175 CEL  177 (177)
Q Consensus       175 v~v  177 (177)
                      |++
T Consensus       142 v~i  144 (260)
T 2ae2_A          142 VFI  144 (260)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            764

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.65  E-value=2.7e-15  Score=113.92  Aligned_cols=117  Identities=21%  Similarity=0.175  Sum_probs=89.1

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|+..    .+...++..             ...++.++.+|++
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G---~~V~~~~r~~~----~~~~~~l~~-------------~~~~~~~~~~D~~   61 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAG---ANIVLNGFGDP----APALAEIAR-------------HGVKAVHHPADLS   61 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEECSSCC----HHHHHHHHT-------------TSCCEEEECCCTT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCch----HHHHHHHHh-------------cCCceEEEeCCCC
Confidence            468999999999999999999999999   68999988764    122222111             1246888999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHH----HhcCCCCCce
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLA----KECVNLKRFC  175 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v  175 (177)
                      +.      +++..+++       ++|++|||||...       ..+.|+..+++|+.++.++.+.+    ++. +..+||
T Consensus        62 ~~------~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~g~iv  134 (255)
T 2q2v_A           62 DV------AQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRAR-NWGRII  134 (255)
T ss_dssp             SH------HHHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEE
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEE
Confidence            98      67777665       8999999999643       24678889999999888887765    444 567887


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       135 ~i  136 (255)
T 2q2v_A          135 NI  136 (255)
T ss_dssp             EE
T ss_pred             EE
Confidence            64

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.65  E-value=7.9e-16  Score=122.62  Aligned_cols=121  Identities=20%  Similarity=0.247  Sum_probs=89.6

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcc-cCCCeEEEeCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPD-FRSKIQVIPSNLESE  115 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~  115 (177)
                      |+|+||||+||||+++++.|++.|   ++|++++|+...... +.+.         .+..+... ...++.++.+|+.+.
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~-~~~~---------~l~~~~~~~~~~~~~~~~~Dl~d~   91 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKG---YEVHGIVRRSSSFNT-GRIE---------HLYKNPQAHIEGNMKLHYGDLTDS   91 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCCSSCCC-TTTG---------GGC---------CEEEEECCTTCH
T ss_pred             cEEEEECCCchHHHHHHHHHHHCC---CEEEEEECCccccch-hhHH---------HHhhhhccccCCCceEEEccCCCH
Confidence            689999999999999999999998   689999997542100 0000         00000000 124688999999997


Q ss_pred             CCCCCHHHHHHHhcC--CcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhcCCC---CCceeC
Q psy17489        116 HLGLSEDSEQLIKSK--VNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKECVNL---KRFCEL  177 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~--~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~~~~---~~~v~v  177 (177)
                            +.+..++++  +|+|||+||.....   .+++..+++|+.++.+++++|.+. ++   ++|||+
T Consensus        92 ------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~~~~iv~~  154 (375)
T 1t2a_A           92 ------TCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTC-GLINSVKFYQA  154 (375)
T ss_dssp             ------HHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-TCTTTCEEEEE
T ss_pred             ------HHHHHHHHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHh-CCCccceEEEe
Confidence                  778888874  79999999986542   456678999999999999999998 66   789874

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.65  E-value=2e-15  Score=114.78  Aligned_cols=121  Identities=15%  Similarity=0.214  Sum_probs=90.6

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   ++|++.+|+...  . +.+.+.+.            ....++.++.+|+
T Consensus         9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~--~-~~~~~~~~------------~~~~~~~~~~~Dv   70 (256)
T 3gaf_A            9 HLNDAVAIVTGAAAGIGRAIAGTFAKAG---ASVVVTDLKSEG--A-EAVAAAIR------------QAGGKAIGLECNV   70 (256)
T ss_dssp             CCTTCEEEECSCSSHHHHHHHHHHHHHT---CEEEEEESSHHH--H-HHHHHHHH------------HTTCCEEEEECCT
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHH------------hcCCcEEEEECCC
Confidence            4679999999999999999999999999   689999986521  1 12221111            1235789999999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCcee
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF------DEALQKAIRANLYATKQMLNLAKEC---VNLKRFCE  176 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~  176 (177)
                      ++.      +++..+++       ++|++|||||....      .++|+..+++|+.++.++++++...   .+..++|+
T Consensus        71 ~d~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~  144 (256)
T 3gaf_A           71 TDE------QHREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILN  144 (256)
T ss_dssp             TCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence            998      56666554       79999999997532      4678889999999999999987432   14457776


Q ss_pred             C
Q psy17489        177 L  177 (177)
Q Consensus       177 v  177 (177)
                      +
T Consensus       145 i  145 (256)
T 3gaf_A          145 I  145 (256)
T ss_dssp             E
T ss_pred             E
Confidence            4

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.65  E-value=2e-15  Score=115.04  Aligned_cols=116  Identities=13%  Similarity=0.096  Sum_probs=87.5

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|+.      +........            ...++.++.+|++
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~------~~~~~~~~~------------~~~~~~~~~~D~~   63 (260)
T 1nff_A            5 LTGKVALVSGGARGMGASHVRAMVAEG---AKVVFGDILD------EEGKAMAAE------------LADAARYVHLDVT   63 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHHH------------TGGGEEEEECCTT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCH------HHHHHHHHH------------hhcCceEEEecCC
Confidence            578999999999999999999999999   6899998864      222221111            0124788999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCce
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAK----ECVNLKRFC  175 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v  175 (177)
                      +.      +++..+++       ++|++|||||...       ..+.++..+++|+.++.++++.+.    +. +..+||
T Consensus        64 ~~------~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv  136 (260)
T 1nff_A           64 QP------AQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA-GRGSII  136 (260)
T ss_dssp             CH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEE
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEE
Confidence            98      66766665       7999999999753       246788899999999987776653    34 556787


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       137 ~i  138 (260)
T 1nff_A          137 NI  138 (260)
T ss_dssp             EE
T ss_pred             EE
Confidence            64

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.65  E-value=6.1e-15  Score=113.84  Aligned_cols=122  Identities=9%  Similarity=0.107  Sum_probs=92.4

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCC-----ChHHHHHHHHhhhhhhcccccCcccCCCeEEE
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGS-----SPEERVKNMLNSVIFDRLNKEVPDFRSKIQVI  108 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  108 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|+....     ..++.......             ...++.++
T Consensus         7 l~~k~vlVTGas~GIG~aia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~   70 (285)
T 3sc4_A            7 LRGKTMFISGGSRGIGLAIAKRVAADG---ANVALVAKSAEPHPKLPGTIYTAAKEIEE-------------AGGQALPI   70 (285)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHTTT---CEEEEEESCCSCCSSSCCCHHHHHHHHHH-------------HTSEEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECChhhhhhhhHHHHHHHHHHHh-------------cCCcEEEE
Confidence            678999999999999999999999999   6899999986421     12222222111             23578899


Q ss_pred             eCCCCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCC
Q psy17489        109 PSNLESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNL  171 (177)
Q Consensus       109 ~~D~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~  171 (177)
                      .+|+++.      +++..+++       ++|++|||||...       ..+.|+..+++|+.++.++++.+...   .+.
T Consensus        71 ~~Dv~~~------~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~  144 (285)
T 3sc4_A           71 VGDIRDG------DAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDN  144 (285)
T ss_dssp             ECCTTSH------HHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSS
T ss_pred             ECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Confidence            9999998      66666554       7999999999753       24678889999999999999988654   134


Q ss_pred             CCceeC
Q psy17489        172 KRFCEL  177 (177)
Q Consensus       172 ~~~v~v  177 (177)
                      .++|++
T Consensus       145 g~iv~i  150 (285)
T 3sc4_A          145 PHILTL  150 (285)
T ss_dssp             CEEEEC
T ss_pred             cEEEEE
Confidence            577764

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.65  E-value=2.3e-15  Score=115.34  Aligned_cols=124  Identities=13%  Similarity=0.075  Sum_probs=91.4

Q ss_pred             cccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489         31 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS  110 (177)
Q Consensus        31 ~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  110 (177)
                      +..+++|+++||||+|+||.++++.|++.|   ++|++.+++...  ..+.+.+...            ....++.++.+
T Consensus        13 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G---~~V~~~~~~~~~--~~~~~~~~~~------------~~~~~~~~~~~   75 (270)
T 3is3_A           13 PGRLDGKVALVTGSGRGIGAAVAVHLGRLG---AKVVVNYANSTK--DAEKVVSEIK------------ALGSDAIAIKA   75 (270)
T ss_dssp             TTCCTTCEEEESCTTSHHHHHHHHHHHHTT---CEEEEEESSCHH--HHHHHHHHHH------------HTTCCEEEEEC
T ss_pred             CCCcCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEcCCCHH--HHHHHHHHHH------------hcCCcEEEEEc
Confidence            345789999999999999999999999999   688887765421  1122222111            12357899999


Q ss_pred             CCCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc-CCCCCce
Q psy17489        111 NLESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC-VNLKRFC  175 (177)
Q Consensus       111 D~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v  175 (177)
                      |+++.      +++..+++       ++|++|||||...       ..++|+..+++|+.++.++++++... ..-.++|
T Consensus        76 Dv~~~------~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv  149 (270)
T 3is3_A           76 DIRQV------PEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIV  149 (270)
T ss_dssp             CTTSH------HHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEE
T ss_pred             CCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEE
Confidence            99998      66666554       7899999999753       24678889999999999999998775 1123676


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       150 ~i  151 (270)
T 3is3_A          150 LT  151 (270)
T ss_dssp             EE
T ss_pred             EE
Confidence            53

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.65  E-value=1e-15  Score=117.55  Aligned_cols=103  Identities=20%  Similarity=0.293  Sum_probs=84.9

Q ss_pred             ceEEEecCCcchHHHHHHHHHhh--CCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRS--FPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~--g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      |+|+||||+||||+++++.|++.  |   ++|++++|+....   ..+..                  .++.++.+|+.+
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g---~~V~~~~r~~~~~---~~l~~------------------~~~~~~~~D~~d   56 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPA---SQIIAIVRNVEKA---STLAD------------------QGVEVRHGDYNQ   56 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCG---GGEEEEESCTTTT---HHHHH------------------TTCEEEECCTTC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCC---CeEEEEEcCHHHH---hHHhh------------------cCCeEEEeccCC
Confidence            57999999999999999999998  7   6899999975321   11111                  467899999999


Q ss_pred             CCCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        115 EHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      .      +.+..+++++|+|||+|+... . .     ++|+.++.+++++|++. +++||||+
T Consensus        57 ~------~~l~~~~~~~d~vi~~a~~~~-~-~-----~~n~~~~~~l~~a~~~~-~~~~~v~~  105 (287)
T 2jl1_A           57 P------ESLQKAFAGVSKLLFISGPHY-D-N-----TLLIVQHANVVKAARDA-GVKHIAYT  105 (287)
T ss_dssp             H------HHHHHHTTTCSEEEECCCCCS-C-H-----HHHHHHHHHHHHHHHHT-TCSEEEEE
T ss_pred             H------HHHHHHHhcCCEEEEcCCCCc-C-c-----hHHHHHHHHHHHHHHHc-CCCEEEEE
Confidence            8      789999999999999999632 1 1     67999999999999998 89999984

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.65  E-value=5.4e-16  Score=120.90  Aligned_cols=98  Identities=12%  Similarity=0.211  Sum_probs=82.2

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      .+|+|+||||+||||+++++.|++.|   .+|++++|+.                                   .+|+.+
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g---~~v~~~~r~~-----------------------------------~~D~~d   43 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRG---DVELVLRTRD-----------------------------------ELNLLD   43 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCT---TEEEECCCTT-----------------------------------TCCTTC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCC---CeEEEEecCc-----------------------------------cCCccC
Confidence            35799999999999999999999998   4788776532                                   258887


Q ss_pred             CCCCCCHHHHHHHhc--CCcEEEEcCcccCc----hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        115 EHLGLSEDSEQLIKS--KVNIIFHCAASLRF----DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~--~~d~vi~~aa~~~~----~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      .      +.+..+++  ++|+|||+|+....    ..++..++++|+.++.+++++|++. ++++|||+
T Consensus        44 ~------~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~  105 (321)
T 1e6u_A           44 S------RAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQN-DVNKLLFL  105 (321)
T ss_dssp             H------HHHHHHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEE
T ss_pred             H------HHHHHHHHhcCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEE
Confidence            6      77888888  89999999998652    3456678999999999999999998 88999984

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.65  E-value=2.3e-15  Score=114.14  Aligned_cols=120  Identities=16%  Similarity=0.155  Sum_probs=89.0

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|+...  . +.+.+.+..            ...++.++.+|++
T Consensus        11 l~~k~vlItGasggiG~~la~~l~~~G---~~V~~~~r~~~~--~-~~~~~~l~~------------~~~~~~~~~~D~~   72 (260)
T 3awd_A           11 LDNRVAIVTGGAQNIGLACVTALAEAG---ARVIIADLDEAM--A-TKAVEDLRM------------EGHDVSSVVMDVT   72 (260)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH--H-HHHHHHHHH------------TTCCEEEEECCTT
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHHh------------cCCceEEEEecCC
Confidence            578999999999999999999999999   689999986421  1 111111110            1257889999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCce
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFC  175 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v  175 (177)
                      +.      +++..+++       ++|+|||+||...        ..+.++..+++|+.++.++++.+.+.   .+..+||
T Consensus        73 ~~------~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv  146 (260)
T 3awd_A           73 NT------ESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIV  146 (260)
T ss_dssp             CH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEE
Confidence            98      66666654       7899999999643        23567788999999999999887642   1456776


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       147 ~~  148 (260)
T 3awd_A          147 AI  148 (260)
T ss_dssp             EE
T ss_pred             EE
Confidence            53

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.65  E-value=6.1e-16  Score=122.86  Aligned_cols=122  Identities=19%  Similarity=0.192  Sum_probs=87.1

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      ||+++||||+||||+++++.|++.|   ++|++++|+..... .+.+......         ......++.++.+|+++.
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~-~~~~~~~~~~---------~~~~~~~~~~~~~Dl~d~   67 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKG---YEVHGIKRRASSFN-TERVDHIYQD---------PHTCNPKFHLHYGDLSDT   67 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEECC-------------------------------CCEEECCCCSSCH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCC---CEEEEEECCCcccc-hHHHHHHhhc---------cccCCCceEEEECCCCCH
Confidence            4789999999999999999999998   68999998753210 0111111000         000124688999999997


Q ss_pred             CCCCCHHHHHHHhcC--CcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhcCCC---CCceeC
Q psy17489        116 HLGLSEDSEQLIKSK--VNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKECVNL---KRFCEL  177 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~--~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~---~~~v~v  177 (177)
                            +.+..++++  +|+|||+||....   ..++...+++|+.++.+++++|.+. ++   ++|||+
T Consensus        68 ------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~iv~~  130 (372)
T 1db3_A           68 ------SNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFL-GLEKKTRFYQA  130 (372)
T ss_dssp             ------HHHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHT-TCTTTCEEEEE
T ss_pred             ------HHHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh-CCCCCcEEEEe
Confidence                  778888774  7999999997543   2456678899999999999999998 76   789874

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.65  E-value=9.1e-16  Score=116.90  Aligned_cols=120  Identities=14%  Similarity=0.175  Sum_probs=89.2

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHh-hCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLR-SFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~-~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .++|+++||||+|+||.++++.|++ .|   ++|++++|+...  . +...+.+..            ...++.++.+|+
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g---~~V~~~~r~~~~--~-~~~~~~l~~------------~~~~~~~~~~Dl   63 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFS---GDVVLTARDVTR--G-QAAVQQLQA------------EGLSPRFHQLDI   63 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSS---SEEEEEESSHHH--H-HHHHHHHHH------------TTCCCEEEECCT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcC---CeEEEEeCChHH--H-HHHHHHHHh------------cCCeeEEEECCC
Confidence            4678999999999999999999999 88   689999986421  1 111111110            124688999999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhcC-CCCCceeC
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKECV-NLKRFCEL  177 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~~~v~v  177 (177)
                      ++.      +++..+++       ++|+||||||....       .+.++..+++|+.++.++++.+.+.- +..+||++
T Consensus        64 ~~~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~  137 (276)
T 1wma_A           64 DDL------QSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNV  137 (276)
T ss_dssp             TCH------HHHHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred             CCH------HHHHHHHHHHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEE
Confidence            997      66666655       79999999997531       36778899999999999999998751 12377764

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.64  E-value=2.1e-15  Score=114.88  Aligned_cols=119  Identities=17%  Similarity=0.224  Sum_probs=88.8

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|+..      .+.+....     +    .....++.++.+|++
T Consensus        12 l~~k~vlITGasggiG~~la~~l~~~G---~~V~~~~r~~~------~~~~~~~~-----~----~~~~~~~~~~~~D~~   73 (266)
T 1xq1_A           12 LKAKTVLVTGGTKGIGHAIVEEFAGFG---AVIHTCARNEY------ELNECLSK-----W----QKKGFQVTGSVCDAS   73 (266)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHH------HHHHHHHH-----H----HHTTCCEEEEECCTT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHH------HHHHHHHH-----H----HhcCCeeEEEECCCC
Confidence            578999999999999999999999999   58999988642      22221110     0    001246888999999


Q ss_pred             CCCCCCCHHHHHHHh--------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHH----HhcCCCCCc
Q psy17489        114 SEHLGLSEDSEQLIK--------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLA----KECVNLKRF  174 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~--------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~  174 (177)
                      +.      +++..++        .++|+|||+||...       ..+.++..+++|+.++.++++++    ++. +.++|
T Consensus        74 ~~------~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~i  146 (266)
T 1xq1_A           74 LR------PEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKAS-GCGNI  146 (266)
T ss_dssp             SH------HHHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-SSCEE
T ss_pred             CH------HHHHHHHHHHHHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEE
Confidence            97      5666655        57899999999743       24577888999999999999988    344 66788


Q ss_pred             eeC
Q psy17489        175 CEL  177 (177)
Q Consensus       175 v~v  177 (177)
                      |++
T Consensus       147 v~i  149 (266)
T 1xq1_A          147 IFM  149 (266)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            874

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.64  E-value=2e-15  Score=114.29  Aligned_cols=118  Identities=18%  Similarity=0.184  Sum_probs=89.6

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   ++|++.+|+.      +...+....            ...++.++.+|+
T Consensus         3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G---~~V~~~~r~~------~~~~~~~~~------------~~~~~~~~~~Dv   61 (247)
T 3rwb_A            3 RLAGKTALVTGAAQGIGKAIAARLAADG---ATVIVSDINA------EGAKAAAAS------------IGKKARAIAADI   61 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEECSCH------HHHHHHHHH------------HCTTEEECCCCT
T ss_pred             CcCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCH------HHHHHHHHH------------hCCceEEEEcCC
Confidence            4678999999999999999999999999   6899988864      222222211            125788999999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHH----HhcCCCCCc
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLA----KECVNLKRF  174 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~  174 (177)
                      ++.      ++++.+++       ++|++|||||...       ..+.|+..+++|+.++.++++++    ++.+...++
T Consensus        62 ~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~i  135 (247)
T 3rwb_A           62 SDP------GSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRV  135 (247)
T ss_dssp             TCH------HHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred             CCH------HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEE
Confidence            998      66666554       7999999999753       24678889999999999998884    333224577


Q ss_pred             eeC
Q psy17489        175 CEL  177 (177)
Q Consensus       175 v~v  177 (177)
                      |++
T Consensus       136 v~i  138 (247)
T 3rwb_A          136 ISI  138 (247)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            653

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.64  E-value=3.2e-15  Score=117.59  Aligned_cols=124  Identities=17%  Similarity=0.247  Sum_probs=90.8

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +.+|+++||||+|+||.++++.|++.|   ++|++.+|+...... +.+..+...         ......++.++.+|++
T Consensus         3 m~~k~vlVTGas~GIG~aia~~L~~~G---~~V~~~~r~~~~r~~-~~~~~l~~~---------~~~~~~~~~~~~~Dvt   69 (324)
T 3u9l_A            3 MSKKIILITGASSGFGRLTAEALAGAG---HRVYASMRDIVGRNA-SNVEAIAGF---------ARDNDVDLRTLELDVQ   69 (324)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESCTTTTTH-HHHHHHHHH---------HHHHTCCEEEEECCTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEecCcccccCH-HHHHHHHHH---------HHhcCCcEEEEEeecC
Confidence            457899999999999999999999999   689999987433222 222222110         0012357899999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHH----HhcCCCCCce
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLA----KECVNLKRFC  175 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v  175 (177)
                      +.      +++..+++       ++|++|||||...       ..++++..+++|+.++.++++++    ++. +..++|
T Consensus        70 d~------~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~-~~g~iV  142 (324)
T 3u9l_A           70 SQ------VSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQ-KHGLLI  142 (324)
T ss_dssp             CH------HHHHHHHHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEE
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEE
Confidence            98      66766655       7999999999643       24677888999999999999988    444 556777


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       143 ~i  144 (324)
T 3u9l_A          143 WI  144 (324)
T ss_dssp             EE
T ss_pred             EE
Confidence            53

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.64  E-value=3.1e-15  Score=115.20  Aligned_cols=127  Identities=13%  Similarity=0.077  Sum_probs=92.9

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCC------hHHHHHHHHhhhhhhcccccCcccCCCeE
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSS------PEERVKNMLNSVIFDRLNKEVPDFRSKIQ  106 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  106 (177)
                      .+++|+++||||+|+||.++++.|++.|   ++|++++|+.....      ..+.+.+....         ......++.
T Consensus         7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~   74 (287)
T 3pxx_A            7 RVQDKVVLVTGGARGQGRSHAVKLAEEG---ADIILFDICHDIETNEYPLATSRDLEEAGLE---------VEKTGRKAY   74 (287)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSCCTTSCSCCCCHHHHHHHHHH---------HHHTTSCEE
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCC---CeEEEEcccccccccccchhhhHHHHHHHHH---------HHhcCCceE
Confidence            4678999999999999999999999999   68999998732211      11222222111         011235789


Q ss_pred             EEeCCCCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-----hHHHHHHHHHhHHHHHHHHHHHHhc-CCCCC
Q psy17489        107 VIPSNLESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-----DEALQKAIRANLYATKQMLNLAKEC-VNLKR  173 (177)
Q Consensus       107 ~~~~D~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-----~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~  173 (177)
                      ++.+|+++.      +++..+++       ++|++|||||....     .+.|+..+++|+.++.++++++... .+..+
T Consensus        75 ~~~~D~~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~  148 (287)
T 3pxx_A           75 TAEVDVRDR------AAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGAS  148 (287)
T ss_dssp             EEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCE
T ss_pred             EEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcE
Confidence            999999998      66666554       79999999997542     4678889999999999999999764 12346


Q ss_pred             ceeC
Q psy17489        174 FCEL  177 (177)
Q Consensus       174 ~v~v  177 (177)
                      +|++
T Consensus       149 iv~i  152 (287)
T 3pxx_A          149 IITT  152 (287)
T ss_dssp             EEEE
T ss_pred             EEEe
Confidence            6653

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.64  E-value=2.6e-15  Score=115.87  Aligned_cols=119  Identities=14%  Similarity=0.091  Sum_probs=89.4

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +.+|+++||||+|+||.++++.|++.|   ++|++++|+.      +.+.+....         ......++.++.+|++
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~------~~~~~~~~~---------l~~~~~~~~~~~~Dv~   87 (283)
T 3v8b_A           26 QPSPVALITGAGSGIGRATALALAADG---VTVGALGRTR------TEVEEVADE---------IVGAGGQAIALEADVS   87 (283)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESSH------HHHHHHHHH---------HTTTTCCEEEEECCTT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCH------HHHHHHHHH---------HHhcCCcEEEEEccCC
Confidence            568999999999999999999999999   6899999865      222222111         1112357889999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHH----HhcCCCCCc
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLA----KECVNLKRF  174 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~  174 (177)
                      +.      +++..+++       ++|++|||||...        ..+.|+..+++|+.++.++++++    ++. +..++
T Consensus        88 d~------~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~I  160 (283)
T 3v8b_A           88 DE------LQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQR-GGGAI  160 (283)
T ss_dssp             CH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEE
T ss_pred             CH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCceE
Confidence            98      56666554       7999999999742        14678889999999999999987    444 45677


Q ss_pred             eeC
Q psy17489        175 CEL  177 (177)
Q Consensus       175 v~v  177 (177)
                      |++
T Consensus       161 v~i  163 (283)
T 3v8b_A          161 VVV  163 (283)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            764

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.64  E-value=3.2e-15  Score=112.39  Aligned_cols=117  Identities=16%  Similarity=0.177  Sum_probs=89.2

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||+++++.|++.|   ++|++++|+.      +.+.+....             ..++.++.+|+
T Consensus         4 ~~~~~~vlVTGasggiG~~~a~~l~~~G---~~V~~~~r~~------~~~~~~~~~-------------~~~~~~~~~D~   61 (244)
T 1cyd_A            4 NFSGLRALVTGAGKGIGRDTVKALHASG---AKVVAVTRTN------SDLVSLAKE-------------CPGIEPVCVDL   61 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHHH-------------STTCEEEECCT
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCH------HHHHHHHHh-------------ccCCCcEEecC
Confidence            3578999999999999999999999999   5899998864      222222110             13567789999


Q ss_pred             CCCCCCCCHHHHHHHhc---CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CC-CCCceeC
Q psy17489        113 ESEHLGLSEDSEQLIKS---KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VN-LKRFCEL  177 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~---~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~-~~~~v~v  177 (177)
                      ++.      +++..+++   ++|+|||+||...       ..+.++..+++|+.++.++++.+.+.   .+ .++||++
T Consensus        62 ~~~------~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~  134 (244)
T 1cyd_A           62 GDW------DATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNV  134 (244)
T ss_dssp             TCH------HHHHHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred             CCH------HHHHHHHHHcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEE
Confidence            998      77888775   5899999999643       13567889999999999998887653   13 5678764

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.64  E-value=2.9e-15  Score=114.82  Aligned_cols=122  Identities=14%  Similarity=0.163  Sum_probs=90.3

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   ++|++.+|+...  ..+.+.+....            ...++.++.+|+
T Consensus        25 ~l~~k~vlVTGas~gIG~aia~~la~~G---~~V~~~~~~~~~--~~~~~~~~~~~------------~~~~~~~~~~D~   87 (269)
T 4dmm_A           25 PLTDRIALVTGASRGIGRAIALELAAAG---AKVAVNYASSAG--AADEVVAAIAA------------AGGEAFAVKADV   87 (269)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHH--HHHHHHHHHHH------------TTCCEEEEECCT
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCChH--HHHHHHHHHHh------------cCCcEEEEECCC
Confidence            3678999999999999999999999999   688888875321  11222222111            235788999999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCce
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFC  175 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v  175 (177)
                      ++.      +++..+++       ++|++|||||...       ..++|+..+++|+.++.++++++...   .+..+||
T Consensus        88 ~d~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv  161 (269)
T 4dmm_A           88 SQE------SEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRII  161 (269)
T ss_dssp             TSH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred             CCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEE
Confidence            998      66666554       7899999999753       24678889999999999999987432   1455777


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       162 ~i  163 (269)
T 4dmm_A          162 NI  163 (269)
T ss_dssp             EE
T ss_pred             EE
Confidence            64

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.64  E-value=3.5e-15  Score=113.67  Aligned_cols=121  Identities=11%  Similarity=0.099  Sum_probs=89.3

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|+...  . +.+.+.+..           ....++.++.+|++
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~--~-~~~~~~l~~-----------~~~~~~~~~~~D~~   67 (263)
T 3ai3_A            5 ISGKVAVITGSSSGIGLAIAEGFAKEG---AHIVLVARQVDR--L-HEAARSLKE-----------KFGVRVLEVAVDVA   67 (263)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCHHH--H-HHHHHHHHH-----------HHCCCEEEEECCTT
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEcCCHHH--H-HHHHHHHHH-----------hcCCceEEEEcCCC
Confidence            578999999999999999999999999   689999986421  1 111111110           00246889999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCcee
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFCE  176 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~  176 (177)
                      +.      +++..+++       ++|++|||||...       ..+.|+..+++|+.++.++++.+...   .+..+||+
T Consensus        68 ~~------~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~  141 (263)
T 3ai3_A           68 TP------EGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIH  141 (263)
T ss_dssp             SH------HHHHHHHHHHHHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEE
Confidence            98      66666654       7999999999753       24678889999999999998887531   15567776


Q ss_pred             C
Q psy17489        177 L  177 (177)
Q Consensus       177 v  177 (177)
                      +
T Consensus       142 i  142 (263)
T 3ai3_A          142 N  142 (263)
T ss_dssp             E
T ss_pred             E
Confidence            4

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.64  E-value=1.2e-15  Score=117.13  Aligned_cols=119  Identities=13%  Similarity=0.133  Sum_probs=88.7

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   ++|++++|.+.   ..+...+. .            ....++.++.+|+
T Consensus        28 ~l~gk~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~---~~~~~~~~-~------------~~~~~~~~~~~Dv   88 (273)
T 3uf0_A           28 SLAGRTAVVTGAGSGIGRAIAHGYARAG---AHVLAWGRTDG---VKEVADEI-A------------DGGGSAEAVVADL   88 (273)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSTH---HHHHHHHH-H------------TTTCEEEEEECCT
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEcCHHH---HHHHHHHH-H------------hcCCcEEEEEecC
Confidence            4679999999999999999999999999   68888886531   11222221 1            1235788999999


Q ss_pred             CCCCCCCCHHHHHHHh------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCce
Q psy17489        113 ESEHLGLSEDSEQLIK------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAK----ECVNLKRFC  175 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v  175 (177)
                      ++.      +++..+.      .++|++|||||...       ..+.|+..+++|+.++.++++++.    +. +..+||
T Consensus        89 ~d~------~~v~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~IV  161 (273)
T 3uf0_A           89 ADL------EGAANVAEELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAH-GSGRIV  161 (273)
T ss_dssp             TCH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEE
T ss_pred             CCH------HHHHHHHHHHHhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEE
Confidence            998      5555443      37999999999753       246788899999999999999874    33 456777


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       162 ~i  163 (273)
T 3uf0_A          162 TI  163 (273)
T ss_dssp             EE
T ss_pred             EE
Confidence            64

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.64  E-value=2.8e-15  Score=115.57  Aligned_cols=124  Identities=13%  Similarity=0.075  Sum_probs=90.0

Q ss_pred             cccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489         31 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS  110 (177)
Q Consensus        31 ~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  110 (177)
                      ...+.+|+++||||+|+||.++++.|++.|   ++|++.+|+...  ..+.+.+....           ....++.++.+
T Consensus        20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~G---~~V~~~~r~~~~--~~~~~~~~~~~-----------~~~~~~~~~~~   83 (281)
T 3v2h_A           20 FQSMMTKTAVITGSTSGIGLAIARTLAKAG---ANIVLNGFGAPD--EIRTVTDEVAG-----------LSSGTVLHHPA   83 (281)
T ss_dssp             --CCTTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEECCCCHH--HHHHHHHHHHT-----------TCSSCEEEECC
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCChH--HHHHHHHHHhh-----------ccCCcEEEEeC
Confidence            344678999999999999999999999999   689998885311  11111111110           01357889999


Q ss_pred             CCCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHH----hcCCCC
Q psy17489        111 NLESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAK----ECVNLK  172 (177)
Q Consensus       111 D~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~  172 (177)
                      |+++.      +++..+++       ++|++|||||...       ..+.|+..+++|+.++.++++++.    +. +..
T Consensus        84 Dv~d~------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g  156 (281)
T 3v2h_A           84 DMTKP------SEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKK-GWG  156 (281)
T ss_dssp             CTTCH------HHHHHHHHHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCE
T ss_pred             CCCCH------HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCC
Confidence            99998      66666554       7899999999753       246788899999999999999873    33 455


Q ss_pred             CceeC
Q psy17489        173 RFCEL  177 (177)
Q Consensus       173 ~~v~v  177 (177)
                      +||++
T Consensus       157 ~iv~i  161 (281)
T 3v2h_A          157 RIINI  161 (281)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            67764

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.64  E-value=3.1e-15  Score=113.78  Aligned_cols=108  Identities=20%  Similarity=0.294  Sum_probs=85.4

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|+...  ..+...+ +               ..++.++.+|++
T Consensus        10 ~~~k~vlVTGasggiG~~~a~~l~~~G---~~V~~~~r~~~~--~~~~~~~-~---------------~~~~~~~~~D~~   68 (265)
T 2o23_A           10 VKGLVAVITGGASGLGLATAERLVGQG---ASAVLLDLPNSG--GEAQAKK-L---------------GNNCVFAPADVT   68 (265)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECTTSS--HHHHHHH-H---------------CTTEEEEECCTT
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCcHh--HHHHHHH-h---------------CCceEEEEcCCC
Confidence            578999999999999999999999999   689999997632  2221111 1               246889999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------------chHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------------FDEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------------~~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                      +.      +++..+++       ++|+||||||...             ..+.++..+++|+.++.++++.+.+.
T Consensus        69 ~~------~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~  137 (265)
T 2o23_A           69 SE------KDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGE  137 (265)
T ss_dssp             CH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CH------HHHHHHHHHHHHHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            98      66766665       7999999999742             23567889999999999999988653

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.64  E-value=2.2e-15  Score=114.15  Aligned_cols=117  Identities=15%  Similarity=0.153  Sum_probs=88.8

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++.+|+..      ...+....            ...+..++.+|++
T Consensus         7 l~gk~~lVTGas~gIG~a~a~~l~~~G---~~V~~~~r~~~------~~~~~~~~------------~~~~~~~~~~Dv~   65 (248)
T 3op4_A            7 LEGKVALVTGASRGIGKAIAELLAERG---AKVIGTATSES------GAQAISDY------------LGDNGKGMALNVT   65 (248)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESSHH------HHHHHHHH------------HGGGEEEEECCTT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCHH------HHHHHHHH------------hcccceEEEEeCC
Confidence            578999999999999999999999999   68999988642      22221111            0134678999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCcee
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFCE  176 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~  176 (177)
                      +.      ++++.+++       ++|++|||||...       ..++|+..+++|+.++.++++++...   .+..++|+
T Consensus        66 d~------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~  139 (248)
T 3op4_A           66 NP------ESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIIN  139 (248)
T ss_dssp             CH------HHHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEE
Confidence            98      66666554       7999999999753       24678889999999999999987541   14457776


Q ss_pred             C
Q psy17489        177 L  177 (177)
Q Consensus       177 v  177 (177)
                      +
T Consensus       140 i  140 (248)
T 3op4_A          140 V  140 (248)
T ss_dssp             E
T ss_pred             E
Confidence            4

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.64  E-value=5.7e-15  Score=111.79  Aligned_cols=117  Identities=14%  Similarity=0.187  Sum_probs=88.1

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|++.     +.+.+....            ...++.++.+|++
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~-----~~~~~~~~~------------~~~~~~~~~~Dv~   64 (249)
T 2ew8_A            5 LKDKLAVITGGANGIGRAIAERFAVEG---ADIAIADLVPA-----PEAEAAIRN------------LGRRVLTVKCDVS   64 (249)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCC-----HHHHHHHHH------------TTCCEEEEECCTT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEcCCch-----hHHHHHHHh------------cCCcEEEEEeecC
Confidence            578999999999999999999999999   68999998752     111111110            1246889999999


Q ss_pred             CCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHH----HhcCCCCCce
Q psy17489        114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLA----KECVNLKRFC  175 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v  175 (177)
                      +.      +++..++       .++|++|||||...       ..+.|+..+++|+.++.++++.+    ++. +..+||
T Consensus        65 ~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv  137 (249)
T 2ew8_A           65 QP------GDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN-GWGRII  137 (249)
T ss_dssp             CH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEE
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCeEEE
Confidence            98      5666553       47999999999753       24678889999999999888874    344 556777


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       138 ~i  139 (249)
T 2ew8_A          138 NL  139 (249)
T ss_dssp             EE
T ss_pred             EE
Confidence            64

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.64  E-value=1.2e-15  Score=116.80  Aligned_cols=115  Identities=10%  Similarity=0.114  Sum_probs=87.3

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      ..+.+|+++||||+|+||.++++.|++.|   ++|++++|+.      +++...               ...++.++.+|
T Consensus        12 ~~~~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~------~~~~~~---------------~~~~~~~~~~D   67 (266)
T 3p19_A           12 RGSMKKLVVITGASSGIGEAIARRFSEEG---HPLLLLARRV------ERLKAL---------------NLPNTLCAQVD   67 (266)
T ss_dssp             ---CCCEEEEESTTSHHHHHHHHHHHHTT---CCEEEEESCH------HHHHTT---------------CCTTEEEEECC
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCH------HHHHHh---------------hcCCceEEEec
Confidence            34678999999999999999999999999   5899998864      222211               11368899999


Q ss_pred             CCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHH----hcCCCCC
Q psy17489        112 LESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAK----ECVNLKR  173 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~  173 (177)
                      +++.      +++..+++       ++|++|||||...       ..+.|+..+++|+.++.++++.+.    +. +..+
T Consensus        68 v~d~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~  140 (266)
T 3p19_A           68 VTDK------YTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKAR-NCGT  140 (266)
T ss_dssp             TTCH------HHHHHHHHHHHHHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCE
T ss_pred             CCCH------HHHHHHHHHHHHHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcE
Confidence            9998      56666554       7899999999753       246788899999999999877764    33 5567


Q ss_pred             ceeC
Q psy17489        174 FCEL  177 (177)
Q Consensus       174 ~v~v  177 (177)
                      ||++
T Consensus       141 IV~i  144 (266)
T 3p19_A          141 IINI  144 (266)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            7764

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.64  E-value=3e-15  Score=113.31  Aligned_cols=120  Identities=14%  Similarity=0.127  Sum_probs=88.2

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   .+|++++|+...  . +.+.+.+.            ....++.++.+|+
T Consensus         6 ~~~~k~vlITGas~giG~~~a~~l~~~G---~~V~~~~r~~~~--~-~~~~~~~~------------~~~~~~~~~~~D~   67 (253)
T 3qiv_A            6 RFENKVGIVTGSGGGIGQAYAEALAREG---AAVVVADINAEA--A-EAVAKQIV------------ADGGTAISVAVDV   67 (253)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH--H-HHHHHHHH------------HTTCEEEEEECCT
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEcCCHHH--H-HHHHHHHH------------hcCCcEEEEEccC
Confidence            3578999999999999999999999999   689999886421  1 11211111            1235788999999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC----------chHHHHHHHHHhHHHHHHHHHHHH----hcCCC
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR----------FDEALQKAIRANLYATKQMLNLAK----ECVNL  171 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~----------~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~  171 (177)
                      ++.      +++..+++       ++|++|||||...          ..+.++..+++|+.++.++.+.+.    +. +.
T Consensus        68 ~~~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~  140 (253)
T 3qiv_A           68 SDP------ESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKR-GG  140 (253)
T ss_dssp             TSH------HHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TC
T ss_pred             CCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CC
Confidence            998      66666654       7999999999731          246678899999999888777653    33 45


Q ss_pred             CCceeC
Q psy17489        172 KRFCEL  177 (177)
Q Consensus       172 ~~~v~v  177 (177)
                      .+||++
T Consensus       141 g~iv~i  146 (253)
T 3qiv_A          141 GAIVNQ  146 (253)
T ss_dssp             EEEEEE
T ss_pred             CEEEEE
Confidence            567763

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.64  E-value=9.1e-16  Score=119.37  Aligned_cols=109  Identities=23%  Similarity=0.340  Sum_probs=83.5

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +|+|+||||+||||+++++.|++.|    .++++.+......                     ......+.++.+|+.+.
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g----~~v~~~~~~~~~~---------------------~~~~~~~~~~~~Dl~~~   55 (313)
T 3ehe_A            1 MSLIVVTGGAGFIGSHVVDKLSESN----EIVVIDNLSSGNE---------------------EFVNEAARLVKADLAAD   55 (313)
T ss_dssp             --CEEEETTTSHHHHHHHHHHTTTS----CEEEECCCSSCCG---------------------GGSCTTEEEECCCTTTS
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCC----CEEEEEcCCCCCh---------------------hhcCCCcEEEECcCChH
Confidence            3689999999999999999999997    3444444332210                     00125688999999984


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                             .+..+++++|+|||+|+....   ..+++..+++|+.++.++++++++. ++++|||+
T Consensus        56 -------~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~iv~~  112 (313)
T 3ehe_A           56 -------DIKDYLKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKA-GVSRIVFT  112 (313)
T ss_dssp             -------CCHHHHTTCSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEE
T ss_pred             -------HHHHHhcCCCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEe
Confidence                   466777899999999996432   3567788999999999999999998 88899985

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.64  E-value=7e-15  Score=116.65  Aligned_cols=124  Identities=11%  Similarity=0.109  Sum_probs=93.0

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCC-----hHHHHHHHHhhhhhhcccccCcccCCCeE
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSS-----PEERVKNMLNSVIFDRLNKEVPDFRSKIQ  106 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  106 (177)
                      ..+++|+++||||+|+||.++++.|++.|   .+|++++|+.....     ..+...+. .            ....++.
T Consensus        41 ~~l~gk~vlVTGas~GIG~aia~~La~~G---a~Vvl~~r~~~~~~~l~~~l~~~~~~~-~------------~~g~~~~  104 (346)
T 3kvo_A           41 GRLAGCTVFITGASRGIGKAIALKAAKDG---ANIVIAAKTAQPHPKLLGTIYTAAEEI-E------------AVGGKAL  104 (346)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHTTT---CEEEEEESCCSCCSSSCCCHHHHHHHH-H------------HTTCEEE
T ss_pred             CCCCCCEEEEeCCChHHHHHHHHHHHHCC---CEEEEEECChhhhhhhHHHHHHHHHHH-H------------hcCCeEE
Confidence            45789999999999999999999999999   68999999864321     11212211 1            1235788


Q ss_pred             EEeCCCCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---C
Q psy17489        107 VIPSNLESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---V  169 (177)
Q Consensus       107 ~~~~D~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~  169 (177)
                      ++.+|+++.      +++..+++       ++|+||||||...       ..+.|+..+++|+.++.++++++...   .
T Consensus       105 ~~~~Dv~d~------~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~  178 (346)
T 3kvo_A          105 PCIVDVRDE------QQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKS  178 (346)
T ss_dssp             EEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTC
T ss_pred             EEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC
Confidence            999999998      66666554       7999999999743       24678889999999999999988542   1


Q ss_pred             CCCCceeC
Q psy17489        170 NLKRFCEL  177 (177)
Q Consensus       170 ~~~~~v~v  177 (177)
                      +..+||++
T Consensus       179 ~~g~IV~i  186 (346)
T 3kvo_A          179 KVAHILNI  186 (346)
T ss_dssp             SSCEEEEE
T ss_pred             CCCEEEEE
Confidence            45677764

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.64  E-value=2.3e-16  Score=122.10  Aligned_cols=102  Identities=19%  Similarity=0.187  Sum_probs=82.0

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+|+||||+||||+++++.|++.|+         +...                          ....+.++.+|+.
T Consensus         4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~---------~~~~--------------------------~~~~~~~~~~D~~   48 (319)
T 4b8w_A            4 FQSMRILVTGGSGLVGKAIQKVVADGAG---------LPGE--------------------------DWVFVSSKDADLT   48 (319)
T ss_dssp             CCCCEEEEETCSSHHHHHHHHHHHTTTC---------CTTC--------------------------EEEECCTTTCCTT
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhcCC---------cccc--------------------------cccccCceecccC
Confidence            5688999999999999999999999983         1110                          0123445578999


Q ss_pred             CCCCCCCHHHHHHHhcC--CcEEEEcCcccCc----hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        114 SEHLGLSEDSEQLIKSK--VNIIFHCAASLRF----DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~~--~d~vi~~aa~~~~----~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      +.      +.+..++++  +|+|||+|+....    ..++..++++|+.++.+++++|++. +++||||+
T Consensus        49 d~------~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~v~~  111 (319)
T 4b8w_A           49 DT------AQTRALFEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEV-GARKVVSC  111 (319)
T ss_dssp             SH------HHHHHHHHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEE
T ss_pred             CH------HHHHHHHhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEE
Confidence            87      788888876  9999999998642    2455678999999999999999998 89999984

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.64  E-value=2.9e-15  Score=115.01  Aligned_cols=127  Identities=14%  Similarity=0.110  Sum_probs=92.3

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCC------ChHHHHHHHHhhhhhhcccccCcccCCCeE
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGS------SPEERVKNMLNSVIFDRLNKEVPDFRSKIQ  106 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  106 (177)
                      .+++|+++||||+|+||.++++.|++.|   ++|++++|++...      ...+.+......         ......++.
T Consensus        10 ~l~gk~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~   77 (278)
T 3sx2_A           10 PLTGKVAFITGAARGQGRAHAVRLAADG---ADIIAVDLCDQIASVPYPLATPEELAATVKL---------VEDIGSRIV   77 (278)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEECCSCCTTCSSCCCCHHHHHHHHHH---------HHHHTCCEE
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCC---CeEEEEecccccccccccccchHHHHHHHHH---------HHhcCCeEE
Confidence            4679999999999999999999999999   6899999873211      112233222211         011235789


Q ss_pred             EEeCCCCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC---chHHHHHHHHHhHHHHHHHHHHHHhc----CCCC
Q psy17489        107 VIPSNLESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR---FDEALQKAIRANLYATKQMLNLAKEC----VNLK  172 (177)
Q Consensus       107 ~~~~D~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~---~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~  172 (177)
                      ++.+|+++.      +++..+++       ++|++|||||...   ..+.|+..+++|+.++.++++++...    +...
T Consensus        78 ~~~~D~~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g  151 (278)
T 3sx2_A           78 ARQADVRDR------ESLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGG  151 (278)
T ss_dssp             EEECCTTCH------HHHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCE
T ss_pred             EEeCCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCc
Confidence            999999998      66666654       7999999999754   24678889999999999999987542    1234


Q ss_pred             CceeC
Q psy17489        173 RFCEL  177 (177)
Q Consensus       173 ~~v~v  177 (177)
                      +||++
T Consensus       152 ~iv~i  156 (278)
T 3sx2_A          152 SIVLI  156 (278)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            67653

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.64  E-value=6.4e-16  Score=123.40  Aligned_cols=121  Identities=14%  Similarity=0.171  Sum_probs=88.9

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCC-CeEEEeCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRS-KIQVIPSNLESE  115 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~D~~~~  115 (177)
                      |+|+||||+||||+++++.|++.|   ++|++++|+...... ..+         +.+.++...... ++.++.+|+.+.
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g---~~V~~~~r~~~~~~~-~~~---------~~~~~~~~~~~~~~~~~~~~Dl~d~   95 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKG---YEVHGLIRRSSNFNT-QRI---------NHIYIDPHNVNKALMKLHYADLTDA   95 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCCSSCCC-TTT---------TTTC--------CCEEEEECCTTCH
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCC---CEEEEEecCCccccc-hhh---------hhhhhccccccccceEEEECCCCCH
Confidence            689999999999999999999998   589999997643100 000         000000000012 688999999997


Q ss_pred             CCCCCHHHHHHHhcC--CcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhcCCCC-----CceeC
Q psy17489        116 HLGLSEDSEQLIKSK--VNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKECVNLK-----RFCEL  177 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~--~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~~~~~-----~~v~v  177 (177)
                            +.+..++++  +|+|||+||.....   .++..++++|+.++.+++++|.+. +++     +|||+
T Consensus        96 ------~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~~~~~~~~~v~~  160 (381)
T 1n7h_A           96 ------SSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH-TIDSGRTVKYYQA  160 (381)
T ss_dssp             ------HHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHH-HHHHCCCCEEEEE
T ss_pred             ------HHHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh-CCccCCccEEEEe
Confidence                  778888874  69999999986542   456678999999999999999987 555     88874

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.64  E-value=3.6e-15  Score=114.26  Aligned_cols=120  Identities=14%  Similarity=0.150  Sum_probs=88.7

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   ++|++++|+...  . +.+.+.+..            ...++.++.+|+
T Consensus        28 ~l~~k~vlITGasggIG~~la~~L~~~G---~~V~~~~r~~~~--~-~~~~~~l~~------------~~~~~~~~~~Dl   89 (272)
T 1yb1_A           28 SVTGEIVLITGAGHGIGRLTAYEFAKLK---SKLVLWDINKHG--L-EETAAKCKG------------LGAKVHTFVVDC   89 (272)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH--H-HHHHHHHHH------------TTCCEEEEECCT
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEEcCHHH--H-HHHHHHHHh------------cCCeEEEEEeeC
Confidence            3678999999999999999999999999   689999986421  1 111111110            124788999999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCc
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAK----ECVNLKRF  174 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~  174 (177)
                      ++.      +++..+++       ++|+||||||....       .+.++..+++|+.++.++++.+.    +. +..+|
T Consensus        90 ~~~------~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~~i  162 (272)
T 1yb1_A           90 SNR------EDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKN-NHGHI  162 (272)
T ss_dssp             TCH------HHHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEE
T ss_pred             CCH------HHHHHHHHHHHHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEE
Confidence            997      56666554       78999999997532       35667789999999888877764    34 56788


Q ss_pred             eeC
Q psy17489        175 CEL  177 (177)
Q Consensus       175 v~v  177 (177)
                      |++
T Consensus       163 v~i  165 (272)
T 1yb1_A          163 VTV  165 (272)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            764

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.64  E-value=5.8e-16  Score=114.85  Aligned_cols=103  Identities=14%  Similarity=0.124  Sum_probs=82.8

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+|+||||+|+||+++++.|++.|   ++|++++|++      .....+.               ..++.++.+|+.+. 
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g---~~V~~~~R~~------~~~~~~~---------------~~~~~~~~~D~~d~-   55 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRG---HEVLAVVRDP------QKAADRL---------------GATVATLVKEPLVL-   55 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHT---------------CTTSEEEECCGGGC-
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCC---CEEEEEEecc------ccccccc---------------CCCceEEecccccc-
Confidence            579999999999999999999999   6999999975      2222221               14789999999998 


Q ss_pred             CCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        117 LGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       117 ~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                           +.  ..++++|+|||+||......    ..+.|+.++.+++++|++. + +||||+
T Consensus        56 -----~~--~~~~~~d~vi~~ag~~~~~~----~~~~n~~~~~~l~~a~~~~-~-~~~v~~  103 (224)
T 3h2s_A           56 -----TE--ADLDSVDAVVDALSVPWGSG----RGYLHLDFATHLVSLLRNS-D-TLAVFI  103 (224)
T ss_dssp             -----CH--HHHTTCSEEEECCCCCTTSS----CTHHHHHHHHHHHHTCTTC-C-CEEEEE
T ss_pred             -----cH--hhcccCCEEEECCccCCCcc----hhhHHHHHHHHHHHHHHHc-C-CcEEEE
Confidence                 34  67789999999999852111    2467999999999999998 6 899874

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.64  E-value=3.2e-15  Score=116.31  Aligned_cols=122  Identities=11%  Similarity=0.109  Sum_probs=90.4

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      ..+++|+++||||+|+||.++++.|++.|   .+|++.+|+..      .+.+....         ......++.++.+|
T Consensus        27 ~~l~gk~vlVTGas~gIG~~la~~l~~~G---~~V~~~~r~~~------~~~~~~~~---------l~~~~~~~~~~~~D   88 (301)
T 3tjr_A           27 SGFDGRAAVVTGGASGIGLATATEFARRG---ARLVLSDVDQP------ALEQAVNG---------LRGQGFDAHGVVCD   88 (301)
T ss_dssp             CCSTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHH------HHHHHHHH---------HHHTTCCEEEEECC
T ss_pred             hccCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHH------HHHHHHHH---------HHhcCCceEEEEcc
Confidence            34689999999999999999999999999   68999998752      22221111         00123578999999


Q ss_pred             CCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh----cCCCCC
Q psy17489        112 LESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE----CVNLKR  173 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~  173 (177)
                      +++.      +++..+++       ++|++|||||...       ..++++..+++|+.++.++++++..    .+...+
T Consensus        89 v~d~------~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~  162 (301)
T 3tjr_A           89 VRHL------DEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGH  162 (301)
T ss_dssp             TTCH------HHHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEE
T ss_pred             CCCH------HHHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcE
Confidence            9998      66666554       7999999999753       2467788999999999999998744    212456


Q ss_pred             ceeC
Q psy17489        174 FCEL  177 (177)
Q Consensus       174 ~v~v  177 (177)
                      ||++
T Consensus       163 iv~i  166 (301)
T 3tjr_A          163 IAFT  166 (301)
T ss_dssp             EEEE
T ss_pred             EEEe
Confidence            7653

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.64  E-value=3.6e-15  Score=114.20  Aligned_cols=122  Identities=18%  Similarity=0.158  Sum_probs=90.3

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   .+|++++|+..  ...+.+.+....            ...++.++.+|+
T Consensus        26 ~l~~k~vlITGas~gIG~~la~~l~~~G---~~V~~~~r~~~--~~~~~~~~~~~~------------~~~~~~~~~~D~   88 (271)
T 4iin_A           26 QFTGKNVLITGASKGIGAEIAKTLASMG---LKVWINYRSNA--EVADALKNELEE------------KGYKAAVIKFDA   88 (271)
T ss_dssp             CCSCCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCH--HHHHHHHHHHHH------------TTCCEEEEECCT
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCCH--HHHHHHHHHHHh------------cCCceEEEECCC
Confidence            3578999999999999999999999999   68999998642  111222222211            235789999999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCce
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFC  175 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v  175 (177)
                      ++.      +++..+++       ++|++|||||...       ..+.++..+++|+.++.++++.+...   .+..++|
T Consensus        89 ~~~------~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv  162 (271)
T 4iin_A           89 ASE------SDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVV  162 (271)
T ss_dssp             TCH------HHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred             CCH------HHHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEE
Confidence            998      56666554       7999999999753       23678889999999999988876432   1445777


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       163 ~i  164 (271)
T 4iin_A          163 NV  164 (271)
T ss_dssp             EE
T ss_pred             EE
Confidence            63

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.64  E-value=3.6e-15  Score=113.26  Aligned_cols=116  Identities=12%  Similarity=0.093  Sum_probs=87.3

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|+.      +...+....            ...++.++.+|++
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~------~~~~~~~~~------------~~~~~~~~~~D~~   61 (254)
T 1hdc_A            3 LSGKTVIITGGARGLGAEAARQAVAAG---ARVVLADVLD------EEGAATARE------------LGDAARYQHLDVT   61 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHHT------------TGGGEEEEECCTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCH------HHHHHHHHH------------hCCceeEEEecCC
Confidence            568999999999999999999999999   6899998864      222222211            1246788999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHH----HhcCCCCCce
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLA----KECVNLKRFC  175 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v  175 (177)
                      +.      +++..+++       ++|++|||||...       ..+.|+..+++|+.++.++.+.+    ++. +..+||
T Consensus        62 ~~------~~~~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv  134 (254)
T 1hdc_A           62 IE------EDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA-GGGSIV  134 (254)
T ss_dssp             CH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEE
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEE
Confidence            97      66666654       7999999999753       23678889999999998665554    444 556787


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       135 ~i  136 (254)
T 1hdc_A          135 NI  136 (254)
T ss_dssp             EE
T ss_pred             EE
Confidence            64

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.64  E-value=2.7e-15  Score=114.98  Aligned_cols=115  Identities=16%  Similarity=0.213  Sum_probs=87.9

Q ss_pred             cccccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEE
Q psy17489         29 KVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVI  108 (177)
Q Consensus        29 ~~~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  108 (177)
                      +.....++|+++||||+|+||.++++.|++.|   ++|++++|+....                         ...+.++
T Consensus         7 ~~~~~~~~k~vlVTGas~GIG~aia~~l~~~G---~~V~~~~r~~~~~-------------------------~~~~~~~   58 (269)
T 3vtz_A            7 HHMEEFTDKVAIVTGGSSGIGLAVVDALVRYG---AKVVSVSLDEKSD-------------------------VNVSDHF   58 (269)
T ss_dssp             ---CTTTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESCC--C-------------------------TTSSEEE
T ss_pred             ccccCCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCchhc-------------------------cCceeEE
Confidence            34456789999999999999999999999999   6899999876321                         1356788


Q ss_pred             eCCCCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCC
Q psy17489        109 PSNLESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNL  171 (177)
Q Consensus       109 ~~D~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~  171 (177)
                      .+|+++.      +++..+++       ++|++|||||...       ..+.|+..+++|+.++.++++++...   .+.
T Consensus        59 ~~Dv~~~------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~  132 (269)
T 3vtz_A           59 KIDVTNE------EEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGH  132 (269)
T ss_dssp             ECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred             EecCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC
Confidence            9999998      66666554       7999999999753       24667889999999999999886542   144


Q ss_pred             CCceeC
Q psy17489        172 KRFCEL  177 (177)
Q Consensus       172 ~~~v~v  177 (177)
                      .++|++
T Consensus       133 g~iv~i  138 (269)
T 3vtz_A          133 GSIINI  138 (269)
T ss_dssp             EEEEEE
T ss_pred             CEEEEE
Confidence            577763

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.64  E-value=2.3e-15  Score=115.15  Aligned_cols=121  Identities=13%  Similarity=0.152  Sum_probs=89.2

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      |+++|+++||||+|+||.++++.|++.|   .+|++.+|+...  . +.+.+.+.            ....++.++.+|+
T Consensus         1 Ml~~k~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~--~-~~~~~~l~------------~~~~~~~~~~~Dv   62 (264)
T 3tfo_A            1 MVMDKVILITGASGGIGEGIARELGVAG---AKILLGARRQAR--I-EAIATEIR------------DAGGTALAQVLDV   62 (264)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESSHHH--H-HHHHHHHH------------HTTCEEEEEECCT
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCC---CEEEEEECCHHH--H-HHHHHHHH------------hcCCcEEEEEcCC
Confidence            3578999999999999999999999999   689999987421  1 12221111            1235688899999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCce
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFC  175 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v  175 (177)
                      ++.      +++..+++       ++|++|||||...       ..+.|+..+++|+.++.++.+.+...   .+..+||
T Consensus        63 ~d~------~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV  136 (264)
T 3tfo_A           63 TDR------HSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQII  136 (264)
T ss_dssp             TCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred             CCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEE
Confidence            998      56665543       7999999999753       24678889999999999998876431   1445677


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       137 ~i  138 (264)
T 3tfo_A          137 NI  138 (264)
T ss_dssp             EE
T ss_pred             EE
Confidence            63

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.63  E-value=1.5e-15  Score=115.91  Aligned_cols=124  Identities=10%  Similarity=0.217  Sum_probs=89.8

Q ss_pred             ccccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEe
Q psy17489         30 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIP  109 (177)
Q Consensus        30 ~~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  109 (177)
                      +...+++|+++||||+|+||.++++.|++.|   ++|++.+|+..      .+.+....         ......++.++.
T Consensus         5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~------~~~~~~~~---------~~~~~~~~~~~~   66 (264)
T 3ucx_A            5 MGGLLTDKVVVISGVGPALGTTLARRCAEQG---ADLVLAARTVE------RLEDVAKQ---------VTDTGRRALSVG   66 (264)
T ss_dssp             --CTTTTCEEEEESCCTTHHHHHHHHHHHTT---CEEEEEESCHH------HHHHHHHH---------HHHTTCCEEEEE
T ss_pred             cCCCcCCcEEEEECCCcHHHHHHHHHHHHCc---CEEEEEeCCHH------HHHHHHHH---------HHhcCCcEEEEE
Confidence            3445789999999999999999999999999   68999998642      22221111         001235789999


Q ss_pred             CCCCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHhc--CCCC
Q psy17489        110 SNLESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKEC--VNLK  172 (177)
Q Consensus       110 ~D~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~  172 (177)
                      +|+++.      +++..+++       ++|++|||||...        ..+.|+..+++|+.++.++++.+...  .+-.
T Consensus        67 ~Dv~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g  140 (264)
T 3ucx_A           67 TDITDD------AQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKG  140 (264)
T ss_dssp             CCTTCH------HHHHHHHHHHHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTC
T ss_pred             cCCCCH------HHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Confidence            999998      66666554       7899999998642        13678889999999999999886542  0114


Q ss_pred             CceeC
Q psy17489        173 RFCEL  177 (177)
Q Consensus       173 ~~v~v  177 (177)
                      ++|++
T Consensus       141 ~iv~i  145 (264)
T 3ucx_A          141 AVVNV  145 (264)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            67653

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.63  E-value=2.1e-15  Score=116.05  Aligned_cols=125  Identities=21%  Similarity=0.260  Sum_probs=89.2

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      ..+++|+++||||+|+||.++++.|++.|   ++|++++|+...  . +...+.+..         ......++.++.+|
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~--~-~~~~~~l~~---------~~~~~~~~~~~~~D   71 (281)
T 3svt_A            7 LSFQDRTYLVTGGGSGIGKGVAAGLVAAG---ASVMIVGRNPDK--L-AGAVQELEA---------LGANGGAIRYEPTD   71 (281)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH--H-HHHHHHHHT---------TCCSSCEEEEEECC
T ss_pred             cCcCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHHH---------hCCCCceEEEEeCC
Confidence            34678999999999999999999999999   689999886521  1 111111110         01112368899999


Q ss_pred             CCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCC
Q psy17489        112 LESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKEC---VNLKR  173 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~  173 (177)
                      +++.      +++..+++       ++|++|||||...        ..+.|+..+++|+.++.++++++.+.   .+-.+
T Consensus        72 v~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~  145 (281)
T 3svt_A           72 ITNE------DETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGS  145 (281)
T ss_dssp             TTSH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEE
T ss_pred             CCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcE
Confidence            9998      56666544       7899999999621        24678889999999999999987653   13346


Q ss_pred             ceeC
Q psy17489        174 FCEL  177 (177)
Q Consensus       174 ~v~v  177 (177)
                      ||++
T Consensus       146 iv~i  149 (281)
T 3svt_A          146 FVGI  149 (281)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            7763

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.63  E-value=4.4e-15  Score=113.13  Aligned_cols=115  Identities=16%  Similarity=0.217  Sum_probs=85.7

Q ss_pred             cccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489         31 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS  110 (177)
Q Consensus        31 ~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  110 (177)
                      ...+++|+++||||+|+||.++++.|++.|.+..+|++++|+....   +.+.++..             ...++.++.+
T Consensus        16 ~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~---~~~~~l~~-------------~~~~~~~~~~   79 (267)
T 1sny_A           16 PRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQA---KELEDLAK-------------NHSNIHILEI   79 (267)
T ss_dssp             ----CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSC---HHHHHHHH-------------HCTTEEEEEC
T ss_pred             ccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhh---HHHHHhhc-------------cCCceEEEEe
Confidence            3446789999999999999999999999982224899999976543   22222211             1257899999


Q ss_pred             CCCCCCCCCCHHHHHHHhc---------CCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        111 NLESEHLGLSEDSEQLIKS---------KVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       111 D~~~~~~~~~~~~~~~~~~---------~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      |+++.      +++..+++         ++|+||||||...        ..+.++..+++|+.++.++++++..
T Consensus        80 Dl~~~------~~v~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  147 (267)
T 1sny_A           80 DLRNF------DAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLP  147 (267)
T ss_dssp             CTTCG------GGHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cCCCh------HHHHHHHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHH
Confidence            99998      56666554         7999999999754        1466778899999999999998754

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.63  E-value=5.3e-15  Score=113.78  Aligned_cols=128  Identities=16%  Similarity=0.092  Sum_probs=91.9

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCC-------ChHHHHHHHHhhhhhhcccccCcccCCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGS-------SPEERVKNMLNSVIFDRLNKEVPDFRSK  104 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ..+++|+++||||+|+||.++++.|++.|   ++|++++|+....       ...+.+.+....         ......+
T Consensus        11 ~~l~gk~~lVTGas~gIG~a~a~~la~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~   78 (280)
T 3pgx_A           11 GSLQGRVAFITGAARGQGRSHAVRLAAEG---ADIIACDICAPVSASVTYAPASPEDLDETARL---------VEDQGRK   78 (280)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEECCSCCCTTCCSCCCCHHHHHHHHHH---------HHTTTCC
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeccccccccccccccCHHHHHHHHHH---------HHhcCCe
Confidence            34689999999999999999999999999   6899998853110       011223222211         1112357


Q ss_pred             eEEEeCCCCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh---
Q psy17489        105 IQVIPSNLESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE---  167 (177)
Q Consensus       105 v~~~~~D~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~---  167 (177)
                      +.++.+|+++.      +++..+++       ++|++|||||...       ..+.|+..+++|+.++.++++.+..   
T Consensus        79 ~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~  152 (280)
T 3pgx_A           79 ALTRVLDVRDD------AALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMI  152 (280)
T ss_dssp             EEEEECCTTCH------HHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             EEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence            88999999998      66666554       7999999999754       2467888999999999999998743   


Q ss_pred             -cCCCCCceeC
Q psy17489        168 -CVNLKRFCEL  177 (177)
Q Consensus       168 -~~~~~~~v~v  177 (177)
                       .+...+||++
T Consensus       153 ~~~~~g~iv~i  163 (280)
T 3pgx_A          153 EAGNGGSIVVV  163 (280)
T ss_dssp             HHCSCEEEEEE
T ss_pred             hcCCCCEEEEE
Confidence             2124567763

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.63  E-value=4.2e-15  Score=112.77  Aligned_cols=122  Identities=18%  Similarity=0.203  Sum_probs=88.8

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      ..+++|+++||||+|+||.++++.|++.|   ++|++.+|+...  . +.+.+.+..           ....++.++.+|
T Consensus         8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~--~-~~~~~~~~~-----------~~~~~~~~~~~D   70 (252)
T 3f1l_A            8 DLLNDRIILVTGASDGIGREAAMTYARYG---ATVILLGRNEEK--L-RQVASHINE-----------ETGRQPQWFILD   70 (252)
T ss_dssp             TTTTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHH--H-HHHHHHHHH-----------HHSCCCEEEECC
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHHh-----------hcCCCceEEEEe
Confidence            35789999999999999999999999999   689999987521  1 111111110           012367889999


Q ss_pred             C--CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHH----hcCC
Q psy17489        112 L--ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAK----ECVN  170 (177)
Q Consensus       112 ~--~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~----~~~~  170 (177)
                      +  ++.      +++..+++       ++|++|||||...        ..+.|+..+++|+.++.++++++.    +. +
T Consensus        71 ~~~~~~------~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~  143 (252)
T 3f1l_A           71 LLTCTS------ENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKS-D  143 (252)
T ss_dssp             TTTCCH------HHHHHHHHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTS-S
T ss_pred             cccCCH------HHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHC-C
Confidence            9  665      55555543       7999999999742        246788899999999999999884    33 5


Q ss_pred             CCCceeC
Q psy17489        171 LKRFCEL  177 (177)
Q Consensus       171 ~~~~v~v  177 (177)
                      ..++|++
T Consensus       144 ~g~iv~i  150 (252)
T 3f1l_A          144 AGSLVFT  150 (252)
T ss_dssp             SCEEEEE
T ss_pred             CCEEEEE
Confidence            5677764

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.63  E-value=1.7e-15  Score=115.26  Aligned_cols=122  Identities=16%  Similarity=0.130  Sum_probs=89.0

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|+... .. +.+.+.+..           ....++.++.+|++
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~-~~-~~~~~~~~~-----------~~~~~~~~~~~D~~   65 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQG---ADIVLNGFGDAA-EI-EKVRAGLAA-----------QHGVKVLYDGADLS   65 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEECCSCHH-HH-HHHHHHHHH-----------HHTSCEEEECCCTT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcC---CEEEEEeCCcch-HH-HHHHHHHHh-----------ccCCcEEEEECCCC
Confidence            568999999999999999999999999   689998886521 01 111111110           00246888999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCcee
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFCE  176 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~  176 (177)
                      +.      +++..+++       ++|++|||||...       ..+.|+..+++|+.++.++++.+...   .+..+||+
T Consensus        66 ~~------~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~  139 (260)
T 1x1t_A           66 KG------EAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIIN  139 (260)
T ss_dssp             SH------HHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred             CH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence            98      66666554       7999999999753       24678889999999999998887531   14567776


Q ss_pred             C
Q psy17489        177 L  177 (177)
Q Consensus       177 v  177 (177)
                      +
T Consensus       140 i  140 (260)
T 1x1t_A          140 I  140 (260)
T ss_dssp             E
T ss_pred             E
Confidence            4

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.63  E-value=1.8e-15  Score=116.13  Aligned_cols=123  Identities=15%  Similarity=0.143  Sum_probs=91.0

Q ss_pred             cccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489         31 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS  110 (177)
Q Consensus        31 ~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  110 (177)
                      ...+++|+++||||+|+||.++++.|++.|   ++|++.+|+...  . +.+.+.+..            ...++.++.+
T Consensus        23 ~~~l~~k~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~--~-~~~~~~~~~------------~~~~~~~~~~   84 (270)
T 3ftp_A           23 DKTLDKQVAIVTGASRGIGRAIALELARRG---AMVIGTATTEAG--A-EGIGAAFKQ------------AGLEGRGAVL   84 (270)
T ss_dssp             CCTTTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSHHH--H-HHHHHHHHH------------HTCCCEEEEC
T ss_pred             ccCCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHHh------------cCCcEEEEEE
Confidence            345789999999999999999999999999   689999986421  1 122221111            2256788999


Q ss_pred             CCCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCC
Q psy17489        111 NLESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKR  173 (177)
Q Consensus       111 D~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~  173 (177)
                      |+++.      +++..+++       ++|++|||||...       ..+.|+..+++|+.++.++++++...   .+..+
T Consensus        85 Dv~d~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~  158 (270)
T 3ftp_A           85 NVNDA------TAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGR  158 (270)
T ss_dssp             CTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred             eCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCE
Confidence            99998      56666554       7999999999753       24678889999999999999987532   13456


Q ss_pred             ceeC
Q psy17489        174 FCEL  177 (177)
Q Consensus       174 ~v~v  177 (177)
                      ||++
T Consensus       159 iv~i  162 (270)
T 3ftp_A          159 IVNI  162 (270)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            7763

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.63  E-value=2.2e-15  Score=113.42  Aligned_cols=120  Identities=19%  Similarity=0.196  Sum_probs=88.6

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|+...  . +.+.+.+..           ....++.++.+|++
T Consensus         5 ~~~~~vlVtGasggiG~~la~~l~~~G---~~V~~~~r~~~~--~-~~~~~~~~~-----------~~~~~~~~~~~D~~   67 (248)
T 2pnf_A            5 LQGKVSLVTGSTRGIGRAIAEKLASAG---STVIITGTSGER--A-KAVAEEIAN-----------KYGVKAHGVEMNLL   67 (248)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSHHH--H-HHHHHHHHH-----------HHCCCEEEEECCTT
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCChHH--H-HHHHHHHHh-----------hcCCceEEEEccCC
Confidence            578999999999999999999999999   689999986421  1 111111110           01246889999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCce
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAK----ECVNLKRFC  175 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v  175 (177)
                      +.      +++..+++       ++|+|||+||...       ..+.++..+++|+.++.++++.+.    +. +.++||
T Consensus        68 ~~------~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~iv  140 (248)
T 2pnf_A           68 SE------ESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQ-RWGRIV  140 (248)
T ss_dssp             CH------HHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHH-TCEEEE
T ss_pred             CH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCcEEE
Confidence            98      67776665       7999999999753       235677899999999988877653    34 567888


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       141 ~~  142 (248)
T 2pnf_A          141 NI  142 (248)
T ss_dssp             EE
T ss_pred             EE
Confidence            74

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.63  E-value=3.8e-15  Score=113.34  Aligned_cols=120  Identities=16%  Similarity=0.140  Sum_probs=89.1

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   ++|++++|+..      .+.+....     +    .....++.++.+|+
T Consensus        11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~------~~~~~~~~-----l----~~~~~~~~~~~~D~   72 (260)
T 2zat_A           11 PLENKVALVTASTDGIGLAIARRLAQDG---AHVVVSSRKQE------NVDRTVAT-----L----QGEGLSVTGTVCHV   72 (260)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESCHH------HHHHHHHH-----H----HHTTCCEEEEECCT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHH------HHHHHHHH-----H----HhcCCceEEEEccC
Confidence            3678999999999999999999999999   68999998642      12111110     0    00124688899999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHH----hcCCCCC
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAK----ECVNLKR  173 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~  173 (177)
                      ++.      +++..+++       ++|++|||||...        ..+.|+..+++|+.++.++++.+.    +. +..+
T Consensus        73 ~~~------~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~g~  145 (260)
T 2zat_A           73 GKA------EDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKR-GGGS  145 (260)
T ss_dssp             TCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEE
T ss_pred             CCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCE
Confidence            997      56665544       7999999999642        135678899999999999988875    33 5667


Q ss_pred             ceeC
Q psy17489        174 FCEL  177 (177)
Q Consensus       174 ~v~v  177 (177)
                      ||++
T Consensus       146 iv~i  149 (260)
T 2zat_A          146 VLIV  149 (260)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            8764

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.63  E-value=1.7e-15  Score=119.53  Aligned_cols=105  Identities=18%  Similarity=0.371  Sum_probs=83.8

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCC-hHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSS-PEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      .+|+|+||||+|+||+++++.|++.|   ++|++++|++.... ....+..+.               ..++.++.+|+.
T Consensus         9 ~~~~IlVtGatG~iG~~l~~~L~~~g---~~V~~l~R~~~~~~~~~~~~~~l~---------------~~~v~~~~~Dl~   70 (346)
T 3i6i_A            9 PKGRVLIAGATGFIGQFVATASLDAH---RPTYILARPGPRSPSKAKIFKALE---------------DKGAIIVYGLIN   70 (346)
T ss_dssp             --CCEEEECTTSHHHHHHHHHHHHTT---CCEEEEECSSCCCHHHHHHHHHHH---------------HTTCEEEECCTT
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCC---CCEEEEECCCCCChhHHHHHHHHH---------------hCCcEEEEeecC
Confidence            35799999999999999999999998   58999999763321 111122211               157899999999


Q ss_pred             CCCCCCCHHHHHHHhc--CCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCC-CCCcee
Q psy17489        114 SEHLGLSEDSEQLIKS--KVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVN-LKRFCE  176 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~--~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~~~v~  176 (177)
                      +.      +.+..+++  ++|+|||+|+..            |+.++.+++++|++. + +++||+
T Consensus        71 d~------~~l~~~~~~~~~d~Vi~~a~~~------------n~~~~~~l~~aa~~~-g~v~~~v~  117 (346)
T 3i6i_A           71 EQ------EAMEKILKEHEIDIVVSTVGGE------------SILDQIALVKAMKAV-GTIKRFLP  117 (346)
T ss_dssp             CH------HHHHHHHHHTTCCEEEECCCGG------------GGGGHHHHHHHHHHH-CCCSEEEC
T ss_pred             CH------HHHHHHHhhCCCCEEEECCchh------------hHHHHHHHHHHHHHc-CCceEEee
Confidence            97      88999999  999999999972            788889999999998 6 999885

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.63  E-value=5.6e-15  Score=113.08  Aligned_cols=119  Identities=15%  Similarity=0.241  Sum_probs=89.4

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|+..      ........     +    . ...++.++.+|++
T Consensus        14 l~~k~vlITGasggiG~~~a~~l~~~G---~~V~~~~r~~~------~~~~~~~~-----~----~-~~~~~~~~~~D~~   74 (278)
T 2bgk_A           14 LQDKVAIITGGAGGIGETTAKLFVRYG---AKVVIADIADD------HGQKVCNN-----I----G-SPDVISFVHCDVT   74 (278)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHH------HHHHHHHH-----H----C-CTTTEEEEECCTT
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEcCChh------HHHHHHHH-----h----C-CCCceEEEECCCC
Confidence            578999999999999999999999999   58999888641      11111110     0    0 1136889999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc---------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCc
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF---------DEALQKAIRANLYATKQMLNLAKEC---VNLKRF  174 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~---------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~  174 (177)
                      +.      +++..+++       ++|+||||||....         .+.++..+++|+.++.++++.+...   .+..+|
T Consensus        75 ~~------~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~i  148 (278)
T 2bgk_A           75 KD------EDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSI  148 (278)
T ss_dssp             CH------HHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEE
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeE
Confidence            98      66766654       79999999997531         2677889999999999999988653   145678


Q ss_pred             eeC
Q psy17489        175 CEL  177 (177)
Q Consensus       175 v~v  177 (177)
                      |++
T Consensus       149 v~i  151 (278)
T 2bgk_A          149 VFT  151 (278)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            764

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.63  E-value=2.9e-15  Score=113.19  Aligned_cols=120  Identities=18%  Similarity=0.176  Sum_probs=88.4

Q ss_pred             cccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489         31 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS  110 (177)
Q Consensus        31 ~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  110 (177)
                      ....++|+++||||+|+||.++++.|++.|   ++|++.+|+.      +.+.+....            ...++.++.+
T Consensus         9 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G---~~V~~~~r~~------~~~~~~~~~------------~~~~~~~~~~   67 (249)
T 3f9i_A            9 MIDLTGKTSLITGASSGIGSAIARLLHKLG---SKVIISGSNE------EKLKSLGNA------------LKDNYTIEVC   67 (249)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHHH------------HCSSEEEEEC
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEcCCH------HHHHHHHHH------------hccCccEEEc
Confidence            345678999999999999999999999999   6899999864      223222211            1246888999


Q ss_pred             CCCCCCCCCCHHHHHHHhc---CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCceeC
Q psy17489        111 NLESEHLGLSEDSEQLIKS---KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VNLKRFCEL  177 (177)
Q Consensus       111 D~~~~~~~~~~~~~~~~~~---~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~v  177 (177)
                      |+++.      +.+..+++   ++|++|||||....       .++++..+++|+.++.++++.+...   .+..+||++
T Consensus        68 D~~~~------~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~i  141 (249)
T 3f9i_A           68 NLANK------EECSNLISKTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINI  141 (249)
T ss_dssp             CTTSH------HHHHHHHHTCSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCH------HHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEE
Confidence            99998      67777776   68999999997532       3567788999999999998877432   144577764

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.63  E-value=3.7e-15  Score=113.24  Aligned_cols=105  Identities=22%  Similarity=0.285  Sum_probs=81.6

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   ++|++++|+.      +...+.               ...++.++.+|+
T Consensus         6 ~l~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~------~~~~~~---------------~~~~~~~~~~D~   61 (257)
T 3tl3_A            6 EIRDAVAVVTGGASGLGLATTKRLLDAG---AQVVVLDIRG------EDVVAD---------------LGDRARFAAADV   61 (257)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHHT---CEEEEEESSC------HHHHHH---------------TCTTEEEEECCT
T ss_pred             eecCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCch------HHHHHh---------------cCCceEEEECCC
Confidence            3578999999999999999999999999   6899998843      222211               125788999999


Q ss_pred             CCCCCCCCHHHHHHHhc------CCcEEEEcCcccC-----------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        113 ESEHLGLSEDSEQLIKS------KVNIIFHCAASLR-----------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~------~~d~vi~~aa~~~-----------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      ++.      +++..+++      ++|++|||||...           ..+.|+..+++|+.++.++++++..
T Consensus        62 ~~~------~~v~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  127 (257)
T 3tl3_A           62 TDE------AAVASALDLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAE  127 (257)
T ss_dssp             TCH------HHHHHHHHHHHHHSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCH------HHHHHHHHHHHHhCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHH
Confidence            998      66666654      8999999999742           2356788999999999999998865

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.63  E-value=4.5e-15  Score=112.93  Aligned_cols=112  Identities=12%  Similarity=0.233  Sum_probs=86.4

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      ..++||+++||||+++||.++++.|++.|   ++|++.+|++      +.+++..++         ......++.++.+|
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~G---a~Vv~~~~~~------~~~~~~~~~---------i~~~g~~~~~~~~D   64 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALND---SIVVAVELLE------DRLNQIVQE---------LRGMGKEVLGVKAD   64 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHHH---------HHHTTCCEEEEECC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEECCH------HHHHHHHHH---------HHhcCCcEEEEEcc
Confidence            35789999999999999999999999999   6899999865      222222111         11134678999999


Q ss_pred             CCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        112 LESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      ++++      ++++.++       .++|++|||||...        ..++|+..+++|+.+++++.+++.+
T Consensus        65 vt~~------~~v~~~~~~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p  129 (254)
T 4fn4_A           65 VSKK------KDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIP  129 (254)
T ss_dssp             TTSH------HHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCCH------HHHHHHHHHHHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            9998      5666554       37999999999642        1467899999999999999888754

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.63  E-value=5.2e-15  Score=113.92  Aligned_cols=118  Identities=13%  Similarity=0.047  Sum_probs=89.5

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   ++|++++|+.      +...+....            ...++.++.+|+
T Consensus        26 ~l~gk~vlVTGas~gIG~aia~~la~~G---~~V~~~~r~~------~~~~~~~~~------------~~~~~~~~~~Dv   84 (277)
T 3gvc_A           26 DLAGKVAIVTGAGAGIGLAVARRLADEG---CHVLCADIDG------DAADAAATK------------IGCGAAACRVDV   84 (277)
T ss_dssp             -CTTCEEEETTTTSTHHHHHHHHHHHTT---CEEEEEESSH------HHHHHHHHH------------HCSSCEEEECCT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCH------HHHHHHHHH------------cCCcceEEEecC
Confidence            4689999999999999999999999999   6899999864      222222211            125788999999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCce
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFC  175 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v  175 (177)
                      ++.      +++..+++       ++|++|||||...       ..+.|+..+++|+.++.++++++...   .+..+||
T Consensus        85 ~d~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv  158 (277)
T 3gvc_A           85 SDE------QQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIV  158 (277)
T ss_dssp             TCH------HHHHHHHHHHHHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred             CCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEE
Confidence            998      56665543       7899999999753       24678889999999999999987542   1445676


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       159 ~i  160 (277)
T 3gvc_A          159 NL  160 (277)
T ss_dssp             EE
T ss_pred             EE
Confidence            53

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.63  E-value=4e-15  Score=114.31  Aligned_cols=113  Identities=12%  Similarity=0.139  Sum_probs=88.3

Q ss_pred             cccccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEE
Q psy17489         29 KVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVI  108 (177)
Q Consensus        29 ~~~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  108 (177)
                      .|.+.++||+++||||+++||.++++.|++.|   ++|++.+|+.      +.+.+...+            ...++..+
T Consensus        22 ~Ms~rL~gKvalVTGas~GIG~aiA~~la~~G---a~V~i~~r~~------~~l~~~~~~------------~g~~~~~~   80 (273)
T 4fgs_A           22 SMTQRLNAKIAVITGATSGIGLAAAKRFVAEG---ARVFITGRRK------DVLDAAIAE------------IGGGAVGI   80 (273)
T ss_dssp             ---CTTTTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHHH------------HCTTCEEE
T ss_pred             hhcchhCCCEEEEeCcCCHHHHHHHHHHHHCC---CEEEEEECCH------HHHHHHHHH------------cCCCeEEE
Confidence            34456899999999999999999999999999   7999999875      333333221            13567889


Q ss_pred             eCCCCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        109 PSNLESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       109 ~~D~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                      ++|++++      ++++.++       .++|++|||||...       ..++|+..+++|+.+++++.+.+...
T Consensus        81 ~~Dv~~~------~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~  148 (273)
T 4fgs_A           81 QADSANL------AELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPL  148 (273)
T ss_dssp             ECCTTCH------HHHHHHHHHHHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTT
T ss_pred             EecCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            9999998      5565553       37899999999753       25789999999999999999988653

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.63  E-value=4.7e-15  Score=115.21  Aligned_cols=130  Identities=15%  Similarity=0.070  Sum_probs=93.5

Q ss_pred             ccccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCC------ChHHHHHHHHhhhhhhcccccCcccCC
Q psy17489         30 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGS------SPEERVKNMLNSVIFDRLNKEVPDFRS  103 (177)
Q Consensus        30 ~~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      +...+++|+++||||+|+||.++++.|++.|   ++|++++|++...      +..+.+.+....         ......
T Consensus        22 m~~~l~gk~~lVTGas~GIG~aia~~la~~G---~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~   89 (299)
T 3t7c_A           22 MAGKVEGKVAFITGAARGQGRSHAITLAREG---ADIIAIDVCKQLDGVKLPMSTPDDLAETVRQ---------VEALGR   89 (299)
T ss_dssp             CCCTTTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEECCSCCTTCCSCCCCHHHHHHHHHH---------HHHTTC
T ss_pred             cccccCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEecccccccccccccCHHHHHHHHHH---------HHhcCC
Confidence            3445789999999999999999999999999   6899999874211      112333322211         011235


Q ss_pred             CeEEEeCCCCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        104 KIQVIPSNLESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       104 ~v~~~~~D~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                      ++.++.+|+++.      +++..+++       ++|++|||||...        ..+.|+..+++|+.++.++++++...
T Consensus        90 ~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  163 (299)
T 3t7c_A           90 RIIASQVDVRDF------DAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPH  163 (299)
T ss_dssp             CEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             ceEEEECCCCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            789999999998      66666554       7999999999643        24678889999999999999987542


Q ss_pred             ----CCCCCceeC
Q psy17489        169 ----VNLKRFCEL  177 (177)
Q Consensus       169 ----~~~~~~v~v  177 (177)
                          ++..+||++
T Consensus       164 ~~~~~~~g~Iv~i  176 (299)
T 3t7c_A          164 IMAGKRGGSIVFT  176 (299)
T ss_dssp             HHHTTSCEEEEEE
T ss_pred             HHhcCCCcEEEEE
Confidence                234567763

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.63  E-value=3.9e-15  Score=113.11  Aligned_cols=125  Identities=14%  Similarity=0.175  Sum_probs=88.0

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhccccc---CcccCCCeEEEe
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKE---VPDFRSKIQVIP  109 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~  109 (177)
                      .+++|+++||||+|+||.++++.|++.|   ++|++++|+.      +...+....     +...   ......++.++.
T Consensus         4 ~~~~k~vlITGasggiG~~la~~l~~~G---~~V~~~~r~~------~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~   69 (264)
T 2pd6_A            4 RLRSALALVTGAGSGIGRAVSVRLAGEG---ATVAACDLDR------AAAQETVRL-----LGGPGSKEGPPRGNHAAFQ   69 (264)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSH------HHHHHHHHT-----C------------CCEEEE
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCh------HHHHHHHHH-----HHhcCccccccCcceEEEE
Confidence            3578999999999999999999999999   6899999864      222222110     0000   000014688999


Q ss_pred             CCCCCCCCCCCHHHHHHHhc-------CC-cEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CC-
Q psy17489        110 SNLESEHLGLSEDSEQLIKS-------KV-NIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VN-  170 (177)
Q Consensus       110 ~D~~~~~~~~~~~~~~~~~~-------~~-d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~-  170 (177)
                      +|+++.      +.+..+++       ++ |+|||+||...       ..+.++..+++|+.++.++++++.+.   .+ 
T Consensus        70 ~D~~~~------~~~~~~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~  143 (264)
T 2pd6_A           70 ADVSEA------RAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGC  143 (264)
T ss_dssp             CCTTSH------HHHHHHHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred             ecCCCH------HHHHHHHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCC
Confidence            999997      56666554       45 99999999753       24677889999999999999987653   12 


Q ss_pred             CCCceeC
Q psy17489        171 LKRFCEL  177 (177)
Q Consensus       171 ~~~~v~v  177 (177)
                      ..+||++
T Consensus       144 ~g~iv~i  150 (264)
T 2pd6_A          144 RGSIINI  150 (264)
T ss_dssp             CEEEEEE
T ss_pred             CceEEEE
Confidence            4577764

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.63  E-value=2.2e-15  Score=116.00  Aligned_cols=103  Identities=15%  Similarity=0.212  Sum_probs=85.1

Q ss_pred             ceEEEecCCcchHHHHHHHHHhh-CCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRS-FPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~-g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      |+|+||||+|+||+++++.|.+. |   .+|++++|++.....               +      ...++.++.+|+.+.
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g---~~V~~~~R~~~~~~~---------------~------~~~~v~~~~~D~~d~   56 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHI---DHFHIGVRNVEKVPD---------------D------WRGKVSVRQLDYFNQ   56 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTC---TTEEEEESSGGGSCG---------------G------GBTTBEEEECCTTCH
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCC---CcEEEEECCHHHHHH---------------h------hhCCCEEEEcCCCCH
Confidence            57999999999999999999887 7   689999997632110               0      125789999999998


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                            +.+..+++++|+|||+|+.....       ..|+.++.+++++|++. +++||||+
T Consensus        57 ------~~l~~~~~~~d~vi~~a~~~~~~-------~~~~~~~~~l~~aa~~~-gv~~iv~~  104 (289)
T 3e48_A           57 ------ESMVEAFKGMDTVVFIPSIIHPS-------FKRIPEVENLVYAAKQS-GVAHIIFI  104 (289)
T ss_dssp             ------HHHHHHTTTCSEEEECCCCCCSH-------HHHHHHHHHHHHHHHHT-TCCEEEEE
T ss_pred             ------HHHHHHHhCCCEEEEeCCCCccc-------hhhHHHHHHHHHHHHHc-CCCEEEEE
Confidence                  78999999999999999975432       34788999999999998 89999984

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.63  E-value=4.8e-15  Score=113.51  Aligned_cols=121  Identities=17%  Similarity=0.182  Sum_probs=86.4

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      ++++|+++||||+|+||.++++.|++.|   .+|++.+++..  ...+.+.+....            ...++.++.+|+
T Consensus        24 ~~~~k~~lVTGas~GIG~aia~~la~~G---~~Vv~~~~~~~--~~~~~~~~~~~~------------~~~~~~~~~~Dl   86 (267)
T 3u5t_A           24 METNKVAIVTGASRGIGAAIAARLASDG---FTVVINYAGKA--AAAEEVAGKIEA------------AGGKALTAQADV   86 (267)
T ss_dssp             ---CCEEEEESCSSHHHHHHHHHHHHHT---CEEEEEESSCS--HHHHHHHHHHHH------------TTCCEEEEECCT
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEcCCCH--HHHHHHHHHHHh------------cCCeEEEEEcCC
Confidence            3578999999999999999999999999   58887755432  111222222211            235788999999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc-CCCCCcee
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC-VNLKRFCE  176 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~  176 (177)
                      ++.      +++..+++       ++|++|||||....       .+.|+..+++|+.++.++++.+... ..-.++|+
T Consensus        87 ~~~------~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~  159 (267)
T 3u5t_A           87 SDP------AAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIIN  159 (267)
T ss_dssp             TCH------HHHHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             CCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEE
Confidence            998      66666554       78999999997531       4668889999999999999988653 11235655

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.63  E-value=5.9e-15  Score=112.76  Aligned_cols=109  Identities=14%  Similarity=0.198  Sum_probs=88.0

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|+...                          ..++.++.+|++
T Consensus         6 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~--------------------------~~~~~~~~~Dl~   56 (264)
T 2dtx_A            6 LRDKVVIVTGASMGIGRAIAERFVDEG---SKVIDLSIHDPG--------------------------EAKYDHIECDVT   56 (264)
T ss_dssp             GTTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESSCCC--------------------------SCSSEEEECCTT
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEecCccc--------------------------CCceEEEEecCC
Confidence            578999999999999999999999999   689999987532                          146788999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCcee
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFCE  176 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~  176 (177)
                      +.      +++..+++       ++|++|||||...       ..+.|+..+++|+.++.++++.+...   .+..+||+
T Consensus        57 ~~------~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~  130 (264)
T 2dtx_A           57 NP------DQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVN  130 (264)
T ss_dssp             CH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEE
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEE
Confidence            98      66666554       7999999999753       24678889999999999999887642   14567876


Q ss_pred             C
Q psy17489        177 L  177 (177)
Q Consensus       177 v  177 (177)
                      +
T Consensus       131 i  131 (264)
T 2dtx_A          131 I  131 (264)
T ss_dssp             E
T ss_pred             E
Confidence            4

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.63  E-value=2.9e-15  Score=115.93  Aligned_cols=126  Identities=15%  Similarity=0.170  Sum_probs=92.2

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      ..+++|+++||||+|+||.++++.|++.|....+|++.+|+...  . +.+.+.+..          .....++.++.+|
T Consensus        29 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~--~-~~~~~~l~~----------~~~~~~~~~~~~D   95 (287)
T 3rku_A           29 ERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEK--L-EELKKTIDQ----------EFPNAKVHVAQLD   95 (287)
T ss_dssp             HHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHH--H-HHHHHHHHH----------HCTTCEEEEEECC
T ss_pred             hhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHH--H-HHHHHHHHh----------hCCCCeEEEEECC
Confidence            34679999999999999999999999998433489999886521  1 122211110          0012568899999


Q ss_pred             CCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHH----hcCCCC
Q psy17489        112 LESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAK----ECVNLK  172 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~  172 (177)
                      +++.      ++++.+++       ++|++|||||...        ..++|+..+++|+.++.++++++.    +. +..
T Consensus        96 v~d~------~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g  168 (287)
T 3rku_A           96 ITQA------EKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAK-NSG  168 (287)
T ss_dssp             TTCG------GGHHHHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCC
T ss_pred             CCCH------HHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCC
Confidence            9998      67777654       6899999999643        246788899999999999999874    33 456


Q ss_pred             CceeC
Q psy17489        173 RFCEL  177 (177)
Q Consensus       173 ~~v~v  177 (177)
                      +||++
T Consensus       169 ~IV~i  173 (287)
T 3rku_A          169 DIVNL  173 (287)
T ss_dssp             EEEEE
T ss_pred             eEEEE
Confidence            77764

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.63  E-value=5.8e-15  Score=111.15  Aligned_cols=121  Identities=12%  Similarity=0.151  Sum_probs=83.3

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++++.. ... +.+.+.+..            ...++.++.+|++
T Consensus         3 l~~~~vlItGasggiG~~~a~~l~~~G---~~V~~~~~r~~-~~~-~~~~~~~~~------------~~~~~~~~~~D~~   65 (247)
T 2hq1_A            3 LKGKTAIVTGSSRGLGKAIAWKLGNMG---ANIVLNGSPAS-TSL-DATAEEFKA------------AGINVVVAKGDVK   65 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEECTTC-SHH-HHHHHHHHH------------TTCCEEEEESCTT
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCC---CEEEEEcCcCH-HHH-HHHHHHHHh------------cCCcEEEEECCCC
Confidence            468999999999999999999999999   58888844321 111 222221111            1257889999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCcee
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VNLKRFCE  176 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~  176 (177)
                      +.      +.+..+++       ++|+||||||....       .+.++..+++|+.++.++++.+.+.   .+..+||+
T Consensus        66 ~~------~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~  139 (247)
T 2hq1_A           66 NP------EDVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIIN  139 (247)
T ss_dssp             SH------HHHHHHHHHHHHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred             CH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence            98      66666654       79999999997532       2456678999999999988877541   15678887


Q ss_pred             C
Q psy17489        177 L  177 (177)
Q Consensus       177 v  177 (177)
                      +
T Consensus       140 ~  140 (247)
T 2hq1_A          140 I  140 (247)
T ss_dssp             E
T ss_pred             E
Confidence            4

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.63  E-value=2.6e-15  Score=113.57  Aligned_cols=120  Identities=16%  Similarity=0.192  Sum_probs=88.8

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   ++|++++|+.      +.+.+....     +    .....++.++.+|+
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G---~~V~~~~r~~------~~~~~~~~~-----l----~~~~~~~~~~~~Dv   65 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEG---AAVAIAARRV------EKLRALGDE-----L----TAAGAKVHVLELDV   65 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHHH-----H----HHTTCCEEEEECCT
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCH------HHHHHHHHH-----H----HhcCCcEEEEECCC
Confidence            3578999999999999999999999999   6899998864      222221110     0    00124788999999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCce
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFC  175 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v  175 (177)
                      ++.      +++..+++       ++|++|||||...       ..++|+..+++|+.++.++++.+...   .+ .+||
T Consensus        66 ~~~------~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv  138 (247)
T 2jah_A           66 ADR------QGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVV  138 (247)
T ss_dssp             TCH------HHHHHHHHHHHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEE
T ss_pred             CCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEE
Confidence            998      56665543       7999999999743       23678889999999999999887542   13 5777


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       139 ~i  140 (247)
T 2jah_A          139 QM  140 (247)
T ss_dssp             EE
T ss_pred             EE
Confidence            64

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.63  E-value=2.7e-15  Score=114.27  Aligned_cols=120  Identities=20%  Similarity=0.317  Sum_probs=88.7

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +.+|+++||||+|+||.++++.|++.|   ++|++++|+...  ..+.+.+...            ....++.++.+|++
T Consensus         5 ~~~k~vlVTGas~gIG~~~a~~l~~~G---~~v~~~~~~~~~--~~~~~~~~~~------------~~~~~~~~~~~Dl~   67 (264)
T 3i4f_A            5 RFVRHALITAGTKGLGKQVTEKLLAKG---YSVTVTYHSDTT--AMETMKETYK------------DVEERLQFVQADVT   67 (264)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSCHH--HHHHHHHHTG------------GGGGGEEEEECCTT
T ss_pred             cccCEEEEeCCCchhHHHHHHHHHHCC---CEEEEEcCCChH--HHHHHHHHHH------------hcCCceEEEEecCC
Confidence            357899999999999999999999999   688888776521  1122222211            12357899999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcc--cC-------chHHHHHHHHHhHHHHHHHHHHH----HhcCCCCC
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAAS--LR-------FDEALQKAIRANLYATKQMLNLA----KECVNLKR  173 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~--~~-------~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~  173 (177)
                      +.      +++..+++       ++|++|||||.  ..       ..+.++..+++|+.++.++++.+    ++. +..+
T Consensus        68 ~~------~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~  140 (264)
T 3i4f_A           68 KK------EDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQ-NFGR  140 (264)
T ss_dssp             SH------HHHHHHHHHHHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEE
T ss_pred             CH------HHHHHHHHHHHHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-CCCe
Confidence            98      66666654       79999999993  21       24677889999999999999987    444 5567


Q ss_pred             ceeC
Q psy17489        174 FCEL  177 (177)
Q Consensus       174 ~v~v  177 (177)
                      +|++
T Consensus       141 iv~i  144 (264)
T 3i4f_A          141 IINY  144 (264)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            7763

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.63  E-value=8e-15  Score=112.95  Aligned_cols=122  Identities=15%  Similarity=0.110  Sum_probs=90.3

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   ++|++++|+...  ..+.+.+.+..            ...++.++.+|+
T Consensus        26 ~~~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~--~~~~~~~~~~~------------~~~~~~~~~~D~   88 (283)
T 1g0o_A           26 SLEGKVALVTGAGRGIGREMAMELGRRG---CKVIVNYANSTE--SAEEVVAAIKK------------NGSDAACVKANV   88 (283)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSCHH--HHHHHHHHHHH------------TTCCEEEEECCT
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCchH--HHHHHHHHHHH------------hCCCeEEEEcCC
Confidence            3678999999999999999999999999   689999886521  11111111110            125788999999


Q ss_pred             CCCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc-CCCCCceeC
Q psy17489        113 ESEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC-VNLKRFCEL  177 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~v  177 (177)
                      ++.      +++..++       .++|++|||||....       .+.|+..+++|+.++.++++++.+. .+..+||++
T Consensus        89 ~~~------~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i  162 (283)
T 1g0o_A           89 GVV------EDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILM  162 (283)
T ss_dssp             TCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred             CCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEE
Confidence            997      5555544       378999999997532       4678889999999999999998764 234577764

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.63  E-value=3.4e-16  Score=121.78  Aligned_cols=102  Identities=21%  Similarity=0.240  Sum_probs=61.2

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +|+|+||||+||||+++++.|++.|   ++|++++|+...                           ++  ++.+|+.+.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~---------------------------~~--~~~~Dl~d~   49 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNN---WHAVGCGFRRAR---------------------------PK--FEQVNLLDS   49 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTT---CEEEEEC---------------------------------------------
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCC---CeEEEEccCCCC---------------------------CC--eEEecCCCH
Confidence            5799999999999999999999998   689999885421                           12  677899987


Q ss_pred             CCCCCHHHHHHHhc--CCcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        116 HLGLSEDSEQLIKS--KVNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       116 ~~~~~~~~~~~~~~--~~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                            +.+..+++  ++|+|||+||....   ..+++.++++|+.++.+++++|.+. ++ +|||+
T Consensus        50 ------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~  108 (315)
T 2ydy_A           50 ------NAVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAV-GA-FLIYI  108 (315)
T ss_dssp             --------CHHHHHHHCCSEEEECC-------------------CHHHHHHHHHHHHH-TC-EEEEE
T ss_pred             ------HHHHHHHHhhCCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEE
Confidence                  56777776  48999999997543   3456678999999999999999987 65 88874

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.62  E-value=1.6e-15  Score=120.07  Aligned_cols=110  Identities=21%  Similarity=0.214  Sum_probs=88.9

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCC--CcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFP--DIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~--~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +|+|+||||+||||+++++.|++.|.  ..++|++++|+.....                      ....++.++.+|+.
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~----------------------~~~~~~~~~~~Dl~   58 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW----------------------HEDNPINYVQCDIS   58 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC----------------------CCSSCCEEEECCTT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc----------------------cccCceEEEEeecC
Confidence            47899999999999999999999871  1138999999764321                      01246889999999


Q ss_pred             CCCCCCCHHHHHHHhcC---CcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhc-CCCCCce
Q psy17489        114 SEHLGLSEDSEQLIKSK---VNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKEC-VNLKRFC  175 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~~---~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v  175 (177)
                      +.      +.+..++++   +|+|||+||...  .++..++++|+.++.+++++|++. +++++||
T Consensus        59 d~------~~~~~~~~~~~~~d~vih~a~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v  116 (364)
T 2v6g_A           59 DP------DDSQAKLSPLTDVTHVFYVTWANR--STEQENCEANSKMFRNVLDAVIPNCPNLKHIS  116 (364)
T ss_dssp             SH------HHHHHHHTTCTTCCEEEECCCCCC--SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEE
T ss_pred             CH------HHHHHHHhcCCCCCEEEECCCCCc--chHHHHHHHhHHHHHHHHHHHHHhccccceEE
Confidence            97      788888887   999999999764  356678899999999999999986 2678886

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.62  E-value=2.2e-15  Score=111.29  Aligned_cols=101  Identities=11%  Similarity=0.150  Sum_probs=82.8

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+|+||||+|+||+++++.|++.|   ++|++++|++      +....+                ..++.++.+|+.+. 
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g---~~V~~~~R~~------~~~~~~----------------~~~~~~~~~D~~d~-   54 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRG---HEVTAIVRNA------GKITQT----------------HKDINILQKDIFDL-   54 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCS------HHHHHH----------------CSSSEEEECCGGGC-
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCC---CEEEEEEcCc------hhhhhc----------------cCCCeEEeccccCh-
Confidence            579999999999999999999999   6999999975      222221                14688999999998 


Q ss_pred             CCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        117 LGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       117 ~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                           +.  ..++++|+|||+||....      ..+.|+.++.++++++++. +++|||++
T Consensus        55 -----~~--~~~~~~d~vi~~ag~~~~------~~~~~~~~~~~l~~a~~~~-~~~~~v~~  101 (221)
T 3ew7_A           55 -----TL--SDLSDQNVVVDAYGISPD------EAEKHVTSLDHLISVLNGT-VSPRLLVV  101 (221)
T ss_dssp             -----CH--HHHTTCSEEEECCCSSTT------TTTSHHHHHHHHHHHHCSC-CSSEEEEE
T ss_pred             -----hh--hhhcCCCEEEECCcCCcc------ccchHHHHHHHHHHHHHhc-CCceEEEE
Confidence                 34  677899999999998432      2467899999999999998 78899874

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.62  E-value=5.3e-15  Score=113.70  Aligned_cols=123  Identities=14%  Similarity=0.157  Sum_probs=90.2

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      ..+++|+++||||+|+||.++++.|++.|   ++|++.+|+...  ..+...++...            ...++.++.+|
T Consensus        23 ~~l~~k~~lVTGas~GIG~aia~~l~~~G---~~V~~~~r~~~~--~~~~~~~~~~~------------~~~~~~~~~~D   85 (277)
T 4fc7_A           23 DLLRDKVAFITGGGSGIGFRIAEIFMRHG---CHTVIASRSLPR--VLTAARKLAGA------------TGRRCLPLSMD   85 (277)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHTTT---CEEEEEESCHHH--HHHHHHHHHHH------------HSSCEEEEECC
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHH--HHHHHHHHHHh------------cCCcEEEEEcC
Confidence            34789999999999999999999999999   689999987421  11111111110            13578999999


Q ss_pred             CCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCc
Q psy17489        112 LESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRF  174 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~  174 (177)
                      +++.      +++..+++       ++|++|||||...       ..+.|+..+++|+.++.++++++...   .+..+|
T Consensus        86 v~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~i  159 (277)
T 4fc7_A           86 VRAP------PAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVI  159 (277)
T ss_dssp             TTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEE
T ss_pred             CCCH------HHHHHHHHHHHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEE
Confidence            9998      56666554       7999999999643       24678889999999999999987432   133566


Q ss_pred             eeC
Q psy17489        175 CEL  177 (177)
Q Consensus       175 v~v  177 (177)
                      |++
T Consensus       160 v~i  162 (277)
T 4fc7_A          160 VNI  162 (277)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            653

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.62  E-value=4.2e-15  Score=111.74  Aligned_cols=106  Identities=19%  Similarity=0.269  Sum_probs=81.9

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      .+|+++||||+|+||.++++.|++.|   ++|++++|+.      +.+.+....            ...++.++.+|+++
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G---~~V~~~~r~~------~~~~~~~~~------------~~~~~~~~~~D~~~   60 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERG---HQVSMMGRRY------QRLQQQELL------------LGNAVIGIVADLAH   60 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHHH------------HGGGEEEEECCTTS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCH------HHHHHHHHH------------hcCCceEEECCCCC
Confidence            47899999999999999999999999   6899999864      222222111            01258899999999


Q ss_pred             CCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        115 EHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      .      ++++.+++       ++|++|||||...       ..+.|+..+++|+.++.++++.+..
T Consensus        61 ~------~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  121 (235)
T 3l6e_A           61 H------EDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVR  121 (235)
T ss_dssp             H------HHHHHHHHHHHHHHCSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             H------HHHHHHHHHHHHhcCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            8      56665544       6899999999753       2467888999999999999998854

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.62  E-value=4e-15  Score=113.15  Aligned_cols=120  Identities=12%  Similarity=0.142  Sum_probs=88.4

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +|+++||||+|+||.++++.|++.|   ++|++++|+...... +.+.+.+.            ....++.++.+|+++.
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~-~~~~~~~~------------~~~~~~~~~~~Dv~~~   65 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADG---FDIAVADLPQQEEQA-AETIKLIE------------AADQKAVFVGLDVTDK   65 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHT---CEEEEEECGGGHHHH-HHHHHHHH------------TTTCCEEEEECCTTCH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCcchHHH-HHHHHHHH------------hcCCcEEEEEccCCCH
Confidence            6899999999999999999999999   689999987532001 11111111            0125788999999998


Q ss_pred             CCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCC-CCceeC
Q psy17489        116 HLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNL-KRFCEL  177 (177)
Q Consensus       116 ~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~-~~~v~v  177 (177)
                            +++..+++       ++|++|||||...       ..+.|+..+++|+.++.++++.+.+.   .+. .+||++
T Consensus        66 ------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~i  139 (258)
T 3a28_C           66 ------ANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINA  139 (258)
T ss_dssp             ------HHHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEE
T ss_pred             ------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence                  56666554       7999999999753       23678889999999999999887652   144 677764

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.62  E-value=3.9e-15  Score=114.26  Aligned_cols=122  Identities=14%  Similarity=0.196  Sum_probs=87.5

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|+.      +.+.+....     +.. ......++.++.+|++
T Consensus         4 ~~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~------~~~~~~~~~-----~~~-~~~~~~~~~~~~~D~~   68 (278)
T 1spx_A            4 FAEKVAIITGSSNGIGRATAVLFAREG---AKVTITGRHA------ERLEETRQQ-----ILA-AGVSEQNVNSVVADVT   68 (278)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHHH-----HHH-TTCCGGGEEEEECCTT
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCH------HHHHHHHHH-----HHh-cccCCCceeEEecccC
Confidence            568999999999999999999999999   6899999864      222221111     000 0001246889999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-----------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCC
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-----------FDEALQKAIRANLYATKQMLNLAKEC---VNLK  172 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-----------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~  172 (177)
                      +.      +++..+++       ++|++|||||...           ..+.|+..+++|+.++.++++.+.+.   .+ .
T Consensus        69 ~~------~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g  141 (278)
T 1spx_A           69 TD------AGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-G  141 (278)
T ss_dssp             SH------HHHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-C
Confidence            98      66766655       8999999999743           34567788999999999999987653   13 6


Q ss_pred             CceeC
Q psy17489        173 RFCEL  177 (177)
Q Consensus       173 ~~v~v  177 (177)
                      +||++
T Consensus       142 ~iv~i  146 (278)
T 1spx_A          142 EIVNI  146 (278)
T ss_dssp             EEEEE
T ss_pred             eEEEE
Confidence            77764

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.62  E-value=3.8e-15  Score=113.55  Aligned_cols=121  Identities=14%  Similarity=0.117  Sum_probs=89.4

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   ++|++++|+...  . +.+.+.+.            ....++.++.+|+
T Consensus        26 ~l~~k~vlITGas~gIG~~la~~l~~~G---~~V~~~~r~~~~--~-~~~~~~~~------------~~~~~~~~~~~D~   87 (262)
T 3rkr_A           26 SLSGQVAVVTGASRGIGAAIARKLGSLG---ARVVLTARDVEK--L-RAVEREIV------------AAGGEAESHACDL   87 (262)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESCHHH--H-HHHHHHHH------------HTTCEEEEEECCT
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEECCHHH--H-HHHHHHHH------------HhCCceeEEEecC
Confidence            3678999999999999999999999999   689999986521  1 11111111            1235788999999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCc
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRF  174 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~  174 (177)
                      ++.      +++..+++       ++|+||||||...        ..+.++..+++|+.++.++++.+...   .+..+|
T Consensus        88 ~~~------~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~i  161 (262)
T 3rkr_A           88 SHS------DAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHI  161 (262)
T ss_dssp             TCH------HHHHHHHHHHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             CCH------HHHHHHHHHHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceE
Confidence            998      56665543       6899999999721        24677889999999999999886541   155677


Q ss_pred             eeC
Q psy17489        175 CEL  177 (177)
Q Consensus       175 v~v  177 (177)
                      |++
T Consensus       162 v~i  164 (262)
T 3rkr_A          162 INI  164 (262)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            764

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.62  E-value=1.4e-15  Score=120.39  Aligned_cols=117  Identities=18%  Similarity=0.301  Sum_probs=89.1

Q ss_pred             ceEEEecCCcchHHHHHHHHHhh-CCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRS-FPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~-g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      |+|+||||+||||+++++.|++. |   ++|++++|....... +.+.         .+    . ...++.++.+|+++.
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g---~~V~~~~r~~~~~~~-~~~~---------~~----~-~~~~~~~~~~Dl~d~   62 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQ---DTVVNIDKLTYAGNL-ESLS---------DI----S-ESNRYNFEHADICDS   62 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCS---CEEEEEECCCTTCCG-GGGT---------TT----T-TCTTEEEEECCTTCH
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCC---CeEEEEecCCCCCch-hhhh---------hh----h-cCCCeEEEECCCCCH
Confidence            47999999999999999999998 6   589999986522111 0010         00    0 124789999999998


Q ss_pred             CCCCCHHHHHHHhc--CCcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhc-CCCC-------CceeC
Q psy17489        116 HLGLSEDSEQLIKS--KVNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKEC-VNLK-------RFCEL  177 (177)
Q Consensus       116 ~~~~~~~~~~~~~~--~~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~-------~~v~v  177 (177)
                            +.+..+++  ++|+|||+||....   ..+++.++++|+.++.+++++|.+. .+++       +|||+
T Consensus        63 ------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~  131 (361)
T 1kew_A           63 ------AEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHI  131 (361)
T ss_dssp             ------HHHHHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEE
T ss_pred             ------HHHHHHHhhcCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEe
Confidence                  78888887  89999999998653   2345678999999999999999875 1455       88874

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.62  E-value=2.8e-15  Score=114.16  Aligned_cols=120  Identities=18%  Similarity=0.111  Sum_probs=86.7

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEE-EeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM-VRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .++|+++||||+|+||.++++.|++.|   ++|++. +|+...  . +.+.+.+.            ....++.++.+|+
T Consensus         2 ~~~k~vlVTGas~gIG~aia~~l~~~G---~~vv~~~~r~~~~--~-~~~~~~~~------------~~~~~~~~~~~Dv   63 (258)
T 3oid_A            2 EQNKCALVTGSSRGVGKAAAIRLAENG---YNIVINYARSKKA--A-LETAEEIE------------KLGVKVLVVKANV   63 (258)
T ss_dssp             -CCCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESSCHHH--H-HHHHHHHH------------TTTCCEEEEECCT
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHHCC---CEEEEEcCCCHHH--H-HHHHHHHH------------hcCCcEEEEEcCC
Confidence            468999999999999999999999999   577776 554311  1 11221111            1235789999999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCce
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFC  175 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v  175 (177)
                      ++.      ++++.+++       ++|++|||||...       ..+.|+..+++|+.++.++++.+...   .+..+||
T Consensus        64 ~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv  137 (258)
T 3oid_A           64 GQP------AKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIV  137 (258)
T ss_dssp             TCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred             CCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEE
Confidence            998      56666543       6799999999643       24678889999999999999887432   1455777


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       138 ~i  139 (258)
T 3oid_A          138 SI  139 (258)
T ss_dssp             EE
T ss_pred             EE
Confidence            64

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.62  E-value=3.6e-15  Score=113.35  Aligned_cols=108  Identities=15%  Similarity=0.178  Sum_probs=84.7

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   .+|++++|+.      +.+.+....            ...++.++.+|+
T Consensus         6 ~l~~k~vlITGas~gIG~~~a~~l~~~G---~~V~~~~r~~------~~~~~~~~~------------~~~~~~~~~~D~   64 (261)
T 3n74_A            6 SLEGKVALITGAGSGFGEGMAKRFAKGG---AKVVIVDRDK------AGAERVAGE------------IGDAALAVAADI   64 (261)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHHH------------HCTTEEEEECCT
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEcCCH------HHHHHHHHH------------hCCceEEEEecC
Confidence            3578999999999999999999999999   6899999865      222222221            125788999999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      ++.      +++..+++       ++|++|||||...        ..+.++..+++|+.++.++++.+..
T Consensus        65 ~~~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  128 (261)
T 3n74_A           65 SKE------ADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIP  128 (261)
T ss_dssp             TSH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCH------HHHHHHHHHHHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            998      66666554       7899999999753        2467788899999999999888754

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.62  E-value=5.7e-15  Score=112.56  Aligned_cols=121  Identities=16%  Similarity=0.194  Sum_probs=88.9

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   ++|++++|+...  . +.+.+.+.            ....++.++.+|+
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~--~-~~~~~~~~------------~~~~~~~~~~~D~   65 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEG---TAIALLDMNREA--L-EKAEASVR------------EKGVEARSYVCDV   65 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH--H-HHHHHHHH------------TTTSCEEEEECCT
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHH------------hcCCcEEEEEecC
Confidence            3578999999999999999999999999   689999886421  1 11111111            1124688999999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCccc-C-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCc
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASL-R-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRF  174 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~-~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~  174 (177)
                      ++.      +++..+++       ++|++|||||.. .       ..+.|+..+++|+.++.++++.+.+.   .+..+|
T Consensus        66 ~~~------~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~i  139 (262)
T 1zem_A           66 TSE------EAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRI  139 (262)
T ss_dssp             TCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred             CCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEE
Confidence            997      56655543       799999999965 2       24678889999999999999887642   144577


Q ss_pred             eeC
Q psy17489        175 CEL  177 (177)
Q Consensus       175 v~v  177 (177)
                      |++
T Consensus       140 v~i  142 (262)
T 1zem_A          140 VNT  142 (262)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            764

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.62  E-value=5.2e-15  Score=113.76  Aligned_cols=120  Identities=15%  Similarity=0.158  Sum_probs=89.1

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|+...  . +.+.+.+..            ...++.++.+|++
T Consensus        20 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~--~-~~~~~~l~~------------~~~~~~~~~~Dv~   81 (277)
T 2rhc_B           20 QDSEVALVTGATSGIGLEIARRLGKEG---LRVFVCARGEEG--L-RTTLKELRE------------AGVEADGRTCDVR   81 (277)
T ss_dssp             TTSCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESCHHH--H-HHHHHHHHH------------TTCCEEEEECCTT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHHh------------cCCceEEEECCCC
Confidence            578999999999999999999999999   689999986421  1 111111110            1246888999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc-----CCCCCc
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC-----VNLKRF  174 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~-----~~~~~~  174 (177)
                      +.      +++..+++       ++|+||||||...       ..+.|+..+++|+.++.++++.+.+.     .+..+|
T Consensus        82 ~~------~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~i  155 (277)
T 2rhc_B           82 SV------PEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRI  155 (277)
T ss_dssp             CH------HHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEE
T ss_pred             CH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEE
Confidence            98      66666554       7999999999743       13567889999999999999987653     134677


Q ss_pred             eeC
Q psy17489        175 CEL  177 (177)
Q Consensus       175 v~v  177 (177)
                      |++
T Consensus       156 v~i  158 (277)
T 2rhc_B          156 VNI  158 (277)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            764

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.62  E-value=2.4e-15  Score=128.35  Aligned_cols=115  Identities=14%  Similarity=0.233  Sum_probs=90.7

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhh-CCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRS-FPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS  110 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~-g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  110 (177)
                      .+.++|+|+||||+||||+++++.|++. |   ++|++++|+.....      +         +   .  ...++.++.+
T Consensus       311 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~g---~~V~~~~r~~~~~~------~---------~---~--~~~~v~~v~~  367 (660)
T 1z7e_A          311 TARRRTRVLILGVNGFIGNHLTERLLREDH---YEVYGLDIGSDAIS------R---------F---L--NHPHFHFVEG  367 (660)
T ss_dssp             ---CCEEEEEETTTSHHHHHHHHHHHHSSS---EEEEEEESCCTTTG------G---------G---T--TCTTEEEEEC
T ss_pred             hhccCceEEEEcCCcHHHHHHHHHHHhcCC---CEEEEEEcCchhhh------h---------h---c--cCCceEEEEC
Confidence            3457889999999999999999999997 7   58999999763210      0         0   0  1257889999


Q ss_pred             CCCCCCCCCCHHH-HHHHhcCCcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        111 NLESEHLGLSEDS-EQLIKSKVNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       111 D~~~~~~~~~~~~-~~~~~~~~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      |+++.      ++ +..+++++|+|||+||....   ..++..++++|+.++.+++++|.+. + +||||+
T Consensus       368 Dl~d~------~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-~-~r~V~~  430 (660)
T 1z7e_A          368 DISIH------SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRIIFP  430 (660)
T ss_dssp             CTTTC------HHHHHHHHHHCSEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEE
T ss_pred             CCCCc------HHHHHHhhcCCCEEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHh-C-CEEEEE
Confidence            99987      44 67778899999999997653   3456678999999999999999998 6 899984

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.62  E-value=6e-15  Score=113.16  Aligned_cols=119  Identities=18%  Similarity=0.223  Sum_probs=89.4

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|+..      .+.+....     +    .....++.++.+|++
T Consensus        19 l~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~------~~~~~~~~-----~----~~~~~~~~~~~~D~~   80 (273)
T 1ae1_A           19 LKGTTALVTGGSKGIGYAIVEELAGLG---ARVYTCSRNEK------ELDECLEI-----W----REKGLNVEGSVCDLL   80 (273)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCHH------HHHHHHHH-----H----HHTTCCEEEEECCTT
T ss_pred             CCCCEEEEECCcchHHHHHHHHHHHCC---CEEEEEeCCHH------HHHHHHHH-----H----HhcCCceEEEECCCC
Confidence            678999999999999999999999999   68999998642      22211110     0    001246889999999


Q ss_pred             CCCCCCCHHHHHHHh--------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCc
Q psy17489        114 SEHLGLSEDSEQLIK--------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAK----ECVNLKRF  174 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~--------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~  174 (177)
                      +.      +++..++        .++|++|||||...       ..++|+..+++|+.++.++++++.    +. +..+|
T Consensus        81 ~~------~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~i  153 (273)
T 1ae1_A           81 SR------TERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKAS-QNGNV  153 (273)
T ss_dssp             CH------HHHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TSEEE
T ss_pred             CH------HHHHHHHHHHHHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEE
Confidence            98      5666654        57999999999753       246788899999999999999874    33 45677


Q ss_pred             eeC
Q psy17489        175 CEL  177 (177)
Q Consensus       175 v~v  177 (177)
                      |++
T Consensus       154 v~i  156 (273)
T 1ae1_A          154 IFL  156 (273)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            764

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.62  E-value=2.2e-14  Score=110.10  Aligned_cols=123  Identities=10%  Similarity=0.086  Sum_probs=91.2

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCC-Ch---HHHHHHHHhhhhhhcccccCcccCCCeEEEe
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGS-SP---EERVKNMLNSVIFDRLNKEVPDFRSKIQVIP  109 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  109 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++.+|+.... ..   .+...+....            ...++.++.
T Consensus         4 l~~k~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~   68 (274)
T 3e03_A            4 LSGKTLFITGASRGIGLAIALRAARDG---ANVAIAAKSAVANPKLPGTIHSAAAAVNA------------AGGQGLALK   68 (274)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCCSCCTTSCCCHHHHHHHHHH------------HTSEEEEEE
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCC---CEEEEEeccchhhhhhHHHHHHHHHHHHh------------cCCeEEEEe
Confidence            578999999999999999999999999   6899999986431 11   1112211111            235788999


Q ss_pred             CCCCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCC
Q psy17489        110 SNLESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLK  172 (177)
Q Consensus       110 ~D~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~  172 (177)
                      +|+++.      +++..+++       ++|++|||||...       ..+.|+..+++|+.++.++.+.+...   .+..
T Consensus        69 ~Dv~~~------~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g  142 (274)
T 3e03_A           69 CDIREE------DQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNP  142 (274)
T ss_dssp             CCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSC
T ss_pred             CCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCc
Confidence            999998      66666543       7899999999743       24678889999999999999987542   1445


Q ss_pred             CceeC
Q psy17489        173 RFCEL  177 (177)
Q Consensus       173 ~~v~v  177 (177)
                      ++|++
T Consensus       143 ~iv~i  147 (274)
T 3e03_A          143 HILTL  147 (274)
T ss_dssp             EEEEC
T ss_pred             eEEEE
Confidence            77764

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.62  E-value=7.7e-15  Score=111.13  Aligned_cols=109  Identities=9%  Similarity=0.075  Sum_probs=87.3

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|+....                        . ..+.++.+|++
T Consensus         5 l~~k~vlVTGas~giG~~ia~~l~~~G---~~V~~~~r~~~~~------------------------~-~~~~~~~~D~~   56 (250)
T 2fwm_X            5 FSGKNVWVTGAGKGIGYATALAFVEAG---AKVTGFDQAFTQE------------------------Q-YPFATEVMDVA   56 (250)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCCCSS------------------------C-CSSEEEECCTT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCchhhh------------------------c-CCceEEEcCCC
Confidence            568999999999999999999999999   6899999875311                        0 12778899999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHH----HhcCCCCCce
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLA----KECVNLKRFC  175 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v  175 (177)
                      +.      +++..+++       ++|++|||||...       ..+.|+..+++|+.++.++++++    ++. +..+||
T Consensus        57 d~------~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~iv  129 (250)
T 2fwm_X           57 DA------AQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQ-RGGAIV  129 (250)
T ss_dssp             CH------HHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEE
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhc-CCCEEE
Confidence            98      66766654       7999999999743       24678889999999999999987    344 556777


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       130 ~i  131 (250)
T 2fwm_X          130 TV  131 (250)
T ss_dssp             EE
T ss_pred             EE
Confidence            64

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.62  E-value=5.2e-15  Score=111.78  Aligned_cols=120  Identities=13%  Similarity=0.215  Sum_probs=87.6

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|+..     +...+....     +    .....++.++.+|++
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G---~~V~~~~r~~~-----~~~~~~~~~-----~----~~~~~~~~~~~~D~~   64 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQG---ANVVVNYAGNE-----QKANEVVDE-----I----KKLGSDAIAVRADVA   64 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCH-----HHHHHHHHH-----H----HHTTCCEEEEECCTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCCH-----HHHHHHHHH-----H----HhcCCcEEEEEcCCC
Confidence            468999999999999999999999999   68998888321     122211110     0    001246889999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCce
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAK----ECVNLKRFC  175 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v  175 (177)
                      +.      +++..+++       ++|++|||||...       ..+.|+..+++|+.++.++.+.+.    +. +..+||
T Consensus        65 ~~------~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv  137 (246)
T 2uvd_A           65 NA------EDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQ-RHGRIV  137 (246)
T ss_dssp             CH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEE
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEE
Confidence            98      66666554       7999999999753       236788899999999888877664    33 556787


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       138 ~i  139 (246)
T 2uvd_A          138 NI  139 (246)
T ss_dssp             EE
T ss_pred             EE
Confidence            64

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.62  E-value=4.1e-15  Score=113.50  Aligned_cols=115  Identities=11%  Similarity=0.150  Sum_probs=86.6

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|+...  ..+.+.+                  .++.++.+|++
T Consensus        25 l~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~--~~~~~~~------------------~~~~~~~~Dv~   81 (260)
T 3gem_A           25 LSSAPILITGASQRVGLHCALRLLEHG---HRVIISYRTEHA--SVTELRQ------------------AGAVALYGDFS   81 (260)
T ss_dssp             --CCCEEESSTTSHHHHHHHHHHHHTT---CCEEEEESSCCH--HHHHHHH------------------HTCEEEECCTT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCChHH--HHHHHHh------------------cCCeEEECCCC
Confidence            678999999999999999999999999   689999997632  1122221                  24788999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCceeC
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFCEL  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~v  177 (177)
                      +.      +++..+++       ++|++|||||...      ..+.|+..+++|+.++.++++.+...   .+..++|++
T Consensus        82 ~~------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~i  155 (260)
T 3gem_A           82 CE------TGIMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHI  155 (260)
T ss_dssp             SH------HHHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEE
T ss_pred             CH------HHHHHHHHHHHHhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEE
Confidence            98      66666554       6899999999753      13567789999999999999887542   245677764

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.62  E-value=5.4e-15  Score=116.02  Aligned_cols=115  Identities=15%  Similarity=0.151  Sum_probs=86.4

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC-------CCCChHHHHHHHHhhhhhhcccccCcccCCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK-------KGSSPEERVKNMLNSVIFDRLNKEVPDFRSK  104 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ..+++|+++||||+|+||.++++.|++.|   ++|++++|+.       ......+.+.+.+..            ...+
T Consensus        23 ~~l~gk~vlVTGas~GIG~aia~~la~~G---~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~   87 (322)
T 3qlj_A           23 GVVDGRVVIVTGAGGGIGRAHALAFAAEG---ARVVVNDIGVGLDGSPASGGSAAQSVVDEITA------------AGGE   87 (322)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEECCCBCTTSSBTCTTSHHHHHHHHHHH------------TTCE
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCcccccccccccHHHHHHHHHHHHh------------cCCc
Confidence            44689999999999999999999999999   6999988861       111222222222211            2356


Q ss_pred             eEEEeCCCCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        105 IQVIPSNLESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       105 v~~~~~D~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      +.++.+|+++.      +++..+++       ++|++|||||...       ..+.|+..+++|+.++.++++++..
T Consensus        88 ~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~  158 (322)
T 3qlj_A           88 AVADGSNVADW------DQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAA  158 (322)
T ss_dssp             EEEECCCTTSH------HHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            88899999998      66666554       7999999999753       2467888999999999999998754

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.62  E-value=8.6e-15  Score=112.60  Aligned_cols=111  Identities=14%  Similarity=0.121  Sum_probs=86.9

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   ++|++.+|+...  . +.+.+.+..            ...++.++.+|+
T Consensus        29 ~l~gk~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~--~-~~~~~~~~~------------~~~~~~~~~~Dl   90 (276)
T 3r1i_A           29 DLSGKRALITGASTGIGKKVALAYAEAG---AQVAVAARHSDA--L-QVVADEIAG------------VGGKALPIRCDV   90 (276)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESSGGG--G-HHHHHHHHH------------TTCCCEEEECCT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHHh------------cCCeEEEEEcCC
Confidence            4688999999999999999999999999   689999997532  2 222222111            235788999999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      ++.      ++++.+++       ++|++|||||....       .+.|+..+++|+.++.++++++.+
T Consensus        91 ~d~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  153 (276)
T 3r1i_A           91 TQP------DQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAAR  153 (276)
T ss_dssp             TCH------HHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            998      66666654       79999999997542       467888999999999999988754

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.62  E-value=8.8e-15  Score=112.27  Aligned_cols=122  Identities=12%  Similarity=0.127  Sum_probs=90.4

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   ++|++.+++...  ..+.+.+.+.            ....++.++.+|+
T Consensus        28 ~l~gk~~lVTGas~GIG~aia~~la~~G---~~V~~~~~~~~~--~~~~~~~~l~------------~~~~~~~~~~~Dv   90 (271)
T 3v2g_A           28 SLAGKTAFVTGGSRGIGAAIAKRLALEG---AAVALTYVNAAE--RAQAVVSEIE------------QAGGRAVAIRADN   90 (271)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCHH--HHHHHHHHHH------------HTTCCEEEEECCT
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCCHH--HHHHHHHHHH------------hcCCcEEEEECCC
Confidence            4689999999999999999999999999   688888765421  1112222111            1235788999999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc-CCCCCceeC
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC-VNLKRFCEL  177 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~v  177 (177)
                      ++.      ++++.+++       ++|++|||||...       ..++|+..+++|+.++.++++++... .+..++|++
T Consensus        91 ~d~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~i  164 (271)
T 3v2g_A           91 RDA------EAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITI  164 (271)
T ss_dssp             TCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred             CCH------HHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEE
Confidence            998      66666554       7999999999753       24678889999999999999998764 223466653

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.62  E-value=2e-15  Score=118.97  Aligned_cols=117  Identities=24%  Similarity=0.263  Sum_probs=84.7

Q ss_pred             cccccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEE
Q psy17489         29 KVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVI  108 (177)
Q Consensus        29 ~~~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  108 (177)
                      +....+++|+|+||||+||||+++++.|++.|   ++|++++|......  ..+..         +    . ...++.++
T Consensus        20 ~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~--~~~~~---------~----~-~~~~~~~~   80 (343)
T 2b69_A           20 QGHMEKDRKRILITGGAGFVGSHLTDKLMMDG---HEVTVVDNFFTGRK--RNVEH---------W----I-GHENFELI   80 (343)
T ss_dssp             -------CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCG--GGTGG---------G----T-TCTTEEEE
T ss_pred             ccccccCCCEEEEEcCccHHHHHHHHHHHHCC---CEEEEEeCCCccch--hhhhh---------h----c-cCCceEEE
Confidence            44455678999999999999999999999998   58999998653211  00000         0    0 12468899


Q ss_pred             eCCCCCCCCCCCHHHHHHHhcCCcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        109 PSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       109 ~~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      .+|+.+..           +.++|+|||+||....   ..++...+++|+.++.+++++|++. ++ ||||+
T Consensus        81 ~~D~~~~~-----------~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~  139 (343)
T 2b69_A           81 NHDVVEPL-----------YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV-GA-RLLLA  139 (343)
T ss_dssp             ECCTTSCC-----------CCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHH-TC-EEEEE
T ss_pred             eCccCChh-----------hcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CC-cEEEE
Confidence            99998862           4579999999997653   2345678899999999999999988 65 88874

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.62  E-value=4.6e-15  Score=114.29  Aligned_cols=113  Identities=17%  Similarity=0.112  Sum_probs=83.1

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      ..+++|+++||||+|+||.++++.|++.|   ++|++++|+.. ... +.+.+.+.            ....++.++.+|
T Consensus        25 ~~~~~k~~lVTGas~GIG~aia~~la~~G---~~V~~~~~~~~-~~~-~~~~~~~~------------~~~~~~~~~~~D   87 (280)
T 4da9_A           25 TQKARPVAIVTGGRRGIGLGIARALAASG---FDIAITGIGDA-EGV-APVIAELS------------GLGARVIFLRAD   87 (280)
T ss_dssp             SCCCCCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCCH-HHH-HHHHHHHH------------HTTCCEEEEECC
T ss_pred             hccCCCEEEEecCCCHHHHHHHHHHHHCC---CeEEEEeCCCH-HHH-HHHHHHHH------------hcCCcEEEEEec
Confidence            34678999999999999999999999999   68998886432 111 11111111            123578999999


Q ss_pred             CCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC---------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        112 LESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR---------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~---------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      +++.      +++..+++       ++|++|||||...         ..+.|+..+++|+.++.++++.+..
T Consensus        88 v~d~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  153 (280)
T 4da9_A           88 LADL------SSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLK  153 (280)
T ss_dssp             TTSG------GGHHHHHHHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHH
T ss_pred             CCCH------HHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            9998      55555544       7999999999731         2467888999999999999888754

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.62  E-value=1e-14  Score=111.13  Aligned_cols=117  Identities=13%  Similarity=0.082  Sum_probs=88.4

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|+.      +........            ...++.++.+|++
T Consensus        10 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~------~~~~~~~~~------------~~~~~~~~~~D~~   68 (263)
T 3ak4_A           10 LSGRKAIVTGGSKGIGAAIARALDKAG---ATVAIADLDV------MAAQAVVAG------------LENGGFAVEVDVT   68 (263)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHHT------------CTTCCEEEECCTT
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCH------HHHHHHHHH------------HhcCCeEEEEeCC
Confidence            568999999999999999999999999   6899998864      222222111            1125788999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CC-CCCce
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VN-LKRFC  175 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~-~~~~v  175 (177)
                      +.      +++..+++       ++|+||||||...       ..+.|+..+++|+.++.++++++.+.   .+ ..+||
T Consensus        69 d~------~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv  142 (263)
T 3ak4_A           69 KR------ASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIV  142 (263)
T ss_dssp             CH------HHHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEE
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEE
Confidence            98      66766655       7999999999753       13578889999999999998887542   13 46777


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       143 ~i  144 (263)
T 3ak4_A          143 NT  144 (263)
T ss_dssp             EE
T ss_pred             Ee
Confidence            63

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.62  E-value=1.1e-14  Score=112.27  Aligned_cols=129  Identities=15%  Similarity=0.051  Sum_probs=92.8

Q ss_pred             cccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCC----------CChHHHHHHHHhhhhhhcccccCcc
Q psy17489         31 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG----------SSPEERVKNMLNSVIFDRLNKEVPD  100 (177)
Q Consensus        31 ~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~  100 (177)
                      ...+++|+++||||+|+||.++++.|++.|   ++|++++|++..          .+..+.+.+....         ...
T Consensus         6 ~~~l~~k~~lVTGas~gIG~aia~~la~~G---~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~   73 (286)
T 3uve_A            6 TGRVEGKVAFVTGAARGQGRSHAVRLAQEG---ADIIAVDICKPIRAGVVDTAIPASTPEDLAETADL---------VKG   73 (286)
T ss_dssp             CCTTTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHH---------HHT
T ss_pred             CcccCCCEEEEeCCCchHHHHHHHHHHHCC---CeEEEEeccccccccccccccccCCHHHHHHHHHH---------Hhh
Confidence            345789999999999999999999999999   689999886321          1112333332221         011


Q ss_pred             cCCCeEEEeCCCCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHH
Q psy17489        101 FRSKIQVIPSNLESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLA  165 (177)
Q Consensus       101 ~~~~v~~~~~D~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~  165 (177)
                      ...++.++.+|+++.      +++..+++       ++|++|||||...        ..+.|+..+++|+.++.++++++
T Consensus        74 ~~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~  147 (286)
T 3uve_A           74 HNRRIVTAEVDVRDY------DALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAG  147 (286)
T ss_dssp             TTCCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             cCCceEEEEcCCCCH------HHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHH
Confidence            235789999999998      66666554       7999999999743        14678889999999999999987


Q ss_pred             Hhc----CCCCCceeC
Q psy17489        166 KEC----VNLKRFCEL  177 (177)
Q Consensus       166 ~~~----~~~~~~v~v  177 (177)
                      ...    +...++|++
T Consensus       148 ~~~~~~~~~~g~iv~i  163 (286)
T 3uve_A          148 VPHMIAGGRGGSIILT  163 (286)
T ss_dssp             HHHHHHHTSCEEEEEE
T ss_pred             HHHHHhCCCCcEEEEE
Confidence            542    123466653

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.61  E-value=1.1e-14  Score=109.60  Aligned_cols=116  Identities=16%  Similarity=0.214  Sum_probs=88.5

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|+.      +.+.+....             ..++.++.+|++
T Consensus         5 l~~k~vlITGasggiG~~~a~~l~~~G---~~V~~~~r~~------~~~~~~~~~-------------~~~~~~~~~D~~   62 (244)
T 3d3w_A            5 LAGRRVLVTGAGKGIGRGTVQALHATG---ARVVAVSRTQ------ADLDSLVRE-------------CPGIEPVCVDLG   62 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHHH-------------STTCEEEECCTT
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCH------HHHHHHHHH-------------cCCCCEEEEeCC
Confidence            578999999999999999999999999   5899998864      222222111             124667899999


Q ss_pred             CCCCCCCHHHHHHHhc---CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CC-CCCceeC
Q psy17489        114 SEHLGLSEDSEQLIKS---KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VN-LKRFCEL  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~---~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~-~~~~v~v  177 (177)
                      +.      +++..+++   ++|+|||+||....       .+.++..+++|+.++.++++.+.+.   .+ ..+||++
T Consensus        63 ~~------~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~  134 (244)
T 3d3w_A           63 DW------EATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNV  134 (244)
T ss_dssp             CH------HHHHHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred             CH------HHHHHHHHHcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEe
Confidence            98      77888775   58999999997532       3567889999999999998887652   13 5677764

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.61  E-value=7.4e-15  Score=109.87  Aligned_cols=114  Identities=15%  Similarity=0.134  Sum_probs=85.6

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      .+|+++||||+|+||+++++.|++.|   ++|++++|+.      +.+.+....             ..++.++.+|+++
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G---~~V~~~~r~~------~~~~~~~~~-------------~~~~~~~~~D~~~   61 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKG---YRVGLMARDE------KRLQALAAE-------------LEGALPLPGDVRE   61 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHHH-------------STTCEEEECCTTC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEECCH------HHHHHHHHH-------------hhhceEEEecCCC
Confidence            36789999999999999999999999   5899998864      222222111             1267889999999


Q ss_pred             CCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHH----HhcCCCCCcee
Q psy17489        115 EHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLA----KECVNLKRFCE  176 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~  176 (177)
                      .      +++..+++       ++|++||+||...       ..++++..+++|+.++.++++.+    ++. +.++||+
T Consensus        62 ~------~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~~~iv~  134 (234)
T 2ehd_A           62 E------GDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRR-GGGTIVN  134 (234)
T ss_dssp             H------HHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-TCEEEEE
T ss_pred             H------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCcEEEE
Confidence            7      56665543       7899999999643       24667889999999998776654    444 5678887


Q ss_pred             C
Q psy17489        177 L  177 (177)
Q Consensus       177 v  177 (177)
                      +
T Consensus       135 i  135 (234)
T 2ehd_A          135 V  135 (234)
T ss_dssp             E
T ss_pred             E
Confidence            4

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.61  E-value=1e-14  Score=111.44  Aligned_cols=121  Identities=15%  Similarity=0.154  Sum_probs=87.7

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|+...  . +.+.+.+..          .....++.++.+|++
T Consensus        11 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~--~-~~~~~~~~~----------~~~~~~~~~~~~D~~   74 (267)
T 1iy8_A           11 FTDRVVLITGGGSGLGRATAVRLAAEG---AKLSLVDVSSEG--L-EASKAAVLE----------TAPDAEVLTTVADVS   74 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH--H-HHHHHHHHH----------HCTTCCEEEEECCTT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHHh----------hcCCceEEEEEccCC
Confidence            578999999999999999999999999   689999986421  1 111111110          001256889999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc--------hHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCc
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF--------DEALQKAIRANLYATKQMLNLAK----ECVNLKRF  174 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~--------~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~  174 (177)
                      +.      +++..+++       ++|++|||||....        .+.|+..+++|+.++.++.+.+.    +. +..+|
T Consensus        75 ~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~i  147 (267)
T 1iy8_A           75 DE------AQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQ-GSGMV  147 (267)
T ss_dssp             SH------HHHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEE
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEE
Confidence            98      66666554       78999999996432        36788899999999987766653    34 55677


Q ss_pred             eeC
Q psy17489        175 CEL  177 (177)
Q Consensus       175 v~v  177 (177)
                      |++
T Consensus       148 v~i  150 (267)
T 1iy8_A          148 VNT  150 (267)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            764

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.61  E-value=3.4e-15  Score=114.58  Aligned_cols=121  Identities=17%  Similarity=0.150  Sum_probs=90.0

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   ++|++.+|+..      .+.+....         ......++.++.+|+
T Consensus        23 ~l~gk~~lVTGas~gIG~aia~~la~~G---~~V~~~~r~~~------~~~~~~~~---------l~~~~~~~~~~~~Dv   84 (271)
T 4ibo_A           23 DLGGRTALVTGSSRGLGRAMAEGLAVAG---ARILINGTDPS------RVAQTVQE---------FRNVGHDAEAVAFDV   84 (271)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEECCSCHH------HHHHHHHH---------HHHTTCCEEECCCCT
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHH------HHHHHHHH---------HHhcCCceEEEEcCC
Confidence            4689999999999999999999999999   68998888642      22221111         001235788999999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCce
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFC  175 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v  175 (177)
                      ++.      +++..+++       ++|++|||||...       ..++|+..+++|+.++.++++.+...   .+..+||
T Consensus        85 ~d~------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV  158 (271)
T 4ibo_A           85 TSE------SEIIEAFARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIV  158 (271)
T ss_dssp             TCH------HHHHHHHHHHHHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred             CCH------HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEE
Confidence            998      66666654       7999999999753       24678889999999999998876542   1445777


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       159 ~i  160 (271)
T 4ibo_A          159 NI  160 (271)
T ss_dssp             EE
T ss_pred             EE
Confidence            64

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.61  E-value=7.9e-15  Score=111.20  Aligned_cols=123  Identities=15%  Similarity=0.130  Sum_probs=87.6

Q ss_pred             cccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489         31 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS  110 (177)
Q Consensus        31 ~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  110 (177)
                      +....+|+++||||+|+||.++++.|++.|   .+|++.+++... ...+.......             ...++.++.+
T Consensus         8 ~~~~~~k~vlITGas~giG~~ia~~l~~~G---~~v~~~~~~~~~-~~~~~~~~~~~-------------~~~~~~~~~~   70 (256)
T 3ezl_A            8 HMVMSQRIAYVTGGMGGIGTSICQRLHKDG---FRVVAGCGPNSP-RRVKWLEDQKA-------------LGFDFYASEG   70 (256)
T ss_dssp             -----CEEEEETTTTSHHHHHHHHHHHHTT---EEEEEEECTTCS-SHHHHHHHHHH-------------TTCCCEEEEC
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCCHH-HHHHHHHHHHh-------------cCCeeEEEec
Confidence            344678999999999999999999999999   688887754322 22222222211             2357889999


Q ss_pred             CCCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHH----hcCCCC
Q psy17489        111 NLESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAK----ECVNLK  172 (177)
Q Consensus       111 D~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~  172 (177)
                      |+++.      ++++.+++       ++|++|||||...       ..+.++..+++|+.++.++++.+.    +. +..
T Consensus        71 Dv~~~------~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g  143 (256)
T 3ezl_A           71 NVGDW------DSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVER-GWG  143 (256)
T ss_dssp             CTTCH------HHHHHHHHHHHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCE
T ss_pred             CCCCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCC
Confidence            99998      56666554       7899999999753       246788899999999999877764    33 456


Q ss_pred             CceeC
Q psy17489        173 RFCEL  177 (177)
Q Consensus       173 ~~v~v  177 (177)
                      +||++
T Consensus       144 ~iv~i  148 (256)
T 3ezl_A          144 RIINI  148 (256)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            77764

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.61  E-value=3.9e-15  Score=113.14  Aligned_cols=121  Identities=12%  Similarity=0.119  Sum_probs=89.7

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|+...  ..+.+.++...            ...++.++.+|++
T Consensus        12 ~~~k~vlITGasggiG~~~a~~l~~~G---~~V~~~~r~~~~--~~~~~~~l~~~------------~~~~~~~~~~Dl~   74 (265)
T 1h5q_A           12 FVNKTIIVTGGNRGIGLAFTRAVAAAG---ANVAVIYRSAAD--AVEVTEKVGKE------------FGVKTKAYQCDVS   74 (265)
T ss_dssp             CTTEEEEEETTTSHHHHHHHHHHHHTT---EEEEEEESSCTT--HHHHHHHHHHH------------HTCCEEEEECCTT
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCC---CeEEEEeCcchh--hHHHHHHHHHh------------cCCeeEEEEeeCC
Confidence            578999999999999999999999999   689999986532  22222222110            1257889999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc----CCCCCce
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC----VNLKRFC  175 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v  175 (177)
                      +.      +++..+++       ++|+|||+||...       ..+.++..+++|+.++.++++++.+.    +...+||
T Consensus        75 ~~------~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv  148 (265)
T 1h5q_A           75 NT------DIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIV  148 (265)
T ss_dssp             CH------HHHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred             CH------HHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEE
Confidence            97      56665543       5899999999753       23567788999999999999987543    1246777


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       149 ~~  150 (265)
T 1h5q_A          149 VT  150 (265)
T ss_dssp             EE
T ss_pred             Ee
Confidence            64

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.61  E-value=6.6e-15  Score=111.78  Aligned_cols=122  Identities=12%  Similarity=0.113  Sum_probs=88.3

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   ++|++++|+.. ... +.+.+.+..            ...++.++.+|+
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G---~~V~~~~r~~~-~~~-~~~~~~l~~------------~~~~~~~~~~D~   66 (261)
T 1gee_A            4 DLEGKVVVITGSSTGLGKSMAIRFATEK---AKVVVNYRSKE-DEA-NSVLEEIKK------------VGGEAIAVKGDV   66 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCH-HHH-HHHHHHHHH------------TTCEEEEEECCT
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEcCCCh-HHH-HHHHHHHHh------------cCCceEEEECCC
Confidence            3578999999999999999999999999   68999988321 111 111111110            124678899999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CC-CCCc
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VN-LKRF  174 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~-~~~~  174 (177)
                      ++.      +++..+++       ++|+||||||....       .+.++..+++|+.++.++++.+.+.   .+ ..+|
T Consensus        67 ~~~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~i  140 (261)
T 1gee_A           67 TVE------SDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTV  140 (261)
T ss_dssp             TSH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEE
T ss_pred             CCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEE
Confidence            997      66666554       79999999997532       3667889999999999988876542   13 5678


Q ss_pred             eeC
Q psy17489        175 CEL  177 (177)
Q Consensus       175 v~v  177 (177)
                      |++
T Consensus       141 v~i  143 (261)
T 1gee_A          141 INM  143 (261)
T ss_dssp             EEE
T ss_pred             EEe
Confidence            764

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.61  E-value=6.7e-15  Score=110.69  Aligned_cols=121  Identities=11%  Similarity=0.116  Sum_probs=87.4

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCc----CeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDI----GAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      +|+++||||+|+||.++++.|++.|+..    .+|++++|+.      +.+......     +    .....++.++.+|
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~------~~~~~~~~~-----~----~~~~~~~~~~~~D   66 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTA------ADLEKISLE-----C----RAEGALTDTITAD   66 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCH------HHHHHHHHH-----H----HTTTCEEEEEECC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCH------HHHHHHHHH-----H----HccCCeeeEEEec
Confidence            6899999999999999999999998300    0788888864      222221110     0    0012468899999


Q ss_pred             CCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCc
Q psy17489        112 LESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRF  174 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~  174 (177)
                      +++.      +++..+++       ++|+||||||...       ..+.++..+++|+.++.++++.+...   .+..+|
T Consensus        67 ~~~~------~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~i  140 (244)
T 2bd0_A           67 ISDM------ADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHI  140 (244)
T ss_dssp             TTSH------HHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred             CCCH------HHHHHHHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEE
Confidence            9998      66666654       7999999999753       23678889999999999999887431   155677


Q ss_pred             eeC
Q psy17489        175 CEL  177 (177)
Q Consensus       175 v~v  177 (177)
                      |++
T Consensus       141 v~i  143 (244)
T 2bd0_A          141 FFI  143 (244)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            764

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.61  E-value=3.3e-16  Score=115.39  Aligned_cols=108  Identities=13%  Similarity=0.175  Sum_probs=87.1

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      .+|+++||||+|+||+++++.|++.|+ ..+|++++|++...                         ..++.++.+|+.+
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~-~~~V~~~~r~~~~~-------------------------~~~~~~~~~D~~~   57 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPT-LAKVIAPARKALAE-------------------------HPRLDNPVGPLAE   57 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTT-CCEEECCBSSCCCC-------------------------CTTEECCBSCHHH
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCC-CCeEEEEeCCCccc-------------------------CCCceEEeccccC
Confidence            367999999999999999999999983 12899999876420                         1467888899988


Q ss_pred             CCCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        115 EHLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      .      +.+..++  +|+|||+|+.... ..+++.++++|+.++.++++++++. ++++|||+
T Consensus        58 ~------~~~~~~~--~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~  112 (215)
T 2a35_A           58 L------LPQLDGS--IDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEM-GARHYLVV  112 (215)
T ss_dssp             H------GGGCCSC--CSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEE
T ss_pred             H------HHHHHhh--hcEEEECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHc-CCCEEEEE
Confidence            6      4555555  8999999997542 2456778999999999999999998 88899984

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.61  E-value=1e-14  Score=111.97  Aligned_cols=129  Identities=11%  Similarity=0.042  Sum_probs=91.3

Q ss_pred             cccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCC-------ChHHHHHHHHhhhhhhcccccCcccCC
Q psy17489         31 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGS-------SPEERVKNMLNSVIFDRLNKEVPDFRS  103 (177)
Q Consensus        31 ~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      ...+++|+++||||+|+||.++++.|++.|   .+|++++|+....       ...+.+.+....         ......
T Consensus         6 ~~~l~~k~~lVTGas~GIG~a~a~~la~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~   73 (277)
T 3tsc_A            6 AGKLEGRVAFITGAARGQGRAHAVRMAAEG---ADIIAVDIAGKLPSCVPYDPASPDDLSETVRL---------VEAANR   73 (277)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEECCSCCCTTCCSCCCCHHHHHHHHHH---------HHHTTC
T ss_pred             ccccCCCEEEEECCccHHHHHHHHHHHHcC---CEEEEEeccccccccccccccCHHHHHHHHHH---------HHhcCC
Confidence            345789999999999999999999999999   6899998853210       011233322211         011235


Q ss_pred             CeEEEeCCCCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc-
Q psy17489        104 KIQVIPSNLESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC-  168 (177)
Q Consensus       104 ~v~~~~~D~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~-  168 (177)
                      ++.++.+|+++.      +++..+++       ++|++|||||....       .+.|+..+++|+.++.++++.+... 
T Consensus        74 ~~~~~~~D~~~~------~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~  147 (277)
T 3tsc_A           74 RIVAAVVDTRDF------DRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRI  147 (277)
T ss_dssp             CEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             eEEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence            788999999998      66666543       69999999997532       4678889999999999999886442 


Q ss_pred             ---CCCCCceeC
Q psy17489        169 ---VNLKRFCEL  177 (177)
Q Consensus       169 ---~~~~~~v~v  177 (177)
                         +...+||++
T Consensus       148 ~~~~~~g~iv~i  159 (277)
T 3tsc_A          148 IEGGRGGSIILI  159 (277)
T ss_dssp             HHHTSCEEEEEE
T ss_pred             HhcCCCCEEEEE
Confidence               123467653

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.61  E-value=1.6e-14  Score=110.97  Aligned_cols=122  Identities=20%  Similarity=0.216  Sum_probs=86.7

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   ++|++++|+...  . +.+.+.+..          .....++.++.+|+
T Consensus        29 ~l~~k~vlVTGasggIG~~la~~l~~~G---~~V~~~~r~~~~--~-~~~~~~~~~----------~~~~~~~~~~~~Dl   92 (279)
T 1xg5_A           29 RWRDRLALVTGASGGIGAAVARALVQQG---LKVVGCARTVGN--I-EELAAECKS----------AGYPGTLIPYRCDL   92 (279)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHH--H-HHHHHHHHH----------TTCSSEEEEEECCT
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEECChHH--H-HHHHHHHHh----------cCCCceEEEEEecC
Confidence            3678999999999999999999999999   689999986421  1 111111110          00113578899999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHH----HHHHHHHHhcCCC--C
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYAT----KQMLNLAKECVNL--K  172 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~----~~ll~~~~~~~~~--~  172 (177)
                      ++.      +++..+++       ++|+|||+||...       ..+.++..+++|+.++    ..+++.+++. +.  .
T Consensus        93 ~~~------~~v~~~~~~~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~-~~~~g  165 (279)
T 1xg5_A           93 SNE------EDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKER-NVDDG  165 (279)
T ss_dssp             TCH------HHHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCCSC
T ss_pred             CCH------HHHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCCc
Confidence            998      66666554       7999999999643       2467788999999994    4455556665 44  6


Q ss_pred             CceeC
Q psy17489        173 RFCEL  177 (177)
Q Consensus       173 ~~v~v  177 (177)
                      +||++
T Consensus       166 ~iv~i  170 (279)
T 1xg5_A          166 HIINI  170 (279)
T ss_dssp             EEEEE
T ss_pred             eEEEE
Confidence            78764

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.61  E-value=1.8e-14  Score=108.95  Aligned_cols=111  Identities=14%  Similarity=0.180  Sum_probs=83.9

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   ++|++++|+.. ....+...+...             ...++.++.+|+
T Consensus         4 ~l~~k~vlVTGasggiG~~~a~~l~~~G---~~V~~~~r~~~-~~~~~~~~~~~~-------------~~~~~~~~~~D~   66 (258)
T 3afn_B            4 DLKGKRVLITGSSQGIGLATARLFARAG---AKVGLHGRKAP-ANIDETIASMRA-------------DGGDAAFFAADL   66 (258)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCC-TTHHHHHHHHHH-------------TTCEEEEEECCT
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEECCCch-hhHHHHHHHHHh-------------cCCceEEEECCC
Confidence            3578999999999999999999999999   58999999721 222222222111             124688999999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcc-cC-------chHHHHHHHHHhHHHHHHHHHHHH
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAAS-LR-------FDEALQKAIRANLYATKQMLNLAK  166 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~-~~-------~~~~~~~~~~~nv~~~~~ll~~~~  166 (177)
                      ++.      +++..+++       ++|+|||+||. ..       ..+.++..+++|+.++.++++.+.
T Consensus        67 ~~~------~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~  129 (258)
T 3afn_B           67 ATS------EACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFAL  129 (258)
T ss_dssp             TSH------HHHHHHHHHHHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CCH------HHHHHHHHHHHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHH
Confidence            998      67776665       79999999996 22       135677889999999999988764

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.61  E-value=1.1e-14  Score=111.12  Aligned_cols=110  Identities=14%  Similarity=0.177  Sum_probs=86.6

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .++||+++||||+++||.++++.|++.|   .+|++.+|+....   +.+.....             ...++.++.+|+
T Consensus         4 ~L~gKvalVTGas~GIG~aia~~la~~G---a~Vv~~~r~~~~~---~~~~~~~~-------------~~~~~~~~~~Dv   64 (258)
T 4gkb_A            4 NLQDKVVIVTGGASGIGGAISMRLAEER---AIPVVFARHAPDG---AFLDALAQ-------------RQPRATYLPVEL   64 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCCCH---HHHHHHHH-------------HCTTCEEEECCT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEECCcccH---HHHHHHHh-------------cCCCEEEEEeec
Confidence            4789999999999999999999999999   7999999986542   22222211             236788999999


Q ss_pred             CCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        113 ESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      +++      ++++.++       .++|++|||||...      ..+.|+..+++|+.+++.+.+++..
T Consensus        65 ~~~------~~v~~~v~~~~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p  126 (258)
T 4gkb_A           65 QDD------AQCRDAVAQTIATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVP  126 (258)
T ss_dssp             TCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            998      5555543       47999999999743      2467888999999999999888754

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.61  E-value=1.3e-14  Score=110.32  Aligned_cols=114  Identities=18%  Similarity=0.232  Sum_probs=86.6

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|+...    +.+.+.                ..+ .++.+|++
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~----~~~~~~----------------~~~-~~~~~D~~   59 (256)
T 2d1y_A            4 FAGKGVLVTGGARGIGRAIAQAFAREG---ALVALCDLRPEG----KEVAEA----------------IGG-AFFQVDLE   59 (256)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSTTH----HHHHHH----------------HTC-EEEECCTT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCChhH----HHHHHH----------------hhC-CEEEeeCC
Confidence            568999999999999999999999999   689999987532    111111                013 67899999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCcee
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VNLKRFCE  176 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~  176 (177)
                      +.      +++..+++       ++|++|||||....       .+.|+..+++|+.++.++++++...   .+..+||+
T Consensus        60 ~~------~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~  133 (256)
T 2d1y_A           60 DE------RERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVN  133 (256)
T ss_dssp             CH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence            97      56665543       78999999997532       3577889999999999998887542   25567876


Q ss_pred             C
Q psy17489        177 L  177 (177)
Q Consensus       177 v  177 (177)
                      +
T Consensus       134 i  134 (256)
T 2d1y_A          134 V  134 (256)
T ss_dssp             E
T ss_pred             E
Confidence            4

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.61  E-value=5.3e-15  Score=114.69  Aligned_cols=121  Identities=8%  Similarity=0.076  Sum_probs=90.3

Q ss_pred             ccCCCceEEEecCCcc--hHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEe
Q psy17489         32 DFYRDGQILVTGGTGF--MGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIP  109 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~--iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  109 (177)
                      ..+++|+++||||+|+  ||.++++.|++.|   ++|++.+|++.   ..+.+.+...             ...++.++.
T Consensus        27 ~~l~gk~~lVTGasg~~GIG~aia~~la~~G---~~V~~~~r~~~---~~~~~~~~~~-------------~~~~~~~~~   87 (293)
T 3grk_A           27 GLLQGKRGLILGVANNRSIAWGIAKAAREAG---AELAFTYQGDA---LKKRVEPLAE-------------ELGAFVAGH   87 (293)
T ss_dssp             CTTTTCEEEEECCCSSSSHHHHHHHHHHHTT---CEEEEEECSHH---HHHHHHHHHH-------------HHTCEEEEE
T ss_pred             ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCC---CEEEEEcCCHH---HHHHHHHHHH-------------hcCCceEEE
Confidence            3578999999999977  9999999999999   68998888632   1122222221             124688999


Q ss_pred             CCCCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-----------chHHHHHHHHHhHHHHHHHHHHHHhc-CC
Q psy17489        110 SNLESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-----------FDEALQKAIRANLYATKQMLNLAKEC-VN  170 (177)
Q Consensus       110 ~D~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-----------~~~~~~~~~~~nv~~~~~ll~~~~~~-~~  170 (177)
                      +|+++.      +++..+++       ++|++|||||...           ..+.|+..+++|+.++.++++++... .+
T Consensus        88 ~Dv~d~------~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~  161 (293)
T 3grk_A           88 CDVADA------ASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD  161 (293)
T ss_dssp             CCTTCH------HHHHHHHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT
T ss_pred             CCCCCH------HHHHHHHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence            999998      66666554       7899999999753           14677889999999999999998764 12


Q ss_pred             CCCceeC
Q psy17489        171 LKRFCEL  177 (177)
Q Consensus       171 ~~~~v~v  177 (177)
                      ..++|++
T Consensus       162 ~g~Iv~i  168 (293)
T 3grk_A          162 GGSILTL  168 (293)
T ss_dssp             CEEEEEE
T ss_pred             CCEEEEE
Confidence            3466653

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.61  E-value=5.7e-15  Score=111.41  Aligned_cols=120  Identities=18%  Similarity=0.160  Sum_probs=89.3

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   .+|++++|+...  . +.+.+....            ...++.++.+|++
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~~G---~~v~~~~r~~~~--~-~~~~~~~~~------------~~~~~~~~~~D~~   64 (247)
T 3lyl_A            3 LNEKVALVTGASRGIGFEVAHALASKG---ATVVGTATSQAS--A-EKFENSMKE------------KGFKARGLVLNIS   64 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESSHHH--H-HHHHHHHHH------------TTCCEEEEECCTT
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHHh------------cCCceEEEEecCC
Confidence            568999999999999999999999999   689999986521  1 222221111            2357899999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCcee
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFCE  176 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~  176 (177)
                      +.      ++++.+++       ++|++|||||...       ..+.++..+++|+.++.++++.+...   .+..+||+
T Consensus        65 ~~------~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~  138 (247)
T 3lyl_A           65 DI------ESIQNFFAEIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIIS  138 (247)
T ss_dssp             CH------HHHHHHHHHHHHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEE
Confidence            98      66666554       5899999999753       24677889999999999999887542   14456766


Q ss_pred             C
Q psy17489        177 L  177 (177)
Q Consensus       177 v  177 (177)
                      +
T Consensus       139 i  139 (247)
T 3lyl_A          139 I  139 (247)
T ss_dssp             E
T ss_pred             E
Confidence            3

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.61  E-value=4.6e-15  Score=111.49  Aligned_cols=118  Identities=15%  Similarity=0.209  Sum_probs=86.3

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEE-EeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM-VRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      +|+++||||+|+||.++++.|++.|   ++|+++ +|+...  . +.+.+.+..            ...++.++.+|+++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G---~~v~~~~~r~~~~--~-~~~~~~~~~------------~~~~~~~~~~D~~~   62 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAG---CKVLVNYARSAKA--A-EEVSKQIEA------------YGGQAITFGGDVSK   62 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHHH--H-HHHHHHHHH------------HTCEEEEEECCTTS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEcCCCHHH--H-HHHHHHHHh------------cCCcEEEEeCCCCC
Confidence            5799999999999999999999999   578875 564311  1 111111110            12468889999999


Q ss_pred             CCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCceeC
Q psy17489        115 EHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFCEL  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~v  177 (177)
                      .      +++..+++       ++|++||+||...       ..+.++..+++|+.++.++++.+.+.   .+..+||++
T Consensus        63 ~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~  136 (244)
T 1edo_A           63 E------ADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINI  136 (244)
T ss_dssp             H------HHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred             H------HHHHHHHHHHHHHcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence            8      66766654       7899999999753       23567889999999999998887652   256688764

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.61  E-value=6e-15  Score=112.18  Aligned_cols=117  Identities=11%  Similarity=0.193  Sum_probs=89.1

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   ++|++.+|++      +.+.+....            ...++.++.+|+
T Consensus         5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G---~~V~~~~r~~------~~~~~~~~~------------~~~~~~~~~~Dv   63 (255)
T 4eso_A            5 NYQGKKAIVIGGTHGMGLATVRRLVEGG---AEVLLTGRNE------SNIARIREE------------FGPRVHALRSDI   63 (255)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHHH------------HGGGEEEEECCT
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCH------HHHHHHHHH------------hCCcceEEEccC
Confidence            4678999999999999999999999999   6899999864      222222211            124688999999


Q ss_pred             CCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc-CCCCCcee
Q psy17489        113 ESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC-VNLKRFCE  176 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~  176 (177)
                      ++.      +++..++       .++|++|||||...       ..+.|+..+++|+.++.++++.+... .+-.++|+
T Consensus        64 ~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~  136 (255)
T 4eso_A           64 ADL------NEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVF  136 (255)
T ss_dssp             TCH------HHHHHHHHHHHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEE
T ss_pred             CCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEE
Confidence            998      5565544       37899999999753       24678889999999999999998764 11235665

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.60  E-value=1.3e-14  Score=109.67  Aligned_cols=115  Identities=14%  Similarity=0.144  Sum_probs=87.5

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|+.      +.+.+....              ..+.++.+|++
T Consensus         3 l~~k~vlVTGas~giG~~ia~~l~~~G---~~V~~~~r~~------~~~~~~~~~--------------~~~~~~~~D~~   59 (245)
T 1uls_A            3 LKDKAVLITGAAHGIGRATLELFAKEG---ARLVACDIEE------GPLREAAEA--------------VGAHPVVMDVA   59 (245)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHHT--------------TTCEEEECCTT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCH------HHHHHHHHH--------------cCCEEEEecCC
Confidence            468999999999999999999999999   6899998864      233322211              12678899999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCcee
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFCE  176 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~  176 (177)
                      +.      +++..+++       ++|++|||||...       ..+.|+..+++|+.++.++++.+.+.   .+..+||+
T Consensus        60 ~~------~~~~~~~~~~~~~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~  133 (245)
T 1uls_A           60 DP------ASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVL  133 (245)
T ss_dssp             CH------HHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEE
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEE
Confidence            97      56665544       5899999999743       24678889999999999998887642   24567776


Q ss_pred             C
Q psy17489        177 L  177 (177)
Q Consensus       177 v  177 (177)
                      +
T Consensus       134 i  134 (245)
T 1uls_A          134 T  134 (245)
T ss_dssp             E
T ss_pred             E
Confidence            4

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.60  E-value=9.8e-15  Score=111.32  Aligned_cols=122  Identities=13%  Similarity=0.162  Sum_probs=90.4

Q ss_pred             cCCCceEEEecCCcc--hHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489         33 FYRDGQILVTGGTGF--MGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS  110 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~--iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  110 (177)
                      .+++|+++||||+|+  ||.++++.|++.|   .+|++.+|+...   .+.+.+....         .  ...++.++.+
T Consensus         4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G---~~V~~~~r~~~~---~~~~~~~~~~---------~--~~~~~~~~~~   66 (266)
T 3oig_A            4 SLEGRNIVVMGVANKRSIAWGIARSLHEAG---ARLIFTYAGERL---EKSVHELAGT---------L--DRNDSIILPC   66 (266)
T ss_dssp             CCTTCEEEEECCCSTTSHHHHHHHHHHHTT---CEEEEEESSGGG---HHHHHHHHHT---------S--SSCCCEEEEC
T ss_pred             ccCCCEEEEEcCCCCCcHHHHHHHHHHHCC---CEEEEecCchHH---HHHHHHHHHh---------c--CCCCceEEeC
Confidence            467899999999977  9999999999999   689998886422   2333333221         0  1136899999


Q ss_pred             CCCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-----------chHHHHHHHHHhHHHHHHHHHHHHhcC-CC
Q psy17489        111 NLESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-----------FDEALQKAIRANLYATKQMLNLAKECV-NL  171 (177)
Q Consensus       111 D~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-----------~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~  171 (177)
                      |+++.      ++++.+++       ++|++|||||...           ..+.+...+++|+.++.++++.+...- +-
T Consensus        67 D~~~~------~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~  140 (266)
T 3oig_A           67 DVTND------AEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEG  140 (266)
T ss_dssp             CCSSS------HHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTC
T ss_pred             CCCCH------HHHHHHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCC
Confidence            99998      66666554       7899999999753           135677889999999999999987651 12


Q ss_pred             CCceeC
Q psy17489        172 KRFCEL  177 (177)
Q Consensus       172 ~~~v~v  177 (177)
                      .++|++
T Consensus       141 g~iv~i  146 (266)
T 3oig_A          141 GSIVTL  146 (266)
T ss_dssp             EEEEEE
T ss_pred             ceEEEE
Confidence            366653

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.60  E-value=8.5e-15  Score=113.49  Aligned_cols=123  Identities=15%  Similarity=0.155  Sum_probs=85.7

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      ++++|+++||||+|+||.++++.|++.|   ++|++.+|+...  ..+.+.++..            ....++.++.+|+
T Consensus         9 ~~~~k~vlITGas~GIG~~~a~~L~~~G---~~V~~~~r~~~~--~~~~~~~l~~------------~~~~~~~~~~~Dl   71 (311)
T 3o26_A            9 VTKRRCAVVTGGNKGIGFEICKQLSSNG---IMVVLTCRDVTK--GHEAVEKLKN------------SNHENVVFHQLDV   71 (311)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESCHHH--HHHHHHHHHT------------TTCCSEEEEECCT
T ss_pred             cCCCcEEEEecCCchHHHHHHHHHHHCC---CEEEEEeCCHHH--HHHHHHHHHh------------cCCCceEEEEccC
Confidence            4578999999999999999999999999   689999997521  1111222111            0124789999999


Q ss_pred             CCCCCCCCHHHHHHH-------hcCCcEEEEcCcccC-------------------------------------chHHHH
Q psy17489        113 ESEHLGLSEDSEQLI-------KSKVNIIFHCAASLR-------------------------------------FDEALQ  148 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~-------~~~~d~vi~~aa~~~-------------------------------------~~~~~~  148 (177)
                      ++..     +.+..+       +.++|++|||||...                                     ..+.++
T Consensus        72 ~~~~-----~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (311)
T 3o26_A           72 TDPI-----ATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAE  146 (311)
T ss_dssp             TSCH-----HHHHHHHHHHHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHH
T ss_pred             CCcH-----HHHHHHHHHHHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhh
Confidence            9961     233333       347999999999753                                     124566


Q ss_pred             HHHHHhHHHHHHHHHHHHhc---CCCCCceeC
Q psy17489        149 KAIRANLYATKQMLNLAKEC---VNLKRFCEL  177 (177)
Q Consensus       149 ~~~~~nv~~~~~ll~~~~~~---~~~~~~v~v  177 (177)
                      ..+++|+.++.++++.+...   .+..++|++
T Consensus       147 ~~~~~N~~g~~~l~~~~~~~l~~~~~~~IV~i  178 (311)
T 3o26_A          147 ECLKINYNGVKSVTEVLIPLLQLSDSPRIVNV  178 (311)
T ss_dssp             HHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEE
T ss_pred             hheeeeeehHHHHHHHhhHhhccCCCCeEEEE
Confidence            77999999999998887532   145677764

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.60  E-value=2e-14  Score=108.51  Aligned_cols=105  Identities=19%  Similarity=0.253  Sum_probs=86.0

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      ..+||+++||||+++||.++++.|.+.|   ++|++.+|+.+...                     .....++..+.+|+
T Consensus         8 lf~GK~alVTGas~GIG~aia~~la~~G---a~Vv~~~~~~~~~~---------------------~~~~~~~~~~~~Dv   63 (242)
T 4b79_A            8 IYAGQQVLVTGGSSGIGAAIAMQFAELG---AEVVALGLDADGVH---------------------APRHPRIRREELDI   63 (242)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSTTSTT---------------------SCCCTTEEEEECCT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHh---------------------hhhcCCeEEEEecC
Confidence            4589999999999999999999999999   79999999764321                     11235788999999


Q ss_pred             CCCCCCCCHHHHHHHhc---CCcEEEEcCcccCc-----hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        113 ESEHLGLSEDSEQLIKS---KVNIIFHCAASLRF-----DEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~---~~d~vi~~aa~~~~-----~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      +++      ++++++++   ++|++|||||....     .++|+..+++|+.+++.+.+++..
T Consensus        64 ~~~------~~v~~~~~~~g~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p  120 (242)
T 4b79_A           64 TDS------QRLQRLFEALPRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARP  120 (242)
T ss_dssp             TCH------HHHHHHHHHCSCCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCH------HHHHHHHHhcCCCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            998      66766654   79999999997542     467889999999999999888754

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.60  E-value=1.2e-14  Score=110.95  Aligned_cols=117  Identities=16%  Similarity=0.212  Sum_probs=88.8

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|+.      +.+.+....            ...++.++.+|++
T Consensus         4 l~~k~vlITGas~gIG~aia~~l~~~G---~~V~~~~r~~------~~~~~~~~~------------~~~~~~~~~~D~~   62 (263)
T 2a4k_A            4 LSGKTILVTGAASGIGRAALDLFAREG---ASLVAVDREE------RLLAEAVAA------------LEAEAIAVVADVS   62 (263)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHHT------------CCSSEEEEECCTT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCH------HHHHHHHHH------------hcCceEEEEcCCC
Confidence            578999999999999999999999999   6899999864      233332221            1146888999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhcC-CCCCceeC
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKECV-NLKRFCEL  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~~~v~v  177 (177)
                      +.      +++..+++       ++|++|||||....       .+.|+..+++|+.++.++++.+...- ...+||++
T Consensus        63 ~~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i  135 (263)
T 2a4k_A           63 DP------KAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLT  135 (263)
T ss_dssp             SH------HHHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred             CH------HHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEE
Confidence            98      56665544       68999999997532       35677889999999999999987641 13467653

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.60  E-value=7.4e-15  Score=111.88  Aligned_cols=120  Identities=11%  Similarity=0.117  Sum_probs=89.6

Q ss_pred             cCCCceEEEecCC--cchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489         33 FYRDGQILVTGGT--GFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS  110 (177)
Q Consensus        33 ~~~~~~vlVtG~~--G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  110 (177)
                      .+++|+++||||+  |+||.++++.|++.|   ++|++++|+..   ..+.+.++...             ...+.++.+
T Consensus         5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G---~~V~~~~r~~~---~~~~~~~l~~~-------------~~~~~~~~~   65 (261)
T 2wyu_A            5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAG---AEVALSYQAER---LRPEAEKLAEA-------------LGGALLFRA   65 (261)
T ss_dssp             CCTTCEEEEESCCSSSSHHHHHHHHHHHHT---CEEEEEESCGG---GHHHHHHHHHH-------------TTCCEEEEC
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCC---CEEEEEcCCHH---HHHHHHHHHHh-------------cCCcEEEEC
Confidence            3578999999999  999999999999999   68999998752   22333332211             124788999


Q ss_pred             CCCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-----------chHHHHHHHHHhHHHHHHHHHHHHhcC-CC
Q psy17489        111 NLESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-----------FDEALQKAIRANLYATKQMLNLAKECV-NL  171 (177)
Q Consensus       111 D~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-----------~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~  171 (177)
                      |+++.      +++..+++       ++|++|||||...           ..+.|+..+++|+.++.++++++.+.- +-
T Consensus        66 D~~~~------~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~  139 (261)
T 2wyu_A           66 DVTQD------EELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREG  139 (261)
T ss_dssp             CTTCH------HHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE
T ss_pred             CCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccC
Confidence            99998      66666554       7899999999753           135678899999999999999987641 11


Q ss_pred             CCceeC
Q psy17489        172 KRFCEL  177 (177)
Q Consensus       172 ~~~v~v  177 (177)
                      .+||++
T Consensus       140 g~iv~i  145 (261)
T 2wyu_A          140 GGIVTL  145 (261)
T ss_dssp             EEEEEE
T ss_pred             CEEEEE
Confidence            366653

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.60  E-value=1.1e-14  Score=110.06  Aligned_cols=116  Identities=12%  Similarity=0.139  Sum_probs=87.0

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCe-EEEeCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKI-QVIPSNL  112 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~D~  112 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|+.      +.+.+....            ...++ .++.+|+
T Consensus         9 ~~~k~vlITGasggiG~~la~~l~~~G---~~V~~~~r~~------~~~~~~~~~------------~~~~~~~~~~~D~   67 (254)
T 2wsb_A            9 LDGACAAVTGAGSGIGLEICRAFAASG---ARLILIDREA------AALDRAAQE------------LGAAVAARIVADV   67 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHHH------------HGGGEEEEEECCT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCH------HHHHHHHHH------------hcccceeEEEEec
Confidence            578999999999999999999999999   6899999864      222222111            01345 7899999


Q ss_pred             CCCCCCCCHHHHHHHh------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCce
Q psy17489        113 ESEHLGLSEDSEQLIK------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAK----ECVNLKRFC  175 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v  175 (177)
                      ++.      +.+..++      .++|+|||+||....       .+.++..+++|+.++.++++.+.    +. +.++||
T Consensus        68 ~~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~iv  140 (254)
T 2wsb_A           68 TDA------EAMTAAAAEAEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVAR-GAGAIV  140 (254)
T ss_dssp             TCH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEE
T ss_pred             CCH------HHHHHHHHHHHhhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEE
Confidence            997      5666654      479999999997532       35677889999999888877653    34 567887


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       141 ~i  142 (254)
T 2wsb_A          141 NL  142 (254)
T ss_dssp             EE
T ss_pred             EE
Confidence            64

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.60  E-value=3.2e-15  Score=115.24  Aligned_cols=121  Identities=11%  Similarity=0.129  Sum_probs=89.8

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   ++|++++|+.      +.+.+....         ......++.++.+|+
T Consensus         5 ~l~gk~vlVTGas~GIG~aia~~la~~G---~~V~~~~r~~------~~~~~~~~~---------~~~~~~~~~~~~~Dv   66 (280)
T 3tox_A            5 RLEGKIAIVTGASSGIGRAAALLFAREG---AKVVVTARNG------NALAELTDE---------IAGGGGEAAALAGDV   66 (280)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEECCSCH------HHHHHHHHH---------HTTTTCCEEECCCCT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEECCH------HHHHHHHHH---------HHhcCCcEEEEECCC
Confidence            3678999999999999999999999999   6899988864      222222111         011235788999999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCc
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRF  174 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~  174 (177)
                      ++.      +++..+++       ++|++|||||...        ..+.|+..+++|+.++.++++++...   .+..++
T Consensus        67 ~~~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~i  140 (280)
T 3tox_A           67 GDE------ALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSL  140 (280)
T ss_dssp             TCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEE
T ss_pred             CCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEE
Confidence            998      56666554       7999999999642        24678889999999999999987542   134466


Q ss_pred             eeC
Q psy17489        175 CEL  177 (177)
Q Consensus       175 v~v  177 (177)
                      |++
T Consensus       141 v~i  143 (280)
T 3tox_A          141 TFT  143 (280)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            653

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.60  E-value=9.7e-15  Score=111.71  Aligned_cols=122  Identities=16%  Similarity=0.194  Sum_probs=88.0

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      ++.+|+++||||+|+||.++++.|++.|   .+|++.+++..     +........         ......++.++.+|+
T Consensus        22 ~~~~k~vlITGas~gIG~~~a~~l~~~G---~~v~~~~~~~~-----~~~~~~~~~---------~~~~~~~~~~~~~Dl   84 (269)
T 3gk3_A           22 MQAKRVAFVTGGMGGLGAAISRRLHDAG---MAVAVSHSERN-----DHVSTWLMH---------ERDAGRDFKAYAVDV   84 (269)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHTTT---CEEEEEECSCH-----HHHHHHHHH---------HHTTTCCCEEEECCT
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEcCCch-----HHHHHHHHH---------HHhcCCceEEEEecC
Confidence            4678999999999999999999999999   58888885432     111111110         011235789999999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCce
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFC  175 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v  175 (177)
                      ++.      ++++.+++       ++|++|||||...       ..++++..+++|+.++.++++.+...   .+..+||
T Consensus        85 ~~~------~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv  158 (269)
T 3gk3_A           85 ADF------ESCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIV  158 (269)
T ss_dssp             TCH------HHHHHHHHHHHHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred             CCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEE
Confidence            998      56666544       7999999999753       24678889999999999998887541   1445777


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       159 ~i  160 (269)
T 3gk3_A          159 NI  160 (269)
T ss_dssp             EE
T ss_pred             Ee
Confidence            64

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.60  E-value=8.8e-15  Score=111.86  Aligned_cols=122  Identities=13%  Similarity=0.169  Sum_probs=88.9

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   ++|++.+|+...  . +...+.+..           ....++.++.+|+
T Consensus        17 ~l~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~--~-~~~~~~l~~-----------~~~~~~~~~~~Dv   79 (266)
T 4egf_A           17 RLDGKRALITGATKGIGADIARAFAAAG---ARLVLSGRDVSE--L-DAARRALGE-----------QFGTDVHTVAIDL   79 (266)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHH--H-HHHHHHHHH-----------HHCCCEEEEECCT
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHHH-----------hcCCcEEEEEecC
Confidence            3678999999999999999999999999   689999986421  1 111111110           0135789999999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc----CCCCCc
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC----VNLKRF  174 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~  174 (177)
                      ++.      +++..+++       ++|++|||||...       ..+.|+..+++|+.++.++++++.+.    +...++
T Consensus        80 ~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~i  153 (266)
T 4egf_A           80 AEP------DAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAI  153 (266)
T ss_dssp             TST------THHHHHHHHHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEE
T ss_pred             CCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEE
Confidence            998      55555543       7999999999753       24668889999999999999887542    113466


Q ss_pred             eeC
Q psy17489        175 CEL  177 (177)
Q Consensus       175 v~v  177 (177)
                      |++
T Consensus       154 v~i  156 (266)
T 4egf_A          154 ITV  156 (266)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            653

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.60  E-value=1.1e-14  Score=113.01  Aligned_cols=121  Identities=10%  Similarity=0.083  Sum_probs=90.8

Q ss_pred             ccCCCceEEEecCCc--chHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEe
Q psy17489         32 DFYRDGQILVTGGTG--FMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIP  109 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G--~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  109 (177)
                      ..+++|+++||||+|  +||.++++.|++.|   ++|++.+|++..   .+.+.+....             ..++.++.
T Consensus        26 ~~l~~k~vlVTGasg~~GIG~~ia~~la~~G---~~V~~~~r~~~~---~~~~~~~~~~-------------~~~~~~~~   86 (296)
T 3k31_A           26 MLMEGKKGVIIGVANDKSLAWGIAKAVCAQG---AEVALTYLSETF---KKRVDPLAES-------------LGVKLTVP   86 (296)
T ss_dssp             CTTTTCEEEEECCCSTTSHHHHHHHHHHHTT---CEEEEEESSGGG---HHHHHHHHHH-------------HTCCEEEE
T ss_pred             hccCCCEEEEEeCCCCCCHHHHHHHHHHHCC---CEEEEEeCChHH---HHHHHHHHHh-------------cCCeEEEE
Confidence            346799999999997  99999999999999   689999987532   2333332221             13568899


Q ss_pred             CCCCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-----------chHHHHHHHHHhHHHHHHHHHHHHhc-CC
Q psy17489        110 SNLESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-----------FDEALQKAIRANLYATKQMLNLAKEC-VN  170 (177)
Q Consensus       110 ~D~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-----------~~~~~~~~~~~nv~~~~~ll~~~~~~-~~  170 (177)
                      +|+++.      +++..+++       ++|++|||||...           ..+.|+..+++|+.++.++++.+... .+
T Consensus        87 ~Dv~d~------~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~  160 (296)
T 3k31_A           87 CDVSDA------ESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN  160 (296)
T ss_dssp             CCTTCH------HHHHHHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT
T ss_pred             cCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            999998      66666554       7899999999753           13578889999999999999998764 12


Q ss_pred             CCCceeC
Q psy17489        171 LKRFCEL  177 (177)
Q Consensus       171 ~~~~v~v  177 (177)
                      ..++|++
T Consensus       161 ~g~IV~i  167 (296)
T 3k31_A          161 GGSILTL  167 (296)
T ss_dssp             CEEEEEE
T ss_pred             CCEEEEE
Confidence            2366653

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.60  E-value=1.2e-14  Score=110.74  Aligned_cols=120  Identities=11%  Similarity=0.100  Sum_probs=88.2

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   ++|++.+++... .. +...+...            ....++.++.+|+
T Consensus         5 ~l~~k~vlVTGas~GIG~aia~~la~~G---~~V~~~~~~~~~-~~-~~~~~~~~------------~~~~~~~~~~~Dv   67 (259)
T 3edm_A            5 RFTNRTIVVAGAGRDIGRACAIRFAQEG---ANVVLTYNGAAE-GA-ATAVAEIE------------KLGRSALAIKADL   67 (259)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECSSCH-HH-HHHHHHHH------------TTTSCCEEEECCT
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEcCCCHH-HH-HHHHHHHH------------hcCCceEEEEcCC
Confidence            3678999999999999999999999999   688887554321 11 11111111            1235788999999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHhcCCC--CCce
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKECVNL--KRFC  175 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~~~~~--~~~v  175 (177)
                      ++.      ++++.+++       ++|++|||||...        ..+.|+..+++|+.++.++++++... -.  .++|
T Consensus        68 ~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~-~~~~g~iv  140 (259)
T 3edm_A           68 TNA------AEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPK-MAKGGAIV  140 (259)
T ss_dssp             TCH------HHHHHHHHHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGG-EEEEEEEE
T ss_pred             CCH------HHHHHHHHHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCEEE
Confidence            998      66666554       7899999998641        24667889999999999999999775 22  2566


Q ss_pred             e
Q psy17489        176 E  176 (177)
Q Consensus       176 ~  176 (177)
                      +
T Consensus       141 ~  141 (259)
T 3edm_A          141 T  141 (259)
T ss_dssp             E
T ss_pred             E
Confidence            5

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.60  E-value=1.1e-14  Score=109.80  Aligned_cols=123  Identities=15%  Similarity=0.173  Sum_probs=87.2

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      ..+++|+++||||+|+||.++++.|++.|   ++|++++|+...  . +.+.+.+..           ....+..++.+|
T Consensus        10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~--~-~~~~~~~~~-----------~~~~~~~~~~~d   72 (247)
T 3i1j_A           10 ELLKGRVILVTGAARGIGAAAARAYAAHG---ASVVLLGRTEAS--L-AEVSDQIKS-----------AGQPQPLIIALN   72 (247)
T ss_dssp             TTTTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESCHHH--H-HHHHHHHHH-----------TTSCCCEEEECC
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEecCHHH--H-HHHHHHHHh-----------cCCCCceEEEec
Confidence            45789999999999999999999999999   689999987521  1 122211111           012456777777


Q ss_pred             C--CCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHhc---CCC
Q psy17489        112 L--ESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKEC---VNL  171 (177)
Q Consensus       112 ~--~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~  171 (177)
                      +  ++.      +++..++       .++|++|||||...        ..+.++..+++|+.++.++++.+...   .+.
T Consensus        73 ~d~~~~------~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~  146 (247)
T 3i1j_A           73 LENATA------QQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSED  146 (247)
T ss_dssp             TTTCCH------HHHHHHHHHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSS
T ss_pred             cccCCH------HHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCC
Confidence            7  655      4555543       37999999999742        23678889999999999999988431   145


Q ss_pred             CCceeC
Q psy17489        172 KRFCEL  177 (177)
Q Consensus       172 ~~~v~v  177 (177)
                      .++|++
T Consensus       147 ~~iv~i  152 (247)
T 3i1j_A          147 ASIAFT  152 (247)
T ss_dssp             EEEEEE
T ss_pred             CeEEEE
Confidence            577763

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.60  E-value=1.3e-14  Score=111.11  Aligned_cols=116  Identities=16%  Similarity=0.220  Sum_probs=87.6

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|++      +.......             ...++.++.+|++
T Consensus         7 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~------~~~~~~~~-------------~~~~~~~~~~Dv~   64 (270)
T 1yde_A            7 YAGKVVVVTGGGRGIGAGIVRAFVNSG---ARVVICDKDE------SGGRALEQ-------------ELPGAVFILCDVT   64 (270)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHH-------------HCTTEEEEECCTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCH------HHHHHHHH-------------HhcCCeEEEcCCC
Confidence            578999999999999999999999999   6899998864      22222211             0134788999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHhc--CCCCCcee
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKEC--VNLKRFCE  176 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~  176 (177)
                      +.      +++..+++       ++|++|||||...        ..++|+..+++|+.++.++++++...  .+..+||+
T Consensus        65 d~------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~  138 (270)
T 1yde_A           65 QE------DDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVIN  138 (270)
T ss_dssp             SH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEE
Confidence            98      66666554       7899999999743        13567889999999999999988642  12357776


Q ss_pred             C
Q psy17489        177 L  177 (177)
Q Consensus       177 v  177 (177)
                      +
T Consensus       139 i  139 (270)
T 1yde_A          139 I  139 (270)
T ss_dssp             E
T ss_pred             E
Confidence            4

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.60  E-value=1.3e-14  Score=109.90  Aligned_cols=113  Identities=15%  Similarity=0.192  Sum_probs=86.6

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+++||||+|+||.++++.|++.|   ++|++.+|+.      +.+.+....            ...++.++.+|+++. 
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~------~~~~~~~~~------------~~~~~~~~~~Dv~~~-   58 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQG---HKVIATGRRQ------ERLQELKDE------------LGDNLYIAQLDVRNR-   58 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHHH------------HCTTEEEEECCTTCH-
T ss_pred             CEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCH------HHHHHHHHH------------hcCceEEEEcCCCCH-
Confidence            579999999999999999999999   6899998864      222222111            114688999999998 


Q ss_pred             CCCCHHHHHHHhc-------CCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCceeC
Q psy17489        117 LGLSEDSEQLIKS-------KVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAK----ECVNLKRFCEL  177 (177)
Q Consensus       117 ~~~~~~~~~~~~~-------~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~v  177 (177)
                           +++..+++       ++|++|||||...        ..++|+..+++|+.++.++++.+.    +. +..+||++
T Consensus        59 -----~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~i  132 (248)
T 3asu_A           59 -----AAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVER-NHGHIINI  132 (248)
T ss_dssp             -----HHHHHHHHTSCTTTCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEE
T ss_pred             -----HHHHHHHHHHHHhCCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEE
Confidence                 67777765       6899999999642        135788899999999999988875    33 45677764

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.60  E-value=1.2e-14  Score=111.01  Aligned_cols=123  Identities=15%  Similarity=0.186  Sum_probs=90.5

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   ++|++++|........+.+.+.+.            ....++.++.+|+
T Consensus         8 ~l~~k~vlVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~~~~~~~~~~~~------------~~~~~~~~~~~Dv   72 (262)
T 3ksu_A            8 DLKNKVIVIAGGIKNLGALTAKTFALES---VNLVLHYHQAKDSDTANKLKDELE------------DQGAKVALYQSDL   72 (262)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHTTSS---CEEEEEESCGGGHHHHHHHHHHHH------------TTTCEEEEEECCC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEecCccCHHHHHHHHHHHH------------hcCCcEEEEECCC
Confidence            4678999999999999999999999999   689988875432211122222111            1235788999999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc-CCCCCcee
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC-VNLKRFCE  176 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~  176 (177)
                      ++.      +++..+++       ++|++|||||...       ..+.|+..+++|+.++.++++.+... .+..++|+
T Consensus        73 ~d~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~  145 (262)
T 3ksu_A           73 SNE------EEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIIT  145 (262)
T ss_dssp             CSH------HHHHHHHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred             CCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEE
Confidence            998      66666654       7899999999753       24678889999999999999998764 12345554

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.60  E-value=6.2e-15  Score=112.06  Aligned_cols=111  Identities=14%  Similarity=0.192  Sum_probs=85.4

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      ..+++|+++||||+|+||.++++.|++.|   ++|++.+|+....                          ..+.++.+|
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~--------------------------~~~~~~~~D   67 (253)
T 2nm0_A           17 RSHMSRSVLVTGGNRGIGLAIARAFADAG---DKVAITYRSGEPP--------------------------EGFLAVKCD   67 (253)
T ss_dssp             ---CCCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSSCCC--------------------------TTSEEEECC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCChHhh--------------------------ccceEEEec
Confidence            44678999999999999999999999999   6899999875321                          236789999


Q ss_pred             CCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCc
Q psy17489        112 LESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VNLKRF  174 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~  174 (177)
                      +++.      ++++.+++       ++|++|||||....       .+.|+..+++|+.++.++++++.+.   .+..+|
T Consensus        68 l~d~------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~i  141 (253)
T 2nm0_A           68 ITDT------EQVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRV  141 (253)
T ss_dssp             TTSH------HHHHHHHHHHHHHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEE
T ss_pred             CCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence            9998      56665543       57999999997532       3567889999999999998876542   145677


Q ss_pred             eeC
Q psy17489        175 CEL  177 (177)
Q Consensus       175 v~v  177 (177)
                      |++
T Consensus       142 v~i  144 (253)
T 2nm0_A          142 VLI  144 (253)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            764

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.60  E-value=1.4e-14  Score=109.75  Aligned_cols=123  Identities=16%  Similarity=0.203  Sum_probs=88.2

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   ++|++++|+...  . +.+.+.+..         ......++.++.+|+
T Consensus         4 ~~~~k~~lVTGas~GIG~aia~~l~~~G---~~V~~~~r~~~~--~-~~~~~~~~~---------~~~~~~~~~~~~~Dv   68 (250)
T 3nyw_A            4 EKQKGLAIITGASQGIGAVIAAGLATDG---YRVVLIARSKQN--L-EKVHDEIMR---------SNKHVQEPIVLPLDI   68 (250)
T ss_dssp             -CCCCEEEEESTTSHHHHHHHHHHHHHT---CEEEEEESCHHH--H-HHHHHHHHH---------HCTTSCCCEEEECCT
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEECCHHH--H-HHHHHHHHH---------hccccCcceEEeccC
Confidence            3578999999999999999999999999   689999987521  1 111111110         000115688999999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc------hHHHHHHHHHhHHHHHHHHHHHHh----cCCCCCce
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF------DEALQKAIRANLYATKQMLNLAKE----CVNLKRFC  175 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~------~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v  175 (177)
                      ++.      +++..+++       ++|++|||||....      .+.|+..+++|+.++.++++++..    . +..++|
T Consensus        69 ~~~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv  141 (250)
T 3nyw_A           69 TDC------TKADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQ-KNGYIF  141 (250)
T ss_dssp             TCH------HHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEE
T ss_pred             CCH------HHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEE
Confidence            998      56665543       68999999997432      366788999999999999998743    3 445666


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       142 ~i  143 (250)
T 3nyw_A          142 NV  143 (250)
T ss_dssp             EE
T ss_pred             EE
Confidence            53

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.60  E-value=6.9e-15  Score=110.24  Aligned_cols=97  Identities=18%  Similarity=0.205  Sum_probs=81.0

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +|+++||||+|+||.++++.|++.|   ++|++++|+...                           .++.++.+|+++.
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G---~~V~~~~r~~~~---------------------------~~~~~~~~D~~~~   51 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARG---YRVVVLDLRREG---------------------------EDLIYVEGDVTRE   51 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHT---CEEEEEESSCCS---------------------------SSSEEEECCTTCH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEccCccc---------------------------cceEEEeCCCCCH
Confidence            6899999999999999999999999   689999987531                           3467899999998


Q ss_pred             CCCCCHHHHHHHhc------CCcEEEEcCcccCc-----------hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        116 HLGLSEDSEQLIKS------KVNIIFHCAASLRF-----------DEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       116 ~~~~~~~~~~~~~~------~~d~vi~~aa~~~~-----------~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                            +++..+++      ++|++||+||....           .+.++..+++|+.++.++++++.+.
T Consensus        52 ------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  115 (242)
T 1uay_A           52 ------EDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWA  115 (242)
T ss_dssp             ------HHHHHHHHHHHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             ------HHHHHHHHHHHhhCCceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                  67777765      78999999997532           1278889999999999999988653

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.60  E-value=1.1e-14  Score=111.13  Aligned_cols=119  Identities=15%  Similarity=0.131  Sum_probs=88.5

Q ss_pred             CCCceEEEecCC--cchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         34 YRDGQILVTGGT--GFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        34 ~~~~~vlVtG~~--G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      +++|+++||||+  |+||.++++.|++.|   ++|++++|+..   ..+.+.++...             .....++.+|
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G---~~V~~~~r~~~---~~~~~~~l~~~-------------~~~~~~~~~D   67 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREG---AELAFTYQNDK---LKGRVEEFAAQ-------------LGSDIVLQCD   67 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTT---CEEEEEESSTT---THHHHHHHHHH-------------TTCCCEEECC
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCC---CEEEEEcCcHH---HHHHHHHHHHh-------------cCCcEEEEcc
Confidence            578999999999  999999999999999   68999998762   22333332211             1234788999


Q ss_pred             CCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC------------chHHHHHHHHHhHHHHHHHHHHHHhcC-CC
Q psy17489        112 LESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR------------FDEALQKAIRANLYATKQMLNLAKECV-NL  171 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~------------~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~  171 (177)
                      +++.      +++..+++       ++|++|||||...            ..+.|+..+++|+.++.++++++.+.- +-
T Consensus        68 ~~~~------~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~  141 (265)
T 1qsg_A           68 VAED------ASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPG  141 (265)
T ss_dssp             TTCH------HHHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE
T ss_pred             CCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccC
Confidence            9998      66666654       6899999999753            124677889999999999999997641 11


Q ss_pred             CCceeC
Q psy17489        172 KRFCEL  177 (177)
Q Consensus       172 ~~~v~v  177 (177)
                      .+||++
T Consensus       142 g~iv~i  147 (265)
T 1qsg_A          142 SALLTL  147 (265)
T ss_dssp             EEEEEE
T ss_pred             CEEEEE
Confidence            366653

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.60  E-value=1.5e-14  Score=109.40  Aligned_cols=110  Identities=17%  Similarity=0.203  Sum_probs=85.3

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   ++|++++|+....                          ..+..+.+|+
T Consensus        12 ~l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~--------------------------~~~~~~~~D~   62 (247)
T 1uzm_A           12 PFVSRSVLVTGGNRGIGLAIAQRLAADG---HKVAVTHRGSGAP--------------------------KGLFGVEVDV   62 (247)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSSCCC--------------------------TTSEEEECCT
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCChHHH--------------------------HHhcCeeccC
Confidence            3578999999999999999999999999   6899999875321                          1222478999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCce
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VNLKRFC  175 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v  175 (177)
                      ++.      +++..+++       ++|++|||||....       .+.|+..+++|+.++.++++.+.+.   .+..+||
T Consensus        63 ~~~------~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv  136 (247)
T 1uzm_A           63 TDS------DAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMI  136 (247)
T ss_dssp             TCH------HHHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred             CCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEE
Confidence            987      56665543       68999999997532       4678889999999999999887541   2556787


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       137 ~i  138 (247)
T 1uzm_A          137 FI  138 (247)
T ss_dssp             EE
T ss_pred             EE
Confidence            64

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.60  E-value=4.7e-15  Score=116.34  Aligned_cols=113  Identities=14%  Similarity=0.115  Sum_probs=84.7

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +.+|+++||||+|+||.++++.|++.|   ++|++.+|+...  . +.+.+.+...          ....++.++.+|++
T Consensus         6 l~~k~vlVTGas~gIG~~la~~l~~~G---~~Vv~~~r~~~~--~-~~~~~~l~~~----------~~~~~~~~~~~Dl~   69 (319)
T 3ioy_A            6 FAGRTAFVTGGANGVGIGLVRQLLNQG---CKVAIADIRQDS--I-DKALATLEAE----------GSGPEVMGVQLDVA   69 (319)
T ss_dssp             CTTCEEEEETTTSTHHHHHHHHHHHTT---CEEEEEESCHHH--H-HHHHHHHHHH----------TCGGGEEEEECCTT
T ss_pred             CCCCEEEEcCCchHHHHHHHHHHHHCC---CEEEEEECCHHH--H-HHHHHHHHhc----------CCCCeEEEEECCCC
Confidence            578999999999999999999999999   589999997521  1 1121111110          01126889999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                      +.      +++..+++       ++|+||||||...       ..+.++..+++|+.++.++++.+...
T Consensus        70 ~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  132 (319)
T 3ioy_A           70 SR------EGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPR  132 (319)
T ss_dssp             CH------HHHHHHHHHHHHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CH------HHHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            98      66666654       6799999999743       23677889999999999999987653

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.60  E-value=1.1e-14  Score=108.76  Aligned_cols=115  Identities=17%  Similarity=0.180  Sum_probs=86.6

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +|+++||||+|+||.++++.|++.|   .+|++++|+.      +.+.+....            ...++.++.+|+++.
T Consensus         1 Mk~vlVTGas~gIG~~~a~~l~~~G---~~V~~~~r~~------~~~~~~~~~------------~~~~~~~~~~D~~~~   59 (230)
T 3guy_A            1 MSLIVITGASSGLGAELAKLYDAEG---KATYLTGRSE------SKLSTVTNC------------LSNNVGYRARDLASH   59 (230)
T ss_dssp             --CEEEESTTSHHHHHHHHHHHHTT---CCEEEEESCH------HHHHHHHHT------------CSSCCCEEECCTTCH
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCC---CEEEEEeCCH------HHHHHHHHH------------HhhccCeEeecCCCH
Confidence            3689999999999999999999999   5899999864      333332221            125688999999998


Q ss_pred             CCCCCHHHHHHHhcCC----cEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc--CCCCCceeC
Q psy17489        116 HLGLSEDSEQLIKSKV----NIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC--VNLKRFCEL  177 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~----d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~v  177 (177)
                            +++..+++.+    |++|||||...       ..+.++..+++|+.++.++++.+...  ....++|++
T Consensus        60 ------~~v~~~~~~~~~~~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~i  128 (230)
T 3guy_A           60 ------QEVEQLFEQLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMI  128 (230)
T ss_dssp             ------HHHHHHHHSCSSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEE
T ss_pred             ------HHHHHHHHHHhhcCCEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE
Confidence                  7888887754    89999999753       24678889999999999999988653  111266653

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.60  E-value=1.3e-14  Score=111.12  Aligned_cols=122  Identities=13%  Similarity=0.120  Sum_probs=86.3

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      +.++|+++||||+|+||.++++.|++.|   ++|++..++..  ...+.+.+....            ...++.++.+|+
T Consensus        23 m~~~k~vlITGas~gIG~a~a~~l~~~G---~~V~~~~~~~~--~~~~~~~~~~~~------------~~~~~~~~~~Dl   85 (272)
T 4e3z_A           23 MSDTPVVLVTGGSRGIGAAVCRLAARQG---WRVGVNYAANR--EAADAVVAAITE------------SGGEAVAIPGDV   85 (272)
T ss_dssp             -CCSCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSCH--HHHHHHHHHHHH------------TTCEEEEEECCT
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEcCCCh--hHHHHHHHHHHh------------cCCcEEEEEcCC
Confidence            4567899999999999999999999999   57776643321  111222221111            235788999999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHhc------CCC
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKEC------VNL  171 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~~------~~~  171 (177)
                      ++.      +++..+++       ++|+||||||...        ..+.++..+++|+.++.++++.+...      ++.
T Consensus        86 ~~~------~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~  159 (272)
T 4e3z_A           86 GNA------ADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQG  159 (272)
T ss_dssp             TCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCC
T ss_pred             CCH------HHHHHHHHHHHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCC
Confidence            998      56665544       7899999999753        24667889999999999999887653      123


Q ss_pred             CCceeC
Q psy17489        172 KRFCEL  177 (177)
Q Consensus       172 ~~~v~v  177 (177)
                      .+||++
T Consensus       160 g~iv~i  165 (272)
T 4e3z_A          160 GAIVNV  165 (272)
T ss_dssp             EEEEEE
T ss_pred             CEEEEE
Confidence            467763

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.60  E-value=1.7e-14  Score=109.69  Aligned_cols=121  Identities=12%  Similarity=0.128  Sum_probs=88.3

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|+..      ........     +..  .....++.++.+|++
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~------~~~~~~~~-----~~~--~~~~~~~~~~~~D~~   68 (260)
T 2z1n_A            5 IQGKLAVVTAGSSGLGFASALELARNG---ARLLLFSRNRE------KLEAAASR-----IAS--LVSGAQVDIVAGDIR   68 (260)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHH------HHHHHHHH-----HHH--HSTTCCEEEEECCTT
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHH------HHHHHHHH-----HHh--cCCCCeEEEEEccCC
Confidence            578999999999999999999999999   68999998642      22211110     000  000126889999999


Q ss_pred             CCCCCCCHHHHHHHhc------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCcee
Q psy17489        114 SEHLGLSEDSEQLIKS------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAK----ECVNLKRFCE  176 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~  176 (177)
                      +.      +++..+++      ++|++|||||...       ..+.|+..+++|+.++.++.+.+.    +. +..+||+
T Consensus        69 ~~------~~v~~~~~~~~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~  141 (260)
T 2z1n_A           69 EP------GDIDRLFEKARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEK-GWGRMVY  141 (260)
T ss_dssp             CH------HHHHHHHHHHHHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHH-TCEEEEE
T ss_pred             CH------HHHHHHHHHHHHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEE
Confidence            98      67776665      5999999999643       245788899999999988877764    33 5567776


Q ss_pred             C
Q psy17489        177 L  177 (177)
Q Consensus       177 v  177 (177)
                      +
T Consensus       142 i  142 (260)
T 2z1n_A          142 I  142 (260)
T ss_dssp             E
T ss_pred             E
Confidence            4

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.60  E-value=6.5e-15  Score=110.70  Aligned_cols=108  Identities=19%  Similarity=0.278  Sum_probs=83.0

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      ++|+++||||+|+||.++++.|++.|. .++|++++|+....   +.+.+             .  ...++.++.+|+++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~-~~~V~~~~r~~~~~---~~l~~-------------~--~~~~~~~~~~D~~~   62 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKN-IRHIIATARDVEKA---TELKS-------------I--KDSRVHVLPLTVTC   62 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTT-CCEEEEEESSGGGC---HHHHT-------------C--CCTTEEEEECCTTC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCC-CcEEEEEecCHHHH---HHHHh-------------c--cCCceEEEEeecCC
Confidence            578999999999999999999999981 13889999875322   11111             0  12578999999999


Q ss_pred             CCCCCCHHHHHHHhc---------CCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        115 EHLGLSEDSEQLIKS---------KVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~---------~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      .      +++..+++         ++|+||||||...        ..+.++..+++|+.++.++++++..
T Consensus        63 ~------~~~~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~  126 (250)
T 1yo6_A           63 D------KSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLP  126 (250)
T ss_dssp             H------HHHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHH
T ss_pred             H------HHHHHHHHHHHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            7      56666655         8999999999754        2466788999999999999888654

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.59  E-value=1.2e-14  Score=113.90  Aligned_cols=128  Identities=12%  Similarity=0.092  Sum_probs=92.0

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCC------ChHHHHHHHHhhhhhhcccccCcccCCCe
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGS------SPEERVKNMLNSVIFDRLNKEVPDFRSKI  105 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  105 (177)
                      ..+++|+++||||+|+||.++++.|++.|   ++|++++|+....      ...+.+.+....         ......++
T Consensus        42 ~~l~gk~~lVTGas~GIG~aia~~la~~G---~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~  109 (317)
T 3oec_A           42 NRLQGKVAFITGAARGQGRTHAVRLAQDG---ADIVAIDLCRQQPNLDYAQGSPEELKETVRL---------VEEQGRRI  109 (317)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEECCCCCTTCCSCCCCHHHHHHHHHH---------HHHTTCCE
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCC---CeEEEEecccccccccccccCHHHHHHHHHH---------HHhcCCeE
Confidence            34688999999999999999999999999   6899988763211      112333322211         01123578


Q ss_pred             EEEeCCCCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---
Q psy17489        106 QVIPSNLESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---  168 (177)
Q Consensus       106 ~~~~~D~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---  168 (177)
                      .++.+|+++.      +++..+++       ++|++|||||...       ..+.|+..+++|+.++.++++++...   
T Consensus       110 ~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~  183 (317)
T 3oec_A          110 IARQADVRDL------ASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIE  183 (317)
T ss_dssp             EEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence            9999999998      66666554       7999999999753       24678889999999999999987542   


Q ss_pred             -CCCCCceeC
Q psy17489        169 -VNLKRFCEL  177 (177)
Q Consensus       169 -~~~~~~v~v  177 (177)
                       +...+||++
T Consensus       184 ~~~~g~Iv~i  193 (317)
T 3oec_A          184 RGQGGSVIFV  193 (317)
T ss_dssp             TCSCEEEEEE
T ss_pred             cCCCCEEEEE
Confidence             123456653

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.59  E-value=2e-14  Score=111.40  Aligned_cols=122  Identities=18%  Similarity=0.108  Sum_probs=88.6

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   ++|++++|+...  . +.+.+.+..           ....++.++.+|+
T Consensus        23 ~l~~k~vlITGasggiG~~la~~L~~~G---~~V~~~~r~~~~--~-~~~~~~l~~-----------~~~~~~~~~~~Dl   85 (302)
T 1w6u_A           23 SFQGKVAFITGGGTGLGKGMTTLLSSLG---AQCVIASRKMDV--L-KATAEQISS-----------QTGNKVHAIQCDV   85 (302)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH--H-HHHHHHHHH-----------HHSSCEEEEECCT
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHHH-----------hcCCceEEEEeCC
Confidence            4678999999999999999999999999   689999986421  1 111111110           0125788999999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc----CCCCCc
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC----VNLKRF  174 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~  174 (177)
                      ++.      +++..+++       ++|+||||||...       ..+.++..+++|+.++.++++.+.+.    .+..+|
T Consensus        86 ~~~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~i  159 (302)
T 1w6u_A           86 RDP------DMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAF  159 (302)
T ss_dssp             TCH------HHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEE
Confidence            997      66666554       5799999999642       24567889999999999998887542    244677


Q ss_pred             eeC
Q psy17489        175 CEL  177 (177)
Q Consensus       175 v~v  177 (177)
                      |++
T Consensus       160 v~i  162 (302)
T 1w6u_A          160 LSI  162 (302)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            763

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.59  E-value=6.2e-15  Score=112.82  Aligned_cols=109  Identities=16%  Similarity=0.198  Sum_probs=84.2

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   ++|++.+|+....                          .....+.+|+
T Consensus        25 ~l~gk~vlVTGas~gIG~aia~~la~~G---~~V~~~~r~~~~~--------------------------~~~~~~~~Dv   75 (266)
T 3uxy_A           25 GFEGKVALVTGAAGGIGGAVVTALRAAG---ARVAVADRAVAGI--------------------------AADLHLPGDL   75 (266)
T ss_dssp             -CTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEECSSCCTTS--------------------------CCSEECCCCT
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHH--------------------------HhhhccCcCC
Confidence            4678999999999999999999999999   6899988865321                          1224457899


Q ss_pred             CCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHH----HhcCCCCCc
Q psy17489        113 ESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLA----KECVNLKRF  174 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~  174 (177)
                      ++.      +.+..++       .++|++|||||...       ..+.|+..+++|+.++.++++++    ++. +..++
T Consensus        76 ~~~------~~~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~i  148 (266)
T 3uxy_A           76 REA------AYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAA-GGGAI  148 (266)
T ss_dssp             TSH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEE
T ss_pred             CCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEE
Confidence            987      4554443       37999999999754       24678889999999999999987    343 45677


Q ss_pred             eeC
Q psy17489        175 CEL  177 (177)
Q Consensus       175 v~v  177 (177)
                      |++
T Consensus       149 v~i  151 (266)
T 3uxy_A          149 VNV  151 (266)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            764

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.59  E-value=3.1e-15  Score=115.19  Aligned_cols=96  Identities=18%  Similarity=0.239  Sum_probs=80.9

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      ..++|+||||+||||+++++.|++.|   ++|++++|+                                    .+|+.+
T Consensus        11 ~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~------------------------------------~~Dl~d   51 (292)
T 1vl0_A           11 HHMKILITGANGQLGREIQKQLKGKN---VEVIPTDVQ------------------------------------DLDITN   51 (292)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHHTTSS---EEEEEECTT------------------------------------TCCTTC
T ss_pred             ccceEEEECCCChHHHHHHHHHHhCC---CeEEeccCc------------------------------------cCCCCC
Confidence            35799999999999999999999998   689988773                                    257777


Q ss_pred             CCCCCCHHHHHHHhc--CCcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        115 EHLGLSEDSEQLIKS--KVNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~--~~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      .      +.+..+++  ++|+|||+||....   ..++..++++|+.++.+++++|.+. ++ ||||+
T Consensus        52 ~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~-~iv~~  111 (292)
T 1vl0_A           52 V------LAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSV-GA-EIVQI  111 (292)
T ss_dssp             H------HHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH-TC-EEEEE
T ss_pred             H------HHHHHHHHhcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEe
Confidence            6      67888887  79999999998653   2456778999999999999999998 66 88874

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.59  E-value=1.8e-14  Score=110.11  Aligned_cols=124  Identities=19%  Similarity=0.182  Sum_probs=89.6

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      ..+++|+++||||+|+||.++++.|++.|   ++|++.+|+...  .++...++...           .....+.++.+|
T Consensus         6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~--~~~~~~~l~~~-----------~~~~~~~~~~~D   69 (267)
T 3t4x_A            6 MQLKGKTALVTGSTAGIGKAIATSLVAEG---ANVLINGRREEN--VNETIKEIRAQ-----------YPDAILQPVVAD   69 (267)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSHHH--HHHHHHHHHHH-----------CTTCEEEEEECC
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHH--HHHHHHHHHhh-----------CCCceEEEEecC
Confidence            34678999999999999999999999999   689999987521  11111111110           012457788999


Q ss_pred             CCCCCCCCCHHHHHHHhc---CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCceeC
Q psy17489        112 LESEHLGLSEDSEQLIKS---KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VNLKRFCEL  177 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~---~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~v  177 (177)
                      +++.      +.+..+++   ++|++|||||....       .++|+..+++|+.++.++.+.+.+.   .+..++|++
T Consensus        70 ~~~~------~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~i  142 (267)
T 3t4x_A           70 LGTE------QGCQDVIEKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFI  142 (267)
T ss_dssp             TTSH------HHHHHHHHHCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEE
T ss_pred             CCCH------HHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence            9997      66666654   79999999997532       4678889999999988887776432   145677764

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.59  E-value=6.7e-15  Score=112.02  Aligned_cols=111  Identities=18%  Similarity=0.073  Sum_probs=85.7

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .++||+++||||+++||.++++.|++.|   ++|++.+|+++  ..++...++..             ...++..+.+|+
T Consensus         6 ~L~gKvalVTGas~GIG~aia~~la~~G---a~Vvi~~~~~~--~~~~~~~~l~~-------------~g~~~~~~~~Dv   67 (255)
T 4g81_D            6 DLTGKTALVTGSARGLGFAYAEGLAAAG---ARVILNDIRAT--LLAESVDTLTR-------------KGYDAHGVAFDV   67 (255)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEECCSCHH--HHHHHHHHHHH-------------TTCCEEECCCCT
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHH--HHHHHHHHHHh-------------cCCcEEEEEeeC
Confidence            4789999999999999999999999999   69999888642  11111121111             235788999999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      +++      ++++.+++       ++|++|||||...       ..++|+..+++|+.+++.+.+.+.+
T Consensus        68 ~~~------~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p  130 (255)
T 4g81_D           68 TDE------LAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAK  130 (255)
T ss_dssp             TCH------HHHHHHHHHHHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCH------HHHHHHHHHHHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            998      56665543       6899999999754       2578999999999999999887643

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.59  E-value=1.4e-14  Score=111.61  Aligned_cols=121  Identities=16%  Similarity=0.214  Sum_probs=89.0

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      ..+++|+++||||+|+||.++++.|++.|   .+|++.+|+...  . +.+.+.+.            ....++.++.+|
T Consensus        40 ~~l~~k~vlITGasggIG~~la~~L~~~G---~~V~~~~r~~~~--~-~~~~~~l~------------~~~~~~~~~~~D  101 (285)
T 2c07_A           40 YCGENKVALVTGAGRGIGREIAKMLAKSV---SHVICISRTQKS--C-DSVVDEIK------------SFGYESSGYAGD  101 (285)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTS---SEEEEEESSHHH--H-HHHHHHHH------------TTTCCEEEEECC
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHcC---CEEEEEcCCHHH--H-HHHHHHHH------------hcCCceeEEECC
Confidence            34678999999999999999999999998   688887775411  1 11111111            012568899999


Q ss_pred             CCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh----cCCCCC
Q psy17489        112 LESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE----CVNLKR  173 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~  173 (177)
                      +++.      +++..++       .++|+||||||...       ..+.++..+++|+.++.++++.+.+    . +..+
T Consensus       102 l~d~------~~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~~  174 (285)
T 2c07_A          102 VSKK------EEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINN-RYGR  174 (285)
T ss_dssp             TTCH------HHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH-TCEE
T ss_pred             CCCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCCE
Confidence            9998      6666665       36899999999753       2467788999999998888887753    3 5578


Q ss_pred             ceeC
Q psy17489        174 FCEL  177 (177)
Q Consensus       174 ~v~v  177 (177)
                      ||++
T Consensus       175 iv~i  178 (285)
T 2c07_A          175 IINI  178 (285)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            8764

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.59  E-value=1.6e-14  Score=111.36  Aligned_cols=119  Identities=15%  Similarity=0.172  Sum_probs=89.7

Q ss_pred             CCCceEEEecCC--cchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         34 YRDGQILVTGGT--GFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        34 ~~~~~vlVtG~~--G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      +++|+++||||+  |+||.++++.|++.|   ++|++++|+..   ..+.+.++...             .+++.++.+|
T Consensus        19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G---~~V~~~~r~~~---~~~~~~~l~~~-------------~~~~~~~~~D   79 (285)
T 2p91_A           19 LEGKRALITGVANERSIAYGIAKSFHREG---AQLAFTYATPK---LEKRVREIAKG-------------FGSDLVVKCD   79 (285)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTT---CEEEEEESSGG---GHHHHHHHHHH-------------TTCCCEEECC
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcC---CEEEEEeCCHH---HHHHHHHHHHh-------------cCCeEEEEcC
Confidence            678999999999  999999999999999   68999998752   22333332211             1246789999


Q ss_pred             CCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-----------hHHHHHHHHHhHHHHHHHHHHHHhcC--CC
Q psy17489        112 LESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-----------DEALQKAIRANLYATKQMLNLAKECV--NL  171 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-----------~~~~~~~~~~nv~~~~~ll~~~~~~~--~~  171 (177)
                      +++.      +++..+++       ++|++|||||....           .+.++..+++|+.++.++++.+...-  +.
T Consensus        80 l~~~------~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~  153 (285)
T 2p91_A           80 VSLD------EDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRN  153 (285)
T ss_dssp             TTCH------HHHHHHHHHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSC
T ss_pred             CCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC
Confidence            9998      66666554       78999999997531           35677899999999999999987641  12


Q ss_pred             CCceeC
Q psy17489        172 KRFCEL  177 (177)
Q Consensus       172 ~~~v~v  177 (177)
                      .+||++
T Consensus       154 g~iv~i  159 (285)
T 2p91_A          154 GAIVTL  159 (285)
T ss_dssp             CEEEEE
T ss_pred             CEEEEE
Confidence            577764

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.59  E-value=2.1e-15  Score=119.40  Aligned_cols=112  Identities=23%  Similarity=0.267  Sum_probs=84.0

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +.+|+|+||||+||||+++++.|++.|.  ..|++++|+......    .                 ...++. +.+|+.
T Consensus        44 ~~~~~vlVtGatG~iG~~l~~~L~~~g~--~~V~~~~r~~~~~~~----~-----------------~~~~~~-~~~d~~   99 (357)
T 2x6t_A           44 IEGRMIIVTGGAGFIGSNIVKALNDKGI--TDILVVDNLKDGTKF----V-----------------NLVDLN-IADYMD   99 (357)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTC--CCEEEEECCSSGGGG----G-----------------GTTTSC-CSEEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC--cEEEEEecCCCcchh----h-----------------cccCce-EeeecC
Confidence            4578999999999999999999999983  478888886532100    0                 011223 667888


Q ss_pred             CCCCCCCHHHHHHHhc-----CCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        114 SEHLGLSEDSEQLIKS-----KVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-----~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      +.      +.+..+++     ++|+|||+||.... ..+++.++++|+.++.+++++|.+. ++ +|||+
T Consensus       100 ~~------~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~-~~-r~V~~  161 (357)
T 2x6t_A          100 KE------DFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYA  161 (357)
T ss_dssp             HH------HHHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TC-CEEEE
T ss_pred             cH------HHHHHHHhhcccCCCCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEE
Confidence            76      67777776     59999999997653 3456778999999999999999998 77 99884

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.59  E-value=1e-14  Score=113.09  Aligned_cols=127  Identities=18%  Similarity=0.262  Sum_probs=89.6

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      ..+++|+++||||+|+||.++++.|++.|   ++|++++|+..      .+...... .....   ......++.++.+|
T Consensus        14 ~~l~~k~vlVTGasggIG~~la~~l~~~G---~~V~~~~r~~~------~~~~~~~~-l~~~~---~~~~~~~~~~~~~D   80 (303)
T 1yxm_A           14 GLLQGQVAIVTGGATGIGKAIVKELLELG---SNVVIASRKLE------RLKSAADE-LQANL---PPTKQARVIPIQCN   80 (303)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHH------HHHHHHHH-HHHTS---CTTCCCCEEEEECC
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHH------HHHHHHHH-HHhhc---cccCCccEEEEecC
Confidence            34678999999999999999999999999   68999998642      22211110 00000   00013578999999


Q ss_pred             CCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCc
Q psy17489        112 LESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRF  174 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~  174 (177)
                      +++.      +++..+++       ++|+||||||...       ..+.++..+++|+.++.++++++...   .+..+|
T Consensus        81 ~~~~------~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~i  154 (303)
T 1yxm_A           81 IRNE------EEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSI  154 (303)
T ss_dssp             TTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEE
T ss_pred             CCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeE
Confidence            9998      66666654       5999999999642       23567788999999999999987652   123566


Q ss_pred             eeC
Q psy17489        175 CEL  177 (177)
Q Consensus       175 v~v  177 (177)
                      |++
T Consensus       155 v~i  157 (303)
T 1yxm_A          155 VNI  157 (303)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            653

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.59  E-value=1.7e-14  Score=108.06  Aligned_cols=110  Identities=15%  Similarity=0.181  Sum_probs=84.2

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      ++|+++||||+|+||.++++.|++.|   .+|++.+|+..      ++.+......        .....++.++.+|+++
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G---~~V~~~~r~~~------~~~~~~~~~~--------~~~~~~~~~~~~D~~~   63 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDG---YALALGARSVD------RLEKIAHELM--------QEQGVEVFYHHLDVSK   63 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCHH------HHHHHHHHHH--------HHHCCCEEEEECCTTC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHH------HHHHHHHHHH--------hhcCCeEEEEEeccCC
Confidence            36899999999999999999999999   58999998652      2222111100        0023578999999999


Q ss_pred             CCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        115 EHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      .      +++..+++       ++|++|||||...       ..++++..+++|+.++.++++.+..
T Consensus        64 ~------~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  124 (235)
T 3l77_A           64 A------ESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLD  124 (235)
T ss_dssp             H------HHHHHHCC-HHHHHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             H------HHHHHHHHHHHHhcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8      67777655       7899999999753       2467888999999999999998754

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.59  E-value=1.4e-14  Score=110.59  Aligned_cols=121  Identities=12%  Similarity=0.108  Sum_probs=87.1

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+.+|+++||||+|+||.++++.|++.|   .+|+++.++.. ...++.......             ...++.++.+|+
T Consensus        23 ~l~~k~vlVTGas~gIG~~la~~l~~~G---~~v~i~~~r~~-~~~~~~~~~l~~-------------~~~~~~~~~~Dl   85 (267)
T 4iiu_A           23 NAMSRSVLVTGASKGIGRAIARQLAADG---FNIGVHYHRDA-AGAQETLNAIVA-------------NGGNGRLLSFDV   85 (267)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSCH-HHHHHHHHHHHH-------------TTCCEEEEECCT
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCch-HHHHHHHHHHHh-------------cCCceEEEEecC
Confidence            3568999999999999999999999999   57766654431 111111221111             235789999999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHH-----hcCCCCC
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAK-----ECVNLKR  173 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~-----~~~~~~~  173 (177)
                      ++.      +++..+++       ++|++|||||...       ..++++..+++|+.++.++++.+.     +. +..+
T Consensus        86 ~~~------~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~g~  158 (267)
T 4iiu_A           86 ANR------EQCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGAR-QGGR  158 (267)
T ss_dssp             TCH------HHHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SCEE
T ss_pred             CCH------HHHHHHHHHHHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCcE
Confidence            998      66666554       7999999999753       246788899999999999998863     33 4567


Q ss_pred             ceeC
Q psy17489        174 FCEL  177 (177)
Q Consensus       174 ~v~v  177 (177)
                      ||++
T Consensus       159 iv~i  162 (267)
T 4iiu_A          159 IITL  162 (267)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            7764

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.59  E-value=1.5e-14  Score=111.24  Aligned_cols=118  Identities=20%  Similarity=0.325  Sum_probs=87.5

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|+.      +.+.+....     +    ... .++.++.+|++
T Consensus        27 l~~k~vlVTGas~gIG~aia~~L~~~G---~~V~~~~r~~------~~~~~~~~~-----l----~~~-~~~~~~~~Dv~   87 (276)
T 2b4q_A           27 LAGRIALVTGGSRGIGQMIAQGLLEAG---ARVFICARDA------EACADTATR-----L----SAY-GDCQAIPADLS   87 (276)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEECSCH------HHHHHHHHH-----H----TTS-SCEEECCCCTT
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCH------HHHHHHHHH-----H----Hhc-CceEEEEeeCC
Confidence            578999999999999999999999999   6899998864      222221111     0    001 26888999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh----cCCC----
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE----CVNL----  171 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~----  171 (177)
                      +.      +++..+++       ++|++|||||...       ..+.|+..+++|+.++.++++.+..    . +.    
T Consensus        88 d~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~~~~~  160 (276)
T 2b4q_A           88 SE------AGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRS-ASAENP  160 (276)
T ss_dssp             SH------HHHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHH-CCSSSC
T ss_pred             CH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-cCCCCC
Confidence            98      66666554       7999999999643       2467888999999999988887643    2 32    


Q ss_pred             CCceeC
Q psy17489        172 KRFCEL  177 (177)
Q Consensus       172 ~~~v~v  177 (177)
                      .+||++
T Consensus       161 g~iV~i  166 (276)
T 2b4q_A          161 ARVINI  166 (276)
T ss_dssp             EEEEEE
T ss_pred             CEEEEE
Confidence            677764

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.59  E-value=1.7e-15  Score=114.28  Aligned_cols=104  Identities=13%  Similarity=0.103  Sum_probs=82.5

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+++||||+|+||+++++.|++.|   ++|++++|+....                          ..  .+.+|+.+. 
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g---~~V~~~~r~~~~~--------------------------~~--~~~~D~~~~-   49 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAG---HTVIGIDRGQADI--------------------------EA--DLSTPGGRE-   49 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSSSSE--------------------------EC--CTTSHHHHH-
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCC---CEEEEEeCChhHc--------------------------cc--cccCCcccH-
Confidence            689999999999999999999999   6899999975321                          00  156788876 


Q ss_pred             CCCCHHHHHHHhc----CCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCceeC
Q psy17489        117 LGLSEDSEQLIKS----KVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKEC---VNLKRFCEL  177 (177)
Q Consensus       117 ~~~~~~~~~~~~~----~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~v  177 (177)
                           +.+..+++    ++|+|||+||......+++..+++|+.++.++++++.+.   .+.++||++
T Consensus        50 -----~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~  112 (255)
T 2dkn_A           50 -----TAVAAVLDRCGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIV  112 (255)
T ss_dssp             -----HHHHHHHHHHTTCCSEEEECCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEE
T ss_pred             -----HHHHHHHHHcCCCccEEEECCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEE
Confidence                 66777665    899999999986534568889999999999999987653   256788874

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.59  E-value=1.6e-14  Score=108.91  Aligned_cols=118  Identities=10%  Similarity=0.087  Sum_probs=86.5

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +|+++||||+|+||.++++.|++.|   ++|++++|+.      +.+......     +.   .....++.++.+|+++.
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G---~~V~~~~r~~------~~~~~~~~~-----~~---~~~~~~~~~~~~D~~~~   64 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARG---DRVAALDLSA------ETLEETART-----HW---HAYADKVLRVRADVADE   64 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHHH-----HS---TTTGGGEEEEECCTTCH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCH------HHHHHHHHH-----HH---HhcCCcEEEEEecCCCH
Confidence            6899999999999999999999999   5899999864      222221111     00   00124688999999998


Q ss_pred             CCCCCHHHHHHHhc-------CCcEEEEcCcccCc----------hHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCc
Q psy17489        116 HLGLSEDSEQLIKS-------KVNIIFHCAASLRF----------DEALQKAIRANLYATKQMLNLAK----ECVNLKRF  174 (177)
Q Consensus       116 ~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~----------~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~  174 (177)
                            +++..+++       ++|+||||||....          .+.++..+++|+.++.++++.+.    +. +.++|
T Consensus        65 ------~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~i  137 (250)
T 2cfc_A           65 ------GDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQ-GAGVI  137 (250)
T ss_dssp             ------HHHHHHHHHHHHHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEE
T ss_pred             ------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCCEE
Confidence                  66766654       79999999996431          35677889999999988877664    33 56778


Q ss_pred             eeC
Q psy17489        175 CEL  177 (177)
Q Consensus       175 v~v  177 (177)
                      |++
T Consensus       138 v~i  140 (250)
T 2cfc_A          138 VNI  140 (250)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            764

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.59  E-value=7e-15  Score=114.18  Aligned_cols=110  Identities=19%  Similarity=0.369  Sum_probs=85.1

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +|+|+||||+|++|+++++.|++.|   .+|++++|+...... ++...+..      +      ...++.++.+|+.+.
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~~-~~~~~~~~------~------~~~~~~~~~~D~~d~   67 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLG---HPTYVLFRPEVVSNI-DKVQMLLY------F------KQLGAKLIEASLDDH   67 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTT---CCEEEECCSCCSSCH-HHHHHHHH------H------HTTTCEEECCCSSCH
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCC---CcEEEEECCCcccch-hHHHHHHH------H------HhCCeEEEeCCCCCH
Confidence            5789999999999999999999998   589999997643211 11111100      0      014688999999998


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCC-CCCcee
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVN-LKRFCE  176 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~~~v~  176 (177)
                            +++..+++++|+|||+++.....        .|+.++.+++++|++. + ++|||+
T Consensus        68 ------~~l~~~~~~~d~vi~~a~~~~~~--------~~~~~~~~l~~aa~~~-g~v~~~v~  114 (313)
T 1qyd_A           68 ------QRLVDALKQVDVVISALAGGVLS--------HHILEQLKLVEAIKEA-GNIKRFLP  114 (313)
T ss_dssp             ------HHHHHHHTTCSEEEECCCCSSSS--------TTTTTHHHHHHHHHHS-CCCSEEEC
T ss_pred             ------HHHHHHHhCCCEEEECCccccch--------hhHHHHHHHHHHHHhc-CCCceEEe
Confidence                  78999999999999999975431        3677889999999998 6 999985

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.59  E-value=1.9e-14  Score=110.31  Aligned_cols=116  Identities=14%  Similarity=0.129  Sum_probs=81.1

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEe-CCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR-DKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++| +..  .. +.+.+.+..           ....++.++.+|+
T Consensus         9 ~~~k~~lVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~--~~-~~~~~~~~~-----------~~~~~~~~~~~Dl   71 (276)
T 1mxh_A            9 SECPAAVITGGARRIGHSIAVRLHQQG---FRVVVHYRHSEG--AA-QRLVAELNA-----------ARAGSAVLCKGDL   71 (276)
T ss_dssp             --CCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHH--HH-HHHHHHHHH-----------HSTTCEEEEECCC
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCChH--HH-HHHHHHHHH-----------hcCCceEEEeccC
Confidence            468999999999999999999999999   68999998 431  11 111111110           0024688999999


Q ss_pred             CCCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc-------h-----------HHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        113 ESEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF-------D-----------EALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~-----------~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      ++...  ..+.+..++       .++|++|||||....       .           +.|+..+++|+.++.++++.+.+
T Consensus        72 ~~~~~--~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  149 (276)
T 1mxh_A           72 SLSSS--LLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFAR  149 (276)
T ss_dssp             SSSTT--HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCccc--cHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHH
Confidence            98710  001333333       379999999997432       2           67788999999999999999877


Q ss_pred             c
Q psy17489        168 C  168 (177)
Q Consensus       168 ~  168 (177)
                      .
T Consensus       150 ~  150 (276)
T 1mxh_A          150 R  150 (276)
T ss_dssp             T
T ss_pred             H
Confidence            4

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.59  E-value=1.5e-14  Score=109.83  Aligned_cols=118  Identities=16%  Similarity=0.113  Sum_probs=86.8

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +|+++||||+|+||.++++.|++.|   ++|++++|+...  . +.+.+.+..            ...++.++.+|+++.
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~--~-~~~~~~~~~------------~~~~~~~~~~D~~~~   63 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDG---FAVAIADYNDAT--A-KAVASEINQ------------AGGHAVAVKVDVSDR   63 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH--H-HHHHHHHHH------------TTCCEEEEECCTTSH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHHh------------cCCcEEEEEecCCCH
Confidence            5899999999999999999999999   689999886421  1 111111110            124688999999998


Q ss_pred             CCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CC-CCCceeC
Q psy17489        116 HLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VN-LKRFCEL  177 (177)
Q Consensus       116 ~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~-~~~~v~v  177 (177)
                            +++..+++       ++|++|||||...       ..+.|+..+++|+.++.++++.+.+.   .+ ..+||++
T Consensus        64 ------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~i  137 (256)
T 1geg_A           64 ------DQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINA  137 (256)
T ss_dssp             ------HHHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEE
T ss_pred             ------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence                  66666654       7999999999643       24677889999999999988876542   13 4577763

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.59  E-value=2.6e-14  Score=108.26  Aligned_cols=104  Identities=14%  Similarity=0.223  Sum_probs=83.2

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +|+++||||+++||.++++.|++.|   ++|++.+|++      +...+..+             ...++.++++|++++
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~G---a~V~~~~~~~------~~~~~~~~-------------~~~~~~~~~~Dv~~~   59 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAG---DKVCFIDIDE------KRSADFAK-------------ERPNLFYFHGDVADP   59 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHT-------------TCTTEEEEECCTTSH
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCC---CEEEEEeCCH------HHHHHHHH-------------hcCCEEEEEecCCCH
Confidence            5899999999999999999999999   6999999864      33333222             235788999999998


Q ss_pred             CCCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        116 HLGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       116 ~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                            ++++.++       .++|++|||||....       .++|+..+++|+.+++.+.+.+.+
T Consensus        60 ------~~v~~~v~~~~~~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~  119 (247)
T 3ged_A           60 ------LTLKKFVEYAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRD  119 (247)
T ss_dssp             ------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             ------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence                  5555543       479999999997542       478899999999999999887754

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.59  E-value=8.7e-15  Score=110.42  Aligned_cols=119  Identities=17%  Similarity=0.123  Sum_probs=87.5

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   ++|++++|+..      ........     +    . ...++.++.+|+
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G---~~V~~~~r~~~------~~~~~~~~-----~----~-~~~~~~~~~~D~   63 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEG---AKVMITGRHSD------VGEKAAKS-----V----G-TPDQIQFFQHDS   63 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHH------HHHHHHHH-----H----C-CTTTEEEEECCT
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCHH------HHHHHHHH-----h----h-ccCceEEEECCC
Confidence            3578999999999999999999999999   68999998642      22221110     0    0 014688999999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHH----hcCCC-CC
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAK----ECVNL-KR  173 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~-~~  173 (177)
                      ++.      +++..+++       ++|+||||||...       ..+.++..+++|+.++.++.+.+.    +. +. ++
T Consensus        64 ~~~------~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~~~~  136 (251)
T 1zk4_A           64 SDE------DGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNK-GLGAS  136 (251)
T ss_dssp             TCH------HHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS-SSCEE
T ss_pred             CCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc-CCCCE
Confidence            997      56666554       5999999999643       245678899999999888777654    33 44 67


Q ss_pred             ceeC
Q psy17489        174 FCEL  177 (177)
Q Consensus       174 ~v~v  177 (177)
                      ||++
T Consensus       137 iv~i  140 (251)
T 1zk4_A          137 IINM  140 (251)
T ss_dssp             EEEE
T ss_pred             EEEe
Confidence            8764

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.59  E-value=9.4e-15  Score=111.50  Aligned_cols=120  Identities=12%  Similarity=0.071  Sum_probs=88.4

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|+.. ... +.+.+.+..            ...++.++.+|++
T Consensus        19 ~~~k~vlItGasggiG~~la~~l~~~G---~~v~~~~r~~~-~~~-~~~~~~l~~------------~~~~~~~~~~D~~   81 (274)
T 1ja9_A           19 LAGKVALTTGAGRGIGRGIAIELGRRG---ASVVVNYGSSS-KAA-EEVVAELKK------------LGAQGVAIQADIS   81 (274)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSCH-HHH-HHHHHHHHH------------TTCCEEEEECCTT
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEcCCch-HHH-HHHHHHHHh------------cCCcEEEEEecCC
Confidence            578999999999999999999999999   58999888431 111 111111110            1356889999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc--CCCCCceeC
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC--VNLKRFCEL  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~v  177 (177)
                      +.      +.+..+++       ++|+|||+||...       ..+.++..+++|+.++.++++++.+.  .+ .+||++
T Consensus        82 ~~------~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~  154 (274)
T 1ja9_A           82 KP------SEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILT  154 (274)
T ss_dssp             SH------HHHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEE
Confidence            98      66766655       7999999999753       23567788999999999999988764  12 467663

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.59  E-value=3.8e-14  Score=108.22  Aligned_cols=123  Identities=14%  Similarity=0.126  Sum_probs=89.0

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   ++|++.+|+...  . +...+.+..        .  ....++.++.+|+
T Consensus         5 ~l~~k~~lVTGas~GIG~aia~~l~~~G---~~V~~~~r~~~~--~-~~~~~~l~~--------~--~~~~~~~~~~~Dv   68 (265)
T 3lf2_A            5 DLSEAVAVVTGGSSGIGLATVELLLEAG---AAVAFCARDGER--L-RAAESALRQ--------R--FPGARLFASVCDV   68 (265)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESCHHH--H-HHHHHHHHH--------H--STTCCEEEEECCT
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHHHHHH--------h--cCCceEEEEeCCC
Confidence            3678999999999999999999999999   689999986421  1 111111110        0  0123588999999


Q ss_pred             CCCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCce
Q psy17489        113 ESEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VNLKRFC  175 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v  175 (177)
                      ++.      +++..++       .++|++|||||....       .++|+..+++|+.++.++++.+...   .+..+||
T Consensus        69 ~~~------~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv  142 (265)
T 3lf2_A           69 LDA------LQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIV  142 (265)
T ss_dssp             TCH------HHHHHHHHHHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEE
T ss_pred             CCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEE
Confidence            998      5655554       378999999997532       4678889999999999999988542   1344676


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       143 ~i  144 (265)
T 3lf2_A          143 CV  144 (265)
T ss_dssp             EE
T ss_pred             EE
Confidence            53

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.59  E-value=2.6e-14  Score=108.98  Aligned_cols=121  Identities=12%  Similarity=0.146  Sum_probs=88.9

Q ss_pred             cCCCceEEEecCCc-chHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         33 FYRDGQILVTGGTG-FMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        33 ~~~~~~vlVtG~~G-~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      .+++|+++||||+| +||.++++.|++.|   ++|++++|+...  . +...+.+..           ....++.++.+|
T Consensus        19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G---~~V~~~~r~~~~--~-~~~~~~l~~-----------~~~~~~~~~~~D   81 (266)
T 3o38_A           19 LLKGKVVLVTAAAGTGIGSTTARRALLEG---ADVVISDYHERR--L-GETRDQLAD-----------LGLGRVEAVVCD   81 (266)
T ss_dssp             TTTTCEEEESSCSSSSHHHHHHHHHHHTT---CEEEEEESCHHH--H-HHHHHHHHT-----------TCSSCEEEEECC
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHCC---CEEEEecCCHHH--H-HHHHHHHHh-----------cCCCceEEEEeC
Confidence            46799999999987 79999999999999   689999986521  1 111111110           012578999999


Q ss_pred             CCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc----CCCCC
Q psy17489        112 LESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC----VNLKR  173 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~  173 (177)
                      +++.      +++..+++       ++|++|||||...       ..+.++..+++|+.++.++++.+...    ++..+
T Consensus        82 l~~~------~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~  155 (266)
T 3o38_A           82 VTST------EAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGV  155 (266)
T ss_dssp             TTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEE
T ss_pred             CCCH------HHHHHHHHHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeE
Confidence            9998      66666554       6899999999753       24677889999999999999987653    13345


Q ss_pred             cee
Q psy17489        174 FCE  176 (177)
Q Consensus       174 ~v~  176 (177)
                      ||+
T Consensus       156 iv~  158 (266)
T 3o38_A          156 IVN  158 (266)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            665

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.58  E-value=1.4e-14  Score=109.33  Aligned_cols=115  Identities=9%  Similarity=0.121  Sum_probs=87.7

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|+.      +++.+.         .     ...++.++.+|++
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~------~~~~~~---------~-----~~~~~~~~~~D~~   60 (246)
T 2ag5_A            4 LDGKVIILTAAAQGIGQAAALAFAREG---AKVIATDINE------SKLQEL---------E-----KYPGIQTRVLDVT   60 (246)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESCH------HHHGGG---------G-----GSTTEEEEECCTT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCH------HHHHHH---------H-----hccCceEEEeeCC
Confidence            568999999999999999999999999   6899998864      222111         0     0136888999999


Q ss_pred             CCCCCCCHHHHHHHh---cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCceeC
Q psy17489        114 SEHLGLSEDSEQLIK---SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VNLKRFCEL  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~---~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~v  177 (177)
                      +.      +++..+.   .++|++|||||....       .+.|+..+++|+.++.++++.+...   .+..++|++
T Consensus        61 ~~------~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~i  131 (246)
T 2ag5_A           61 KK------KQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINM  131 (246)
T ss_dssp             CH------HHHHHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CH------HHHHHHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEE
Confidence            98      5666553   479999999997532       3678889999999999999987531   145677764

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.58  E-value=1.6e-14  Score=111.30  Aligned_cols=122  Identities=15%  Similarity=0.068  Sum_probs=85.0

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+|+||.++++.|++.|   ++|++.+|+...  . +.+.+.+...           ....+.++.+|+
T Consensus        30 ~l~gk~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~--~-~~~~~~~~~~-----------~~~~~~~~~~Dv   92 (281)
T 4dry_A           30 SGEGRIALVTGGGTGVGRGIAQALSAEG---YSVVITGRRPDV--L-DAAAGEIGGR-----------TGNIVRAVVCDV   92 (281)
T ss_dssp             ----CEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHH--H-HHHHHHHHHH-----------HSSCEEEEECCT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHH--H-HHHHHHHHhc-----------CCCeEEEEEcCC
Confidence            4678999999999999999999999999   689999987521  1 1111111100           112358899999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHhc----C-CCC
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKEC----V-NLK  172 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~~----~-~~~  172 (177)
                      ++.      +++..+++       ++|++|||||...        ..+.|+..+++|+.++.++.+.+...    + +..
T Consensus        93 ~d~------~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g  166 (281)
T 4dry_A           93 GDP------DQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGG  166 (281)
T ss_dssp             TCH------HHHHHHHHHHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCE
T ss_pred             CCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCc
Confidence            998      56665543       6899999999742        14678889999999999998876542    1 134


Q ss_pred             CceeC
Q psy17489        173 RFCEL  177 (177)
Q Consensus       173 ~~v~v  177 (177)
                      +||++
T Consensus       167 ~IV~i  171 (281)
T 4dry_A          167 RIINN  171 (281)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            67653

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.58  E-value=1.4e-14  Score=108.84  Aligned_cols=117  Identities=19%  Similarity=0.210  Sum_probs=82.8

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEE-EeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEE-EeCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM-VRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQV-IPSNLE  113 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~D~~  113 (177)
                      +|+++||||+|+||.++++.|++.|   ++|+++ +|+...  . +.+.+....            ...++.+ +.+|++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G---~~v~~~~~r~~~~--~-~~~~~~~~~------------~~~~~~~~~~~D~~   62 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDG---FALAIHYGQNREK--A-EEVAEEARR------------RGSPLVAVLGANLL   62 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTT---CEEEEEESSCHHH--H-HHHHHHHHH------------TTCSCEEEEECCTT
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEcCCCHHH--H-HHHHHHHHh------------cCCceEEEEeccCC
Confidence            4789999999999999999999999   588887 665311  1 111111110            1235666 899999


Q ss_pred             CCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHH----HhcCCCCCce
Q psy17489        114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLA----KECVNLKRFC  175 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v  175 (177)
                      +.      +++..++       .++|+|||+||...       ..+.++..+++|+.++.++++.+    ++. +.++||
T Consensus        63 ~~------~~~~~~~~~~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv  135 (245)
T 2ph3_A           63 EA------EAATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKA-RFGRIV  135 (245)
T ss_dssp             SH------HHHHHHHHHHHHHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEE
T ss_pred             CH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhc-CCCEEE
Confidence            97      5666554       47999999999753       24567888999999977766654    444 667888


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       136 ~~  137 (245)
T 2ph3_A          136 NI  137 (245)
T ss_dssp             EE
T ss_pred             EE
Confidence            74

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.58  E-value=9.5e-15  Score=111.25  Aligned_cols=100  Identities=17%  Similarity=0.150  Sum_probs=82.4

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+++||||+||||+++++.|++ |   ++|++++|++...                          .+   +.+|+.+. 
T Consensus         1 m~ilVtGatG~iG~~l~~~L~~-g---~~V~~~~r~~~~~--------------------------~~---~~~Dl~~~-   46 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLSE-R---HEVIKVYNSSEIQ--------------------------GG---YKLDLTDF-   46 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHTT-T---SCEEEEESSSCCT--------------------------TC---EECCTTSH-
T ss_pred             CEEEEECCCChhHHHHHHHHhc-C---CeEEEecCCCcCC--------------------------CC---ceeccCCH-
Confidence            4799999999999999999995 7   5899999876310                          12   78999987 


Q ss_pred             CCCCHHHHHHHhcC--CcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        117 LGLSEDSEQLIKSK--VNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       117 ~~~~~~~~~~~~~~--~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                           +.+..++++  +|+|||+||....   .++++..+++|+.++.+++++|.+. +. +|||+
T Consensus        47 -----~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~iv~~  105 (273)
T 2ggs_A           47 -----PRLEDFIIKKRPDVIINAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVI-DS-YIVHI  105 (273)
T ss_dssp             -----HHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TC-EEEEE
T ss_pred             -----HHHHHHHHhcCCCEEEECCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHh-CC-eEEEE
Confidence                 778888875  9999999998654   2456778999999999999999987 65 88874

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.58  E-value=1e-14  Score=109.86  Aligned_cols=111  Identities=12%  Similarity=0.087  Sum_probs=83.8

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      +.++|+++||||+|+||.++++.|++.|   ++|++++|+.....                         ....++.+|+
T Consensus         4 ~~~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~-------------------------~~~~~~~~D~   55 (241)
T 1dhr_A            4 SGEARRVLVYGGRGALGSRCVQAFRARN---WWVASIDVVENEEA-------------------------SASVIVKMTD   55 (241)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHTTT---CEEEEEESSCCTTS-------------------------SEEEECCCCS
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHhCC---CEEEEEeCChhhcc-------------------------CCcEEEEcCC
Confidence            4568999999999999999999999999   68999999764310                         2356778999


Q ss_pred             CCCCCCCCHHHHHHHhc---------CCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHhc-CCCCCc
Q psy17489        113 ESEHLGLSEDSEQLIKS---------KVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKEC-VNLKRF  174 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~---------~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~  174 (177)
                      ++.      +++..+++         ++|++|||||...        ..+.++..+++|+.++.++++.+.+. .+-.+|
T Consensus        56 ~~~------~~v~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~i  129 (241)
T 1dhr_A           56 SFT------EQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLL  129 (241)
T ss_dssp             CHH------HHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEE
T ss_pred             CCH------HHHHHHHHHHHHHhCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEE
Confidence            987      56655543         7999999999642        13567788999999999999998763 011366


Q ss_pred             eeC
Q psy17489        175 CEL  177 (177)
Q Consensus       175 v~v  177 (177)
                      |++
T Consensus       130 v~i  132 (241)
T 1dhr_A          130 TLA  132 (241)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            653

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.58  E-value=4.8e-14  Score=108.49  Aligned_cols=119  Identities=15%  Similarity=0.152  Sum_probs=89.3

Q ss_pred             cCCCceEEEecCCcc--hHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489         33 FYRDGQILVTGGTGF--MGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS  110 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~--iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  110 (177)
                      .+++|+++||||+|+  ||.++++.|++.|   ++|++++|+.    ..+.++++..             ...++.++.+
T Consensus        23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G---~~V~~~~r~~----~~~~~~~l~~-------------~~~~~~~~~~   82 (280)
T 3nrc_A           23 FLAGKKILITGLLSNKSIAYGIAKAMHREG---AELAFTYVGQ----FKDRVEKLCA-------------EFNPAAVLPC   82 (280)
T ss_dssp             TTTTCEEEECCCCSTTCHHHHHHHHHHHTT---CEEEEEECTT----CHHHHHHHHG-------------GGCCSEEEEC
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHcC---CEEEEeeCch----HHHHHHHHHH-------------hcCCceEEEe
Confidence            467899999999955  9999999999999   6899999976    2233333322             1246889999


Q ss_pred             CCCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC------------chHHHHHHHHHhHHHHHHHHHHHHhc--C
Q psy17489        111 NLESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR------------FDEALQKAIRANLYATKQMLNLAKEC--V  169 (177)
Q Consensus       111 D~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~------------~~~~~~~~~~~nv~~~~~ll~~~~~~--~  169 (177)
                      |+++.      +++..+++       ++|++|||||...            ..+.++..+++|+.++.++++++...  .
T Consensus        83 Dl~~~------~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~  156 (280)
T 3nrc_A           83 DVISD------QEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKN  156 (280)
T ss_dssp             CTTCH------HHHHHHHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred             ecCCH------HHHHHHHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            99998      56666543       6899999999753            23567778999999999999988653  1


Q ss_pred             CCCCceeC
Q psy17489        170 NLKRFCEL  177 (177)
Q Consensus       170 ~~~~~v~v  177 (177)
                      +..++|++
T Consensus       157 ~~g~iv~i  164 (280)
T 3nrc_A          157 RNASMVAL  164 (280)
T ss_dssp             TTCEEEEE
T ss_pred             CCCeEEEE
Confidence            23466653

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.58  E-value=2.3e-14  Score=110.81  Aligned_cols=109  Identities=16%  Similarity=0.170  Sum_probs=85.9

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +|+|+||||+|+||+++++.|++.|.  ++|++++|++...    ....+..               .++.++.+|+.+.
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~--~~V~~~~R~~~~~----~~~~l~~---------------~~~~~~~~D~~d~   63 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGT--FKVRVVTRNPRKK----AAKELRL---------------QGAEVVQGDQDDQ   63 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCS--SEEEEEESCTTSH----HHHHHHH---------------TTCEEEECCTTCH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCC--ceEEEEEcCCCCH----HHHHHHH---------------CCCEEEEecCCCH
Confidence            57999999999999999999999872  4899999976431    1111111               4688999999998


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                            +.+..+++++|+|||+++....   +  ..+.|+.++.+++++|++. ++++|||+
T Consensus        64 ------~~l~~~~~~~d~vi~~a~~~~~---~--~~~~~~~~~~~~~~aa~~~-gv~~iv~~  113 (299)
T 2wm3_A           64 ------VIMELALNGAYATFIVTNYWES---C--SQEQEVKQGKLLADLARRL-GLHYVVYS  113 (299)
T ss_dssp             ------HHHHHHHTTCSEEEECCCHHHH---T--CHHHHHHHHHHHHHHHHHH-TCSEEEEC
T ss_pred             ------HHHHHHHhcCCEEEEeCCCCcc---c--cchHHHHHHHHHHHHHHHc-CCCEEEEE
Confidence                  7899999999999999985211   1  2356788999999999998 89999984

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.58  E-value=2.4e-14  Score=108.65  Aligned_cols=115  Identities=19%  Similarity=0.293  Sum_probs=86.1

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +|+++||||+|+||.++++.|++.|.+ ..|+..+|+.      +.+.+....            ...++.++.+|+++.
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~-~~v~~~~r~~------~~~~~~~~~------------~~~~~~~~~~Dv~~~   62 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKD-TVVYGVARSE------APLKKLKEK------------YGDRFFYVVGDITED   62 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSS-CEEEEEESCH------HHHHHHHHH------------HGGGEEEEESCTTSH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCC-eEEEEecCCH------HHHHHHHHH------------hCCceEEEECCCCCH
Confidence            689999999999999999999998633 4788888764      222222211            124688999999998


Q ss_pred             CCCCCHHHHHHHhc-------CCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHH----HhcCCCCCcee
Q psy17489        116 HLGLSEDSEQLIKS-------KVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLA----KECVNLKRFCE  176 (177)
Q Consensus       116 ~~~~~~~~~~~~~~-------~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~  176 (177)
                            ++++.+++       ++|++|||||...        ..++|+..+++|+.++.++++.+    ++. + .++|+
T Consensus        63 ------~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~-g~iv~  134 (254)
T 3kzv_A           63 ------SVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKT-N-GNVVF  134 (254)
T ss_dssp             ------HHHHHHHHHHHHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-T-CEEEE
T ss_pred             ------HHHHHHHHHHHHhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-C-CeEEE
Confidence                  66666554       7899999999742        24678889999999999999988    333 3 56766


Q ss_pred             C
Q psy17489        177 L  177 (177)
Q Consensus       177 v  177 (177)
                      +
T Consensus       135 i  135 (254)
T 3kzv_A          135 V  135 (254)
T ss_dssp             E
T ss_pred             E
Confidence            3

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.58  E-value=2.8e-14  Score=117.86  Aligned_cols=124  Identities=23%  Similarity=0.378  Sum_probs=94.9

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      ...+++++||||+|+||.++++.|++.|.  .+|++++|+.......+.+.+.+..            ...++.++.+|+
T Consensus       223 ~~~~~~vLITGgtGgIG~~la~~La~~G~--~~vvl~~R~~~~~~~~~~l~~~l~~------------~g~~v~~~~~Dv  288 (486)
T 2fr1_A          223 WKPTGTVLVTGGTGGVGGQIARWLARRGA--PHLLLVSRSGPDADGAGELVAELEA------------LGARTTVAACDV  288 (486)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHHTC--SEEEEEESSGGGSTTHHHHHHHHHH------------TTCEEEEEECCT
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHcCC--CEEEEEcCCCCCcHHHHHHHHHHHh------------cCCEEEEEEeCC
Confidence            34678999999999999999999999984  4699999976422211222221111            235788999999


Q ss_pred             CCCCCCCCHHHHHHHhcC------CcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        113 ESEHLGLSEDSEQLIKSK------VNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~------~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      +|.      +.+..+++.      +|+|||+||....       .+.++..+++|+.++.++.+++.+. +.++||++
T Consensus       289 ~d~------~~v~~~~~~i~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~-~~~~~V~~  359 (486)
T 2fr1_A          289 TDR------ESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL-DLTAFVLF  359 (486)
T ss_dssp             TCH------HHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS-CCSEEEEE
T ss_pred             CCH------HHHHHHHHHHHhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC-CCCEEEEE
Confidence            998      788888765      4999999997532       3567778999999999999999887 78888874

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.58  E-value=2.7e-14  Score=109.65  Aligned_cols=117  Identities=14%  Similarity=0.130  Sum_probs=87.6

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +.+|+++||||+|+||.++++.|++.|   ++|++.+|+.      +.+.+....            ...++.++.+|++
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~------~~~~~~~~~------------~~~~~~~~~~Dv~   84 (272)
T 4dyv_A           26 TGKKIAIVTGAGSGVGRAVAVALAGAG---YGVALAGRRL------DALQETAAE------------IGDDALCVPTDVT   84 (272)
T ss_dssp             --CCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHHH------------HTSCCEEEECCTT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCH------HHHHHHHHH------------hCCCeEEEEecCC
Confidence            568999999999999999999999999   6899998864      223322221            1257889999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHhc---CC--CCC
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKEC---VN--LKR  173 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~--~~~  173 (177)
                      +.      +++..+++       ++|++|||||...        ..+.|+..+++|+.++.++++++...   .+  ..+
T Consensus        85 d~------~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~  158 (272)
T 4dyv_A           85 DP------DSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGR  158 (272)
T ss_dssp             SH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEE
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcE
Confidence            98      66666654       7999999999742        24678889999999999998877543   02  346


Q ss_pred             ceeC
Q psy17489        174 FCEL  177 (177)
Q Consensus       174 ~v~v  177 (177)
                      ||++
T Consensus       159 IV~i  162 (272)
T 4dyv_A          159 IINN  162 (272)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            7763

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.57  E-value=9.6e-15  Score=109.57  Aligned_cols=108  Identities=17%  Similarity=0.224  Sum_probs=83.3

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      ++|+++||||+|+||.++++.|++.|   ++|++++|++....                         ....++.+|+++
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G---~~V~~~~r~~~~~~-------------------------~~~~~~~~D~~~   53 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNG---YTVLNIDLSANDQA-------------------------DSNILVDGNKNW   53 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTT---EEEEEEESSCCTTS-------------------------SEEEECCTTSCH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEecCccccc-------------------------cccEEEeCCCCC
Confidence            57899999999999999999999999   68999999764310                         235677899998


Q ss_pred             CCCCCCHHHHHHHh---------cCCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHhc-CCCCCcee
Q psy17489        115 EHLGLSEDSEQLIK---------SKVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKEC-VNLKRFCE  176 (177)
Q Consensus       115 ~~~~~~~~~~~~~~---------~~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~  176 (177)
                      .      +++..++         .++|+||||||...        ..+.++..+++|+.++.++++.+... .+..+||+
T Consensus        54 ~------~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~  127 (236)
T 1ooe_A           54 T------EQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQL  127 (236)
T ss_dssp             H------HHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             H------HHHHHHHHHHHHHhCCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEE
Confidence            7      5565554         37999999999642        23567788999999999999998763 01136665

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.57  E-value=1.4e-14  Score=111.47  Aligned_cols=122  Identities=15%  Similarity=0.235  Sum_probs=87.6

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|+..      .+.+....     +.. ......++.++.+|++
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~------~~~~~~~~-----~~~-~~~~~~~~~~~~~Dv~   68 (280)
T 1xkq_A            4 FSNKTVIITGSSNGIGRTTAILFAQEG---ANVTITGRSSE------RLEETRQI-----ILK-SGVSEKQVNSVVADVT   68 (280)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESCHH------HHHHHHHH-----HHT-TTCCGGGEEEEECCTT
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHH------HHHHHHHH-----HHH-cCCCCcceEEEEecCC
Confidence            578999999999999999999999999   68999998642      22221110     000 0000116889999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-----------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCC
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-----------DEALQKAIRANLYATKQMLNLAKEC---VNLK  172 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-----------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~  172 (177)
                      +.      ++++.+++       ++|++|||||....           .+.|+..+++|+.++.++++.+...   .+ .
T Consensus        69 ~~------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g  141 (280)
T 1xkq_A           69 TE------DGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-G  141 (280)
T ss_dssp             SH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred             CH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-C
Confidence            98      56666544       79999999996421           3567889999999999999987653   13 6


Q ss_pred             CceeC
Q psy17489        173 RFCEL  177 (177)
Q Consensus       173 ~~v~v  177 (177)
                      +||++
T Consensus       142 ~iv~i  146 (280)
T 1xkq_A          142 EIVNV  146 (280)
T ss_dssp             EEEEE
T ss_pred             cEEEe
Confidence            77764

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.57  E-value=2.6e-14  Score=108.11  Aligned_cols=109  Identities=12%  Similarity=0.091  Sum_probs=85.2

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .++||+++||||+++||.++++.|.+.|   .+|++.+|+..     ++..+....            ...++..+.+|+
T Consensus         6 ~L~GKvalVTGas~GIG~aiA~~la~~G---a~Vvi~~r~~~-----~~~~~~~~~------------~g~~~~~~~~Dv   65 (247)
T 4hp8_A            6 SLEGRKALVTGANTGLGQAIAVGLAAAG---AEVVCAARRAP-----DETLDIIAK------------DGGNASALLIDF   65 (247)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSCC-----HHHHHHHHH------------TTCCEEEEECCT
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHcC---CEEEEEeCCcH-----HHHHHHHHH------------hCCcEEEEEccC
Confidence            4789999999999999999999999999   79999998753     122222111            346788999999


Q ss_pred             CCCCCCCCHHHHHHHh--cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        113 ESEHLGLSEDSEQLIK--SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~--~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      +++      +..+.++  .++|++|||||....       .++|+..+++|+.+++.+.+++.+
T Consensus        66 ~d~------~~v~~~~~~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~  123 (247)
T 4hp8_A           66 ADP------LAAKDSFTDAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAK  123 (247)
T ss_dssp             TST------TTTTTSSTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCH------HHHHHHHHhCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            998      3444444  379999999997542       578999999999999999887543

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.57  E-value=1.6e-14  Score=111.09  Aligned_cols=109  Identities=17%  Similarity=0.201  Sum_probs=83.5

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      ..+++|+++||||+|+||.++++.|++.|   ++|++++|+.      +.+.+....            ...++.++.+|
T Consensus        26 ~~l~~k~vlVTGas~GIG~aia~~l~~~G---~~Vi~~~r~~------~~~~~~~~~------------~~~~~~~~~~D   84 (281)
T 3ppi_A           26 KQFEGASAIVSGGAGGLGEATVRRLHADG---LGVVIADLAA------EKGKALADE------------LGNRAEFVSTN   84 (281)
T ss_dssp             GGGTTEEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHHH------------HCTTEEEEECC
T ss_pred             hccCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCh------HHHHHHHHH------------hCCceEEEEcC
Confidence            34689999999999999999999999999   6899999864      222222221            12578999999


Q ss_pred             CCCCCCCCCHHHHHHHhc------CCcEEEEc-CcccC------------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        112 LESEHLGLSEDSEQLIKS------KVNIIFHC-AASLR------------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~------~~d~vi~~-aa~~~------------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      +++.      +++..+++      ++|++||| |+...            ..+.++..+++|+.++.++++.+..
T Consensus        85 l~~~------~~v~~~~~~~~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  153 (281)
T 3ppi_A           85 VTSE------DSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAA  153 (281)
T ss_dssp             TTCH------HHHHHHHHHHTTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCCH------HHHHHHHHHHHHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            9998      66766654      68999999 44321            1345788999999999999998763

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.57  E-value=3.5e-15  Score=115.14  Aligned_cols=97  Identities=19%  Similarity=0.169  Sum_probs=81.2

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+|+||||+||||+++++.|+ .|   ++|++++|+..                                ++.+|+.+. 
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g---~~V~~~~r~~~--------------------------------~~~~D~~d~-   43 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PV---GNLIALDVHSK--------------------------------EFCGDFSNP-   43 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TT---SEEEEECTTCS--------------------------------SSCCCTTCH-
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cC---CeEEEeccccc--------------------------------cccccCCCH-
Confidence            479999999999999999999 78   68999988541                                246798887 


Q ss_pred             CCCCHHHHHHHhcC--CcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        117 LGLSEDSEQLIKSK--VNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       117 ~~~~~~~~~~~~~~--~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                           +.+..++++  +|+|||+||....   ..+++.++++|+.++.+++++|++. ++ ||||+
T Consensus        44 -----~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~  102 (299)
T 1n2s_A           44 -----KGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANET-GA-WVVHY  102 (299)
T ss_dssp             -----HHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTT-TC-EEEEE
T ss_pred             -----HHHHHHHHhcCCCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-cEEEE
Confidence                 778888875  9999999997653   2456778999999999999999988 66 78874

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.57  E-value=1.9e-14  Score=106.72  Aligned_cols=101  Identities=16%  Similarity=0.207  Sum_probs=80.7

Q ss_pred             CceEEEecCCcchHHHHHHHHH-hhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLL-RSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~-~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      +|+++||||+|+||+++++.|+ +.|   ++|++++|++..     ++.++..             ...++.++.+|+++
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g---~~V~~~~r~~~~-----~~~~~~~-------------~~~~~~~~~~D~~d   63 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTD---MHITLYGRQLKT-----RIPPEII-------------DHERVTVIEGSFQN   63 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCC---CEEEEEESSHHH-----HSCHHHH-------------TSTTEEEEECCTTC
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCC---ceEEEEecCccc-----cchhhcc-------------CCCceEEEECCCCC
Confidence            3579999999999999999999 888   589999997520     1111100             12578999999999


Q ss_pred             CCCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        115 EHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      .      +.+..+++++|+|||+||..            |+. +.++++.+++. +++|||++
T Consensus        64 ~------~~~~~~~~~~d~vv~~ag~~------------n~~-~~~~~~~~~~~-~~~~iv~i  106 (221)
T 3r6d_A           64 P------GXLEQAVTNAEVVFVGAMES------------GSD-MASIVKALSRX-NIRRVIGV  106 (221)
T ss_dssp             H------HHHHHHHTTCSEEEESCCCC------------HHH-HHHHHHHHHHT-TCCEEEEE
T ss_pred             H------HHHHHHHcCCCEEEEcCCCC------------Chh-HHHHHHHHHhc-CCCeEEEE
Confidence            8      78999999999999999964            334 88899999988 88899974

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.57  E-value=1.7e-14  Score=111.18  Aligned_cols=116  Identities=13%  Similarity=0.226  Sum_probs=86.9

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|+.      +.+.+....            ...++.++.+|++
T Consensus         3 l~gk~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~------~~~~~~~~~------------~~~~~~~~~~Dv~   61 (281)
T 3zv4_A            3 LTGEVALITGGASGLGRALVDRFVAEG---ARVAVLDKSA------ERLRELEVA------------HGGNAVGVVGDVR   61 (281)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHHH------------TBTTEEEEECCTT
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCc---CEEEEEeCCH------HHHHHHHHH------------cCCcEEEEEcCCC
Confidence            578999999999999999999999999   6899998864      233332221            1257889999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc------------hHHHHHHHHHhHHHHHHHHHHHHhc--CCCC
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF------------DEALQKAIRANLYATKQMLNLAKEC--VNLK  172 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~------------~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~  172 (177)
                      +.      +++..+++       ++|++|||||....            .+.|+..+++|+.++.++++++...  .+..
T Consensus        62 ~~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g  135 (281)
T 3zv4_A           62 SL------QDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRG  135 (281)
T ss_dssp             CH------HHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred             CH------HHHHHHHHHHHHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC
Confidence            97      55555543       78999999997421            2357888999999999999987543  0114


Q ss_pred             Ccee
Q psy17489        173 RFCE  176 (177)
Q Consensus       173 ~~v~  176 (177)
                      ++|+
T Consensus       136 ~iv~  139 (281)
T 3zv4_A          136 SVVF  139 (281)
T ss_dssp             EEEE
T ss_pred             eEEE
Confidence            6665

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.57  E-value=1.5e-14  Score=111.02  Aligned_cols=119  Identities=14%  Similarity=0.162  Sum_probs=89.1

Q ss_pred             CCCceEEEecCC--cchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         34 YRDGQILVTGGT--GFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        34 ~~~~~vlVtG~~--G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      +++|+++||||+  |+||.++++.|++.|   ++|++++|+..   ..+.+.++...             ..++.++.+|
T Consensus         4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G---~~V~~~~r~~~---~~~~~~~l~~~-------------~~~~~~~~~D   64 (275)
T 2pd4_A            4 LKGKKGLIVGVANNKSIAYGIAQSCFNQG---ATLAFTYLNES---LEKRVRPIAQE-------------LNSPYVYELD   64 (275)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTT---CEEEEEESSTT---THHHHHHHHHH-------------TTCCCEEECC
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCC---CEEEEEeCCHH---HHHHHHHHHHh-------------cCCcEEEEcC
Confidence            568999999999  999999999999999   68999999763   22333332211             1246789999


Q ss_pred             CCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-----------hHHHHHHHHHhHHHHHHHHHHHHhcC-CCC
Q psy17489        112 LESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-----------DEALQKAIRANLYATKQMLNLAKECV-NLK  172 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-----------~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~  172 (177)
                      +++.      +++..+++       ++|++|||||....           .+.++..+++|+.++.++++.+...- +-.
T Consensus        65 ~~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g  138 (275)
T 2pd4_A           65 VSKE------EHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGA  138 (275)
T ss_dssp             TTCH------HHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEE
T ss_pred             CCCH------HHHHHHHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCC
Confidence            9998      56666554       68999999997531           35678899999999999999987640 114


Q ss_pred             CceeC
Q psy17489        173 RFCEL  177 (177)
Q Consensus       173 ~~v~v  177 (177)
                      +||++
T Consensus       139 ~iv~i  143 (275)
T 2pd4_A          139 SVLTL  143 (275)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            66653

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.57  E-value=3.3e-15  Score=114.74  Aligned_cols=94  Identities=20%  Similarity=0.306  Sum_probs=80.0

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+|+||||+||||+++++.|++.|   ++|++++|.                                    ++|+.+. 
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r~------------------------------------~~D~~d~-   45 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEE---YDIYPFDKK------------------------------------LLDITNI-   45 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTT---EEEEEECTT------------------------------------TSCTTCH-
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCC---CEEEEeccc------------------------------------ccCCCCH-
Confidence            389999999999999999999998   689998872                                    2577777 


Q ss_pred             CCCCHHHHHHHhc--CCcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        117 LGLSEDSEQLIKS--KVNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       117 ~~~~~~~~~~~~~--~~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                           +.+..+++  ++|+|||+||.....   .++...+++|+.++.+++++|++. ++ ||||+
T Consensus        46 -----~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~v~~  104 (287)
T 3sc6_A           46 -----SQVQQVVQEIRPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLV-GA-KLVYI  104 (287)
T ss_dssp             -----HHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHH-TC-EEEEE
T ss_pred             -----HHHHHHHHhcCCCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEE
Confidence                 77888887  699999999987643   356778999999999999999998 66 68874

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.57  E-value=1.8e-14  Score=109.20  Aligned_cols=115  Identities=15%  Similarity=0.153  Sum_probs=86.3

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|+.      +.+.+....            ...++.++.+|++
T Consensus         4 l~~k~vlVTGas~giG~~ia~~l~~~G---~~V~~~~r~~------~~~~~~~~~------------~~~~~~~~~~D~~   62 (253)
T 1hxh_A            4 LQGKVALVTGGASGVGLEVVKLLLGEG---AKVAFSDINE------AAGQQLAAE------------LGERSMFVRHDVS   62 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEECSCH------HHHHHHHHH------------HCTTEEEECCCTT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCH------HHHHHHHHH------------cCCceEEEEccCC
Confidence            578999999999999999999999999   6899988864      222222111            0246889999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCce
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAK----ECVNLKRFC  175 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v  175 (177)
                      +.      +++..+++       ++|++|||||....       .++|+..+++|+.++.++.+.+.    +. + .+||
T Consensus        63 ~~------~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~-g~iv  134 (253)
T 1hxh_A           63 SE------ADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET-G-GSII  134 (253)
T ss_dssp             CH------HHHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-C-EEEE
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHc-C-CEEE
Confidence            97      56655543       57999999997532       36788899999999888877654    33 4 6777


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       135 ~i  136 (253)
T 1hxh_A          135 NM  136 (253)
T ss_dssp             EE
T ss_pred             EE
Confidence            64

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.57  E-value=1.4e-14  Score=109.30  Aligned_cols=108  Identities=18%  Similarity=0.186  Sum_probs=85.7

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHh-hCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLR-SFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~-~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .++|+++||||+|+||.++++.|++ .|   ..|++.+|++...                         ..++.++.+|+
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g---~~v~~~~~~~~~~-------------------------~~~~~~~~~Dv   53 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKN---HTVINIDIQQSFS-------------------------AENLKFIKADL   53 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTT---EEEEEEESSCCCC-------------------------CTTEEEEECCT
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCC---cEEEEeccccccc-------------------------cccceEEecCc
Confidence            3578999999999999999999998 66   6888888865421                         24678999999


Q ss_pred             CCCCCCCCHHHHHHHhc-----CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhcCCC--CCcee
Q psy17489        113 ESEHLGLSEDSEQLIKS-----KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKECVNL--KRFCE  176 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-----~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~~~~--~~~v~  176 (177)
                      ++.      +++..+++     ++|++|||||...       ..+.|+..+++|+.++.++++.+... -.  .++|+
T Consensus        54 ~~~------~~v~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~-~~~~g~iv~  124 (244)
T 4e4y_A           54 TKQ------QDITNVLDIIKNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENN-LKVGASIVF  124 (244)
T ss_dssp             TCH------HHHHHHHHHTTTCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGG-EEEEEEEEE
T ss_pred             CCH------HHHHHHHHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHH-hccCcEEEE
Confidence            998      67777665     7899999999753       24678889999999999999998764 11  35665

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.57  E-value=2.4e-14  Score=110.51  Aligned_cols=116  Identities=15%  Similarity=0.165  Sum_probs=82.1

Q ss_pred             cccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489         31 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS  110 (177)
Q Consensus        31 ~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  110 (177)
                      ...+++|+++||||+|+||.++++.|++.|   ++|++++|+.. ... +.+.+.+..           ....++.++.+
T Consensus        18 ~~~l~~k~~lVTGas~gIG~aia~~L~~~G---~~V~~~~r~~~-~~~-~~~~~~l~~-----------~~~~~~~~~~~   81 (288)
T 2x9g_A           18 GSHMEAPAAVVTGAAKRIGRAIAVKLHQTG---YRVVIHYHNSA-EAA-VSLADELNK-----------ERSNTAVVCQA   81 (288)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHHT---CEEEEEESSCH-HHH-HHHHHHHHH-----------HSTTCEEEEEC
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCC---CeEEEEeCCch-HHH-HHHHHHHHh-----------hcCCceEEEEe
Confidence            344678999999999999999999999999   68999998751 111 112111110           01257889999


Q ss_pred             CCCC----CCCCCCHHHHHHHhc-------CCcEEEEcCcccC-----------------chHHHHHHHHHhHHHHHHHH
Q psy17489        111 NLES----EHLGLSEDSEQLIKS-------KVNIIFHCAASLR-----------------FDEALQKAIRANLYATKQML  162 (177)
Q Consensus       111 D~~~----~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-----------------~~~~~~~~~~~nv~~~~~ll  162 (177)
                      |+++    .      +++..+++       ++|++|||||...                 ..+.++..+++|+.++.+++
T Consensus        82 Dv~~~~~~~------~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~  155 (288)
T 2x9g_A           82 DLTNSNVLP------ASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLT  155 (288)
T ss_dssp             CCSCSTTHH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHH
T ss_pred             ecCCccCCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHH
Confidence            9999    5      55555443       7999999999642                 12456678999999999999


Q ss_pred             HHHHhc
Q psy17489        163 NLAKEC  168 (177)
Q Consensus       163 ~~~~~~  168 (177)
                      +.+...
T Consensus       156 ~~~~~~  161 (288)
T 2x9g_A          156 MSFAQR  161 (288)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            987653

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.57  E-value=2.3e-14  Score=111.30  Aligned_cols=119  Identities=17%  Similarity=0.245  Sum_probs=88.0

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCC---CeEEEeC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRS---KIQVIPS  110 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~  110 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|+..      .+......     +    .....   ++.++.+
T Consensus        24 l~~k~vlVTGas~gIG~aia~~L~~~G---~~V~~~~r~~~------~~~~~~~~-----l----~~~~~~~~~~~~~~~   85 (297)
T 1xhl_A           24 FSGKSVIITGSSNGIGRSAAVIFAKEG---AQVTITGRNED------RLEETKQQ-----I----LKAGVPAEKINAVVA   85 (297)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESCHH------HHHHHHHH-----H----HHTTCCGGGEEEEEC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHH------HHHHHHHH-----H----HhcCCCCceEEEEec
Confidence            578999999999999999999999999   68999998642      22221110     0    00112   6889999


Q ss_pred             CCCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC---------chHHHHHHHHHhHHHHHHHHHHHHhc---CCC
Q psy17489        111 NLESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR---------FDEALQKAIRANLYATKQMLNLAKEC---VNL  171 (177)
Q Consensus       111 D~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~---------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~  171 (177)
                      |+++.      +++..+++       ++|++|||||...         ..+.|+..+++|+.++.++++++...   .+ 
T Consensus        86 Dv~d~------~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-  158 (297)
T 1xhl_A           86 DVTEA------SGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-  158 (297)
T ss_dssp             CTTSH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-
T ss_pred             CCCCH------HHHHHHHHHHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-
Confidence            99998      66666554       7999999999642         13567889999999999999887653   13 


Q ss_pred             CCceeC
Q psy17489        172 KRFCEL  177 (177)
Q Consensus       172 ~~~v~v  177 (177)
                      .+||++
T Consensus       159 g~IV~i  164 (297)
T 1xhl_A          159 GEIVNV  164 (297)
T ss_dssp             CEEEEE
T ss_pred             CEEEEE
Confidence            677764

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.57  E-value=1e-14  Score=111.18  Aligned_cols=121  Identities=12%  Similarity=0.091  Sum_probs=90.8

Q ss_pred             cccCCCceEEEecCC--cchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEE
Q psy17489         31 DDFYRDGQILVTGGT--GFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVI  108 (177)
Q Consensus        31 ~~~~~~~~vlVtG~~--G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  108 (177)
                      ....++|+++||||+  |+||.++++.|++.|   ++|++++|+..   ..+.+.+...             ...++.++
T Consensus         9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G---~~V~~~~r~~~---~~~~~~~~~~-------------~~~~~~~~   69 (271)
T 3ek2_A            9 MGFLDGKRILLTGLLSNRSIAYGIAKACKREG---AELAFTYVGDR---FKDRITEFAA-------------EFGSELVF   69 (271)
T ss_dssp             CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTT---CEEEEEESSGG---GHHHHHHHHH-------------HTTCCCEE
T ss_pred             ccccCCCEEEEeCCCCCCcHHHHHHHHHHHcC---CCEEEEecchh---hHHHHHHHHH-------------HcCCcEEE
Confidence            345689999999999  999999999999999   68999998742   2233333322             12457889


Q ss_pred             eCCCCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC------------chHHHHHHHHHhHHHHHHHHHHHHhc-
Q psy17489        109 PSNLESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR------------FDEALQKAIRANLYATKQMLNLAKEC-  168 (177)
Q Consensus       109 ~~D~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~------------~~~~~~~~~~~nv~~~~~ll~~~~~~-  168 (177)
                      .+|+++.      +++..+++       ++|++|||||...            ..+.++..+++|+.++.++++.+... 
T Consensus        70 ~~Dv~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~  143 (271)
T 3ek2_A           70 PCDVADD------AQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPML  143 (271)
T ss_dssp             ECCTTCH------HHHHHHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGE
T ss_pred             ECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHh
Confidence            9999998      66666654       6899999999753            23567788999999999999998764 


Q ss_pred             CCCCCcee
Q psy17489        169 VNLKRFCE  176 (177)
Q Consensus       169 ~~~~~~v~  176 (177)
                      .+..++|+
T Consensus       144 ~~~g~iv~  151 (271)
T 3ek2_A          144 SDDASLLT  151 (271)
T ss_dssp             EEEEEEEE
T ss_pred             ccCceEEE
Confidence            11235554

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.56  E-value=4.2e-14  Score=108.54  Aligned_cols=115  Identities=10%  Similarity=0.117  Sum_probs=86.0

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+++||||+|+||.++++.|++.|   ++|++++|+.      +.+.+....     +    ... .++.++.+|+++. 
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G---~~V~~~~r~~------~~~~~~~~~-----~----~~~-~~~~~~~~Dv~d~-   81 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAG---WSLVLTGRRE------ERLQALAGE-----L----SAK-TRVLPLTLDVRDR-   81 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHHH-----H----TTT-SCEEEEECCTTCH-
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCH------HHHHHHHHH-----h----hcC-CcEEEEEcCCCCH-
Confidence            899999999999999999999999   6899999864      222222111     0    001 3688999999998 


Q ss_pred             CCCCHHHHHHHhc-------CCcEEEEcCcccCc--------hHHHHHHHHHhHHHHHHHHHHHH----hcCCCC-Ccee
Q psy17489        117 LGLSEDSEQLIKS-------KVNIIFHCAASLRF--------DEALQKAIRANLYATKQMLNLAK----ECVNLK-RFCE  176 (177)
Q Consensus       117 ~~~~~~~~~~~~~-------~~d~vi~~aa~~~~--------~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~-~~v~  176 (177)
                           +++..+++       ++|++|||||....        .+.|+..+++|+.++.++++.+.    +. +.. +||+
T Consensus        82 -----~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-~~g~~IV~  155 (272)
T 2nwq_A           82 -----AAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAH-GAGASIVN  155 (272)
T ss_dssp             -----HHHHHHHHTCCGGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-CTTCEEEE
T ss_pred             -----HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCcEEEE
Confidence                 77777765       46999999997431        46788899999999998887764    33 445 7776


Q ss_pred             C
Q psy17489        177 L  177 (177)
Q Consensus       177 v  177 (177)
                      +
T Consensus       156 i  156 (272)
T 2nwq_A          156 L  156 (272)
T ss_dssp             E
T ss_pred             e
Confidence            4

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.56  E-value=1.9e-14  Score=109.68  Aligned_cols=122  Identities=16%  Similarity=0.151  Sum_probs=90.7

Q ss_pred             cCCCceEEEecCC--cchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489         33 FYRDGQILVTGGT--GFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS  110 (177)
Q Consensus        33 ~~~~~~vlVtG~~--G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  110 (177)
                      .+++|+++||||+  |+||.++++.|++.|   ++|++++|+.... .++.+.++...            ...++.++.+
T Consensus        17 ~l~~k~vlITGas~~~giG~~~a~~l~~~G---~~v~~~~~~~~~~-~~~~~~~l~~~------------~~~~~~~~~~   80 (267)
T 3gdg_A           17 SLKGKVVVVTGASGPKGMGIEAARGCAEMG---AAVAITYASRAQG-AEENVKELEKT------------YGIKAKAYKC   80 (267)
T ss_dssp             CCTTCEEEETTCCSSSSHHHHHHHHHHHTS---CEEEECBSSSSSH-HHHHHHHHHHH------------HCCCEECCBC
T ss_pred             CcCCCEEEEECCCCCCChHHHHHHHHHHCC---CeEEEEeCCcchh-HHHHHHHHHHh------------cCCceeEEec
Confidence            3678999999999  899999999999999   6888888875321 12333322211            1357889999


Q ss_pred             CCCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHH----hcCCCC
Q psy17489        111 NLESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAK----ECVNLK  172 (177)
Q Consensus       111 D~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~  172 (177)
                      |+++.      ++++.+++       ++|++|||||...       ..+.++..+++|+.++.++++.+.    +. +..
T Consensus        81 Dl~~~------~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g  153 (267)
T 3gdg_A           81 QVDSY------ESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKER-GTG  153 (267)
T ss_dssp             CTTCH------HHHHHHHHHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCC
T ss_pred             CCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHc-CCc
Confidence            99998      56665543       6899999999753       246788899999999999999873    33 445


Q ss_pred             CceeC
Q psy17489        173 RFCEL  177 (177)
Q Consensus       173 ~~v~v  177 (177)
                      ++|++
T Consensus       154 ~iv~i  158 (267)
T 3gdg_A          154 SLVIT  158 (267)
T ss_dssp             EEEEE
T ss_pred             eEEEE
Confidence            77653

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.56  E-value=2.5e-14  Score=108.40  Aligned_cols=111  Identities=12%  Similarity=0.142  Sum_probs=81.6

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|+  ..|++++|+...    +.+.++...         .  ...++.++.+|++
T Consensus         3 l~~k~vlVtGas~gIG~~~a~~l~~~G~--~~v~~~~r~~~~----~~~~~l~~~---------~--~~~~~~~~~~D~~   65 (254)
T 1sby_A            3 LTNKNVIFVAALGGIGLDTSRELVKRNL--KNFVILDRVENP----TALAELKAI---------N--PKVNITFHTYDVT   65 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTCC--SEEEEEESSCCH----HHHHHHHHH---------C--TTSEEEEEECCTT
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCC--cEEEEEecCchH----HHHHHHHHh---------C--CCceEEEEEEecC
Confidence            5689999999999999999999999993  248888887531    222222110         0  1246888999999


Q ss_pred             CCCCCCCHHHHHHH-------hcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        114 SEHLGLSEDSEQLI-------KSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       114 ~~~~~~~~~~~~~~-------~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      +..     +++..+       +.++|++|||||... .+.++..+++|+.++.++++++..
T Consensus        66 ~~~-----~~~~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~N~~g~~~l~~~~~~  120 (254)
T 1sby_A           66 VPV-----AESKKLLKKIFDQLKTVDILINGAGILD-DHQIERTIAINFTGLVNTTTAILD  120 (254)
T ss_dssp             SCH-----HHHHHHHHHHHHHHSCCCEEEECCCCCC-TTCHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCh-----HHHHHHHHHHHHhcCCCCEEEECCccCC-HHHHhhhheeeehhHHHHHHHHHH
Confidence            861     233333       347999999999753 456788999999999999998865

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.56  E-value=4.4e-14  Score=117.29  Aligned_cols=124  Identities=18%  Similarity=0.300  Sum_probs=94.1

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCC-ChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGS-SPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      ...+++++||||+|+||.++++.|.+.|+  .+|++++|+.... ...+...++..             ...++.++.+|
T Consensus       256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~--~~vvl~~R~~~~~~~~~~l~~~l~~-------------~g~~v~~~~~D  320 (511)
T 2z5l_A          256 WQPSGTVLITGGMGAIGRRLARRLAAEGA--ERLVLTSRRGPEAPGAAELAEELRG-------------HGCEVVHAACD  320 (511)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTC--SEEEEEESSGGGSTTHHHHHHHHHT-------------TTCEEEEEECC
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHhCCC--cEEEEEecCCcccHHHHHHHHHHHh-------------cCCEEEEEEeC
Confidence            34678999999999999999999999984  4788889875322 22222222211             23568899999


Q ss_pred             CCCCCCCCCHHHHHHHhcC--CcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        112 LESEHLGLSEDSEQLIKSK--VNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~--~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      ++|.      +.+..+++.  +|+|||+||....       .+.++..+++|+.++.++.+++....+.++||++
T Consensus       321 vtd~------~~v~~~~~~~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~  389 (511)
T 2z5l_A          321 VAER------DALAALVTAYPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLF  389 (511)
T ss_dssp             SSCH------HHHHHHHHHSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEE
T ss_pred             CCCH------HHHHHHHhcCCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEE
Confidence            9998      788888864  9999999997542       3567778999999999999988764356788874

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.56  E-value=1e-14  Score=121.20  Aligned_cols=102  Identities=16%  Similarity=0.183  Sum_probs=79.3

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +|+|+||||+||||+++++.|++.|   ++|++++|+....                             ..+.+|+.+.
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G---~~V~~l~R~~~~~-----------------------------~~v~~d~~~~  194 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGG---HEVIQLVRKEPKP-----------------------------GKRFWDPLNP  194 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESSSCCT-----------------------------TCEECCTTSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCCCCc-----------------------------cceeecccch
Confidence            7899999999999999999999999   5999999976421                             1256676643


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCcccCc----hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAASLRF----DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~~----~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                              +..+++++|+|||+||....    ......++++|+.++.++++++.+..++++|||+
T Consensus       195 --------~~~~l~~~D~Vih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~  252 (516)
T 3oh8_A          195 --------ASDLLDGADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISA  252 (516)
T ss_dssp             --------CTTTTTTCSEEEECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEE
T ss_pred             --------hHHhcCCCCEEEECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEe
Confidence                    23456789999999997532    3456678999999999999994443388999984

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.55  E-value=1.4e-14  Score=112.23  Aligned_cols=104  Identities=20%  Similarity=0.395  Sum_probs=80.7

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC-CCCCh---HHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK-KGSSP---EERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      +++|+||||+|+||+++++.|++.|   ++|++++|+. .....   .+.+..+.               ..++.++.+|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~~~~~~~~~~~~l~---------------~~~v~~v~~D   63 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAG---NPTYALVRKTITAANPETKEELIDNYQ---------------SLGVILLEGD   63 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHT---CCEEEEECCSCCSSCHHHHHHHHHHHH---------------HTTCEEEECC
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCC---CcEEEEECCCcccCChHHHHHHHHHHH---------------hCCCEEEEeC
Confidence            5789999999999999999999999   5889999975 22111   11111111               1468899999


Q ss_pred             CCCCCCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCC-CCCcee
Q psy17489        112 LESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVN-LKRFCE  176 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~~~v~  176 (177)
                      +.+.      +.+..+++++|+|||+++...            +.++.+++++|++. + ++|||+
T Consensus        64 ~~d~------~~l~~~~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~-g~v~~~v~  110 (307)
T 2gas_A           64 INDH------ETLVKAIKQVDIVICAAGRLL------------IEDQVKIIKAIKEA-GNVKKFFP  110 (307)
T ss_dssp             TTCH------HHHHHHHTTCSEEEECSSSSC------------GGGHHHHHHHHHHH-CCCSEEEC
T ss_pred             CCCH------HHHHHHHhCCCEEEECCcccc------------cccHHHHHHHHHhc-CCceEEee
Confidence            9998      789999999999999999754            34567889999988 6 899874

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.55  E-value=1.6e-14  Score=110.62  Aligned_cols=100  Identities=20%  Similarity=0.273  Sum_probs=78.1

Q ss_pred             eEEEecCCcchHHHHHHHHHhh--CCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         38 QILVTGGTGFMGKLLIDKLLRS--FPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        38 ~vlVtG~~G~iG~~l~~~L~~~--g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +|+||||+||||+++++.|++.  |   ++|++++|++...   ..+..                  .++.++.+|+.+.
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g---~~V~~~~r~~~~~---~~~~~------------------~~~~~~~~D~~d~   56 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPA---SQIVAIVRNPAKA---QALAA------------------QGITVRQADYGDE   56 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCG---GGEEEEESCTTTC---HHHHH------------------TTCEEEECCTTCH
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCC---ceEEEEEcChHhh---hhhhc------------------CCCeEEEcCCCCH
Confidence            4899999999999999999998  7   6899999976432   11111                  3678899999998


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                            +.+..+++++|+|||+|+...         ..|+.++.+++++|++. ++++|||+
T Consensus        57 ------~~~~~~~~~~d~vi~~a~~~~---------~~~~~~~~~l~~a~~~~-~~~~~v~~  102 (286)
T 2zcu_A           57 ------AALTSALQGVEKLLLISSSEV---------GQRAPQHRNVINAAKAA-GVKFIAYT  102 (286)
T ss_dssp             ------HHHHHHTTTCSEEEECC-----------------CHHHHHHHHHHHH-TCCEEEEE
T ss_pred             ------HHHHHHHhCCCEEEEeCCCCc---------hHHHHHHHHHHHHHHHc-CCCEEEEE
Confidence                  789999999999999999521         25788999999999998 89999984

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.55  E-value=2.6e-14  Score=107.21  Aligned_cols=102  Identities=14%  Similarity=0.254  Sum_probs=80.9

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      .+|+++||||+|+||+++++.|++.|.  .+|++++|++....                     .....++.++.+|+++
T Consensus        22 ~mk~vlVtGatG~iG~~l~~~L~~~G~--~~V~~~~R~~~~~~---------------------~~~~~~~~~~~~Dl~d   78 (236)
T 3qvo_A           22 HMKNVLILGAGGQIARHVINQLADKQT--IKQTLFARQPAKIH---------------------KPYPTNSQIIMGDVLN   78 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTT--EEEEEEESSGGGSC---------------------SSCCTTEEEEECCTTC
T ss_pred             cccEEEEEeCCcHHHHHHHHHHHhCCC--ceEEEEEcChhhhc---------------------ccccCCcEEEEecCCC
Confidence            468999999999999999999999982  48999999753210                     0012478999999999


Q ss_pred             CCCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        115 EHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      .      +.+..+++++|+|||+++.....           ..+.++++++++. ++++|||+
T Consensus        79 ~------~~~~~~~~~~D~vv~~a~~~~~~-----------~~~~~~~~~~~~~-~~~~iV~i  123 (236)
T 3qvo_A           79 H------AALKQAMQGQDIVYANLTGEDLD-----------IQANSVIAAMKAC-DVKRLIFV  123 (236)
T ss_dssp             H------HHHHHHHTTCSEEEEECCSTTHH-----------HHHHHHHHHHHHT-TCCEEEEE
T ss_pred             H------HHHHHHhcCCCEEEEcCCCCchh-----------HHHHHHHHHHHHc-CCCEEEEE
Confidence            8      88999999999999999863221           2355789999988 88899985

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.55  E-value=5.6e-14  Score=108.73  Aligned_cols=117  Identities=14%  Similarity=0.108  Sum_probs=81.7

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEE-eCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV-RDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++ |+.      +.+......     +..   ....++.++.+|+
T Consensus         7 l~~k~~lVTGas~GIG~aia~~la~~G---~~V~~~~~r~~------~~~~~~~~~-----l~~---~~~~~~~~~~~Dl   69 (291)
T 1e7w_A            7 PTVPVALVTGAAKRLGRSIAEGLHAEG---YAVCLHYHRSA------AEANALSAT-----LNA---RRPNSAITVQADL   69 (291)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCH------HHHHHHHHH-----HHH---HSTTCEEEEECCC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCC---CeEEEEcCCCH------HHHHHHHHH-----Hhh---hcCCeeEEEEeec
Confidence            578999999999999999999999999   6899998 754      122211110     000   0125788999999


Q ss_pred             CCCC-CC----------CCHHHHHHHhc-------CCcEEEEcCcccCc---------------------hHHHHHHHHH
Q psy17489        113 ESEH-LG----------LSEDSEQLIKS-------KVNIIFHCAASLRF---------------------DEALQKAIRA  153 (177)
Q Consensus       113 ~~~~-~~----------~~~~~~~~~~~-------~~d~vi~~aa~~~~---------------------~~~~~~~~~~  153 (177)
                      ++.. ..          ...+++..+++       ++|++|||||....                     .+.|+..+++
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (291)
T 1e7w_A           70 SNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGS  149 (291)
T ss_dssp             SSSCBCCCC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHH
T ss_pred             CCcccccccccccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHH
Confidence            9972 00          00005555443       79999999997421                     4567788999


Q ss_pred             hHHHHHHHHHHHHh
Q psy17489        154 NLYATKQMLNLAKE  167 (177)
Q Consensus       154 nv~~~~~ll~~~~~  167 (177)
                      |+.++.++++.+..
T Consensus       150 N~~g~~~l~~~~~~  163 (291)
T 1e7w_A          150 NAIAPYFLIKAFAH  163 (291)
T ss_dssp             HTHHHHHHHHHHHH
T ss_pred             HhHHHHHHHHHHHH
Confidence            99999999998764

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.55  E-value=3.3e-14  Score=110.86  Aligned_cols=102  Identities=19%  Similarity=0.363  Sum_probs=81.0

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +++|+||||+|++|+++++.|++.|   ++|++++|+... .. ..+..+..               .++.++.+|+.+.
T Consensus        11 ~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~l~R~~~~-~~-~~~~~l~~---------------~~v~~v~~Dl~d~   70 (318)
T 2r6j_A           11 KSKILIFGGTGYIGNHMVKGSLKLG---HPTYVFTRPNSS-KT-TLLDEFQS---------------LGAIIVKGELDEH   70 (318)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTT---CCEEEEECTTCS-CH-HHHHHHHH---------------TTCEEEECCTTCH
T ss_pred             CCeEEEECCCchHHHHHHHHHHHCC---CcEEEEECCCCc-hh-hHHHHhhc---------------CCCEEEEecCCCH
Confidence            3589999999999999999999998   589999998642 11 22222111               4688999999998


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCC-CCCcee
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVN-LKRFCE  176 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~~~v~  176 (177)
                            +++..+++++|+|||+++...            +.++.+++++|++. + ++|||+
T Consensus        71 ------~~l~~a~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~-g~v~~~v~  113 (318)
T 2r6j_A           71 ------EKLVELMKKVDVVISALAFPQ------------ILDQFKILEAIKVA-GNIKRFLP  113 (318)
T ss_dssp             ------HHHHHHHTTCSEEEECCCGGG------------STTHHHHHHHHHHH-CCCCEEEC
T ss_pred             ------HHHHHHHcCCCEEEECCchhh------------hHHHHHHHHHHHhc-CCCCEEEe
Confidence                  789999999999999999642            44567899999988 6 899874

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.55  E-value=7.2e-14  Score=105.78  Aligned_cols=117  Identities=20%  Similarity=0.222  Sum_probs=81.3

Q ss_pred             ccccccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEE
Q psy17489         28 QKVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQV  107 (177)
Q Consensus        28 ~~~~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  107 (177)
                      .+....+++|+++||||+|+||.++++.|++.|   ++|++++|+.      +.+.+                 ..++.+
T Consensus        11 ~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G---~~V~~~~r~~------~~~~~-----------------~~~~~~   64 (249)
T 1o5i_A           11 HHMELGIRDKGVLVLAASRGIGRAVADVLSQEG---AEVTICARNE------ELLKR-----------------SGHRYV   64 (249)
T ss_dssp             -----CCTTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHH-----------------TCSEEE
T ss_pred             hhHHhccCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEcCCH------HHHHh-----------------hCCeEE
Confidence            344556789999999999999999999999999   6899999864      11111                 024666


Q ss_pred             EeCCCCCCCCCCCHHHHHHHhcCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHH----HhcCCCCCcee
Q psy17489        108 IPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLA----KECVNLKRFCE  176 (177)
Q Consensus       108 ~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~  176 (177)
                      + +|+ ...    .+.+...+.++|++|||||....       .+.++..+++|+.++.++.+.+    ++. +..+||+
T Consensus        65 ~-~D~-~~~----~~~~~~~~~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~  137 (249)
T 1o5i_A           65 V-CDL-RKD----LDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK-GWGRIVA  137 (249)
T ss_dssp             E-CCT-TTC----HHHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEE
T ss_pred             E-eeH-HHH----HHHHHHHhcCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEE
Confidence            7 999 221    13333333489999999996432       4667889999999988776654    344 5678876


Q ss_pred             C
Q psy17489        177 L  177 (177)
Q Consensus       177 v  177 (177)
                      +
T Consensus       138 i  138 (249)
T 1o5i_A          138 I  138 (249)
T ss_dssp             E
T ss_pred             E
Confidence            4

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.54  E-value=2.9e-14  Score=108.79  Aligned_cols=122  Identities=13%  Similarity=0.124  Sum_probs=85.7

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      ++++|+++||||+|+||.++++.|++.|   ++|++++|+..      ...+....     +....  ...++.++.+|+
T Consensus         4 m~~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~------~~~~~~~~-----l~~~~--~~~~~~~~~~D~   67 (267)
T 2gdz_A            4 MVNGKVALVTGAAQGIGRAFAEALLLKG---AKVALVDWNLE------AGVQCKAA-----LHEQF--EPQKTLFIQCDV   67 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHH------HHHHHHHH-----HTTTS--CGGGEEEEECCT
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCC---CEEEEEECCHH------HHHHHHHH-----HHhhc--CCCceEEEecCC
Confidence            4678999999999999999999999999   68999988642      11111110     00000  023688899999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHH----hcC--CCCCceeC
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAK----ECV--NLKRFCEL  177 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~--~~~~~v~v  177 (177)
                      ++.      +++..+++       ++|++|||||... .++|+..+++|+.++..+.+.+.    +.+  +..+||++
T Consensus        68 ~~~------~~v~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~i  138 (267)
T 2gdz_A           68 ADQ------QQLRDTFRKVVDHFGRLDILVNNAGVNN-EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINM  138 (267)
T ss_dssp             TSH------HHHHHHHHHHHHHHSCCCEEEECCCCCC-SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEE
T ss_pred             CCH------HHHHHHHHHHHHHcCCCCEEEECCCCCC-hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEe
Confidence            998      66666554       5899999999754 45678889999998777665543    321  14677764

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.54  E-value=2.8e-14  Score=110.50  Aligned_cols=107  Identities=21%  Similarity=0.374  Sum_probs=81.1

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +++|+||||+|++|+++++.|++.|   ++|++++|+.......++...+..      +      ...++.++.+|+.+.
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~l~R~~~~~~~~~~~~~~~~------l------~~~~v~~v~~D~~d~   68 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLG---HPTFLLVRESTASSNSEKAQLLES------F------KASGANIVHGSIDDH   68 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTT---CCEEEECCCCCTTTTHHHHHHHHH------H------HTTTCEEECCCTTCH
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCC---CCEEEEECCcccccCHHHHHHHHH------H------HhCCCEEEEeccCCH
Confidence            5789999999999999999999998   588999997643200111111100      0      014688999999998


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCC-CCCcee
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVN-LKRFCE  176 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~~~v~  176 (177)
                            +.+..+++++|+|||+++...            +.++.+++++|++. + ++|||+
T Consensus        69 ------~~l~~~~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~-g~v~~~v~  111 (308)
T 1qyc_A           69 ------ASLVEAVKNVDVVISTVGSLQ------------IESQVNIIKAIKEV-GTVKRFFP  111 (308)
T ss_dssp             ------HHHHHHHHTCSEEEECCCGGG------------SGGGHHHHHHHHHH-CCCSEEEC
T ss_pred             ------HHHHHHHcCCCEEEECCcchh------------hhhHHHHHHHHHhc-CCCceEee
Confidence                  789999999999999999643            34567899999988 6 899874

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.54  E-value=7.8e-14  Score=109.79  Aligned_cols=117  Identities=14%  Similarity=0.108  Sum_probs=81.6

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEE-eCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV-RDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++ |+.      +.+......     +..   ....++.++.+|+
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G---~~Vv~~~~r~~------~~~~~~~~~-----l~~---~~~~~~~~~~~Dl  106 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEG---YAVCLHYHRSA------AEANALSAT-----LNA---RRPNSAITVQADL  106 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCH------HHHHHHHHH-----HHH---HSTTCEEEEECCC
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEcCCCH------HHHHHHHHH-----HHh---hcCCeEEEEEeeC
Confidence            678999999999999999999999999   6899988 754      222221110     000   0124788999999


Q ss_pred             CCCC-CC----------CCHHHHHHHhc-------CCcEEEEcCcccCc---------------------hHHHHHHHHH
Q psy17489        113 ESEH-LG----------LSEDSEQLIKS-------KVNIIFHCAASLRF---------------------DEALQKAIRA  153 (177)
Q Consensus       113 ~~~~-~~----------~~~~~~~~~~~-------~~d~vi~~aa~~~~---------------------~~~~~~~~~~  153 (177)
                      ++.. ..          ....++..+++       ++|+||||||....                     .+.|+..+++
T Consensus       107 ~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~v  186 (328)
T 2qhx_A          107 SNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGS  186 (328)
T ss_dssp             SSSCBCC-------CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHH
T ss_pred             CCchhccccccccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHH
Confidence            9972 00          00005555443       79999999997421                     4567788999


Q ss_pred             hHHHHHHHHHHHHh
Q psy17489        154 NLYATKQMLNLAKE  167 (177)
Q Consensus       154 nv~~~~~ll~~~~~  167 (177)
                      |+.++.++++.+..
T Consensus       187 N~~g~~~l~~~~~~  200 (328)
T 2qhx_A          187 NAIAPYFLIKAFAH  200 (328)
T ss_dssp             HTHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999988753

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.54  E-value=5.9e-14  Score=110.43  Aligned_cols=123  Identities=12%  Similarity=0.101  Sum_probs=88.1

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCC-ChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGS-SPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      ++|+++||||+|+||.++++.|++.|   ++|+.++|+.... ...+.+.....          ......++.++.+|++
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G---~~v~~v~r~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~Dv~   67 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDP---SQSFKVYATLRDLKTQGRLWEAARA----------LACPPGSLETLQLDVR   67 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCT---TCCEEEEEEESCGGGTHHHHHHHHH----------TTCCTTSEEEEECCTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCC---CceEEEEeecCcHHHHHHHHHHhhh----------ccCCCCceEEEEecCC
Confidence            36899999999999999999999999   4666666654322 12222221100          0001257889999999


Q ss_pred             CCCCCCCHHHHHHHhc-----CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCceeC
Q psy17489        114 SEHLGLSEDSEQLIKS-----KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAK----ECVNLKRFCEL  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-----~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~v  177 (177)
                      +.      +++..+++     ++|++|||||...       ..+.++..+++|+.++.++++.+.    +. +..+||++
T Consensus        68 d~------~~v~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-~~g~IV~i  140 (327)
T 1jtv_A           68 DS------KSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRR-GSGRVLVT  140 (327)
T ss_dssp             CH------HHHHHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEE
T ss_pred             CH------HHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEE
Confidence            98      77888776     4899999999642       235678899999999999999863    33 56678764

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.53  E-value=9.9e-14  Score=105.97  Aligned_cols=101  Identities=16%  Similarity=0.226  Sum_probs=81.0

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .++||+++||||+++||.++++.|++.|   ++|++.+|+....                         ..+..++++|+
T Consensus         8 ~L~GK~alVTGas~GIG~aia~~la~~G---a~V~~~~r~~~~~-------------------------~~~~~~~~~Dv   59 (261)
T 4h15_A            8 NLRGKRALITAGTKGAGAATVSLFLELG---AQVLTTARARPEG-------------------------LPEELFVEADL   59 (261)
T ss_dssp             CCTTCEEEESCCSSHHHHHHHHHHHHTT---CEEEEEESSCCTT-------------------------SCTTTEEECCT
T ss_pred             CCCCCEEEEeccCcHHHHHHHHHHHHcC---CEEEEEECCchhC-------------------------CCcEEEEEcCC
Confidence            4789999999999999999999999999   6999999975321                         13345788999


Q ss_pred             CCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC---------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        113 ESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR---------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~---------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      ++.      ++++.++       .++|++|||||...         ..++|+..+++|+.++.++.+.+..
T Consensus        60 ~~~------~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p  124 (261)
T 4h15_A           60 TTK------EGCAIVAEATRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVP  124 (261)
T ss_dssp             TSH------HHHHHHHHHHHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCH------HHHHHHHHHHHHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhch
Confidence            998      5555543       37999999998632         1467889999999999999887654

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.53  E-value=9.9e-14  Score=114.68  Aligned_cols=122  Identities=19%  Similarity=0.331  Sum_probs=94.2

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      .+++++||||+|+||.++++.|.+.|.  .+|++.+|+.......+++.+.+..            ...++.++.+|++|
T Consensus       238 ~~~~vLITGgsgGIG~alA~~La~~Ga--~~vvl~~R~~~~~~~~~~l~~~l~~------------~g~~v~~~~~Dvtd  303 (496)
T 3mje_A          238 VHGSVLVTGGTGGIGGRVARRLAEQGA--AHLVLTSRRGADAPGAAELRAELEQ------------LGVRVTIAACDAAD  303 (496)
T ss_dssp             CCSEEEEETCSSHHHHHHHHHHHHTTC--SEEEEEESSGGGSTTHHHHHHHHHH------------TTCEEEEEECCTTC
T ss_pred             CCCEEEEECCCCchHHHHHHHHHHCCC--cEEEEEeCCCCChHHHHHHHHHHHh------------cCCeEEEEEccCCC
Confidence            358999999999999999999999984  4888888875332222222222211            23578999999999


Q ss_pred             CCCCCCHHHHHHHhc------CCcEEEEcCccc-C-------chHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        115 EHLGLSEDSEQLIKS------KVNIIFHCAASL-R-------FDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~------~~d~vi~~aa~~-~-------~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      .      +++..+++      ++|+||||||.. .       ..+.++..+++|+.++.++.+++.+. ...+||++
T Consensus       304 ~------~~v~~~~~~i~~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~-~~~~iV~~  373 (496)
T 3mje_A          304 R------EALAALLAELPEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL-DLDAFVLF  373 (496)
T ss_dssp             H------HHHHHHHHTCCTTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS-CCSEEEEE
T ss_pred             H------HHHHHHHHHHHHhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc-CCCEEEEE
Confidence            8      77888775      479999999976 2       13567889999999999999999987 77888864

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.53  E-value=1.1e-14  Score=106.75  Aligned_cols=109  Identities=16%  Similarity=0.247  Sum_probs=84.2

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+++||||+|+||+++++.|++.     +|++++|++      +........             ... .++.+|+++. 
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~-----~V~~~~r~~------~~~~~~~~~-------------~~~-~~~~~D~~~~-   54 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH-----DLLLSGRRA------GALAELARE-------------VGA-RALPADLADE-   54 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS-----EEEEECSCH------HHHHHHHHH-------------HTC-EECCCCTTSH-
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC-----CEEEEECCH------HHHHHHHHh-------------ccC-cEEEeeCCCH-
Confidence            57999999999999999999865     788888864      222222111             012 7888999998 


Q ss_pred             CCCCHHHHHHHhc---CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        117 LGLSEDSEQLIKS---KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       117 ~~~~~~~~~~~~~---~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                           +++..+++   ++|+|||+||....       .++++..+++|+.++.++++++++. +.++||++
T Consensus        55 -----~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~  119 (207)
T 2yut_A           55 -----LEAKALLEEAGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQ-KGARAVFF  119 (207)
T ss_dssp             -----HHHHHHHHHHCSEEEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEE-EEEEEEEE
T ss_pred             -----HHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhc-CCcEEEEE
Confidence                 77888877   89999999997532       3567788999999999999999665 66788874

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.53  E-value=1.3e-14  Score=112.23  Aligned_cols=108  Identities=24%  Similarity=0.298  Sum_probs=83.3

Q ss_pred             eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCC
Q psy17489         38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHL  117 (177)
Q Consensus        38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~  117 (177)
                      +|+||||+||||+++++.|++.|.  ..|++++|.+..... ..+                    .++. +.+|+.+.  
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~--~~V~~~~r~~~~~~~-~~~--------------------~~~~-~~~d~~~~--   54 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGI--TDILVVDNLKDGTKF-VNL--------------------VDLN-IADYMDKE--   54 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTC--CCEEEEECCSSGGGG-HHH--------------------HTSC-CSEEEEHH--
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCC--cEEEEEccCCCCchh-hhc--------------------Ccce-eccccccH--
Confidence            489999999999999999999983  478888886532111 100                    1122 66788876  


Q ss_pred             CCCHHHHHHHhcC-----CcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        118 GLSEDSEQLIKSK-----VNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       118 ~~~~~~~~~~~~~-----~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                          +.+..++++     +|+|||+|+.... ..+++.++++|+.++.+++++|++. ++ ||||+
T Consensus        55 ----~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~  114 (310)
T 1eq2_A           55 ----DFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYA  114 (310)
T ss_dssp             ----HHHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TC-CEEEE
T ss_pred             ----HHHHHHHhccccCCCcEEEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEE
Confidence                677887764     9999999997653 3456778999999999999999998 77 99874

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.53  E-value=1.1e-13  Score=104.11  Aligned_cols=115  Identities=17%  Similarity=0.191  Sum_probs=83.2

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +|+++||||+|+||.++++.|++.|   ++|++++|+..      ...+.               .  .+.++.+|+++.
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G---~~V~~~~r~~~------~~~~~---------------~--~~~~~~~D~~~~   55 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARG---YRVAIASRNPE------EAAQS---------------L--GAVPLPTDLEKD   55 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCH------HHHHH---------------H--TCEEEECCTTTS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHH------HHHHh---------------h--CcEEEecCCchH
Confidence            6899999999999999999999999   68999998752      11110               0  267789999983


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHH----hcCCCCCceeC
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAK----ECVNLKRFCEL  177 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~v  177 (177)
                      ......+.+.+.+.++|++|||||...       ..+.|+..+++|+.++.++++.+.    +. +..++|++
T Consensus        56 ~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~g~iv~i  127 (239)
T 2ekp_A           56 DPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEA-GWGRVLFI  127 (239)
T ss_dssp             CHHHHHHHHHHHHTSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEE
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEE
Confidence            221111122223458999999999743       246788899999999999988874    33 56778764

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.53  E-value=1.9e-13  Score=104.52  Aligned_cols=118  Identities=11%  Similarity=0.116  Sum_probs=87.8

Q ss_pred             cCCCceEEEecC--CcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489         33 FYRDGQILVTGG--TGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS  110 (177)
Q Consensus        33 ~~~~~~vlVtG~--~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  110 (177)
                      .+++|+++||||  +|+||.++++.|++.|   ++|++.+|+..     +.+.+....            ...++.++.+
T Consensus         4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G---~~V~~~~r~~~-----~~~~~~~~~------------~~~~~~~~~~   63 (269)
T 2h7i_A            4 LLDGKRILVSGIITDSSIAFHIARVAQEQG---AQLVLTGFDRL-----RLIQRITDR------------LPAKAPLLEL   63 (269)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTT---CEEEEEECSCH-----HHHHHHHTT------------SSSCCCEEEC
T ss_pred             ccCCCEEEEECCCCCCchHHHHHHHHHHCC---CEEEEEecChH-----HHHHHHHHh------------cCCCceEEEc
Confidence            357899999999  9999999999999999   68999988652     111222110            1246788999


Q ss_pred             CCCCCCCCCCHHHHHHHhc----------CCcEEEEcCcccC------------chHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        111 NLESEHLGLSEDSEQLIKS----------KVNIIFHCAASLR------------FDEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       111 D~~~~~~~~~~~~~~~~~~----------~~d~vi~~aa~~~------------~~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                      |+++.      ++++.+++          ++|++|||||...            ..+.|+..+++|+.++.++++.+...
T Consensus        64 Dv~~~------~~v~~~~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  137 (269)
T 2h7i_A           64 DVQNE------EHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPI  137 (269)
T ss_dssp             CTTCH------HHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             cCCCH------HHHHHHHHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence            99998      56666554          7999999999653            13567888999999999999998763


Q ss_pred             -CCCCCcee
Q psy17489        169 -VNLKRFCE  176 (177)
Q Consensus       169 -~~~~~~v~  176 (177)
                       ..-.+||+
T Consensus       138 ~~~~g~iv~  146 (269)
T 2h7i_A          138 MNPGGSIVG  146 (269)
T ss_dssp             EEEEEEEEE
T ss_pred             hccCCeEEE
Confidence             01136665

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.52  E-value=7.2e-14  Score=105.84  Aligned_cols=107  Identities=16%  Similarity=0.168  Sum_probs=81.6

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      .+|+++||||+|+||.++++.|++.|   ++|++++|+....                           .-..+.+|+++
T Consensus        21 m~k~vlITGas~gIG~~la~~l~~~G---~~V~~~~r~~~~~---------------------------~~~~~~~d~~d   70 (251)
T 3orf_A           21 MSKNILVLGGSGALGAEVVKFFKSKS---WNTISIDFRENPN---------------------------ADHSFTIKDSG   70 (251)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCCTT---------------------------SSEEEECSCSS
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCcccc---------------------------cccceEEEeCC
Confidence            36899999999999999999999999   6899999976431                           12356788888


Q ss_pred             CCCCCCHHHHHHHhc-------CCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHhcC-CCCCceeC
Q psy17489        115 EHLGLSEDSEQLIKS-------KVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKECV-NLKRFCEL  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~~~v~v  177 (177)
                      .      +++..+++       ++|++|||||...        ..+.++..+++|+.++.++++++...- .-.+||++
T Consensus        71 ~------~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i  143 (251)
T 3orf_A           71 E------EEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLT  143 (251)
T ss_dssp             H------HHHHHHHHHHHTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             H------HHHHHHHHHHHHHcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEE
Confidence            7      56666554       5799999999632        245677889999999999999987641 11366653

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.52  E-value=5.5e-14  Score=108.32  Aligned_cols=122  Identities=10%  Similarity=0.122  Sum_probs=86.4

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++++++||||+|+||.++++.|++.|   ++|++++|+..      .+......     +.+   ....++.++.+|+
T Consensus        25 ~~~~k~vlITGasggIG~~la~~l~~~G---~~V~~~~r~~~------~~~~~~~~-----~~~---~~~~~~~~~~~Dl   87 (286)
T 1xu9_A           25 MLQGKKVIVTGASKGIGREMAYHLAKMG---AHVVVTARSKE------TLQKVVSH-----CLE---LGAASAHYIAGTM   87 (286)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESCHH------HHHHHHHH-----HHH---HTCSEEEEEECCT
T ss_pred             hcCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHH------HHHHHHHH-----HHH---hCCCceEEEeCCC
Confidence            4678999999999999999999999999   68999998652      22221110     000   0113678899999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEc-CcccC------chHHHHHHHHHhHHHHHHHHHHHHhc--CCCCCcee
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHC-AASLR------FDEALQKAIRANLYATKQMLNLAKEC--VNLKRFCE  176 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~-aa~~~------~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~  176 (177)
                      ++.      +++..+++       ++|++||| |+...      ..+.++..+++|+.++.++++.+...  .+..+||+
T Consensus        88 ~d~------~~v~~~~~~~~~~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~  161 (286)
T 1xu9_A           88 EDM------TFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVV  161 (286)
T ss_dssp             TCH------HHHHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred             CCH------HHHHHHHHHHHHHcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEE
Confidence            997      55655543       79999999 56532      24667788999999999998887542  02246765


Q ss_pred             C
Q psy17489        177 L  177 (177)
Q Consensus       177 v  177 (177)
                      +
T Consensus       162 i  162 (286)
T 1xu9_A          162 V  162 (286)
T ss_dssp             E
T ss_pred             E
Confidence            3

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.52  E-value=8.4e-14  Score=105.31  Aligned_cols=121  Identities=20%  Similarity=0.210  Sum_probs=86.1

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      ++++|+++||||+|+||.++++.|++.|   .+|+++.++.. ...++...+...             ...++.++.+|+
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G---~~v~~~~~~~~-~~~~~~~~~~~~-------------~~~~~~~~~~D~   66 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDG---ALVAIHYGNRK-EEAEETVYEIQS-------------NGGSAFSIGANL   66 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCS-HHHHHHHHHHHH-------------TTCEEEEEECCT
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCC---CeEEEEeCCch-HHHHHHHHHHHh-------------cCCceEEEecCc
Confidence            4678999999999999999999999999   57877654432 111111111111             235688899999


Q ss_pred             CCCCCCCCHHHHHHHhc-------------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc-CCC
Q psy17489        113 ESEHLGLSEDSEQLIKS-------------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC-VNL  171 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~  171 (177)
                      ++.      +.++.+++             ++|++|||||...       ..+.++..+++|+.++.++++.+... .+.
T Consensus        67 ~~~------~~~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~  140 (255)
T 3icc_A           67 ESL------HGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN  140 (255)
T ss_dssp             TSH------HHHHHHHHHHHHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE
T ss_pred             CCH------HHHHHHHHHHHHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCC
Confidence            997      55555443             2899999999743       24567788999999999999998764 122


Q ss_pred             CCcee
Q psy17489        172 KRFCE  176 (177)
Q Consensus       172 ~~~v~  176 (177)
                      .++|+
T Consensus       141 ~~iv~  145 (255)
T 3icc_A          141 SRIIN  145 (255)
T ss_dssp             EEEEE
T ss_pred             CEEEE
Confidence            35665

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.52  E-value=2e-14  Score=108.85  Aligned_cols=105  Identities=9%  Similarity=0.044  Sum_probs=82.1

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +|+++||||+|+||.++++.|++.|   ++|++++|+....                          .. . +.+|+++.
T Consensus         1 mk~vlVTGas~gIG~~~a~~l~~~G---~~V~~~~r~~~~~--------------------------~~-~-~~~Dl~~~   49 (257)
T 1fjh_A            1 MSIIVISGCATGIGAATRKVLEAAG---HQIVGIDIRDAEV--------------------------IA-D-LSTAEGRK   49 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSSSSE--------------------------EC-C-TTSHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCchhh--------------------------cc-c-cccCCCCH
Confidence            3689999999999999999999999   6899999875321                          00 1 56788887


Q ss_pred             CCCCCHHHHHHHhc----CCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCceeC
Q psy17489        116 HLGLSEDSEQLIKS----KVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKEC---VNLKRFCEL  177 (177)
Q Consensus       116 ~~~~~~~~~~~~~~----~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~v  177 (177)
                            ++++.+++    ++|++|||||.......++..+++|+.++.++++++.+.   .+..+||++
T Consensus        50 ------~~v~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~i  112 (257)
T 1fjh_A           50 ------QAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVI  112 (257)
T ss_dssp             ------HHHHHHHTTCTTCCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEE
T ss_pred             ------HHHHHHHHHhCCCCCEEEECCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEE
Confidence                  67777764    569999999986534568889999999999999988632   255678764

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.52  E-value=1.3e-13  Score=104.68  Aligned_cols=113  Identities=16%  Similarity=0.173  Sum_probs=82.9

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHh---hCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLR---SFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS  110 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~---~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  110 (177)
                      +++|+++||||+|+||.++++.|++   .|   ++|++++|+..      .+.+....     +....  ...++.++.+
T Consensus         4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G---~~V~~~~r~~~------~~~~~~~~-----l~~~~--~~~~~~~~~~   67 (259)
T 1oaa_A            4 LGCAVCVLTGASRGFGRALAPQLARLLSPG---SVMLVSARSES------MLRQLKEE-----LGAQQ--PDLKVVLAAA   67 (259)
T ss_dssp             CBSEEEEESSCSSHHHHHHHHHHHTTBCTT---CEEEEEESCHH------HHHHHHHH-----HHHHC--TTSEEEEEEC
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHhhcCC---CeEEEEeCCHH------HHHHHHHH-----HHhhC--CCCeEEEEec
Confidence            5689999999999999999999999   78   68999998642      22221110     00000  1246889999


Q ss_pred             CCCCCCCCCCHHHHHHHhc---------CCc--EEEEcCcccC----------chHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        111 NLESEHLGLSEDSEQLIKS---------KVN--IIFHCAASLR----------FDEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       111 D~~~~~~~~~~~~~~~~~~---------~~d--~vi~~aa~~~----------~~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                      |+++.      +++..+++         ++|  ++|||||...          ..+.|+..+++|+.++.++++.+...
T Consensus        68 Dv~~~------~~v~~~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  140 (259)
T 1oaa_A           68 DLGTE------AGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNA  140 (259)
T ss_dssp             CTTSH------HHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHT
T ss_pred             CCCCH------HHHHHHHHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99998      56655442         468  9999999742          23667889999999999999998764

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.52  E-value=6.4e-15  Score=114.47  Aligned_cols=110  Identities=17%  Similarity=0.225  Sum_probs=74.4

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +.+|+|+||||+||||+++++.|++.|   ++|++++|+......           ..+.+...  ....++.++.+|+.
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~-----------~~~~~~~~--~~~~~~~~~~~Dl~   68 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVASG---EEVTVLDDLRVPPMI-----------PPEGTGKF--LEKPVLELEERDLS   68 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTT---CCEEEECCCSSCCSS-----------CCTTSSEE--ECSCGGGCCHHHHT
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHCC---CEEEEEecCCccccc-----------chhhhhhh--ccCCCeeEEeCccc
Confidence            357899999999999999999999999   589999997641000           00000000  00012333333322


Q ss_pred             CCCCCCCHHHHHHHhcCCcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        114 SEHLGLSEDSEQLIKSKVNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                                      ++|+|||+|+.....   ......++ |+.++.+++++|++. ++++|||+
T Consensus        69 ----------------~~d~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~-~v~~~v~~  117 (321)
T 3vps_A           69 ----------------DVRLVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSV-GVPKVVVG  117 (321)
T ss_dssp             ----------------TEEEEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHH-TCCEEEEE
T ss_pred             ----------------cCCEEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHc-CCCeEEEe
Confidence                            779999999986532   22334567 999999999999998 79999984

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.51  E-value=8.8e-14  Score=108.46  Aligned_cols=104  Identities=20%  Similarity=0.370  Sum_probs=81.1

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC-CCCCh--HHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK-KGSSP--EERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      +|+|+||||+|++|+++++.|++.|   ++|++++|+. .....  .+.+..+.               ..++.++.+|+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~~~~~~~~l~~~~---------------~~~v~~v~~D~   65 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFS---HPTFIYARPLTPDSTPSSVQLREEFR---------------SMGVTIIEGEM   65 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTT---CCEEEEECCCCTTCCHHHHHHHHHHH---------------HTTCEEEECCT
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCC---CcEEEEECCcccccChHHHHHHHHhh---------------cCCcEEEEecC
Confidence            5789999999999999999999998   5899999975 22111  11111111               14688999999


Q ss_pred             CCCCCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCC-CCCcee
Q psy17489        113 ESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVN-LKRFCE  176 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~~~v~  176 (177)
                      .+.      +++..+++++|+|||+++...            +.++.+++++|++. + ++|||+
T Consensus        66 ~d~------~~l~~a~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~-g~v~~~v~  111 (321)
T 3c1o_A           66 EEH------EKMVSVLKQVDIVISALPFPM------------ISSQIHIINAIKAA-GNIKRFLP  111 (321)
T ss_dssp             TCH------HHHHHHHTTCSEEEECCCGGG------------SGGGHHHHHHHHHH-CCCCEEEC
T ss_pred             CCH------HHHHHHHcCCCEEEECCCccc------------hhhHHHHHHHHHHh-CCccEEec
Confidence            998      789999999999999999643            45667899999988 6 889874

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.49  E-value=1.1e-13  Score=105.31  Aligned_cols=119  Identities=9%  Similarity=0.092  Sum_probs=84.4

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++++|+..      .+......     +    .....++.++.+|++
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~------~~~~~~~~-----~----~~~~~~~~~~~~Dv~   64 (260)
T 2qq5_A            3 MNGQVCVVTGASRGIGRGIALQLCKAG---ATVYITGRHLD------TLRVVAQE-----A----QSLGGQCVPVVCDSS   64 (260)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESCHH------HHHHHHHH-----H----HHHSSEEEEEECCTT
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHH------HHHHHHHH-----H----HHcCCceEEEECCCC
Confidence            568999999999999999999999999   68999988642      22211110     0    001246888999999


Q ss_pred             CCCCCCCHHHHHHH--------hcCCcEEEEcCc--cc--------C----chHHHHHHHHHhHHHHHHHHHHHH----h
Q psy17489        114 SEHLGLSEDSEQLI--------KSKVNIIFHCAA--SL--------R----FDEALQKAIRANLYATKQMLNLAK----E  167 (177)
Q Consensus       114 ~~~~~~~~~~~~~~--------~~~~d~vi~~aa--~~--------~----~~~~~~~~~~~nv~~~~~ll~~~~----~  167 (177)
                      +.      +++..+        +.++|++|||||  ..        .    ..+.|+..+++|+.++.++.+.+.    +
T Consensus        65 ~~------~~v~~~~~~~~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~  138 (260)
T 2qq5_A           65 QE------SEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVP  138 (260)
T ss_dssp             SH------HHHHHHHHHHHHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGG
T ss_pred             CH------HHHHHHHHHHHHhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhh
Confidence            97      555544        346899999994  21        1    135678889999999988877764    3


Q ss_pred             cCCCCCceeC
Q psy17489        168 CVNLKRFCEL  177 (177)
Q Consensus       168 ~~~~~~~v~v  177 (177)
                      . +..+||++
T Consensus       139 ~-~~g~iv~i  147 (260)
T 2qq5_A          139 A-GQGLIVVI  147 (260)
T ss_dssp             G-TCCEEEEE
T ss_pred             c-CCcEEEEE
Confidence            3 45677764

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.49  E-value=5.7e-13  Score=110.98  Aligned_cols=124  Identities=16%  Similarity=0.244  Sum_probs=91.1

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEE-EeCCCC-----------CChHHHHHHHHhhhhhhcccccCcc
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM-VRDKKG-----------SSPEERVKNMLNSVIFDRLNKEVPD  100 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~-~r~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~  100 (177)
                      ...+++++||||+|+||.++++.|.+.|.  ..|+.+ +|+...           ....+.+.++..             
T Consensus       248 ~~~~~~vLITGgsgGIG~~lA~~La~~G~--~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~-------------  312 (525)
T 3qp9_A          248 WQADGTVLVTGAEEPAAAEAARRLARDGA--GHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELAD-------------  312 (525)
T ss_dssp             SCTTSEEEESSTTSHHHHHHHHHHHHHTC--CEEEEEECCCC---------------CHHHHHHHHH-------------
T ss_pred             ecCCCEEEEECCCCcHHHHHHHHHHHcCC--CEEEEEeCCCCCCccccccccccCHHHHHHHHHHHh-------------
Confidence            44689999999999999999999999984  346766 787422           112222222111             


Q ss_pred             cCCCeEEEeCCCCCCCCCCCHHHHHHHhc------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        101 FRSKIQVIPSNLESEHLGLSEDSEQLIKS------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       101 ~~~~v~~~~~D~~~~~~~~~~~~~~~~~~------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      ...++.++.+|++|.      +++..+++      ++|+||||||...       ..+.++..+++|+.++.++.+.+..
T Consensus       313 ~g~~v~~~~~Dvtd~------~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~  386 (525)
T 3qp9_A          313 LGATATVVTCDLTDA------EAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLRE  386 (525)
T ss_dssp             HTCEEEEEECCTTSH------HHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCEEEEEECCCCCH------HHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            235789999999998      78888775      4699999999753       2466788999999999999999987


Q ss_pred             cCC----CCCceeC
Q psy17489        168 CVN----LKRFCEL  177 (177)
Q Consensus       168 ~~~----~~~~v~v  177 (177)
                      ...    ..+||++
T Consensus       387 ~~~~~~~~~~iV~~  400 (525)
T 3qp9_A          387 AAAAGGRPPVLVLF  400 (525)
T ss_dssp             TC----CCCEEEEE
T ss_pred             ccccCCCCCEEEEE
Confidence            621    6677764

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.49  E-value=6.9e-14  Score=102.25  Aligned_cols=99  Identities=18%  Similarity=0.222  Sum_probs=78.7

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+++||||+|+||+++++.|+ .|   ++|++++|+..                                .+.+|++++ 
T Consensus         4 M~vlVtGasg~iG~~~~~~l~-~g---~~V~~~~r~~~--------------------------------~~~~D~~~~-   46 (202)
T 3d7l_A            4 MKILLIGASGTLGSAVKERLE-KK---AEVITAGRHSG--------------------------------DVTVDITNI-   46 (202)
T ss_dssp             CEEEEETTTSHHHHHHHHHHT-TT---SEEEEEESSSS--------------------------------SEECCTTCH-
T ss_pred             cEEEEEcCCcHHHHHHHHHHH-CC---CeEEEEecCcc--------------------------------ceeeecCCH-
Confidence            489999999999999999999 88   68999988641                                367899987 


Q ss_pred             CCCCHHHHHHHhc---CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhcC-CCCCceeC
Q psy17489        117 LGLSEDSEQLIKS---KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKECV-NLKRFCEL  177 (177)
Q Consensus       117 ~~~~~~~~~~~~~---~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~~~v~v  177 (177)
                           ++++.+++   ++|+|||+||...       ..+.+...+++|+.++.++++++.+.- +-.+||++
T Consensus        47 -----~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~  113 (202)
T 3d7l_A           47 -----DSIKKMYEQVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLT  113 (202)
T ss_dssp             -----HHHHHHHHHHCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEE
T ss_pred             -----HHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEE
Confidence                 67777766   4899999999643       135677889999999999999987651 11466653

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.48  E-value=2.6e-13  Score=107.71  Aligned_cols=105  Identities=16%  Similarity=0.134  Sum_probs=82.4

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC-CCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN-LES  114 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D-~~~  114 (177)
                      +|+|+||||+|+||+++++.|++.|   ++|++++|+....    ....+.              ...++.++.+| +++
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~----~~~~l~--------------~~~~v~~v~~D~l~d   63 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVG---HHVRAQVHSLKGL----IAEELQ--------------AIPNVTLFQGPLLNN   63 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTT---CCEEEEESCSCSH----HHHHHH--------------TSTTEEEEESCCTTC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCC---CEEEEEECCCChh----hHHHHh--------------hcCCcEEEECCccCC
Confidence            6789999999999999999999998   5899999876431    111110              11468899999 998


Q ss_pred             CCCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCC-CCCceeC
Q psy17489        115 EHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVN-LKRFCEL  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~~~v~v  177 (177)
                      .      +++..+++++|.|||+++....        ..|..+ .+++++|++. + +++|||+
T Consensus        64 ~------~~l~~~~~~~d~Vi~~a~~~~~--------~~~~~~-~~l~~aa~~~-g~v~~~V~~  111 (352)
T 1xgk_A           64 V------PLMDTLFEGAHLAFINTTSQAG--------DEIAIG-KDLADAAKRA-GTIQHYIYS  111 (352)
T ss_dssp             H------HHHHHHHTTCSEEEECCCSTTS--------CHHHHH-HHHHHHHHHH-SCCSEEEEE
T ss_pred             H------HHHHHHHhcCCEEEEcCCCCCc--------HHHHHH-HHHHHHHHHc-CCccEEEEe
Confidence            7      7899999999999999975321        336666 8999999998 7 8999985

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.48  E-value=3.8e-13  Score=110.23  Aligned_cols=118  Identities=17%  Similarity=0.172  Sum_probs=88.9

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+.+++++||||+|+||.++++.|.+.|   .+|++++|+...    +.+.+....              ..+.++.+|+
T Consensus       210 ~l~gk~~LVTGgsgGIG~aiA~~La~~G---a~Vvl~~r~~~~----~~l~~~~~~--------------~~~~~~~~Dv  268 (454)
T 3u0b_A          210 PLDGKVAVVTGAARGIGATIAEVFARDG---ATVVAIDVDGAA----EDLKRVADK--------------VGGTALTLDV  268 (454)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEECGGGH----HHHHHHHHH--------------HTCEEEECCT
T ss_pred             CCCCCEEEEeCCchHHHHHHHHHHHHCC---CEEEEEeCCccH----HHHHHHHHH--------------cCCeEEEEec
Confidence            4578999999999999999999999999   689988886422    333332221              2456899999


Q ss_pred             CCCCCCCCHHHHHHHhc-------C-CcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhcC---CCCCc
Q psy17489        113 ESEHLGLSEDSEQLIKS-------K-VNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKECV---NLKRF  174 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~-~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~~---~~~~~  174 (177)
                      ++.      +++..+++       + +|+||||||...       ..+.|+..+++|+.++.++.+.+....   +..+|
T Consensus       269 td~------~~v~~~~~~~~~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~i  342 (454)
T 3u0b_A          269 TAD------DAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRV  342 (454)
T ss_dssp             TST------THHHHHHHHHHHHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEE
T ss_pred             CCH------HHHHHHHHHHHHHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEE
Confidence            998      55555543       3 999999999853       246788899999999999999987641   34567


Q ss_pred             eeC
Q psy17489        175 CEL  177 (177)
Q Consensus       175 v~v  177 (177)
                      |++
T Consensus       343 V~i  345 (454)
T 3u0b_A          343 IGL  345 (454)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            653

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.48  E-value=2.3e-13  Score=105.19  Aligned_cols=95  Identities=16%  Similarity=0.168  Sum_probs=70.3

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+|+||||+||||+++++.|++.|   ++|++++|++...                           ++   ..|     
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G---~~V~~l~R~~~~~---------------------------~~---~~~-----   42 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARG---HEVTLVSRKPGPG---------------------------RI---TWD-----   42 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCCTT---------------------------EE---EHH-----
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCCCcC---------------------------ee---ecc-----
Confidence            689999999999999999999999   5899999975321                           11   111     


Q ss_pred             CCCCHHHHHHHhcCCcEEEEcCccc--C-----chHHHHHHHHHhHHHHHHHHHHHHhcCCCCCce
Q psy17489        117 LGLSEDSEQLIKSKVNIIFHCAASL--R-----FDEALQKAIRANLYATKQMLNLAKECVNLKRFC  175 (177)
Q Consensus       117 ~~~~~~~~~~~~~~~d~vi~~aa~~--~-----~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v  175 (177)
                           +.....++++|.|||+|+..  .     .......+++.|+.++.+++++++.. +.++.+
T Consensus        43 -----~~~~~~l~~~d~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~-~~~~~~  102 (298)
T 4b4o_A           43 -----ELAASGLPSCDAAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKA-PQPPKA  102 (298)
T ss_dssp             -----HHHHHCCCSCSEEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHC-SSCCSE
T ss_pred             -----hhhHhhccCCCEEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHh-CCCceE
Confidence                 22234467899999999842  1     12334567899999999999999987 555533

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.46  E-value=1.2e-12  Score=99.67  Aligned_cols=113  Identities=11%  Similarity=0.109  Sum_probs=84.2

Q ss_pred             cCCCceEEEecCCc--chHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489         33 FYRDGQILVTGGTG--FMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS  110 (177)
Q Consensus        33 ~~~~~~vlVtG~~G--~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  110 (177)
                      .++||+++||||+|  +||.++++.|.+.|   ++|++.+|++..   .+++.+...+           ....++.++++
T Consensus         3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~G---a~Vvi~~r~~~~---~~~~~~~~~~-----------~~~~~~~~~~~   65 (256)
T 4fs3_A            3 NLENKTYVIMGIANKRSIAFGVAKVLDQLG---AKLVFTYRKERS---RKELEKLLEQ-----------LNQPEAHLYQI   65 (256)
T ss_dssp             CCTTCEEEEECCCSTTCHHHHHHHHHHHTT---CEEEEEESSGGG---HHHHHHHHGG-----------GTCSSCEEEEC
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCC---CEEEEEECCHHH---HHHHHHHHHh-----------cCCCcEEEEEc
Confidence            46899999999876  89999999999999   699999997532   1333333221           01247889999


Q ss_pred             CCCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc-----------hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        111 NLESEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF-----------DEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       111 D~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-----------~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                      |++++      +++..++       .++|++|||||....           .+.|...+++|+.+...+.+.+...
T Consensus        66 Dv~~~------~~v~~~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~  135 (256)
T 4fs3_A           66 DVQSD------EEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKL  135 (256)
T ss_dssp             CTTCH------HHHHHHHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTT
T ss_pred             cCCCH------HHHHHHHHHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99998      5555543       479999999996431           2456677899999999988887653

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.46  E-value=1.9e-13  Score=101.63  Aligned_cols=91  Identities=14%  Similarity=0.116  Sum_probs=75.7

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++.+|+.                             .      +|++
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~l~~~G---~~V~~~~r~~-----------------------------~------~D~~   45 (223)
T 3uce_A            4 SDKTVYVVLGGTSGIGAELAKQLESEH---TIVHVASRQT-----------------------------G------LDIS   45 (223)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHCSTT---EEEEEESGGG-----------------------------T------CCTT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEecCCc-----------------------------c------cCCC
Confidence            468999999999999999999999999   6899888753                             1      6888


Q ss_pred             CCCCCCCHHHHHHHhc---CCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        114 SEHLGLSEDSEQLIKS---KVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~---~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                      +.      ++++.+++   ++|++|||||...        ..+.++..+++|+.++.++++.+.+.
T Consensus        46 ~~------~~v~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~  105 (223)
T 3uce_A           46 DE------KSVYHYFETIGAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARY  105 (223)
T ss_dssp             CH------HHHHHHHHHHCSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred             CH------HHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhh
Confidence            87      66666654   7899999999752        24678889999999999999998764

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.41  E-value=1.1e-12  Score=100.47  Aligned_cols=96  Identities=15%  Similarity=0.096  Sum_probs=73.4

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +|+|+|||| ||||+++++.|++.|   ++|++++|++...   ..+.                  ..++.++.+|+.+.
T Consensus         5 ~~~ilVtGa-G~iG~~l~~~L~~~g---~~V~~~~r~~~~~---~~~~------------------~~~~~~~~~D~~d~   59 (286)
T 3ius_A            5 TGTLLSFGH-GYTARVLSRALAPQG---WRIIGTSRNPDQM---EAIR------------------ASGAEPLLWPGEEP   59 (286)
T ss_dssp             CCEEEEETC-CHHHHHHHHHHGGGT---CEEEEEESCGGGH---HHHH------------------HTTEEEEESSSSCC
T ss_pred             cCcEEEECC-cHHHHHHHHHHHHCC---CEEEEEEcChhhh---hhHh------------------hCCCeEEEeccccc
Confidence            479999998 999999999999999   5899999975321   1111                  14789999999985


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhc-CCCCCceeC
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKEC-VNLKRFCEL  177 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~v  177 (177)
                            +     ++++|+|||+|+.......          .+.++++++++. .++++|||+
T Consensus        60 ------~-----~~~~d~vi~~a~~~~~~~~----------~~~~l~~a~~~~~~~~~~~v~~  101 (286)
T 3ius_A           60 ------S-----LDGVTHLLISTAPDSGGDP----------VLAALGDQIAARAAQFRWVGYL  101 (286)
T ss_dssp             ------C-----CTTCCEEEECCCCBTTBCH----------HHHHHHHHHHHTGGGCSEEEEE
T ss_pred             ------c-----cCCCCEEEECCCccccccH----------HHHHHHHHHHhhcCCceEEEEe
Confidence                  3     6789999999998654322          235788888873 288999984

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.41  E-value=1.8e-12  Score=101.67  Aligned_cols=119  Identities=19%  Similarity=0.216  Sum_probs=80.3

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC------CCChHHHHHHHHhhhhhhcccccCcccCCCeEE
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK------GSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQV  107 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  107 (177)
                      +++|+++||||+|+||.++++.|++.|   ++|++.++...      .....+.+.+.+..            ...   .
T Consensus         7 l~gk~~lVTGas~GIG~~~a~~La~~G---a~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~------------~~~---~   68 (319)
T 1gz6_A            7 FDGRVVLVTGAGGGLGRAYALAFAERG---ALVVVNDLGGDFKGVGKGSSAADKVVEEIRR------------RGG---K   68 (319)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEECCCBCTTSCBCCSHHHHHHHHHHHH------------TTC---E
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEcCCcccccccCCHHHHHHHHHHHHh------------hCC---e
Confidence            578999999999999999999999999   68888766321      11111111111110            011   1


Q ss_pred             EeCCCCCCCCCCCHHHHHHH-------hcCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHH----hcC
Q psy17489        108 IPSNLESEHLGLSEDSEQLI-------KSKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAK----ECV  169 (177)
Q Consensus       108 ~~~D~~~~~~~~~~~~~~~~-------~~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~----~~~  169 (177)
                      ..+|+.+.      +++..+       +.++|+||||||....       .+.++..+++|+.++.++++++.    +. 
T Consensus        69 ~~~D~~~~------~~~~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-  141 (319)
T 1gz6_A           69 AVANYDSV------EAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQ-  141 (319)
T ss_dssp             EEEECCCG------GGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred             EEEeCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-
Confidence            24688776      333333       3479999999997432       35678899999999999988874    33 


Q ss_pred             CCCCceeC
Q psy17489        170 NLKRFCEL  177 (177)
Q Consensus       170 ~~~~~v~v  177 (177)
                      +..+||++
T Consensus       142 ~~grIV~v  149 (319)
T 1gz6_A          142 NYGRIIMT  149 (319)
T ss_dssp             TCEEEEEE
T ss_pred             CCCEEEEE
Confidence            45678764

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.39  E-value=6.4e-13  Score=100.10  Aligned_cols=119  Identities=18%  Similarity=0.199  Sum_probs=76.3

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++|+++||||+|+||.++++.|++ |   ..|++++|+.      +.+.....              ..++.++.+|+.
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~-g---~~v~~~~r~~------~~~~~~~~--------------~~~~~~~~~D~~   58 (245)
T 3e9n_A            3 LKKKIAVVTGATGGMGIEIVKDLSR-D---HIVYALGRNP------EHLAALAE--------------IEGVEPIESDIV   58 (245)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHTT-T---SEEEEEESCH------HHHHHHHT--------------STTEEEEECCHH
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHhC-C---CeEEEEeCCH------HHHHHHHh--------------hcCCcceecccc
Confidence            4689999999999999999999987 6   5899988864      22222211              246888999988


Q ss_pred             CCCCCCCHHHHHHHhcCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCceeC
Q psy17489        114 SEHLGLSEDSEQLIKSKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VNLKRFCEL  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~v  177 (177)
                      +.............+.++|++|||||....       .+.++..+++|+.++.++++.+...   .+ .++|++
T Consensus        59 ~~~~~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~i  131 (245)
T 3e9n_A           59 KEVLEEGGVDKLKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYI  131 (245)
T ss_dssp             HHHHTSSSCGGGTTCSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEE
T ss_pred             hHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEE
Confidence            752100001111123478999999997532       3567788999999999988876432   12 466653

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.38  E-value=5.5e-13  Score=104.87  Aligned_cols=119  Identities=12%  Similarity=0.109  Sum_probs=79.2

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCC----CcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFP----DIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS  110 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~----~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  110 (177)
                      +.++|+||||+||||++++..|+..|+    ....|+++++.+..    ++......+ ..        +  ..+.++ +
T Consensus         3 ~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~----~~~~g~~~d-l~--------~--~~~~~~-~   66 (327)
T 1y7t_A            3 APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAM----KALEGVVME-LE--------D--CAFPLL-A   66 (327)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGH----HHHHHHHHH-HH--------T--TTCTTE-E
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCch----hhccchhhh-hh--------c--cccccc-C
Confidence            346899999999999999999999874    11278888775310    111110000 00        0  011122 4


Q ss_pred             CCCCCCCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhcCC-CC-Ccee
Q psy17489        111 NLESEHLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKECVN-LK-RFCE  176 (177)
Q Consensus       111 D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~-~~v~  176 (177)
                      |+.+.      ..+..+++++|+|||+||.... .++..++++.|+.++.++++.++++ + .+ +|++
T Consensus        67 di~~~------~~~~~a~~~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~-~~~~~~vvv  128 (327)
T 1y7t_A           67 GLEAT------DDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEV-AKKDVKVLV  128 (327)
T ss_dssp             EEEEE------SCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-SCTTCEEEE
T ss_pred             CeEec------cChHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-cCCCeEEEE
Confidence            66554      3466778899999999997643 3455678999999999999999987 4 44 5554

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.36  E-value=2.3e-13  Score=108.26  Aligned_cols=91  Identities=23%  Similarity=0.239  Sum_probs=73.6

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+|+||||+||||+++++.|++.|+  .+|++++|+                                        .+. 
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~--~~v~~~d~~----------------------------------------~d~-   37 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTD--HHIFEVHRQ----------------------------------------TKE-   37 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCC--CEEEECCTT----------------------------------------CCH-
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC--CEEEEECCC----------------------------------------CCH-
Confidence            5899999999999999999999983  266665542                                        233 


Q ss_pred             CCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCC-CceeC
Q psy17489        117 LGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLK-RFCEL  177 (177)
Q Consensus       117 ~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~-~~v~v  177 (177)
                           +.+..+++++|+|||+||.... .++..++++|+.++.+++++|++. +++ +|||+
T Consensus        38 -----~~l~~~~~~~d~Vih~a~~~~~-~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~~   92 (369)
T 3st7_A           38 -----EELESALLKADFIVHLAGVNRP-EHDKEFSLGNVSYLDHVLDILTRN-TKKPAILLS   92 (369)
T ss_dssp             -----HHHHHHHHHCSEEEECCCSBCT-TCSTTCSSSCCBHHHHHHHHHTTC-SSCCEEEEE
T ss_pred             -----HHHHHHhccCCEEEECCcCCCC-CCHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEe
Confidence                 6778888899999999997653 344557789999999999999998 766 89874

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.36  E-value=2.4e-12  Score=97.57  Aligned_cols=118  Identities=9%  Similarity=-0.000  Sum_probs=76.7

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+++||||+|+||.++++.|++.|   ++|++++|+...  . +.+.+ +..            ...++..+  |..+..
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~--~-~~~~~-l~~------------~~~~~~~~--d~~~v~   60 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAG---HTVACHDESFKQ--K-DELEA-FAE------------TYPQLKPM--SEQEPA   60 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTT---CEEEECCGGGGS--H-HHHHH-HHH------------HCTTSEEC--CCCSHH
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHH--H-HHHHH-HHh------------cCCcEEEE--CHHHHH
Confidence            689999999999999999999999   689999987532  1 22222 111            01233333  332220


Q ss_pred             CCCCHHHHHHHhcCCcEEEEcCccc-C-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCceeC
Q psy17489        117 LGLSEDSEQLIKSKVNIIFHCAASL-R-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFCEL  177 (177)
Q Consensus       117 ~~~~~~~~~~~~~~~d~vi~~aa~~-~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~v  177 (177)
                        ...+.+.+.+.++|++|||||.. .       ..+.++..+++|+.++.++++.+...   .+..+||++
T Consensus        61 --~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~i  130 (254)
T 1zmt_A           61 --ELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFI  130 (254)
T ss_dssp             --HHHHHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred             --HHHHHHHHHhCCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEE
Confidence              00012222334899999999975 2       13567889999999999998887531   145677764

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.34  E-value=7.3e-12  Score=106.09  Aligned_cols=120  Identities=13%  Similarity=0.074  Sum_probs=78.3

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC-------CCCChHHHHHHHHhhhhhhcccccCcccCCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK-------KGSSPEERVKNMLNSVIFDRLNKEVPDFRSK  104 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      ..++||+++||||+|+||.++++.|++.|   ++|++.+|..       .....++...+ +..            ....
T Consensus        15 ~~l~gk~~lVTGas~GIG~aiA~~La~~G---a~Vv~~~r~~~~~~~~~~~~~~~~~~~~-i~~------------~~~~   78 (613)
T 3oml_A           15 LRYDGRVAVVTGAGAGLGREYALLFAERG---AKVVVNDLGGTHSGDGASQRAADIVVDE-IRK------------AGGE   78 (613)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEC--------------CHHHHHHH-HHH------------TTCC
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCcccccccCCHHHHHHHHHH-HHH------------hCCe
Confidence            34689999999999999999999999999   6899888722       11222222222 111            1122


Q ss_pred             eEEEeCCCCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHH----
Q psy17489        105 IQVIPSNLESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAK----  166 (177)
Q Consensus       105 v~~~~~D~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~----  166 (177)
                         ..+|+++.      +++..+++       ++|++|||||...       ..+.|+..+++|+.++.++++++.    
T Consensus        79 ---~~~D~~d~------~~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~  149 (613)
T 3oml_A           79 ---AVADYNSV------IDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMK  149 (613)
T ss_dssp             ---EEECCCCG------GGHHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---EEEEeCCH------HHHHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence               23677776      44555443       6899999999753       246788899999999999999873    


Q ss_pred             hcCCCCCceeC
Q psy17489        167 ECVNLKRFCEL  177 (177)
Q Consensus       167 ~~~~~~~~v~v  177 (177)
                      +. +..+||++
T Consensus       150 ~~-~~g~IV~i  159 (613)
T 3oml_A          150 KQ-NYGRIIMT  159 (613)
T ss_dssp             TT-TCEEEEEE
T ss_pred             Hc-CCCEEEEE
Confidence            33 44577764

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.32  E-value=6.6e-12  Score=94.58  Aligned_cols=112  Identities=11%  Similarity=0.009  Sum_probs=74.6

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEE-E--eCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM-V--RDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~-~--r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      ||+++||||+|+||.++++.|++.|   ++|+++ +  |+.      +.+......     +        ......  |.
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~~~~r~~------~~~~~~~~~-----~--------~~~~~~--~~   56 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDG---YTVVCHDASFADA------AERQRFESE-----N--------PGTIAL--AE   56 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTT---CEEEECCGGGGSH------HHHHHHHHH-----S--------TTEEEC--CC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCC---CEEEEecCCcCCH------HHHHHHHHH-----h--------CCCccc--CH
Confidence            5789999999999999999999999   688888 5  754      222222211     0        011111  22


Q ss_pred             CCCCCCCCHHHHHHH---hcCCcEEEEcCcccCc----------hHHHHHHHHHhHHHHHHHHHHHHh----cCCCCCce
Q psy17489        113 ESEHLGLSEDSEQLI---KSKVNIIFHCAASLRF----------DEALQKAIRANLYATKQMLNLAKE----CVNLKRFC  175 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~---~~~~d~vi~~aa~~~~----------~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v  175 (177)
                      .+..     ..++.+   +.++|++|||||....          .+.|+..+++|+.++.++++.+..    . +..+||
T Consensus        57 ~~v~-----~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv  130 (244)
T 1zmo_A           57 QKPE-----RLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAA-GGASVI  130 (244)
T ss_dssp             CCGG-----GHHHHHGGGSSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEE
T ss_pred             HHHH-----HHHHHHHHHcCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEE
Confidence            2221     223333   3478999999996432          367888999999999999888753    3 456777


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       131 ~i  132 (244)
T 1zmo_A          131 FI  132 (244)
T ss_dssp             EE
T ss_pred             EE
Confidence            64

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.21  E-value=1.3e-10  Score=104.80  Aligned_cols=113  Identities=18%  Similarity=0.229  Sum_probs=81.0

Q ss_pred             CCCceEEEecCCcc-hHHHHHHHHHhhCCCcCeEEEEE-eCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         34 YRDGQILVTGGTGF-MGKLLIDKLLRSFPDIGAIYIMV-RDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        34 ~~~~~vlVtG~~G~-iG~~l~~~L~~~g~~~~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      +++|+++||||+|+ ||.++++.|++.|   ++|++++ |+.....  +...++         ..+......++.++.+|
T Consensus       474 L~GKvALVTGASgGGIGrAIAr~LA~~G---A~VVL~~~R~~e~le--e~a~eL---------~ael~a~Ga~V~vV~~D  539 (1688)
T 2pff_A          474 FKDKYVLITGAGKGSIGAEVLQGLLQGG---AKVVVTTSRFSKQVT--DYYQSI---------YAKYGAKGSTLIVVPFN  539 (1688)
T ss_dssp             CCSCCEEECSCSSSSTHHHHHHHHHHHT---CEEEEEESSCSTTTT--THHHHT---------TTTTCCTTCEEEEEECC
T ss_pred             cCCCEEEEECCChHHHHHHHHHHHHHCc---CEEEEEeCCCHHHHH--HHHHHH---------HHHhhcCCCeEEEEEeC
Confidence            57899999999998 9999999999999   6888874 5432211  111111         11111123468899999


Q ss_pred             CCCCCCCCCHHHHHHHhc-------------CCcEEEEcCcccCc----------hHHHHHHHHHhHHHHHHHHHHHH
Q psy17489        112 LESEHLGLSEDSEQLIKS-------------KVNIIFHCAASLRF----------DEALQKAIRANLYATKQMLNLAK  166 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~-------------~~d~vi~~aa~~~~----------~~~~~~~~~~nv~~~~~ll~~~~  166 (177)
                      +++.      +++..+++             ++|++|||||....          .+.|+..+++|+.++..+++.++
T Consensus       540 VTD~------esVeaLVe~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~  611 (1688)
T 2pff_A          540 QGSK------QDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQK  611 (1688)
T ss_dssp             SSST------THHHHHHHHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred             CCCH------HHHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9998      55655432             58999999996421          35678889999999999999873

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.20  E-value=4.8e-11  Score=103.77  Aligned_cols=119  Identities=18%  Similarity=0.340  Sum_probs=89.9

Q ss_pred             CCCceEEEecCCcchHHHHHHHHH-hhCCCcCeEEEEEeCCCC-CChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLL-RSFPDIGAIYIMVRDKKG-SSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~-~~g~~~~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      ..+++++||||+|+||..+++.|. +.|.  .+|+.++|+... ....+.+.++..             ...++.++.+|
T Consensus       528 ~~~~~~lItGg~~GlG~aiA~~la~~~Ga--~~vvl~~R~~~~~~~~~~~~~~l~~-------------~G~~v~~~~~D  592 (795)
T 3slk_A          528 DAAGTVLVTGGTGALGAEVARHLVIERGV--RNLVLVSRRGPAASGAAELVAQLTA-------------YGAEVSLQACD  592 (795)
T ss_dssp             CTTSEEEEETTTSHHHHHHHHHHHHTSSC--CEEEEEESSGGGSTTHHHHHHHHHH-------------TTCEEEEEECC
T ss_pred             ccccceeeccCCCCcHHHHHHHHHHHcCC--cEEEEeccCccchHHHHHHHHHHHh-------------cCCcEEEEEee
Confidence            457899999999999999999999 7883  468999998432 333333333322             23578899999


Q ss_pred             CCCCCCCCCHHHHHHHhc------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhcCCCCCcee
Q psy17489        112 LESEHLGLSEDSEQLIKS------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKECVNLKRFCE  176 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~  176 (177)
                      +++.      +++..+++      ++|++|||||...       ..+.|+..+++|+.+++++.+++..  .. +||+
T Consensus       593 vsd~------~~v~~~~~~~~~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~--~l-~iV~  661 (795)
T 3slk_A          593 VADR------ETLAKVLASIPDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDP--DV-ALVL  661 (795)
T ss_dssp             TTCH------HHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCT--TS-EEEE
T ss_pred             cCCH------HHHHHHHHHHHHhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhh--CC-EEEE
Confidence            9998      77887765      4799999999753       1467888999999999999998732  33 5554

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.17  E-value=2.1e-10  Score=96.96  Aligned_cols=123  Identities=12%  Similarity=0.107  Sum_probs=83.3

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+++||.++++.|.+.|   ++|++.+|+.    . +.+.+.+..            ...++..+.+|+
T Consensus       319 ~l~gkvalVTGas~GIG~a~A~~la~~G---a~Vv~~~~~~----~-~~~~~~i~~------------~g~~~~~~~~Dv  378 (604)
T 2et6_A          319 SLKDKVVLITGAGAGLGKEYAKWFAKYG---AKVVVNDFKD----A-TKTVDEIKA------------AGGEAWPDQHDV  378 (604)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEECSSC----C-HHHHHHHHH------------TTCEEEEECCCH
T ss_pred             ccCCCeEEEECcchHHHHHHHHHHHHCC---CEEEEEeCcc----H-HHHHHHHHh------------cCCeEEEEEcCh
Confidence            4678999999999999999999999999   6888877632    1 222221111            123566778888


Q ss_pred             -CCCCCCCCHHHHHHHhcCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCceeC
Q psy17489        113 -ESEHLGLSEDSEQLIKSKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFCEL  177 (177)
Q Consensus       113 -~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~v  177 (177)
                       .+..  ...+.+.+.+.++|++|||||+..       ..+.|+..+++|+.+++++.+.+..+   .+-.++|++
T Consensus       379 ~~~~~--~~~~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVni  452 (604)
T 2et6_A          379 AKDSE--AIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINI  452 (604)
T ss_dssp             HHHHH--HHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred             HHHHH--HHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEE
Confidence             4431  000122223458999999999753       14678899999999999998887542   133466653

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.16  E-value=2.6e-10  Score=105.13  Aligned_cols=114  Identities=15%  Similarity=0.179  Sum_probs=81.0

Q ss_pred             cCCCceEEEecCCcc-hHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         33 FYRDGQILVTGGTGF-MGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~-iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      .+++|+++||||+|+ ||.++++.|++.|   ++|++++++.. ....+...++...         ......++.++.+|
T Consensus       649 ~L~gKvaLVTGASgGgIG~aIAr~LA~~G---A~VVl~~~R~~-~~l~~~a~eL~~e---------l~~~G~~v~~v~~D  715 (1878)
T 2uv9_A          649 TFQGKHALMTGAGAGSIGAEVLQGLLSGG---AKVIVTTSRFS-RQVTEYYQGIYAR---------CGARGSQLVVVPFN  715 (1878)
T ss_dssp             CCTTCEEEEESCCTTSHHHHHHHHHHHTT---CEEEEEESSCC-HHHHHHHHHHHHH---------HCCTTCEEEEEECC
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCC---CEEEEEecCCh-HHHHHHHHHHHHH---------hhccCCeEEEEEcC
Confidence            367899999999999 9999999999999   58888864432 1111111111110         11123468899999


Q ss_pred             CCCCCCCCCHHHHHHHhc-----------CCcEEEEcCcccCc----------hHHHHHHHHHhHHHHHHHHHHH
Q psy17489        112 LESEHLGLSEDSEQLIKS-----------KVNIIFHCAASLRF----------DEALQKAIRANLYATKQMLNLA  165 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~-----------~~d~vi~~aa~~~~----------~~~~~~~~~~nv~~~~~ll~~~  165 (177)
                      +++.      +++..+++           ++|+||||||....          .+.|+..+++|+.++.++++.+
T Consensus       716 Vsd~------esV~alv~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~  784 (1878)
T 2uv9_A          716 QGSK------QDVEALVNYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQ  784 (1878)
T ss_dssp             TTCH------HHHHHHHHHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CCCH------HHHHHHHHHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence            9998      66666542           58999999997432          3667889999999999998774

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.16  E-value=2.9e-10  Score=104.95  Aligned_cols=115  Identities=17%  Similarity=0.217  Sum_probs=82.1

Q ss_pred             cCCCceEEEecCCcc-hHHHHHHHHHhhCCCcCeEEEEE-eCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489         33 FYRDGQILVTGGTGF-MGKLLIDKLLRSFPDIGAIYIMV-RDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS  110 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~-iG~~l~~~L~~~g~~~~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  110 (177)
                      .+++|+++||||+++ ||.++++.|++.|   ++|++++ |+..  ...+...++...         ......++.++.+
T Consensus       672 ~l~gKvaLVTGASsGgIG~aIA~~La~~G---A~Vvl~~~R~~~--~l~~~~~eL~~~---------~~~~g~~v~~v~~  737 (1887)
T 2uv8_A          672 TFKDKYVLITGAGKGSIGAEVLQGLLQGG---AKVVVTTSRFSK--QVTDYYQSIYAK---------YGAKGSTLIVVPF  737 (1887)
T ss_dssp             CCTTCEEEEESCCSSSHHHHHHHHHHHTT---CEEEEEESSCCH--HHHHHHHHHHHH---------HCCTTCEEEEEEC
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCC---CEEEEEecCCHH--HHHHHHHHHHHH---------hhcCCCeEEEEEe
Confidence            367899999999998 9999999999999   6888875 4331  111111111110         1111346889999


Q ss_pred             CCCCCCCCCCHHHHHHHhc-------------CCcEEEEcCcccCc----------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        111 NLESEHLGLSEDSEQLIKS-------------KVNIIFHCAASLRF----------DEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       111 D~~~~~~~~~~~~~~~~~~-------------~~d~vi~~aa~~~~----------~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      |+++.      +++..+++             ++|++|||||....          .+.|+..+++|+.++..+++.++.
T Consensus       738 DVsd~------~sV~alv~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~  811 (1887)
T 2uv8_A          738 NQGSK------QDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKS  811 (1887)
T ss_dssp             CTTCH------HHHHHHHHHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             cCCCH------HHHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99998      56665542             58999999997421          356778899999999999998843

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.14  E-value=3.1e-10  Score=89.10  Aligned_cols=127  Identities=9%  Similarity=0.073  Sum_probs=79.1

Q ss_pred             CCceEEEecCCc--chHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhh-hhhcccccCcccCCCeEEEeCC
Q psy17489         35 RDGQILVTGGTG--FMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSV-IFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        35 ~~~~vlVtG~~G--~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      ++|+++||||++  +||.++++.|++.|   ++|++.+|++..    ..+....... ...............+.++.+|
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G---~~Vv~~~~~~~~----~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D   73 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRN---VKIIFGIWPPVY----NIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFD   73 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTT---CEEEEEECHHHH----HHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECC
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCC---CEEEEEecCccc----cccccchHHHHHHHHHHHhhccccccccccccc
Confidence            368999999875  99999999999999   688877764310    0010000000 0000111111122347788999


Q ss_pred             CCCCCCC-CCHH-------------HHHH-------HhcCCcEEEEcCcccC---------chHHHHHHHHHhHHHHHHH
Q psy17489        112 LESEHLG-LSED-------------SEQL-------IKSKVNIIFHCAASLR---------FDEALQKAIRANLYATKQM  161 (177)
Q Consensus       112 ~~~~~~~-~~~~-------------~~~~-------~~~~~d~vi~~aa~~~---------~~~~~~~~~~~nv~~~~~l  161 (177)
                      +.+.... ...+             ++..       .+.++|++|||||...         ..+.|+..+++|+.++..+
T Consensus        74 v~~~~~~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l  153 (329)
T 3lt0_A           74 ASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISL  153 (329)
T ss_dssp             TTCSSGGGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHH
T ss_pred             ccccchhhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHH
Confidence            9887211 0001             2222       2347899999999631         2467888999999999999


Q ss_pred             HHHHHhc
Q psy17489        162 LNLAKEC  168 (177)
Q Consensus       162 l~~~~~~  168 (177)
                      .+.+...
T Consensus       154 ~~~~~p~  160 (329)
T 3lt0_A          154 CKYFVNI  160 (329)
T ss_dssp             HHHHGGG
T ss_pred             HHHHHHH
Confidence            9998764

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.12  E-value=6.3e-10  Score=85.96  Aligned_cols=135  Identities=15%  Similarity=0.074  Sum_probs=76.3

Q ss_pred             CCCceEEEecCC--cchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCccc-C-CCeEEEe
Q psy17489         34 YRDGQILVTGGT--GFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDF-R-SKIQVIP  109 (177)
Q Consensus        34 ~~~~~vlVtG~~--G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~v~~~~  109 (177)
                      +++|+++||||+  |+||.++++.|++.|   ++|++.+|++..    ...........++.+. +.... . .....+.
T Consensus         6 l~~k~~lVTGas~~~GIG~aia~~la~~G---~~V~~~~r~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~   77 (297)
T 1d7o_A            6 LRGKRAFIAGIADDNGYGWAVAKSLAAAG---AEILVGTWVPAL----NIFETSLRRGKFDQSR-VLPDGSLMEIKKVYP   77 (297)
T ss_dssp             CTTCEEEEECCSSSSSHHHHHHHHHHHTT---CEEEEEEEHHHH----HHHHHHHHTTTTTGGG-BCTTSSBCCEEEEEE
T ss_pred             cCCCEEEEECCCCCCChHHHHHHHHHHCC---CeEEEeeccccc----hhhhhhhhhhHhhhhh-hhccccccccccccc
Confidence            578999999999  999999999999999   689988874210    0000000000111110 00000 0 0123333


Q ss_pred             CCC--------CC------------C-CCCCCHHHHHHHhcCCcEEEEcCcccC---------chHHHHHHHHHhHHHHH
Q psy17489        110 SNL--------ES------------E-HLGLSEDSEQLIKSKVNIIFHCAASLR---------FDEALQKAIRANLYATK  159 (177)
Q Consensus       110 ~D~--------~~------------~-~~~~~~~~~~~~~~~~d~vi~~aa~~~---------~~~~~~~~~~~nv~~~~  159 (177)
                      +|+        .+            . .+....+.+.+.+.++|++|||||...         ..+.|+..+++|+.++.
T Consensus        78 ~~~~~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~  157 (297)
T 1d7o_A           78 LDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFV  157 (297)
T ss_dssp             ECTTCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHH
T ss_pred             cceeccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHH
Confidence            332        21            1 000000111122347999999998531         13668889999999999


Q ss_pred             HHHHHHHhc-CCCCCcee
Q psy17489        160 QMLNLAKEC-VNLKRFCE  176 (177)
Q Consensus       160 ~ll~~~~~~-~~~~~~v~  176 (177)
                      ++++++... ..-.++|+
T Consensus       158 ~l~~~~~~~m~~~g~iv~  175 (297)
T 1d7o_A          158 SLLSHFLPIMNPGGASIS  175 (297)
T ss_dssp             HHHHHHGGGEEEEEEEEE
T ss_pred             HHHHHHHHHhccCceEEE
Confidence            999999764 01135655

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.09  E-value=4.8e-10  Score=87.42  Aligned_cols=136  Identities=13%  Similarity=0.007  Sum_probs=76.5

Q ss_pred             CCCceEEEecC--CcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCccc-CCCeEEEeC
Q psy17489         34 YRDGQILVTGG--TGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDF-RSKIQVIPS  110 (177)
Q Consensus        34 ~~~~~vlVtG~--~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~  110 (177)
                      +++|+++||||  +|+||.++++.|++.|   ++|++++|++..    ++.........++.+.+..... ...+.++.+
T Consensus         7 l~gk~~lVTGa~~s~GIG~aia~~la~~G---~~Vv~~~r~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (315)
T 2o2s_A            7 LRGQTAFVAGVADSHGYGWAIAKHLASAG---ARVALGTWPPVL----GLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPL   79 (315)
T ss_dssp             CTTCEEEEECCSSSSSHHHHHHHHHHTTT---CEEEEEECHHHH----HHHHHHHHHTTTHHHHBCTTSCBCCCSCEEEC
T ss_pred             CCCCEEEEeCCCCCCChHHHHHHHHHHCC---CEEEEEeccccc----chhhhhhhhhhhhhhhhhhccccccccccccc
Confidence            67899999999  8999999999999999   689888874210    0000000000000000000000 001234444


Q ss_pred             CCC--CCC-CC----C-------CHHHHHHH-------hcCCcEEEEcCcccC---------chHHHHHHHHHhHHHHHH
Q psy17489        111 NLE--SEH-LG----L-------SEDSEQLI-------KSKVNIIFHCAASLR---------FDEALQKAIRANLYATKQ  160 (177)
Q Consensus       111 D~~--~~~-~~----~-------~~~~~~~~-------~~~~d~vi~~aa~~~---------~~~~~~~~~~~nv~~~~~  160 (177)
                      |+.  +.. +.    .       ..+++..+       +.++|++|||||...         ..+.|+..+++|+.++.+
T Consensus        80 d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~  159 (315)
T 2o2s_A           80 DAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVS  159 (315)
T ss_dssp             CTTCSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHH
T ss_pred             cccccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHH
Confidence            331  110 00    0       00122222       347999999998541         136688899999999999


Q ss_pred             HHHHHHhc-CCCCCcee
Q psy17489        161 MLNLAKEC-VNLKRFCE  176 (177)
Q Consensus       161 ll~~~~~~-~~~~~~v~  176 (177)
                      +++.+... ..-.+||+
T Consensus       160 l~~~~~~~m~~~g~Iv~  176 (315)
T 2o2s_A          160 LLQHFGPIMNEGGSAVT  176 (315)
T ss_dssp             HHHHHSTTEEEEEEEEE
T ss_pred             HHHHHHHHHhcCCEEEE
Confidence            99998653 01135654

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.08  E-value=2.3e-09  Score=85.91  Aligned_cols=112  Identities=11%  Similarity=0.005  Sum_probs=79.3

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHh-hCCCcCeEEEEEeCCCCCCh---------HHHHHHHHhhhhhhcccccCcccCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLR-SFPDIGAIYIMVRDKKGSSP---------EERVKNMLNSVIFDRLNKEVPDFRS  103 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~-~g~~~~~v~~~~r~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~  103 (177)
                      ..+|+++||||+++||.+++..|++ .|   ++|++.+|+......         .+.+.+....            ...
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~G---A~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~------------~G~  109 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCG---ADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQ------------KGL  109 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHC---CEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHH------------TTC
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcC---CEEEEEeCCchhhhhhcccccchhHHHHHHHHHh------------cCC
Confidence            4679999999999999999999999 99   689888886543210         1112211111            235


Q ss_pred             CeEEEeCCCCCCCCCCCHHHHHHHh-------cCCcEEEEcCccc----------------C------------------
Q psy17489        104 KIQVIPSNLESEHLGLSEDSEQLIK-------SKVNIIFHCAASL----------------R------------------  142 (177)
Q Consensus       104 ~v~~~~~D~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~----------------~------------------  142 (177)
                      ++..+.+|+++.      +.+..++       .++|++|||||..                .                  
T Consensus       110 ~a~~i~~Dvtd~------~~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~  183 (405)
T 3zu3_A          110 YAKSINGDAFSD------EIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIK  183 (405)
T ss_dssp             CEEEEESCTTSH------HHHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEE
T ss_pred             ceEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccc
Confidence            678899999998      5555543       3689999999863                0                  


Q ss_pred             -------chHHHHHHHHHhHHHHH-HHHHHHH
Q psy17489        143 -------FDEALQKAIRANLYATK-QMLNLAK  166 (177)
Q Consensus       143 -------~~~~~~~~~~~nv~~~~-~ll~~~~  166 (177)
                             ..+.|+..+++|..+.+ .+++.+.
T Consensus       184 ~~~i~~~t~ee~~~~v~Vn~~~~~~~~~~~~~  215 (405)
T 3zu3_A          184 ESVLQPATQSEIDSTVAVMGGEDWQMWIDALL  215 (405)
T ss_dssp             EEEECCCCHHHHHHHHHHHSSHHHHHHHHHHH
T ss_pred             cccCCCCCHHHHHHHHHhhchhHHHHHHHHHH
Confidence                   13568888899988876 5666544

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.06  E-value=2.2e-09  Score=71.28  Aligned_cols=75  Identities=13%  Similarity=0.119  Sum_probs=59.6

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +++++|+|+ |++|.++++.|.+.|.  .+|++.+|++      +++.....               ..+.++.+|+.+.
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~g~--~~v~~~~r~~------~~~~~~~~---------------~~~~~~~~d~~~~   60 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTSSN--YSVTVADHDL------AALAVLNR---------------MGVATKQVDAKDE   60 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCSS--EEEEEEESCH------HHHHHHHT---------------TTCEEEECCTTCH
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCC--ceEEEEeCCH------HHHHHHHh---------------CCCcEEEecCCCH
Confidence            578999999 9999999999999872  4788888864      23332211               4567888999987


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCcc
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAAS  140 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa~  140 (177)
                            +.+..+++++|+||++++.
T Consensus        61 ------~~~~~~~~~~d~vi~~~~~   79 (118)
T 3ic5_A           61 ------AGLAKALGGFDAVISAAPF   79 (118)
T ss_dssp             ------HHHHHHTTTCSEEEECSCG
T ss_pred             ------HHHHHHHcCCCEEEECCCc
Confidence                  7888888999999999964

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.06  E-value=1.5e-09  Score=91.79  Aligned_cols=123  Identities=14%  Similarity=0.137  Sum_probs=77.4

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC------CCChHHHHHHHHhhhhhhcccccCcccCCCeEE
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK------GSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQV  107 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  107 (177)
                      +++|+++||||+++||.++++.|++.|   ++|++.+|+..      .....+.+.+.+..            ...+.. 
T Consensus         6 l~gkvalVTGas~GIG~a~A~~la~~G---a~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~------------~g~~~~-   69 (604)
T 2et6_A            6 FKDKVVIITGAGGGLGKYYSLEFAKLG---AKVVVNDLGGALNGQGGNSKAADVVVDEIVK------------NGGVAV-   69 (604)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEECC-----------CHHHHHHHHHHH------------TTCEEE-
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcC---CEEEEEeCCccccccccchHHHHHHHHHHHh------------cCCeEE-
Confidence            578999999999999999999999999   68888877531      11111222221111            112222 


Q ss_pred             EeCCCCCCCCCCCHHHHH---HHhcCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCc
Q psy17489        108 IPSNLESEHLGLSEDSEQ---LIKSKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRF  174 (177)
Q Consensus       108 ~~~D~~~~~~~~~~~~~~---~~~~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~  174 (177)
                        .|+.+..  .....++   +.+.++|++|||||+..       ..++|+..+++|+.+++.+.+++..+   .+-.++
T Consensus        70 --~d~~d~~--~~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~I  145 (604)
T 2et6_A           70 --ADYNNVL--DGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRI  145 (604)
T ss_dssp             --EECCCTT--CHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred             --EEcCCHH--HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEE
Confidence              3554441  0011222   23458999999999743       24678899999999999998876432   133466


Q ss_pred             ee
Q psy17489        175 CE  176 (177)
Q Consensus       175 v~  176 (177)
                      |+
T Consensus       146 Vn  147 (604)
T 2et6_A          146 VN  147 (604)
T ss_dssp             EE
T ss_pred             EE
Confidence            65

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.05  E-value=9.8e-10  Score=85.79  Aligned_cols=138  Identities=11%  Similarity=0.047  Sum_probs=74.6

Q ss_pred             CCCceEEEecC--CcchHHHHHHHHHhhCCCcCeEEEEEeCC---------CCCChHHHHHHHHhhhhhhcccccCcccC
Q psy17489         34 YRDGQILVTGG--TGFMGKLLIDKLLRSFPDIGAIYIMVRDK---------KGSSPEERVKNMLNSVIFDRLNKEVPDFR  102 (177)
Q Consensus        34 ~~~~~vlVtG~--~G~iG~~l~~~L~~~g~~~~~v~~~~r~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      +++|+++||||  +++||.++++.|++.|   ++|++.+|++         ..... +....+ .....+.+.++.....
T Consensus         7 l~~k~~lVTGa~~s~GIG~aia~~la~~G---~~Vv~~~r~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~   81 (319)
T 2ptg_A            7 LRGKTAFVAGVADSNGYGWAICKLLRAAG---ARVLVGTWPPVYSIFKKGLESSRF-EQDSFY-AQEPSSKVAAEAAEKP   81 (319)
T ss_dssp             CTTCEEEEECCCCTTSHHHHHHHHHHHTT---CEEEEEECHHHHHHHHC-------------------------------
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHHCC---CEEEEEeccccccchhhhhhhhhh-hhhhhh-hcchhhhHHHHhhhcc
Confidence            57899999999  8999999999999999   6888887642         00000 000000 0000000111111000


Q ss_pred             C---CeEEEeCCC--CCCC-C----CC-------CHHHHHHH-------hcCCcEEEEcCcccC---------chHHHHH
Q psy17489        103 S---KIQVIPSNL--ESEH-L----GL-------SEDSEQLI-------KSKVNIIFHCAASLR---------FDEALQK  149 (177)
Q Consensus       103 ~---~v~~~~~D~--~~~~-~----~~-------~~~~~~~~-------~~~~d~vi~~aa~~~---------~~~~~~~  149 (177)
                      .   ...++.+|+  .+.. +    ..       ..+++..+       +.++|++|||||...         ..+.|+.
T Consensus        82 ~~~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~  161 (319)
T 2ptg_A           82 VDLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLA  161 (319)
T ss_dssp             ---CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHH
T ss_pred             ccccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHH
Confidence            0   124444443  2211 0    00       00122222       347999999998531         1366888


Q ss_pred             HHHHhHHHHHHHHHHHHhc-CCCCCcee
Q psy17489        150 AIRANLYATKQMLNLAKEC-VNLKRFCE  176 (177)
Q Consensus       150 ~~~~nv~~~~~ll~~~~~~-~~~~~~v~  176 (177)
                      .+++|+.++.++++.+... ..-.+||+
T Consensus       162 ~~~vN~~g~~~l~~~~~~~m~~~g~Iv~  189 (319)
T 2ptg_A          162 AVSSSSYSFVSLLQHFLPLMKEGGSALA  189 (319)
T ss_dssp             HHHHHTHHHHHHHHHHGGGEEEEEEEEE
T ss_pred             HHhHhhHHHHHHHHHHHHHHhcCceEEE
Confidence            9999999999999998764 01145655

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.04  E-value=5.3e-09  Score=84.41  Aligned_cols=85  Identities=13%  Similarity=0.062  Sum_probs=61.7

Q ss_pred             CCceEEEecCCcchHHHHHHHHHh-hCCCcCeEEEEEeCCCCCCh---------HHHHHHHHhhhhhhcccccCcccCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLR-SFPDIGAIYIMVRDKKGSSP---------EERVKNMLNSVIFDRLNKEVPDFRSK  104 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~-~g~~~~~v~~~~r~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (177)
                      .+|+++||||+++||.+++..|++ .|   ++|++++|+......         ...+.+....            ...+
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~G---A~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~------------~G~~  124 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFG---ADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKA------------AGLY  124 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHC---CEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHH------------TTCC
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCC---CEEEEEeCCchhhhhhhcccccchhHHHHHHHHh------------cCCc
Confidence            588999999999999999999999 99   689988887643221         1112111111            2356


Q ss_pred             eEEEeCCCCCCCCCCCHHHHHHH-------h-cCCcEEEEcCcc
Q psy17489        105 IQVIPSNLESEHLGLSEDSEQLI-------K-SKVNIIFHCAAS  140 (177)
Q Consensus       105 v~~~~~D~~~~~~~~~~~~~~~~-------~-~~~d~vi~~aa~  140 (177)
                      +..+.+|+++.      +.++.+       + .++|++|||||.
T Consensus       125 a~~i~~Dvtd~------~~v~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          125 SKSINGDAFSD------AARAQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             EEEEESCTTSH------HHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             EEEEEecCCCH------HHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence            78899999998      444443       4 578999999986

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.01  E-value=1.2e-09  Score=104.29  Aligned_cols=123  Identities=20%  Similarity=0.196  Sum_probs=83.4

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCCh-HHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSP-EERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      ..+++++||||+|+||..+++.|++.|.  ..|++.+|+...... .+.+.++..             ...++.++.+|+
T Consensus      1882 ~~~k~~lITGgs~GIG~aia~~la~~Ga--~~vvl~~R~~~~~~~~~~~~~~l~~-------------~g~~v~~~~~Dv 1946 (2512)
T 2vz8_A         1882 PPHKSYVITGGLGGFGLQLAQWLRLRGA--QKLVLTSRSGIRTGYQARQVREWRR-------------QGVQVLVSTSNA 1946 (2512)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTC--CEEEEECSSCCCSHHHHHHHHHHHH-------------TTCEEEEECCCS
T ss_pred             CCCCEEEEECCCCCHHHHHHHHHHHCCC--CEEEEEeCCCcchHHHHHHHHHHHh-------------CCCEEEEEecCC
Confidence            4689999999999999999999999993  358888887643321 122222211             234688899999


Q ss_pred             CCCCCCCCHHHHHHHh------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc-CCCCCceeC
Q psy17489        113 ESEHLGLSEDSEQLIK------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC-VNLKRFCEL  177 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~v  177 (177)
                      ++.      +++..++      .++|++|||||....       .+.|+..+++|+.++.++.+++... +...+||++
T Consensus      1947 sd~------~~v~~~~~~~~~~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~i 2019 (2512)
T 2vz8_A         1947 SSL------DGARSLITEATQLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIF 2019 (2512)
T ss_dssp             SSH------HHHHHHHHHHHHHSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEE
T ss_pred             CCH------HHHHHHHHHHHhcCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEe
Confidence            998      5565544      368999999997531       3456677899999999998887653 234566653

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.00  E-value=6.6e-09  Score=84.10  Aligned_cols=86  Identities=8%  Similarity=0.042  Sum_probs=63.3

Q ss_pred             CCCceEEEecCCcchHHH--HHHHHHhhCCCcCeEEEEEeCCCCCCh---------HHHHHHHHhhhhhhcccccCcccC
Q psy17489         34 YRDGQILVTGGTGFMGKL--LIDKLLRSFPDIGAIYIMVRDKKGSSP---------EERVKNMLNSVIFDRLNKEVPDFR  102 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~--l~~~L~~~g~~~~~v~~~~r~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      ..+|+++||||+++||.+  ++..|.+.|   ++|++++|+......         .+.+.+....            ..
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~G---a~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~------------~g  122 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPE---AHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKK------------KG  122 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSC---CEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHH------------TT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCC---CEEEEEecCcchhhhcccccccchHHHHHHHHHH------------cC
Confidence            678999999999999999  999999988   689999887543210         1233322221            23


Q ss_pred             CCeEEEeCCCCCCCCCCCHHHHHHHhc-------CCcEEEEcCcc
Q psy17489        103 SKIQVIPSNLESEHLGLSEDSEQLIKS-------KVNIIFHCAAS  140 (177)
Q Consensus       103 ~~v~~~~~D~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~  140 (177)
                      .++..+.+|+++.      ++++.+++       ++|++|||||.
T Consensus       123 ~~~~~~~~Dvtd~------~~v~~~v~~i~~~~G~IDiLVnNAG~  161 (418)
T 4eue_A          123 LVAKNFIEDAFSN------ETKDKVIKYIKDEFGKIDLFVYSLAA  161 (418)
T ss_dssp             CCEEEEESCTTCH------HHHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred             CcEEEEEeeCCCH------HHHHHHHHHHHHHcCCCCEEEECCcc
Confidence            5688999999998      55555443       68999999986

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=98.82  E-value=6.8e-09  Score=79.98  Aligned_cols=83  Identities=16%  Similarity=0.159  Sum_probs=61.7

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +++++++||||+|++|++++..|.+.|   .+|++.+|+..  .. +.+.+.+..            . .++.++.+|++
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G---~~V~i~~R~~~--~~-~~l~~~~~~------------~-~~~~~~~~D~~  177 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEG---AEVVLCGRKLD--KA-QAAADSVNK------------R-FKVNVTAAETA  177 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESSHH--HH-HHHHHHHHH------------H-HTCCCEEEECC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCc---CEEEEEECCHH--HH-HHHHHHHHh------------c-CCcEEEEecCC
Confidence            578999999999999999999999998   57888888642  11 112111110            0 13556778998


Q ss_pred             CCCCCCCHHHHHHHhcCCcEEEEcCccc
Q psy17489        114 SEHLGLSEDSEQLIKSKVNIIFHCAASL  141 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~d~vi~~aa~~  141 (177)
                      +.      +++..+++.+|+|||+++..
T Consensus       178 ~~------~~~~~~~~~~DvlVn~ag~g  199 (287)
T 1lu9_A          178 DD------ASRAEAVKGAHFVFTAGAIG  199 (287)
T ss_dssp             SH------HHHHHHTTTCSEEEECCCTT
T ss_pred             CH------HHHHHHHHhCCEEEECCCcc
Confidence            87      77888889999999999753

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.79  E-value=4.4e-08  Score=76.90  Aligned_cols=115  Identities=9%  Similarity=0.055  Sum_probs=76.9

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      +.++|+|+||+|++|.+++..|+..|. +..|+++++++.    .....++..     .     . ...++..    +..
T Consensus         7 ~~mKI~ViGAaG~VG~~la~~L~~~g~-~~ev~l~Di~~~----~~~~~dL~~-----~-----~-~~~~v~~----~~~   66 (326)
T 1smk_A            7 PGFKVAILGAAGGIGQPLAMLMKMNPL-VSVLHLYDVVNA----PGVTADISH-----M-----D-TGAVVRG----FLG   66 (326)
T ss_dssp             -CEEEEEETTTSTTHHHHHHHHHHCTT-EEEEEEEESSSH----HHHHHHHHT-----S-----C-SSCEEEE----EES
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCC-CCEEEEEeCCCc----HhHHHHhhc-----c-----c-ccceEEE----EeC
Confidence            347899999999999999999988763 457888887542    112222111     0     0 0011222    111


Q ss_pred             CCCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCcee
Q psy17489        115 EHLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKECVNLKRFCE  176 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~  176 (177)
                      .      .++..+++++|+|||+|+.... .++..+++..|+.++.++++.+.+. +.+.+|+
T Consensus        67 t------~d~~~al~gaDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~-~p~~~vi  122 (326)
T 1smk_A           67 Q------QQLEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKC-CPRAIVN  122 (326)
T ss_dssp             H------HHHHHHHTTCSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH-CTTSEEE
T ss_pred             C------CCHHHHcCCCCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEE
Confidence            1      4677788999999999996432 2233457899999999999999998 6666665

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=98.74  E-value=7e-08  Score=93.07  Aligned_cols=116  Identities=14%  Similarity=0.201  Sum_probs=80.8

Q ss_pred             cCCCceEEEecCCcc-hHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         33 FYRDGQILVTGGTGF-MGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~-iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      .++||+++||||+++ ||.++++.|++.|   ++|++.+|+.... ..+.+++....         ......++..+.+|
T Consensus      2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~G---A~Vvi~~r~~~~~-~~~~~~~l~~~---------l~~~G~~~~~v~~D 2199 (3089)
T 3zen_D         2133 XXXDEVAVVTGASKGSIAASVVGQLLDGG---ATVIATTSRLDDD-RLAFYKQLYRD---------HARFDATLWVVPAN 2199 (3089)
T ss_dssp             CCCCCEEEEESCCTTSHHHHHHHHHHHTT---CEEEEEESCCSHH-HHHHHHHHHHH---------HCCTTCEEEEEECC
T ss_pred             cCCCCEEEEeCCChhHHHHHHHHHHHHCC---CEEEEEeCChhhh-hhHHHHHHHHH---------HhhcCCeEEEEEec
Confidence            478999999999999 9999999999999   7999998875320 11112222111         11123467889999


Q ss_pred             CCCCCCCCCHHHHHHHh-----------cCCcEEEEcCcc----cC------------chHHHHHHHHHhHHHHHHHHHH
Q psy17489        112 LESEHLGLSEDSEQLIK-----------SKVNIIFHCAAS----LR------------FDEALQKAIRANLYATKQMLNL  164 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~-----------~~~d~vi~~aa~----~~------------~~~~~~~~~~~nv~~~~~ll~~  164 (177)
                      +++.      ++++.++           .++|++|||||.    ..            ....++..+++|+.++..+++.
T Consensus      2200 vtd~------~~v~~lv~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~ 2273 (3089)
T 3zen_D         2200 MASY------SDIDKLVEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISG 2273 (3089)
T ss_dssp             TTCH------HHHHHHHHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHH
T ss_pred             CCCH------HHHHHHHHHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9998      5665542           258999999997    11            1123344589999999888887


Q ss_pred             HHh
Q psy17489        165 AKE  167 (177)
Q Consensus       165 ~~~  167 (177)
                      +..
T Consensus      2274 ~~~ 2276 (3089)
T 3zen_D         2274 LSK 2276 (3089)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            654

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.74  E-value=1.7e-08  Score=79.37  Aligned_cols=122  Identities=9%  Similarity=0.051  Sum_probs=76.4

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCC----CcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFP----DIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~----~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      .++|+||||+|++|++++..|+..|.    ....|.++++..+  ...++......+ ..+        ....+   ..|
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~--~~~~~~~g~~~d-l~~--------~~~~~---~~~   70 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNE--KAQKALQGVMME-IDD--------CAFPL---LAG   70 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCH--HHHHHHHHHHHH-HHT--------TTCTT---EEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCc--cccccchhhHHH-Hhh--------hcccc---cCc
Confidence            47899999999999999999998763    1126888776510  000212111000 000        00011   123


Q ss_pred             CCCCCCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhcCCCC-CceeC
Q psy17489        112 LESEHLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKECVNLK-RFCEL  177 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~-~~v~v  177 (177)
                      +...      .+...+++++|+|||+||.... ..+..+++..|+..+.++++.+.++.+.+ +||++
T Consensus        71 i~~~------~~~~~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~  132 (329)
T 1b8p_A           71 MTAH------ADPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVV  132 (329)
T ss_dssp             EEEE------SSHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEEC
T ss_pred             EEEe------cCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEc
Confidence            3332      3467778999999999997542 33455688999999999999999872144 66653

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.71  E-value=8e-08  Score=78.57  Aligned_cols=108  Identities=17%  Similarity=0.204  Sum_probs=73.5

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      ++++++|+| +|++|++++..|.+.|   .+|++.+|+.      ++..+...             ....+..+.+|+.+
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G---~~V~v~~R~~------~~a~~la~-------------~~~~~~~~~~Dv~d   58 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSG---IKVTVACRTL------ESAKKLSA-------------GVQHSTPISLDVND   58 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTT---CEEEEEESSH------HHHHHTTT-------------TCTTEEEEECCTTC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCc---CEEEEEECCH------HHHHHHHH-------------hcCCceEEEeecCC
Confidence            468899998 8999999999999988   5788888864      22222111             11346788899988


Q ss_pred             CCCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHH--hH-------HHHHHHHHHHHhcCCCC
Q psy17489        115 EHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRA--NL-------YATKQMLNLAKECVNLK  172 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~--nv-------~~~~~ll~~~~~~~~~~  172 (177)
                      .      +++..+++++|+|||+++......-....++.  |+       ..+.++++.|++. +++
T Consensus        59 ~------~~l~~~l~~~DvVIn~a~~~~~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~a-Gv~  118 (450)
T 1ff9_A           59 D------AALDAEVAKHDLVISLIPYTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDA-GIT  118 (450)
T ss_dssp             H------HHHHHHHTTSSEEEECCC--CHHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHT-TCE
T ss_pred             H------HHHHHHHcCCcEEEECCccccchHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHC-CCe
Confidence            7      67888889999999999874332111222222  22       3567888888887 653

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=98.70  E-value=4.7e-08  Score=76.32  Aligned_cols=119  Identities=11%  Similarity=0.080  Sum_probs=73.9

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+|+||||+|++|++++..|+..|. ...+..+++.+.....+....++..  .. .+      ...++.+...+     
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~-~~el~L~Di~~~~~~~~~~~~dl~~--~~-~~------~~~~~~i~~~~-----   65 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPF-MKDLVLIGREHSINKLEGLREDIYD--AL-AG------TRSDANIYVES-----   65 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTT-CCEEEEEECGGGHHHHHHHHHHHHH--HH-TT------SCCCCEEEEEE-----
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCC-CCEEEEEcCCCchhhhHHHHHHHHH--hH-Hh------cCCCeEEEeCC-----
Confidence            4799999999999999999998764 3457777762111101111111110  00 00      00122222211     


Q ss_pred             CCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        117 LGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       117 ~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                           +.+..+++++|+|||+||.... .++...++..|+.++.++++.++++ + +++|++
T Consensus        66 -----d~l~~al~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~-~-~~~vlv  120 (313)
T 1hye_A           66 -----DENLRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEI-C-DTKIFV  120 (313)
T ss_dssp             -----TTCGGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-C-CCEEEE
T ss_pred             -----cchHHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-C-CeEEEE
Confidence                 1234457899999999997532 3344567899999999999999998 6 777653

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.57  E-value=4.7e-07  Score=70.30  Aligned_cols=114  Identities=10%  Similarity=0.007  Sum_probs=74.2

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEe--CCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR--DKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      ++|+||||+|++|++++..|+..|. ...+..+++  .+      ++++.... ...+...     ...++.+...|   
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~-~~el~L~Di~~~~------~~~~~~~~-dl~~~~~-----~~~~~~v~~~~---   64 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDI-ADEVVFVDIPDKE------DDTVGQAA-DTNHGIA-----YDSNTRVRQGG---   64 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-CSEEEEECCGGGH------HHHHHHHH-HHHHHHT-----TTCCCEEEECC---
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCC-CCEEEEEcCCCCh------hhHHHHHH-HHHHHHh-----hCCCcEEEeCC---
Confidence            5899999999999999999988764 346777776  32      12211110 0111100     01233333322   


Q ss_pred             CCCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        115 EHLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      .          .+++++|+|||+|+.... .++..+++..|+..+.++++.++++ +.+.+|++
T Consensus        65 ~----------~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~-~p~~~viv  117 (303)
T 1o6z_A           65 Y----------EDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEH-NDDYISLT  117 (303)
T ss_dssp             G----------GGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTT-CSCCEEEE
T ss_pred             H----------HHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEE
Confidence            1          236789999999996532 2344567899999999999999998 77777653

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.54  E-value=3.5e-07  Score=68.22  Aligned_cols=80  Identities=19%  Similarity=0.277  Sum_probs=53.7

Q ss_pred             CCceEEEecC----------------CcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccC
Q psy17489         35 RDGQILVTGG----------------TGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEV   98 (177)
Q Consensus        35 ~~~~vlVtG~----------------~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (177)
                      +||+++||||                +|++|.++++.+++.|   +.|+.+.|.....                      
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~G---a~V~lv~~~~~~~----------------------   56 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAG---YEVCLITTKRALK----------------------   56 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTT---CEEEEEECTTSCC----------------------
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCC---CEEEEEeCCcccc----------------------
Confidence            5899999999                8999999999999999   6899888864321                      


Q ss_pred             cccCCCeEEEeCCCCCCCCCCCHHHHHHHhcCCcEEEEcCcccCc
Q psy17489         99 PDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRF  143 (177)
Q Consensus        99 ~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~  143 (177)
                      +.....+..+..+-.+.    -.+.+...+.++|++||+||...+
T Consensus        57 ~~~~~~~~~~~v~s~~e----m~~~v~~~~~~~Dili~aAAvsD~   97 (232)
T 2gk4_A           57 PEPHPNLSIREITNTKD----LLIEMQERVQDYQVLIHSMAVSDY   97 (232)
T ss_dssp             CCCCTTEEEEECCSHHH----HHHHHHHHGGGCSEEEECSBCCSE
T ss_pred             ccCCCCeEEEEHhHHHH----HHHHHHHhcCCCCEEEEcCccccc
Confidence            00012444444332211    012333445689999999997654

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=98.46  E-value=1.7e-06  Score=69.00  Aligned_cols=88  Identities=16%  Similarity=0.009  Sum_probs=61.8

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHH-hhCCCcCeEEEEEeCCCCCCh---------HHHHHHHHhhhhhhcccccCcccC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLL-RSFPDIGAIYIMVRDKKGSSP---------EERVKNMLNSVIFDRLNKEVPDFR  102 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~-~~g~~~~~v~~~~r~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~  102 (177)
                      ...+|++|||||++++|.+.+..|. ..|   ..++++.+.......         ...+.+....            .+
T Consensus        47 ~~~pK~vLVtGaSsGiGlA~AialAf~~G---A~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~------------~G  111 (401)
T 4ggo_A           47 AKAPKNVLVLGCSNGYGLASRITAAFGYG---AATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKR------------EG  111 (401)
T ss_dssp             SCCCCEEEEESCSSHHHHHHHHHHHHHHC---CEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHH------------HT
T ss_pred             cCCCCEEEEECCCCcHHHHHHHHHHhhCC---CCEEEEecCCcccccccccccchhHHHHHHHHHH------------cC
Confidence            3567999999999999999999887 677   678887776432210         1112222111            34


Q ss_pred             CCeEEEeCCCCCCCCCCCHHHHHHHhc-------CCcEEEEcCccc
Q psy17489        103 SKIQVIPSNLESEHLGLSEDSEQLIKS-------KVNIIFHCAASL  141 (177)
Q Consensus       103 ~~v~~~~~D~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~  141 (177)
                      .+...+.+|+.++      +..+++++       ++|++||++|..
T Consensus       112 ~~a~~i~~Dv~d~------e~i~~vi~~i~~~~G~IDiLVhS~A~~  151 (401)
T 4ggo_A          112 LYSVTIDGDAFSD------EIKAQVIEEAKKKGIKFDLIVYSLASP  151 (401)
T ss_dssp             CCEEEEESCTTSH------HHHHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred             CCceeEeCCCCCH------HHHHHHHHHHHHhcCCCCEEEEecccc
Confidence            6788999999998      55555543       689999999964

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.43  E-value=1.5e-06  Score=59.27  Aligned_cols=76  Identities=14%  Similarity=0.191  Sum_probs=53.1

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +.+++++|+|+ |.+|..+++.|.+.|   .+|+++++++      ++.....               ......+.+|..
T Consensus         4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g---~~v~~~d~~~------~~~~~~~---------------~~~~~~~~~d~~   58 (144)
T 2hmt_A            4 IKNKQFAVIGL-GRFGGSIVKELHRMG---HEVLAVDINE------EKVNAYA---------------SYATHAVIANAT   58 (144)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTT---CCCEEEESCH------HHHHTTT---------------TTCSEEEECCTT
T ss_pred             CcCCcEEEECC-CHHHHHHHHHHHHCC---CEEEEEeCCH------HHHHHHH---------------HhCCEEEEeCCC
Confidence            34678999998 999999999999998   4677777753      2222110               012456778887


Q ss_pred             CCCCCCCHHHHHHH-hcCCcEEEEcCcc
Q psy17489        114 SEHLGLSEDSEQLI-KSKVNIIFHCAAS  140 (177)
Q Consensus       114 ~~~~~~~~~~~~~~-~~~~d~vi~~aa~  140 (177)
                      +.      +.+..+ ++++|++|++++.
T Consensus        59 ~~------~~l~~~~~~~~d~vi~~~~~   80 (144)
T 2hmt_A           59 EE------NELLSLGIRNFEYVIVAIGA   80 (144)
T ss_dssp             CH------HHHHTTTGGGCSEEEECCCS
T ss_pred             CH------HHHHhcCCCCCCEEEECCCC
Confidence            65      556554 6789999999874

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.42  E-value=9.8e-07  Score=65.60  Aligned_cols=78  Identities=17%  Similarity=0.176  Sum_probs=52.5

Q ss_pred             CCCceEEEecC----------------CcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhccccc
Q psy17489         34 YRDGQILVTGG----------------TGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKE   97 (177)
Q Consensus        34 ~~~~~vlVtG~----------------~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (177)
                      ++||+++||||                +|.+|.++++.|.+.|   +.|+.+++.....                     
T Consensus         6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~G---a~V~l~~~~~~l~---------------------   61 (226)
T 1u7z_A            6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRG---ANVTLVSGPVSLP---------------------   61 (226)
T ss_dssp             TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTT---CEEEEEECSCCCC---------------------
T ss_pred             CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCC---CEEEEEECCcccc---------------------
Confidence            67999999999                6999999999999999   6888877754211                     


Q ss_pred             CcccCCCeEEEeCCCCCCCCCCCHHHHHHHhcCCcEEEEcCcccC
Q psy17489         98 VPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLR  142 (177)
Q Consensus        98 ~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~  142 (177)
                         ....+.  ..|+.+..  .-.+.+...+.++|++||+||...
T Consensus        62 ---~~~g~~--~~dv~~~~--~~~~~v~~~~~~~Dili~~Aav~d   99 (226)
T 1u7z_A           62 ---TPPFVK--RVDVMTAL--EMEAAVNASVQQQNIFIGCAAVAD   99 (226)
T ss_dssp             ---CCTTEE--EEECCSHH--HHHHHHHHHGGGCSEEEECCBCCS
T ss_pred             ---cCCCCe--EEccCcHH--HHHHHHHHhcCCCCEEEECCcccC
Confidence               001222  34555541  000222233457999999999754

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.35  E-value=4.6e-06  Score=68.43  Aligned_cols=82  Identities=13%  Similarity=0.233  Sum_probs=58.6

Q ss_pred             cccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489         31 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS  110 (177)
Q Consensus        31 ~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  110 (177)
                      ...+++++|+|+|+ |++|+.++..|++.+ . .+|++.+|+.      ++.+.+...              .++..+.+
T Consensus        18 ~~~l~~k~VlIiGA-GgiG~aia~~L~~~~-g-~~V~v~~R~~------~ka~~la~~--------------~~~~~~~~   74 (467)
T 2axq_A           18 EGRHMGKNVLLLGS-GFVAQPVIDTLAAND-D-INVTVACRTL------ANAQALAKP--------------SGSKAISL   74 (467)
T ss_dssp             -----CEEEEEECC-STTHHHHHHHHHTST-T-EEEEEEESSH------HHHHHHHGG--------------GTCEEEEC
T ss_pred             ccCCCCCEEEEECC-hHHHHHHHHHHHhCC-C-CeEEEEECCH------HHHHHHHHh--------------cCCcEEEE
Confidence            34456789999997 999999999999873 1 4788888864      333332211              23566788


Q ss_pred             CCCCCCCCCCHHHHHHHhcCCcEEEEcCccc
Q psy17489        111 NLESEHLGLSEDSEQLIKSKVNIIFHCAASL  141 (177)
Q Consensus       111 D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~~  141 (177)
                      |+.+.      +++..+++++|+|||+++..
T Consensus        75 D~~d~------~~l~~~l~~~DvVIn~tp~~   99 (467)
T 2axq_A           75 DVTDD------SALDKVLADNDVVISLIPYT   99 (467)
T ss_dssp             CTTCH------HHHHHHHHTSSEEEECSCGG
T ss_pred             ecCCH------HHHHHHHcCCCEEEECCchh
Confidence            98886      67888888999999999875

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.33  E-value=2.6e-06  Score=58.28  Aligned_cols=74  Identities=12%  Similarity=0.160  Sum_probs=55.4

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      .+++++|+|+ |.+|.++++.|.+.|   ..|+++++++      +++.....               ..+.++.+|.++
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g---~~V~~id~~~------~~~~~~~~---------------~~~~~~~gd~~~   59 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAG---KKVLAVDKSK------EKIELLED---------------EGFDAVIADPTD   59 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTT---CCEEEEESCH------HHHHHHHH---------------TTCEEEECCTTC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCC---CeEEEEECCH------HHHHHHHH---------------CCCcEEECCCCC
Confidence            3578999997 889999999999998   5888888864      33333222               346788999998


Q ss_pred             CCCCCCHHHHHHH-hcCCcEEEEcCc
Q psy17489        115 EHLGLSEDSEQLI-KSKVNIIFHCAA  139 (177)
Q Consensus       115 ~~~~~~~~~~~~~-~~~~d~vi~~aa  139 (177)
                      +      +.+..+ ++++|++|.+.+
T Consensus        60 ~------~~l~~~~~~~~d~vi~~~~   79 (141)
T 3llv_A           60 E------SFYRSLDLEGVSAVLITGS   79 (141)
T ss_dssp             H------HHHHHSCCTTCSEEEECCS
T ss_pred             H------HHHHhCCcccCCEEEEecC
Confidence            7      556654 357899998876

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.31  E-value=1.9e-05  Score=53.41  Aligned_cols=75  Identities=16%  Similarity=0.129  Sum_probs=52.6

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +|+++|+|+ |++|..+++.|.+.|   ..|+++++++      +.+......              ..+.++.+|..+.
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g---~~v~~~d~~~------~~~~~~~~~--------------~~~~~~~~d~~~~   59 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKG---HDIVLIDIDK------DICKKASAE--------------IDALVINGDCTKI   59 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHHH--------------CSSEEEESCTTSH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCC---CeEEEEECCH------HHHHHHHHh--------------cCcEEEEcCCCCH
Confidence            578999986 999999999999998   5888888754      222222110              2455677888765


Q ss_pred             CCCCCHHHHHHH-hcCCcEEEEcCcc
Q psy17489        116 HLGLSEDSEQLI-KSKVNIIFHCAAS  140 (177)
Q Consensus       116 ~~~~~~~~~~~~-~~~~d~vi~~aa~  140 (177)
                            +.+... ++++|+||.+...
T Consensus        60 ------~~l~~~~~~~~d~vi~~~~~   79 (140)
T 1lss_A           60 ------KTLEDAGIEDADMYIAVTGK   79 (140)
T ss_dssp             ------HHHHHTTTTTCSEEEECCSC
T ss_pred             ------HHHHHcCcccCCEEEEeeCC
Confidence                  445443 5689999999753

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.30  E-value=2.5e-06  Score=68.77  Aligned_cols=83  Identities=14%  Similarity=0.264  Sum_probs=59.6

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCc-CeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDI-GAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      ++++|+|| |++|+.+++.|.+.| ++ ..|++.+|+.      ++.......     +..   ....++..+.+|+++.
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g-~~~~~V~v~~r~~------~~~~~la~~-----l~~---~~~~~~~~~~~D~~d~   65 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNR-EVFSHITLASRTL------SKCQEIAQS-----IKA---KGYGEIDITTVDADSI   65 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCT-TTCCEEEEEESCH------HHHHHHHHH-----HHH---TTCCCCEEEECCTTCH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCC-CCceEEEEEECCH------HHHHHHHHH-----hhh---hcCCceEEEEecCCCH
Confidence            68999998 899999999999886 22 4788888865      222222111     000   0013578899999987


Q ss_pred             CCCCCHHHHHHHhcC--CcEEEEcCccc
Q psy17489        116 HLGLSEDSEQLIKSK--VNIIFHCAASL  141 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~--~d~vi~~aa~~  141 (177)
                            +++..++++  +|+|||++++.
T Consensus        66 ------~~l~~~l~~~~~DvVin~ag~~   87 (405)
T 4ina_A           66 ------EELVALINEVKPQIVLNIALPY   87 (405)
T ss_dssp             ------HHHHHHHHHHCCSEEEECSCGG
T ss_pred             ------HHHHHHHHhhCCCEEEECCCcc
Confidence                  788888876  89999999864

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.17  E-value=8.4e-07  Score=69.77  Aligned_cols=113  Identities=12%  Similarity=0.108  Sum_probs=70.5

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCe-----EEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGA-----IYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS  110 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~-----v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  110 (177)
                      .++|.||||+|++|++++..|+..|. +..     ++++++.+....++-...++..     -       ..+-..    
T Consensus         3 ~~kV~V~GaaG~VG~~la~~L~~~~~-~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~-----~-------~~~~~~----   65 (333)
T 5mdh_A            3 PIRVLVTGAAGQIAYSLLYSIGNGSV-FGKDQPIILVLLDITPMMGVLDGVLMELQD-----C-------ALPLLK----   65 (333)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTT-TCTTCCEEEEEECCGGGHHHHHHHHHHHHH-----T-------CCTTEE----
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCCC-ccccCCCEEEEEeCCCccccchhhHhhhHh-----h-------hhcccC----
Confidence            46899999999999999999988763 234     7777774311111111111110     0       001111    


Q ss_pred             CCCCCCCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhcCCCC
Q psy17489        111 NLESEHLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKECVNLK  172 (177)
Q Consensus       111 D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~  172 (177)
                      ++.-.      ......++++|+||++||.... .++..+.++.|+..+..+++.+.++ +.+
T Consensus        66 ~~~~~------~~~~~~~~daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~-~~~  121 (333)
T 5mdh_A           66 DVIAT------DKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKY-AKK  121 (333)
T ss_dssp             EEEEE------SCHHHHTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHH-SCT
T ss_pred             CEEEc------CCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCC
Confidence            11111      1235567899999999986432 2344567899999999999999987 544

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.10  E-value=1.1e-05  Score=63.92  Aligned_cols=73  Identities=12%  Similarity=0.214  Sum_probs=56.2

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      .|+|+|.|| |++|+.+++.|.+.    ..|.+.+++.      +++...                ...+..+..|+.|.
T Consensus        16 ~mkilvlGa-G~vG~~~~~~L~~~----~~v~~~~~~~------~~~~~~----------------~~~~~~~~~d~~d~   68 (365)
T 3abi_A           16 HMKVLILGA-GNIGRAIAWDLKDE----FDVYIGDVNN------ENLEKV----------------KEFATPLKVDASNF   68 (365)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHTTT----SEEEEEESCH------HHHHHH----------------TTTSEEEECCTTCH
T ss_pred             ccEEEEECC-CHHHHHHHHHHhcC----CCeEEEEcCH------HHHHHH----------------hccCCcEEEecCCH
Confidence            457999998 99999999999765    4777777754      223221                13456788999987


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCccc
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAASL  141 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa~~  141 (177)
                            +.+..+++++|+||+++++.
T Consensus        69 ------~~l~~~~~~~DvVi~~~p~~   88 (365)
T 3abi_A           69 ------DKLVEVMKEFELVIGALPGF   88 (365)
T ss_dssp             ------HHHHHHHTTCSEEEECCCGG
T ss_pred             ------HHHHHHHhCCCEEEEecCCc
Confidence                  78999999999999998863

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.07  E-value=6.3e-05  Score=58.59  Aligned_cols=106  Identities=10%  Similarity=0.043  Sum_probs=70.0

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+|.|+||+|++|..++..|+..|. +..+.++++++    ......++..     .    .  ...++....+    . 
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~-~~ev~L~Di~~----~~~~a~dL~~-----~----~--~~~~l~~~~~----t-   59 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPL-VSRLTLYDIAH----TPGVAADLSH-----I----E--TRATVKGYLG----P-   59 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTT-CSEEEEEESSS----HHHHHHHHTT-----S----S--SSCEEEEEES----G-
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCC-CcEEEEEeCCc----cHHHHHHHhc-----c----C--cCceEEEecC----C-
Confidence            4799999999999999999998764 46899999865    1122222111     0    0  0011222211    0 


Q ss_pred             CCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        117 LGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       117 ~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                           .+++.+++++|+||++++.... .++..+++..|+..+..+.+.+.++
T Consensus        60 -----~d~~~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~  107 (314)
T 1mld_A           60 -----EQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQH  107 (314)
T ss_dssp             -----GGHHHHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred             -----CCHHHHhCCCCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence                 2467778999999999986532 2223346789999999999888776

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.04  E-value=4.7e-05  Score=52.75  Aligned_cols=78  Identities=12%  Similarity=0.158  Sum_probs=56.3

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      .++++|+|+ |.+|+.+++.|.+.|   ..|+++++++.  ...+.+....               ...+.++.+|.+++
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g---~~V~vid~~~~--~~~~~~~~~~---------------~~~~~~i~gd~~~~   61 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRG---QNVTVISNLPE--DDIKQLEQRL---------------GDNADVIPGDSNDS   61 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTT---CCEEEEECCCH--HHHHHHHHHH---------------CTTCEEEESCTTSH
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCC---CCEEEEECCCh--HHHHHHHHhh---------------cCCCeEEEcCCCCH
Confidence            467999985 999999999999998   57888888531  0001222211               13578899999987


Q ss_pred             CCCCCHHHHHHH-hcCCcEEEEcCcc
Q psy17489        116 HLGLSEDSEQLI-KSKVNIIFHCAAS  140 (177)
Q Consensus       116 ~~~~~~~~~~~~-~~~~d~vi~~aa~  140 (177)
                            +.+..+ ++++|.||.+.+.
T Consensus        62 ------~~l~~a~i~~ad~vi~~~~~   81 (153)
T 1id1_A           62 ------SVLKKAGIDRCRAILALSDN   81 (153)
T ss_dssp             ------HHHHHHTTTTCSEEEECSSC
T ss_pred             ------HHHHHcChhhCCEEEEecCC
Confidence                  667766 7889999988763

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.87  E-value=2.7e-05  Score=61.40  Aligned_cols=114  Identities=8%  Similarity=0.051  Sum_probs=71.4

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      ++.+++|.|+|++|++|+.++..++..|. +..|++++..+      ++++....+ ..+. .  .  ...++.+     
T Consensus         5 ~~~~~KV~ViGaaG~VG~~~a~~l~~~g~-~~evvLiDi~~------~k~~g~a~D-L~~~-~--~--~~~~i~~-----   66 (343)
T 3fi9_A            5 YLTEEKLTIVGAAGMIGSNMAQTAAMMRL-TPNLCLYDPFA------VGLEGVAEE-IRHC-G--F--EGLNLTF-----   66 (343)
T ss_dssp             CSCSSEEEEETTTSHHHHHHHHHHHHTTC-CSCEEEECSCH------HHHHHHHHH-HHHH-C--C--TTCCCEE-----
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhcCC-CCEEEEEeCCc------hhHHHHHHh-hhhC-c--C--CCCceEE-----
Confidence            45678999999999999999999999884 34788888743      222211100 0000 0  0  0012221     


Q ss_pred             CCCCCCCCHHHHHHHhcCCcEEEEcCcccC-chHHHHHHHHHhHHHHHHHHHHHHhcCCCCC
Q psy17489        113 ESEHLGLSEDSEQLIKSKVNIIFHCAASLR-FDEALQKAIRANLYATKQMLNLAKECVNLKR  173 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~-~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~  173 (177)
                      +        .+....++++|+||.+||... ..++-.+.++.|+.....+.+.+.++ ..+-
T Consensus        67 t--------~d~~~al~dADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~-~p~a  119 (343)
T 3fi9_A           67 T--------SDIKEALTDAKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSY-CPDC  119 (343)
T ss_dssp             E--------SCHHHHHTTEEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHH-CTTC
T ss_pred             c--------CCHHHHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-ccCc
Confidence            1        234566789999999998643 22344567899999999999998887 4433

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.86  E-value=2.7e-05  Score=54.18  Aligned_cols=80  Identities=13%  Similarity=0.151  Sum_probs=54.1

Q ss_pred             cccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489         31 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS  110 (177)
Q Consensus        31 ~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  110 (177)
                      +....+++++|+|+ |.+|..+++.|.+.|   ..|++++|++...      .         .+    . .......+.+
T Consensus        14 ~~~~~~~~v~IiG~-G~iG~~la~~L~~~g---~~V~vid~~~~~~------~---------~~----~-~~~g~~~~~~   69 (155)
T 2g1u_A           14 SKKQKSKYIVIFGC-GRLGSLIANLASSSG---HSVVVVDKNEYAF------H---------RL----N-SEFSGFTVVG   69 (155)
T ss_dssp             ---CCCCEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESCGGGG------G---------GS----C-TTCCSEEEES
T ss_pred             hcccCCCcEEEECC-CHHHHHHHHHHHhCC---CeEEEEECCHHHH------H---------HH----H-hcCCCcEEEe
Confidence            34456789999995 999999999999998   5899988865321      0         00    0 0123556777


Q ss_pred             CCCCCCCCCCHHHHHHH-hcCCcEEEEcCcc
Q psy17489        111 NLESEHLGLSEDSEQLI-KSKVNIIFHCAAS  140 (177)
Q Consensus       111 D~~~~~~~~~~~~~~~~-~~~~d~vi~~aa~  140 (177)
                      |..+.      +.+..+ ++++|+||.+.+.
T Consensus        70 d~~~~------~~l~~~~~~~ad~Vi~~~~~   94 (155)
T 2g1u_A           70 DAAEF------ETLKECGMEKADMVFAFTND   94 (155)
T ss_dssp             CTTSH------HHHHTTTGGGCSEEEECSSC
T ss_pred             cCCCH------HHHHHcCcccCCEEEEEeCC
Confidence            87665      445544 5689999998774

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=97.85  E-value=6.4e-05  Score=54.17  Aligned_cols=38  Identities=16%  Similarity=0.170  Sum_probs=33.2

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ...+++++|+||+|.+|..+++.+...|   .+|++++|++
T Consensus        36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G---~~V~~~~~~~   73 (198)
T 1pqw_A           36 LSPGERVLIHSATGGVGMAAVSIAKMIG---ARIYTTAGSD   73 (198)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHHT---CEEEEEESSH
T ss_pred             CCCCCEEEEeeCCChHHHHHHHHHHHcC---CEEEEEeCCH
Confidence            3467899999999999999999999998   5899888764

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.81  E-value=9.2e-05  Score=54.29  Aligned_cols=73  Identities=15%  Similarity=0.211  Sum_probs=54.7

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+++|+|+ |.+|+++++.|.+.|   ..|+++++++      +++..+...              .++.++.+|.++. 
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g---~~v~vid~~~------~~~~~l~~~--------------~~~~~i~gd~~~~-   55 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRK---YGVVIINKDR------ELCEEFAKK--------------LKATIIHGDGSHK-   55 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTT---CCEEEEESCH------HHHHHHHHH--------------SSSEEEESCTTSH-
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCC---CeEEEEECCH------HHHHHHHHH--------------cCCeEEEcCCCCH-
Confidence            57999995 999999999999998   5788888764      333332211              3567899999987 


Q ss_pred             CCCCHHHHHHH-hcCCcEEEEcCc
Q psy17489        117 LGLSEDSEQLI-KSKVNIIFHCAA  139 (177)
Q Consensus       117 ~~~~~~~~~~~-~~~~d~vi~~aa  139 (177)
                           +.+..+ ++++|.+|-+.+
T Consensus        56 -----~~l~~a~i~~ad~vi~~~~   74 (218)
T 3l4b_C           56 -----EILRDAEVSKNDVVVILTP   74 (218)
T ss_dssp             -----HHHHHHTCCTTCEEEECCS
T ss_pred             -----HHHHhcCcccCCEEEEecC
Confidence                 666665 578999997765

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.75  E-value=0.00012  Score=52.06  Aligned_cols=75  Identities=17%  Similarity=0.158  Sum_probs=54.4

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhh-CCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRS-FPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~-g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      ..+++++|+| .|.+|..+++.|.+. |   ..|+++++++      ++......               ..+..+.+|.
T Consensus        37 ~~~~~v~IiG-~G~~G~~~a~~L~~~~g---~~V~vid~~~------~~~~~~~~---------------~g~~~~~gd~   91 (183)
T 3c85_A           37 PGHAQVLILG-MGRIGTGAYDELRARYG---KISLGIEIRE------EAAQQHRS---------------EGRNVISGDA   91 (183)
T ss_dssp             CTTCSEEEEC-CSHHHHHHHHHHHHHHC---SCEEEEESCH------HHHHHHHH---------------TTCCEEECCT
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHhccC---CeEEEEECCH------HHHHHHHH---------------CCCCEEEcCC
Confidence            4567899998 699999999999998 8   5788888865      33332211               2456677888


Q ss_pred             CCCCCCCCHHHHHHH--hcCCcEEEEcCc
Q psy17489        113 ESEHLGLSEDSEQLI--KSKVNIIFHCAA  139 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~--~~~~d~vi~~aa  139 (177)
                      ++.      +.+..+  ++++|.||.+.+
T Consensus        92 ~~~------~~l~~~~~~~~ad~vi~~~~  114 (183)
T 3c85_A           92 TDP------DFWERILDTGHVKLVLLAMP  114 (183)
T ss_dssp             TCH------HHHHTBCSCCCCCEEEECCS
T ss_pred             CCH------HHHHhccCCCCCCEEEEeCC
Confidence            776      555555  567899998765

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.67  E-value=0.00038  Score=47.44  Aligned_cols=73  Identities=22%  Similarity=0.290  Sum_probs=54.7

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      ++++|.|+ |.+|..+++.|.+.|   ..|+++++++      +++.....               ..+..+.+|.+++ 
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g---~~v~vid~~~------~~~~~~~~---------------~g~~~i~gd~~~~-   61 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASD---IPLVVIETSR------TRVDELRE---------------RGVRAVLGNAANE-   61 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTT---CCEEEEESCH------HHHHHHHH---------------TTCEEEESCTTSH-
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCC---CCEEEEECCH------HHHHHHHH---------------cCCCEEECCCCCH-
Confidence            57899995 999999999999998   5888988865      33333222               3577899999987 


Q ss_pred             CCCCHHHHHHH-hcCCcEEEEcCcc
Q psy17489        117 LGLSEDSEQLI-KSKVNIIFHCAAS  140 (177)
Q Consensus       117 ~~~~~~~~~~~-~~~~d~vi~~aa~  140 (177)
                           +.+..+ ++++|++|-+.+.
T Consensus        62 -----~~l~~a~i~~ad~vi~~~~~   81 (140)
T 3fwz_A           62 -----EIMQLAHLECAKWLILTIPN   81 (140)
T ss_dssp             -----HHHHHTTGGGCSEEEECCSC
T ss_pred             -----HHHHhcCcccCCEEEEECCC
Confidence                 555554 4678999888663

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=97.66  E-value=0.00019  Score=55.86  Aligned_cols=86  Identities=8%  Similarity=0.006  Sum_probs=54.0

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++++++|+|+ |++|++++..|.+.|.  .+|++.+|++...   ++.+++.....     .    . ........++
T Consensus       151 ~l~gk~~lVlGa-GG~g~aia~~L~~~Ga--~~V~i~nR~~~~~---~~a~~la~~~~-----~----~-~~~~~~~~~~  214 (315)
T 3tnl_A          151 DIIGKKMTICGA-GGAATAICIQAALDGV--KEISIFNRKDDFY---ANAEKTVEKIN-----S----K-TDCKAQLFDI  214 (315)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTTC--SEEEEEECSSTTH---HHHHHHHHHHH-----H----H-SSCEEEEEET
T ss_pred             CccCCEEEEECC-ChHHHHHHHHHHHCCC--CEEEEEECCCchH---HHHHHHHHHhh-----h----h-cCCceEEecc
Confidence            357899999997 7999999999999983  4899999974321   22222211100     0    0 1122223344


Q ss_pred             CCCCCCCCHHHHHHHhcCCcEEEEcCcc
Q psy17489        113 ESEHLGLSEDSEQLIKSKVNIIFHCAAS  140 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~d~vi~~aa~  140 (177)
                      .+.      +.+...+.++|+||++-..
T Consensus       215 ~~~------~~l~~~l~~aDiIINaTp~  236 (315)
T 3tnl_A          215 EDH------EQLRKEIAESVIFTNATGV  236 (315)
T ss_dssp             TCH------HHHHHHHHTCSEEEECSST
T ss_pred             chH------HHHHhhhcCCCEEEECccC
Confidence            443      4566677889999988754

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=97.56  E-value=0.00018  Score=57.10  Aligned_cols=76  Identities=12%  Similarity=0.203  Sum_probs=50.9

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +.+++++|+|+ |.+|..+++.+...|   .+|++.+|++      ++++.....            ....   +..|..
T Consensus       164 l~~~~V~ViGa-G~iG~~~a~~l~~~G---a~V~~~d~~~------~~~~~~~~~------------~g~~---~~~~~~  218 (369)
T 2eez_A          164 VAPASVVILGG-GTVGTNAAKIALGMG---AQVTILDVNH------KRLQYLDDV------------FGGR---VITLTA  218 (369)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHHH------------TTTS---EEEEEC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCC---CEEEEEECCH------HHHHHHHHh------------cCce---EEEecC
Confidence            56799999998 999999999999998   5899998865      222221110            0011   223444


Q ss_pred             CCCCCCCHHHHHHHhcCCcEEEEcCcc
Q psy17489        114 SEHLGLSEDSEQLIKSKVNIIFHCAAS  140 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~d~vi~~aa~  140 (177)
                      +.      +.+.+.++++|+||++++.
T Consensus       219 ~~------~~l~~~~~~~DvVi~~~g~  239 (369)
T 2eez_A          219 TE------ANIKKSVQHADLLIGAVLV  239 (369)
T ss_dssp             CH------HHHHHHHHHCSEEEECCC-
T ss_pred             CH------HHHHHHHhCCCEEEECCCC
Confidence            43      5566667778888888774

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=97.45  E-value=0.00062  Score=52.97  Aligned_cols=38  Identities=11%  Similarity=0.040  Sum_probs=33.2

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ...+++++|+||+|.||..+++.+...|   .+|++.++++
T Consensus       143 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G---~~V~~~~~~~  180 (333)
T 1v3u_A          143 VKGGETVLVSAAAGAVGSVVGQIAKLKG---CKVVGAAGSD  180 (333)
T ss_dssp             CCSSCEEEEESTTBHHHHHHHHHHHHTT---CEEEEEESSH
T ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCC---CEEEEEeCCH
Confidence            3468899999999999999999999998   5899988764

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=97.42  E-value=0.00055  Score=53.65  Aligned_cols=37  Identities=11%  Similarity=0.078  Sum_probs=32.9

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..+++++|+||+|.+|..+++.+...|   .+|++++|++
T Consensus       168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G---a~V~~~~~~~  204 (347)
T 2hcy_A          168 MAGHWVAISGAAGGLGSLAVQYAKAMG---YRVLGIDGGE  204 (347)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECST
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCC---CcEEEEcCCH
Confidence            467899999999999999999999888   5899998865

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.36  E-value=0.00067  Score=52.65  Aligned_cols=37  Identities=16%  Similarity=0.032  Sum_probs=33.0

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..+++++|+||+|.+|..+++.+...|   .+|+++++++
T Consensus       139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G---~~V~~~~~~~  175 (327)
T 1qor_A          139 KPDEQFLFHAAAGGVGLIACQWAKALG---AKLIGTVGTA  175 (327)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHHT---CEEEEEESSH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcC---CEEEEEeCCH
Confidence            467899999999999999999999998   5899988864

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.35  E-value=0.00072  Score=52.61  Aligned_cols=37  Identities=14%  Similarity=0.156  Sum_probs=33.0

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..+++++|+||+|.+|..+++.+...|   .+|+++++++
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G---~~Vi~~~~~~  180 (333)
T 1wly_A          144 KPGDYVLIHAAAGGMGHIMVPWARHLG---ATVIGTVSTE  180 (333)
T ss_dssp             CTTCEEEETTTTSTTHHHHHHHHHHTT---CEEEEEESSH
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCC---CEEEEEeCCH
Confidence            467899999999999999999999998   5899998864

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.34  E-value=0.0038  Score=48.76  Aligned_cols=108  Identities=13%  Similarity=0.130  Sum_probs=68.4

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      ..++|.|+|+ |.+|..++..|+..|. +..++++++++      ++++....+ ..+.    .+....++.....|.  
T Consensus         4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~-~~~l~l~D~~~------~k~~g~a~D-L~~~----~~~~~~~v~i~~~~~--   68 (326)
T 3pqe_A            4 HVNKVALIGA-GFVGSSYAFALINQGI-TDELVVIDVNK------EKAMGDVMD-LNHG----KAFAPQPVKTSYGTY--   68 (326)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSCH------HHHHHHHHH-HHHT----GGGSSSCCEEEEECG--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCC-CceEEEEecch------HHHHHHHHH-HHhc----cccccCCeEEEeCcH--
Confidence            4578999996 9999999999999874 34888888753      222211100 0000    000012333332221  


Q ss_pred             CCCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        115 EHLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                                 ..++++|+||.+||.... .++-.+.++.|+.....+.+.+.++
T Consensus        69 -----------~a~~~aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~  112 (326)
T 3pqe_A           69 -----------EDCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMAS  112 (326)
T ss_dssp             -----------GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             -----------HHhCCCCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHh
Confidence                       246789999999986432 2344567899999999999988876

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.33  E-value=0.0015  Score=51.02  Aligned_cols=107  Identities=14%  Similarity=0.135  Sum_probs=59.0

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      .+++|.|+|+ |.+|+.++..|+..|. +..++++++++      ++++....+ ..+.     ......+.....|.  
T Consensus         8 ~~~kV~ViGa-G~vG~~~a~~l~~~~~-~~el~l~D~~~------~k~~g~a~D-L~~~-----~~~~~~~~i~~~~~--   71 (326)
T 3vku_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGI-AQEIGIVDIFK------DKTKGDAID-LEDA-----LPFTSPKKIYSAEY--   71 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSCH------HHHHHHHHH-HHTT-----GGGSCCCEEEECCG--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCC-CCeEEEEeCCh------HHHHHHHhh-Hhhh-----hhhcCCcEEEECcH--
Confidence            4678999996 9999999999999874 35888888753      222211110 0000     00112333333221  


Q ss_pred             CCCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        115 EHLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                                 ..++++|+||.+||.... .++-.+.++.|+.-...+.+.+.++
T Consensus        72 -----------~a~~~aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~  115 (326)
T 3vku_A           72 -----------SDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDS  115 (326)
T ss_dssp             -----------GGGTTCSEEEECCCCC----------------CHHHHHHHHHTT
T ss_pred             -----------HHhcCCCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhc
Confidence                       236789999999996432 3445567888999899998888876

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=97.32  E-value=0.00098  Score=52.41  Aligned_cols=37  Identities=16%  Similarity=0.018  Sum_probs=32.8

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..+++++|+||+|.+|..+++.+...|   .+|+++++++
T Consensus       169 ~~g~~vlV~GasggiG~~~~~~a~~~G---a~Vi~~~~~~  205 (351)
T 1yb5_A          169 KAGESVLVHGASGGVGLAACQIARAYG---LKILGTAGTE  205 (351)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESSH
T ss_pred             CCcCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCh
Confidence            457899999999999999999999998   5899998864

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.27  E-value=0.00095  Score=52.49  Aligned_cols=37  Identities=11%  Similarity=0.067  Sum_probs=32.9

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..|++++|+||+|.+|..+++.+...|   .+|+++++++
T Consensus       161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G---a~Vi~~~~~~  197 (354)
T 2j8z_A          161 QAGDYVLIHAGLSGVGTAAIQLTRMAG---AIPLVTAGSQ  197 (354)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESCH
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHcC---CEEEEEeCCH
Confidence            467899999999999999999999998   5899998864

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=97.25  E-value=0.012  Score=45.69  Aligned_cols=106  Identities=12%  Similarity=0.070  Sum_probs=68.1

Q ss_pred             ceEEEecCCcchHHHHHHHHHhh-CCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRS-FPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~-g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      |+|.|+||+|.+|..++..|... +. ...+++++..+ .  ..-...++..          . ....++..+..  .+ 
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~-~~el~L~Di~~-~--~~G~a~Dl~~----------~-~~~~~v~~~~~--~~-   62 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPS-GSELSLYDIAP-V--TPGVAVDLSH----------I-PTAVKIKGFSG--ED-   62 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCT-TEEEEEECSST-T--HHHHHHHHHT----------S-CSSEEEEEECS--SC-
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCC-CceEEEEecCC-C--chhHHHHhhC----------C-CCCceEEEecC--CC-
Confidence            57999999999999999999876 43 35788888765 1  2112222111          0 00011221211  11 


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCcccC-chHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAASLR-FDEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~-~~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                              ....++++|++|-.||... ..++-.+.++.|+.....+.+.+.++
T Consensus        63 --------~~~~~~~aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~  108 (312)
T 3hhp_A           63 --------ATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKT  108 (312)
T ss_dssp             --------CHHHHTTCSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             --------cHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence                    1345789999999998643 23455668899999999998888776

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=97.22  E-value=0.0009  Score=52.59  Aligned_cols=38  Identities=11%  Similarity=-0.016  Sum_probs=32.6

Q ss_pred             CCC--ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRD--GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~--~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..+  ++++|+||+|.+|..+++.+...|.  .+|+++++++
T Consensus       157 ~~g~~~~vlI~GasggiG~~~~~~a~~~Ga--~~Vi~~~~~~  196 (357)
T 2zb4_A          157 TAGSNKTMVVSGAAGACGSVAGQIGHFLGC--SRVVGICGTH  196 (357)
T ss_dssp             CTTSCCEEEESSTTBHHHHHHHHHHHHTTC--SEEEEEESCH
T ss_pred             CCCCccEEEEECCCcHHHHHHHHHHHHCCC--CeEEEEeCCH
Confidence            457  8999999999999999999998882  2899988864

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.15  E-value=0.00053  Score=49.79  Aligned_cols=34  Identities=29%  Similarity=0.302  Sum_probs=30.0

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      |+++|+||+|.+|.+++..|.+.|   .+|++.+|++
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g---~~V~~~~r~~   34 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLG---HEIVVGSRRE   34 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTT---CEEEEEESSH
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCC---CEEEEEeCCH
Confidence            478999999999999999999998   5888888864

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.14  E-value=0.0016  Score=50.59  Aligned_cols=38  Identities=8%  Similarity=0.037  Sum_probs=33.2

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ...|++++|+||+|.+|..+++.+...|   .+|+++++++
T Consensus       147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~G---a~Vi~~~~~~  184 (336)
T 4b7c_A          147 PKNGETVVISGAAGAVGSVAGQIARLKG---CRVVGIAGGA  184 (336)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESSH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCH
Confidence            3468899999999999999999999888   5899998865

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.14  E-value=0.0019  Score=50.56  Aligned_cols=37  Identities=16%  Similarity=0.121  Sum_probs=32.4

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhh-CCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRS-FPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~-g~~~~~v~~~~r~~   73 (177)
                      ..+++++|+|++|.+|..+++.+... |   .+|++.++++
T Consensus       169 ~~g~~vlV~Gagg~iG~~~~~~a~~~~G---a~Vi~~~~~~  206 (347)
T 1jvb_A          169 DPTKTLLVVGAGGGLGTMAVQIAKAVSG---ATIIGVDVRE  206 (347)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHHTC---CEEEEEESSH
T ss_pred             CCCCEEEEECCCccHHHHHHHHHHHcCC---CeEEEEcCCH
Confidence            46789999999999999999999988 8   5899988764

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.14  E-value=0.00061  Score=51.77  Aligned_cols=36  Identities=25%  Similarity=0.161  Sum_probs=31.7

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      +.+++++|+|+ |.+|+.++..|.+.|   .+|++.+|+.
T Consensus       117 l~~k~vlViGa-Gg~g~a~a~~L~~~G---~~V~v~~R~~  152 (271)
T 1nyt_A          117 RPGLRILLIGA-GGASRGVLLPLLSLD---CAVTITNRTV  152 (271)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTT---CEEEEECSSH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHcC---CEEEEEECCH
Confidence            56899999998 789999999999998   6888888864

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.14  E-value=0.0013  Score=51.10  Aligned_cols=37  Identities=14%  Similarity=0.104  Sum_probs=32.2

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      +++++++|+|+ |++|++++..|.+.|.  .+|++..|+.
T Consensus       146 l~gk~~lVlGA-GGaaraia~~L~~~G~--~~v~v~nRt~  182 (312)
T 3t4e_A          146 MRGKTMVLLGA-GGAATAIGAQAAIEGI--KEIKLFNRKD  182 (312)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEEECSS
T ss_pred             cCCCEEEEECc-CHHHHHHHHHHHHcCC--CEEEEEECCC
Confidence            57899999997 8899999999999983  5899999974

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.13  E-value=0.00069  Score=50.06  Aligned_cols=71  Identities=8%  Similarity=-0.013  Sum_probs=52.3

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      .++++|.|+ |.+|..+++.|.+.|   . |+++++++.      .+....                ..+.++.+|.++.
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g---~-v~vid~~~~------~~~~~~----------------~~~~~i~gd~~~~   61 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSE---V-FVLAEDENV------RKKVLR----------------SGANFVHGDPTRV   61 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSE---E-EEEESCGGG------HHHHHH----------------TTCEEEESCTTCH
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCC---e-EEEEECCHH------HHHHHh----------------cCCeEEEcCCCCH
Confidence            468999996 999999999999887   5 777777642      222210                2477899999887


Q ss_pred             CCCCCHHHHHHH-hcCCcEEEEcCc
Q psy17489        116 HLGLSEDSEQLI-KSKVNIIFHCAA  139 (177)
Q Consensus       116 ~~~~~~~~~~~~-~~~~d~vi~~aa  139 (177)
                            +.+..+ ++++|.+|.+.+
T Consensus        62 ------~~l~~a~i~~ad~vi~~~~   80 (234)
T 2aef_A           62 ------SDLEKANVRGARAVIVDLE   80 (234)
T ss_dssp             ------HHHHHTTCTTCSEEEECCS
T ss_pred             ------HHHHhcCcchhcEEEEcCC
Confidence                  666665 678999998765

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=97.12  E-value=0.0025  Score=49.66  Aligned_cols=37  Identities=14%  Similarity=0.050  Sum_probs=32.7

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..|++++|+||+|.+|..+++.+...|   .+|++.++++
T Consensus       154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G---~~V~~~~~~~  190 (345)
T 2j3h_A          154 KEGETVYVSAASGAVGQLVGQLAKMMG---CYVVGSAGSK  190 (345)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESSH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCH
Confidence            467899999999999999999999888   5899988864

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.07  E-value=0.0017  Score=50.85  Aligned_cols=38  Identities=18%  Similarity=0.180  Sum_probs=33.3

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~   74 (177)
                      ..|++++|+||+|.+|...++.+...|   .+|+++++++.
T Consensus       158 ~~g~~VlV~Gasg~iG~~~~~~a~~~G---a~Vi~~~~~~~  195 (342)
T 4eye_A          158 RAGETVLVLGAAGGIGTAAIQIAKGMG---AKVIAVVNRTA  195 (342)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESSGG
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcC---CEEEEEeCCHH
Confidence            468899999999999999999999888   58999988653

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=97.03  E-value=0.0064  Score=46.81  Aligned_cols=112  Identities=12%  Similarity=0.049  Sum_probs=70.7

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEe-CCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIP-SNLESE  115 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~D~~~~  115 (177)
                      |+|.|+|+ |.+|+.++..|..++ -+..+..++..+..  +.-...++..     -.    ........... .|..  
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~-~~~el~L~Di~~~~--~~G~a~DL~h-----~~----~~~~~~~~i~~~~d~~--   65 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNL-DVDEIALVDIAEDL--AVGEAMDLAH-----AA----AGIDKYPKIVGGADYS--   65 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHS-CCSEEEEECSSHHH--HHHHHHHHHH-----HH----GGGTCCCEEEEESCGG--
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCC-CCCEEEEEeCCCCc--chhhhhhhhc-----cc----ccCCCCCeEecCCCHH--
Confidence            57999995 999999999998886 35788888875411  1111111110     00    00001122222 2222  


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCcccC-chHHHHHHHHHhHHHHHHHHHHHHhcCCCCCce
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAASLR-FDEALQKAIRANLYATKQMLNLAKECVNLKRFC  175 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~-~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v  175 (177)
                                 .++++|+||-.||... ..++-.+.++.|..-...+.+.+.++ ..+-++
T Consensus        66 -----------~~~~aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~-~p~aiv  114 (294)
T 2x0j_A           66 -----------LLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKI  114 (294)
T ss_dssp             -----------GGTTCSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTT-STTCEE
T ss_pred             -----------HhCCCCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhc-CCceEE
Confidence                       3578999999999654 23566678999999999999998887 544444

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.00  E-value=0.0029  Score=49.20  Aligned_cols=37  Identities=14%  Similarity=0.114  Sum_probs=32.7

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..|++++|+||+|.+|...++.+...|   .+|+++++++
T Consensus       147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~G---a~Vi~~~~~~  183 (334)
T 3qwb_A          147 KKGDYVLLFAAAGGVGLILNQLLKMKG---AHTIAVASTD  183 (334)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTT---CEEEEEESSH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCH
Confidence            468899999999999999999998888   5899998864

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.00  E-value=0.0026  Score=49.26  Aligned_cols=37  Identities=16%  Similarity=0.017  Sum_probs=32.8

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..|++++|+||+|.+|...++.+...|   .+|++.++++
T Consensus       139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~G---a~Vi~~~~~~  175 (325)
T 3jyn_A          139 KPGEIILFHAAAGGVGSLACQWAKALG---AKLIGTVSSP  175 (325)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHT---CEEEEEESSH
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCC---CEEEEEeCCH
Confidence            458899999999999999999999998   5899998864

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=96.99  E-value=0.0019  Score=50.40  Aligned_cols=38  Identities=18%  Similarity=0.181  Sum_probs=33.5

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~   74 (177)
                      ..|++++|+||+|.+|...++.+...|   .+|+++++++.
T Consensus       143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~G---a~Vi~~~~~~~  180 (340)
T 3gms_A          143 QRNDVLLVNACGSAIGHLFAQLSQILN---FRLIAVTRNNK  180 (340)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHT---CEEEEEESSST
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHcC---CEEEEEeCCHH
Confidence            467899999999999999999998898   68999998764

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=96.96  E-value=0.0038  Score=47.76  Aligned_cols=38  Identities=13%  Similarity=0.102  Sum_probs=32.5

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .+++++++|+|+ |++|+.++..|.+.|.  .+|++.+|+.
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~--~~v~i~~R~~  161 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGV--QKLQVADLDT  161 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTC--SEEEEECSSH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCC--CEEEEEECCH
Confidence            357899999997 8999999999999983  5788888875

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=96.94  E-value=0.02  Score=44.42  Aligned_cols=107  Identities=13%  Similarity=0.061  Sum_probs=65.4

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+|.|+|+ |.+|..++..|+..|. +..++++++++..  ++-...++..-...         ...+......|  ++ 
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~-~~el~l~D~~~~k--~~g~a~DL~~~~~~---------~~~~~~v~~~~--~~-   64 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDV-AKEVVMVDIKDGM--PQGKALDMRESSPI---------HGFDTRVTGTN--DY-   64 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTC-SSEEEEECSSTTH--HHHHHHHHHHHHHH---------HTCCCEEEEES--SS-
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCchHH--HHHHHHHHhccccc---------cCCCcEEEECC--CH-
Confidence            57999996 9999999999999874 4589998887632  11111111110000         01122232111  11 


Q ss_pred             CCCCHHHHHHHhcCCcEEEEcCcccC-chHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        117 LGLSEDSEQLIKSKVNIIFHCAASLR-FDEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       117 ~~~~~~~~~~~~~~~d~vi~~aa~~~-~~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                               ..++++|+||-+||... ..++-.+.++.|+.-...+.+...++
T Consensus        65 ---------~a~~~aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~  108 (314)
T 3nep_X           65 ---------GPTEDSDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEG  108 (314)
T ss_dssp             ---------GGGTTCSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ---------HHhCCCCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHh
Confidence                     24678999999998643 22344567899999999999988876

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.92  E-value=0.0027  Score=51.17  Aligned_cols=73  Identities=14%  Similarity=0.221  Sum_probs=55.8

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      .++|+|.|. |-+|..+++.|.+.|   ..|+++++++      +++.....               ..+.++.+|.++.
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g---~~vvvId~d~------~~v~~~~~---------------~g~~vi~GDat~~   58 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSG---VKMVVLDHDP------DHIETLRK---------------FGMKVFYGDATRM   58 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTT---CCEEEEECCH------HHHHHHHH---------------TTCCCEESCTTCH
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCC---CCEEEEECCH------HHHHHHHh---------------CCCeEEEcCCCCH
Confidence            468999995 889999999999998   5888888875      33443322               3567899999997


Q ss_pred             CCCCCHHHHHHH-hcCCcEEEEcCc
Q psy17489        116 HLGLSEDSEQLI-KSKVNIIFHCAA  139 (177)
Q Consensus       116 ~~~~~~~~~~~~-~~~~d~vi~~aa  139 (177)
                            +.+..+ +++++.||-+..
T Consensus        59 ------~~L~~agi~~A~~viv~~~   77 (413)
T 3l9w_A           59 ------DLLESAGAAKAEVLINAID   77 (413)
T ss_dssp             ------HHHHHTTTTTCSEEEECCS
T ss_pred             ------HHHHhcCCCccCEEEECCC
Confidence                  666665 568899888765

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=96.91  E-value=0.0037  Score=48.78  Aligned_cols=37  Identities=8%  Similarity=-0.067  Sum_probs=32.6

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..+++++|+|++|.+|..+++.+...|   .+|+++++++
T Consensus       165 ~~g~~vlV~Gasg~iG~~~~~~a~~~G---~~Vi~~~~~~  201 (343)
T 2eih_A          165 RPGDDVLVMAAGSGVSVAAIQIAKLFG---ARVIATAGSE  201 (343)
T ss_dssp             CTTCEEEECSTTSTTHHHHHHHHHHTT---CEEEEEESSH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCH
Confidence            457899999999999999999999888   5899988864

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=96.87  E-value=0.004  Score=48.88  Aligned_cols=37  Identities=19%  Similarity=0.236  Sum_probs=32.9

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..|++++|+||+|.+|..+++.+...|   .+|++.++++
T Consensus       166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~G---a~Vi~~~~~~  202 (353)
T 4dup_A          166 TEGESVLIHGGTSGIGTTAIQLARAFG---AEVYATAGST  202 (353)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESSH
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHHHcC---CEEEEEeCCH
Confidence            467899999999999999999999998   5899998865

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=96.86  E-value=0.0026  Score=48.95  Aligned_cols=37  Identities=24%  Similarity=0.202  Sum_probs=31.7

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      +.+++++|+|+ |.+|+.++..|.+.|.  .+|++.+|+.
T Consensus       139 l~~~~vlVlGa-Gg~g~aia~~L~~~G~--~~V~v~nR~~  175 (297)
T 2egg_A          139 LDGKRILVIGA-GGGARGIYFSLLSTAA--ERIDMANRTV  175 (297)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTC--SEEEEECSSH
T ss_pred             CCCCEEEEECc-HHHHHHHHHHHHHCCC--CEEEEEeCCH
Confidence            56899999997 7799999999999883  4899888864

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=96.86  E-value=0.018  Score=44.86  Aligned_cols=109  Identities=16%  Similarity=0.161  Sum_probs=65.9

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      ++.++|.|+|+ |.+|..++..|+..|.  ..|++.++++..  ++....++.......       ....++.. ..|. 
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~--~~v~L~Di~~~~--~~g~~~dl~~~~~~~-------~~~~~v~~-t~d~-   70 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKEL--GDVVLFDIAEGT--PQGKGLDIAESSPVD-------GFDAKFTG-ANDY-   70 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTC--CEEEEECSSSSH--HHHHHHHHHHHHHHH-------TCCCCEEE-ESSG-
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCC--CeEEEEeCCchh--HHHHHHHHhchhhhc-------CCCCEEEE-eCCH-
Confidence            34679999998 9999999999999885  288888886632  111111111100000       00112221 1221 


Q ss_pred             CCCCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        114 SEHLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                                  ..++++|+||.++|.... .++-.+.+..|+.....+.+...++
T Consensus        71 ------------~a~~~aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~  114 (324)
T 3gvi_A           71 ------------AAIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKY  114 (324)
T ss_dssp             ------------GGGTTCSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHH
T ss_pred             ------------HHHCCCCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHH
Confidence                        356889999999986432 2334457788999888888888776

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=96.85  E-value=0.015  Score=45.06  Aligned_cols=106  Identities=11%  Similarity=0.139  Sum_probs=64.7

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      .++|.|+|+ |++|..++..|+..|. +..|++++.++.....  ...++..     .    . ....++.+...   + 
T Consensus         7 ~~KI~IiGa-G~vG~~~a~~l~~~~~-~~ev~L~Di~~~~~~g--~~~dl~~-----~----~-~~~~~~~i~~~---~-   68 (318)
T 1y6j_A            7 RSKVAIIGA-GFVGASAAFTMALRQT-ANELVLIDVFKEKAIG--EAMDINH-----G----L-PFMGQMSLYAG---D-   68 (318)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTC-SSEEEEECCC---CCH--HHHHHTT-----S----C-CCTTCEEEC-----C-
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCChHHHHH--HHHHHHH-----h----H-HhcCCeEEEEC---C-
Confidence            468999998 9999999999998874 4589999987533221  1111110     0    0 01112222211   1 


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                               ...++++|+||.+++.... .++..+....|+.....+.+.+.++
T Consensus        69 ---------~~a~~~aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~  113 (318)
T 1y6j_A           69 ---------YSDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKY  113 (318)
T ss_dssp             ---------GGGGTTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---------HHHhCCCCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHh
Confidence                     2246899999999986432 2334457788999888888888875

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=96.84  E-value=0.0021  Score=53.35  Aligned_cols=36  Identities=22%  Similarity=0.187  Sum_probs=27.8

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      +++++++|||| |++|.+++..|.+.|   .+|++.+|+.
T Consensus       362 l~~k~vlV~Ga-GGig~aia~~L~~~G---~~V~i~~R~~  397 (523)
T 2o7s_A          362 LASKTVVVIGA-GGAGKALAYGAKEKG---AKVVIANRTY  397 (523)
T ss_dssp             ----CEEEECC-SHHHHHHHHHHHHHC---C-CEEEESSH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCC---CEEEEEECCH
Confidence            56789999999 699999999999999   4788888864

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=96.83  E-value=0.019  Score=44.73  Aligned_cols=107  Identities=14%  Similarity=0.145  Sum_probs=66.5

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      +.++|.|+|+ |.+|..++..|+..+. +..+..+++++      ++++....+ ..+..     ....++.+...+   
T Consensus         8 ~~~KI~IiGa-G~vG~~la~~l~~~~~-~~el~L~Di~~------~~~~g~~~d-l~~~~-----~~~~~~~i~~~~---   70 (326)
T 2zqz_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGI-AQEIGIVDIFK------DKTKGDAID-LSNAL-----PFTSPKKIYSAE---   70 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSCH------HHHHHHHHH-HHTTG-----GGSCCCEEEECC---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCC-CCEEEEEeCCc------hHhHHHHHH-HHHHH-----HhcCCeEEEECC---
Confidence            3478999998 9999999999988864 46888888743      222221110 01100     011233333311   


Q ss_pred             CCCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        115 EHLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                                ...++++|+||..++.... .++-.+++..|+.....+.+.+.++
T Consensus        71 ----------~~a~~~aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~  115 (326)
T 2zqz_A           71 ----------YSDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDS  115 (326)
T ss_dssp             ----------GGGGGGCSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----------HHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence                      1236899999999986432 2334457788888888888888776

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=96.82  E-value=0.014  Score=45.27  Aligned_cols=106  Identities=12%  Similarity=0.121  Sum_probs=63.9

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      .++|.|+|+ |.+|..++..|+..+. +..+..+++++      ++++....+ ..+..     ....++.+...+    
T Consensus         5 ~~KI~IiGa-G~vG~~~a~~l~~~~~-~~el~L~Di~~------~~~~g~~~d-l~~~~-----~~~~~~~v~~~~----   66 (318)
T 1ez4_A            5 HQKVVLVGD-GAVGSSYAFAMAQQGI-AEEFVIVDVVK------DRTKGDALD-LEDAQ-----AFTAPKKIYSGE----   66 (318)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSH------HHHHHHHHH-HHGGG-----GGSCCCEEEECC----
T ss_pred             CCEEEEECC-CHHHHHHHHHHHcCCC-CCEEEEEeCCc------hHHHHHHHH-HHHHH-----HhcCCeEEEECC----
Confidence            368999998 9999999999998864 46888888743      222211110 00100     011233333211    


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                               ...++++|+||..++.... .++-.+++..|+.....+.+...++
T Consensus        67 ---------~~a~~~aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~  111 (318)
T 1ez4_A           67 ---------YSDCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDS  111 (318)
T ss_dssp             ---------GGGGTTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHT
T ss_pred             ---------HHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence                     1236899999999986432 2333456788888888888888776

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=96.81  E-value=0.025  Score=43.97  Aligned_cols=107  Identities=13%  Similarity=0.098  Sum_probs=67.1

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEE-eCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVI-PSNLE  113 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~D~~  113 (177)
                      ..++|.|+| .|.+|..++..|...|.  ..++++++++..  .+....++... ..        ......... ..|  
T Consensus         4 ~~~kI~iiG-aG~vG~~~a~~l~~~~~--~~v~l~Di~~~~--~~g~a~dL~~~-~~--------~~~~~~~v~~t~d--   67 (321)
T 3p7m_A            4 ARKKITLVG-AGNIGGTLAHLALIKQL--GDVVLFDIAQGM--PNGKALDLLQT-CP--------IEGVDFKVRGTND--   67 (321)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTC--CEEEEECSSSSH--HHHHHHHHHTT-HH--------HHTCCCCEEEESC--
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCC--ceEEEEeCChHH--HHHHHHHHHhh-hh--------hcCCCcEEEEcCC--
Confidence            457899999 59999999999999875  288888886532  11111111110 00        000112222 122  


Q ss_pred             CCCCCCCHHHHHHHhcCCcEEEEcCcccC-chHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        114 SEHLGLSEDSEQLIKSKVNIIFHCAASLR-FDEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~d~vi~~aa~~~-~~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                                 ...++++|+||..++... ..++-.+.+..|+.....+.+.+.++
T Consensus        68 -----------~~a~~~aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~  112 (321)
T 3p7m_A           68 -----------YKDLENSDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHN  112 (321)
T ss_dssp             -----------GGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----------HHHHCCCCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHH
Confidence                       125688999999998643 22344567788999999998888876

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.80  E-value=0.0034  Score=51.34  Aligned_cols=74  Identities=16%  Similarity=0.337  Sum_probs=55.7

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      +.|+|+|.| .|-+|+++++.|.+.|   +.|+++++++      ++++++...              -.+..+.||-++
T Consensus         2 ~~M~iiI~G-~G~vG~~la~~L~~~~---~~v~vId~d~------~~~~~~~~~--------------~~~~~i~Gd~~~   57 (461)
T 4g65_A            2 NAMKIIILG-AGQVGGTLAENLVGEN---NDITIVDKDG------DRLRELQDK--------------YDLRVVNGHASH   57 (461)
T ss_dssp             CCEEEEEEC-CSHHHHHHHHHTCSTT---EEEEEEESCH------HHHHHHHHH--------------SSCEEEESCTTC
T ss_pred             CcCEEEEEC-CCHHHHHHHHHHHHCC---CCEEEEECCH------HHHHHHHHh--------------cCcEEEEEcCCC
Confidence            468999999 5889999999999988   5888888765      444433221              357889999999


Q ss_pred             CCCCCCHHHHHHH-hcCCcEEEEcC
Q psy17489        115 EHLGLSEDSEQLI-KSKVNIIFHCA  138 (177)
Q Consensus       115 ~~~~~~~~~~~~~-~~~~d~vi~~a  138 (177)
                      +      +.++++ ++++|.+|-.-
T Consensus        58 ~------~~L~~Agi~~ad~~ia~t   76 (461)
T 4g65_A           58 P------DVLHEAGAQDADMLVAVT   76 (461)
T ss_dssp             H------HHHHHHTTTTCSEEEECC
T ss_pred             H------HHHHhcCCCcCCEEEEEc
Confidence            8      667665 46899988653

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.80  E-value=0.0018  Score=48.65  Aligned_cols=37  Identities=22%  Similarity=0.322  Sum_probs=31.4

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      +.+++|+|.| .|.+|+++++.|...|.  .++.+++++.
T Consensus        29 l~~~~VlVvG-~Gg~G~~va~~La~~Gv--~~i~lvD~d~   65 (249)
T 1jw9_B           29 LKDSRVLIVG-LGGLGCAASQYLASAGV--GNLTLLDFDT   65 (249)
T ss_dssp             HHHCEEEEEC-CSHHHHHHHHHHHHHTC--SEEEEECCCB
T ss_pred             HhCCeEEEEe-eCHHHHHHHHHHHHcCC--CeEEEEcCCC
Confidence            5678999999 57899999999999984  6888888764

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=96.75  E-value=0.015  Score=45.75  Aligned_cols=111  Identities=14%  Similarity=0.101  Sum_probs=66.9

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCC---C-cCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCC-eEEEe
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFP---D-IGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSK-IQVIP  109 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~---~-~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~  109 (177)
                      ..-+|.|+||+|.||++++..|.....   + ...+..++..+..    +.++....+ ..+ .      ..+. ...+.
T Consensus        23 ~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~----~~~~Gva~D-L~~-~------~~~~~~~~~~   90 (345)
T 4h7p_A           23 SAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPAL----KALAGVEAE-LED-C------AFPLLDKVVV   90 (345)
T ss_dssp             CCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGH----HHHHHHHHH-HHH-T------TCTTEEEEEE
T ss_pred             CCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCcc----ccchhhhhh-hhh-c------CccCCCcEEE
Confidence            345899999999999999998876421   1 1256666654321    111111100 000 0      0011 11111


Q ss_pred             CCCCCCCCCCCHHHHHHHhcCCcEEEEcCcccC-chHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        110 SNLESEHLGLSEDSEQLIKSKVNIIFHCAASLR-FDEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       110 ~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~-~~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                         ..        .....++++|+||-.||... ..++-.+.++.|..-...+.+...++
T Consensus        91 ---~~--------~~~~a~~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~  139 (345)
T 4h7p_A           91 ---TA--------DPRVAFDGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAV  139 (345)
T ss_dssp             ---ES--------CHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---cC--------ChHHHhCCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhh
Confidence               11        23456899999999999653 23556678999999999998888774

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=96.75  E-value=0.012  Score=45.23  Aligned_cols=105  Identities=11%  Similarity=0.028  Sum_probs=66.7

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCCh-HHHHHHHHhhhhhhcccccCcccCCCeEEE-eCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSP-EERVKNMLNSVIFDRLNKEVPDFRSKIQVI-PSNLES  114 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~D~~~  114 (177)
                      |+|.|+|+ |.+|..++..|...|. +..|...++++..... ...+.+...     .       ......+. ..|   
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~-~~~v~L~D~~~~~~~g~~~dl~~~~~-----~-------~~~~~~i~~t~d---   63 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLD-VDEIALVDIAEDLAVGEAMDLAHAAA-----G-------IDKYPKIVGGAD---   63 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSC-CSEEEEECSSHHHHHHHHHHHHHHHH-----T-------TTCCCEEEEESC---
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCC-CCeEEEEECChHHHHHHHHHHHhhhh-----h-------cCCCCEEEEeCC---
Confidence            57999998 9999999999999874 3488988886521100 001111100     0       00112222 122   


Q ss_pred             CCCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        115 EHLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                                ..+++++|+||.++|.... .++-.+.++.|+.....+.+.+.++
T Consensus        64 ----------~~a~~~aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~  108 (294)
T 1oju_A           64 ----------YSLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN  108 (294)
T ss_dssp             ----------GGGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ----------HHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence                      2346789999999986432 2345567899999999999888876

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=96.75  E-value=0.0057  Score=48.17  Aligned_cols=37  Identities=14%  Similarity=0.148  Sum_probs=32.5

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..|++++|+||+|.+|..+++.+...|   .+|++.++++
T Consensus       162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~G---a~Vi~~~~~~  198 (362)
T 2c0c_A          162 SEGKKVLVTAAAGGTGQFAMQLSKKAK---CHVIGTCSSD  198 (362)
T ss_dssp             CTTCEEEETTTTBTTHHHHHHHHHHTT---CEEEEEESSH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHhCC---CEEEEEECCH
Confidence            467899999999999999999998888   5899998864

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=96.73  E-value=0.015  Score=45.10  Aligned_cols=110  Identities=14%  Similarity=0.132  Sum_probs=67.1

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      +.++|.|+|+ |.+|..++..|+..|.  ..|++.++++.....+-...++...  .. +    .....++... .|   
T Consensus         7 ~~~kv~ViGa-G~vG~~ia~~l~~~g~--~~v~l~D~~~~~~~~~g~a~dl~~~--~~-~----~~~~~~i~~t-~d---   72 (315)
T 3tl2_A            7 KRKKVSVIGA-GFTGATTAFLLAQKEL--ADVVLVDIPQLENPTKGKALDMLEA--SP-V----QGFDANIIGT-SD---   72 (315)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTC--CEEEEECCGGGHHHHHHHHHHHHHH--HH-H----HTCCCCEEEE-SC---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCC--CeEEEEeccchHHHHHHhhhhHHHh--hh-h----ccCCCEEEEc-CC---
Confidence            4578999996 9999999999999884  4899988863111111111111110  00 0    0001122221 12   


Q ss_pred             CCCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        115 EHLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                      .          ..++++|+||-++|.... .++-.+.++.|+.....+.+.+.++
T Consensus        73 ~----------~a~~~aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~  117 (315)
T 3tl2_A           73 Y----------ADTADSDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKH  117 (315)
T ss_dssp             G----------GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             H----------HHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            1          246789999999986432 3345567899999999998888776

>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A

Probab=96.69  E-value=0.029  Score=43.27  Aligned_cols=103  Identities=10%  Similarity=0.126  Sum_probs=63.4

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      ..++|.|+|| |.+|..++..|+..|. +..|+..+.++...   ....++..      +      ..+++... .|.  
T Consensus        13 ~~~kV~ViGa-G~vG~~~a~~l~~~g~-~~ev~L~Di~~~~~---g~a~dl~~------~------~~~~i~~t-~d~--   72 (303)
T 2i6t_A           13 TVNKITVVGG-GELGIACTLAISAKGI-ADRLVLLDLSEGTK---GATMDLEI------F------NLPNVEIS-KDL--   72 (303)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECCC--------CHHHHHH------H------TCTTEEEE-SCG--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEcCCcchH---HHHHHHhh------h------cCCCeEEe-CCH--
Confidence            3478999995 9999999999999984 45899988875311   11111111      0      11244432 332  


Q ss_pred             CCCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        115 EHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                                 ..++++|+||-.++.....++-.++...|+.-...+.+.+.+.
T Consensus        73 -----------~~l~~aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~  115 (303)
T 2i6t_A           73 -----------SASAHSKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHY  115 (303)
T ss_dssp             -----------GGGTTCSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----------HHHCCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence                       2368999999999874222333456777888888887777765

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=96.67  E-value=0.002  Score=50.92  Aligned_cols=36  Identities=17%  Similarity=0.307  Sum_probs=31.7

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..+++++|+|+ |.+|..+++.+...|   .+|++.+|++
T Consensus       165 l~~~~VlViGa-GgvG~~aa~~a~~~G---a~V~v~dr~~  200 (361)
T 1pjc_A          165 VKPGKVVILGG-GVVGTEAAKMAVGLG---AQVQIFDINV  200 (361)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESCH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCC---CEEEEEeCCH
Confidence            45689999998 999999999999998   5899998875

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=96.66  E-value=0.018  Score=44.59  Aligned_cols=108  Identities=13%  Similarity=0.173  Sum_probs=66.8

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      ..++|.|+|+ |.+|..++..|+..|. +..+..++.++.  .++....++. + ....       ...++.+.. |  +
T Consensus         5 ~~~KI~IIGa-G~vG~~la~~l~~~~~-~~ei~L~Di~~~--~~~g~~~dl~-~-~~~~-------~~~~~~v~~-~--~   68 (317)
T 3d0o_A            5 KGNKVVLIGN-GAVGSSYAFSLVNQSI-VDELVIIDLDTE--KVRGDVMDLK-H-ATPY-------SPTTVRVKA-G--E   68 (317)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCS-CSEEEEECSCHH--HHHHHHHHHH-H-HGGG-------SSSCCEEEE-C--C
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCChh--HhhhhhhhHH-h-hhhh-------cCCCeEEEe-C--C
Confidence            4579999998 9999999999998874 457888877531  1111111111 1 0100       012333332 2  1


Q ss_pred             CCCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        115 EHLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                                ..+++++|+||..++.... .++....+..|+.....+.+...++
T Consensus        69 ----------~~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~  113 (317)
T 3d0o_A           69 ----------YSDCHDADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMAS  113 (317)
T ss_dssp             ----------GGGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ----------HHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence                      2236899999999986432 3334456788888888888888776

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=96.65  E-value=0.01  Score=46.70  Aligned_cols=34  Identities=21%  Similarity=0.230  Sum_probs=31.0

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      |++|+|+|+ |.+|..+++.+...|   .+|+++++++
T Consensus       181 g~~VlV~Ga-G~vG~~~~q~a~~~G---a~Vi~~~~~~  214 (366)
T 2cdc_A          181 CRKVLVVGT-GPIGVLFTLLFRTYG---LEVWMANRRE  214 (366)
T ss_dssp             TCEEEEESC-HHHHHHHHHHHHHHT---CEEEEEESSC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCC---CEEEEEeCCc
Confidence            899999999 999999999999898   5899998875

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=96.63  E-value=0.0013  Score=44.92  Aligned_cols=34  Identities=15%  Similarity=0.231  Sum_probs=29.3

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      +++++|.|+ |.+|..+++.|.+.|   .+|++.+|+.
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g---~~v~v~~r~~   54 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQ---YKVTVAGRNI   54 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTT---CEEEEEESCH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCC---CEEEEEcCCH
Confidence            889999995 999999999999887   3588888864

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=96.62  E-value=0.023  Score=43.96  Aligned_cols=105  Identities=12%  Similarity=0.066  Sum_probs=66.6

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      ++|.|+|+ |.+|..++..|+..+. +..+..+++++      ++++....+ ..+..     ....++.+...|   . 
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~-~~el~L~Di~~------~k~~g~a~d-l~~~~-----~~~~~~~v~~~~---~-   62 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGV-AREVVLVDLDR------KLAQAHAED-ILHAT-----PFAHPVWVWAGS---Y-   62 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSH------HHHHHHHHH-HHTTG-----GGSCCCEEEECC---G-
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCCh------hHHHHHHHH-HHHhH-----hhcCCeEEEECC---H-
Confidence            57999998 9999999999988864 56899888753      222221110 11100     001233333321   2 


Q ss_pred             CCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        117 LGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       117 ~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                               ..++++|+||..++.... .++-.++...|+.....+.+.+.++
T Consensus        63 ---------~a~~~aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~  106 (310)
T 2xxj_A           63 ---------GDLEGARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEA  106 (310)
T ss_dssp             ---------GGGTTEEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---------HHhCCCCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHH
Confidence                     236899999999986432 2334456788888888888888776

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=96.61  E-value=0.032  Score=43.07  Aligned_cols=112  Identities=15%  Similarity=0.179  Sum_probs=64.5

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      ++|.|+|+ |.+|..++..|+..|.  ..|+++++++.  .++....++..  .....     ....++... .|.    
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~--~~v~L~Di~~~--~~~g~~~dl~~--~~~~~-----~~~~~i~~t-~d~----   65 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKEL--GDIVLLDIVEG--VPQGKALDLYE--ASPIE-----GFDVRVTGT-NNY----   65 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC--SEEEEECSSSS--HHHHHHHHHHT--THHHH-----TCCCCEEEE-SCG----
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCC--CeEEEEeCCcc--HHHHHHHhHHH--hHhhc-----CCCeEEEEC-CCH----
Confidence            58999998 9999999999998874  25888887642  12111111111  00000     001122221 222    


Q ss_pred             CCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCce
Q psy17489        117 LGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKECVNLKRFC  175 (177)
Q Consensus       117 ~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v  175 (177)
                               ..++++|+||.+++.... .++..+....|+.....+.+.+.+. ....+|
T Consensus        66 ---------~a~~~aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~v  115 (309)
T 1ur5_A           66 ---------ADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPL-SPNAVI  115 (309)
T ss_dssp             ---------GGGTTCSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGG-CTTCEE
T ss_pred             ---------HHHCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEE
Confidence                     246889999999986432 1222345678888888888888876 444443

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=96.53  E-value=0.0051  Score=47.08  Aligned_cols=38  Identities=11%  Similarity=0.091  Sum_probs=33.1

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~   74 (177)
                      ..|++++|+||+|.+|..+++.+...|   .+|+++++++.
T Consensus       124 ~~g~~vlV~Ga~G~vG~~~~~~a~~~G---a~Vi~~~~~~~  161 (302)
T 1iz0_A          124 RPGEKVLVQAAAGALGTAAVQVARAMG---LRVLAAASRPE  161 (302)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTT---CEEEEEESSGG
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHH
Confidence            467899999999999999999998888   58999998653

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=96.52  E-value=0.0097  Score=46.51  Aligned_cols=36  Identities=19%  Similarity=0.202  Sum_probs=31.6

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~   74 (177)
                      +++++|+||+|.+|...++.+...|   .+|++.++++.
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~G---a~Vi~~~~~~~  200 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEG---FRPIVTVRRDE  200 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHT---CEEEEEESCGG
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHH
Confidence            3799999999999999999999998   58999988653

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=96.50  E-value=0.019  Score=42.29  Aligned_cols=42  Identities=21%  Similarity=0.194  Sum_probs=34.2

Q ss_pred             cccccccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         27 EQKVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        27 ~~~~~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      +.++.-.+++++++|.| +|-+|...++.|++.|   +.|++++.+
T Consensus        22 ~~Pifl~L~gk~VLVVG-gG~va~~ka~~Ll~~G---A~VtVvap~   63 (223)
T 3dfz_A           22 MYTVMLDLKGRSVLVVG-GGTIATRRIKGFLQEG---AAITVVAPT   63 (223)
T ss_dssp             CCEEEECCTTCCEEEEC-CSHHHHHHHHHHGGGC---CCEEEECSS
T ss_pred             ccccEEEcCCCEEEEEC-CCHHHHHHHHHHHHCC---CEEEEECCC
Confidence            34555568899999999 4789999999999999   678887764

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.49  E-value=0.0076  Score=46.06  Aligned_cols=38  Identities=11%  Similarity=0.207  Sum_probs=33.0

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .++|++++|.|+++.+|+.++..|+..|   .+|+++.++.
T Consensus       157 ~l~Gk~vvVvGrs~iVG~p~A~lL~~~g---AtVtv~h~~t  194 (285)
T 3p2o_A          157 DLEGKDAVIIGASNIVGRPMATMLLNAG---ATVSVCHIKT  194 (285)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTT---CEEEEECTTC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCC---CeEEEEeCCc
Confidence            4689999999999999999999999998   6788776543

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=96.46  E-value=0.023  Score=44.44  Aligned_cols=108  Identities=11%  Similarity=0.141  Sum_probs=66.9

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEE-eCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVI-PSNL  112 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~D~  112 (177)
                      ...++|.|+|+ |.+|..++..|+..|. +..+++++++.      ++.+....+ ..+.     .........+ ..|.
T Consensus        17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~-~~el~L~Di~~------~~~~g~a~D-L~~~-----~~~~~~~~i~~~~d~   82 (331)
T 4aj2_A           17 VPQNKITVVGV-GAVGMACAISILMKDL-ADELALVDVIE------DKLKGEMMD-LQHG-----SLFLKTPKIVSSKDY   82 (331)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSCH------HHHHHHHHH-HHHT-----GGGCSCCEEEECSSG
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCC-CceEEEEeCCh------HHHHHHHHh-hhhh-----hhccCCCeEEEcCCH
Confidence            35679999997 9999999999998873 35788888753      222211110 0000     0000111122 2221


Q ss_pred             CCCCCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        113 ESEHLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                                  + .++++|+||.+||.... .++-.+.++.|+.-...+.+.+.++
T Consensus        83 ------------~-~~~~aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~  126 (331)
T 4aj2_A           83 ------------S-VTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKY  126 (331)
T ss_dssp             ------------G-GGTTEEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred             ------------H-HhCCCCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence                        1 36889999999986432 2334457889999988888888776

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=96.42  E-value=0.034  Score=43.39  Aligned_cols=108  Identities=9%  Similarity=0.066  Sum_probs=63.2

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      .++|.|+|| |.+|..++..|...|+  ..|.+.++++.  .++....++..  ....+    . ...++...       
T Consensus         9 ~~kI~VIGa-G~vG~~lA~~la~~g~--~~V~L~D~~~~--~~~~~~~~l~~--~~~~~----~-~~~~i~~t-------   69 (331)
T 1pzg_A            9 RKKVAMIGS-GMIGGTMGYLCALREL--ADVVLYDVVKG--MPEGKALDLSH--VTSVV----D-TNVSVRAE-------   69 (331)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTC--CEEEEECSSSS--HHHHHHHHHHH--HHHHT----T-CCCCEEEE-------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC--CeEEEEECChh--HHHHHHHHHHh--hhhcc----C-CCCEEEEe-------
Confidence            368999998 9999999999999984  26888888752  12111111111  11110    0 01122221       


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCcccCc-hH-----HHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAASLRF-DE-----ALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~-----~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                            .+++..++++|+||-.++.... ..     +-......|+.....+.+.+.+.
T Consensus        70 ------~d~~ea~~~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~  122 (331)
T 1pzg_A           70 ------YSYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKY  122 (331)
T ss_dssp             ------CSHHHHHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred             ------CCHHHHhCCCCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence                  1245567899999999975321 11     12234566777777777766665

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=96.42  E-value=0.011  Score=47.03  Aligned_cols=36  Identities=11%  Similarity=0.065  Sum_probs=32.0

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      +.+++++|+|+ |.+|..+++.+...|   .+|++.+|+.
T Consensus       166 l~g~~V~ViG~-G~iG~~~a~~a~~~G---a~V~~~d~~~  201 (377)
T 2vhw_A          166 VEPADVVVIGA-GTAGYNAARIANGMG---ATVTVLDINI  201 (377)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESCH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCC---CEEEEEeCCH
Confidence            56899999998 999999999999998   5899998864

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=96.39  E-value=0.02  Score=44.40  Aligned_cols=38  Identities=21%  Similarity=0.267  Sum_probs=31.4

Q ss_pred             cCCCce-EEEecCC------------------cchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         33 FYRDGQ-ILVTGGT------------------GFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        33 ~~~~~~-vlVtG~~------------------G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .+.|++ |+||+|.                  |..|.++++.++..|   +.|+.+.+..
T Consensus        33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~G---a~V~lv~g~~   89 (313)
T 1p9o_A           33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAG---YGVLFLYRAR   89 (313)
T ss_dssp             HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTT---CEEEEEEETT
T ss_pred             hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCC---CEEEEEecCC
Confidence            367888 9999765                  669999999999999   6888888754

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=96.38  E-value=0.0085  Score=41.58  Aligned_cols=73  Identities=14%  Similarity=0.204  Sum_probs=45.3

Q ss_pred             CcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCC----hHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCCCCC
Q psy17489         45 TGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSS----PEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLGLS  120 (177)
Q Consensus        45 ~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~  120 (177)
                      +|.++..+++.|.+.|   .+|++..|++....    ..+.+..                .+.+...+++|++++.    
T Consensus        25 s~~p~~a~a~~La~~G---a~vvi~~r~~~e~~~~~~~~~~~~~----------------~G~~~~~i~~Dv~~~~----   81 (157)
T 3gxh_A           25 SGLPNEQQFSLLKQAG---VDVVINLMPDSSKDAHPDEGKLVTQ----------------AGMDYVYIPVDWQNPK----   81 (157)
T ss_dssp             EBCCCHHHHHHHHHTT---CCEEEECSCTTSTTSCTTHHHHHHH----------------TTCEEEECCCCTTSCC----
T ss_pred             cCCCCHHHHHHHHHcC---CCEEEECCCcccccccccHHHHHHH----------------cCCeEEEecCCCCCCC----
Confidence            3568899999999999   56666666543221    1122211                1245667788998872    


Q ss_pred             HHHHHHHh-------cCCcEEEEcCccc
Q psy17489        121 EDSEQLIK-------SKVNIIFHCAASL  141 (177)
Q Consensus       121 ~~~~~~~~-------~~~d~vi~~aa~~  141 (177)
                      .+++..++       ++ |++|||||..
T Consensus        82 ~~~v~~~~~~i~~~~G~-dVLVnnAgg~  108 (157)
T 3gxh_A           82 VEDVEAFFAAMDQHKGK-DVLVHCLANY  108 (157)
T ss_dssp             HHHHHHHHHHHHHTTTS-CEEEECSBSH
T ss_pred             HHHHHHHHHHHHhcCCC-CEEEECCCCC
Confidence            13444332       35 9999999964

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=96.37  E-value=0.0053  Score=46.86  Aligned_cols=35  Identities=20%  Similarity=0.218  Sum_probs=30.0

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      +++++++|+|++ .+|.+++..|.+.|    +|++.+|+.
T Consensus       126 l~~k~vlV~GaG-giG~aia~~L~~~G----~V~v~~r~~  160 (287)
T 1nvt_A          126 VKDKNIVIYGAG-GAARAVAFELAKDN----NIIIANRTV  160 (287)
T ss_dssp             CCSCEEEEECCS-HHHHHHHHHHTSSS----EEEEECSSH
T ss_pred             cCCCEEEEECch-HHHHHHHHHHHHCC----CEEEEECCH
Confidence            578999999986 99999999999887    677777764

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=96.31  E-value=0.0098  Score=45.70  Aligned_cols=39  Identities=23%  Similarity=0.314  Sum_probs=32.4

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..++..+|+|.| .|++|+.+++.|...|.  .++.+++.+.
T Consensus        32 ~kL~~~~VlVvG-aGGlGs~va~~La~aGV--G~i~lvD~D~   70 (292)
T 3h8v_A           32 EKIRTFAVAIVG-VGGVGSVTAEMLTRCGI--GKLLLFDYDK   70 (292)
T ss_dssp             CGGGGCEEEEEC-CSHHHHHHHHHHHHHTC--SEEEEECCCB
T ss_pred             HHHhCCeEEEEC-cCHHHHHHHHHHHHcCC--CEEEEECCCc
Confidence            346778999999 67899999999999984  7888888754

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=96.30  E-value=0.015  Score=45.18  Aligned_cols=36  Identities=8%  Similarity=-0.038  Sum_probs=30.8

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..|++++|+|+ |.+|..+++.+...|   .+|+++++++
T Consensus       163 ~~g~~VlV~Ga-G~vG~~~~~~a~~~G---a~Vi~~~~~~  198 (339)
T 1rjw_A          163 KPGEWVAIYGI-GGLGHVAVQYAKAMG---LNVVAVDIGD  198 (339)
T ss_dssp             CTTCEEEEECC-STTHHHHHHHHHHTT---CEEEEECSCH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcC---CEEEEEeCCH
Confidence            45789999999 779999999998888   5899988764

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.29  E-value=0.006  Score=45.76  Aligned_cols=37  Identities=24%  Similarity=0.209  Sum_probs=30.6

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      .+++.+|+|.|+ |.+|+++++.|...|.  .++.+++++
T Consensus        25 ~l~~~~VlvvG~-GglG~~va~~La~~Gv--g~i~lvD~d   61 (251)
T 1zud_1           25 KLLDSQVLIIGL-GGLGTPAALYLAGAGV--GTLVLADDD   61 (251)
T ss_dssp             HHHTCEEEEECC-STTHHHHHHHHHHTTC--SEEEEECCC
T ss_pred             HHhcCcEEEEcc-CHHHHHHHHHHHHcCC--CeEEEEeCC
Confidence            356789999996 6699999999999984  688888664

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=96.27  E-value=0.0061  Score=47.44  Aligned_cols=71  Identities=10%  Similarity=0.021  Sum_probs=52.7

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      .++++|.|+ |.+|+.+++.|.+.|   . |+++++++      ++++ ...               ..+.++.+|.+++
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g---~-v~vid~~~------~~~~-~~~---------------~~~~~i~gd~~~~  167 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSE---V-FVLAEDEN------VRKK-VLR---------------SGANFVHGDPTRV  167 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSC---E-EEEESCGG------GHHH-HHH---------------TTCEEEESCTTSH
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCC---c-EEEEeCCh------hhhh-HHh---------------CCcEEEEeCCCCH
Confidence            458999995 999999999999987   5 77777655      2222 111               4678999999987


Q ss_pred             CCCCCHHHHHHH-hcCCcEEEEcCc
Q psy17489        116 HLGLSEDSEQLI-KSKVNIIFHCAA  139 (177)
Q Consensus       116 ~~~~~~~~~~~~-~~~~d~vi~~aa  139 (177)
                            +.+.++ ++++|.++-+.+
T Consensus       168 ------~~L~~a~i~~a~~vi~~~~  186 (336)
T 1lnq_A          168 ------SDLEKANVRGARAVIVDLE  186 (336)
T ss_dssp             ------HHHHHTCSTTEEEEEECCS
T ss_pred             ------HHHHhcChhhccEEEEcCC
Confidence                  677766 678888887754

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=96.27  E-value=0.044  Score=42.42  Aligned_cols=107  Identities=10%  Similarity=0.139  Sum_probs=63.6

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      .++|.|+|+ |.+|..++..|...|. +..|+.+++++.  ..+....++     .+..    +....++.+...|    
T Consensus         6 ~~kI~IIGa-G~vG~sla~~l~~~~~-~~ev~l~Di~~~--~~~~~~~dl-----~~~~----~~~~~~~~i~~~~----   68 (316)
T 1ldn_A            6 GARVVVIGA-GFVGASYVFALMNQGI-ADEIVLIDANES--KAIGDAMDF-----NHGK----VFAPKPVDIWHGD----   68 (316)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSHH--HHHHHHHHH-----HHHT----TSSSSCCEEEECC----
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCC-CCEEEEEeCCcc--hHHHHHhhH-----HHHh----hhcCCCeEEEcCc----
Confidence            468999998 9999999999988864 458999888642  111111111     1110    0001133333211    


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCcccCch-HHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAASLRFD-EALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~~~-~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                               ...++++|+||-+++..... .+..+.+..|+.-...+.+.+.++
T Consensus        69 ---------~~al~~aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~  113 (316)
T 1ldn_A           69 ---------YDDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMAS  113 (316)
T ss_dssp             ---------GGGTTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHH
T ss_pred             ---------HHHhCCCCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHH
Confidence                     12367899999999864321 122334567777777777777665

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=96.24  E-value=0.01  Score=46.74  Aligned_cols=35  Identities=11%  Similarity=0.098  Sum_probs=30.6

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .|.+++|+|+ |.+|..+++.+...|   .+|+++++++
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~G---a~Vi~~~~~~  221 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFG---SKVTVISTSP  221 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESCG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCC---CEEEEEeCCH
Confidence            6889999996 999999999998888   5899888765

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=96.22  E-value=0.013  Score=46.89  Aligned_cols=37  Identities=30%  Similarity=0.402  Sum_probs=32.3

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      +.|++++|.|+ |.+|..+++.|...|.  .+|++.+|+.
T Consensus       165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~--~~V~v~~r~~  201 (404)
T 1gpj_A          165 LHDKTVLVVGA-GEMGKTVAKSLVDRGV--RAVLVANRTY  201 (404)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCC--SEEEEECSSH
T ss_pred             ccCCEEEEECh-HHHHHHHHHHHHHCCC--CEEEEEeCCH
Confidence            57899999997 9999999999999983  4899988864

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=96.22  E-value=0.014  Score=44.64  Aligned_cols=37  Identities=19%  Similarity=0.187  Sum_probs=32.1

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      .++|++++|.|+++.+|+.++..|+..|   .+|+++.++
T Consensus       158 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~g---AtVtv~hs~  194 (285)
T 3l07_A          158 KTEGAYAVVVGASNVVGKPVSQLLLNAK---ATVTTCHRF  194 (285)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTT---CEEEEECTT
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCC---CeEEEEeCC
Confidence            4689999999999999999999999998   677776554

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.21  E-value=0.015  Score=44.70  Aligned_cols=37  Identities=14%  Similarity=0.217  Sum_probs=32.8

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      .++|++++|.|+++-+|+.++..|++.|   .+|+++.|+
T Consensus       162 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~g---AtVtv~~~~  198 (300)
T 4a26_A          162 EMAGKRAVVLGRSNIVGAPVAALLMKEN---ATVTIVHSG  198 (300)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTT---CEEEEECTT
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCC---CeEEEEeCC
Confidence            4689999999999999999999999998   688877664

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=96.15  E-value=0.014  Score=44.56  Aligned_cols=37  Identities=16%  Similarity=0.136  Sum_probs=32.3

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      .++|++++|.|+++.+|+.++..|+..|   .+|+++.++
T Consensus       158 ~l~Gk~vvVvGrs~iVG~plA~lL~~~g---AtVtv~hs~  194 (286)
T 4a5o_A          158 DLYGMDAVVVGASNIVGRPMALELLLGG---CTVTVTHRF  194 (286)
T ss_dssp             CCTTCEEEEECTTSTTHHHHHHHHHHTT---CEEEEECTT
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCC---CeEEEEeCC
Confidence            4689999999999999999999999998   678777554

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=96.14  E-value=0.017  Score=45.04  Aligned_cols=36  Identities=19%  Similarity=0.321  Sum_probs=30.7

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..|.+++|+||+|.+|...++.+...|   .+|+++ +++
T Consensus       149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~G---a~Vi~~-~~~  184 (343)
T 3gaz_A          149 QDGQTVLIQGGGGGVGHVAIQIALARG---ARVFAT-ARG  184 (343)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEE-ECH
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCC---CEEEEE-eCH
Confidence            467899999999999999999998888   588887 543

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=96.14  E-value=0.012  Score=44.82  Aligned_cols=36  Identities=14%  Similarity=0.238  Sum_probs=32.3

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      ++|++++|.|+++-+|+.++..|+..|   ++|+...++
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~g---AtVtv~~~~  183 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRN---YTVSVCHSK  183 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTT---CEEEEECTT
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCC---CeEEEEeCC
Confidence            789999999999999999999999998   688877654

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=96.14  E-value=0.018  Score=46.62  Aligned_cols=38  Identities=18%  Similarity=0.241  Sum_probs=32.2

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ...|++|+|+||+|.+|...++.+...|   .+|++.++++
T Consensus       218 ~~~g~~VlV~GasG~iG~~a~qla~~~G---a~vi~~~~~~  255 (447)
T 4a0s_A          218 MKQGDIVLIWGASGGLGSYAIQFVKNGG---GIPVAVVSSA  255 (447)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHcC---CEEEEEeCCH
Confidence            3467899999999999999999998888   6888887654

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=96.11  E-value=0.04  Score=42.37  Aligned_cols=105  Identities=14%  Similarity=0.173  Sum_probs=58.8

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+|.|+|+ |.+|..++..|...|+ ...|++.++++      +++.....+ ..+.    .+ ..........|   . 
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~-~~eV~L~D~~~------~~~~~~~~~-l~~~----~~-~~~~~~i~~~~---~-   62 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGS-CSELVLVDRDE------DRAQAEAED-IAHA----AP-VSHGTRVWHGG---H-   62 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSH------HHHHHHHHH-HTTS----CC-TTSCCEEEEEC---G-
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCCH------HHHHHHHHh-hhhh----hh-hcCCeEEEECC---H-
Confidence            47999998 9999999999999884 34899988864      222211110 0000    00 01122222111   1 


Q ss_pred             CCCCHHHHHHHhcCCcEEEEcCcccC-chHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        117 LGLSEDSEQLIKSKVNIIFHCAASLR-FDEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       117 ~~~~~~~~~~~~~~~d~vi~~aa~~~-~~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                               ..++++|+||.+++... ..++..+.+..|+.....+.+.+.+.
T Consensus        63 ---------~a~~~aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~  106 (304)
T 2v6b_A           63 ---------SELADAQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRA  106 (304)
T ss_dssp             ---------GGGTTCSEEEECC------------CHHHHHHHHHHHHHHHHHH
T ss_pred             ---------HHhCCCCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHh
Confidence                     24678999999997532 22333456677888888887777765

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=96.08  E-value=0.062  Score=42.68  Aligned_cols=113  Identities=12%  Similarity=0.071  Sum_probs=66.7

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCe---EEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccC-CCeEEEe
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGA---IYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFR-SKIQVIP  109 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~---v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~  109 (177)
                      ....+|.|+||+|.+|++++..|+..+. +..   +.....+.+  ..++.++....+         ..+.. +-..-+ 
T Consensus        30 ~~~~KV~ViGAaG~VG~~la~~l~~~~l-~~e~~~l~L~d~d~~--~~~~~~~G~amD---------L~h~~~p~~~~v-   96 (375)
T 7mdh_A           30 KKLVNIAVSGAAGMISNHLLFKLASGEV-FGQDQPIALKLLGSE--RSFQALEGVAME---------LEDSLYPLLREV-   96 (375)
T ss_dssp             CCCEEEEEETTTSHHHHHHHHHHHHTTT-TCTTCCEEEEEECCG--GGHHHHHHHHHH---------HHTTTCTTEEEE-
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHcCCc-CCCCceeEEEecCcc--chhhhhHHHHHh---------HHhhhhhhcCCc-
Confidence            3567899999999999999999988753 222   555444321  111222211110         00010 111111 


Q ss_pred             CCCCCCCCCCCHHHHHHHhcCCcEEEEcCcccC-chHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        110 SNLESEHLGLSEDSEQLIKSKVNIIFHCAASLR-FDEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       110 ~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~-~~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                       .+..        .....++++|+||-.||... ..++-.+.++.|+.-...+.+...++
T Consensus        97 -~i~~--------~~y~~~~daDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~  147 (375)
T 7mdh_A           97 -SIGI--------DPYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAV  147 (375)
T ss_dssp             -EEES--------CHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -EEec--------CCHHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence             1111        12445789999999998643 23455678899999999998888763

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=96.05  E-value=0.0027  Score=48.44  Aligned_cols=37  Identities=22%  Similarity=0.298  Sum_probs=31.6

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      +++++++|+|+ |.+|++++..|.+.|.  .+|++.+|+.
T Consensus       115 l~~k~vlvlGa-Gg~g~aia~~L~~~G~--~~v~v~~R~~  151 (277)
T 3don_A          115 IEDAYILILGA-GGASKGIANELYKIVR--PTLTVANRTM  151 (277)
T ss_dssp             GGGCCEEEECC-SHHHHHHHHHHHTTCC--SCCEEECSCG
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCC--CEEEEEeCCH
Confidence            56889999996 7899999999999984  4788888875

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=96.03  E-value=0.0058  Score=47.97  Aligned_cols=34  Identities=21%  Similarity=0.262  Sum_probs=27.9

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEE
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV   70 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~   70 (177)
                      ++|.|.||+|.+|+.+++.|.++++....++.+.
T Consensus         7 ~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~   40 (340)
T 2hjs_A            7 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLA   40 (340)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEE
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEe
Confidence            6899999999999999999987665555666554

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=95.98  E-value=0.075  Score=41.48  Aligned_cols=108  Identities=11%  Similarity=0.049  Sum_probs=65.0

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      ..++|.|+|+ |.+|..++..|+..|. +..+++++.+++.  ++-...++...  . .+    . ...++ ....|..+
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~-~~ev~L~Di~~~~--~~g~a~DL~~~--~-~~----~-~~~~i-~~t~d~~~   86 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDL-ADEVALVDVMEDK--LKGEMMDLEHG--S-LF----L-HTAKI-VSGKDYSV   86 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCC-CSEEEEECSCHHH--HHHHHHHHHHH--G-GG----S-CCSEE-EEESSSCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCC-CCeEEEEECCHHH--HHHHHHHhhhh--h-hc----c-cCCeE-EEcCCHHH
Confidence            3578999998 9999999999999874 3578888875411  11111111110  0 00    0 01112 12234332


Q ss_pred             CCCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        115 EHLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                                   ++++|+||-+||.... .++-.+.+..|+.-...+.+.+.++
T Consensus        87 -------------~~daDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~  128 (330)
T 3ldh_A           87 -------------SAGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKH  128 (330)
T ss_dssp             -------------CSSCSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHH
T ss_pred             -------------hCCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh
Confidence                         4789999999986432 2333346778888888887777765

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=95.97  E-value=0.0085  Score=47.27  Aligned_cols=37  Identities=19%  Similarity=0.256  Sum_probs=28.1

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCC-C--cCeEEEEEeC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFP-D--IGAIYIMVRD   72 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~-~--~~~v~~~~r~   72 (177)
                      +++|.|.||+|.+|..+++.|++.++ .  ..+++.+.++
T Consensus         9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~   48 (352)
T 2nqt_A            9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAA   48 (352)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEES
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECC
Confidence            47899999999999999999987640 0  1366666543

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=95.84  E-value=0.037  Score=43.10  Aligned_cols=36  Identities=11%  Similarity=0.108  Sum_probs=31.9

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .|.+++|+||+|.+|...++.+...|   .+|+++++++
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~G---a~Vi~~~~~~  185 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYG---LRVITTASRN  185 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEECCSH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcC---CEEEEEeCCH
Confidence            68899999999999999999998888   5899988754

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=95.76  E-value=0.037  Score=43.59  Aligned_cols=35  Identities=14%  Similarity=0.238  Sum_probs=30.1

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEe
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   71 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r   71 (177)
                      ..|.+++|+||+|.+|...++.+...|   .+|++.++
T Consensus       182 ~~g~~VlV~Ga~G~vG~~~~qla~~~G---a~Vi~~~~  216 (375)
T 2vn8_A          182 CTGKRVLILGASGGVGTFAIQVMKAWD---AHVTAVCS  216 (375)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCC---CEEEEEeC
Confidence            457899999999999999999888888   57888774

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=95.74  E-value=0.033  Score=42.94  Aligned_cols=37  Identities=16%  Similarity=0.234  Sum_probs=31.2

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      ...|.+++|+||+|.+|...++.+...|   .+|++.++.
T Consensus       150 ~~~g~~vlV~Ga~G~vG~~a~q~a~~~G---a~vi~~~~~  186 (321)
T 3tqh_A          150 VKQGDVVLIHAGAGGVGHLAIQLAKQKG---TTVITTASK  186 (321)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEECH
T ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHHcC---CEEEEEecc
Confidence            3468899999999999999999998888   588887653

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=95.73  E-value=0.074  Score=40.66  Aligned_cols=38  Identities=16%  Similarity=0.107  Sum_probs=32.8

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..+.+++++|.|+ |.+|..+++.|...|   .+|++.+|+.
T Consensus       153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G---~~V~~~d~~~  190 (300)
T 2rir_A          153 YTIHGSQVAVLGL-GRTGMTIARTFAALG---ANVKVGARSS  190 (300)
T ss_dssp             SCSTTSEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESSH
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHHCC---CEEEEEECCH
Confidence            3467899999995 999999999999998   5899988864

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=95.73  E-value=0.1  Score=40.00  Aligned_cols=104  Identities=9%  Similarity=0.099  Sum_probs=60.9

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhh--hhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNS--VIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      ++|.|+| .|.+|..++..|.+.|. ...|++.++++      ++++....+  +... +      ...++.....|.  
T Consensus         2 ~kI~VIG-aG~~G~~la~~L~~~g~-~~~V~l~d~~~------~~~~~~~~~l~~~~~-~------~~~~~~~~~~d~--   64 (309)
T 1hyh_A            2 RKIGIIG-LGNVGAAVAHGLIAQGV-ADDYVFIDANE------AKVKADQIDFQDAMA-N------LEAHGNIVINDW--   64 (309)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTC-CSEEEEECSSH------HHHHHHHHHHHHHGG-G------SSSCCEEEESCG--
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCC-CCEEEEEcCCH------HHHHHHHHHHHhhhh-h------cCCCeEEEeCCH--
Confidence            6899999 89999999999999884 35888888864      222221110  0000 0      001223222222  


Q ss_pred             CCCCCCHHHHHHHhcCCcEEEEcCcccCc-----hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        115 EHLGLSEDSEQLIKSKVNIIFHCAASLRF-----DEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~-----~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                                 ..++++|+||-+++....     ..+..++...|+.....+++.+.+.
T Consensus        65 -----------~~~~~aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~  112 (309)
T 1hyh_A           65 -----------AALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKES  112 (309)
T ss_dssp             -----------GGGTTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHT
T ss_pred             -----------HHhCCCCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence                       235789999999886331     1122234566777777777776664

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=95.71  E-value=0.095  Score=40.35  Aligned_cols=107  Identities=13%  Similarity=0.024  Sum_probs=62.4

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+|.|+|+ |.+|..++..|...+. ..+|++.++++..  . +.+..-+.+. ....    . ...++... .|     
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~-g~~V~l~D~~~~~--~-~~~~~~l~~~-~~~~----~-~~~~i~~t-~d-----   63 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQL-ARELVLLDVVEGI--P-QGKALDMYES-GPVG----L-FDTKVTGS-ND-----   63 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSSSH--H-HHHHHHHHTT-HHHH----T-CCCEEEEE-SC-----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCChhH--H-HHHHHhHHhh-hhcc----c-CCcEEEEC-CC-----
Confidence            47999998 9999999999988532 2689999987531  1 1111101110 0000    0 00112111 12     


Q ss_pred             CCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        117 LGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       117 ~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                             ++. ++++|+||-+++.... .....+.+..|+.....+.+.+.++
T Consensus        64 -------~~~-l~~aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~  108 (310)
T 1guz_A           64 -------YAD-TANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKH  108 (310)
T ss_dssp             -------GGG-GTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -------HHH-HCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence                   122 5789999999975322 2223456778888888888877765

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=95.69  E-value=0.09  Score=40.96  Aligned_cols=36  Identities=17%  Similarity=0.118  Sum_probs=29.9

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..|.+|+|+|+ |.+|...++.+...|   .+|+++++++
T Consensus       167 ~~g~~VlV~Ga-G~vG~~a~qla~~~G---a~Vi~~~~~~  202 (352)
T 1e3j_A          167 QLGTTVLVIGA-GPIGLVSVLAAKAYG---AFVVCTARSP  202 (352)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESCH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcC---CEEEEEcCCH
Confidence            46789999997 899999999888888   4688888754

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=95.65  E-value=0.034  Score=42.77  Aligned_cols=37  Identities=16%  Similarity=0.170  Sum_probs=32.2

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      .+.|++++|.|++.-+|+.++..|+..|   ++|+++.+.
T Consensus       162 ~l~gk~vvVIG~s~iVG~p~A~lL~~~g---AtVtv~hs~  198 (301)
T 1a4i_A          162 PIAGRHAVVVGRSKIVGAPMHDLLLWNN---ATVTTCHSK  198 (301)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTT---CEEEEECTT
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHhCC---CeEEEEECC
Confidence            4689999999999999999999999998   688877554

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=95.56  E-value=0.013  Score=44.53  Aligned_cols=37  Identities=27%  Similarity=0.462  Sum_probs=27.9

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEE-EEeCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYI-MVRDK   73 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~-~~r~~   73 (177)
                      ++++|.|+|++|.+|+.+++.+.+.. ++ .++. ++|+.
T Consensus         6 ~mikV~V~Ga~G~MG~~i~~~l~~~~-~~-eLv~~~d~~~   43 (272)
T 4f3y_A            6 SSMKIAIAGASGRMGRMLIEAVLAAP-DA-TLVGALDRTG   43 (272)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHHCT-TE-EEEEEBCCTT
T ss_pred             cccEEEEECCCCHHHHHHHHHHHhCC-CC-EEEEEEEecC
Confidence            35789999999999999999998763 33 4444 45553

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=95.55  E-value=0.0069  Score=48.04  Aligned_cols=35  Identities=29%  Similarity=0.326  Sum_probs=27.5

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEE
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV   70 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~   70 (177)
                      .++|.|.||+|++|..+++.|.+.++....+..+.
T Consensus         2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~a   36 (366)
T 3pwk_A            2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLA   36 (366)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEE
T ss_pred             CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEE
Confidence            35899999999999999999888654444555554

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=95.53  E-value=0.082  Score=41.03  Aligned_cols=35  Identities=17%  Similarity=0.415  Sum_probs=29.4

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .++|.|+|+ |.+|..++..|...|.  ..|++.++++
T Consensus         4 ~~kI~VIGa-G~vG~~ia~~la~~g~--~~v~L~Di~~   38 (322)
T 1t2d_A            4 KAKIVLVGS-GMIGGVMATLIVQKNL--GDVVLFDIVK   38 (322)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC--CEEEEECSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC--CeEEEEeCCH
Confidence            468999998 9999999999999884  2588888765

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=95.51  E-value=0.018  Score=45.37  Aligned_cols=37  Identities=22%  Similarity=0.304  Sum_probs=31.6

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      .+++.+|+|.|+ |.+|+++++.|...|.  .++.+++++
T Consensus       115 ~L~~~~VlvvG~-GglGs~va~~La~aGv--g~i~lvD~D  151 (353)
T 3h5n_A          115 KLKNAKVVILGC-GGIGNHVSVILATSGI--GEIILIDND  151 (353)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHHTC--SEEEEEECC
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHhCCC--CeEEEECCC
Confidence            456789999996 7799999999999984  788888875

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=95.51  E-value=0.047  Score=42.51  Aligned_cols=36  Identities=22%  Similarity=0.210  Sum_probs=30.8

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .|.+++|+|+ |.+|..+++.+...|.  .+|+++++++
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga--~~Vi~~~~~~  202 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGA--YPVIVSEPSD  202 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTC--CSEEEECSCH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEECCCH
Confidence            6889999999 9999999999888882  3899888764

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=95.50  E-value=0.099  Score=40.31  Aligned_cols=104  Identities=13%  Similarity=0.137  Sum_probs=63.7

Q ss_pred             eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEe-CCCCCCC
Q psy17489         38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIP-SNLESEH  116 (177)
Q Consensus        38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~D~~~~~  116 (177)
                      +|.|+|+ |.+|..++..|+..|.  ..++.+++++..  ++-...++... .. .       ......+.. .|.    
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~~~l--~el~L~Di~~~~--~~g~~~dl~~~-~~-~-------~~~~~~i~~t~d~----   62 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMMRGY--DDLLLIARTPGK--PQGEALDLAHA-AA-E-------LGVDIRISGSNSY----   62 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTC--SCEEEECSSTTH--HHHHHHHHHHH-HH-H-------HTCCCCEEEESCG----
T ss_pred             CEEEECc-CHHHHHHHHHHHhCCC--CEEEEEcCChhh--HHHHHHHHHHh-hh-h-------cCCCeEEEECCCH----
Confidence            4789998 9999999999998874  578888886521  21112211110 00 0       001222222 221    


Q ss_pred             CCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        117 LGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       117 ~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                               ..++++|+||-.++.... .++-.+....|+.....+.+.+.++
T Consensus        63 ---------~a~~~aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~  106 (308)
T 2d4a_B           63 ---------EDMRGSDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAY  106 (308)
T ss_dssp             ---------GGGTTCSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---------HHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence                     246899999999986432 2233456788888888888887765

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=95.50  E-value=0.04  Score=43.13  Aligned_cols=35  Identities=9%  Similarity=-0.038  Sum_probs=30.4

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .|.+++|+|+ |.+|...++.+...|   .+|+++++++
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~G---a~Vi~~~~~~  214 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMG---HHVTVISSSN  214 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHT---CEEEEEESST
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCC---CeEEEEeCCh
Confidence            6889999995 899999999888888   5899988865

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=95.50  E-value=0.03  Score=42.78  Aligned_cols=38  Identities=16%  Similarity=0.064  Sum_probs=32.9

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .+.|++++|.|+++-+|+.++..|+..|   ++|+.+.+..
T Consensus       156 ~l~gk~vvVIG~s~iVG~p~A~lL~~~g---AtVtv~hs~t  193 (288)
T 1b0a_A          156 DTFGLNAVVIGASNIVGRPMSMELLLAG---CTTTVTHRFT  193 (288)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTT---CEEEEECSSC
T ss_pred             CCCCCEEEEECCChHHHHHHHHHHHHCC---CeEEEEeCCc
Confidence            4689999999999999999999999998   6888776544

>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*

Probab=95.49  E-value=0.058  Score=42.73  Aligned_cols=36  Identities=14%  Similarity=0.156  Sum_probs=26.7

Q ss_pred             ceEEEecCCcchHHHHHHH-HHhhCCCcCeEEEEEeC
Q psy17489         37 GQILVTGGTGFMGKLLIDK-LLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~-L~~~g~~~~~v~~~~r~   72 (177)
                      ++|.|.||+|++|..+++. |.+.++.+..++.+..+
T Consensus         2 ~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~   38 (367)
T 1t4b_A            2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTS   38 (367)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS
T ss_pred             cEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeC
Confidence            5899999999999999995 44443334567666654

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=95.39  E-value=0.3  Score=37.35  Aligned_cols=105  Identities=15%  Similarity=0.125  Sum_probs=60.7

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHH-HHh-hhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKN-MLN-SVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      .++|.|+|+ |.+|..++..|...|+ ...|+.++|++      +++.. ... .+... +.       ........  .
T Consensus         7 ~mkI~IiGa-G~vG~~~a~~l~~~g~-~~~V~l~d~~~------~~~~~~~~~~~~~~~-~~-------~~~~v~~~--~   68 (319)
T 1lld_A            7 PTKLAVIGA-GAVGSTLAFAAAQRGI-AREIVLEDIAK------ERVEAEVLDMQHGSS-FY-------PTVSIDGS--D   68 (319)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSH------HHHHHHHHHHHHTGG-GS-------TTCEEEEE--S
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCCh------hHHHHHHHHHHhhhh-hc-------CCeEEEeC--C
Confidence            468999997 9999999999999883 23888888864      12210 000 11110 00       11222111  0


Q ss_pred             CCCCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        114 SEHLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                      +.          ..++++|+||-+++.... .++..+++..|+.....+++...+.
T Consensus        69 ~~----------~~~~~aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~  114 (319)
T 1lld_A           69 DP----------EICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV  114 (319)
T ss_dssp             CG----------GGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CH----------HHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            11          135688999999975432 2233446677777776776666554

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=95.35  E-value=0.096  Score=40.57  Aligned_cols=36  Identities=11%  Similarity=0.050  Sum_probs=30.5

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..|.+++|+|+ |.+|...++.+...|   .+|+++++++
T Consensus       165 ~~g~~VlV~Ga-G~vG~~a~qla~~~G---a~Vi~~~~~~  200 (340)
T 3s2e_A          165 RPGQWVVISGI-GGLGHVAVQYARAMG---LRVAAVDIDD  200 (340)
T ss_dssp             CTTSEEEEECC-STTHHHHHHHHHHTT---CEEEEEESCH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCC---CeEEEEeCCH
Confidence            46789999997 889999999888888   5899988864

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=95.33  E-value=0.13  Score=39.26  Aligned_cols=37  Identities=16%  Similarity=0.196  Sum_probs=32.4

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .+.+++++|.| .|.+|..+++.|...|   .+|++.+|+.
T Consensus       152 ~l~g~~v~IiG-~G~iG~~~a~~l~~~G---~~V~~~dr~~  188 (293)
T 3d4o_A          152 TIHGANVAVLG-LGRVGMSVARKFAALG---AKVKVGARES  188 (293)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEEESSH
T ss_pred             CCCCCEEEEEe-eCHHHHHHHHHHHhCC---CEEEEEECCH
Confidence            46789999999 6899999999999988   5899888864

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=95.32  E-value=0.046  Score=42.79  Aligned_cols=37  Identities=16%  Similarity=0.147  Sum_probs=29.9

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..|.+|+|+|+ |.+|...++.+...|.  ..|++.++++
T Consensus       178 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga--~~Vi~~~~~~  214 (363)
T 3m6i_A          178 RLGDPVLICGA-GPIGLITMLCAKAAGA--CPLVITDIDE  214 (363)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHHTTC--CSEEEEESCH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEECCCH
Confidence            46889999998 9999999988888873  3488887764

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=95.31  E-value=0.35  Score=37.29  Aligned_cols=103  Identities=13%  Similarity=0.016  Sum_probs=61.1

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHh--hhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLN--SVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      |+|.|+|+ |.+|..++..|+..|+ ...|++.++++      +++.....  .+....        .........|   
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g~-~~~V~l~D~~~------~~~~~~~~~l~~~~~~--------~~~~~i~~~d---   61 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKGF-AREMVLIDVDK------KRAEGDALDLIHGTPF--------TRRANIYAGD---   61 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSH------HHHHHHHHHHHHHGGG--------SCCCEEEECC---
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCC-CCeEEEEeCCh------HHHHHHHHHHHhhhhh--------cCCcEEEeCC---
Confidence            47899997 9999999999999984 34899888864      22222111  001100        0112222112   


Q ss_pred             CCCCCCHHHHHHHhcCCcEEEEcCcccCch-HHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        115 EHLGLSEDSEQLIKSKVNIIFHCAASLRFD-EALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~-~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                      .          ..++++|+||-+++..... ++-.+....|+.....+.+.+.+.
T Consensus        62 ~----------~~~~~aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~  106 (319)
T 1a5z_A           62 Y----------ADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKY  106 (319)
T ss_dssp             G----------GGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             H----------HHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence            1          1357899999999864321 123345677777777777776654

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=95.30  E-value=0.027  Score=44.45  Aligned_cols=36  Identities=22%  Similarity=0.349  Sum_probs=28.2

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      +.++|.|.||+|.+|..+++.|.+.. . .+++.+.+.
T Consensus        15 ~~~kV~IiGAtG~iG~~llr~L~~~p-~-~elvai~~~   50 (359)
T 1xyg_A           15 KDIRIGLLGASGYTGAEIVRLLANHP-H-FQVTLMTAD   50 (359)
T ss_dssp             CCEEEEEECCSSHHHHHHHHHHHTCS-S-EEEEEEBCS
T ss_pred             cCcEEEEECcCCHHHHHHHHHHHcCC-C-cEEEEEeCc
Confidence            34689999999999999999998763 3 366666543

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=95.27  E-value=0.0058  Score=46.51  Aligned_cols=35  Identities=23%  Similarity=0.323  Sum_probs=25.7

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEE-EEEeC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIY-IMVRD   72 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~-~~~r~   72 (177)
                      .++|.|+|++|.+|+.+++.+.+.. + ..++ +++++
T Consensus         5 ~mkV~V~Ga~G~mG~~~~~~~~~~~-~-~elva~~d~~   40 (273)
T 1dih_A            5 NIRVAIAGAGGRMGRQLIQAALALE-G-VQLGAALERE   40 (273)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHST-T-EECCCEECCT
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCC-C-CEEEEEEecC
Confidence            4689999999999999999987542 2 3555 33443

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=95.24  E-value=0.11  Score=40.39  Aligned_cols=37  Identities=14%  Similarity=0.164  Sum_probs=33.0

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      .+.|++++|.|++.-+|..++..|+..|   .+|++++|+
T Consensus       174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~g---AtVtv~nR~  210 (320)
T 1edz_A          174 RLYGKKCIVINRSEIVGRPLAALLANDG---ATVYSVDVN  210 (320)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTS---CEEEEECSS
T ss_pred             CCCCCEEEEECCCcchHHHHHHHHHHCC---CEEEEEeCc
Confidence            5789999999998899999999999998   688888775

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=95.17  E-value=0.15  Score=40.00  Aligned_cols=36  Identities=11%  Similarity=0.160  Sum_probs=30.7

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..|.+++|+| +|.+|...++.+...|   .+|+++++++
T Consensus       188 ~~g~~VlV~G-~G~vG~~a~qla~~~G---a~Vi~~~~~~  223 (363)
T 3uog_A          188 RAGDRVVVQG-TGGVALFGLQIAKATG---AEVIVTSSSR  223 (363)
T ss_dssp             CTTCEEEEES-SBHHHHHHHHHHHHTT---CEEEEEESCH
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcC---CEEEEEecCc
Confidence            3578999999 8999999999888888   5899988764

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=95.15  E-value=0.049  Score=41.48  Aligned_cols=38  Identities=16%  Similarity=0.114  Sum_probs=32.2

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhh--CCCcCeEEEEEeCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRS--FPDIGAIYIMVRDK   73 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~--g~~~~~v~~~~r~~   73 (177)
                      .+.|++++|.|++.-+|+.++..|+..  |   .+|+...++.
T Consensus       155 ~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~---atVtv~h~~t  194 (281)
T 2c2x_A          155 SIAGAHVVVIGRGVTVGRPLGLLLTRRSEN---ATVTLCHTGT  194 (281)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHTSTTTC---CEEEEECTTC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHhcCCCC---CEEEEEECch
Confidence            478999999999999999999999988  5   6888775543

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=95.11  E-value=0.093  Score=41.01  Aligned_cols=35  Identities=20%  Similarity=0.189  Sum_probs=28.5

Q ss_pred             ceEEEecCCcchHHHH-HHHH-HhhCCCcCeEEEEEeCCC
Q psy17489         37 GQILVTGGTGFMGKLL-IDKL-LRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l-~~~L-~~~g~~~~~v~~~~r~~~   74 (177)
                      .+|+|+|+ |.+|... ++.+ ...|.  .+|+++++++.
T Consensus       174 ~~VlV~Ga-G~vG~~a~iqla~k~~Ga--~~Vi~~~~~~~  210 (357)
T 2b5w_A          174 SSAFVLGN-GSLGLLTLAMLKVDDKGY--ENLYCLGRRDR  210 (357)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHCTTCC--CEEEEEECCCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHHHcCC--cEEEEEeCCcc
Confidence            89999999 9999998 8777 66772  34999998763

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=95.10  E-value=0.063  Score=42.74  Aligned_cols=35  Identities=17%  Similarity=0.029  Sum_probs=31.2

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .+.+++|+|+ |-+|..+++.+...|   .+|++.+|+.
T Consensus       183 ~~~kV~ViG~-G~iG~~aa~~a~~lG---a~V~v~D~~~  217 (381)
T 3p2y_A          183 KPASALVLGV-GVAGLQALATAKRLG---AKTTGYDVRP  217 (381)
T ss_dssp             CCCEEEEESC-SHHHHHHHHHHHHHT---CEEEEECSSG
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCC---CEEEEEeCCH
Confidence            5689999996 899999999999999   5899998876

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=95.06  E-value=0.055  Score=42.39  Aligned_cols=35  Identities=23%  Similarity=0.362  Sum_probs=27.2

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      +++|.|.|++|++|..+++.|.+. ++ ..+..+..+
T Consensus         4 M~kv~IvGatG~vG~~l~~~L~~~-p~-~el~~l~s~   38 (337)
T 3dr3_A            4 MLNTLIVGASGYAGAELVTYVNRH-PH-MNITALTVS   38 (337)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHC-TT-EEEEEEEEE
T ss_pred             ceEEEEECCCChHHHHHHHHHHhC-CC-CcEEEEEec
Confidence            368999999999999999999875 33 366655443

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=95.02  E-value=0.04  Score=43.41  Aligned_cols=37  Identities=14%  Similarity=0.050  Sum_probs=30.6

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~   74 (177)
                      ..|.+|+|+|+ |.+|...++.+...|   .+|+++++++.
T Consensus       193 ~~g~~VlV~Ga-G~vG~~aiqlak~~G---a~Vi~~~~~~~  229 (369)
T 1uuf_A          193 GPGKKVGVVGI-GGLGHMGIKLAHAMG---AHVVAFTTSEA  229 (369)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESSGG
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCC---CEEEEEeCCHH
Confidence            35789999997 789999998888888   57999888653

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=94.99  E-value=0.085  Score=40.30  Aligned_cols=35  Identities=31%  Similarity=0.375  Sum_probs=30.4

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      +++|.|.||.|.+|..++..|.+.|   ..|++.+|++
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G---~~V~~~~~~~   55 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASG---YPISILDRED   55 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTT---CCEEEECTTC
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCC---CeEEEEECCc
Confidence            4689999999999999999999998   4788888765

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=94.98  E-value=0.024  Score=42.93  Aligned_cols=36  Identities=22%  Similarity=0.233  Sum_probs=31.9

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      +++++++|+|+ |.+|+.++..|.+.|   .+|++.+|+.
T Consensus       117 ~~~~~vlvlGa-Gg~g~a~a~~L~~~G---~~v~v~~R~~  152 (272)
T 1p77_A          117 RPNQHVLILGA-GGATKGVLLPLLQAQ---QNIVLANRTF  152 (272)
T ss_dssp             CTTCEEEEECC-SHHHHTTHHHHHHTT---CEEEEEESSH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCC---CEEEEEECCH
Confidence            56899999997 789999999999998   6899988875

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=94.98  E-value=0.11  Score=42.04  Aligned_cols=37  Identities=16%  Similarity=0.184  Sum_probs=31.5

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..|.+|+|+||+|.+|...++.+...|   .+|+++++++
T Consensus       227 ~~g~~VlV~GasG~vG~~avqlak~~G---a~vi~~~~~~  263 (456)
T 3krt_A          227 KQGDNVLIWGASGGLGSYATQFALAGG---ANPICVVSSP  263 (456)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcC---CeEEEEECCH
Confidence            457899999999999999999998888   5888887653

>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A

Probab=94.95  E-value=0.014  Score=45.80  Aligned_cols=35  Identities=20%  Similarity=0.185  Sum_probs=27.2

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEE
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV   70 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~   70 (177)
                      +++|.|.||+|++|..+++.|.+..+....+..+.
T Consensus         1 ~~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~   35 (344)
T 3tz6_A            1 GLSIGIVGATGQVGQVMRTLLDERDFPASAVRFFA   35 (344)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCceEEEEEE
Confidence            46899999999999999998887643334566554

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=94.87  E-value=0.14  Score=40.04  Aligned_cols=36  Identities=14%  Similarity=0.242  Sum_probs=30.6

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhh-CCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRS-FPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~-g~~~~~v~~~~r~~   73 (177)
                      ..|.+|+|+|+ |.+|...++.+... |   .+|+++++++
T Consensus       185 ~~g~~VlV~Ga-G~vG~~avqlak~~~G---a~Vi~~~~~~  221 (359)
T 1h2b_A          185 YPGAYVAIVGV-GGLGHIAVQLLKVMTP---ATVIALDVKE  221 (359)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHCC---CEEEEEESSH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCC---CeEEEEeCCH
Confidence            46789999999 89999999888888 8   5899998764

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=94.87  E-value=0.07  Score=39.99  Aligned_cols=36  Identities=22%  Similarity=0.350  Sum_probs=30.5

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      +++ +++|.|+ |..|++++..|.+.|.  .+|++.+|+.
T Consensus       107 ~~~-~vliiGa-Gg~a~ai~~~L~~~G~--~~I~v~nR~~  142 (253)
T 3u62_A          107 VKE-PVVVVGA-GGAARAVIYALLQMGV--KDIWVVNRTI  142 (253)
T ss_dssp             CCS-SEEEECC-SHHHHHHHHHHHHTTC--CCEEEEESCH
T ss_pred             CCC-eEEEECc-HHHHHHHHHHHHHcCC--CEEEEEeCCH
Confidence            467 9999995 8899999999999984  5889888864

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=94.86  E-value=0.11  Score=41.69  Aligned_cols=35  Identities=20%  Similarity=0.162  Sum_probs=31.1

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .+.+|+|+|+ |-+|..+++.+...|   .+|++.++++
T Consensus       189 ~~~kV~ViG~-G~iG~~aa~~a~~lG---a~V~v~D~~~  223 (405)
T 4dio_A          189 PAAKIFVMGA-GVAGLQAIATARRLG---AVVSATDVRP  223 (405)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTT---CEEEEECSST
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCC---CEEEEEcCCH
Confidence            5679999996 899999999999999   6899998876

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=94.85  E-value=0.18  Score=39.09  Aligned_cols=34  Identities=18%  Similarity=0.027  Sum_probs=28.9

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .++|.|.|+ |.+|..++..|.+.|   ..|++.+|++
T Consensus         4 ~mki~iiG~-G~~G~~~a~~L~~~g---~~V~~~~r~~   37 (359)
T 1bg6_A            4 SKTYAVLGL-GNGGHAFAAYLALKG---QSVLAWDIDA   37 (359)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTT---CEEEEECSCH
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCC---CEEEEEeCCH
Confidence            468999995 999999999999998   5788888764

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=94.80  E-value=0.17  Score=39.87  Aligned_cols=37  Identities=19%  Similarity=0.215  Sum_probs=31.4

Q ss_pred             CCCceEEEec-CCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTG-GTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG-~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..+.+++|.| |+|.+|...++.+...|   .+|+++++++
T Consensus       169 ~~g~~vlV~gag~G~vG~~a~q~a~~~G---a~Vi~~~~~~  206 (379)
T 3iup_A          169 LEGHSALVHTAAASNLGQMLNQICLKDG---IKLVNIVRKQ  206 (379)
T ss_dssp             HTTCSCEEESSTTSHHHHHHHHHHHHHT---CCEEEEESSH
T ss_pred             cCCCEEEEECCCCCHHHHHHHHHHHHCC---CEEEEEECCH
Confidence            3578899997 89999999999998888   5899888764

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=94.78  E-value=0.17  Score=39.32  Aligned_cols=34  Identities=21%  Similarity=0.271  Sum_probs=29.3

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ++|.|+|| |.+|..++..|...|+  ..|++.++++
T Consensus        15 ~kI~ViGa-G~vG~~iA~~la~~g~--~~V~L~Di~~   48 (328)
T 2hjr_A           15 KKISIIGA-GQIGSTIALLLGQKDL--GDVYMFDIIE   48 (328)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC--CEEEEECSST
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCC--CeEEEEECCH
Confidence            58999997 9999999999999884  2688888875

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=94.76  E-value=0.2  Score=38.79  Aligned_cols=39  Identities=15%  Similarity=0.126  Sum_probs=33.6

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~   74 (177)
                      ..+.|+++.|.| .|-||+.+++.|...|   .+|++.+|+..
T Consensus       135 ~~l~g~tvGIiG-~G~IG~~vA~~l~~~G---~~V~~~dr~~~  173 (315)
T 3pp8_A          135 YTREEFSVGIMG-AGVLGAKVAESLQAWG---FPLRCWSRSRK  173 (315)
T ss_dssp             CCSTTCCEEEEC-CSHHHHHHHHHHHTTT---CCEEEEESSCC
T ss_pred             CCcCCCEEEEEe-eCHHHHHHHHHHHHCC---CEEEEEcCCch
Confidence            346799999999 7999999999999998   58888888764

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=94.68  E-value=0.11  Score=41.22  Aligned_cols=37  Identities=19%  Similarity=0.116  Sum_probs=31.7

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~   74 (177)
                      +.+++++|+|+ |.+|..+++.+...|   .+|++.++++.
T Consensus       170 l~g~~V~ViGa-G~iG~~aa~~a~~~G---a~V~~~d~~~~  206 (384)
T 1l7d_A          170 VPPARVLVFGV-GVAGLQAIATAKRLG---AVVMATDVRAA  206 (384)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTT---CEEEEECSCST
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCC---CEEEEEeCCHH
Confidence            46889999995 899999999999998   57998888753

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=94.67  E-value=0.23  Score=39.35  Aligned_cols=37  Identities=8%  Similarity=0.110  Sum_probs=30.4

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..|.+|+|+|+ |.+|...++.+...|.  .+|+++++++
T Consensus       184 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga--~~Vi~~~~~~  220 (398)
T 2dph_A          184 KPGSHVYIAGA-GPVGRCAAAGARLLGA--ACVIVGDQNP  220 (398)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTC--SEEEEEESCH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEEcCCH
Confidence            35789999996 9999999888887872  3899998764

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=94.66  E-value=0.14  Score=41.92  Aligned_cols=79  Identities=8%  Similarity=0.193  Sum_probs=48.3

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhC-CCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSF-PDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g-~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      ++|+|.| .|.||+.++..+.+.. .....|++.+.........+   .                  ..+.+...+++..
T Consensus        14 ~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~---~------------------~g~~~~~~~Vdad   71 (480)
T 2ph5_A           14 NRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQ---Q------------------YGVSFKLQQITPQ   71 (480)
T ss_dssp             SCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHH---H------------------HTCEEEECCCCTT
T ss_pred             CCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHh---h------------------cCCceeEEeccch
Confidence            5799999 8999999999999874 22247887776654432211   1                  1245565666554


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCcc
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAAS  140 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa~  140 (177)
                      ..   .+.+..++++-|+|||.+-+
T Consensus        72 nv---~~~l~aLl~~~DvVIN~s~~   93 (480)
T 2ph5_A           72 NY---LEVIGSTLEENDFLIDVSIG   93 (480)
T ss_dssp             TH---HHHTGGGCCTTCEEEECCSS
T ss_pred             hH---HHHHHHHhcCCCEEEECCcc
Confidence            21   01233455556999986644

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=94.63  E-value=0.18  Score=39.82  Aligned_cols=71  Identities=13%  Similarity=0.210  Sum_probs=50.0

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+.+++|+|.| +|.+|..+++.+.+.|   .+|++++..+.....                      ... -.++..|.
T Consensus         9 ~~~~~~IlIlG-~G~lg~~la~aa~~lG---~~viv~d~~~~~p~~----------------------~~a-d~~~~~~~   61 (377)
T 3orq_A            9 LKFGATIGIIG-GGQLGKMMAQSAQKMG---YKVVVLDPSEDCPCR----------------------YVA-HEFIQAKY   61 (377)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEEESCTTCTTG----------------------GGS-SEEEECCT
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCC---CEEEEEECCCCChhh----------------------hhC-CEEEECCC
Confidence            35678999999 5778999999999999   588888876532210                      001 13456777


Q ss_pred             CCCCCCCCHHHHHHHhcCCcEEEE
Q psy17489        113 ESEHLGLSEDSEQLIKSKVNIIFH  136 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~d~vi~  136 (177)
                      .|.      +.+..+.+.+|+|..
T Consensus        62 ~d~------~~l~~~~~~~dvi~~   79 (377)
T 3orq_A           62 DDE------KALNQLGQKCDVITY   79 (377)
T ss_dssp             TCH------HHHHHHHHHCSEEEE
T ss_pred             CCH------HHHHHHHHhCCccee
Confidence            776      677777778888754

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=94.58  E-value=0.43  Score=36.45  Aligned_cols=39  Identities=10%  Similarity=0.030  Sum_probs=34.2

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~   74 (177)
                      ..+.|+++.|.| .|.||..+++.|...|   .+|++.+|+..
T Consensus       118 ~~l~g~tvGIIG-lG~IG~~vA~~l~~~G---~~V~~~dr~~~  156 (290)
T 3gvx_A          118 TLLYGKALGILG-YGGIGRRVAHLAKAFG---MRVIAYTRSSV  156 (290)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHHT---CEEEEECSSCC
T ss_pred             eeeecchheeec-cCchhHHHHHHHHhhC---cEEEEEecccc
Confidence            347899999999 8999999999999999   58999988754

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=94.54  E-value=0.011  Score=46.10  Aligned_cols=36  Identities=22%  Similarity=0.292  Sum_probs=30.6

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .|.+++|+|+ |.+|..+++.+...|.  .+|+++++++
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga--~~Vi~~~~~~  199 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGA--GPILVSDPNP  199 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTC--CSEEEECSCH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEECCCH
Confidence            6889999999 9999999998888882  3899988764

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=94.53  E-value=0.11  Score=39.15  Aligned_cols=36  Identities=25%  Similarity=0.419  Sum_probs=30.6

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      +.+++++|.|+ |.+|+.++..|.+.|   .+|++.+|+.
T Consensus       127 ~~~~~v~iiGa-G~~g~aia~~L~~~g---~~V~v~~r~~  162 (275)
T 2hk9_A          127 VKEKSILVLGA-GGASRAVIYALVKEG---AKVFLWNRTK  162 (275)
T ss_dssp             GGGSEEEEECC-SHHHHHHHHHHHHHT---CEEEEECSSH
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHcC---CEEEEEECCH
Confidence            46789999995 789999999999998   3888888764

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=94.52  E-value=0.056  Score=41.19  Aligned_cols=37  Identities=24%  Similarity=0.379  Sum_probs=32.0

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      +++++++|+|+ |.+|+.++..|.+.|.  .+|++.+|+.
T Consensus       124 l~~k~vlvlGa-Gg~g~aia~~L~~~G~--~~v~v~~R~~  160 (281)
T 3o8q_A          124 LKGATILLIGA-GGAARGVLKPLLDQQP--ASITVTNRTF  160 (281)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTCC--SEEEEEESSH
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHhcCC--CeEEEEECCH
Confidence            57899999997 7899999999999883  5898888865

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=94.50  E-value=0.06  Score=41.92  Aligned_cols=37  Identities=14%  Similarity=0.254  Sum_probs=31.3

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~   74 (177)
                      ..|.+|+|+|+ |.+|...++.+...|   .+|+++++++.
T Consensus       175 ~~g~~VlV~Ga-G~vG~~a~qla~~~G---a~Vi~~~~~~~  211 (348)
T 3two_A          175 TKGTKVGVAGF-GGLGSMAVKYAVAMG---AEVSVFARNEH  211 (348)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHTT---CEEEEECSSST
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCC---CeEEEEeCCHH
Confidence            46889999997 999999998888888   58999888764

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=94.46  E-value=0.22  Score=37.70  Aligned_cols=37  Identities=24%  Similarity=0.308  Sum_probs=31.1

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .++|.|.|+ |.+|..++..|.+.|+...+|++.+|++
T Consensus         3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~   39 (280)
T 3tri_A            3 TSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSL   39 (280)
T ss_dssp             CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred             CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence            478999985 9999999999999985445888888875

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=94.44  E-value=0.031  Score=46.96  Aligned_cols=37  Identities=16%  Similarity=0.292  Sum_probs=30.8

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      .+++.+|+|.| .|++|+++++.|+..|  +.++..++.+
T Consensus       324 kL~~~kVLIVG-aGGLGs~va~~La~aG--VG~ItLvD~D  360 (598)
T 3vh1_A          324 IIKNTKVLLLG-AGTLGCYVSRALIAWG--VRKITFVDNG  360 (598)
T ss_dssp             HHHTCEEEEEC-CSHHHHHHHHHHHTTT--CCEEEEECCS
T ss_pred             HHhCCeEEEEC-CCHHHHHHHHHHHHcC--CCEEEEECCC
Confidence            45678999999 6779999999999988  4788888664

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=94.41  E-value=0.05  Score=44.70  Aligned_cols=37  Identities=16%  Similarity=0.072  Sum_probs=32.3

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .+.|++++|||++ .||..+++.|...|   .+|++.++++
T Consensus       262 ~L~GKtVvVtGaG-gIG~aiA~~Laa~G---A~Viv~D~~~  298 (488)
T 3ond_A          262 MIAGKVAVVAGYG-DVGKGCAAALKQAG---ARVIVTEIDP  298 (488)
T ss_dssp             CCTTCEEEEECCS-HHHHHHHHHHHHTT---CEEEEECSCH
T ss_pred             cccCCEEEEECCC-HHHHHHHHHHHHCC---CEEEEEcCCH
Confidence            4789999999976 99999999999999   6888887754

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=94.39  E-value=0.16  Score=40.49  Aligned_cols=37  Identities=14%  Similarity=0.250  Sum_probs=30.2

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..|.+|+|+|+ |.+|...++.+...|.  .+|+++++++
T Consensus       212 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga--~~Vi~~~~~~  248 (404)
T 3ip1_A          212 RPGDNVVILGG-GPIGLAAVAILKHAGA--SKVILSEPSE  248 (404)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEECSCH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEECCCH
Confidence            45789999998 9999999888888872  4888887654

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=94.38  E-value=0.24  Score=38.91  Aligned_cols=34  Identities=18%  Similarity=0.047  Sum_probs=29.5

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEE
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV   70 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~   70 (177)
                      ..|.+|+|+||+|.+|...++.+...|   .+|++..
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~G---a~Vi~~~  196 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSG---YIPIATC  196 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCC---CEEEEEe
Confidence            467899999999999999999998888   5788775

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=94.36  E-value=0.28  Score=39.69  Aligned_cols=36  Identities=14%  Similarity=0.128  Sum_probs=31.6

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      +.++++.|.|. |..|..+++.|.+.|   +.|.+.+++.
T Consensus         7 ~~~k~v~viG~-G~sG~s~A~~l~~~G---~~V~~~D~~~   42 (451)
T 3lk7_A            7 FENKKVLVLGL-ARSGEAAARLLAKLG---AIVTVNDGKP   42 (451)
T ss_dssp             TTTCEEEEECC-TTTHHHHHHHHHHTT---CEEEEEESSC
T ss_pred             cCCCEEEEEee-CHHHHHHHHHHHhCC---CEEEEEeCCc
Confidence            46899999997 789999999999999   6999998865

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=94.36  E-value=0.45  Score=36.91  Aligned_cols=39  Identities=21%  Similarity=0.145  Sum_probs=34.0

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~   74 (177)
                      ..+.|+++.|.| .|.||..+++.|...|   .+|++.+|+..
T Consensus       133 ~~l~gktvGIiG-lG~IG~~vA~~l~~~G---~~V~~~dr~~~  171 (324)
T 3evt_A          133 STLTGQQLLIYG-TGQIGQSLAAKASALG---MHVIGVNTTGH  171 (324)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEEESSCC
T ss_pred             ccccCCeEEEEC-cCHHHHHHHHHHHhCC---CEEEEECCCcc
Confidence            457899999998 8999999999999998   58999988753

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=94.33  E-value=0.061  Score=40.79  Aligned_cols=38  Identities=24%  Similarity=0.293  Sum_probs=32.2

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .+++++++|+|+ |.+|+.++..|.+.|.  .+|++.+|+.
T Consensus       117 ~l~~k~~lvlGa-Gg~~~aia~~L~~~G~--~~v~i~~R~~  154 (272)
T 3pwz_A          117 PLRNRRVLLLGA-GGAVRGALLPFLQAGP--SELVIANRDM  154 (272)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTCC--SEEEEECSCH
T ss_pred             CccCCEEEEECc-cHHHHHHHHHHHHcCC--CEEEEEeCCH
Confidence            357899999997 7899999999999883  5888888864

>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1

Probab=94.32  E-value=0.082  Score=41.62  Aligned_cols=35  Identities=23%  Similarity=0.329  Sum_probs=27.8

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEe
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   71 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r   71 (177)
                      .+.+|.|.||+|++|..+++.|.+. +. .++..+..
T Consensus        12 ~~~~V~IvGAtG~vG~ellrlL~~h-P~-~el~~l~S   46 (351)
T 1vkn_A           12 HMIRAGIIGATGYTGLELVRLLKNH-PE-AKITYLSS   46 (351)
T ss_dssp             CCEEEEEESTTSHHHHHHHHHHHHC-TT-EEEEEEEC
T ss_pred             ceeEEEEECCCCHHHHHHHHHHHcC-CC-cEEEEEeC
Confidence            4568999999999999999999987 33 46666543

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=94.31  E-value=0.12  Score=41.47  Aligned_cols=36  Identities=14%  Similarity=0.122  Sum_probs=31.3

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      +.+++|+|+|+ |.+|..+++.+...|   .+|++.+++.
T Consensus       170 l~g~~V~ViGa-G~iG~~aa~~a~~~G---a~V~v~D~~~  205 (401)
T 1x13_A          170 VPPAKVMVIGA-GVAGLAAIGAANSLG---AIVRAFDTRP  205 (401)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTT---CEEEEECSCG
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCC---CEEEEEcCCH
Confidence            45789999995 899999999999998   5899988865

>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}

Probab=94.21  E-value=0.28  Score=38.10  Aligned_cols=38  Identities=16%  Similarity=0.140  Sum_probs=33.4

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..+.|+++.|.| .|-||+.+++.|...|   .+|++.+|+.
T Consensus       136 ~~l~g~tvGIIG-lG~IG~~vA~~l~~~G---~~V~~~dr~~  173 (324)
T 3hg7_A          136 QGLKGRTLLILG-TGSIGQHIAHTGKHFG---MKVLGVSRSG  173 (324)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSSC
T ss_pred             cccccceEEEEE-ECHHHHHHHHHHHhCC---CEEEEEcCCh
Confidence            356799999999 8999999999999998   5899988875

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=94.17  E-value=0.49  Score=38.49  Aligned_cols=74  Identities=14%  Similarity=0.220  Sum_probs=51.0

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      -++++|.| +|-+|..+++.|.+.    ..|..+.+++      ++...+..             ..++..++.+|-+|.
T Consensus       235 ~~~v~I~G-gG~ig~~lA~~L~~~----~~v~iIE~d~------~r~~~la~-------------~l~~~~Vi~GD~td~  290 (461)
T 4g65_A          235 YRRIMIVG-GGNIGASLAKRLEQT----YSVKLIERNL------QRAEKLSE-------------ELENTIVFCGDAADQ  290 (461)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHTTT----SEEEEEESCH------HHHHHHHH-------------HCTTSEEEESCTTCH
T ss_pred             ccEEEEEc-chHHHHHHHHHhhhc----CceEEEecCH------HHHHHHHH-------------HCCCceEEeccccch
Confidence            46788888 678999999998643    4777776654      33332222             235788999999997


Q ss_pred             CCCCCHHHHHHH-hcCCcEEEEcCc
Q psy17489        116 HLGLSEDSEQLI-KSKVNIIFHCAA  139 (177)
Q Consensus       116 ~~~~~~~~~~~~-~~~~d~vi~~aa  139 (177)
                            +-+.+. ++++|+++-.-+
T Consensus       291 ------~~L~ee~i~~~D~~ia~T~  309 (461)
T 4g65_A          291 ------ELLTEENIDQVDVFIALTN  309 (461)
T ss_dssp             ------HHHHHTTGGGCSEEEECCS
T ss_pred             ------hhHhhcCchhhcEEEEccc
Confidence                  445443 467899998754

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=94.14  E-value=0.26  Score=37.97  Aligned_cols=35  Identities=26%  Similarity=0.249  Sum_probs=30.2

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .+++|.|.| .|.+|..++..|.+.|   ..|++.+|++
T Consensus        30 ~~~~I~iIG-~G~mG~~~a~~l~~~G---~~V~~~dr~~   64 (320)
T 4dll_A           30 YARKITFLG-TGSMGLPMARRLCEAG---YALQVWNRTP   64 (320)
T ss_dssp             CCSEEEEEC-CTTTHHHHHHHHHHTT---CEEEEECSCH
T ss_pred             CCCEEEEEC-ccHHHHHHHHHHHhCC---CeEEEEcCCH
Confidence            567899997 6999999999999999   5888888864

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=94.13  E-value=0.15  Score=39.96  Aligned_cols=37  Identities=16%  Similarity=0.248  Sum_probs=31.3

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      .+++.+|+|.| .|++|+++++.|...|.  .++..++++
T Consensus        31 kL~~~~VlIvG-aGGlGs~va~~La~aGV--g~ItlvD~D   67 (340)
T 3rui_A           31 IIKNTKVLLLG-AGTLGCYVSRALIAWGV--RKITFVDNG   67 (340)
T ss_dssp             HHHTCEEEEEC-CSHHHHHHHHHHHHTTC--CEEEEECCC
T ss_pred             HHhCCEEEEEC-CCHHHHHHHHHHHHcCC--CEEEEecCC
Confidence            35678999999 57899999999999984  788888774

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=94.13  E-value=0.15  Score=41.00  Aligned_cols=71  Identities=8%  Similarity=0.077  Sum_probs=49.2

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+.+++|+|.| +|.+|..++..+.+.|   .+|++++.++...  ...+                    . -..+..|+
T Consensus        32 ~~~~~~IlIlG-~G~lg~~~~~aa~~lG---~~v~v~d~~~~~p--~~~~--------------------a-d~~~~~~~   84 (419)
T 4e4t_A           32 ILPGAWLGMVG-GGQLGRMFCFAAQSMG---YRVAVLDPDPASP--AGAV--------------------A-DRHLRAAY   84 (419)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSCTTCH--HHHH--------------------S-SEEECCCT
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCC---CEEEEECCCCcCc--hhhh--------------------C-CEEEECCc
Confidence            45688999998 5789999999999999   4777776544321  1100                    0 12445677


Q ss_pred             CCCCCCCCHHHHHHHhcCCcEEEE
Q psy17489        113 ESEHLGLSEDSEQLIKSKVNIIFH  136 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~d~vi~  136 (177)
                      .|.      +.+..+.+++|+|+.
T Consensus        85 ~d~------~~l~~~a~~~D~V~~  102 (419)
T 4e4t_A           85 DDE------AALAELAGLCEAVST  102 (419)
T ss_dssp             TCH------HHHHHHHHHCSEEEE
T ss_pred             CCH------HHHHHHHhcCCEEEE
Confidence            766      677777788998884

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=94.04  E-value=0.052  Score=41.89  Aligned_cols=37  Identities=22%  Similarity=0.314  Sum_probs=31.4

Q ss_pred             CCc-eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489         35 RDG-QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        35 ~~~-~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~   74 (177)
                      .+. +++|+||+|.+|...++.+...|   .+|+++++++.
T Consensus       149 ~g~~~VlV~Ga~G~vG~~~~q~a~~~G---a~vi~~~~~~~  186 (330)
T 1tt7_A          149 PEKGSVLVTGATGGVGGIAVSMLNKRG---YDVVASTGNRE  186 (330)
T ss_dssp             GGGCCEEEESTTSHHHHHHHHHHHHHT---CCEEEEESSSS
T ss_pred             CCCceEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHH
Confidence            344 89999999999999999998888   57898888753

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=94.02  E-value=0.45  Score=37.52  Aligned_cols=72  Identities=11%  Similarity=0.078  Sum_probs=48.7

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+.+++++|.| +|.+|..+++.+.+.|   .+|++++.++.....                      .... ..+..+.
T Consensus        11 ~~~~k~IlIlG-~G~~g~~la~aa~~~G---~~vi~~d~~~~~~~~----------------------~~ad-~~~~~~~   63 (389)
T 3q2o_A           11 ILPGKTIGIIG-GGQLGRMMALAAKEMG---YKIAVLDPTKNSPCA----------------------QVAD-IEIVASY   63 (389)
T ss_dssp             CCTTSEEEEEC-CSHHHHHHHHHHHHTT---CEEEEEESSTTCTTT----------------------TTCS-EEEECCT
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcC---CEEEEEeCCCCCchH----------------------HhCC-ceEecCc
Confidence            35789999999 5569999999999999   578888765432110                      0011 2344566


Q ss_pred             CCCCCCCCHHHHHHHhcCCcEEEEc
Q psy17489        113 ESEHLGLSEDSEQLIKSKVNIIFHC  137 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~d~vi~~  137 (177)
                      .+.      +.+..+.+.+|+|...
T Consensus        64 ~d~------~~l~~~~~~~dvI~~~   82 (389)
T 3q2o_A           64 DDL------KAIQHLAEISDVVTYE   82 (389)
T ss_dssp             TCH------HHHHHHHHTCSEEEES
T ss_pred             CCH------HHHHHHHHhCCEeeec
Confidence            665      6777777888887543

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=93.97  E-value=0.17  Score=39.10  Aligned_cols=38  Identities=32%  Similarity=0.406  Sum_probs=31.3

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      +..++|.|.| .|.+|..++..|.+.|+. .+|++.+|++
T Consensus        31 ~~~~kI~IIG-~G~mG~slA~~l~~~G~~-~~V~~~dr~~   68 (314)
T 3ggo_A           31 LSMQNVLIVG-VGFMGGSFAKSLRRSGFK-GKIYGYDINP   68 (314)
T ss_dssp             CSCSEEEEES-CSHHHHHHHHHHHHTTCC-SEEEEECSCH
T ss_pred             cCCCEEEEEe-eCHHHHHHHHHHHhCCCC-CEEEEEECCH
Confidence            3457899999 899999999999999842 2888888865

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=93.95  E-value=0.29  Score=38.44  Aligned_cols=37  Identities=16%  Similarity=0.291  Sum_probs=30.0

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..|.+|+|+|+ |.+|...++.+...|.  ..|+++++++
T Consensus       181 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga--~~Vi~~~~~~  217 (370)
T 4ej6_A          181 KAGSTVAILGG-GVIGLLTVQLARLAGA--TTVILSTRQA  217 (370)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEECSCH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEECCCH
Confidence            45789999998 9999999988888883  4788887654

>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2

Probab=93.94  E-value=0.33  Score=39.72  Aligned_cols=38  Identities=21%  Similarity=0.191  Sum_probs=29.5

Q ss_pred             CceEEEecCCcchHHHHHHHHHhh--CCCcCeEEEEEeCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRS--FPDIGAIYIMVRDK   73 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~--g~~~~~v~~~~r~~   73 (177)
                      .++|.|.||++..|..++..|+..  +.....|...++++
T Consensus        28 ~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~   67 (472)
T 1u8x_X           28 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDK   67 (472)
T ss_dssp             CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCH
T ss_pred             CCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCH
Confidence            468999999887688888888877  43336899998865

>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*

Probab=93.91  E-value=0.46  Score=38.62  Aligned_cols=39  Identities=18%  Similarity=0.134  Sum_probs=32.3

Q ss_pred             ccccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         30 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        30 ~~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      +.-.+++|+++|.| .|-+|...++.|++.|   ++|++++.+
T Consensus         6 ~~~~l~~~~vlVvG-gG~va~~k~~~L~~~g---a~V~vi~~~   44 (457)
T 1pjq_A            6 IFCQLRDRDCLIVG-GGDVAERKARLLLEAG---ARLTVNALT   44 (457)
T ss_dssp             EEECCBTCEEEEEC-CSHHHHHHHHHHHHTT---BEEEEEESS
T ss_pred             eEEECCCCEEEEEC-CCHHHHHHHHHHHhCc---CEEEEEcCC
Confidence            34456899999999 5679999999999999   688888764

>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*

Probab=93.89  E-value=0.31  Score=38.78  Aligned_cols=73  Identities=10%  Similarity=0.298  Sum_probs=49.8

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      .|+.+++|+|.|| |.+|..+++.+.+.|   .+|++++ .+.....              ++       ......+..|
T Consensus        20 ~mm~~~~I~ilGg-G~lg~~l~~aa~~lG---~~v~~~d-~~~~p~~--------------~~-------ad~~~~~~~~   73 (403)
T 3k5i_A           20 HMWNSRKVGVLGG-GQLGRMLVESANRLN---IQVNVLD-ADNSPAK--------------QI-------SAHDGHVTGS   73 (403)
T ss_dssp             -CCSCCEEEEECC-SHHHHHHHHHHHHHT---CEEEEEE-STTCTTG--------------GG-------CCSSCCEESC
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHHHCC---CEEEEEE-CCCCcHH--------------Hh-------ccccceeecC
Confidence            3456789999995 689999999999999   5888888 5432211              00       0111345667


Q ss_pred             CCCCCCCCCHHHHHHHhcCCcEEEE
Q psy17489        112 LESEHLGLSEDSEQLIKSKVNIIFH  136 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~d~vi~  136 (177)
                      ..|.      +.+..+.+.+|+++.
T Consensus        74 ~~d~------~~l~~~a~~~d~i~~   92 (403)
T 3k5i_A           74 FKER------EAVRQLAKTCDVVTA   92 (403)
T ss_dssp             TTCH------HHHHHHHTTCSEEEE
T ss_pred             CCCH------HHHHHHHHhCCEEEE
Confidence            7776      778888888888764

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=93.84  E-value=0.37  Score=37.25  Aligned_cols=37  Identities=19%  Similarity=0.139  Sum_probs=29.8

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..+.+++|+|+ |.+|...++.+...|-  .+|+++++++
T Consensus       170 ~~g~~vlv~Ga-G~vG~~a~qla~~~g~--~~Vi~~~~~~  206 (345)
T 3jv7_A          170 GPGSTAVVIGV-GGLGHVGIQILRAVSA--ARVIAVDLDD  206 (345)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHCC--CEEEEEESCH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEEcCCH
Confidence            45789999997 9999998888877732  6899988765

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=93.67  E-value=0.47  Score=37.28  Aligned_cols=37  Identities=24%  Similarity=0.205  Sum_probs=32.8

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .+.|+++.|.| .|-||..+++.|...|   .+|+..+|+.
T Consensus       161 ~l~gktvGIIG-~G~IG~~vA~~l~~~G---~~V~~~dr~~  197 (351)
T 3jtm_A          161 DLEGKTIGTVG-AGRIGKLLLQRLKPFG---CNLLYHDRLQ  197 (351)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHGGGC---CEEEEECSSC
T ss_pred             cccCCEEeEEE-eCHHHHHHHHHHHHCC---CEEEEeCCCc
Confidence            47899999999 7999999999999998   5888888865

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=93.59  E-value=0.1  Score=39.48  Aligned_cols=35  Identities=20%  Similarity=0.198  Sum_probs=31.2

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~   74 (177)
                      +++++|+|+ |..|+.++..|.+.|   .+|++.+|+..
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G---~~v~V~nRt~~  152 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQG---LQVSVLNRSSR  152 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTT---CEEEEECSSCT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCC---CEEEEEeCCHH
Confidence            789999996 899999999999998   68999888763

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=93.57  E-value=0.061  Score=45.32  Aligned_cols=37  Identities=16%  Similarity=0.284  Sum_probs=31.2

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      +++.+|+|.| .|++|+.+++.|+..|  +.++..++.+.
T Consensus       324 L~~arVLIVG-aGGLGs~vA~~La~aG--VG~ItLvD~D~  360 (615)
T 4gsl_A          324 IKNTKVLLLG-AGTLGCYVSRALIAWG--VRKITFVDNGT  360 (615)
T ss_dssp             HHTCEEEEEC-CSHHHHHHHHHHHHTT--CCEEEEECCCB
T ss_pred             HhCCeEEEEC-CCHHHHHHHHHHHHcC--CCEEEEEcCCC
Confidence            4678999999 5789999999999988  47888888753

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=93.56  E-value=0.66  Score=36.34  Aligned_cols=38  Identities=16%  Similarity=0.062  Sum_probs=33.4

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..+.|+++.|.| .|-||..+++.+...|   .+|+..+|+.
T Consensus       169 ~~l~gktvGIIG-lG~IG~~vA~~l~~~G---~~V~~~dr~~  206 (345)
T 4g2n_A          169 MGLTGRRLGIFG-MGRIGRAIATRARGFG---LAIHYHNRTR  206 (345)
T ss_dssp             CCCTTCEEEEES-CSHHHHHHHHHHHTTT---CEEEEECSSC
T ss_pred             cccCCCEEEEEE-eChhHHHHHHHHHHCC---CEEEEECCCC
Confidence            457899999999 8999999999999988   5899988875

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=93.54  E-value=0.084  Score=38.32  Aligned_cols=34  Identities=18%  Similarity=0.217  Sum_probs=28.7

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ++++.|+| +|.+|..++..|.+.|   .+|++.+|+.
T Consensus        28 ~~~I~iiG-~G~~G~~la~~l~~~g---~~V~~~~r~~   61 (215)
T 2vns_A           28 APKVGILG-SGDFARSLATRLVGSG---FKVVVGSRNP   61 (215)
T ss_dssp             -CCEEEEC-CSHHHHHHHHHHHHTT---CCEEEEESSH
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHHCC---CEEEEEeCCH
Confidence            46899999 8999999999999998   4788888764

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=93.52  E-value=0.09  Score=39.75  Aligned_cols=34  Identities=18%  Similarity=0.205  Sum_probs=30.0

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ++|.|.|++|.+|..++..|.+.|   .+|++.+|++
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g---~~V~~~~r~~   45 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSA---HHLAAIEIAP   45 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSS---SEEEEECCSH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCC---CEEEEEECCH
Confidence            689999999999999999999998   4888887754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	177
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	6e-09
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	1e-07
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	3e-07
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	7e-07
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	4e-06
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	3e-05
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	3e-05
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	4e-05
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	5e-05
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	5e-05
d1eq2a_	307	c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer	6e-05
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	7e-05
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	1e-04
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	1e-04
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	1e-04
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	2e-04
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	3e-04
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	3e-04
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	3e-04
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	4e-04
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	5e-04
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	6e-04
d1gy8a_	383	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	0.001
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	0.002
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	0.003
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	0.003

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.6 bits (123), Expect = 6e-09
 Identities = 29/133 (21%), Positives = 52/133 (39%), Gaps = 33/133 (24%)

Query: 39  ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEV 98
           IL+TGG GF+G  L DKL+    ++  +     D   +  +  V++ +    F+ +N +V
Sbjct: 4   ILITGGAGFVGSHLTDKLMMDGHEVTVV-----DNFFTGRKRNVEHWIGHENFELINHDV 58

Query: 99  PDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQ---KAIRANL 155
            +                          +  +V+ I+H A+       +    K ++ N 
Sbjct: 59  VEP-------------------------LYIEVDQIYHLASPASPPNYMYNPIKTLKTNT 93

Query: 156 YATKQMLNLAKEC 168
             T  ML LAK  
Sbjct: 94  IGTLNMLGLAKRV 106

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 48.2 bits (114), Expect = 1e-07
 Identities = 21/133 (15%), Positives = 53/133 (39%), Gaps = 24/133 (18%)

Query: 39  ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEV 98
           IL+TGG GF+G  ++  ++++  D     + +     +   E + ++  S  ++  + ++
Sbjct: 3   ILITGGAGFIGSAVVRHIIKNTQD---TVVNIDKLTYAGNLESLSDISESNRYNFEHADI 59

Query: 99  PDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQ---KAIRANL 155
            D     ++                    + + + + H AA    D ++      I  N+
Sbjct: 60  CDSAEITRIFE------------------QYQPDAVMHLAAESHVDRSITGPAAFIETNI 101

Query: 156 YATKQMLNLAKEC 168
             T  +L +A++ 
Sbjct: 102 VGTYALLEVARKY 114

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 46.8 bits (109), Expect = 3e-07
 Identities = 15/66 (22%), Positives = 25/66 (37%)

Query: 32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIF 91
           F++  ++ VTG TGF G  L   L      +    +            RV + + S I 
Sbjct: 4  SFWQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIG 63

Query: 92 DRLNKE 97
          D  ++ 
Sbjct: 64 DIRDQN 69

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 45.7 bits (107), Expect = 7e-07
 Identities = 24/144 (16%), Positives = 52/144 (36%), Gaps = 33/144 (22%)

Query: 39  ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEV 98
           +LVTGG+G++G     +LL++  D+                         +I D L    
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDV-------------------------IILDNLCNSK 37

Query: 99  PDFRSKIQVIPSNLESEHLGLSEDSEQLIK----SKVNIIFHCAASLRFDEALQ---KAI 151
                 I+ +     +   G   +   + +      ++ + H A      E++Q   +  
Sbjct: 38  RSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYY 97

Query: 152 RANLYATKQMLNLAKECVNLKRFC 175
             N+  T ++++  +   N+K F 
Sbjct: 98  DNNVNGTLRLISAMRAA-NVKNFI 120

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 43.6 bits (101), Expect = 4e-06
 Identities = 16/93 (17%), Positives = 32/93 (34%), Gaps = 18/93 (19%)

Query: 17  ALPESPIMQEEQKVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGA-IYIMVRDKKG 75
           A  ++ ++ E            +LVTG  GF+   ++++LL      G  +    R    
Sbjct: 1   AKIDNAVLPEGSL---------VLVTGANGFVASHVVEQLLEH----GYKVRGTARSA-- 45

Query: 76  SSPEERVKNMLNSVIFDRLNKEV-PDFRSKIQV 107
            S    ++   ++    R    V  D   +   
Sbjct: 46  -SKLANLQKRWDAKYPGRFETAVVEDMLKQGAY 77

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 40.6 bits (93), Expect = 3e-05
 Identities = 10/36 (27%), Positives = 17/36 (47%), Gaps = 1/36 (2%)

Query: 39 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 74
          +LVTG +G  G+++  KL            +VR  +
Sbjct: 6  VLVTGASGRTGQIVYKKLKEGSDKF-VAKGLVRSAQ 40

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score = 40.6 bits (94), Expect = 3e-05
 Identities = 26/138 (18%), Positives = 50/138 (36%), Gaps = 18/138 (13%)

Query: 39  ILVTGGTGFMGKLLIDKLL-RSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKE 97
           +LVTGG GF+G   + +LL  ++PD+ A  ++V D    +              +R N  
Sbjct: 3   LLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYA-------------GNRANLA 49

Query: 98  VPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYA 157
             D   +++ +  ++    L      E      +      +   R           N+  
Sbjct: 50  PVDADPRLRFVHGDIRDAGL---LARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQG 106

Query: 158 TKQMLNLAKECVNLKRFC 175
           T+ +L  A +   + R  
Sbjct: 107 TQTLLQCAVDA-GVGRVV 123

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 40.7 bits (93), Expect = 4e-05
 Identities = 13/74 (17%), Positives = 29/74 (39%), Gaps = 1/74 (1%)

Query: 39  ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEV 98
           ++V GG G+ G      L +   ++  +  +VR              + S I DR+++  
Sbjct: 4   VMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIAS-IHDRISRWK 62

Query: 99  PDFRSKIQVIPSNL 112
                 I++   ++
Sbjct: 63  ALTGKSIELYVGDI 76

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 40.2 bits (92), Expect = 5e-05
 Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 3/46 (6%)

Query: 39 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKN 84
          IL+ G TG++G+ +    L         +++VR+   SS  E+ + 
Sbjct: 6  ILLIGATGYIGRHVAKASLDLGHP---TFLLVRESTASSNSEKAQL 48

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 40.1 bits (92), Expect = 5e-05
 Identities = 10/41 (24%), Positives = 23/41 (56%), Gaps = 3/41 (7%)

Query: 39 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPE 79
          +L+ GGTG++GK +++  +         Y++ R +  S+ +
Sbjct: 6  VLIVGGTGYIGKRIVNASISLGHP---TYVLFRPEVVSNID 43

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

 Score = 40.0 bits (91), Expect = 6e-05
 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 8/67 (11%)

Query: 39  ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEV 98
           I+VTGG GF+G  ++  L       G   I+V D        +  N+++  I D ++KE 
Sbjct: 2   IIVTGGAGFIGSNIVKALNDK----GITDILVVDNL--KDGTKFVNLVDLNIADYMDKE- 54

Query: 99  PDFRSKI 105
            DF  +I
Sbjct: 55  -DFLIQI 60

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 40.0 bits (92), Expect = 7e-05
 Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 6/69 (8%)

Query: 39  ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEV 98
           I+VTGG GF+G   +  +  + PD   +++ V DK   +     K  L +++ DR+   V
Sbjct: 5   IIVTGGAGFIGSNFVHYVYNNHPD---VHVTVLDKLTYAGN---KANLEAILGDRVELVV 58

Query: 99  PDFRSKIQV 107
            D      V
Sbjct: 59  GDIADAELV 67

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.0 bits (89), Expect = 1e-04
 Identities = 10/54 (18%), Positives = 22/54 (40%), Gaps = 1/54 (1%)

Query: 39 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFD 92
          + + G +G  G++L+ ++L        + ++ R K     E         V F+
Sbjct: 17 VFILGASGETGRVLLKEILEQ-GLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFE 69

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 38.9 bits (89), Expect = 1e-04
 Identities = 23/143 (16%), Positives = 44/143 (30%), Gaps = 31/143 (21%)

Query: 39  ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEV 98
           +L+TGG GF+G  L    L    D+                         ++FD L+++ 
Sbjct: 3   LLITGGCGFLGSNLASFALSQGIDL-------------------------IVFDNLSRKG 37

Query: 99  PDFRSKIQVIPSNLESEHLGLSEDS---EQLIKSKVNIIFHCAASLRFDEALQ---KAIR 152
                       N E  H  +   +     + K   +  FH A  +    ++        
Sbjct: 38  ATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFE 97

Query: 153 ANLYATKQMLNLAKECVNLKRFC 175
            N+  T  +L   ++  +     
Sbjct: 98  INVGGTLNLLEAVRQYNSNCNII 120

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.9 bits (89), Expect = 1e-04
 Identities = 20/105 (19%), Positives = 40/105 (38%), Gaps = 29/105 (27%)

Query: 39  ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEV 98
           +LVTGG G++G   + +L+ +  D                          V+ D L+   
Sbjct: 4   VLVTGGAGYIGSHTVVELIENGYDC-------------------------VVADNLSNST 38

Query: 99  PDFRSKIQVIPSNLESEHLGLSEDSEQLIK----SKVNIIFHCAA 139
            D  ++++V+  +    +     D + L K     K++ + H A 
Sbjct: 39  YDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHFAG 83

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.9 bits (89), Expect = 2e-04
 Identities = 13/66 (19%), Positives = 24/66 (36%)

Query: 39  ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEV 98
           +LVTGG G++G   + +LL +      I       +G          +  +    +  E 
Sbjct: 5   VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEE 64

Query: 99  PDFRSK 104
            D   +
Sbjct: 65  MDILDQ 70

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 38.2 bits (88), Expect = 3e-04
 Identities = 23/141 (16%), Positives = 48/141 (34%), Gaps = 22/141 (15%)

Query: 39  ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEV 98
            L+TG TG  G  L + LL    ++  I      ++ SS         N+   D + ++ 
Sbjct: 4   ALITGVTGQDGSYLAEFLLEKGYEVHGI-----KRRASS--------FNTERVDHIYQDP 50

Query: 99  PDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQ---KAIRANL 155
                K  +   +L       S  +  L + + + +++  A      + +        + 
Sbjct: 51  HTCNPKFHLHYGDLSDT----SNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDA 106

Query: 156 YATKQMLNLAKE--CVNLKRF 174
             T ++L   +        RF
Sbjct: 107 MGTLRLLEAIRFLGLEKKTRF 127

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 38.1 bits (87), Expect = 3e-04
 Identities = 14/43 (32%), Positives = 15/43 (34%), Gaps = 5/43 (11%)

Query: 39 ILVTGGTGFMGKLLIDKLLRSFPDIGA-IYIMVRDKKGSSPEE 80
          I V G TG  G  LI          G  +   V   KG   EE
Sbjct: 6  IAVVGATGRQGASLIRVAAAV----GHHVRAQVHSLKGLIAEE 44

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 37.4 bits (85), Expect = 3e-04
 Identities = 10/35 (28%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 39 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 73
          +L+ G TG  G+ L+D++L   P +  +    R  
Sbjct: 5  VLLAGATGLTGEHLLDRILSE-PTLAKVIAPARKA 38

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (85), Expect = 4e-04
 Identities = 8/34 (23%), Positives = 18/34 (52%), Gaps = 3/34 (8%)

Query: 39 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 72
          I + G TG  G   + + +++  +   + ++VRD
Sbjct: 6  IAIFGATGQTGLTTLAQAVQAGYE---VTVLVRD 36

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 37.2 bits (84), Expect = 5e-04
 Identities = 10/46 (21%), Positives = 19/46 (41%), Gaps = 4/46 (8%)

Query: 39 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKN 84
          +L+ G  GF+G  L ++LLR         +   D    +    + +
Sbjct: 3  VLILGVNGFIGNHLTERLLRE----DHYEVYGLDIGSDAISRFLNH 44

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 37.2 bits (85), Expect = 6e-04
 Identities = 18/130 (13%), Positives = 43/130 (33%), Gaps = 16/130 (12%)

Query: 39  ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEV 98
            L+TG  GF+G  L++ LL+    +  +       + +   + V+++++   +       
Sbjct: 19  WLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNL--DEVRSLVSEKQWSNFKFIQ 76

Query: 99  PDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYAT 158
            D R+      +    ++              V       +  R       +   N+   
Sbjct: 77  GDIRNLDDCNNACAGVDY--------------VLHQAALGSVPRSINDPITSNATNIDGF 122

Query: 159 KQMLNLAKEC 168
             ML  A++ 
Sbjct: 123 LNMLIAARDA 132

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

 Score = 36.3 bits (82), Expect = 0.001
 Identities = 9/20 (45%), Positives = 13/20 (65%)

Query: 39 ILVTGGTGFMGKLLIDKLLR 58
          +LV GG G++G   +  LLR
Sbjct: 5  VLVCGGAGYIGSHFVRALLR 24

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 35.7 bits (80), Expect = 0.002
 Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 2/55 (3%)

Query: 39 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGS-SPEERVKNMLNSVIFD 92
          IL+ G TG +G  L   L      I A+ +  ++  G  S  + V   +  +  D
Sbjct: 3  ILLFGKTGQVGWELQRSLAPVGNLI-ALDVHSKEFCGDFSNPKGVAETVRKLRPD 56

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 34.9 bits (79), Expect = 0.003
 Identities = 4/20 (20%), Positives = 10/20 (50%)

Query: 39 ILVTGGTGFMGKLLIDKLLR 58
          + + G  G +G  +  +L +
Sbjct: 5  VFIAGHRGMVGSAIRRQLEQ 24

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 34.9 bits (79), Expect = 0.003
 Identities = 6/20 (30%), Positives = 10/20 (50%)

Query: 39 ILVTGGTGFMGKLLIDKLLR 58
          I +TG  GF+   +  +L  
Sbjct: 18 ISITGAGGFIASHIARRLKH 37

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	177
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.81
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.75
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.75
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.75
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.74
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.73
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.73
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.71
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.7
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.69
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.67
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.67
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.66
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.65
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.65
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.64
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.64
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.64
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.63
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.63
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.63
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.63
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.63
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.63
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.63
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.63
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.62
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.62
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.62
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.62
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.62
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.62
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.62
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.62
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.61
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.61
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.61
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.61
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.6
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.6
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.6
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.6
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.6
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.6
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.59
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.59
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.58
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.58
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.57
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.56
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.56
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.55
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.55
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.55
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.55
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.55
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.55
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.54
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.54
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.53
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.52
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.52
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.52
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.51
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.51
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.51
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.5
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.5
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.48
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.48
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.46
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.46
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.44
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.44
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.43
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.42
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.4
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.4
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.34
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.32
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.31
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.28
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.27
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.27
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.26
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.25
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.24
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.14
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.1
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.07
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.06
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	98.91
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	98.88
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	98.86
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	98.84
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	98.8
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	98.06
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.06
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	98.0
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.99
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.96
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	97.93
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.87
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	97.79
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.72
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.69
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	97.61
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.61
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	97.61
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.59
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.58
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.56
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.54
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	97.45
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	97.45
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.43
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.37
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.37
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.34
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.33
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.31
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.3
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	97.25
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.14
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.08
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	97.04
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.02
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.0
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	96.98
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	96.93
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	96.89
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	96.89
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.89
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	96.83
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	96.8
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	96.78
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.69
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.59
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	96.45
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.42
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	96.41
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	96.39
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.38
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	96.18
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	96.18
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.16
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.09
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	96.06
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	96.05
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.02
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	96.01
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	96.0
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	95.96
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	95.93
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	95.88
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.85
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.83
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	95.73
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.71
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	95.7
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	95.62
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	95.58
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	95.56
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	95.52
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	95.52
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	95.47
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	95.43
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	95.37
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	95.37
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	95.35
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	95.33
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	95.29
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	95.14
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	95.01
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	94.98
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	94.89
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	94.87
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	94.84
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	94.82
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	94.77
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	94.76
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	94.68
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	94.55
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	94.45
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	94.4
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	94.37
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	94.36
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	94.35
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	94.35
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	94.22
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	94.22
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	94.18
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	94.1
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	94.07
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	94.06
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	93.89
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	93.79
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	93.77
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	93.72
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	93.71
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	93.64
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	93.57
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	93.48
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	93.4
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	93.37
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	93.28
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	93.27
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	93.25
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	93.01
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	92.92
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	92.85
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	92.81
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	92.8
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	92.65
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	92.6
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	92.58
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	92.53
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	92.46
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	92.37
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	92.24
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	92.03
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	91.75
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	91.66
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	91.58
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	91.47
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	91.3
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	91.3
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	91.05
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	90.96
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	90.77
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	90.74
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	90.64
d1vdca2	130	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	90.59
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	90.56
d1fl2a2	126	Alkyl hydroperoxide reductase subunit F (AhpF), C-	90.14
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	90.11
d1qkia1	203	Glucose 6-phosphate dehydrogenase, N-terminal doma	90.11
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	90.08
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	89.98
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	89.83
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	89.77
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	89.61
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	89.48
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	89.33
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	89.22
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	89.22
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	89.21
d1h9aa1	195	Glucose 6-phosphate dehydrogenase, N-terminal doma	89.06
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	89.01
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	88.97
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	88.57
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	88.33
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	87.77
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	87.76
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	87.64
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	87.42
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	87.3
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	87.18
d1trba2	126	Thioredoxin reductase {Escherichia coli [TaxId: 56	87.0
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	86.78
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	85.89
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	85.78
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	85.63
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	85.53
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	85.16
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	84.99
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	84.94
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	83.46
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	82.73
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	82.59
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	82.49
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	82.48
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	82.4
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	82.16
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	81.98
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	81.51
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	81.51
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	81.5
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	81.49
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	81.21
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	81.18
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	80.1

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.81  E-value=2.9e-19  Score=139.06  Aligned_cols=116  Identities=16%  Similarity=0.221  Sum_probs=93.1

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCC-hHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSS-PEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      |+||||||+||||++|++.|++.|   ..|++++|...... ....+.+..               ..++.++++|++|.
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g---~~V~~~d~~~~~~~~~~~~~~~~~---------------~~~~~~~~~Dl~d~   62 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNG---HDVIILDNLCNSKRSVLPVIERLG---------------GKHPTFVEGDIRNE   62 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCTTHHHHHHHHH---------------TSCCEEEECCTTCH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCc---CEEEEEECCCCcchhhHHHHHhhc---------------CCCCEEEEeecCCH
Confidence            579999999999999999999999   58999887543322 222222221               25799999999998


Q ss_pred             CCCCCHHHHHHHhc--CCcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        116 HLGLSEDSEQLIKS--KVNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       116 ~~~~~~~~~~~~~~--~~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                            +.+.++++  ++|+|||+||..+..   ++...++++|+.++.+++++|++. ++++|||.
T Consensus        63 ------~~l~~~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~-~v~~~i~~  122 (338)
T d1udca_          63 ------ALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNFIFS  122 (338)
T ss_dssp             ------HHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEE
T ss_pred             ------HHHHHHHhccCCCEEEECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHh-CCCEEEec
Confidence                  78888887  789999999986543   344578999999999999999998 89999873

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.75  E-value=8.1e-18  Score=131.11  Aligned_cols=116  Identities=17%  Similarity=0.257  Sum_probs=91.0

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChH-HHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPE-ERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      |.||||||+||||++|+..|++.|   .+|+++++........ ......               ...++.++.+|++|.
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g---~~V~~~d~~~~~~~~~~~~~~~~---------------~~~~v~~~~~Dl~d~   63 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENG---YDCVVADNLSNSTYDSVARLEVL---------------TKHHIPFYEVDLCDR   63 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCTHHHHHHHHH---------------HTSCCCEEECCTTCH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCc---CeEEEEECCCCcchhHHHhHHhh---------------cccCCeEEEeecCCH
Confidence            679999999999999999999999   5889888654332211 111111               125789999999998


Q ss_pred             CCCCCHHHHHHHhc--CCcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        116 HLGLSEDSEQLIKS--KVNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       116 ~~~~~~~~~~~~~~--~~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                            +.+..+++  ++|+|||+||.....   +....++.+|+.++.+++++|++. +++||||+
T Consensus        64 ------~~l~~~~~~~~~d~VihlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~-~i~~~i~~  123 (347)
T d1z45a2          64 ------KGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY-NVSKFVFS  123 (347)
T ss_dssp             ------HHHHHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEE
T ss_pred             ------HHHHHHHhccCCCEEEEccccccccccccCcccccccchhhhHHHHHHHHhc-ccceEEee
Confidence                  78888776  789999999986532   334567899999999999999998 99999874

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=2.9e-18  Score=126.99  Aligned_cols=115  Identities=17%  Similarity=0.207  Sum_probs=96.2

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +.+++|+|||||||||++++++|++.| .+.+|++++|++....                     .....++.+..+|+.
T Consensus        12 m~~k~IlItGaTG~iG~~l~~~Ll~~g-~~~~v~~~~R~~~~~~---------------------~~~~~~i~~~~~D~~   69 (232)
T d2bkaa1          12 MQNKSVFILGASGETGRVLLKEILEQG-LFSKVTLIGRRKLTFD---------------------EEAYKNVNQEVVDFE   69 (232)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHT-CCSEEEEEESSCCCCC---------------------SGGGGGCEEEECCGG
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCC-CCCEEEEEecChhhhc---------------------ccccceeeeeeeccc
Confidence            456899999999999999999999998 3458999999764321                     112356788888998


Q ss_pred             CCCCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        114 SEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      +.      +++..+++++|++||++|......+..++.++|+.++.+++++|.+. ++++|||+
T Consensus        70 ~~------~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~-~v~~fi~~  126 (232)
T d2bkaa1          70 KL------DDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAG-GCKHFNLL  126 (232)
T ss_dssp             GG------GGGGGGGSSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEE
T ss_pred             cc------ccccccccccccccccccccccccchhhhhhhcccccceeeeccccc-CccccccC
Confidence            87      67888889999999999987666677788999999999999999998 89999984

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.75  E-value=1.3e-18  Score=135.62  Aligned_cols=123  Identities=15%  Similarity=0.181  Sum_probs=96.0

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      ..+||+||||||+||||+++++.|++.|   ++|++++|+...   ...+........          ......++.+|+
T Consensus         8 ~~~gk~VlVTG~sGfIGs~l~~~Ll~~G---~~V~~~vR~~~~---~~~~~~~~~~~~----------~~~~~~~~~~Dl   71 (342)
T d1y1pa1           8 LPEGSLVLVTGANGFVASHVVEQLLEHG---YKVRGTARSASK---LANLQKRWDAKY----------PGRFETAVVEDM   71 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSHHH---HHHHHHHHHHHS----------TTTEEEEECSCT
T ss_pred             CCCcCEEEEECCCCHHHHHHHHHHHHCc---CEEEEEeCCchh---HHHHHHhhhccc----------cccccEEEeccc
Confidence            3468999999999999999999999999   589999986421   122222211100          112345677999


Q ss_pred             CCCCCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        113 ESEHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      .+.      +.+..++.++|+++|+|+......+...++++|+.++.+++++|.+.+++++|||+
T Consensus        72 ~~~------~~~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~  130 (342)
T d1y1pa1          72 LKQ------GAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLT  130 (342)
T ss_dssp             TST------TTTTTTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEE
T ss_pred             cch------hhhhhhcccchhhhhhcccccccccccccccchhhhHHHHHHhhhccccccccccc
Confidence            998      56777888999999999998777777788899999999999999998689999984

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.74  E-value=9.1e-18  Score=129.41  Aligned_cols=114  Identities=15%  Similarity=0.217  Sum_probs=88.8

Q ss_pred             eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCC
Q psy17489         38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHL  117 (177)
Q Consensus        38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~  117 (177)
                      +||||||+||||+++++.|+++|   ++|+++++-.... ..+.+....              ...+++++.+|+++.  
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g---~~V~~id~~~~~~-~~~~~~~~~--------------~~~~~~~i~~Di~~~--   61 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQG---IDLIVFDNLSRKG-ATDNLHWLS--------------SLGNFEFVHGDIRNK--   61 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCCSTT-HHHHHHHHH--------------TTCCCEEEECCTTCH--
T ss_pred             EEEEECCCcHHHHHHHHHHHHCc---CEEEEEECCCccc-chhHHHHhh--------------ccCCcEEEEcccCCH--
Confidence            69999999999999999999999   5888887533222 122233221              236899999999998  


Q ss_pred             CCCHHHHHHHhcC--CcEEEEcCcccCchH---HHHHHHHHhHHHHHHHHHHHHhcCCCCCcee
Q psy17489        118 GLSEDSEQLIKSK--VNIIFHCAASLRFDE---ALQKAIRANLYATKQMLNLAKECVNLKRFCE  176 (177)
Q Consensus       118 ~~~~~~~~~~~~~--~d~vi~~aa~~~~~~---~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~  176 (177)
                          +.+..++++  +|+|||+|+......   +....+++|+.|+.+++++|.+. +++++|+
T Consensus        62 ----~~l~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-~~~~~i~  120 (338)
T d1orra_          62 ----NDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQY-NSNCNII  120 (338)
T ss_dssp             ----HHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEE
T ss_pred             ----HHHHHHHHhcCCceEEeecccccccccccChHHHHHHHHHHHHHHHHhhhcc-ccccccc
Confidence                788888874  699999999876533   34678899999999999999998 7776665

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.73  E-value=4.2e-18  Score=133.47  Aligned_cols=122  Identities=18%  Similarity=0.172  Sum_probs=86.6

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |++|||||+||||++|++.|++.|   .+|++++|....... .++.+...         +......++.++.+|++|. 
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g---~~V~~~~r~~~~~~~-~~~~~~~~---------~~~~~~~~~~~~~~Dl~d~-   67 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKG---YEVHGIKRRASSFNT-ERVDHIYQ---------DPHTCNPKFHLHYGDLSDT-   67 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT---CEEEEECC-------------------------------CCEEECCCCSSCH-
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCc---CEEEEEECCCcccch-hhHHHHHh---------hhhhcCCCeEEEEeecCCH-
Confidence            789999999999999999999999   589999986432111 11221111         0111346899999999998 


Q ss_pred             CCCCHHHHHHHhcC--CcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhcC--CCCCceeC
Q psy17489        117 LGLSEDSEQLIKSK--VNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKECV--NLKRFCEL  177 (177)
Q Consensus       117 ~~~~~~~~~~~~~~--~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~~--~~~~~v~v  177 (177)
                           +.+..++++  +|+|||+||..+.   .++...++++|+.++.+++++|++.+  +.+||||+
T Consensus        68 -----~~~~~~~~~~~~d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~  130 (357)
T d1db3a_          68 -----SNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQA  130 (357)
T ss_dssp             -----HHHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEE
T ss_pred             -----HHHHHHHhccCCCEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEE
Confidence                 788998874  5999999998653   34556688999999999999999871  33468873

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.73  E-value=2.5e-17  Score=128.88  Aligned_cols=114  Identities=16%  Similarity=0.113  Sum_probs=92.8

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      +.++|+||||||+||||++|+..|+++|   +.|+++++.+....                     ........+..+|+
T Consensus        12 ~~~nMKILVTGgsGfIGs~lv~~L~~~g---~~V~~~d~~~~~~~---------------------~~~~~~~~~~~~D~   67 (363)
T d2c5aa1          12 PSENLKISITGAGGFIASHIARRLKHEG---HYVIASDWKKNEHM---------------------TEDMFCDEFHLVDL   67 (363)
T ss_dssp             TTSCCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCCSSS---------------------CGGGTCSEEEECCT
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCc---CEEEEEeCCCccch---------------------hhhcccCcEEEeec
Confidence            4478899999999999999999999999   58898887653321                     11224567888999


Q ss_pred             CCCCCCCCHHHHHHHhcCCcEEEEcCcccCc----hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        113 ESEHLGLSEDSEQLIKSKVNIIFHCAASLRF----DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~----~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      .+.      +.+..+++++|.|||+|+....    .......+..|+.++.+++++|++. +++||||+
T Consensus        68 ~~~------~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~-~vk~~i~~  129 (363)
T d2c5aa1          68 RVM------ENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARIN-GIKRFFYA  129 (363)
T ss_dssp             TSH------HHHHHHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEE
T ss_pred             hhH------HHHHHHhhcCCeEeecccccccccccccccccccccccchhhHHHHhHHhh-Cccccccc
Confidence            987      7788888999999999987654    3445567899999999999999998 99999974

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.71  E-value=1.1e-16  Score=126.55  Aligned_cols=117  Identities=14%  Similarity=0.097  Sum_probs=85.7

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEe-------------C-CCCCChHHHHHHHHhhhhhhcccccCccc
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR-------------D-KKGSSPEERVKNMLNSVIFDRLNKEVPDF  101 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r-------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  101 (177)
                      ||+||||||+||||+++++.|++.|   +.|++++.             + .......+.+......            .
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g---~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~   65 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKN---YEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKAL------------T   65 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHH------------H
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCc---CEEEEEecCCcccccccccccccccccchHHHHHHHHhh------------c
Confidence            7899999999999999999999999   58888862             0 1111222222221110            2


Q ss_pred             CCCeEEEeCCCCCCCCCCCHHHHHHHhc--CCcEEEEcCcccCch------HHHHHHHHHhHHHHHHHHHHHHhcCCCCC
Q psy17489        102 RSKIQVIPSNLESEHLGLSEDSEQLIKS--KVNIIFHCAASLRFD------EALQKAIRANLYATKQMLNLAKECVNLKR  173 (177)
Q Consensus       102 ~~~v~~~~~D~~~~~~~~~~~~~~~~~~--~~d~vi~~aa~~~~~------~~~~~~~~~nv~~~~~ll~~~~~~~~~~~  173 (177)
                      ..+++++.+|++|.      +.+..+++  ++|+|||+||.....      .....++++|+.++.+++++|++. ++++
T Consensus        66 ~~~i~~~~~Dl~d~------~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~-~~~~  138 (393)
T d1i24a_          66 GKSIELYVGDICDF------EFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF-GEEC  138 (393)
T ss_dssp             CCCCEEEESCTTSH------HHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH-CTTC
T ss_pred             CCCcEEEEccCCCH------HHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHh-cccc
Confidence            35799999999998      78888887  569999999976532      233457899999999999999998 5554


Q ss_pred             c
Q psy17489        174 F  174 (177)
Q Consensus       174 ~  174 (177)
                      +
T Consensus       139 ~  139 (393)
T d1i24a_         139 H  139 (393)
T ss_dssp             E
T ss_pred             c
Confidence            3

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=3.4e-17  Score=118.93  Aligned_cols=108  Identities=9%  Similarity=0.079  Sum_probs=87.7

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      .+|+|+||||+|+||++++++|+++|   ++|+++.|++....                     .....+++++.+|+.+
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g---~~V~~~~R~~~~~~---------------------~~~~~~~~~~~gD~~d   57 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAG---YEVTVLVRDSSRLP---------------------SEGPRPAHVVVGDVLQ   57 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCGGGSC---------------------SSSCCCSEEEESCTTS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCc---CEEEEEEcChhhcc---------------------cccccccccccccccc
Confidence            57899999999999999999999999   58999999753210                     0122568999999999


Q ss_pred             CCCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        115 EHLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      .      +.+.++++++|+|||++|.......    .+.+..++.+++++++++ +++|||++
T Consensus        58 ~------~~l~~al~~~d~vi~~~g~~~~~~~----~~~~~~~~~~l~~aa~~~-~v~r~i~~  109 (205)
T d1hdoa_          58 A------ADVDKTVAGQDAVIVLLGTRNDLSP----TTVMSEGARNIVAAMKAH-GVDKVVAC  109 (205)
T ss_dssp             H------HHHHHHHTTCSEEEECCCCTTCCSC----CCHHHHHHHHHHHHHHHH-TCCEEEEE
T ss_pred             h------hhHHHHhcCCCEEEEEeccCCchhh----hhhhHHHHHHHHHHHHhc-CCCeEEEE
Confidence            8      8899999999999999987432222    245677899999999998 99999974

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=1.5e-16  Score=123.62  Aligned_cols=119  Identities=19%  Similarity=0.230  Sum_probs=89.2

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC----CCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK----GSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      |+||||||+||||++|+++|++.|   ..|+++++...    .....+........            ...++.++.+|+
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g---~~V~~ld~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~Dl   67 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAG---YLPVVIDNFHNAFRGGGSLPESLRRVQEL------------TGRSVEFEEMDI   67 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTT---CCEEEEECSSSSCBCSSSSBHHHHHHHHH------------HTCCCEEEECCT
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCc---CEEEEEECCCccccccccchHHHHHHHHh------------cCCCcEEEEeec
Confidence            689999999999999999999999   58888875211    11111222211110            136899999999


Q ss_pred             CCCCCCCCHHHHHHHhc--CCcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        113 ESEHLGLSEDSEQLIKS--KVNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~--~~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      +|.      +.+..++.  .++.++|+||..+..   .++...+++|+.++.+++++++++ ++++|+|+
T Consensus        68 ~d~------~~l~~~~~~~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~-~v~~~i~~  130 (346)
T d1ek6a_          68 LDQ------GALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH-GVKNLVFS  130 (346)
T ss_dssp             TCH------HHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEE
T ss_pred             ccc------ccccccccccccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhc-Cccccccc
Confidence            998      77877765  467899999986643   234567899999999999999999 99999873

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.67  E-value=2e-16  Score=122.68  Aligned_cols=110  Identities=13%  Similarity=0.170  Sum_probs=84.5

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+||||||+||||++++++|++.|+  ..|+++++......      +              ....++++++.+|+++..
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~--~~V~~ld~~~~~~~------~--------------~~~~~~~~~i~~Di~~~~   58 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDH--YEVYGLDIGSDAIS------R--------------FLNHPHFHFVEGDISIHS   58 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTT--CEEEEEESCCGGGG------G--------------GTTCTTEEEEECCTTTCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC--CEEEEEeCCCcchh------h--------------hccCCCeEEEECccCChH
Confidence            5899999999999999999999984  58999987542110      0              002368999999999873


Q ss_pred             CCCCHHHHHHHhcCCcEEEEcCcccCchH---HHHHHHHHhHHHHHHHHHHHHhcCCCCCc
Q psy17489        117 LGLSEDSEQLIKSKVNIIFHCAASLRFDE---ALQKAIRANLYATKQMLNLAKECVNLKRF  174 (177)
Q Consensus       117 ~~~~~~~~~~~~~~~d~vi~~aa~~~~~~---~~~~~~~~nv~~~~~ll~~~~~~~~~~~~  174 (177)
                           +..+.+.+++|+|||+|+......   .....+++|+.++.+++++|.+. +++.+
T Consensus        59 -----~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~-~~~~~  113 (342)
T d2blla1          59 -----EWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-RKRII  113 (342)
T ss_dssp             -----HHHHHHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-TCEEE
T ss_pred             -----HHHHHHHhCCCccccccccccccccccCCccccccccccccccccccccc-ccccc
Confidence                 334446678999999999876433   33467899999999999999998 66544

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.67  E-value=7.6e-17  Score=126.51  Aligned_cols=118  Identities=19%  Similarity=0.298  Sum_probs=86.4

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+||||||+||||++|+++|++.|+  ..|+++++....... ..+..              ....+++.++.+|++|. 
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~--~vv~~~d~~~~~~~~-~~~~~--------------~~~~~~~~~~~~Dl~d~-   62 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQ--DTVVNIDKLTYAGNL-ESLSD--------------ISESNRYNFEHADICDS-   62 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCS--CEEEEEECCCTTCCG-GGGTT--------------TTTCTTEEEEECCTTCH-
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC--CEEEEEeCCCccccH-HHHHh--------------hhhcCCcEEEEccCCCH-
Confidence            5899999999999999999999995  346666654322211 11111              01236899999999998 


Q ss_pred             CCCCHHHHHHHhc--CCcEEEEcCcccCchH---HHHHHHHHhHHHHHHHHHHHHhcC--------CCCCceeC
Q psy17489        117 LGLSEDSEQLIKS--KVNIIFHCAASLRFDE---ALQKAIRANLYATKQMLNLAKECV--------NLKRFCEL  177 (177)
Q Consensus       117 ~~~~~~~~~~~~~--~~d~vi~~aa~~~~~~---~~~~~~~~nv~~~~~ll~~~~~~~--------~~~~~v~v  177 (177)
                           ..+..+++  ++|+|||+||..+...   ++..++++|+.++.+++++|++.+        ++++|||+
T Consensus        63 -----~~l~~~~~~~~~d~VihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~  131 (361)
T d1kewa_          63 -----AEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHI  131 (361)
T ss_dssp             -----HHHHHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEE
T ss_pred             -----HHHHHHHHhCCCCEEEECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEe
Confidence                 77888776  5899999999865432   345688999999999999998751        24477763

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.66  E-value=4.3e-16  Score=121.12  Aligned_cols=117  Identities=16%  Similarity=0.152  Sum_probs=90.1

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      .+||+||||||+||||+++++.|++.|   +.|++++|+......  .+...              ....+++++.+|++
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g---~~V~~~~r~~~~~~~--~~~~~--------------~~~~~i~~~~~Dl~   66 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMG---ATVKGYSLTAPTVPS--LFETA--------------RVADGMQSEIGDIR   66 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCSSSSC--HHHHT--------------TTTTTSEEEECCTT
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCCCccHH--HHhhh--------------hcccCCeEEEeecc
Confidence            578999999999999999999999999   589999997643221  11110              01257899999999


Q ss_pred             CCCCCCCHHHHHHHhc--CCcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhcCCCCCce
Q psy17489        114 SEHLGLSEDSEQLIKS--KVNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKECVNLKRFC  175 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~--~~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v  175 (177)
                      |+      +.+.++++  .+++++|+|+.....   ..+..++++|+.++.++++++++.+..+.++
T Consensus        67 d~------~~l~~~~~~~~~~~v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~  127 (356)
T d1rkxa_          67 DQ------NKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVV  127 (356)
T ss_dssp             CH------HHHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEE
T ss_pred             Ch------HhhhhhhhhchhhhhhhhhccccccccccCCccccccccccchhhhhhhhccccccccc
Confidence            98      77877776  579999999986542   3445688999999999999999873444444

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.65  E-value=1.5e-15  Score=113.45  Aligned_cols=119  Identities=12%  Similarity=0.156  Sum_probs=90.4

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      +.++||+++||||+++||.++++.|++.|   ++|++.+|++.     +........            ...++..+.+|
T Consensus         1 qrL~gKvalVTGas~GIG~aia~~la~~G---a~V~~~~~~~~-----~~~~~~~~~------------~g~~~~~~~~D   60 (247)
T d2ew8a1           1 QRLKDKLAVITGGANGIGRAIAERFAVEG---ADIAIADLVPA-----PEAEAAIRN------------LGRRVLTVKCD   60 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSCC-----HHHHHHHHH------------TTCCEEEEECC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCch-----HHHHHHHHH------------cCCcEEEEEee
Confidence            35789999999999999999999999999   68999998753     122222111            23678899999


Q ss_pred             CCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCc
Q psy17489        112 LESEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VNLKRF  174 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~  174 (177)
                      ++++      ++++.++       .++|++|||||....       .++|+..+++|+.++..+.+.+.+.   .+-.++
T Consensus        61 vs~~------~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~I  134 (247)
T d2ew8a1          61 VSQP------GDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRI  134 (247)
T ss_dssp             TTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred             CCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCc
Confidence            9998      5665553       479999999998542       4789999999999999998876442   133455


Q ss_pred             ee
Q psy17489        175 CE  176 (177)
Q Consensus       175 v~  176 (177)
                      |+
T Consensus       135 v~  136 (247)
T d2ew8a1         135 IN  136 (247)
T ss_dssp             EE
T ss_pred             cc
Confidence            54

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.65  E-value=8.9e-16  Score=114.45  Aligned_cols=118  Identities=12%  Similarity=0.070  Sum_probs=89.7

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      ..++||+++||||+++||.++++.|++.|   ++|++.+|++      ++++....+            ...++.++++|
T Consensus         2 G~L~gK~alITGas~GIG~aia~~la~~G---~~V~~~~r~~------~~~~~~~~~------------~~~~~~~~~~D   60 (244)
T d1nffa_           2 GRLTGKVALVSGGARGMGASHVRAMVAEG---AKVVFGDILD------EEGKAMAAE------------LADAARYVHLD   60 (244)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHHH------------TGGGEEEEECC
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCH------HHHHHHHHH------------hhCcceEEEee
Confidence            35789999999999999999999999999   6899999865      333333221            12467889999


Q ss_pred             CCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCc
Q psy17489        112 LESEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VNLKRF  174 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~  174 (177)
                      ++++      ++++.++       .++|++|||||....       .++|++.+++|+.+++.+.+.+...   .+-.++
T Consensus        61 v~~~------~~v~~~~~~~~~~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~I  134 (244)
T d1nffa_          61 VTQP------AQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSI  134 (244)
T ss_dssp             TTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred             cCCH------HHHHHHHHHHHHHhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceE
Confidence            9998      5555544       368999999997542       4789999999999999998876432   133456


Q ss_pred             ee
Q psy17489        175 CE  176 (177)
Q Consensus       175 v~  176 (177)
                      |+
T Consensus       135 i~  136 (244)
T d1nffa_         135 IN  136 (244)
T ss_dssp             EE
T ss_pred             Ee
Confidence            54

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.64  E-value=1.2e-15  Score=113.37  Aligned_cols=110  Identities=17%  Similarity=0.207  Sum_probs=87.5

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .++||+++||||+++||.++++.|++.|   ++|++.+|++...                          .++..+.+|+
T Consensus         4 sl~gK~~lITGas~GIG~aia~~la~~G---a~V~~~~r~~~~~--------------------------~~~~~~~~Dv   54 (237)
T d1uzma1           4 PFVSRSVLVTGGNRGIGLAIAQRLAADG---HKVAVTHRGSGAP--------------------------KGLFGVEVDV   54 (237)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSSCCC--------------------------TTSEEEECCT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCcchh--------------------------cCceEEEEec
Confidence            4689999999999999999999999999   6999999976432                          4677899999


Q ss_pred             CCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCce
Q psy17489        113 ESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFC  175 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v  175 (177)
                      +++      +++++++       .++|++|||||...       ..++|+..+++|+.++..+.+.+...   .+..++|
T Consensus        55 ~~~------~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv  128 (237)
T d1uzma1          55 TDS------DAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMI  128 (237)
T ss_dssp             TCH------HHHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred             CCH------HHHHHHHHHHHHhcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceE
Confidence            998      5555543       37899999999753       24788999999999999888765432   1445666


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       129 ~i  130 (237)
T d1uzma1         129 FI  130 (237)
T ss_dssp             EE
T ss_pred             EE
Confidence            53

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.64  E-value=1.2e-15  Score=118.22  Aligned_cols=122  Identities=19%  Similarity=0.226  Sum_probs=93.4

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCC-hHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSS-PEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      +.|++|||||+||||++|+++|++.|   ++|++++|...... ..+.+......           ....++.++.+|..
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g---~~V~~~d~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~d~~   80 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLD---QKVVGLDNFATGHQRNLDEVRSLVSE-----------KQWSNFKFIQGDIR   80 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCHHHHHHHHHHSCH-----------HHHTTEEEEECCTT
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCc---CEEEEEECCCCcchhhHHHHHHhhhh-----------cccCCeeEEeeccc
Confidence            56899999999999999999999999   58999987543221 11222222111           12357899999999


Q ss_pred             CCCCCCCHHHHHHHhcCCcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        114 SEHLGLSEDSEQLIKSKVNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      +.      ..........+.++|+++....   .+++...+++|+.++.+++++|.++ ++++|||.
T Consensus        81 d~------~~~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~-~~~~~i~~  140 (341)
T d1sb8a_          81 NL------DDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA-KVQSFTYA  140 (341)
T ss_dssp             SH------HHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEE
T ss_pred             cc------cccccccccccccccccccccccccccCccchhheeehhHHHHHHHHHhc-CCceEEEc
Confidence            87      6677777789999999997654   3445568899999999999999998 89999984

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.64  E-value=1e-15  Score=117.41  Aligned_cols=116  Identities=18%  Similarity=0.141  Sum_probs=88.7

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+||||||+||||+++++.|++.|   ++|++++|....... .++.++.              ..+++.++.+|+.|. 
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g---~~V~~~~r~~~~~~~-~~l~~~~--------------~~~~~~~~~~Dl~d~-   61 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKG---YRVHGLVARRSSDTR-WRLRELG--------------IEGDIQYEDGDMADA-   61 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCCSSCCC-HHHHHTT--------------CGGGEEEEECCTTCH-
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCc---CEEEEEECCCCcccH-HHHHHhc--------------ccCCcEEEEccccCh-
Confidence            689999999999999999999999   589999987643322 3333321              125789999999998 


Q ss_pred             CCCCHHHHHHHhc--CCcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhcCCCCCcee
Q psy17489        117 LGLSEDSEQLIKS--KVNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKECVNLKRFCE  176 (177)
Q Consensus       117 ~~~~~~~~~~~~~--~~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~  176 (177)
                           ..+...+.  ..++++|+|+.....   .....+++.|+.++.+++++|++++..++|++
T Consensus        62 -----~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~  121 (321)
T d1rpna_          62 -----CSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQ  121 (321)
T ss_dssp             -----HHHHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEE
T ss_pred             -----HHhhhhhccccccccccccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCccccc
Confidence                 67777665  467899998876543   34566889999999999999999833445554

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=2e-15  Score=112.58  Aligned_cols=121  Identities=12%  Similarity=0.126  Sum_probs=90.3

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      ..++||+++||||+++||.++++.|++.|   .+|++.+|+.      +++++..++         ..+...++..+.+|
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G---~~V~l~~r~~------~~l~~~~~~---------~~~~~~~~~~~~~D   64 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLK---SKLVLWDINK------HGLEETAAK---------CKGLGAKVHTFVVD   64 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHHH---------HHHTTCCEEEEECC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCH------HHHHHHHHH---------HHhcCCcEEEEEee
Confidence            34789999999999999999999999999   6999999975      223322221         11134678999999


Q ss_pred             CCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCc
Q psy17489        112 LESEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VNLKRF  174 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~  174 (177)
                      +++.      ++++.++       .++|++|||||....       .+.|+..+++|+.++.++.+.+..+   .+-.++
T Consensus        65 vs~~------~~v~~~~~~i~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~I  138 (244)
T d1yb1a_          65 CSNR------EDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHI  138 (244)
T ss_dssp             TTCH------HHHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEE
T ss_pred             CCCH------HHHHHHHHHHHHHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceE
Confidence            9998      5555543       368999999997532       4567789999999999998876432   144456


Q ss_pred             ee
Q psy17489        175 CE  176 (177)
Q Consensus       175 v~  176 (177)
                      |+
T Consensus       139 v~  140 (244)
T d1yb1a_         139 VT  140 (244)
T ss_dssp             EE
T ss_pred             EE
Confidence            64

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.63  E-value=1.8e-15  Score=113.28  Aligned_cols=111  Identities=16%  Similarity=0.222  Sum_probs=85.5

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      ++||+++||||+++||.++++.|++.|   ++|++.+|+.+.  ..+...++...            ...++.++.+|++
T Consensus         3 l~gK~~lITGas~GIG~aia~~la~~G---a~V~i~~r~~~~--~~~~~~~l~~~------------~g~~~~~~~~Dv~   65 (251)
T d1vl8a_           3 LRGRVALVTGGSRGLGFGIAQGLAEAG---CSVVVASRNLEE--ASEAAQKLTEK------------YGVETMAFRCDVS   65 (251)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH--HHHHHHHHHHH------------HCCCEEEEECCTT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHH--HHHHHHHHHHH------------hCCcEEEEEccCC
Confidence            689999999999999999999999999   689999986521  11222222111            2357888999999


Q ss_pred             CCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      ++      ++++.++       .++|++|||||...       ..++|+..+++|+.+++.+.+.+.+
T Consensus        66 ~~------~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~  127 (251)
T d1vl8a_          66 NY------EEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFS  127 (251)
T ss_dssp             CH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhh
Confidence            98      5555544       37999999999753       2578889999999999999988754

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.63  E-value=1.8e-15  Score=113.46  Aligned_cols=117  Identities=11%  Similarity=0.046  Sum_probs=90.2

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .++||+++||||+++||.++++.|++.|   ++|++.+|++      +++.+..++            ...++.++++|+
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~G---a~V~~~~r~~------~~~~~~~~~------------~~~~~~~~~~Dv   60 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAG---ARVVLADVLD------EEGAATARE------------LGDAARYQHLDV   60 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHHT------------TGGGEEEEECCT
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCC---CEEEEEECCH------HHHHHHHHH------------hCCceEEEEccc
Confidence            3689999999999999999999999999   6899999865      333333321            125688999999


Q ss_pred             CCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCce
Q psy17489        113 ESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFC  175 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v  175 (177)
                      +++      ++++.++       .++|++|||||...       ..++|+..+++|+.++..+.+.+.+.   .+-.++|
T Consensus        61 ~~~------~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II  134 (254)
T d1hdca_          61 TIE------EDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIV  134 (254)
T ss_dssp             TCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred             CCH------HHHHHHHHHHHHHcCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeec
Confidence            998      5666554       37899999999754       24778899999999999998877432   1445666


Q ss_pred             e
Q psy17489        176 E  176 (177)
Q Consensus       176 ~  176 (177)
                      +
T Consensus       135 ~  135 (254)
T d1hdca_         135 N  135 (254)
T ss_dssp             E
T ss_pred             c
Confidence            5

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.63  E-value=1.9e-15  Score=113.42  Aligned_cols=116  Identities=14%  Similarity=0.145  Sum_probs=89.2

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      ++||+++||||+++||.++++.|++.|   ++|++.+|+.      +.+++...+            ...++..+.+|++
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~G---a~V~~~~r~~------~~l~~~~~~------------~~~~~~~~~~Dvt   61 (256)
T d1k2wa_           3 LDGKTALITGSARGIGRAFAEAYVREG---ARVAIADINL------EAARATAAE------------IGPAACAIALDVT   61 (256)
T ss_dssp             TTTEEEEEETCSSHHHHHHHHHHHHTT---EEEEEEESCH------HHHHHHHHH------------HCTTEEEEECCTT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCH------HHHHHHHHH------------hCCceEEEEeeCC
Confidence            689999999999999999999999999   6999999864      333333322            1357889999999


Q ss_pred             CCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh----cCCCCCce
Q psy17489        114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE----CVNLKRFC  175 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v  175 (177)
                      ++      ++++.++       .++|++|||||...       ..++|+..+++|+.++..+.+.+..    .++-.++|
T Consensus        62 ~~------~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv  135 (256)
T d1k2wa_          62 DQ------ASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKII  135 (256)
T ss_dssp             CH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEE
T ss_pred             CH------HHHHHHHHHHHHHhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccc
Confidence            98      5666554       37899999999754       2477889999999999999886432    12334566


Q ss_pred             e
Q psy17489        176 E  176 (177)
Q Consensus       176 ~  176 (177)
                      +
T Consensus       136 ~  136 (256)
T d1k2wa_         136 N  136 (256)
T ss_dssp             E
T ss_pred             c
Confidence            5

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.63  E-value=3.4e-15  Score=111.11  Aligned_cols=105  Identities=14%  Similarity=0.169  Sum_probs=84.8

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      ++||+++||||+++||.++++.|++.|   ++|++.+|++      +.+++..+.              -+..++.+|++
T Consensus         3 L~gK~~lITGas~GIG~aia~~l~~~G---~~V~~~~r~~------~~l~~~~~~--------------~~~~~~~~Dv~   59 (242)
T d1ulsa_           3 LKDKAVLITGAAHGIGRATLELFAKEG---ARLVACDIEE------GPLREAAEA--------------VGAHPVVMDVA   59 (242)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHHT--------------TTCEEEECCTT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCH------HHHHHHHHH--------------cCCeEEEEecC
Confidence            689999999999999999999999999   6899999864      344443321              35678999999


Q ss_pred             CCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      ++      +++++++       .++|++|||||...       ..++|+..+++|+.++..+.+.+.+
T Consensus        60 ~~------~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~  121 (242)
T d1ulsa_          60 DP------ASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASE  121 (242)
T ss_dssp             CH------HHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CH------HHHHHHHHHHHHhcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccc
Confidence            98      5665554       37899999999753       2477899999999999999988765

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=3.4e-15  Score=111.23  Aligned_cols=108  Identities=18%  Similarity=0.251  Sum_probs=87.1

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      ..++||+++||||+++||.++++.|++.|   ++|++.+|++      +++.+...+             ..++..+.+|
T Consensus         3 ~~L~GK~~lITGas~GIG~aia~~la~~G---~~V~~~~r~~------~~l~~~~~~-------------~~~~~~~~~D   60 (244)
T d1pr9a_           3 LFLAGRRVLVTGAGKGIGRGTVQALHATG---ARVVAVSRTQ------ADLDSLVRE-------------CPGIEPVCVD   60 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHHH-------------STTCEEEECC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEECCH------HHHHHHHHh-------------cCCCeEEEEe
Confidence            35799999999999999999999999999   6899999864      334433321             2467889999


Q ss_pred             CCCCCCCCCHHHHHHHhc---CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        112 LESEHLGLSEDSEQLIKS---KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~---~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      +++.      +.++++++   ++|++|||||....       .++|+..+++|+.++..+.+.+.+
T Consensus        61 v~d~------~~v~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~  120 (244)
T d1pr9a_          61 LGDW------EATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVAR  120 (244)
T ss_dssp             TTCH------HHHHHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCCH------HHHHHHHHHhCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhh
Confidence            9998      67777765   68999999997542       478889999999999999887643

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=3.1e-15  Score=111.85  Aligned_cols=108  Identities=17%  Similarity=0.223  Sum_probs=85.3

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      ..++||+++||||+++||.++++.|++.|   ++|++.+|++      +.+++..+             ...++.++.+|
T Consensus         2 ~rl~GK~alITGas~GIG~aia~~la~~G---a~V~i~~r~~------~~~~~~~~-------------~~~~~~~~~~D   59 (250)
T d1ydea1           2 TRYAGKVVVVTGGGRGIGAGIVRAFVNSG---ARVVICDKDE------SGGRALEQ-------------ELPGAVFILCD   59 (250)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHH-------------HCTTEEEEECC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCH------HHHHHHHH-------------hcCCCeEEEcc
Confidence            35789999999999999999999999999   6899999864      33333322             12467889999


Q ss_pred             CCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        112 LESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      ++++      +++++++       .++|++|||||...        ..+.|+..+++|+.+++++.+.+.+
T Consensus        60 vs~~------~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p  124 (250)
T d1ydea1          60 VTQE------DDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALP  124 (250)
T ss_dssp             TTSH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCCH------HHHHHHHHHHHHhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhH
Confidence            9998      5666654       36899999999642        1367889999999999999887654

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.63  E-value=9.5e-16  Score=115.26  Aligned_cols=122  Identities=16%  Similarity=0.124  Sum_probs=89.5

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      +++||+++||||+++||.++++.|++.|   ++|++.+|++..  ..+.+.+.+..           ....++.++.+|+
T Consensus         1 ~L~gK~alITGas~GIG~aiA~~la~~G---a~V~~~~r~~~~--~~~~~~~~~~~-----------~~g~~~~~~~~Dv   64 (260)
T d1x1ta1           1 MLKGKVAVVTGSTSGIGLGIATALAAQG---ADIVLNGFGDAA--EIEKVRAGLAA-----------QHGVKVLYDGADL   64 (260)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEECCSCHH--HHHHHHHHHHH-----------HHTSCEEEECCCT
T ss_pred             CCCcCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCcHH--HHHHHHHHHHH-----------hcCCcEEEEECCC
Confidence            4789999999999999999999999999   689999987521  11222221110           0235788999999


Q ss_pred             CCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCce
Q psy17489        113 ESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFC  175 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v  175 (177)
                      +++      ++++.++       .++|++|||||...       ..++|+..+++|+.++.++.+.+.+.   .+-.++|
T Consensus        65 ~~~------~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv  138 (260)
T d1x1ta1          65 SKG------EAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRII  138 (260)
T ss_dssp             TSH------HHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred             CCH------HHHHHHHHHHHHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEe
Confidence            998      5666654       36999999999753       24778899999999999998876432   1334555


Q ss_pred             e
Q psy17489        176 E  176 (177)
Q Consensus       176 ~  176 (177)
                      +
T Consensus       139 ~  139 (260)
T d1x1ta1         139 N  139 (260)
T ss_dssp             E
T ss_pred             e
Confidence            4

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=1.2e-15  Score=118.32  Aligned_cols=123  Identities=19%  Similarity=0.243  Sum_probs=86.3

Q ss_pred             ceE-EEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         37 GQI-LVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        37 ~~v-lVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      |+| |||||+||||+++++.|++.|   +.|++++|....... .++.++...        .......++.++.+|++|.
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g---~~V~~i~r~~~~~~~-~~~~~~~~~--------~~~~~~~~~~~~~~Dl~d~   68 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKG---YEVHGIVRRSSSFNT-GRIEHLYKN--------PQAHIEGNMKLHYGDLTDS   68 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCCSSCCC-TTTGGGC-----------------CEEEEECCTTCH
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCc---CEEEEEECCCcccch-hhHHHHhhc--------hhhhccCCcEEEEeecCCc
Confidence            567 999999999999999999999   599999996532111 000000000        0001225789999999998


Q ss_pred             CCCCCHHHHHHHhc--CCcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhcC--CCCCceeC
Q psy17489        116 HLGLSEDSEQLIKS--KVNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKECV--NLKRFCEL  177 (177)
Q Consensus       116 ~~~~~~~~~~~~~~--~~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~~--~~~~~v~v  177 (177)
                            +.+..++.  +.+.++|+++.....   .....++++|+.++.++++++++++  +.++|||+
T Consensus        69 ------~~~~~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~  131 (347)
T d1t2aa_          69 ------TCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQA  131 (347)
T ss_dssp             ------HHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEE
T ss_pred             ------hhhHHHHhhcccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEe
Confidence                  77888775  578999999976643   3344568999999999999999872  23478763

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.62  E-value=4.2e-15  Score=111.63  Aligned_cols=122  Identities=14%  Similarity=0.156  Sum_probs=88.6

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      +++||+++||||+++||.++++.|++.|   ++|++.+|+.+.  .++...+....           ....++..+++|+
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~G---a~V~i~~r~~~~--l~~~~~~~~~~-----------~~~~~~~~~~~Dv   64 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEG---AKLSLVDVSSEG--LEASKAAVLET-----------APDAEVLTTVADV   64 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH--HHHHHHHHHHH-----------CTTCCEEEEECCT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHH--HHHHHHHHHhh-----------CCCCeEEEEeccC
Confidence            3689999999999999999999999999   699999987521  11111111110           0124788899999


Q ss_pred             CCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCc
Q psy17489        113 ESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRF  174 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~  174 (177)
                      +++      ++++.++       .++|++|||||...        ..++|+..+++|+.+++++.+++...   .+-.++
T Consensus        65 t~~------~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~I  138 (258)
T d1iy8a_          65 SDE------AQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMV  138 (258)
T ss_dssp             TSH------HHHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEE
T ss_pred             CCH------HHHHHHHHHHHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCC
Confidence            998      5665554       47999999999642        14678899999999999999876432   134456


Q ss_pred             ee
Q psy17489        175 CE  176 (177)
Q Consensus       175 v~  176 (177)
                      |+
T Consensus       139 i~  140 (258)
T d1iy8a_         139 VN  140 (258)
T ss_dssp             EE
T ss_pred             cc
Confidence            54

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.62  E-value=1.6e-15  Score=113.47  Aligned_cols=111  Identities=17%  Similarity=0.134  Sum_probs=86.3

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      +.++||+++||||+++||.++++.|++.|   ++|++.+|++      +.+++..+.     +    . ...++.++.+|
T Consensus         2 nrL~gK~alVTGas~GIG~aia~~la~~G---a~V~~~~r~~------~~~~~~~~~-----~----~-~~~~~~~~~~D   62 (251)
T d1zk4a1           2 NRLDGKVAIITGGTLGIGLAIATKFVEEG---AKVMITGRHS------DVGEKAAKS-----V----G-TPDQIQFFQHD   62 (251)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHHH-----H----C-CTTTEEEEECC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCH------HHHHHHHHH-----h----C-CCCcEEEEEcc
Confidence            46899999999999999999999999999   6899999864      222222211     0    0 23578899999


Q ss_pred             CCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        112 LESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      ++++      ++++.++       .++|++|||||...       ..++|+..+++|+.+++.+.+.+..
T Consensus        63 v~~~------~~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~  126 (251)
T d1zk4a1          63 SSDE------DGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQ  126 (251)
T ss_dssp             TTCH------HHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCCH------HHHHHHHHHHHHHhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHH
Confidence            9998      5555543       47899999999753       2477889999999999999888654

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.62  E-value=4.3e-15  Score=111.60  Aligned_cols=113  Identities=12%  Similarity=0.132  Sum_probs=87.1

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      ..++||+++||||+++||.++++.|++.|   ++|++.+|+...  ..+..++....            ...++.++.+|
T Consensus         5 m~l~gK~alITGas~GIG~aia~~la~~G---a~V~i~~r~~~~--~~~~~~~~~~~------------~g~~~~~~~~D   67 (260)
T d1h5qa_           5 ISFVNKTIIVTGGNRGIGLAFTRAVAAAG---ANVAVIYRSAAD--AVEVTEKVGKE------------FGVKTKAYQCD   67 (260)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTT---EEEEEEESSCTT--HHHHHHHHHHH------------HTCCEEEEECC
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHH--HHHHHHHHHHH------------hCCceEEEEcc
Confidence            35789999999999999999999999999   699999997643  22323322221            23578899999


Q ss_pred             CCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        112 LESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      ++++      ++++.++       .++|++|||||...       ..++|+..+++|+.++.++.+.+.+
T Consensus        68 v~~~------~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  131 (260)
T d1h5qa_          68 VSNT------DIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAK  131 (260)
T ss_dssp             TTCH------HHHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCCH------HHHHHHHHHHHHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcc
Confidence            9998      5665554       36899999999753       2467889999999999998876543

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.62  E-value=3.3e-15  Score=112.40  Aligned_cols=113  Identities=13%  Similarity=0.123  Sum_probs=86.2

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      ..++||+++||||+++||.++++.|++.|   ++|++.+|+...  ..+.+.+.+.+            ...++..+++|
T Consensus         3 ~dL~gK~alITGas~GIG~aia~~la~~G---~~Vv~~~r~~~~--~~~~~~~~~~~------------~g~~~~~~~~D   65 (261)
T d1geea_           3 KDLEGKVVVITGSSTGLGKSMAIRFATEK---AKVVVNYRSKED--EANSVLEEIKK------------VGGEAIAVKGD   65 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHH--HHHHHHHHHHH------------TTCEEEEEECC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCcHH--HHHHHHHHHHh------------cCCcEEEEEcc
Confidence            44789999999999999999999999999   699999987521  11222222111            23578889999


Q ss_pred             CCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        112 LESEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      ++++      ++++.++       .++|++|||||....       .++|+..+++|+.++.++.+.+.+
T Consensus        66 vt~~------~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~  129 (261)
T d1geea_          66 VTVE------SDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIK  129 (261)
T ss_dssp             TTSH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCCH------HHHHHHHHHHHHHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhh
Confidence            9998      5565554       378999999997542       477889999999999999887643

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.62  E-value=2.9e-15  Score=117.92  Aligned_cols=126  Identities=17%  Similarity=0.195  Sum_probs=88.8

Q ss_pred             CceEEEecCCcchHHHHHHHHHhh-CCCcCeEEEEEeC-------CCCCChHHHHHHHHhhhhhhcccccCcccCCCeEE
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRS-FPDIGAIYIMVRD-------KKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQV  107 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~-g~~~~~v~~~~r~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  107 (177)
                      +|+||||||+||||++|+++|++. |   +.|+++++-       ...... +.+...+....    .........++.+
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~---~~V~~~D~l~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~   73 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTN---HSVVIVDSLVGTHGKSDHVETR-ENVARKLQQSD----GPKPPWADRYAAL   73 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCC---CEEEEEECCTTTTTCCTTSCCH-HHHHHHHHHSC----SSCCTTTTCCCEE
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCC---CEEEEEecCCcccccchhhhhh-hhHHHHhhhhc----cccccccccceEE
Confidence            579999999999999999999974 5   689998741       111222 22222221100    0111112346889


Q ss_pred             EeCCCCCCCCCCCHHHHHHHhc---CCcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhcCCCCCcee
Q psy17489        108 IPSNLESEHLGLSEDSEQLIKS---KVNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKECVNLKRFCE  176 (177)
Q Consensus       108 ~~~D~~~~~~~~~~~~~~~~~~---~~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~  176 (177)
                      +.+|++|.      +.+.++++   ++|+|||+|+.....   ......+++|+.++.++++++++. +++++++
T Consensus        74 ~~~Di~d~------~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~-~~~~~~~  141 (383)
T d1gy8a_          74 EVGDVRNE------DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH-KCDKIIF  141 (383)
T ss_dssp             EESCTTCH------HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEE
T ss_pred             EECcccCH------HHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhcc-CCccccc
Confidence            99999998      67777775   679999999986542   334457899999999999999998 8888775

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=1.1e-16  Score=123.09  Aligned_cols=109  Identities=26%  Similarity=0.320  Sum_probs=79.0

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+||||||+||||+++++.|++.|   .+|+++++......  +.+..              .....++.+...|+.+. 
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g---~~V~~~d~~~~~~~--~~~~~--------------~~~~~~~d~~~~~~~~~-   61 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDG---HEVTVVDNFFTGRK--RNVEH--------------WIGHENFELINHDVVEP-   61 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCSSCCG--GGTGG--------------GTTCTTEEEEECCTTSC-
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCc---CEEEEEeCCCcCCH--HHHHH--------------hcCCCceEEEehHHHHH-
Confidence            689999999999999999999999   58898887432211  00000              00123456666666554 


Q ss_pred             CCCCHHHHHHHhcCCcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        117 LGLSEDSEQLIKSKVNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       117 ~~~~~~~~~~~~~~~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                                ++.++|+|||+||..+..   .+....+++|+.++.+++++|++. ++ ||||+
T Consensus        62 ----------~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~-~~-k~I~~  113 (312)
T d2b69a1          62 ----------LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV-GA-RLLLA  113 (312)
T ss_dssp             ----------CCCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHH-TC-EEEEE
T ss_pred             ----------HHcCCCEEEECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHc-CC-cEEEE
Confidence                      345799999999986642   345668899999999999999998 66 68873

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.62  E-value=2.4e-15  Score=112.05  Aligned_cols=117  Identities=15%  Similarity=0.181  Sum_probs=88.4

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      ++||+++||||+++||.++++.|++.|   ++|++.+|++      +.+++..+.            ...+...+.+|++
T Consensus         2 l~gK~alITGas~GIG~a~a~~l~~~G---~~Vv~~~r~~------~~l~~~~~~------------~~~~~~~~~~Dv~   60 (243)
T d1q7ba_           2 FEGKIALVTGASRGIGRAIAETLAARG---AKVIGTATSE------NGAQAISDY------------LGANGKGLMLNVT   60 (243)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESSH------HHHHHHHHH------------HGGGEEEEECCTT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEeCCH------HHHHHHHHH------------hCCCCcEEEEEec
Confidence            579999999999999999999999999   6899999865      233332221            1246788999999


Q ss_pred             CCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCcee
Q psy17489        114 SEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFCE  176 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~  176 (177)
                      ++      ++++.+++       ++|++|||||...       ..++|+..+++|+.+++.+.+.+.+.   .+-.++|+
T Consensus        61 ~~------~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~  134 (243)
T d1q7ba_          61 DP------ASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIIT  134 (243)
T ss_dssp             CH------HHHHHHHHHHHHHTCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred             CH------HHhhhhhhhhhcccCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeee
Confidence            97      55555443       6999999999753       24788899999999999999887432   13345665


Q ss_pred             C
Q psy17489        177 L  177 (177)
Q Consensus       177 v  177 (177)
                      +
T Consensus       135 i  135 (243)
T d1q7ba_         135 I  135 (243)
T ss_dssp             E
T ss_pred             e
Confidence            3

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.61  E-value=3.4e-15  Score=112.22  Aligned_cols=120  Identities=16%  Similarity=0.198  Sum_probs=89.1

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .++||+++||||+++||.++++.|++.|   ++|++.+|+++.  + +.+.+.+.            ....++..+.+|+
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~G---a~V~~~~r~~~~--l-~~~~~~~~------------~~g~~~~~~~~Dv   63 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEG---TAIALLDMNREA--L-EKAEASVR------------EKGVEARSYVCDV   63 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH--H-HHHHHHHH------------TTTSCEEEEECCT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHH--H-HHHHHHHH------------hcCCcEEEEEccC
Confidence            4789999999999999999999999999   689999986421  1 12222211            1345788999999


Q ss_pred             CCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCc
Q psy17489        113 ESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRF  174 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~  174 (177)
                      +++      ++++.++       .++|++|||||...        ..+.|+..+++|+.++..+.+++.+.   .+-.++
T Consensus        64 ~~~------~~v~~~~~~~~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~I  137 (260)
T d1zema1          64 TSE------EAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRI  137 (260)
T ss_dssp             TCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred             CCH------HHHHHHHHHHHHHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCC
Confidence            998      5555544       37999999999642        14678889999999999998876432   133455


Q ss_pred             ee
Q psy17489        175 CE  176 (177)
Q Consensus       175 v~  176 (177)
                      |+
T Consensus       138 I~  139 (260)
T d1zema1         138 VN  139 (260)
T ss_dssp             EE
T ss_pred             Ce
Confidence            54

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.61  E-value=1.3e-15  Score=118.44  Aligned_cols=116  Identities=20%  Similarity=0.396  Sum_probs=86.7

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +|+||||||+||||++|+..|++.|+.+ +|+++++....... ..+.               .....++.++.+|+.|.
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v-~v~~~d~~~~~~~~-~~~~---------------~~~~~~i~~~~~Di~d~   64 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDV-HVTVLDKLTYAGNK-ANLE---------------AILGDRVELVVGDIADA   64 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTC-EEEEEECCCTTCCG-GGTG---------------GGCSSSEEEEECCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCe-EEEEEeCCCccccH-HHHH---------------HhhcCCeEEEEccCCCH
Confidence            6899999999999999999999999654 56655542211110 0000               00235899999999998


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhcCCCCCcee
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKECVNLKRFCE  176 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~  176 (177)
                            +.+..++.+.+.++|+|+.....   .+..+.+++|+.++.++++.+... +. ++|+
T Consensus        65 ------~~~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~-~~-k~i~  120 (346)
T d1oc2a_          65 ------ELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY-DI-RFHH  120 (346)
T ss_dssp             ------HHHHHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHH-TC-EEEE
T ss_pred             ------HHHHHHHhhhhhhhhhhhcccccchhhCcccceeeehHhHHhhhhhhccc-cc-cccc
Confidence                  78899999999999999976543   334568899999999999999988 54 4554

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.61  E-value=3.4e-15  Score=111.50  Aligned_cols=114  Identities=19%  Similarity=0.232  Sum_probs=86.9

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      +++||+++||||+++||.++++.|++.|   ++|++.+|+++.   .+ +.+.                 .+..++++|+
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G---~~V~~~~~~~~~---~~-~~~~-----------------~~~~~~~~Dv   57 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREG---ALVALCDLRPEG---KE-VAEA-----------------IGGAFFQVDL   57 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSTTH---HH-HHHH-----------------HTCEEEECCT
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHH---HH-HHHH-----------------cCCeEEEEeC
Confidence            4789999999999999999999999999   699999987532   12 2111                 1346789999


Q ss_pred             CCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCce
Q psy17489        113 ESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFC  175 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v  175 (177)
                      ++.      +++++++       .++|++|||||...       ..++|+..+++|+.+++++.+++.+.   .+-.++|
T Consensus        58 ~~~------~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii  131 (248)
T d2d1ya1          58 EDE------RERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIV  131 (248)
T ss_dssp             TCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred             CCH------HHHHHHHHHHHHhcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccc
Confidence            997      5555543       47999999999753       24788999999999999998887542   1334555


Q ss_pred             e
Q psy17489        176 E  176 (177)
Q Consensus       176 ~  176 (177)
                      +
T Consensus       132 ~  132 (248)
T d2d1ya1         132 N  132 (248)
T ss_dssp             E
T ss_pred             c
Confidence            4

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.61  E-value=4.1e-15  Score=111.69  Aligned_cols=120  Identities=19%  Similarity=0.217  Sum_probs=88.5

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .++||+++||||+++||.++++.|++.|   ++|++.+|++      +++++...+         ......++.++.+|+
T Consensus         5 ~L~GK~alITGas~GIG~aia~~la~~G---a~V~~~~r~~------~~l~~~~~~---------~~~~g~~~~~~~~Dv   66 (259)
T d2ae2a_           5 NLEGCTALVTGGSRGIGYGIVEELASLG---ASVYTCSRNQ------KELNDCLTQ---------WRSKGFKVEASVCDL   66 (259)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHHH---------HHHTTCEEEEEECCT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCH------HHHHHHHHH---------HHhcCCCceEEEeeC
Confidence            3689999999999999999999999999   6899999864      222222211         011235778899999


Q ss_pred             CCCCCCCCHHHHHHHh-------c-CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCc
Q psy17489        113 ESEHLGLSEDSEQLIK-------S-KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VNLKRF  174 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~-------~-~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~  174 (177)
                      +++      ++++.++       . ++|++|||||....       .++|+..+++|+.++..+.+.+...   .+-.++
T Consensus        67 ~~~------~~v~~~~~~~~~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~I  140 (259)
T d2ae2a_          67 SSR------SERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNV  140 (259)
T ss_dssp             TCH------HHHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEE
T ss_pred             CCH------HHHHHHHHHHHHHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccc
Confidence            997      5555443       2 58999999997532       4778899999999999998876542   134456


Q ss_pred             ee
Q psy17489        175 CE  176 (177)
Q Consensus       175 v~  176 (177)
                      |+
T Consensus       141 i~  142 (259)
T d2ae2a_         141 VF  142 (259)
T ss_dssp             EE
T ss_pred             cc
Confidence            55

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.60  E-value=3.6e-15  Score=111.54  Aligned_cols=121  Identities=14%  Similarity=0.222  Sum_probs=90.2

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++|+++||||+++||.++++.|++.|   ++|++.+|++      +.+.+...+         ......++..+.+|+
T Consensus         7 ~lenKvalITGas~GIG~a~a~~la~~G---a~V~~~~r~~------~~l~~~~~~---------l~~~g~~~~~~~~Dv   68 (251)
T d2c07a1           7 CGENKVALVTGAGRGIGREIAKMLAKSV---SHVICISRTQ------KSCDSVVDE---------IKSFGYESSGYAGDV   68 (251)
T ss_dssp             CCSSCEEEEESTTSHHHHHHHHHHTTTS---SEEEEEESSH------HHHHHHHHH---------HHTTTCCEEEEECCT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEECCH------HHHHHHHHH---------HHhcCCcEEEEEccC
Confidence            4689999999999999999999999999   6899999865      222222111         111335788999999


Q ss_pred             CCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCce
Q psy17489        113 ESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFC  175 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v  175 (177)
                      +++      +++..+++       ++|++||||+...       ..++|+..+++|+.++..+.+++...   .+-.++|
T Consensus        69 t~~------~~v~~~~~~~~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IV  142 (251)
T d2c07a1          69 SKK------EEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRII  142 (251)
T ss_dssp             TCH------HHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEE
T ss_pred             CCH------HHHHHHHHHHHHhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEE
Confidence            998      56665543       7899999999753       24789999999999999998876432   1445666


Q ss_pred             eC
Q psy17489        176 EL  177 (177)
Q Consensus       176 ~v  177 (177)
                      ++
T Consensus       143 ni  144 (251)
T d2c07a1         143 NI  144 (251)
T ss_dssp             EE
T ss_pred             EE
Confidence            53

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.60  E-value=7.8e-15  Score=109.15  Aligned_cols=106  Identities=18%  Similarity=0.206  Sum_probs=86.0

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      ++||+++||||+++||.++++.|++.|   ++|++.+|++      +++.+...             ...++..+.+|++
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G---a~V~~~~r~~------~~l~~~~~-------------~~~~~~~~~~Dv~   60 (242)
T d1cyda_           3 FSGLRALVTGAGKGIGRDTVKALHASG---AKVVAVTRTN------SDLVSLAK-------------ECPGIEPVCVDLG   60 (242)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHH-------------HSTTCEEEECCTT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCH------HHHHHHHH-------------hcCCCeEEEEeCC
Confidence            689999999999999999999999999   6999999864      33333322             1246788999999


Q ss_pred             CCCCCCCHHHHHHHhc---CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        114 SEHLGLSEDSEQLIKS---KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~---~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      ++      +.++++++   ++|++|||||...       ..++|+..+++|+.++..+.+.+.+
T Consensus        61 ~~------~~v~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~  118 (242)
T d1cyda_          61 DW------DATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVAR  118 (242)
T ss_dssp             CH------HHHHHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CH------HHHHHHHHHcCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhch
Confidence            98      67777765   6899999999753       2477888999999999999887643

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.60  E-value=5e-15  Score=110.87  Aligned_cols=118  Identities=14%  Similarity=0.113  Sum_probs=88.9

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      +.++||+++||||+++||.++++.|++.|   ++|+..+|++      +.+++...+            ...+..++.+|
T Consensus         2 nrL~gK~alITGas~GIG~aia~~la~~G---a~V~~~~~~~------~~~~~~~~~------------~~~~~~~~~~D   60 (253)
T d1hxha_           2 NRLQGKVALVTGGASGVGLEVVKLLLGEG---AKVAFSDINE------AAGQQLAAE------------LGERSMFVRHD   60 (253)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEECSCH------HHHHHHHHH------------HCTTEEEECCC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCH------HHHHHHHHH------------hCCCeEEEEee
Confidence            35789999999999999999999999999   6899988864      333332221            12567889999


Q ss_pred             CCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc--CCCCCce
Q psy17489        112 LESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC--VNLKRFC  175 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v  175 (177)
                      ++++      ++++.++       .++|++|||||...       ..++|+..+++|+.+++.+.+.+.+.  .+-.++|
T Consensus        61 v~~~------~~~~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv  134 (253)
T d1hxha_          61 VSSE------ADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSII  134 (253)
T ss_dssp             TTCH------HHHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEE
T ss_pred             cCCH------HHHHHHHHHHHHHhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCcee
Confidence            9997      4555543       47899999999753       24778999999999999998887542  1224555


Q ss_pred             e
Q psy17489        176 E  176 (177)
Q Consensus       176 ~  176 (177)
                      +
T Consensus       135 ~  135 (253)
T d1hxha_         135 N  135 (253)
T ss_dssp             E
T ss_pred             c
Confidence            4

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.60  E-value=2e-15  Score=116.20  Aligned_cols=119  Identities=18%  Similarity=0.267  Sum_probs=89.1

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcC---eEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIG---AIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~---~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      |+|+||||+||||+++++.|+++|+.+.   +++.++........ ..+..              .....++.++.+|..
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~-~~~~~--------------~~~~~~~~~~~~d~~   65 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNR-ANLAP--------------VDADPRLRFVHGDIR   65 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCG-GGGGG--------------GTTCTTEEEEECCTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccH-hHhhh--------------hhcCCCeEEEEeccc
Confidence            6899999999999999999999997543   46666654322110 00000              012357999999999


Q ss_pred             CCCCCCCHHHHHHHhcCCcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        114 SEHLGLSEDSEQLIKSKVNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      +.      ..........|.|+|+|+.....   ......+++|+.++.+++++|.+. ++++|||.
T Consensus        66 ~~------~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~-~~~~~I~~  125 (322)
T d1r6da_          66 DA------GLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA-GVGRVVHV  125 (322)
T ss_dssp             CH------HHHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT-TCCEEEEE
T ss_pred             cc------hhhhccccccceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHc-CCceEEEe
Confidence            87      66777778899999999876542   334567899999999999999998 88999974

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.60  E-value=1.4e-14  Score=107.67  Aligned_cols=109  Identities=17%  Similarity=0.231  Sum_probs=87.3

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .++||+++||||+++||..+++.|++.|   ++|+..+|+.      +++.+...+            ...++.++++|+
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G---~~V~~~~r~~------~~~~~~~~~------------~~~~~~~~~~Dl   60 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREG---ASLVAVDREE------RLLAEAVAA------------LEAEAIAVVADV   60 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHHT------------CCSSEEEEECCT
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCH------HHHHHHHHH------------cCCceEEEEecC
Confidence            4789999999999999999999999999   6999999875      333333321            235788999999


Q ss_pred             CCCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        113 ESEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                      +++      +++++++       .++|++||||+....       .+.|+..+++|+.++.++.+++...
T Consensus        61 s~~------~~i~~~~~~i~~~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~  124 (241)
T d2a4ka1          61 SDP------KAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEV  124 (241)
T ss_dssp             TSH------HHHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCH------HHHHHHHHHHHHHhCCccEeccccccccccchhhhhccccccccccccccccccccccccc
Confidence            998      5665543       479999999997532       4678889999999999999987664

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.60  E-value=7e-15  Score=110.26  Aligned_cols=109  Identities=16%  Similarity=0.186  Sum_probs=84.6

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      +||.++||||+++||.++++.|++.|   ++|++.+|++      +.+++..++         ......++.++++|+++
T Consensus         1 DgKValITGas~GIG~aia~~la~~G---a~V~i~~r~~------~~l~~~~~~---------l~~~g~~~~~~~~Dvs~   62 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEG---LRVFVCARGE------EGLRTTLKE---------LREAGVEADGRTCDVRS   62 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHHH---------HHHTTCCEEEEECCTTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCH------HHHHHHHHH---------HHhcCCcEEEEEeecCC
Confidence            48999999999999999999999999   6899999864      222222111         01123578999999999


Q ss_pred             CCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        115 EHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       115 ~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      +      ++++.++       .++|++|||||...       ..++|+..+++|+.++.++.+.+.+
T Consensus        63 ~------~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p  123 (257)
T d2rhca1          63 V------PEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLK  123 (257)
T ss_dssp             H------HHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHT
T ss_pred             H------HHHHHHHHHHHHHhCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhH
Confidence            8      5665554       36899999999753       2577889999999999999998754

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.59  E-value=5.9e-15  Score=110.62  Aligned_cols=111  Identities=12%  Similarity=0.162  Sum_probs=85.3

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .++||+++||||+++||.++++.|++.|   ++|++.+|+++      .+++..++         ......++.++++|+
T Consensus         8 ~L~gK~alITGas~GIG~aia~~la~~G---a~V~~~~r~~~------~~~~~~~~---------l~~~g~~~~~~~~Dv   69 (255)
T d1fmca_           8 RLDGKCAIITGAGAGIGKEIAITFATAG---ASVVVSDINAD------AANHVVDE---------IQQLGGQAFACRCDI   69 (255)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHTTT---CEEEEEESCHH------HHHHHHHH---------HHHTTCCEEEEECCT
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHH------HHHHHHHH---------HHHcCCcEEEEEccC
Confidence            3789999999999999999999999999   68999998642      22222111         011235788999999


Q ss_pred             CCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        113 ESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      +++      ++++.++       .++|++|||||...      ..++|+..+++|+.++.++.+.+..
T Consensus        70 s~~------~~~~~~~~~~~~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~  131 (255)
T d1fmca_          70 TSE------QELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAP  131 (255)
T ss_dssp             TCH------HHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCH------HHHHHHHHHHHHHcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHh
Confidence            998      5555543       47999999999753      2477889999999999999887644

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=1.6e-14  Score=108.35  Aligned_cols=113  Identities=18%  Similarity=0.188  Sum_probs=84.8

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      ..++||+++||||+++||.++++.|+++|   .+|+..+|+.      +++++..++..     +  .....++.++.+|
T Consensus         6 ~~lk~Kv~lITGas~GIG~aiA~~la~~G---~~Vv~~~r~~------~~l~~~~~~l~-----~--~~~~~~~~~~~~D   69 (257)
T d1xg5a_           6 ERWRDRLALVTGASGGIGAAVARALVQQG---LKVVGCARTV------GNIEELAAECK-----S--AGYPGTLIPYRCD   69 (257)
T ss_dssp             GGGTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHHHHH-----H--TTCSSEEEEEECC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCH------HHHHHHHHHHH-----h--cCCCceEEEEEcc
Confidence            45789999999999999999999999999   6899998864      22332222100     0  0012468889999


Q ss_pred             CCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHH
Q psy17489        112 LESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAK  166 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~  166 (177)
                      ++++      +++++++       +++|++|||||...       ..+.|+..+++|+.+.+++.+.+.
T Consensus        70 ls~~------~~v~~~v~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~  132 (257)
T d1xg5a_          70 LSNE------EDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAY  132 (257)
T ss_dssp             TTCH------HHHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CCCH------HHHHHHHHHHHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHH
Confidence            9998      5565543       47999999999753       257888999999999999877763

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.58  E-value=8.2e-15  Score=110.07  Aligned_cols=120  Identities=16%  Similarity=0.184  Sum_probs=87.9

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .++||+++||||+++||.++++.|++.|   ++|+..+|++      +++.+...+         ......++..+.+|+
T Consensus         5 ~LkgK~alVTGas~GIG~aiA~~la~~G---a~V~~~~r~~------~~l~~~~~~---------~~~~~~~~~~~~~Dv   66 (259)
T d1xq1a_           5 SLKAKTVLVTGGTKGIGHAIVEEFAGFG---AVIHTCARNE------YELNECLSK---------WQKKGFQVTGSVCDA   66 (259)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHHH---------HHHTTCCEEEEECCT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCH------HHHHHHHHH---------HHhcCCceEEEeccC
Confidence            3689999999999999999999999999   6899999865      222222211         011235788999999


Q ss_pred             CCCCCCCCHHHHHHHh--------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCc
Q psy17489        113 ESEHLGLSEDSEQLIK--------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRF  174 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~--------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~  174 (177)
                      +++      ++++.++        ..+|++|||||...       ..++|+..+++|+.++..+.+.+...   .+-.++
T Consensus        67 ~~~------~~v~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~I  140 (259)
T d1xq1a_          67 SLR------PEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNI  140 (259)
T ss_dssp             TSH------HHHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEE
T ss_pred             CCH------HHHHHHHHHHHHHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccc
Confidence            997      4544432        25899999999753       24788999999999999998876542   144466


Q ss_pred             ee
Q psy17489        175 CE  176 (177)
Q Consensus       175 v~  176 (177)
                      |+
T Consensus       141 v~  142 (259)
T d1xq1a_         141 IF  142 (259)
T ss_dssp             EE
T ss_pred             cc
Confidence            65

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.58  E-value=1.8e-14  Score=108.64  Aligned_cols=111  Identities=16%  Similarity=0.273  Sum_probs=85.2

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      +.++||+++||||+++||.++++.|++.|   ++|+..+|++      +++++...+     +    . ...++.++.+|
T Consensus         2 nrL~gKvalITGas~GIG~aia~~la~~G---a~V~i~~r~~------~~~~~~~~~-----l----~-~~~~~~~~~~D   62 (268)
T d2bgka1           2 NRLQDKVAIITGGAGGIGETTAKLFVRYG---AKVVIADIAD------DHGQKVCNN-----I----G-SPDVISFVHCD   62 (268)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHHH-----H----C-CTTTEEEEECC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCH------HHHHHHHHH-----h----c-CCCceEEEEcc
Confidence            35899999999999999999999999999   6899999864      223222221     0    0 12467889999


Q ss_pred             CCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC---------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        112 LESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR---------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~---------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      ++++      ++++.++       .++|++|||||...         ..++|+..+++|+.++..+.+.+.+
T Consensus        63 v~~~------~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~  128 (268)
T d2bgka1          63 VTKD------EDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAAR  128 (268)
T ss_dssp             TTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCCH------HHHHHHHHHHHHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcc
Confidence            9998      5666554       37899999999642         1367888999999999999987754

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=3.4e-14  Score=108.61  Aligned_cols=118  Identities=18%  Similarity=0.256  Sum_probs=87.8

Q ss_pred             cccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489         31 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS  110 (177)
Q Consensus        31 ~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  110 (177)
                      +.+++||+++||||+++||.++++.|++.|   ++|++.+|+.+.  .++...++...     +   ......++.++.+
T Consensus         7 ~g~L~gKvalITGas~GIG~aia~~la~~G---a~Vvi~~r~~~~--l~~~~~el~~~-----~---~~~~~~~~~~~~~   73 (297)
T d1yxma1           7 PGLLQGQVAIVTGGATGIGKAIVKELLELG---SNVVIASRKLER--LKSAADELQAN-----L---PPTKQARVIPIQC   73 (297)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH--HHHHHHHHHHT-----S---CTTCCCCEEEEEC
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHH--HHHHHHHHHhh-----h---ccccCceEEEEec
Confidence            456899999999999999999999999999   689999987521  11111111110     0   0112357889999


Q ss_pred             CCCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        111 NLESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       111 D~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      |++++      ++++.++       .++|++|||||...       ..++|+..+++|+.+++.+.+.+..
T Consensus        74 Dvs~~------~~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~  138 (297)
T d1yxma1          74 NIRNE------EEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYS  138 (297)
T ss_dssp             CTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cCCCH------HHHHHHHHHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHH
Confidence            99998      5665544       37899999999753       2478889999999999999888754

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.56  E-value=2.4e-14  Score=108.15  Aligned_cols=114  Identities=15%  Similarity=0.233  Sum_probs=84.7

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .++||+++||||+++||.++++.|++.|   ++|++.+|+++.  + +.+.+.+.+         ......++..+.+|+
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~G---a~V~l~~r~~~~--l-~~~~~~l~~---------~~~~~~~~~~~~~Dv   66 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEG---ANVTITGRSSER--L-EETRQIILK---------SGVSEKQVNSVVADV   66 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESCHHH--H-HHHHHHHHT---------TTCCGGGEEEEECCT
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCC---CEEEEEECCHHH--H-HHHHHHHHh---------cCCCCCceEEEEccC
Confidence            4789999999999999999999999999   699999987521  1 222222111         011124688999999


Q ss_pred             CCCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc-----------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        113 ESEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF-----------DEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-----------~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      +++      ++++.++       .++|++|||||....           .+.|+..+++|+.++.++.+++..
T Consensus        67 s~~------~~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p  133 (272)
T d1xkqa_          67 TTE------DGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKP  133 (272)
T ss_dssp             TSH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCH------HHHHHHHHHHHHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcc
Confidence            998      5555544       379999999997421           235888999999999999888654

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.56  E-value=5.8e-15  Score=112.94  Aligned_cols=96  Identities=13%  Similarity=0.215  Sum_probs=74.9

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+||||||+||||++|++.|++.|   ..++++++..                                   ..|+.+. 
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g---~~vi~~~~~~-----------------------------------~~~~~~~-   43 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRG---DVELVLRTRD-----------------------------------ELNLLDS-   43 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCT---TEEEECCCTT-----------------------------------TCCTTCH-
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCc---CEEEEecCch-----------------------------------hccccCH-
Confidence            689999999999999999999998   4565544321                                   1356665 


Q ss_pred             CCCCHHHHHHHhc--CCcEEEEcCcccCc----hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        117 LGLSEDSEQLIKS--KVNIIFHCAASLRF----DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       117 ~~~~~~~~~~~~~--~~d~vi~~aa~~~~----~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                           +.+..++.  .+|.++|+|+..+.    .....+++++|+.++.+++++|++. +++||||+
T Consensus        44 -----~~~~~~~~~~~~d~v~~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~v~~~i~~  104 (315)
T d1e6ua_          44 -----RAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQN-DVNKLLFL  104 (315)
T ss_dssp             -----HHHHHHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEE
T ss_pred             -----HHHHHHHhhcCCCEEEEcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEE
Confidence                 56666654  58999999987653    2334557899999999999999999 99999984

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.55  E-value=1.8e-14  Score=107.90  Aligned_cols=116  Identities=9%  Similarity=0.089  Sum_probs=83.4

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      ++||+++||||+++||..++++|++.|   ++|++++|+.+..   +.+.++...           ....++.++.+|++
T Consensus         3 l~gK~vlITGgs~GIG~~~A~~la~~G---~~vii~~r~~~~~---~~~~~~~~~-----------~~~~~~~~~~~d~~   65 (254)
T d1sbya1           3 LTNKNVIFVAALGGIGLDTSRELVKRN---LKNFVILDRVENP---TALAELKAI-----------NPKVNITFHTYDVT   65 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTC---CSEEEEEESSCCH---HHHHHHHHH-----------CTTSEEEEEECCTT
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCC---CEEEEEECCcccH---HHHHHHHhh-----------CCCCCEEEEEeecC
Confidence            689999999999999999999999999   6888888876543   222222211           12246888999998


Q ss_pred             CCC--CCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        114 SEH--LGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       114 ~~~--~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      ...  +....+.+.+.+.++|++|||||... .++|+..+++|+.++.++.+.+.+
T Consensus        66 ~~~~~~~~~~~~~~~~~g~iDilvnnAG~~~-~~~~~~~~~vNl~g~~~~~~~~~~  120 (254)
T d1sbya1          66 VPVAESKKLLKKIFDQLKTVDILINGAGILD-DHQIERTIAINFTGLVNTTTAILD  120 (254)
T ss_dssp             SCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-TTCHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEeCCCCCC-HHHHHHHHHHHhHHHHHHHHHHHH
Confidence            531  10001222222447999999999754 567899999999999999887654

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.55  E-value=2.4e-14  Score=108.40  Aligned_cols=107  Identities=15%  Similarity=0.314  Sum_probs=83.6

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      ++||+++||||+++||.++++.|++.|   ++|++.+|+.      +++.+...+            ...++..+.+|++
T Consensus         3 L~gK~alITGas~GIG~aia~~la~~G---a~V~i~~r~~------~~l~~~~~~------------~~~~~~~~~~Dv~   61 (276)
T d1bdba_           3 LKGEAVLITGGASGLGRALVDRFVAEG---AKVAVLDKSA------ERLAELETD------------HGDNVLGIVGDVR   61 (276)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHHH------------HGGGEEEEECCTT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCH------HHHHHHHHH------------cCCCeeEEecccc
Confidence            689999999999999999999999999   6999999864      333333221            1246889999999


Q ss_pred             CCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc------------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF------------DEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~------------~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      +.      ++++.++       .++|++|||||....            .+.|+..+++|+.++..+.+.+.+
T Consensus        62 ~~------~~~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p  128 (276)
T d1bdba_          62 SL------EDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLP  128 (276)
T ss_dssp             CH------HHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cH------HHHHHHHHHHHHHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHH
Confidence            98      5555543       378999999996421            235888999999999999887643

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.55  E-value=2.5e-14  Score=107.31  Aligned_cols=114  Identities=11%  Similarity=0.066  Sum_probs=86.6

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      ..++||+++||||+++||.++++.|++.|   ++|++.+++...  ..+.+.+.+.            ....++..+.+|
T Consensus         2 ~~L~GK~alITGas~GIG~aia~~la~~G---~~Vvi~~~~~~~--~~~~~~~~~~------------~~g~~~~~~~~D   64 (259)
T d1ja9a_           2 KPLAGKVALTTGAGRGIGRGIAIELGRRG---ASVVVNYGSSSK--AAEEVVAELK------------KLGAQGVAIQAD   64 (259)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSCHH--HHHHHHHHHH------------HTTCCEEEEECC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEcCCChH--HHHHHHHHHH------------HcCCCceEecCC
Confidence            35899999999999999999999999999   688877665421  1122222222            134678899999


Q ss_pred             CCCCCCCCCHHHHHHHhc-------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        112 LESEHLGLSEDSEQLIKS-------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~-------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                      +++.      ++++..++       ++|++|||||...       ..+.|+..+++|+.+..++++.+.++
T Consensus        65 ~~~~------~~v~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  129 (259)
T d1ja9a_          65 ISKP------SEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKH  129 (259)
T ss_dssp             TTSH------HHHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CCCH------HHHHHHHHHHHHHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhh
Confidence            9997      55555443       6899999999753       24678889999999999999988653

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.55  E-value=2.8e-14  Score=107.02  Aligned_cols=119  Identities=17%  Similarity=0.196  Sum_probs=88.5

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      ++||+++||||+++||.++++.|++.|   ++|+..+|++.  .+++..++ ..            .....+.++.+|++
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G---~~V~i~~r~~~--~l~~~~~~-~~------------~~~~~~~~~~~D~s   65 (258)
T d1ae1a_           4 LKGTTALVTGGSKGIGYAIVEELAGLG---ARVYTCSRNEK--ELDECLEI-WR------------EKGLNVEGSVCDLL   65 (258)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCHH--HHHHHHHH-HH------------HTTCCEEEEECCTT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHH--HHHHHHHH-HH------------hcCCCceEEEeecC
Confidence            689999999999999999999999999   68999998752  12122221 11            13356888999999


Q ss_pred             CCCCCCCHHHHHHHhc--------CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCce
Q psy17489        114 SEHLGLSEDSEQLIKS--------KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFC  175 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~--------~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v  175 (177)
                      +.      ++++.+++        .+|+++||||...       ..++|...+++|+.++..+.+++...   ++..++|
T Consensus        66 ~~------~~~~~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii  139 (258)
T d1ae1a_          66 SR------TERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVI  139 (258)
T ss_dssp             CH------HHHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred             CH------HHHHHHHHHHHHHhCCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccc
Confidence            98      55544432        4899999999764       25789999999999999998876532   2444555


Q ss_pred             e
Q psy17489        176 E  176 (177)
Q Consensus       176 ~  176 (177)
                      +
T Consensus       140 ~  140 (258)
T d1ae1a_         140 F  140 (258)
T ss_dssp             E
T ss_pred             c
Confidence            4

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.55  E-value=6.4e-14  Score=104.31  Aligned_cols=110  Identities=16%  Similarity=0.250  Sum_probs=80.8

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      ++|+|+||||+++||.++++.|++.+..-.+|++.+|+++..   +.+.+...             ...++.++.+|+++
T Consensus         1 ~MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~---~~~~~~~~-------------~~~~~~~~~~Dvs~   64 (248)
T d1snya_           1 HMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQA---KELEDLAK-------------NHSNIHILEIDLRN   64 (248)
T ss_dssp             CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSC---HHHHHHHH-------------HCTTEEEEECCTTC
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHH---HHHHHHHh-------------cCCcEEEEEEEecc
Confidence            468999999999999999999975321226999999987543   23333222             23689999999999


Q ss_pred             CCCCCCHHHHHHHh---------cCCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHH
Q psy17489        115 EHLGLSEDSEQLIK---------SKVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAK  166 (177)
Q Consensus       115 ~~~~~~~~~~~~~~---------~~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~  166 (177)
                      +      ++++.++         .++|++|||||...        ..+.+++.+++|+.++..+.+.+.
T Consensus        65 ~------~~v~~~~~~i~~~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~  127 (248)
T d1snya_          65 F------DAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACL  127 (248)
T ss_dssp             G------GGHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             H------HHHHHHHhhhHHHhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHH
Confidence            8      4444332         36899999999742        135577899999999999988753

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.55  E-value=3.2e-14  Score=107.02  Aligned_cols=114  Identities=13%  Similarity=0.171  Sum_probs=83.4

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .++||+++||||+++||.++++.|++.|   ++|++.+|+++.  + +++.+.+..         ......++.++.+|+
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~G---a~V~~~~r~~~~--l-~~~~~~l~~---------~~~~~~~~~~~~~Dv   66 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREG---AKVTITGRHAER--L-EETRQQILA---------AGVSEQNVNSVVADV   66 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHH--H-HHHHHHHHH---------TTCCGGGEEEEECCT
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCC---CEEEEEECCHHH--H-HHHHHHHHh---------cCCCcCceEEEEccC
Confidence            4789999999999999999999999999   689999987521  1 112111111         001124688999999


Q ss_pred             CCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-----------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        113 ESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-----------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-----------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      +++      ++++.++       .++|++|||||...           ..++|+..+++|+.++..+.+.+.+
T Consensus        67 t~~------~~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p  133 (264)
T d1spxa_          67 TTD------AGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVP  133 (264)
T ss_dssp             TSH------HHHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCH------HHHHHHHHHHHHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCC
Confidence            998      5565554       37999999999642           1367888999999999999888754

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.54  E-value=1.7e-14  Score=111.24  Aligned_cols=114  Identities=16%  Similarity=0.139  Sum_probs=81.3

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |++|||||+||||+||+..|++.|   +.|++++|....... .++.++..        .........+.++.+|+.+. 
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g---~~V~~~~r~~~~~~~-~~~~~~~~--------~~~~~~~~~~~~~~~Di~~~-   68 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKG---YEVHGLIRRSSNFNT-QRINHIYI--------DPHNVNKALMKLHYADLTDA-   68 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECCCSSCCC-TTTTTTC----------------CCEEEEECCTTCH-
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCc---CEEEEEECCCcccch-hhhhhhhh--------hhhhccccceEEEEccccCH-
Confidence            689999999999999999999999   599999986421100 00000000        00001235688999999998 


Q ss_pred             CCCCHHHHHHHhc--CCcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        117 LGLSEDSEQLIKS--KVNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       117 ~~~~~~~~~~~~~--~~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                           +.+...++  ++|+|||+||.....   +++...+..|+.++.+++++++..
T Consensus        69 -----~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~  120 (339)
T d1n7ha_          69 -----SSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH  120 (339)
T ss_dssp             -----HHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             -----HHHHHHHhhhccchhhhccccccccccccCccccccccccccchhhhhhhhc
Confidence                 67887775  679999999987654   344567899999999999988754

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.54  E-value=4.6e-14  Score=105.64  Aligned_cols=106  Identities=17%  Similarity=0.129  Sum_probs=80.9

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |.++||||+++||.++++.|++.|   ++|+..+|+++.  + +.+.+.+.            ....++..+.+|++++ 
T Consensus         2 KValITGas~GIG~aia~~la~~G---a~V~~~~r~~~~--l-~~~~~~i~------------~~g~~~~~~~~Dv~~~-   62 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDG---FAVAIADYNDAT--A-KAVASEIN------------QAGGHAVAVKVDVSDR-   62 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHH--H-HHHHHHHH------------HTTCCEEEEECCTTSH-
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCC---CEEEEEECCHHH--H-HHHHHHHH------------hcCCcEEEEEeeCCCH-
Confidence            457999999999999999999999   689999986521  1 11222111            1235788999999998 


Q ss_pred             CCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHH
Q psy17489        117 LGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAK  166 (177)
Q Consensus       117 ~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~  166 (177)
                           ++++.++       .++|++|||||...       ..+.|+..+++|+.++.++.+.+.
T Consensus        63 -----~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~  121 (255)
T d1gega_          63 -----DQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAV  121 (255)
T ss_dssp             -----HHHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             -----HHHHHHHHHHHHHhCCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhc
Confidence                 5665553       37999999999753       247788999999999999988764

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.53  E-value=5.7e-14  Score=106.15  Aligned_cols=114  Identities=18%  Similarity=0.213  Sum_probs=84.2

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .++||+++||||+++||.++++.|++.|   ++|++.+|+++.  + +.+.+.+.+.         .....++..+.+|+
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~G---a~V~~~~r~~~~--l-~~~~~~i~~~---------~~~~~~~~~~~~Dv   65 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEG---AQVTITGRNEDR--L-EETKQQILKA---------GVPAEKINAVVADV   65 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESCHHH--H-HHHHHHHHHT---------TCCGGGEEEEECCT
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHH--H-HHHHHHHHHc---------CCCCcceEEEEeeC
Confidence            3689999999999999999999999999   699999986521  1 1222211110         01124688999999


Q ss_pred             CCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC---------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        113 ESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR---------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~---------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      +++      ++++.++       .++|++|||||...         ..+.|+..+++|+.+++.+.+.+..
T Consensus        66 ~~~------~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~  130 (274)
T d1xhla_          66 TEA------SGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKE  130 (274)
T ss_dssp             TSH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCH------HHHHHHHHHHHHHcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccc
Confidence            998      5555544       37899999998632         1356888999999999999888754

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.52  E-value=8.1e-14  Score=102.99  Aligned_cols=102  Identities=20%  Similarity=0.220  Sum_probs=81.1

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      ++||+++||||+++||.++++.|++.|   ++|++.+|++      +.+++                  ....++.+|++
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~G---a~V~~~~r~~------~~l~~------------------~~~~~~~~Dv~   54 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEG---AEVTICARNE------ELLKR------------------SGHRYVVCDLR   54 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHH------------------TCSEEEECCTT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCH------HHHHh------------------cCCcEEEcchH
Confidence            579999999999999999999999999   6899999864      33332                  23457789998


Q ss_pred             CCCCCCCHHHHHHHhcCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        114 SEHLGLSEDSEQLIKSKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      +.-     +.+.+.++++|++|||||...       ..++|++.+++|+.++..+.+.+.+
T Consensus        55 ~~~-----~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  110 (234)
T d1o5ia_          55 KDL-----DLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLP  110 (234)
T ss_dssp             TCH-----HHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             HHH-----HHHHHHhCCCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccc
Confidence            752     555566678999999999643       2477888999999999999887643

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=6.4e-14  Score=104.76  Aligned_cols=110  Identities=15%  Similarity=0.174  Sum_probs=83.3

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      +||+++||||+++||.++++.|++.|   ++|++.+|+.      +++.+....     +.+..  ...++.++.+|+++
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~G---a~V~i~~r~~------~~~~~~~~~-----l~~~~--~~~~~~~~~~Dv~~   65 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKG---AKVALVDWNL------EAGVQCKAA-----LHEQF--EPQKTLFIQCDVAD   65 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHHH-----HTTTS--CGGGEEEEECCTTS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCH------HHHHHHHHH-----HHHhc--CCCcEEEEEeecCC
Confidence            68999999999999999999999999   6999999875      222222111     00000  12468899999999


Q ss_pred             CCCCCCHHHHHHHh-------cCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        115 EHLGLSEDSEQLIK-------SKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       115 ~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      +      ++++.++       .++|++|||||... ..+|++.+++|+.++.++.+++.+
T Consensus        66 ~------~~v~~~~~~~~~~~G~iDilVnnAg~~~-~~~~~~~~~~n~~~~~~~~~~~~~  118 (254)
T d2gdza1          66 Q------QQLRDTFRKVVDHFGRLDILVNNAGVNN-EKNWEKTLQINLVSVISGTYLGLD  118 (254)
T ss_dssp             H------HHHHHHHHHHHHHHSCCCEEEECCCCCC-SSSHHHHHHHHTHHHHHHHHHHHH
T ss_pred             H------HHHHHHHHHHHHHcCCcCeecccccccc-cccchheeeeehhhHHHHHHHHHH
Confidence            8      5565554       37999999999864 457888999999999888877654

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.52  E-value=1.4e-13  Score=102.85  Aligned_cols=121  Identities=24%  Similarity=0.390  Sum_probs=91.7

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCC-CChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG-SSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      -+++++||||+|+||.++++.|++.|.  .+|+.++|+... +...+.+.++..             ...++.++.+|++
T Consensus         8 p~gt~lVTGgs~GIG~a~a~~la~~Ga--~~vvl~~R~~~~~~~~~~~~~~l~~-------------~g~~v~~~~~Dv~   72 (259)
T d2fr1a1           8 PTGTVLVTGGTGGVGGQIARWLARRGA--PHLLLVSRSGPDADGAGELVAELEA-------------LGARTTVAACDVT   72 (259)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTC--SEEEEEESSGGGSTTHHHHHHHHHH-------------TTCEEEEEECCTT
T ss_pred             CcCEEEEECCCcHHHHHHHHHHHHCCC--CEEEEEeCCccCHHHHHHHHHHHHh-------------ccccccccccccc
Confidence            457999999999999999999999994  468888886432 333333333322             2357899999999


Q ss_pred             CCCCCCCHHHHHHHhc------CCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        114 SEHLGLSEDSEQLIKS------KVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~------~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                      +.      +++..+++      ++|.|+|+++....       .+.++..+.+|+.++.++.++.... ...+||++
T Consensus        73 d~------~~~~~~~~~i~~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~-~~~~iv~~  142 (259)
T d2fr1a1          73 DR------ESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL-DLTAFVLF  142 (259)
T ss_dssp             CH------HHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS-CCSEEEEE
T ss_pred             hH------HHHHHhhccccccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhcc-CCceEeee
Confidence            98      67777665      47899999997542       3567778999999999999988776 66677653

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.51  E-value=1.2e-13  Score=104.11  Aligned_cols=116  Identities=14%  Similarity=0.098  Sum_probs=88.0

Q ss_pred             ccccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEe
Q psy17489         30 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIP  109 (177)
Q Consensus        30 ~~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  109 (177)
                      .+..++||+++||||+++||.++++.|++.|   ++|++.+|+...  ..+.+.+.+.+            ...++.++.
T Consensus        12 ~~~sL~gK~~lITGas~GIG~aia~~la~~G---a~Vvi~~~~~~~--~~~~~~~~~~~------------~g~~~~~~~   74 (272)
T d1g0oa_          12 QSASLEGKVALVTGAGRGIGREMAMELGRRG---CKVIVNYANSTE--SAEEVVAAIKK------------NGSDAACVK   74 (272)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSCHH--HHHHHHHHHHH------------TTCCEEEEE
T ss_pred             CCcCCCCCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEeCCchH--HHHHHHHHHHh------------hCCceeeEe
Confidence            3445899999999999999999999999999   689888876421  11222222211            345788999


Q ss_pred             CCCCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        110 SNLESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       110 ~D~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                      +|++++      +++...+       .++|+++|+++...       ..+.|...+++|+.++..+.+.+...
T Consensus        75 ~D~~~~------~~v~~~~~~~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~  141 (272)
T d1g0oa_          75 ANVGVV------EDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKH  141 (272)
T ss_dssp             CCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CCCCCH------HHHHHHHHHHHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccc
Confidence            999997      5555543       37899999999753       24678889999999999999988753

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.51  E-value=4.9e-14  Score=105.06  Aligned_cols=107  Identities=18%  Similarity=0.237  Sum_probs=80.1

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      ..|+|+||||+++||.+++++|++.|.. .+|+..+|+.+..   +.+.+               ....++.++.+|+++
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~G~~-~~Vi~~~R~~~~~---~~l~~---------------~~~~~~~~~~~Dvs~   62 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKDKNI-RHIIATARDVEKA---TELKS---------------IKDSRVHVLPLTVTC   62 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTC-CEEEEEESSGGGC---HHHHT---------------CCCTTEEEEECCTTC
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCC-CEEEEEeCCHHHH---HHHHH---------------hhCCceEEEEEecCC
Confidence            4589999999999999999999999842 3788888875322   22211               123578999999999


Q ss_pred             CCCCCCHHHHHHHhc---------CCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHH
Q psy17489        115 EHLGLSEDSEQLIKS---------KVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAK  166 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~---------~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~  166 (177)
                      .      ++++.+++         ++|++|||||...        ..+.|++.+++|+.++..+.+.+.
T Consensus        63 ~------~~v~~~~~~i~~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~  125 (250)
T d1yo6a1          63 D------KSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLL  125 (250)
T ss_dssp             H------HHHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTH
T ss_pred             H------HHHHHHHHHHHHHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHH
Confidence            8      55554432         3899999999642        135688899999999999988754

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=7.4e-14  Score=105.47  Aligned_cols=108  Identities=15%  Similarity=0.207  Sum_probs=81.0

Q ss_pred             Cce-EEEecCCcchHHHHHHHHHhh-CCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         36 DGQ-ILVTGGTGFMGKLLIDKLLRS-FPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        36 ~~~-vlVtG~~G~iG~~l~~~L~~~-g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      ||+ ++||||+++||.++++.|++. |   .+|++.+|+.+.  .++..+++..             ...++.++.+|++
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g---~~Vi~~~r~~~~--~~~~~~~l~~-------------~~~~~~~~~~Dvs   63 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFS---GDVVLTARDVTR--GQAAVQQLQA-------------EGLSPRFHQLDID   63 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSS---SEEEEEESSHHH--HHHHHHHHHH-------------TTCCCEEEECCTT
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCC---CEEEEEECCHHH--HHHHHHHHHh-------------cCCcEEEEEEecC
Confidence            555 599999999999999999986 6   689999997521  1121222111             2357889999999


Q ss_pred             CCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      +.      +++++++       .++|++|||||....       .+.|+..+++|+.++..+.+.+..
T Consensus        64 ~~------~sv~~~~~~~~~~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp  125 (275)
T d1wmaa1          64 DL------QSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLP  125 (275)
T ss_dssp             CH------HHHHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred             CH------HHHHHHHHHHHHhcCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            98      5655543       379999999997532       456778899999999999998865

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.50  E-value=4.8e-14  Score=102.85  Aligned_cols=110  Identities=17%  Similarity=0.197  Sum_probs=83.6

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      ++++||||||+||||+++++.|++.|+.+ .|+++.|++.      ....                ...+++++.+|+.+
T Consensus         2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v-~v~~~~R~~~------~~~~----------------~~~~~~~~~~d~~~   58 (252)
T d2q46a1           2 NLPTVLVTGASGRTGQIVYKKLKEGSDKF-VAKGLVRSAQ------GKEK----------------IGGEADVFIGDITD   58 (252)
T ss_dssp             SCCEEEEESTTSTTHHHHHHHHHHTTTTC-EEEEEESCHH------HHHH----------------TTCCTTEEECCTTS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCcE-EEEEEcCCHH------HHHh----------------ccCCcEEEEeeecc
Confidence            46799999999999999999999999654 6777777541      1111                12578899999999


Q ss_pred             CCCCCCHHHHHHHhcCCcEEEEcCcccCc----------------hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCc
Q psy17489        115 EHLGLSEDSEQLIKSKVNIIFHCAASLRF----------------DEALQKAIRANLYATKQMLNLAKECVNLKRF  174 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~----------------~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~  174 (177)
                      .      +.+..+++++|.|||+|+....                .........+|+.++.+++..+... ..+.+
T Consensus        59 ~------~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  127 (252)
T d2q46a1          59 A------DSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-GVKHI  127 (252)
T ss_dssp             H------HHHHHHHTTCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-TCSEE
T ss_pred             c------cccccccccceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccc-ccccc
Confidence            8      7889999999999999986431                1123335688999999999988775 44443

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.50  E-value=8.9e-14  Score=103.44  Aligned_cols=117  Identities=14%  Similarity=0.172  Sum_probs=84.6

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      +.++||||+++||.++++.|++.|   ++|++.+++..  ...+.+.+....            ...++.++.+|++++ 
T Consensus         2 pV~lITGas~GIG~a~a~~la~~G---a~V~i~~~~~~--~~~~~~~~~~~~------------~g~~~~~~~~Dv~~~-   63 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAG---CKVLVNYARSA--KAAEEVSKQIEA------------YGGQAITFGGDVSKE-   63 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCH--HHHHHHHHHHHH------------HTCEEEEEECCTTSH-
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCCH--HHHHHHHHHHHH------------cCCcEEEEeCCCCCH-
Confidence            379999999999999999999999   68887665432  111222222221            235788999999998 


Q ss_pred             CCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCcee
Q psy17489        117 LGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFCE  176 (177)
Q Consensus       117 ~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~  176 (177)
                           ++++.++       .++|++|||||...       ..+.|+..+++|+.++.++.+.+.+.   .+-.++|+
T Consensus        64 -----~~v~~~~~~~~~~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVn  135 (244)
T d1edoa_          64 -----ADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIIN  135 (244)
T ss_dssp             -----HHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred             -----HHHHHHHHHHHHHcCCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEE
Confidence                 5665554       37899999999754       24788999999999999998876442   13446665

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.48  E-value=1.3e-13  Score=105.51  Aligned_cols=128  Identities=16%  Similarity=0.147  Sum_probs=83.8

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCC---ChHHHHHHHHhhhhhhcccccCcccCCCeEEEe
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGS---SPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIP  109 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  109 (177)
                      .++||+++||||+++||.++++.|++.|   ++|++.+|+.+..   +..+.+.+.....            ..+...+.
T Consensus         4 ~l~gKvalITGas~GIG~aiA~~la~~G---a~Vvi~d~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~   68 (302)
T d1gz6a_           4 RFDGRVVLVTGAGGGLGRAYALAFAERG---ALVVVNDLGGDFKGVGKGSSAADKVVEEI------------RRRGGKAV   68 (302)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEECCCBCTTSCBCCSHHHHHHHHHH------------HHTTCEEE
T ss_pred             CcCCCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEeCCchhhhhhhhHHHHHHHHHHH------------hhcccccc
Confidence            4789999999999999999999999999   6899988764321   1112222222110            01233445


Q ss_pred             CCCCCCCCCCCHHHHHH---HhcCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCcee
Q psy17489        110 SNLESEHLGLSEDSEQL---IKSKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKEC---VNLKRFCE  176 (177)
Q Consensus       110 ~D~~~~~~~~~~~~~~~---~~~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~  176 (177)
                      +|+.+..-  ....++.   .+.++|++|||||....       .++|+..+++|+.+++++.+.+..+   .+-.++|+
T Consensus        69 ~d~~~~~~--~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~  146 (302)
T d1gz6a_          69 ANYDSVEA--GEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIM  146 (302)
T ss_dssp             EECCCGGG--HHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred             cccchHHH--HHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEE
Confidence            56666520  0111222   23479999999997542       4788999999999999998876432   13446665


Q ss_pred             C
Q psy17489        177 L  177 (177)
Q Consensus       177 v  177 (177)
                      +
T Consensus       147 i  147 (302)
T d1gz6a_         147 T  147 (302)
T ss_dssp             E
T ss_pred             e
Confidence            3

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.48  E-value=2.1e-13  Score=101.17  Aligned_cols=109  Identities=12%  Similarity=0.148  Sum_probs=79.8

Q ss_pred             eEEEecCCcchHHHHHHHHHhhCCCc----CeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         38 QILVTGGTGFMGKLLIDKLLRSFPDI----GAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        38 ~vlVtG~~G~iG~~l~~~L~~~g~~~----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      .++||||+++||.++++.|++.|+++    ..|+..+|+.      +.+++...+         ......++.++.+|++
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~------~~l~~~~~~---------~~~~g~~~~~~~~Dvt   67 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTA------ADLEKISLE---------CRAEGALTDTITADIS   67 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCH------HHHHHHHHH---------HHTTTCEEEEEECCTT
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCH------HHHHHHHHH---------HHhcCCcEEEEEecCC
Confidence            48999999999999999999999531    1377777764      222222111         1113457888999999


Q ss_pred             CCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        114 SEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      +.      +++++++       .++|++|||||...       ..++|+..+++|+.+++.+.+.+..
T Consensus        68 ~~------~~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~  129 (240)
T d2bd0a1          68 DM------ADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFA  129 (240)
T ss_dssp             SH------HHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CH------HHHHHHHHHHHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhH
Confidence            98      5555544       36899999999753       2578889999999999999887654

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.46  E-value=3.9e-14  Score=106.76  Aligned_cols=93  Identities=17%  Similarity=0.119  Sum_probs=72.9

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+||||||+||||++|++.|.+.|    +++.++++...                                +.+|+++. 
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g----~~v~~~~~~~~--------------------------------~~~Dl~~~-   43 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVG----NLIALDVHSKE--------------------------------FCGDFSNP-   43 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTS----EEEEECTTCSS--------------------------------SCCCTTCH-
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCC----CEEEEECCCcc--------------------------------ccCcCCCH-
Confidence            679999999999999999999887    45566554321                                34688887 


Q ss_pred             CCCCHHHHHHHhc--CCcEEEEcCcccCc---hHHHHHHHHHhHHHHHHHHHHHHhcCCCC
Q psy17489        117 LGLSEDSEQLIKS--KVNIIFHCAASLRF---DEALQKAIRANLYATKQMLNLAKECVNLK  172 (177)
Q Consensus       117 ~~~~~~~~~~~~~--~~d~vi~~aa~~~~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~~  172 (177)
                           +.+.++++  ++|+|||+||....   .......++.|+.++.++++++++. +++
T Consensus        44 -----~~~~~~i~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~   98 (298)
T d1n2sa_          44 -----KGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANET-GAW   98 (298)
T ss_dssp             -----HHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTT-TCE
T ss_pred             -----HHHHHHHHHcCCCEEEEecccccccccccCccccccccccccccchhhhhcc-ccc
Confidence                 67888876  56999999997654   2334557899999999999999987 553

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.46  E-value=2.6e-14  Score=103.68  Aligned_cols=107  Identities=13%  Similarity=0.214  Sum_probs=76.8

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      .|+|+|||||||||++++++|++.|+ ..+|++..|++...                         .+++.....|+.+ 
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~-~~~v~~~~r~~~~~-------------------------~~~~~~~~~d~~~-   54 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPT-LAKVIAPARKALAE-------------------------HPRLDNPVGPLAE-   54 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTT-CCEEECCBSSCCCC-------------------------CTTEECCBSCHHH-
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEEEeCCchhh-------------------------cccccccccchhh-
Confidence            48999999999999999999999984 34788887765321                         1233333333221 


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCceeC
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKECVNLKRFCEL  177 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~v  177 (177)
                             ........+|.+||++|.... ......+.+.|+.++.+++++|++. ++++|+|+
T Consensus        55 -------~~~~~~~~~d~vi~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~-~v~~~i~~  109 (212)
T d2a35a1          55 -------LLPQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEM-GARHYLVV  109 (212)
T ss_dssp             -------HGGGCCSCCSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEE
T ss_pred             -------hhhccccchheeeeeeeeeccccccccccccchhhhhhhcccccccc-cccccccc
Confidence                   122223468999999986532 2334567899999999999999998 99999974

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=4.9e-13  Score=99.37  Aligned_cols=106  Identities=9%  Similarity=0.127  Sum_probs=82.1

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      +++||+++||||+++||+++++.|+++|   ++|++.+|++      +++++..+              ...+....+|+
T Consensus         3 ~l~gK~alITGas~GIG~aia~~la~~G---~~Vi~~~r~~------~~l~~~~~--------------~~~~~~~~~d~   59 (245)
T d2ag5a1           3 RLDGKVIILTAAAQGIGQAAALAFAREG---AKVIATDINE------SKLQELEK--------------YPGIQTRVLDV   59 (245)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESCH------HHHGGGGG--------------STTEEEEECCT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEeCCH------HHHHHHHh--------------ccCCceeeeec
Confidence            4789999999999999999999999999   6999999864      23322111              24577788888


Q ss_pred             CCCCCCCCHHHHHHH---hcCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        113 ESEHLGLSEDSEQLI---KSKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~---~~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      .+.      +..+..   +.++|++||+||....       .+.|+..+++|+.++..+.+.+.+
T Consensus        60 ~~~------~~~~~~~~~~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~  118 (245)
T d2ag5a1          60 TKK------KQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLP  118 (245)
T ss_dssp             TCH------HHHHHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             ccc------ccccccccccccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCc
Confidence            765      344443   3479999999997542       467888999999999999887754

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.44  E-value=3.7e-13  Score=100.51  Aligned_cols=110  Identities=11%  Similarity=0.114  Sum_probs=82.9

Q ss_pred             cCCCceEEEecCCc--chHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489         33 FYRDGQILVTGGTG--FMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS  110 (177)
Q Consensus        33 ~~~~~~vlVtG~~G--~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  110 (177)
                      .++||+++||||+|  +||.++++.|++.|   ++|++.+|++..   .+...+...             ...+..++++
T Consensus         5 ~L~gK~alITGas~~~GIG~aiA~~la~~G---a~V~i~~~~~~~---~~~~~~~~~-------------~~~~~~~~~~   65 (256)
T d1ulua_           5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAG---AEVALSYQAERL---RPEAEKLAE-------------ALGGALLFRA   65 (256)
T ss_dssp             CCTTCEEEEESCCCSSSHHHHHHHHHHHTT---CEEEEEESSGGG---HHHHHHHHH-------------HTTCCEEEEC
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCC---CEEEEEeCcHHH---HHHHHHhhh-------------ccCccccccc
Confidence            47899999999987  89999999999999   688888876432   222222221             1246778999


Q ss_pred             CCCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC-----------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        111 NLESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR-----------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       111 D~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~-----------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      |++++      ++++.++       .++|++||||+...           ..++|+..+++|+.++..+.+.+..
T Consensus        66 D~~~~------~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~  134 (256)
T d1ulua_          66 DVTQD------EELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEP  134 (256)
T ss_dssp             CTTCH------HHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTT
T ss_pred             ccCCH------HHHHHHHHHHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHH
Confidence            99998      5565554       37899999998642           1356777899999999999988764

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.43  E-value=1.2e-12  Score=99.43  Aligned_cols=111  Identities=17%  Similarity=0.130  Sum_probs=81.8

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      ..++||+++||||+|+||.++++.|++.|   .+|+..+|+..  ..++..+++..+            ...++.++.+|
T Consensus        21 ~~l~gK~alITGas~GIG~aiA~~la~~G---a~Vii~~r~~~--~l~~~~~~l~~~------------~g~~~~~~~~D   83 (294)
T d1w6ua_          21 NSFQGKVAFITGGGTGLGKGMTTLLSSLG---AQCVIASRKMD--VLKATAEQISSQ------------TGNKVHAIQCD   83 (294)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHH--HHHHHHHHHHHH------------HSSCEEEEECC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEECCHH--HHHHHHHHHHHh------------cCCceEEEEec
Confidence            46899999999999999999999999999   69999998752  111222222211            23567889999


Q ss_pred             CCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc-------hHHHHHHHHHhHHHHHHHHHHH
Q psy17489        112 LESEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF-------DEALQKAIRANLYATKQMLNLA  165 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~-------~~~~~~~~~~nv~~~~~ll~~~  165 (177)
                      +++.      +.++.++       .++|++|||||....       ..++...+.+|......+...+
T Consensus        84 ~~~~------~~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~  145 (294)
T d1w6ua_          84 VRDP------DMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEI  145 (294)
T ss_dssp             TTCH------HHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCh------HHHHHHhhhhhhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhh
Confidence            9998      5555443       378999999997532       3567777888888877775543

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=7e-13  Score=100.64  Aligned_cols=122  Identities=16%  Similarity=0.162  Sum_probs=86.0

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |.++||||+++||.++++.|++.|.++..|+...|+....   +++.+....         ......++..+.+|+++. 
T Consensus         3 kVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~---~~l~~~~~~---------~~~~~~~~~~~~~Dv~~~-   69 (285)
T d1jtva_           3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQ---GRLWEAARA---------LACPPGSLETLQLDVRDS-   69 (285)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGT---HHHHHHHHH---------TTCCTTSEEEEECCTTCH-
T ss_pred             CEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhh---HHHHHHHHH---------HhccCCceEEEeccccch-
Confidence            5689999999999999999999995444455555543222   333332221         122346899999999998 


Q ss_pred             CCCCHHHHHHHhc-----CCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCcee
Q psy17489        117 LGLSEDSEQLIKS-----KVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFCE  176 (177)
Q Consensus       117 ~~~~~~~~~~~~~-----~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~  176 (177)
                           +++..+++     .+|+++|||+...       ..+.|+..+++|+.++.++.+++...   .+-.++|+
T Consensus        70 -----~~~~~~~~~~~~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~  139 (285)
T d1jtva_          70 -----KSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLV  139 (285)
T ss_dssp             -----HHHHHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred             -----HhhhhhhhhccccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEE
Confidence                 67777654     5899999999753       24678889999999999998876431   13445554

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=1.4e-12  Score=98.00  Aligned_cols=114  Identities=11%  Similarity=0.171  Sum_probs=82.8

Q ss_pred             cccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489         31 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS  110 (177)
Q Consensus        31 ~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  110 (177)
                      +.+++||+++||||+++||.++++.|++.|   .+|++.+|+.      +.+++...+..        ......+..+.+
T Consensus         9 ~~~L~GK~alITGassGIG~aiA~~la~~G---~~Vil~~r~~------~~l~~~~~~~~--------~~~~~~~~~~~~   71 (269)
T d1xu9a_           9 PEMLQGKKVIVTGASKGIGREMAYHLAKMG---AHVVVTARSK------ETLQKVVSHCL--------ELGAASAHYIAG   71 (269)
T ss_dssp             GGGGTTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHHHHH--------HHTCSEEEEEEC
T ss_pred             ccccCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCH------HHHHHHHHHHh--------hhhcccchhhhh
Confidence            345899999999999999999999999999   6999999975      23332222100        002345677888


Q ss_pred             CCCCCCCCCCHHHHHH-------HhcCCcEEEEcCcccC-------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        111 NLESEHLGLSEDSEQL-------IKSKVNIIFHCAASLR-------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       111 D~~~~~~~~~~~~~~~-------~~~~~d~vi~~aa~~~-------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      |+.+.      +....       ....+|++++||+...       ..+.++..+++|+.++..+.+.+..
T Consensus        72 d~~~~------~~~~~~~~~~~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp  136 (269)
T d1xu9a_          72 TMEDM------TFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALP  136 (269)
T ss_dssp             CTTCH------HHHHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             hhhhH------HHHHHHHHHHHHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHH
Confidence            88876      33333       2346899999998753       2467778899999999998887643

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.40  E-value=2e-12  Score=96.69  Aligned_cols=115  Identities=17%  Similarity=0.145  Sum_probs=83.9

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHh---hCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEE
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLR---SFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVI  108 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~---~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  108 (177)
                      +.++||.++||||+++||.++++.|.+   .|   ++|++.+|++..  + +.+.+.+..          .....++.++
T Consensus         2 ~~L~gKvalITGas~GIG~aiA~~lA~~~~~G---~~Vv~~~r~~~~--l-~~~~~~l~~----------~~~~~~~~~~   65 (259)
T d1oaaa_           2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPG---SVMLVSARSESM--L-RQLKEELGA----------QQPDLKVVLA   65 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTT---CEEEEEESCHHH--H-HHHHHHHHH----------HCTTSEEEEE
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHhcccCC---CEEEEEECCHHH--H-HHHHHHHHh----------hcCCceEEEE
Confidence            347899999999999999999999986   56   699999986521  1 122211111          0012468889


Q ss_pred             eCCCCCCCCCCCHHHHHHHhc-----------CCcEEEEcCcccC----------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        109 PSNLESEHLGLSEDSEQLIKS-----------KVNIIFHCAASLR----------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       109 ~~D~~~~~~~~~~~~~~~~~~-----------~~d~vi~~aa~~~----------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      .+|++++      ++++++++           .+|+++||||...          ..+.|+..+++|+.++..+.+.+.+
T Consensus        66 ~~Dvs~~------~~v~~l~~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~  139 (259)
T d1oaaa_          66 AADLGTE------AGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLN  139 (259)
T ss_dssp             ECCTTSH------HHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             EccCCCH------HHHHHHHHHHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHH
Confidence            9999998      66666542           3579999998642          1367888999999999999998865


Q ss_pred             c
Q psy17489        168 C  168 (177)
Q Consensus       168 ~  168 (177)
                      .
T Consensus       140 ~  140 (259)
T d1oaaa_         140 A  140 (259)
T ss_dssp             T
T ss_pred             H
Confidence            4

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.34  E-value=4.7e-12  Score=95.58  Aligned_cols=109  Identities=17%  Similarity=0.278  Sum_probs=79.7

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      ++|+||||+||||++++++|++.|   ++|++++|+....... +.......            ...+++++.+|+.+. 
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G---~~V~~~~R~~~~~~~~-~~~~~~~~------------~~~~v~~v~~d~~d~-   66 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLG---HPTYVLFRPEVVSNID-KVQMLLYF------------KQLGAKLIEASLDDH-   66 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTT---CCEEEECCSCCSSCHH-HHHHHHHH------------HTTTCEEECCCSSCH-
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCC---CEEEEEECCCcccchh-HHHHHhhh------------ccCCcEEEEeecccc-
Confidence            469999999999999999999999   5899999976544322 11111110            125789999999998 


Q ss_pred             CCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCcee
Q psy17489        117 LGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCE  176 (177)
Q Consensus       117 ~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~  176 (177)
                           +.+...+.+++.++++++....        ..|..+..+++.+|.+. +..++|+
T Consensus        67 -----~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~a~~~-~~~~~v~  112 (312)
T d1qyda_          67 -----QRLVDALKQVDVVISALAGGVL--------SHHILEQLKLVEAIKEA-GNIKRFL  112 (312)
T ss_dssp             -----HHHHHHHTTCSEEEECCCCSSS--------STTTTTHHHHHHHHHHS-CCCSEEE
T ss_pred             -----hhhhhhccCcchhhhhhhhccc--------ccchhhhhHHHHHHHHh-cCCcEEE
Confidence                 7888899999999999986432        23455666788888887 4444443

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.32  E-value=9.6e-12  Score=93.21  Aligned_cols=107  Identities=18%  Similarity=0.297  Sum_probs=77.5

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      -|+||||||+||||+++++.|++.|   ++|++++|+........+.......            ....+.++.+|+.+.
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G---~~V~~l~R~~~~~~~~~~~~~~~~~------------~~~~~~~~~~d~~~~   67 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLG---HPTFLLVRESTASSNSEKAQLLESF------------KASGANIVHGSIDDH   67 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTT---CCEEEECCCCCTTTTHHHHHHHHHH------------HTTTCEEECCCTTCH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCC---CeEEEEECCCccccchhHHHHHHhh------------ccCCcEEEEeecccc
Confidence            3689999999999999999999999   5899999986554333332222110            125688999999998


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCcee
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCE  176 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~  176 (177)
                            ......+++++.++|+++.....            +..++++++... +++++++
T Consensus        68 ------~~~~~~~~~~~~vi~~~~~~~~~------------~~~~~~~a~~~~-~~~~~~~  109 (307)
T d1qyca_          68 ------ASLVEAVKNVDVVISTVGSLQIE------------SQVNIIKAIKEV-GTVKRFF  109 (307)
T ss_dssp             ------HHHHHHHHTCSEEEECCCGGGSG------------GGHHHHHHHHHH-CCCSEEE
T ss_pred             ------hhhhhhhhhceeeeecccccccc------------hhhHHHHHHHHh-cccccee
Confidence                  67888889999999999864332            233456677776 5666654

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.31  E-value=2.1e-11  Score=94.26  Aligned_cols=105  Identities=16%  Similarity=0.120  Sum_probs=78.3

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      .|+|+|||||||||+++++.|++.|   ++|+++.|+....    ....+.              ..++++++.+|+.+.
T Consensus         3 kktIlVtGatG~iG~~lv~~Ll~~G---~~V~~l~R~~~~~----~~~~~~--------------~~~~v~~~~gD~~d~   61 (350)
T d1xgka_           3 KKTIAVVGATGRQGASLIRVAAAVG---HHVRAQVHSLKGL----IAEELQ--------------AIPNVTLFQGPLLNN   61 (350)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTT---CCEEEEESCSCSH----HHHHHH--------------TSTTEEEEESCCTTC
T ss_pred             CCEEEEECCChHHHHHHHHHHHhCC---CeEEEEECCcchh----hhhhhc--------------ccCCCEEEEeeCCCc
Confidence            5799999999999999999999999   5899999976432    111111              225789999999986


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHHHhcCCCCCcee
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLAKECVNLKRFCE  176 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~  176 (177)
                      .     +.+..++.+++.++++.....         ..++....+++++|.+. +++++|+
T Consensus        62 ~-----~~~~~a~~~~~~~~~~~~~~~---------~~~~~~~~~~~~aa~~a-gv~~~v~  107 (350)
T d1xgka_          62 V-----PLMDTLFEGAHLAFINTTSQA---------GDEIAIGKDLADAAKRA-GTIQHYI  107 (350)
T ss_dssp             H-----HHHHHHHTTCSEEEECCCSTT---------SCHHHHHHHHHHHHHHH-SCCSEEE
T ss_pred             H-----HHHHHHhcCCceEEeeccccc---------chhhhhhhHHHHHHHHh-CCCceEE
Confidence            2     446778889999888765422         23455667889999988 7666654

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.28  E-value=3.2e-12  Score=91.44  Aligned_cols=86  Identities=16%  Similarity=0.170  Sum_probs=66.3

Q ss_pred             cccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489         31 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS  110 (177)
Q Consensus        31 ~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  110 (177)
                      ...++||+++||||+|+||..+++.|.+.|   .+|++++|+.+.  . +.+.+.+..             ..++....+
T Consensus        18 ~~~l~gK~vlItGasgGIG~~ia~~la~~G---~~V~~~~r~~~~--~-~~~~~~~~~-------------~~~~~~~~~   78 (191)
T d1luaa1          18 GGSVKGKKAVVLAGTGPVGMRSAALLAGEG---AEVVLCGRKLDK--A-QAAADSVNK-------------RFKVNVTAA   78 (191)
T ss_dssp             TSCCTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSHHH--H-HHHHHHHHH-------------HHTCCCEEE
T ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHhhc---cchhhcccchHH--H-HHHHHHHHh-------------ccchhhhhh
Confidence            345789999999999999999999999999   699999997521  1 111111110             124556788


Q ss_pred             CCCCCCCCCCHHHHHHHhcCCcEEEEcCccc
Q psy17489        111 NLESEHLGLSEDSEQLIKSKVNIIFHCAASL  141 (177)
Q Consensus       111 D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~~  141 (177)
                      |+.+.      +.++++++++|+||||||..
T Consensus        79 d~~~~------~~~~~~~~~iDilin~Ag~g  103 (191)
T d1luaa1          79 ETADD------ASRAEAVKGAHFVFTAGAIG  103 (191)
T ss_dssp             ECCSH------HHHHHHTTTCSEEEECCCTT
T ss_pred             hcccH------HHHHHHhcCcCeeeecCccc
Confidence            99988      78999999999999999864

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.27  E-value=1.9e-11  Score=90.03  Aligned_cols=106  Identities=12%  Similarity=0.103  Sum_probs=71.6

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      +||+++||||+|+||.++++.|.+.|   ++|+++++.+....                         .....+..|..+
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G---~~V~~~~~~~~~~~-------------------------~~~~~~~~~~~~   52 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARN---WWVASIDVVENEEA-------------------------SASVIVKMTDSF   52 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTT---CEEEEEESSCCTTS-------------------------SEEEECCCCSCH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCccccc-------------------------cccceeecccCc
Confidence            58999999999999999999999999   68998888653321                         122333444433


Q ss_pred             CC-CCCCHHHHHHHhc--CCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        115 EH-LGLSEDSEQLIKS--KVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       115 ~~-~~~~~~~~~~~~~--~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                      .. .......+...++  ++|++|||||...        ..+.|+..+++|+.++.++.+++.++
T Consensus        53 ~~~~~~~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  117 (236)
T d1dhra_          53 TEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKH  117 (236)
T ss_dssp             HHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHh
Confidence            21 0000011122222  5899999998521        13567888999999999999887653

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.27  E-value=4.3e-12  Score=94.51  Aligned_cols=115  Identities=11%  Similarity=-0.030  Sum_probs=76.9

Q ss_pred             eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC-
Q psy17489         38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH-  116 (177)
Q Consensus        38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-  116 (177)
                      +++||||+++||..+++.|++.|   ++|++.+|+.+..   ++++....                  .+..+|+.+.. 
T Consensus         2 TAlVTGas~GiG~aiA~~la~~G---a~V~i~~r~~~~~---~~~~~~~~------------------~~~~~dv~~~~~   57 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAG---HTVACHDESFKQK---DELEAFAE------------------TYPQLKPMSEQE   57 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTT---CEEEECCGGGGSH---HHHHHHHH------------------HCTTSEECCCCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCHHHH---HHHHhhhC------------------cEEEeccCCHHH
Confidence            78999999999999999999999   6899988875321   33332211                  12346776662 


Q ss_pred             CCCCHHHHHHHhcCCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHhc---CCCCCcee
Q psy17489        117 LGLSEDSEQLIKSKVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKEC---VNLKRFCE  176 (177)
Q Consensus       117 ~~~~~~~~~~~~~~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~  176 (177)
                      .....+.+.+.+.++|++|||||...        ..++|+..+++|+.+++++.+.+..+   .+-.++|+
T Consensus        58 ~~~~~~~~~~~~G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~  128 (252)
T d1zmta1          58 PAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIF  128 (252)
T ss_dssp             HHHHHHHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeec
Confidence            10001222233457999999998642        13678889999999999998876432   13345665

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.26  E-value=9.7e-12  Score=92.86  Aligned_cols=87  Identities=21%  Similarity=0.252  Sum_probs=69.5

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+||||||+||||++|+++|.+.|   +.|++++|++                                    .|+.|. 
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g---~~Vi~~~r~~------------------------------------~D~~d~-   41 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKN---VEVIPTDVQD------------------------------------LDITNV-   41 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSS---EEEEEECTTT------------------------------------CCTTCH-
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCC---CEEEEeechh------------------------------------ccCCCH-
Confidence            679999999999999999999998   5888887642                                    367776 


Q ss_pred             CCCCHHHHHHHhc--CCcEEEEcCcccCch---HHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        117 LGLSEDSEQLIKS--KVNIIFHCAASLRFD---EALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       117 ~~~~~~~~~~~~~--~~d~vi~~aa~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                           +.+.++++  ++|+|||+|+.....   .........|+.....+.+.+...
T Consensus        42 -----~~~~~~l~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~   93 (281)
T d1vl0a_          42 -----LAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSV   93 (281)
T ss_dssp             -----HHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             -----HHHHHHHHHcCCCEEEeeccccccccccccchhhcccccccccccccccccc
Confidence                 67777776  679999999986542   233456788888999988888775

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=7.9e-11  Score=87.10  Aligned_cols=108  Identities=19%  Similarity=0.285  Sum_probs=80.4

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .++||+++||||+++||.++++.|++.|   ++|++.+|+...  .++..+++                ..+......|+
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G---~~V~~~~r~~~~--~~~~~~~l----------------~~~~~~~~~~~   60 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQG---ASAVLLDLPNSG--GEAQAKKL----------------GNNCVFAPADV   60 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECTTSS--HHHHHHHH----------------CTTEEEEECCT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCChHH--HHHHHHHh----------------CCCcccccccc
Confidence            5789999999999999999999999999   689999997632  32322221                24667778888


Q ss_pred             CCCCCCCCHHHHHHH-------hcCCcEEEEcCcccC-------------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        113 ESEHLGLSEDSEQLI-------KSKVNIIFHCAASLR-------------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~-------~~~~d~vi~~aa~~~-------------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                      .+.      +..+..       ....|.++++++...             ..+.|+..+++|+.+++++.+++..
T Consensus        61 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~  129 (248)
T d2o23a1          61 TSE------KDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAG  129 (248)
T ss_dssp             TCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             ccc------ccccccccccccccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHH
Confidence            776      333322       235788888876532             1367888999999999999998754

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.24  E-value=3.5e-11  Score=88.46  Aligned_cols=105  Identities=14%  Similarity=0.206  Sum_probs=71.5

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      ..+|+||||+++||.+++++|++.|   ++|++++|++....                         .....+.+|+...
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G---~~V~~~~~~~~~~~-------------------------~~~~~~~~~~~~~   53 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNG---YTVLNIDLSANDQA-------------------------DSNILVDGNKNWT   53 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTT---EEEEEEESSCCTTS-------------------------SEEEECCTTSCHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCchhcc-------------------------cccceeccccCch
Confidence            3578999999999999999999999   69999999764311                         1233444555443


Q ss_pred             CC-CCCHHHHHHHh--cCCcEEEEcCcccC--------chHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        116 HL-GLSEDSEQLIK--SKVNIIFHCAASLR--------FDEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       116 ~~-~~~~~~~~~~~--~~~d~vi~~aa~~~--------~~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                      .. ....+.....+  .++|++|||||...        ..+.|+..+++|+.++..+.+++..+
T Consensus        54 ~~~~~~~~~~~~~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  117 (235)
T d1ooea_          54 EQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTH  117 (235)
T ss_dssp             HHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhcCCCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccc
Confidence            10 00001112222  36899999999632        13567778999999999999888653

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.14  E-value=2.6e-10  Score=85.32  Aligned_cols=85  Identities=13%  Similarity=0.147  Sum_probs=64.1

Q ss_pred             cCCCceEEEecCCc--chHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489         33 FYRDGQILVTGGTG--FMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS  110 (177)
Q Consensus        33 ~~~~~~vlVtG~~G--~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  110 (177)
                      +++||+++||||+|  +||.++++.|++.|   ++|++.+|++.   .++.+++...             ......+...
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~G---a~V~i~~r~~~---~~~~~~~l~~-------------~~~~~~~~~~   62 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQG---ATLAFTYLNES---LEKRVRPIAQ-------------ELNSPYVYEL   62 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTT---CEEEEEESSTT---THHHHHHHHH-------------HTTCCCEEEC
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCC---CEEEEEeCCHH---HHHHHHHHHh-------------hCCceeEeee
Confidence            57899999999876  89999999999999   69999999743   3344444333             2345667888


Q ss_pred             CCCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccC
Q psy17489        111 NLESEHLGLSEDSEQLIK-------SKVNIIFHCAASLR  142 (177)
Q Consensus       111 D~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~  142 (177)
                      |++++      +....++       ..+|++|||++...
T Consensus        63 d~~~~------~~~~~~~~~~~~~~g~id~lV~nag~~~   95 (274)
T d2pd4a1          63 DVSKE------EHFKSLYNSVKKDLGSLDFIVHSVAFAP   95 (274)
T ss_dssp             CTTCH------HHHHHHHHHHHHHTSCEEEEEECCCCCC
T ss_pred             cccch------hhHHHHHHHHHHHcCCCCeEEeeccccc
Confidence            99887      4444443       47899999999753

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.10  E-value=4.8e-10  Score=83.10  Aligned_cols=111  Identities=16%  Similarity=0.148  Sum_probs=79.5

Q ss_pred             cCCCceEEEecCCc--chHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489         33 FYRDGQILVTGGTG--FMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS  110 (177)
Q Consensus        33 ~~~~~~vlVtG~~G--~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  110 (177)
                      +++||+++||||+|  +||.++++.|++.|   ++|++.+|++..   .+.+.+...             ...+...+..
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G---~~V~i~~~~~~~---~~~~~~~~~-------------~~~~~~~~~~   62 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREG---AELAFTYQNDKL---KGRVEEFAA-------------QLGSDIVLQC   62 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTT---CEEEEEESSTTT---HHHHHHHHH-------------HTTCCCEEEC
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcC---CEEEEEeCCHHH---HHHHHHHHh-------------hcCCcceeec
Confidence            57899999999998  79999999999999   689999987532   233333322             1245667778


Q ss_pred             CCCCCCCCCCHHHHHHHh-------cCCcEEEEcCcccCc------------hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        111 NLESEHLGLSEDSEQLIK-------SKVNIIFHCAASLRF------------DEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       111 D~~~~~~~~~~~~~~~~~-------~~~d~vi~~aa~~~~------------~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                      |+.+.      .+....+       ...|+++|+|+....            .+.+...+.+|+.+...+.+.+...
T Consensus        63 ~~~~~------~~~~~~~~~~~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  133 (258)
T d1qsga_          63 DVAED------ASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSM  133 (258)
T ss_dssp             CTTCH------HHHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             ccchH------HHHHHHHHHhhhcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            88776      3444433       257999999987532            2335556788888888888887654

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.07  E-value=8.4e-11  Score=88.34  Aligned_cols=106  Identities=23%  Similarity=0.283  Sum_probs=66.8

Q ss_pred             EEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCCC
Q psy17489         39 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHLG  118 (177)
Q Consensus        39 vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~  118 (177)
                      ||||||+||||++|++.|++.|+  ..|+++++-.....    ..++..               ..    ..|..+..  
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~--~~V~~~d~~~~~~~----~~~~~~---------------~~----~~~~~~~~--   54 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGI--TDILVVDNLKDGTK----FVNLVD---------------LN----IADYMDKE--   54 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTC--CCEEEEECCSSGGG----GHHHHT---------------SC----CSEEEEHH--
T ss_pred             EEEecCccHHHHHHHHHHHhCCC--CeEEEEECCCCcch----hhcccc---------------cc----hhhhccch--
Confidence            89999999999999999999985  46888764332211    111111               00    11111110  


Q ss_pred             CCHHHHHHH-----hcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCce
Q psy17489        119 LSEDSEQLI-----KSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKECVNLKRFC  175 (177)
Q Consensus       119 ~~~~~~~~~-----~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v  175 (177)
                         +.....     +..+++++|.|+.... ..........|+.++.+++++++.. +++.++
T Consensus        55 ---~~~~~~~~~~~~~~~~~i~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~i~~v~  113 (307)
T d1eq2a_          55 ---DFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EIPFLY  113 (307)
T ss_dssp             ---HHHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TCCEEE
T ss_pred             ---HHHHHHhhhhcccchhhhhhhcccccccccccccccccccccccccccccccc-cccccc
Confidence               112222     2367899999986543 2344556788999999999999987 775443

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.06  E-value=1.1e-09  Score=81.50  Aligned_cols=110  Identities=13%  Similarity=0.148  Sum_probs=75.9

Q ss_pred             cCCCceEEEecCC--cchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489         33 FYRDGQILVTGGT--GFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS  110 (177)
Q Consensus        33 ~~~~~~vlVtG~~--G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  110 (177)
                      +++||+++||||+  .+||.++++.|++.|   ++|+..+|++      ++..+...+           ....+...+.+
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~G---a~Vil~~~~~------~~~~~~~~~-----------~~~~~~~~~~~   62 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQG---AQLVLTGFDR------LRLIQRITD-----------RLPAKAPLLEL   62 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTT---CEEEEEECSC------HHHHHHHHT-----------TSSSCCCEEEC
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcC---CEEEEEeCCh------HHHHHHHHH-----------HcCCceeeEee
Confidence            5789999999964  479999999999999   6899988865      222221111           12356778899


Q ss_pred             CCCCCCCCCCHHHHHHH-------h---cCCcEEEEcCcccCc------------hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        111 NLESEHLGLSEDSEQLI-------K---SKVNIIFHCAASLRF------------DEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       111 D~~~~~~~~~~~~~~~~-------~---~~~d~vi~~aa~~~~------------~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                      |+.++      ++...+       +   ..+|+++|++++...            ...+...+..|........+.+...
T Consensus        63 dv~~~------~~~~~~~~~v~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  136 (268)
T d2h7ma1          63 DVQNE------EHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPI  136 (268)
T ss_dssp             CTTCH------HHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             ecccc------cccccccchhhhccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhh
Confidence            99987      333332       2   247999999996421            2345556777887777777766553

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.00  E-value=3.9e-09  Score=79.50  Aligned_cols=133  Identities=12%  Similarity=0.015  Sum_probs=75.7

Q ss_pred             cccCCCceEEEecCCc--chHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcc-cCCCeEE
Q psy17489         31 DDFYRDGQILVTGGTG--FMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPD-FRSKIQV  107 (177)
Q Consensus        31 ~~~~~~~~vlVtG~~G--~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~  107 (177)
                      +-.++||+++||||+|  +||.++++.|++.|   ++|++.+|++...........  ......++..+... ...++..
T Consensus         3 ~~~L~gK~alVTGass~~GIG~aiA~~la~~G---a~Vvi~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~   77 (297)
T d1d7oa_           3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAG---AEILVGTWVPALNIFETSLRR--GKFDQSRVLPDGSLMEIKKVYP   77 (297)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTT---CEEEEEEEHHHHHHHHHHHHT--TTTTGGGBCTTSSBCCEEEEEE
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCC---CEEEEEeCchhhhhhHHHHHH--hhhhhhhhhhhhhhhhhhhhhh
Confidence            3347999999999887  89999999999999   789988886421100000000  00011111110000 0011222


Q ss_pred             EeCCCCCCCCC----------------C---CHHHHHHHhcCCcEEEEcCcccC---------chHHHHHHHHHhHHHHH
Q psy17489        108 IPSNLESEHLG----------------L---SEDSEQLIKSKVNIIFHCAASLR---------FDEALQKAIRANLYATK  159 (177)
Q Consensus       108 ~~~D~~~~~~~----------------~---~~~~~~~~~~~~d~vi~~aa~~~---------~~~~~~~~~~~nv~~~~  159 (177)
                      +..++.+....                .   ..+.+.+.+.++|++|||||...         ..+.|...+++|+.+..
T Consensus        78 ~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~  157 (297)
T d1d7oa_          78 LDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFV  157 (297)
T ss_dssp             ECTTCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHH
T ss_pred             hhhhccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhh
Confidence            22222221100                0   01222333558999999998632         13568889999999999


Q ss_pred             HHHHHHHhc
Q psy17489        160 QMLNLAKEC  168 (177)
Q Consensus       160 ~ll~~~~~~  168 (177)
                      .+.+.+...
T Consensus       158 ~~~~~~~~~  166 (297)
T d1d7oa_         158 SLLSHFLPI  166 (297)
T ss_dssp             HHHHHHGGG
T ss_pred             hhhhHHHHH
Confidence            999987654

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=98.91  E-value=1.4e-08  Score=75.80  Aligned_cols=109  Identities=13%  Similarity=0.108  Sum_probs=69.8

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEe-------
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIP-------  109 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-------  109 (177)
                      -.++||||+++||.++++.|++.|   ++|++.+++...  ..+.+.+.+...           .......++       
T Consensus         3 pVAlITGas~GIG~aiA~~la~~G---a~V~i~~~~~~~--~~~~~~~~l~~~-----------~~~~~~~~~~d~~~~~   66 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEG---YAVCLHYHRSAA--EANALSATLNAR-----------RPNSAITVQADLSNVA   66 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHH--HHHHHHHHHHHH-----------STTCEEEEECCCSSSC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEeCCCHH--HHHHHHHHHHhh-----------cCCceEEEEeeccccc
Confidence            368999999999999999999999   688887776421  112222222110           112333444       


Q ss_pred             ----------CCCCCCCCCCCHHHHHHH-------hcCCcEEEEcCcccCc-------h--------------HHHHHHH
Q psy17489        110 ----------SNLESEHLGLSEDSEQLI-------KSKVNIIFHCAASLRF-------D--------------EALQKAI  151 (177)
Q Consensus       110 ----------~D~~~~~~~~~~~~~~~~-------~~~~d~vi~~aa~~~~-------~--------------~~~~~~~  151 (177)
                                +|+++.      ++++++       +.++|++|||||....       .              ..+...+
T Consensus        67 ~~~~~~~~~~~dv~~~------~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (284)
T d1e7wa_          67 TAPVSGADGSAPVTLF------TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLF  140 (284)
T ss_dssp             BCCCC----CCCBCHH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHH
T ss_pred             ccccccccccccCCCH------HHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHH
Confidence                      445544      445444       3479999999997531       0              1123467


Q ss_pred             HHhHHHHHHHHHHHHh
Q psy17489        152 RANLYATKQMLNLAKE  167 (177)
Q Consensus       152 ~~nv~~~~~ll~~~~~  167 (177)
                      .+|+.++..+.+.+.+
T Consensus       141 ~~n~~~~~~~~~~~~~  156 (284)
T d1e7wa_         141 GSNAIAPYFLIKAFAH  156 (284)
T ss_dssp             HHHTHHHHHHHHHHHH
T ss_pred             hhheeeeeeeeccccc
Confidence            8899999999887644

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=98.88  E-value=9.2e-09  Score=75.79  Aligned_cols=89  Identities=11%  Similarity=0.156  Sum_probs=65.2

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +|.|+||||+++||.++++.|++.|   ++|++.+|++..                                ...|+.+.
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~G---a~V~~~~~~~~~--------------------------------~~~d~~~~   45 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAG---HQIVGIDIRDAE--------------------------------VIADLSTA   45 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSSSS--------------------------------EECCTTSH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECChHH--------------------------------HHHHhcCH
Confidence            5789999999999999999999999   689999986521                                12344433


Q ss_pred             CCCCCHHHHHH----H----hcCCcEEEEcCcccCchHHHHHHHHHhHHHHHHHHHHH
Q psy17489        116 HLGLSEDSEQL----I----KSKVNIIFHCAASLRFDEALQKAIRANLYATKQMLNLA  165 (177)
Q Consensus       116 ~~~~~~~~~~~----~----~~~~d~vi~~aa~~~~~~~~~~~~~~nv~~~~~ll~~~  165 (177)
                            .....    .    .+.+|.++++|+.......+.....+|..+...+.+..
T Consensus        46 ------~~~~~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (257)
T d1fjha_          46 ------EGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAF   97 (257)
T ss_dssp             ------HHHHHHHHHHHTTCTTCCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHH
T ss_pred             ------HHHHHHHHHHHHHhCCCCcEEEEcCCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence                  11111    1    13589999999987666677777888888877776654

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=98.86  E-value=1.9e-08  Score=73.24  Aligned_cols=96  Identities=18%  Similarity=0.196  Sum_probs=70.0

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +|+++||||+++||.++++.|++.|   ++|++.+|+++.                           .+....++|+.+.
T Consensus         1 DK~alITGas~GIG~aiA~~la~~G---a~V~i~~~~~~~---------------------------~~~~~~~~d~~~~   50 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARG---YRVVVLDLRREG---------------------------EDLIYVEGDVTRE   50 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHT---CEEEEEESSCCS---------------------------SSSEEEECCTTCH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCccc---------------------------ccceEeeccccch
Confidence            4899999999999999999999999   699999987642                           3456778898876


Q ss_pred             CCCCCHHHHHHHhc------CCcEEEEcCcccC-----------chHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        116 HLGLSEDSEQLIKS------KVNIIFHCAASLR-----------FDEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       116 ~~~~~~~~~~~~~~------~~d~vi~~aa~~~-----------~~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                            .....+..      ..+.++++++...           ..+.++..+++|+.+...+.+.+..
T Consensus        51 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  113 (241)
T d1uaya_          51 ------EDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAW  113 (241)
T ss_dssp             ------HHHHHHHHHHHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             ------hhhHHHHHhhhccccccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHH
Confidence                  33333322      3455555555321           2356778899999999888876643

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=98.84  E-value=1.2e-08  Score=78.34  Aligned_cols=127  Identities=13%  Similarity=0.082  Sum_probs=74.2

Q ss_pred             CCceEEEec--CCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhh-hhhcccccCcccCCCeEEEeCC
Q psy17489         35 RDGQILVTG--GTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSV-IFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        35 ~~~~vlVtG--~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      ++|.+||||  ++++||..+++.|.+.|   ++|++.++.....   .......... ..+.+.. ............+|
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~G---A~V~i~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~   73 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRN---VKIIFGIWPPVYN---IFMKNYKNGKFDNDMIID-KDKKMNILDMLPFD   73 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTT---CEEEEEECGGGHH---HHHHHHHTTTTTGGGEET-TTEECCEEEEEECC
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcC---CEEEEEeCchhhh---hhhHHHHHHhhhhHHHHH-HHhhhhhhhccccc
Confidence            468999999  55799999999999999   7888887754211   1111111111 1111100 00011112333343


Q ss_pred             CC--------------------CCC-CCCCHHHHHHHhcCCcEEEEcCcccC---------chHHHHHHHHHhHHHHHHH
Q psy17489        112 LE--------------------SEH-LGLSEDSEQLIKSKVNIIFHCAASLR---------FDEALQKAIRANLYATKQM  161 (177)
Q Consensus       112 ~~--------------------~~~-~~~~~~~~~~~~~~~d~vi~~aa~~~---------~~~~~~~~~~~nv~~~~~l  161 (177)
                      +.                    +.. .....+.+.+.+.++|++||+||...         ..++|...+++|+.++..+
T Consensus        74 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~  153 (329)
T d1uh5a_          74 ASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISL  153 (329)
T ss_dssp             TTCSSGGGCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHH
T ss_pred             ceehhhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHH
Confidence            32                    221 00001222334568999999998642         1367888999999999999


Q ss_pred             HHHHHhc
Q psy17489        162 LNLAKEC  168 (177)
Q Consensus       162 l~~~~~~  168 (177)
                      .+.+.++
T Consensus       154 ~k~~~~~  160 (329)
T d1uh5a_         154 CKYFVNI  160 (329)
T ss_dssp             HHHHGGG
T ss_pred             HHHHHhh
Confidence            9988764

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=98.80  E-value=4.7e-08  Score=72.15  Aligned_cols=112  Identities=14%  Similarity=0.160  Sum_probs=70.1

Q ss_pred             eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCC
Q psy17489         38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHL  117 (177)
Q Consensus        38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~  117 (177)
                      +++||||+++||.++++.|++.|   ++|+..+|+...  ..+++.+.+..           ....+....+.|+.+...
T Consensus         3 vAlVTGas~GIG~aia~~la~~G---~~Vvi~~r~~~~--~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~   66 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQG---FRVVVHYRHSEG--AAQRLVAELNA-----------ARAGSAVLCKGDLSLSSS   66 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHH--HHHHHHHHHHH-----------HSTTCEEEEECCCSSSTT
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCchH--HHHHHHHHHHh-----------hcCCceEEEecccccchh
Confidence            68999999999999999999999   699999987531  11222221111           022456667766655421


Q ss_pred             CCCHHHHHH-------HhcCCcEEEEcCcccCc------------------hHHHHHHHHHhHHHHHHHHHHHHh
Q psy17489        118 GLSEDSEQL-------IKSKVNIIFHCAASLRF------------------DEALQKAIRANLYATKQMLNLAKE  167 (177)
Q Consensus       118 ~~~~~~~~~-------~~~~~d~vi~~aa~~~~------------------~~~~~~~~~~nv~~~~~ll~~~~~  167 (177)
                        ..+.+..       .++++|++|||||....                  ...+...+..|..+..........
T Consensus        67 --~~~~~~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (266)
T d1mxha_          67 --LLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFAR  139 (266)
T ss_dssp             --HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             --HHHHHHHHHHHHHHHhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhcc
Confidence              1122222       23479999999996431                  123344567777776666665544

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=98.06  E-value=3.1e-05  Score=52.03  Aligned_cols=114  Identities=9%  Similarity=0.118  Sum_probs=69.6

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      .+.++|.|.|+ |.+|..++..|+..|. +.+++.+++++..  .+-...++..     ..     ..........+|..
T Consensus         3 ~~~~KI~IIGa-G~VG~~~A~~l~~~~~-~~elvL~D~~~~~--~~g~a~Dl~~-----a~-----~~~~~~~~~~~d~~   68 (146)
T d1ez4a1           3 PNHQKVVLVGD-GAVGSSYAFAMAQQGI-AEEFVIVDVVKDR--TKGDALDLED-----AQ-----AFTAPKKIYSGEYS   68 (146)
T ss_dssp             TTBCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSHHH--HHHHHHHHHG-----GG-----GGSCCCEEEECCGG
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcCC-CcEEEEeecccch--hHHHHHHHhc-----cc-----cccCCceEeeccHH
Confidence            35679999995 9999999999999874 4689999886421  1111111110     00     01123344444433


Q ss_pred             CCCCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCce
Q psy17489        114 SEHLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKECVNLKRFC  175 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v  175 (177)
                      +             ++++|+|+.+||.... .++..+.++.|+.....+.+...++ +.+-++
T Consensus        69 ~-------------~~~adivvitag~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~-~p~aiv  117 (146)
T d1ez4a1          69 D-------------CKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDS-GFDGIF  117 (146)
T ss_dssp             G-------------GTTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHT-TCCSEE
T ss_pred             H-------------hccccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhhc-CCCcEE
Confidence            2             4788999999986432 3445567889999999999988887 555544

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.06  E-value=1.4e-05  Score=52.59  Aligned_cols=73  Identities=16%  Similarity=0.132  Sum_probs=55.1

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+|+|.|+ |.+|+.+++.|.+.|   ..|+++++++      +++.+...+              .....+.+|.+++ 
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g---~~v~vid~d~------~~~~~~~~~--------------~~~~vi~Gd~~~~-   55 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKG---HDIVLIDIDK------DICKKASAE--------------IDALVINGDCTKI-   55 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESCH------HHHHHHHHH--------------CSSEEEESCTTSH-
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCC---CCcceecCCh------hhhhhhhhh--------------hhhhhccCcccch-
Confidence            68999996 999999999999998   5889988865      344433221              2567899999998 


Q ss_pred             CCCCHHHHHHH-hcCCcEEEEcCc
Q psy17489        117 LGLSEDSEQLI-KSKVNIIFHCAA  139 (177)
Q Consensus       117 ~~~~~~~~~~~-~~~~d~vi~~aa  139 (177)
                           +.+..+ ++.++.++-+..
T Consensus        56 -----~~l~~~~i~~a~~vv~~t~   74 (132)
T d1lssa_          56 -----KTLEDAGIEDADMYIAVTG   74 (132)
T ss_dssp             -----HHHHHTTTTTCSEEEECCS
T ss_pred             -----hhhhhcChhhhhhhcccCC
Confidence                 566665 467888887643

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.00  E-value=5.3e-05  Score=50.77  Aligned_cols=115  Identities=10%  Similarity=0.104  Sum_probs=71.5

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEE--EeCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQV--IPSNLES  114 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~D~~~  114 (177)
                      |+|.|+||+|.+|.+++..|...|. +.++..+++++....++-...++.. ..        .....++..  ...+  +
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l-~~el~L~D~~~~~~~~~g~a~Dl~~-~~--------~~~~~~~~~~~~~~~--d   68 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPF-MKDLVLIGREHSINKLEGLREDIYD-AL--------AGTRSDANIYVESDE--N   68 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTT-CCEEEEEECGGGHHHHHHHHHHHHH-HH--------TTSCCCCEEEEEETT--C
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCc-ccccccccchhhhHhhhcccccchh-cc--------cccccCCccccCCcc--h
Confidence            5799999999999999999988863 4688888876432111111111111 00        001122222  2221  1


Q ss_pred             CCCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCc
Q psy17489        115 EHLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKECVNLKRF  174 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~  174 (177)
                      .          ..++++|+||-+||.... .++-.+.++.|..-...+.+...++ ..+.+
T Consensus        69 ~----------~~l~~aDvVVitAG~~~~~g~sR~dl~~~Na~iv~~i~~~i~~~-~~~~i  118 (145)
T d1hyea1          69 L----------RIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEI-CDTKI  118 (145)
T ss_dssp             G----------GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CCCEE
T ss_pred             H----------HHhccceEEEEecccccCCCCChhhhhhhhHHHHHHHHHHHhcc-CCCeE
Confidence            1          135789999999996432 3455678899999999999988877 44443

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.99  E-value=2.9e-05  Score=52.03  Aligned_cols=111  Identities=10%  Similarity=0.036  Sum_probs=72.6

Q ss_pred             eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCC
Q psy17489         38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHL  117 (177)
Q Consensus        38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~  117 (177)
                      +|.|+||+|.+|++++..|...|. +.+++.++.++    .+-...++..           .   ..+.....-+..   
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~-~~elvLiDi~~----~~~~a~Dl~~-----------~---~~~~~~~~~~~~---   59 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPL-VSRLTLYDIAH----TPGVAADLSH-----------I---ETRATVKGYLGP---   59 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTT-CSEEEEEESSS----HHHHHHHHTT-----------S---SSSCEEEEEESG---
T ss_pred             eEEEECCCChHHHHHHHHHHhCCc-cceEEEEeccc----cchhhHHHhh-----------h---hhhcCCCeEEcC---
Confidence            689999999999999999988864 56888888643    1111111110           0   011111111111   


Q ss_pred             CCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCce
Q psy17489        118 GLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKECVNLKRFC  175 (177)
Q Consensus       118 ~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v  175 (177)
                          .+..+.++++|+||..||.... .++..+.++.|+.....+++.+.++ +.+-++
T Consensus        60 ----~~~~~~~~~aDivVitag~~~~~g~sR~~ll~~N~~i~~~i~~~i~~~-~p~~ii  113 (144)
T d1mlda1          60 ----EQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQH-CPDAMI  113 (144)
T ss_dssp             ----GGHHHHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTSEE
T ss_pred             ----CChHHHhCCCCEEEECCCcCCCCCCCcchHHHHHHHHHHHHHHHHHhc-CCCeEE
Confidence                3456677999999999996432 2344557899999999999999887 555444

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.96  E-value=7.4e-05  Score=50.85  Aligned_cols=75  Identities=16%  Similarity=0.197  Sum_probs=51.4

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      +|+|+|.|| |++|+++++.|.+.|   +.|++.+|+.      ++..++..             ..+.......+....
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g---~~V~v~dr~~------~~a~~l~~-------------~~~~~~~~~~~~~~~   58 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSG---IKVTVACRTL------ESAKKLSA-------------GVQHSTPISLDVNDD   58 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTT---CEEEEEESCH------HHHHHHHT-------------TCTTEEEEECCTTCH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCC---CEEEEEECCh------HHHHHHHh-------------cccccccccccccch
Confidence            689999986 999999999999998   5899999976      33333322             123344444444443


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCc
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAA  139 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa  139 (177)
                            ......+...|.++....
T Consensus        59 ------~~~~~~i~~~~~~i~~~~   76 (182)
T d1e5qa1          59 ------AALDAEVAKHDLVISLIP   76 (182)
T ss_dssp             ------HHHHHHHTTSSEEEECSC
T ss_pred             ------hhhHhhhhccceeEeecc
Confidence                  455666677787776654

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.93  E-value=5e-05  Score=50.89  Aligned_cols=112  Identities=13%  Similarity=0.065  Sum_probs=69.0

Q ss_pred             ceEEEecCCcchHHHHHHHHHhh-CCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRS-FPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~-g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      |+|.|+|++|.+|++++..|..+ + -...+..++..+   ...-...++..           .........+. . +  
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~-~~~el~L~D~~~---~~~g~a~Dl~h-----------~~~~~~~~~~~-~-~--   61 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLP-SGSELSLYDIAP---VTPGVAVDLSH-----------IPTAVKIKGFS-G-E--   61 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSC-TTCEEEEECSST---THHHHHHHHHT-----------SCSSCEEEEEC-S-S--
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCC-CCcEEEEecccc---cchhHHHHHHC-----------CccccCCcEEE-c-C--
Confidence            58999999999999999888654 3 346788887643   12222222111           00011112221 1 1  


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCcccC-chHHHHHHHHHhHHHHHHHHHHHHhcCCCCCce
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAASLR-FDEALQKAIRANLYATKQMLNLAKECVNLKRFC  175 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~-~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v  175 (177)
                            ..++ .+++.|+||-+||... ..++-.+.++.|......+.+...++ ..+.+|
T Consensus        62 ------~~~~-~~~~aDvvvitaG~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~-~p~aiv  114 (145)
T d2cmda1          62 ------DATP-ALEGADVVLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKT-CPKACI  114 (145)
T ss_dssp             ------CCHH-HHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTSEE
T ss_pred             ------CCcc-ccCCCCEEEECCCccCCCCcchhhHHHHHHHHHHHHHHHHHhh-CCCcEE
Confidence                  1223 5689999999999643 23344557899999999999998887 555443

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.87  E-value=8.9e-05  Score=49.44  Aligned_cols=113  Identities=12%  Similarity=0.085  Sum_probs=71.6

Q ss_pred             eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCC
Q psy17489         38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHL  117 (177)
Q Consensus        38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~  117 (177)
                      +|.|+||+|.+|.+++..|..++. +.+++.++........+-...++..     -.    . ...+.....+|..+   
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l-~~el~L~Di~~~~~~~~g~a~Dl~~-----~~----~-~~~~~~i~~~~~~~---   67 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDI-ADEVVFVDIPDKEDDTVGQAADTNH-----GI----A-YDSNTRVRQGGYED---   67 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-CSEEEEECCGGGHHHHHHHHHHHHH-----HH----T-TTCCCEEEECCGGG---
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCC-CCEEEEEecCCcccccceeecchhh-----cc----c-ccCCceEeeCCHHH---
Confidence            689999999999999999998874 4578887753211111111111110     00    0 11233334444322   


Q ss_pred             CCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCce
Q psy17489        118 GLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKECVNLKRFC  175 (177)
Q Consensus       118 ~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v  175 (177)
                                ++++|+|+-.||.... .++-.+.++.|..-...+.+...++ +.+-++
T Consensus        68 ----------~~~aDiVvitaG~~~~~g~~R~dl~~~N~~I~~~i~~~i~~~-~p~~i~  115 (142)
T d1o6za1          68 ----------TAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEH-NDDYIS  115 (142)
T ss_dssp             ----------GTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTT-CSCCEE
T ss_pred             ----------hhhcCEEEEecccccccCCchhhHHHHHHHHHHHHHHHHHhc-CCCceE
Confidence                      3689999999996432 3456678899999999999999887 544443

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=97.79  E-value=0.00012  Score=48.84  Aligned_cols=110  Identities=11%  Similarity=0.119  Sum_probs=67.3

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      ++|.|+|+ |.+|+.++..|+..+. +.+++.+++.++....  +..++..          ............+|..   
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l-~~el~L~D~~~~~~~g--~a~Dl~~----------~~~~~~~~~~~~~~~~---   64 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQT-ANELVLIDVFKEKAIG--EAMDINH----------GLPFMGQMSLYAGDYS---   64 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTC-SSEEEEECCC---CCH--HHHHHTT----------SCCCTTCEEEC--CGG---
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEeccCCccce--eeeeecc----------CcccCCCeeEeeCcHH---
Confidence            36888896 9999999999998874 5689999987653322  1112110          0011122332222221   


Q ss_pred             CCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCc
Q psy17489        117 LGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKECVNLKRF  174 (177)
Q Consensus       117 ~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~  174 (177)
                                .++++|+|+-+||.... .++..+.++.|+.-...+.+...++ +.+-+
T Consensus        65 ----------~~~~adivvitag~~~~~~~~r~~l~~~N~~i~~~i~~~i~~~-~p~ai  112 (142)
T d1y6ja1          65 ----------DVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKY-YNHGV  112 (142)
T ss_dssp             ----------GGTTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHH-CCSCE
T ss_pred             ----------HhCCCceEEEecccccCcCcchhHHhhHHHHHHHHHHHHhhcc-CCCce
Confidence                      35788999999996532 3455567899999999999998887 44443

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.72  E-value=0.00011  Score=49.20  Aligned_cols=112  Identities=6%  Similarity=0.113  Sum_probs=68.1

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+|.|+|+ |.+|+.++..|+..|. +.+++.+++++..  ++-...++..     -.    .....+......|..+  
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~-~~elvL~Di~~~~--~~g~~~Dl~~-----a~----~~~~~~~~~~~~d~~~--   66 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGV-ADDYVFIDANEAK--VKADQIDFQD-----AM----ANLEAHGNIVINDWAA--   66 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSHHH--HHHHHHHHHH-----HG----GGSSSCCEEEESCGGG--
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCC-CceEEEEecccch--hhhHHHhhhc-----cc----cccCCccceeccCHHH--
Confidence            68999995 9999999999999873 4688888875421  1111111111     00    0011233334444332  


Q ss_pred             CCCCHHHHHHHhcCCcEEEEcCcccCc-----hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCce
Q psy17489        117 LGLSEDSEQLIKSKVNIIFHCAASLRF-----DEALQKAIRANLYATKQMLNLAKECVNLKRFC  175 (177)
Q Consensus       117 ~~~~~~~~~~~~~~~d~vi~~aa~~~~-----~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v  175 (177)
                                 ++++|+||-+||....     .++-.+.++.|..-...+.+...++ ..+-++
T Consensus        67 -----------l~~adiVVitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~-~p~aiv  118 (146)
T d1hyha1          67 -----------LADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKES-GFHGVL  118 (146)
T ss_dssp             -----------GTTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHT-TCCSEE
T ss_pred             -----------hccccEEEEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhc-CCCeEE
Confidence                       4788999999996432     1222345788999999999888887 555444

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.69  E-value=0.00026  Score=47.41  Aligned_cols=113  Identities=10%  Similarity=0.190  Sum_probs=71.1

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      .+++|.|+|+ |.+|++++..|+..|. +.++..+++.++.  ++-...++..     . .   ......+.....|..+
T Consensus         5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l-~~el~L~Di~~~~--~~g~a~Dl~~-----~-~---~~~~~~~~~~~~d~~~   71 (148)
T d1ldna1           5 GGARVVVIGA-GFVGASYVFALMNQGI-ADEIVLIDANESK--AIGDAMDFNH-----G-K---VFAPKPVDIWHGDYDD   71 (148)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSHHH--HHHHHHHHHH-----H-T---TSSSSCCEEEECCGGG
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHhcCC-CceEEEEeecccc--ccchhccHhh-----C-c---cccCCCeEEEECCHHH
Confidence            4678999996 9999999999999875 4688888876421  1111111110     0 0   0011233444444332


Q ss_pred             CCCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCc
Q psy17489        115 EHLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKECVNLKRF  174 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~  174 (177)
                                   ++++|++|.+++.... .++..+.+..|+.-...+.+...++ ..+-+
T Consensus        72 -------------l~daDvvvitag~~~~~~~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~  118 (148)
T d1ldna1          72 -------------CRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMAS-GFQGL  118 (148)
T ss_dssp             -------------TTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHH-TCCSE
T ss_pred             -------------hccceeEEEecccccccCcchhHHHHHHHHHHHHHHHHHHhh-CCCce
Confidence                         4688999999987542 2333456788998888888888876 44443

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.61  E-value=0.00047  Score=45.60  Aligned_cols=111  Identities=14%  Similarity=0.119  Sum_probs=70.1

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |++.|.|+ |.+|++++..|+..+. +.++..++++++.  ++-...++..     .     .....+......|..   
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l-~~el~L~Di~~~~--~~g~~~Dl~~-----~-----~~~~~~~~~~~~~~~---   63 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGF-AREMVLIDVDKKR--AEGDALDLIH-----G-----TPFTRRANIYAGDYA---   63 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSHHH--HHHHHHHHHH-----H-----GGGSCCCEEEECCGG---
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCC-CCEEEEEeccccc--ccchhccccc-----c-----ccccccccccCCcHH---
Confidence            57889996 8999999999998874 4688888876421  1111111111     0     001123344444322   


Q ss_pred             CCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCce
Q psy17489        117 LGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKECVNLKRFC  175 (177)
Q Consensus       117 ~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v  175 (177)
                                .++++|+|+-+||.... .++..+.+..|..-...+.+...++ ..+-++
T Consensus        64 ----------~~~~adivvitag~~~~~g~~r~dl~~~N~~I~~~i~~~i~~~-~p~aiv  112 (140)
T d1a5za1          64 ----------DLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKY-APDSIV  112 (140)
T ss_dssp             ----------GGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEE
T ss_pred             ----------HhcCCCEEEEecccccCCCcchhhhhccccchHHHHHHHHHhc-CCCcEE
Confidence                      24788999999997543 3444567788988888888888876 444444

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.61  E-value=0.00034  Score=48.13  Aligned_cols=112  Identities=13%  Similarity=0.058  Sum_probs=67.6

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhC---CCc-CeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCccc-CCCeEEE
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSF---PDI-GAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDF-RSKIQVI  108 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g---~~~-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~  108 (177)
                      .+..+|.|+||+|.||++++..|...+   .+. ..+..++..+..    ..+.....+         ..+. .+....+
T Consensus        22 k~~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~----~~l~g~~md---------l~d~a~~~~~~~   88 (175)
T d7mdha1          22 KKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSF----QALEGVAME---------LEDSLYPLLREV   88 (175)
T ss_dssp             CCCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGH----HHHHHHHHH---------HHTTTCTTEEEE
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCcccc----chhcchhhh---------hcccccccccCc
Confidence            345689999999999999999998642   111 133344433211    112211100         0000 1112111


Q ss_pred             eCCCCCCCCCCCHHHHHHHhcCCcEEEEcCcccC-chHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        109 PSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLR-FDEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       109 ~~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~-~~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                      .  ..        ....+.++++|+||-.+|... ..++..+.++.|......+.+.+.++
T Consensus        89 ~--~~--------~~~~~~~~~aDvVvi~ag~~rkpg~tR~Dll~~N~~I~k~~~~~i~~~  139 (175)
T d7mdha1          89 S--IG--------IDPYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAV  139 (175)
T ss_dssp             E--EE--------SCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             c--cc--------ccchhhccCCceEEEeeccCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence            1  11        123556789999999998753 34667778999999999999999886

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.61  E-value=4.4e-05  Score=52.50  Aligned_cols=34  Identities=29%  Similarity=0.302  Sum_probs=30.8

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      |+|.|+||+|.+|++|++.|++.|   ++|.+.+|++
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G---~~V~l~~R~~   34 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLG---HEIVVGSRRE   34 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTT---CEEEEEESSH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCC---CEEEEEECCH
Confidence            578899999999999999999999   6899999975

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.59  E-value=0.00018  Score=49.71  Aligned_cols=86  Identities=9%  Similarity=0.029  Sum_probs=56.3

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      .+++++++|.|+ |+.|++++..|.+.|.  ..+++..|+....   +++..+.++.. +        . -.......|+
T Consensus        15 ~l~~k~vlIlGa-GGaarai~~al~~~g~--~~i~i~nR~~~~~---~~~~~l~~~~~-~--------~-~~~~~~~~~~   78 (182)
T d1vi2a1          15 DIKGKTMVLLGA-GGASTAIGAQGAIEGL--KEIKLFNRRDEFF---DKALAFAQRVN-E--------N-TDCVVTVTDL   78 (182)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEEECSSTTH---HHHHHHHHHHH-H--------H-SSCEEEEEET
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHhhcCC--ceEeeeccchHHH---HHHHHHHHHHH-h--------h-cCcceEeeec
Confidence            357899999996 7789999999999874  7899999876432   22222211100 0        0 1223334566


Q ss_pred             CCCCCCCCHHHHHHHhcCCcEEEEcCcc
Q psy17489        113 ESEHLGLSEDSEQLIKSKVNIIFHCAAS  140 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~d~vi~~aa~  140 (177)
                      .+.      +.+......+|+|||+-..
T Consensus        79 ~~~------~~~~~~~~~~diiIN~Tp~  100 (182)
T d1vi2a1          79 ADQ------QAFAEALASADILTNGTKV  100 (182)
T ss_dssp             TCH------HHHHHHHHTCSEEEECSST
T ss_pred             ccc------cchhhhhcccceeccccCC
Confidence            665      5667777888999999754

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.58  E-value=0.00063  Score=45.66  Aligned_cols=114  Identities=12%  Similarity=0.076  Sum_probs=65.7

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcC--eEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIG--AIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNL  112 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~  112 (177)
                      +.++|.|+||+|++|++++..|...+. +.  ..+...--.... ..+.......+ ..+      . .......+... 
T Consensus         3 ~p~KV~IiGA~G~VG~~~a~~l~~~~l-~~~~~~~~~~l~~~~~-~~~~~~~~~~~-~~~------~-~~~~~~~~~~~-   71 (154)
T d1y7ta1           3 APVRVAVTGAAGQIGYSLLFRIAAGEM-LGKDQPVILQLLEIPQ-AMKALEGVVME-LED------C-AFPLLAGLEAT-   71 (154)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHTTTT-TCTTCCEEEEEECCGG-GHHHHHHHHHH-HHT------T-TCTTEEEEEEE-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhccc-cccccchhHhHhcccc-chhhHcCchhh-hhc------c-ccccccccccC-
Confidence            467999999999999999999987642 11  111111111111 11222211110 000      0 01122222221 


Q ss_pred             CCCCCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        113 ESEHLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                               ......++++|+||-+||.... .++..+.++.|+.-...+.+...++
T Consensus        72 ---------~~~~~~~~~advViitaG~~~~pg~~r~dl~~~N~~i~~~~~~~i~k~  119 (154)
T d1y7ta1          72 ---------DDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEV  119 (154)
T ss_dssp             ---------SCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---------CchhhhcccccEEEeecCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence                     1234567899999999997543 3456678899999999999888875

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.56  E-value=0.00026  Score=47.73  Aligned_cols=115  Identities=12%  Similarity=0.079  Sum_probs=70.6

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      +.++|.|+|+ |.+|+.++..|...+.  .++++++.+++.  ++-...++......         ...+......    
T Consensus         6 k~~KI~IIGa-G~VG~~lA~~l~~~~~--~el~L~D~~~~~--~~g~a~Dl~~~~~~---------~~~~~~~~~~----   67 (154)
T d1pzga1           6 RRKKVAMIGS-GMIGGTMGYLCALREL--ADVVLYDVVKGM--PEGKALDLSHVTSV---------VDTNVSVRAE----   67 (154)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTC--CEEEEECSSSSH--HHHHHHHHHHHHHH---------TTCCCCEEEE----
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCC--ceEEEEEecccc--chhHHHHHhhhccc---------cCCeeEEecc----
Confidence            4578999997 9999999998888864  688888876532  11111111110000         0011111110    


Q ss_pred             CCCCCCHHHHHHHhcCCcEEEEcCcccCch------HHHHHHHHHhHHHHHHHHHHHHhcCCCCCce
Q psy17489        115 EHLGLSEDSEQLIKSKVNIIFHCAASLRFD------EALQKAIRANLYATKQMLNLAKECVNLKRFC  175 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~------~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v  175 (177)
                             ...+..++++|+|+-+++.....      .+-.+.+..|+.....+++.+.++ +.+-++
T Consensus        68 -------~~~~~~~~~adiVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~-~p~aiv  126 (154)
T d1pzga1          68 -------YSYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKY-CPKTFI  126 (154)
T ss_dssp             -------CSHHHHHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHH-CTTCEE
T ss_pred             -------CchhhhhcCCCeEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhc-CCCcEE
Confidence                   12455678999999999864321      133456788999999999988887 544444

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.54  E-value=0.00018  Score=47.02  Aligned_cols=72  Identities=15%  Similarity=0.182  Sum_probs=52.0

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+++|.|+ |-+|+++++.|.+.|   ..|++++.++      +++++...               .....+.+|.+++ 
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g---~~vvvid~d~------~~~~~~~~---------------~~~~~~~gd~~~~-   54 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMG---HEVLAVDINE------EKVNAYAS---------------YATHAVIANATEE-   54 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTT---CCCEEEESCH------HHHHHTTT---------------TCSEEEECCTTCT-
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCC---CeEEEecCcH------HHHHHHHH---------------hCCcceeeecccc-
Confidence            56888875 899999999999999   5778887764      33443211               2345678999998 


Q ss_pred             CCCCHHHHHHH-hcCCcEEEEcCc
Q psy17489        117 LGLSEDSEQLI-KSKVNIIFHCAA  139 (177)
Q Consensus       117 ~~~~~~~~~~~-~~~~d~vi~~aa  139 (177)
                           +.+..+ +.++|.+|-...
T Consensus        55 -----~~l~~a~i~~a~~vi~~~~   73 (134)
T d2hmva1          55 -----NELLSLGIRNFEYVIVAIG   73 (134)
T ss_dssp             -----THHHHHTGGGCSEEEECCC
T ss_pred             -----hhhhccCCccccEEEEEcC
Confidence                 566665 578888877655

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=97.45  E-value=0.00062  Score=45.08  Aligned_cols=112  Identities=13%  Similarity=0.024  Sum_probs=69.7

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEe-CCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIP-SNLESE  115 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~D~~~~  115 (177)
                      |+|.|+|+ |.+|++++..|...|. +.++..++.++.....  ...+.......         ...+..+.. .|.   
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l-~~el~L~Di~~~~~~~--~~~d~~~~~~~---------~~~~~~i~~~~~~---   64 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQL-ARELVLLDVVEGIPQG--KALDMYESGPV---------GLFDTKVTGSNDY---   64 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSSSHHHH--HHHHHHTTHHH---------HTCCCEEEEESCG---
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCC-CceEEEeccccccchh--hhhhhhcccch---------hcccceEEecCCH---
Confidence            57899996 9999999999998874 4689998887642211  11111110000         112233322 221   


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCcccC-chHHHHHHHHHhHHHHHHHHHHHHhcCCCCCce
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAASLR-FDEALQKAIRANLYATKQMLNLAKECVNLKRFC  175 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~-~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v  175 (177)
                                +.++++|+++-+||... ..++-.+.++.|..-...+.+...++ ..+-++
T Consensus        65 ----------~~~~dadvvvitag~~~~~g~~r~~l~~~N~~i~~~i~~~i~~~-~p~aiv  114 (142)
T d1guza1          65 ----------ADTANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKH-SKNPII  114 (142)
T ss_dssp             ----------GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CSSCEE
T ss_pred             ----------HHhcCCeEEEEEEecCCCCCCchHHHHHHHHHHHHHHHHHhhcc-CCCeEE
Confidence                      23578899999999643 23344567888999999998888876 444443

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.45  E-value=0.00085  Score=44.44  Aligned_cols=111  Identities=13%  Similarity=0.046  Sum_probs=69.6

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChH-HHHHHHHhhhhhhcccccCcccCCCeEEE-eCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPE-ERVKNMLNSVIFDRLNKEVPDFRSKIQVI-PSNLES  114 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~D~~~  114 (177)
                      |++.|+|+ |.+|.+++..|+.+| -+.++..++.+++....+ ..+.+...     .       ........ ..|.. 
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~-~~~elvL~Di~~~~~~g~alDl~~~~~-----~-------~~~~~~i~~~~d~~-   65 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNL-DVDEIALVDIAEDLAVGEAMDLAHAAA-----G-------IDKYPKIVGGADYS-   65 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHS-CCSEEEEECSSHHHHHHHHHHHHHHHH-----T-------TTCCCEEEEESCGG-
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcC-cCceEEEEecccchhhHHHHHHhhhcc-----c-------cCCCCccccCCCHH-
Confidence            57889996 999999999999887 456888888754211100 11111110     0       01122222 23332 


Q ss_pred             CCCCCCHHHHHHHhcCCcEEEEcCcccC-chHHHHHHHHHhHHHHHHHHHHHHhcCCCCCce
Q psy17489        115 EHLGLSEDSEQLIKSKVNIIFHCAASLR-FDEALQKAIRANLYATKQMLNLAKECVNLKRFC  175 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~-~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v  175 (177)
                                  .+++.|+|+-.||... ..++..+.+..|..-...+.+...++ +.+-++
T Consensus        66 ------------~~~~adiVvitag~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~-~p~aiv  114 (142)
T d1ojua1          66 ------------LLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKI  114 (142)
T ss_dssp             ------------GGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTT-STTCEE
T ss_pred             ------------HhccccEEEEeccccCCCCCchHHHHHHhhHHHHHHHHHHHhh-CCCcEE
Confidence                        3578899999998543 23455667888999999999988887 444443

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.43  E-value=0.0011  Score=44.82  Aligned_cols=114  Identities=11%  Similarity=0.088  Sum_probs=71.5

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      ...++|.|+|+ |.+|..++..|...|. +.+++.++++++.  +.-...++...   .     .. .........+|..
T Consensus        18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~l-~~ElvLiD~~~~~--a~g~alDl~h~---~-----~~-~~~~~~~~~~d~~   84 (160)
T d1i0za1          18 VPNNKITVVGV-GQVGMACAISILGKSL-ADELALVDVLEDK--LKGEMMDLQHG---S-----LF-LQTPKIVADKDYS   84 (160)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSCHHH--HHHHHHHHHHT---G-----GG-CCCSEEEECSSGG
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCC-CcEEEEEEeccch--hHHHHHHHhcc---c-----cc-cCCCeEEeccchh
Confidence            34568999996 9999999999999874 4688888875421  11111221110   0     00 1122233334433


Q ss_pred             CCCCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCc
Q psy17489        114 SEHLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKECVNLKRF  174 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~  174 (177)
                      +             ++++|+|+..||.... .++..+.++.|+.....+.....+. +.+-+
T Consensus        85 ~-------------~~~adiVVitAg~~~~~g~tR~~l~~~N~~i~~~i~~~i~~~-~p~ai  132 (160)
T d1i0za1          85 V-------------TANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKY-SPDCI  132 (160)
T ss_dssp             G-------------GTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTCE
T ss_pred             h-------------cccccEEEEecCCccccCcchHHHHHHHHHHHHHHHHHHHhc-CCCcE
Confidence            3             4788999999997532 2344457788999999998888876 44443

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.37  E-value=0.0003  Score=47.63  Aligned_cols=38  Identities=29%  Similarity=0.367  Sum_probs=32.8

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .+++++++|.|+ |.+|..+++.|...|.  .++++..|+.
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~--~~i~v~nRt~   58 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGV--RAVLVANRTY   58 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCC--SEEEEECSSH
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCC--cEEEEEcCcH
Confidence            468899999997 9999999999999984  5788888864

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.37  E-value=0.00017  Score=48.56  Aligned_cols=112  Identities=12%  Similarity=0.056  Sum_probs=63.7

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCC----CcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFP----DIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPS  110 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~----~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  110 (177)
                      +.++|.|+||+|.+|++++..|...+.    ....++..+..+..    .+...+..+ ..+-       .......+. 
T Consensus         2 ~p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~----~~~~~l~~~-~~~~-------~~~~~~~~~-   68 (154)
T d5mdha1           2 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMM----GVLDGVLME-LQDC-------ALPLLKDVI-   68 (154)
T ss_dssp             CCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGH----HHHHHHHHH-HHHT-------CCTTEEEEE-
T ss_pred             CceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccch----hhhhhhhhh-hccc-------ccccccccc-
Confidence            457999999999999999999986531    11133333333211    222211110 0000       011111111 


Q ss_pred             CCCCCCCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        111 NLESEHLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       111 D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                       ...        .....++++|+||-++|.... .++..+.++.|..-...+.+...++
T Consensus        69 -~~~--------~~~~~~~~~dvVVitag~~~~~g~sr~dll~~N~~i~k~~~~~i~k~  118 (154)
T d5mdha1          69 -ATD--------KEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKY  118 (154)
T ss_dssp             -EES--------CHHHHTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHH
T ss_pred             -cCc--------ccccccCCceEEEEecccCCCCCCchhHHHHHhHHHHHHHHHHHHhh
Confidence             111        234567899999999997432 2344456788888888888877665

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.34  E-value=0.0007  Score=46.47  Aligned_cols=37  Identities=11%  Similarity=0.040  Sum_probs=33.1

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..|.+|+|+||+|.+|...++.....|   .+|+++++++
T Consensus        28 ~~G~~VlV~ga~ggvG~~aiqlak~~G---a~vi~~~~~~   64 (182)
T d1v3va2          28 KGGETVLVSAAAGAVGSVVGQIAKLKG---CKVVGAAGSD   64 (182)
T ss_dssp             CSSCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESSH
T ss_pred             CCCCEEEEEeCCCchhHHHHHHHHccC---CEEEEeCCCH
Confidence            468899999999999999999998888   6999998864

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.33  E-value=0.00056  Score=48.87  Aligned_cols=80  Identities=18%  Similarity=0.177  Sum_probs=51.6

Q ss_pred             cCCCceEEEecC----------------CcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccc
Q psy17489         33 FYRDGQILVTGG----------------TGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNK   96 (177)
Q Consensus        33 ~~~~~~vlVtG~----------------~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~   96 (177)
                      .++|++||||+|                +|..|.+|++.+...|   +.|.++.......                    
T Consensus         3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~G---a~V~li~g~~~~~--------------------   59 (223)
T d1u7za_           3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRG---ANVTLVSGPVSLP--------------------   59 (223)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTT---CEEEEEECSCCCC--------------------
T ss_pred             ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcC---CchhhhhcccccC--------------------
Confidence            467888888876                5669999999999999   6777765533211                    


Q ss_pred             cCcccCCCeEEEeCCCCCCCCCCCHHHHHHHhcCCcEEEEcCcccCc
Q psy17489         97 EVPDFRSKIQVIPSNLESEHLGLSEDSEQLIKSKVNIIFHCAASLRF  143 (177)
Q Consensus        97 ~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~  143 (177)
                          ....+..+...-.+.-    .+.+...+.+.|++|++||...+
T Consensus        60 ----~p~~~~~~~~~t~~~m----~~~~~~~~~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          60 ----TPPFVKRVDVMTALEM----EAAVNASVQQQNIFIGCAAVADY   98 (223)
T ss_dssp             ----CCTTEEEEECCSHHHH----HHHHHHHGGGCSEEEECCBCCSE
T ss_pred             ----cccccccceehhhHHH----HHHHHhhhccceeEeeeechhhh
Confidence                1134555544322110    02333445689999999998654

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.31  E-value=0.0024  Score=42.11  Aligned_cols=111  Identities=15%  Similarity=0.191  Sum_probs=64.6

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEE-eCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVI-PSNLESE  115 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~D~~~~  115 (177)
                      ++|.|+|+ |.+|++++..|...+.  ..++.++..++.  ......++......         ......+. ..|..+ 
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l--~dl~l~D~~~~~--~~~~~~Dl~~~~~~---------~~~~~~i~~~~d~~~-   66 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKEL--GDIVLLDIVEGV--PQGKALDLYEASPI---------EGFDVRVTGTNNYAD-   66 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTC--SEEEEECSSSSH--HHHHHHHHHTTHHH---------HTCCCCEEEESCGGG-
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCc--ceEEEEeecccc--chhHHHHhhccccc---------cCCCCEEEecCcHHH-
Confidence            57889996 9999999999988864  688888876532  11111121110000         00122222 223222 


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCcccC-chHHHHHHHHHhHHHHHHHHHHHHhcCCCCCce
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAASLR-FDEALQKAIRANLYATKQMLNLAKECVNLKRFC  175 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~-~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v  175 (177)
                                  +++.|++|-+||... ..++..+.++.|......+.+...++ +.+-++
T Consensus        67 ------------~~~advvvitag~~~~~~~~r~dl~~~N~~i~~~i~~~i~k~-~p~aiv  114 (142)
T d1uxja1          67 ------------TANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPL-SPNAVI  114 (142)
T ss_dssp             ------------GTTCSEEEECCSCC---------CHHHHHHHHHHHHHHHGGG-CTTCEE
T ss_pred             ------------hcCCCEEEEeeeccCCcCcchhHHHhHHHHHHHHHHHHHhcc-CCCceE
Confidence                        367899999999643 23455567889999999999888886 444433

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.30  E-value=0.0027  Score=42.00  Aligned_cols=111  Identities=14%  Similarity=0.115  Sum_probs=69.9

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEe-CCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIP-SNLESE  115 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~D~~~~  115 (177)
                      .++.|+|+ |.+|++++..|+..|. +.+++.+++++..  .+-+..++..   .       ........... .|..  
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l-~~ElvL~D~~~~~--~~g~a~Dl~~---a-------~~~~~~~~i~~~~~~~--   65 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGI-AREIVLEDIAKER--VEAEVLDMQH---G-------SSFYPTVSIDGSDDPE--   65 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSHHH--HHHHHHHHHH---T-------GGGSTTCEEEEESCGG--
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCC-CcEEEEEEecccc--chhHHHHHHh---c-------cccCCCceeecCCCHH--
Confidence            47889996 9999999999998874 4688888876421  1111111111   0       00112222322 2222  


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhcCCCCCce
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKECVNLKRFC  175 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v  175 (177)
                                 .++++|+||-+||.... .++..+.++.|..-...+.+...++ ..+-++
T Consensus        66 -----------~~~daDvVVitaG~~~~~g~~R~dl~~~N~~i~~~i~~~i~~~-~p~ai~  114 (143)
T d1llda1          66 -----------ICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIY  114 (143)
T ss_dssp             -----------GGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEE
T ss_pred             -----------HhhCCcEEEEecccccCCCCchhhhhhhhHHHHHHHHHHHHhh-CCCeEE
Confidence                       24678999999997543 3455568899999999998888877 544443

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.25  E-value=0.00014  Score=48.69  Aligned_cols=38  Identities=13%  Similarity=0.187  Sum_probs=29.7

Q ss_pred             CceEEEecCCcchHHHHHHHHHhh-CCCcCeEEEEEeCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRS-FPDIGAIYIMVRDK   73 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~-g~~~~~v~~~~r~~   73 (177)
                      +|+|.|.||||++|+.+++.|+++ .+.+..++.+.++.
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~   39 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQ   39 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSS
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccc
Confidence            468999999999999999987764 34556787776654

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.14  E-value=0.00022  Score=42.29  Aligned_cols=38  Identities=24%  Similarity=0.306  Sum_probs=32.7

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~   74 (177)
                      ..+.+++|+||+|.+|...++.+...|   .+|++..++++
T Consensus        30 ~~~~~vlI~gasGgVG~~aiQlak~~G---~~Vi~~t~s~~   67 (77)
T d1o8ca2          30 PQDGEIVVTGASGGVGSTAVALLHKLG---YQVVAVSGRES   67 (77)
T ss_dssp             GGGCEEEESSTTSHHHHHHHHHHHHTT---CCEEEEESCGG
T ss_pred             cCCCcEEEEeCCCcHHHHHHHHHHHcC---CeEEEEECCHH
Confidence            357799999999999999999888888   68998888753

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.08  E-value=0.0038  Score=39.30  Aligned_cols=76  Identities=11%  Similarity=0.079  Sum_probs=52.1

Q ss_pred             ccccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEe
Q psy17489         30 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIP  109 (177)
Q Consensus        30 ~~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  109 (177)
                      +.-.++||+++|.| +|.+|..-++.|++.|   .+|++.+....     +.+..+..              ..++.++.
T Consensus         6 i~l~l~~k~vlVvG-~G~va~~ka~~ll~~g---a~v~v~~~~~~-----~~~~~~~~--------------~~~i~~~~   62 (113)
T d1pjqa1           6 IFCQLRDRDCLIVG-GGDVAERKARLLLEAG---ARLTVNALTFI-----PQFTVWAN--------------EGMLTLVE   62 (113)
T ss_dssp             EEECCBTCEEEEEC-CSHHHHHHHHHHHHTT---BEEEEEESSCC-----HHHHHHHT--------------TTSCEEEE
T ss_pred             eEEEeCCCEEEEEC-CCHHHHHHHHHHHHCC---CeEEEEeccCC-----hHHHHHHh--------------cCCceeec
Confidence            44457899999999 6779999999999998   78888776443     33333322              14677777


Q ss_pred             CCCCCCCCCCCHHHHHHHhcCCcEEEEcCc
Q psy17489        110 SNLESEHLGLSEDSEQLIKSKVNIIFHCAA  139 (177)
Q Consensus       110 ~D~~~~~~~~~~~~~~~~~~~~d~vi~~aa  139 (177)
                      .++.+..           +.+++.++.+.+
T Consensus        63 ~~~~~~d-----------l~~~~lv~~at~   81 (113)
T d1pjqa1          63 GPFDETL-----------LDSCWLAIAATD   81 (113)
T ss_dssp             SSCCGGG-----------GTTCSEEEECCS
T ss_pred             cCCCHHH-----------hCCCcEEeecCC
Confidence            6665531           356677776543

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.04  E-value=0.00029  Score=46.89  Aligned_cols=37  Identities=19%  Similarity=0.231  Sum_probs=29.7

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      .++|.|.||||++|..+++.|.+.++...++..+..+
T Consensus         2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~   38 (144)
T d2hjsa1           2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASA   38 (144)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeec
Confidence            3689999999999999999998766555677766544

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.02  E-value=0.0019  Score=43.78  Aligned_cols=37  Identities=16%  Similarity=0.018  Sum_probs=32.1

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..|.+|+|+||+|.+|...++.....|   .+|+++++++
T Consensus        27 ~~g~~VlV~Ga~G~vG~~aiq~a~~~G---~~vi~~~~~~   63 (174)
T d1yb5a2          27 KAGESVLVHGASGGVGLAACQIARAYG---LKILGTAGTE   63 (174)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESSH
T ss_pred             CCCCEEEEEeccccccccccccccccC---cccccccccc
Confidence            367899999999999999999988888   6899888754

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.00  E-value=0.0017  Score=44.26  Aligned_cols=37  Identities=16%  Similarity=0.157  Sum_probs=32.1

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..|.+|+|+||+|.+|...++.+...|   .+|++.++++
T Consensus        24 ~~g~~VlI~ga~g~vG~~~iqla~~~g---~~vi~~~~~~   60 (183)
T d1pqwa_          24 SPGERVLIHSATGGVGMAAVSIAKMIG---ARIYTTAGSD   60 (183)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHHT---CEEEEEESSH
T ss_pred             CCCCEEEEECCCCCcccccchhhcccc---ccceeeeccc
Confidence            357899999999999999999998898   6888888754

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.98  E-value=0.00077  Score=45.89  Aligned_cols=39  Identities=10%  Similarity=0.069  Sum_probs=33.2

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~   74 (177)
                      ...|.+|+|+||+|.+|...++.+...|   .+|++.++++.
T Consensus        25 ~~~g~~VlI~ga~G~vG~~aiqlak~~G---~~vi~~~~~~~   63 (171)
T d1iz0a2          25 ARPGEKVLVQAAAGALGTAAVQVARAMG---LRVLAAASRPE   63 (171)
T ss_dssp             CCTTCEEEESSTTBHHHHHHHHHHHHTT---CEEEEEESSGG
T ss_pred             CCCCCEEEEEeccccchhhhhhhhcccc---ccccccccccc
Confidence            3468899999999999999999888888   68999888653

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.93  E-value=0.0014  Score=44.22  Aligned_cols=108  Identities=10%  Similarity=0.060  Sum_probs=64.3

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      ...+|.|+|+ |.+|.+++..|...|. +..++.++++++.  +.-...++...         .............|..+
T Consensus        18 ~~~KI~IIGa-G~VG~~~A~~l~~~~l-~~elvL~D~~~~~--a~g~alDl~~~---------~~~~~~~~~~~~~d~~~   84 (159)
T d2ldxa1          18 SRCKITVVGV-GDVGMACAISILLKGL-ADELALVDADTDK--LRGEALDLQHG---------SLFLSTPKIVFGKDYNV   84 (159)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTS-CSEEEEECSCHHH--HHHHHHHHHHT---------TTTCSCCEEEEESSGGG
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEeCCchh--hhccHHHHhCc---------chhcCCCeEEeccchhh
Confidence            3457999995 9999999999999875 4578888875421  11111122110         00011122223334322


Q ss_pred             CCCCCCHHHHHHHhcCCcEEEEcCcccCc-hHHHHHHHHHhHHHHHHHHHHHHhc
Q psy17489        115 EHLGLSEDSEQLIKSKVNIIFHCAASLRF-DEALQKAIRANLYATKQMLNLAKEC  168 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~  168 (177)
                                   ++++|+||-.||.... .++..+.++.|+.....+.+...++
T Consensus        85 -------------~~~adivvitag~~~~~~~~R~dll~~N~~i~~~i~~~i~~~  126 (159)
T d2ldxa1          85 -------------SANSKLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQN  126 (159)
T ss_dssp             -------------GTTEEEEEECCSCCCCTTTCSSCTTHHHHHHHHHHTTTHHHH
T ss_pred             -------------hccccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhcc
Confidence                         3688999999986432 2333345677888888887777665

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=96.89  E-value=0.00068  Score=46.61  Aligned_cols=39  Identities=26%  Similarity=0.381  Sum_probs=28.3

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG   75 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~   75 (177)
                      +++|.|.||||++|..+++.|.+. +.+.-+...+++..+
T Consensus         1 MikVaIvGATGyvG~eLirlL~~H-P~~ei~~l~s~~~aG   39 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNH-PEAKITYLSSRTYAG   39 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHC-TTEEEEEEECSTTTT
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhC-CCceEEEeeccccCC
Confidence            468999999999999999999876 455333444444433

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.89  E-value=0.0018  Score=44.37  Aligned_cols=39  Identities=26%  Similarity=0.288  Sum_probs=33.6

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG   75 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~   75 (177)
                      ..|.+|||+||+|.+|...++.....|   .+|++..+++..
T Consensus        30 ~~g~~VLI~gaaGGVG~~aiQlak~~G---a~Viat~~s~~k   68 (176)
T d1xa0a2          30 PERGPVLVTGATGGVGSLAVSMLAKRG---YTVEASTGKAAE   68 (176)
T ss_dssp             GGGCCEEESSTTSHHHHHHHHHHHHTT---CCEEEEESCTTC
T ss_pred             CCCCEEEEEeccchHHHHHHHHHHHcC---CceEEecCchHH
Confidence            457899999999999999999998888   689998887643

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.89  E-value=0.0017  Score=39.49  Aligned_cols=37  Identities=19%  Similarity=0.250  Sum_probs=31.6

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~   74 (177)
                      ++||+++|.|. |-.|..+++.|.+.|   .+|++.+.+..
T Consensus         3 ~~~K~v~ViGl-G~sG~s~a~~L~~~g---~~v~~~D~~~~   39 (93)
T d2jfga1           3 YQGKNVVIIGL-GLTGLSCVDFFLARG---VTPRVMDTRMT   39 (93)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHHTT---CCCEEEESSSS
T ss_pred             cCCCEEEEEeE-CHHHHHHHHHHHHCC---CEEEEeeCCcC
Confidence            57899999996 778999999999999   68888887654

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.83  E-value=0.009  Score=39.64  Aligned_cols=111  Identities=12%  Similarity=0.159  Sum_probs=67.1

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEe-CCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIP-SNLESE  115 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~D~~~~  115 (177)
                      .+|.|.|+ |.+|++++..|...+  +..+.+++++++.  .+-...++......         ...+..... .|..  
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~--l~el~L~Di~~~~--~~g~a~Dl~~~~~~---------~~~~~~v~~~~~~~--   67 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKN--LGDVVLFDIVKNM--PHGKALDTSHTNVM---------AYSNCKVSGSNTYD--   67 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTT--CCEEEEECSSSSH--HHHHHHHHHTHHHH---------HTCCCCEEEECCGG--
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCC--CCeEEEEeccCCc--ceeeecchhhhccc---------cCCCcEEEeccccc--
Confidence            47899995 999999998777765  4788888876532  11121211110000         012222222 2221  


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCcccCch------HHHHHHHHHhHHHHHHHHHHHHhcCCCCCce
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAASLRFD------EALQKAIRANLYATKQMLNLAKECVNLKRFC  175 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa~~~~~------~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v  175 (177)
                                 .++++|+++-+++.....      .+-...++.|......+.+...++ ..+-++
T Consensus        68 -----------~~~~advvvitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~-~p~aiv  121 (150)
T d1t2da1          68 -----------DLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKN-CPNAFI  121 (150)
T ss_dssp             -----------GGTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTSEE
T ss_pred             -----------ccCCCcEEEEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhc-CCCeEE
Confidence                       246889999999964321      123346788999999998888887 555544

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=96.80  E-value=0.00099  Score=44.40  Aligned_cols=36  Identities=14%  Similarity=0.255  Sum_probs=27.3

Q ss_pred             ceEEEecCCcchHHHHHHHHHhh-CCCcCeEEEEEeC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRS-FPDIGAIYIMVRD   72 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~-g~~~~~v~~~~r~   72 (177)
                      |+|.|.||||++|..+++.|++. .+....+..++.+
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~   37 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTS   37 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESS
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccc
Confidence            57999999999999999988763 2444566665543

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=96.78  E-value=0.0047  Score=41.81  Aligned_cols=37  Identities=16%  Similarity=0.032  Sum_probs=33.0

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..|.+|+|+||+|.+|...++.....|   .+|++.++++
T Consensus        27 ~~g~~Vlv~ga~g~vG~~~iqlak~~G---a~Vi~~~~s~   63 (179)
T d1qora2          27 KPDEQFLFHAAAGGVGLIACQWAKALG---AKLIGTVGTA   63 (179)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHHT---CEEEEEESSH
T ss_pred             CCCCEEEEEccccccchHHHHHHHHhC---CeEeecccch
Confidence            357899999999999999999998898   6999998875

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.69  E-value=0.0055  Score=40.50  Aligned_cols=75  Identities=12%  Similarity=0.158  Sum_probs=52.5

Q ss_pred             eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCCC
Q psy17489         38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEHL  117 (177)
Q Consensus        38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~  117 (177)
                      +++|.|. |-+|..+++.|.+.|   ..|++++.+++  .....+.+..               ...+.++.+|.+++  
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~---~~v~vId~d~~--~~~~~~~~~~---------------~~~~~vi~Gd~~d~--   61 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRG---QNVTVISNLPE--DDIKQLEQRL---------------GDNADVIPGDSNDS--   61 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTT---CCEEEEECCCH--HHHHHHHHHH---------------CTTCEEEESCTTSH--
T ss_pred             EEEEECC-CHHHHHHHHHHHHcC---CCEEEEeccch--hHHHHHHHhh---------------cCCcEEEEccCcch--
Confidence            5788885 789999999999998   57777776542  1112222221               24688999999998  


Q ss_pred             CCCHHHHHHH-hcCCcEEEEcCc
Q psy17489        118 GLSEDSEQLI-KSKVNIIFHCAA  139 (177)
Q Consensus       118 ~~~~~~~~~~-~~~~d~vi~~aa  139 (177)
                          +.++++ +++++.+|-+..
T Consensus        62 ----~~L~~a~i~~a~~vi~~~~   80 (153)
T d1id1a_          62 ----SVLKKAGIDRCRAILALSD   80 (153)
T ss_dssp             ----HHHHHHTTTTCSEEEECSS
T ss_pred             ----HHHHHhccccCCEEEEccc
Confidence                566654 457888888754

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.59  E-value=0.006  Score=41.19  Aligned_cols=34  Identities=18%  Similarity=0.027  Sum_probs=30.2

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .|++.|.|+ |.+|..++..|.+.|   +.|++.+|++
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G---~~V~~~~r~~   34 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKG---QSVLAWDIDA   34 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTT---CEEEEECSCH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCC---CEEEEEECCH
Confidence            479999995 999999999999999   5899998864

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=96.45  E-value=0.01  Score=40.24  Aligned_cols=38  Identities=8%  Similarity=0.150  Sum_probs=31.3

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ...|.+|+|+|+ |.+|...++.+...|.  .+|+++++++
T Consensus        26 ~~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga--~~Vi~~~~~~   63 (182)
T d1vj0a2          26 SFAGKTVVIQGA-GPLGLFGVVIARSLGA--ENVIVIAGSP   63 (182)
T ss_dssp             CCBTCEEEEECC-SHHHHHHHHHHHHTTB--SEEEEEESCH
T ss_pred             CCCCCEEEEECC-Cccchhheeccccccc--cccccccccc
Confidence            346889999996 8999999998888873  5899998865

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.42  E-value=0.0042  Score=42.16  Aligned_cols=37  Identities=22%  Similarity=0.245  Sum_probs=30.2

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..++++++|.|+ |+.+++++..|.+.+   .+|+++.|+.
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~aL~~~~---~~i~I~nR~~   51 (171)
T d1p77a1          15 LRPNQHVLILGA-GGATKGVLLPLLQAQ---QNIVLANRTF   51 (171)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTT---CEEEEEESSH
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHcccC---ceeeeccchH
Confidence            457899999985 667899999998754   6899999975

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=96.41  E-value=0.0032  Score=42.64  Aligned_cols=37  Identities=24%  Similarity=0.166  Sum_probs=31.1

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..+||+|+|.|+ |+.+++++..|.+.|   .+|+++.|+.
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~al~~~g---~~i~I~nRt~   51 (170)
T d1nyta1          15 IRPGLRILLIGA-GGASRGVLLPLLSLD---CAVTITNRTV   51 (170)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTT---CEEEEECSSH
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHhcccc---eEEEeccchH
Confidence            357899999995 778999999999988   4788888865

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=96.39  E-value=0.021  Score=38.09  Aligned_cols=36  Identities=17%  Similarity=0.119  Sum_probs=29.9

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..|.+++|+| +|.+|...++.+...|   .+|+++++++
T Consensus        25 ~~g~~vlV~G-~G~vG~~~~~~ak~~G---a~vi~v~~~~   60 (170)
T d1e3ja2          25 QLGTTVLVIG-AGPIGLVSVLAAKAYG---AFVVCTARSP   60 (170)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEEESCH
T ss_pred             CCCCEEEEEc-ccccchhhHhhHhhhc---ccccccchHH
Confidence            4577999997 6889999998888887   5899998865

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.38  E-value=0.0018  Score=42.93  Aligned_cols=36  Identities=31%  Similarity=0.362  Sum_probs=32.1

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      +.++|.|.||.|.+|..+++.|.+.|   +.|.+.+|+.
T Consensus         8 ~~~kI~iIGg~G~mG~~la~~L~~~G---~~V~~~d~~~   43 (152)
T d2pv7a2           8 DIHKIVIVGGYGKLGGLFARYLRASG---YPISILDRED   43 (152)
T ss_dssp             TCCCEEEETTTSHHHHHHHHHHHTTT---CCEEEECTTC
T ss_pred             CCCeEEEEcCCCHHHHHHHHHHHHcC---CCcEeccccc
Confidence            46799999999999999999999999   4788888865

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.18  E-value=0.016  Score=38.72  Aligned_cols=39  Identities=15%  Similarity=0.139  Sum_probs=32.4

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ...+.+++|+|++|.+|...++.+...|.  ..|++.++++
T Consensus        25 ~~~g~~vlV~G~~G~vG~~~~~~~~~~g~--~~V~~~~~~~   63 (170)
T d1jvba2          25 LDPTKTLLVVGAGGGLGTMAVQIAKAVSG--ATIIGVDVRE   63 (170)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHTC--CEEEEEESSH
T ss_pred             CCCCCEEEEEeccccceeeeeeccccccc--ccccccccch
Confidence            34578999999999999999998888874  6888888764

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=96.18  E-value=0.0032  Score=41.90  Aligned_cols=34  Identities=24%  Similarity=0.271  Sum_probs=30.4

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~   74 (177)
                      |+|+|.|+ |.+|..++..|.+.|   ..|.+++|++.
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G---~~V~~~~r~~~   34 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQG---HEVQGWLRVPQ   34 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTT---CEEEEECSSCC
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCC---CceEEEEcCHH
Confidence            68999997 999999999999999   58999998764

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.16  E-value=0.01  Score=39.78  Aligned_cols=38  Identities=13%  Similarity=0.090  Sum_probs=31.4

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~   74 (177)
                      ...|.+++|.|+ |.+|...++.+...|   .+|+++++++.
T Consensus        25 ~~~g~~vlI~Ga-G~vG~~a~q~ak~~G---~~vi~~~~~~~   62 (168)
T d1piwa2          25 CGPGKKVGIVGL-GGIGSMGTLISKAMG---AETYVISRSSR   62 (168)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHHT---CEEEEEESSST
T ss_pred             cCCCCEEEEECC-CCcchhHHHHhhhcc---ccccccccchh
Confidence            346789999986 899999888888888   68999998764

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.09  E-value=0.0029  Score=42.89  Aligned_cols=37  Identities=24%  Similarity=0.375  Sum_probs=32.6

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~   74 (177)
                      .+.+|||+||+|.+|...++.....|   .+|+..+++++
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~G---a~Viat~~s~~   59 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRG---YDVVASTGNRE   59 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHT---CCEEEEESSSS
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcC---CceEEEecCHH
Confidence            45689999999999999999998899   68999998764

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=96.06  E-value=0.058  Score=32.24  Aligned_cols=33  Identities=15%  Similarity=0.126  Sum_probs=25.6

Q ss_pred             ceEEEecCCcchH-HHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         37 GQILVTGGTGFMG-KLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        37 ~~vlVtG~~G~iG-~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      |++-++| -|++| +.|++.|.+.|   ..|...++..
T Consensus         2 ~~ihfiG-IgG~GMs~LA~~L~~~G---~~VsGSD~~~   35 (89)
T d1j6ua1           2 MKIHFVG-IGGIGMSAVALHEFSNG---NDVYGSNIEE   35 (89)
T ss_dssp             CEEEEET-TTSHHHHHHHHHHHHTT---CEEEEECSSC
T ss_pred             cEEEEEe-ECHHHHHHHHHHHHhCC---CeEEEEeCCC
Confidence            5677776 55566 57899999999   6899988764

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=96.05  E-value=0.012  Score=40.51  Aligned_cols=37  Identities=16%  Similarity=0.232  Sum_probs=30.8

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ++.+++|.|.| +|.+|++++..|.+.|   +.|.+.+|++
T Consensus         4 ~~~m~KI~ViG-aG~wGtAlA~~La~~g---~~V~l~~r~~   40 (189)
T d1n1ea2           4 LLYLNKAVVFG-SGAFGTALAMVLSKKC---REVCVWHMNE   40 (189)
T ss_dssp             CCCEEEEEEEC-CSHHHHHHHHHHHTTE---EEEEEECSCH
T ss_pred             cceeceEEEEC-CCHHHHHHHHHHHHcC---CeEEEEEecH
Confidence            45567899999 7889999999999998   5888888754

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.02  E-value=0.0068  Score=40.84  Aligned_cols=36  Identities=22%  Similarity=0.347  Sum_probs=30.7

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ++++|+|.|+ |+.|++++..|.+.|.  .+|.++.|+.
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~--~~I~I~nR~~   51 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGF--EKLKIYARNV   51 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTC--CCEEEECSCH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCC--CEEEEecccH
Confidence            5789999995 8899999999999884  6788888865

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.01  E-value=0.029  Score=38.40  Aligned_cols=89  Identities=12%  Similarity=0.077  Sum_probs=55.6

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChH----HHHHHHHhhhhhhcccccCcccCCCeEE
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPE----ERVKNMLNSVIFDRLNKEVPDFRSKIQV  107 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~v~~  107 (177)
                      ..+.++++.|.| .|.||+.+++.+...|   .+|+..++........    +.+.+.+.              ..++..
T Consensus        40 ~~l~~~~vgiiG-~G~IG~~va~~l~~fg---~~v~~~d~~~~~~~~~~~~~~~l~ell~--------------~sDii~  101 (188)
T d1sc6a1          40 FEARGKKLGIIG-YGHIGTQLGILAESLG---MYVYFYDIENKLPLGNATQVQHLSDLLN--------------MSDVVS  101 (188)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSSCCCCCTTCEECSCHHHHHH--------------HCSEEE
T ss_pred             ccccceEEEEee-cccchhhhhhhccccc---ceEeeccccccchhhhhhhhhhHHHHHh--------------hcccee
Confidence            347889999997 9999999999999888   6899888764321100    11222222              146667


Q ss_pred             EeCCCCCCCCCCCHHHHHHHhcCCcEEEEcC
Q psy17489        108 IPSNLESEHLGLSEDSEQLIKSKVNIIFHCA  138 (177)
Q Consensus       108 ~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a  138 (177)
                      +.+.+++...+.-.+..-..+++=-++||.|
T Consensus       102 i~~plt~~T~~li~~~~l~~mk~~a~lIN~a  132 (188)
T d1sc6a1         102 LHVPENPSTKNMMGAKEISLMKPGSLLINAS  132 (188)
T ss_dssp             ECCCSSTTTTTCBCHHHHHHSCTTEEEEECS
T ss_pred             ecccCCcchhhhccHHHHhhCCCCCEEEEcC
Confidence            7777777654433344444455545555554

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.00  E-value=0.014  Score=39.84  Aligned_cols=35  Identities=14%  Similarity=0.052  Sum_probs=27.2

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      +.+|+|+||+|.+|+..++.....|.  ..|+..+.+
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga--~~vi~~~~~   65 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGC--SRVVGICGT   65 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTC--SEEEEEESS
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCC--cceecccch
Confidence            47899999999999999988877873  345555544

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=95.96  E-value=0.0068  Score=40.68  Aligned_cols=37  Identities=14%  Similarity=0.033  Sum_probs=29.6

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ...|.+|+|.|+ |.+|...++.+...|   .+++++++++
T Consensus        28 ~~~G~~VlI~Ga-G~vG~~a~qlak~~G---a~~i~~~~~~   64 (168)
T d1uufa2          28 AGPGKKVGVVGI-GGLGHMGIKLAHAMG---AHVVAFTTSE   64 (168)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESSG
T ss_pred             CCCCCEEEEecc-chHHHHHHHHhhccc---ccchhhccch
Confidence            345789999986 889999988888888   5777777765

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.93  E-value=0.0053  Score=41.89  Aligned_cols=35  Identities=23%  Similarity=0.409  Sum_probs=26.5

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEe
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   71 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r   71 (177)
                      |++|.|.||+|++|..+++.|.++ +++.-..+..+
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~H-P~~ei~~l~~~   35 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRH-PHMTITALTVS   35 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHC-TTEEEEEEEEE
T ss_pred             CcEEEEECcccHHHHHHHHHHHhC-CCCceEeeEee
Confidence            468999999999999999999987 44433333344

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=95.88  E-value=0.032  Score=38.40  Aligned_cols=40  Identities=10%  Similarity=-0.037  Sum_probs=34.1

Q ss_pred             cccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489         31 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        31 ~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~   74 (177)
                      ...+.|+++.|.| .|-||+.+++.+...|   .+|+..++...
T Consensus        44 ~~eL~gktvgIiG-~G~IG~~va~~l~~fg---~~v~~~d~~~~   83 (193)
T d1mx3a1          44 AARIRGETLGIIG-LGRVGQAVALRAKAFG---FNVLFYDPYLS   83 (193)
T ss_dssp             CCCCTTCEEEEEC-CSHHHHHHHHHHHTTT---CEEEEECTTSC
T ss_pred             ceeeeCceEEEec-cccccccceeeeeccc---cceeeccCccc
Confidence            4557899999998 8999999999999888   68888887643

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.85  E-value=0.056  Score=37.24  Aligned_cols=38  Identities=18%  Similarity=0.183  Sum_probs=32.6

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..+.|+++.|.| .|.||+.+++.+...|   .+|++.++..
T Consensus        39 ~el~gk~vgIiG-~G~IG~~va~~l~~fg---~~V~~~d~~~   76 (197)
T d1j4aa1          39 REVRDQVVGVVG-TGHIGQVFMQIMEGFG---AKVITYDIFR   76 (197)
T ss_dssp             CCGGGSEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSSC
T ss_pred             ccccCCeEEEec-ccccchhHHHhHhhhc---ccccccCccc
Confidence            446799999999 8999999999999888   6888887654

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=95.83  E-value=0.013  Score=39.57  Aligned_cols=38  Identities=16%  Similarity=0.064  Sum_probs=32.4

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .+.||+++|.|.+.-+|+.++..|.+.|   ++|+......
T Consensus        34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~g---atVt~~h~~t   71 (166)
T d1b0aa1          34 DTFGLNAVVIGASNIVGRPMSMELLLAG---CTTTVTHRFT   71 (166)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTT---CEEEEECSSC
T ss_pred             ccccceEEEEeccccccHHHHHHHHHhh---cccccccccc
Confidence            4689999999999999999999999998   6787665443

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=95.73  E-value=0.021  Score=39.00  Aligned_cols=37  Identities=16%  Similarity=0.137  Sum_probs=32.7

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .+.|+++.|.| .|-||+.+++.+...|   .+|+..+|..
T Consensus        39 ~l~gk~vgIiG-~G~IG~~va~~l~~~g---~~v~~~d~~~   75 (181)
T d1qp8a1          39 LIQGEKVAVLG-LGEIGTRVGKILAALG---AQVRGFSRTP   75 (181)
T ss_dssp             CCTTCEEEEES-CSTHHHHHHHHHHHTT---CEEEEECSSC
T ss_pred             cccCceEEEec-cccccccceeeeeccc---cccccccccc
Confidence            47899999999 7889999999999998   6899998865

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.71  E-value=0.021  Score=38.60  Aligned_cols=38  Identities=16%  Similarity=0.166  Sum_probs=33.3

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .+.||+++|.|.+.-+|+.++..|.+.|   ++|+......
T Consensus        36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~g---atVt~~~~~t   73 (170)
T d1a4ia1          36 PIAGRHAVVVGRSKIVGAPMHDLLLWNN---ATVTTCHSKT   73 (170)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTT---CEEEEECTTC
T ss_pred             ccccceEEEEecCCccchHHHHHHHhcc---CceEEEeccc
Confidence            4789999999999999999999999998   6888776544

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.70  E-value=0.0063  Score=40.15  Aligned_cols=39  Identities=26%  Similarity=0.394  Sum_probs=32.4

Q ss_pred             ccccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         30 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        30 ~~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      +.-.++||+++|+|| |.+|..-++.|++.|   .+|++++..
T Consensus         7 l~~~l~gkrvLViGg-G~va~~ka~~Ll~~G---A~VtVvap~   45 (150)
T d1kyqa1           7 LAHQLKDKRILLIGG-GEVGLTRLYKLMPTG---CKLTLVSPD   45 (150)
T ss_dssp             EEECCTTCEEEEEEE-SHHHHHHHHHHGGGT---CEEEEEEEE
T ss_pred             hheeeCCCEEEEECC-CHHHHHHHHHHHHCC---CEEEEEeCC
Confidence            334478999999996 789999999999999   678777654

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=95.62  E-value=0.01  Score=39.66  Aligned_cols=36  Identities=33%  Similarity=0.431  Sum_probs=30.0

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      +++|+|.| .|.+|..+++.|.+.|+. .+|++.++++
T Consensus         1 Mk~I~IIG-~G~mG~sla~~L~~~g~~-~~I~~~D~~~   36 (171)
T d2g5ca2           1 MQNVLIVG-VGFMGGSFAKSLRRSGFK-GKIYGYDINP   36 (171)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHHTTCC-SEEEEECSCH
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHhcCCC-eEEEEEECCh
Confidence            46799997 699999999999999864 3788888764

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=95.58  E-value=0.0094  Score=40.81  Aligned_cols=41  Identities=22%  Similarity=0.417  Sum_probs=29.2

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGS   76 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~   76 (177)
                      +..+|.|.||||+.|..+++.|.+. +.+.-+.+.+++..+.
T Consensus         4 ~kikVaIlGATGyvG~elirLL~~H-P~~ei~~l~S~~~aG~   44 (183)
T d2cvoa1           4 EEVRIAVLGASGYTGAEIVRLLANH-PQFRIKVMTADRKAGE   44 (183)
T ss_dssp             SCEEEEEESCSSHHHHHHHHHHTTC-SSEEEEEEECSTTTTS
T ss_pred             CccEEEEECcccHHHHHHHHHHHhC-CCceEEEEeccccCCC
Confidence            3457999999999999999999987 4443333334444443

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.56  E-value=0.021  Score=38.73  Aligned_cols=33  Identities=21%  Similarity=0.196  Sum_probs=28.3

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      |+|.|.| +|-+|.+++..|.+.|   .+|+...|..
T Consensus         1 MkI~ViG-aG~~GtalA~~la~~g---~~V~l~~r~~   33 (180)
T d1txga2           1 MIVSILG-AGAMGSALSVPLVDNG---NEVRIWGTEF   33 (180)
T ss_dssp             CEEEEES-CCHHHHHHHHHHHHHC---CEEEEECCGG
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCC---CEEEEEEecc
Confidence            6889999 6999999999999998   5888887753

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=95.52  E-value=0.0069  Score=40.30  Aligned_cols=36  Identities=28%  Similarity=0.315  Sum_probs=27.5

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEe
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   71 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r   71 (177)
                      |-+|.|.||+|++|..+++.|.+..+....+..++.
T Consensus         1 g~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s   36 (154)
T d2gz1a1           1 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLAS   36 (154)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEEC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHcCCCCceEEEEecc
Confidence            458999999999999999988776433455655543

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=95.52  E-value=0.077  Score=36.53  Aligned_cols=38  Identities=16%  Similarity=0.102  Sum_probs=33.0

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..+.++++.|.| .|-||+.+++.+...|   .+|++.++..
T Consensus        41 ~~l~~ktvgIiG-~G~IG~~va~~l~~fg---~~v~~~d~~~   78 (199)
T d1dxya1          41 KELGQQTVGVMG-TGHIGQVAIKLFKGFG---AKVIAYDPYP   78 (199)
T ss_dssp             CCGGGSEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSSC
T ss_pred             ccccceeeeeee-cccccccccccccccc---eeeeccCCcc
Confidence            456789999999 8999999999999988   6899988764

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=95.47  E-value=0.0047  Score=42.18  Aligned_cols=37  Identities=24%  Similarity=0.342  Sum_probs=32.0

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~   74 (177)
                      .+.+++|+||+|.+|...++..-..|   .+|+++++++.
T Consensus        31 ~~~~vlV~gasGGVG~~aiQlAk~~G---a~Via~~~~~~   67 (177)
T d1o89a2          31 QDGEIVVTGASGGVGSTAVALLHKLG---YQVVAVSGRES   67 (177)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTT---CCEEEEESCGG
T ss_pred             CCCcEEEEEccccchHHHHHHHHHcC---CCeEEEecchh
Confidence            44589999999999999999998898   68999888753

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.43  E-value=0.085  Score=35.01  Aligned_cols=37  Identities=14%  Similarity=0.100  Sum_probs=30.2

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..|.+++|.|+ |.+|...++.+...|.  .+|++.++++
T Consensus        25 ~~gd~VlI~G~-G~iG~~~~~~a~~~G~--~~Vi~~d~~~   61 (171)
T d1pl8a2          25 TLGHKVLVCGA-GPIGMVTLLVAKAMGA--AQVVVTDLSA   61 (171)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEEESCH
T ss_pred             CCCCEEEEECC-CccHHHHHHHHHHcCC--ceEEeccCCH
Confidence            35678999986 9999999988888873  5899988765

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=95.37  E-value=0.056  Score=36.10  Aligned_cols=39  Identities=18%  Similarity=0.014  Sum_probs=31.1

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~   74 (177)
                      ...|.+|+|.|+ |.+|...+..+...|.  ..|++.++++.
T Consensus        26 vk~GdtVlV~Ga-GG~G~~~~~~~~~~g~--~~Vi~~~~~~~   64 (176)
T d2jhfa2          26 VTQGSTCAVFGL-GGVGLSVIMGCKAAGA--ARIIGVDINKD   64 (176)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEECSCGG
T ss_pred             CCCCCEEEEECC-CCcHHHHHHHHHHcCC--ceEEeecCcHH
Confidence            446789999998 5689888888888874  68998888763

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=95.37  E-value=0.012  Score=38.95  Aligned_cols=37  Identities=16%  Similarity=0.265  Sum_probs=31.4

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .||+|+|.| +|++|..++..|.+.++++ +|+++.+++
T Consensus         1 ~gkrivIvG-gG~~G~e~A~~l~~~~~~~-~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVG-GGTGGATAAKYIKLADPSI-EVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHHCTTS-EEEEECSCS
T ss_pred             CCCcEEEEC-ccHHHHHHHHHHHHcCCCC-cEEEEECCC
Confidence            489999999 7999999999999998654 788887665

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=95.35  E-value=0.025  Score=38.11  Aligned_cols=37  Identities=19%  Similarity=0.082  Sum_probs=29.7

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..|.+|+|.|+ |.+|...++.+...|.  .+|++.++++
T Consensus        26 ~~g~~VlI~Ga-G~vGl~~~q~ak~~Ga--~~Vi~~d~~~   62 (174)
T d1jqba2          26 EMGSSVVVIGI-GAVGLMGIAGAKLRGA--GRIIGVGSRP   62 (174)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHTTTC--SCEEEECCCH
T ss_pred             CCCCEEEEEcC-Ccchhhhhhhhhcccc--cccccccchh
Confidence            45779999985 9999998888887774  5788888764

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=95.33  E-value=0.062  Score=35.92  Aligned_cols=37  Identities=11%  Similarity=-0.033  Sum_probs=28.8

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..|.+|+|.|+ |.+|...++.+...|.  ..|++.++++
T Consensus        27 ~~g~~VlI~G~-G~iG~~~~~~ak~~g~--~~v~~~~~~~   63 (174)
T d1f8fa2          27 TPASSFVTWGA-GAVGLSALLAAKVCGA--SIIIAVDIVE   63 (174)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHHTC--SEEEEEESCH
T ss_pred             CCCCEEEEeCC-CHHHhhhhhccccccc--ceeeeeccHH
Confidence            45789999987 8999999988888874  4666666654

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.29  E-value=0.036  Score=35.09  Aligned_cols=34  Identities=24%  Similarity=0.235  Sum_probs=28.5

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .++++|.| +|+||..++..|.+.|   .+|..+.|++
T Consensus        20 P~~vvIIG-gG~iG~E~A~~l~~lG---~~Vtii~~~~   53 (122)
T d1h6va2          20 PGKTLVVG-ASYVALECAGFLAGIG---LDVTVMVRSI   53 (122)
T ss_dssp             CCSEEEEC-CSHHHHHHHHHHHHTT---CCEEEEESSS
T ss_pred             CCeEEEEC-CCccHHHHHHHHhhcC---CeEEEEEech
Confidence            36889998 7999999999999999   5677777764

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=95.14  E-value=0.077  Score=35.65  Aligned_cols=39  Identities=18%  Similarity=0.029  Sum_probs=32.2

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~   74 (177)
                      ...|.+|+|+|+ |.+|...++.+...|.  .+|+++++++.
T Consensus        27 ~~~g~tVlI~G~-GgvGl~ai~~ak~~G~--~~Vi~vd~~~~   65 (176)
T d1d1ta2          27 VKPGSTCVVFGL-GGVGLSVIMGCKSAGA--SRIIGIDLNKD   65 (176)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEECSCGG
T ss_pred             CCCCCEEEEECC-CchhHHHHHHHHHcCC--ceEEEecCcHH
Confidence            345789999985 9999999999988874  68999998764

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=95.01  E-value=0.028  Score=35.81  Aligned_cols=70  Identities=10%  Similarity=0.127  Sum_probs=47.3

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESEH  116 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~  116 (177)
                      |+++|.| .|-+|..+++.|...     .|++++.++.      +.+....               ..+.++.+|.+++ 
T Consensus         1 kHivI~G-~g~~g~~l~~~L~~~-----~i~vi~~d~~------~~~~~~~---------------~~~~~i~Gd~~~~-   52 (129)
T d2fy8a1           1 RHVVICG-WSESTLECLRELRGS-----EVFVLAEDEN------VRKKVLR---------------SGANFVHGDPTRV-   52 (129)
T ss_dssp             CCEEEES-CCHHHHHHHHTSCGG-----GEEEEESCTT------HHHHHHH---------------TTCEEEESCTTSH-
T ss_pred             CEEEEEC-CCHHHHHHHHHHcCC-----CCEEEEcchH------HHHHHHh---------------cCccccccccCCH-
Confidence            5788888 577899999998533     4566666542      2222211               4678999999997 


Q ss_pred             CCCCHHHHHHH-hcCCcEEEEcCc
Q psy17489        117 LGLSEDSEQLI-KSKVNIIFHCAA  139 (177)
Q Consensus       117 ~~~~~~~~~~~-~~~~d~vi~~aa  139 (177)
                           +.+.++ +++++.++-+..
T Consensus        53 -----~~L~~a~i~~A~~vi~~~~   71 (129)
T d2fy8a1          53 -----SDLEKANVRGARAVIVNLE   71 (129)
T ss_dssp             -----HHHHHTTCTTCSEEEECCS
T ss_pred             -----HHHHHhhhhcCcEEEEecc
Confidence                 666664 457888887643

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=94.98  E-value=0.049  Score=35.63  Aligned_cols=34  Identities=24%  Similarity=0.256  Sum_probs=28.8

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      |+|.+.| .|-+|.++++.|++.|.  .+|++.+|++
T Consensus         1 MkI~fIG-~G~MG~ai~~~l~~~~~--~~i~v~~r~~   34 (152)
T d1yqga2           1 MNVYFLG-GGNMAAAVAGGLVKQGG--YRIYIANRGA   34 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHCS--CEEEEECSSH
T ss_pred             CEEEEEc-CcHHHHHHHHHHHHCCC--CcEEEEeCCh
Confidence            5788887 59999999999999874  6888888875

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.89  E-value=0.098  Score=34.43  Aligned_cols=37  Identities=11%  Similarity=0.008  Sum_probs=30.0

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ...|.+++|.|+ |.+|...++.+...|   .+|+++++++
T Consensus        25 ~~~g~~VlV~Ga-G~vG~~~~~~ak~~G---~~Vi~~~~~~   61 (166)
T d1llua2          25 ARPGQWVAISGI-GGLGHVAVQYARAMG---LHVAAIDIDD   61 (166)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTT---CEEEEEESCH
T ss_pred             CCCCCEEEEeec-cccHHHHHHHHHHcC---Cccceecchh
Confidence            345789999886 889999888887777   6899998864

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=94.87  E-value=0.063  Score=33.65  Aligned_cols=36  Identities=22%  Similarity=0.227  Sum_probs=30.9

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~   74 (177)
                      -.++++|.| +|+||..++..|.+.|   ..|..+.+.+.
T Consensus        21 ~p~~i~IiG-~G~ig~E~A~~l~~~G---~~Vtiv~~~~~   56 (119)
T d3lada2          21 VPGKLGVIG-AGVIGLELGSVWARLG---AEVTVLEAMDK   56 (119)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHTT---CEEEEEESSSS
T ss_pred             CCCeEEEEC-CChHHHHHHHHHHHcC---CceEEEEeecc
Confidence            347899999 7999999999999999   68888887653

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=94.84  E-value=0.11  Score=35.24  Aligned_cols=39  Identities=10%  Similarity=-0.005  Sum_probs=33.0

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~   74 (177)
                      ..+.++++.|.| .|.||+.+++.|...|   .+|+..++...
T Consensus        40 ~~l~~~~vgiiG-~G~IG~~va~~l~~fg---~~v~~~d~~~~   78 (188)
T d2naca1          40 YDLEAMHVGTVA-AGRIGLAVLRRLAPFD---VHLHYTDRHRL   78 (188)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHGGGT---CEEEEECSSCC
T ss_pred             eeccccceeecc-ccccchhhhhhhhccC---ceEEEEeeccc
Confidence            346789999999 8999999999999888   58888887653

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=94.82  E-value=0.032  Score=35.25  Aligned_cols=45  Identities=22%  Similarity=0.338  Sum_probs=34.0

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHH
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKN   84 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~   84 (177)
                      +++++|.| +|++|..++..|.+.|   .+|..+.|.+.-....+.+.+
T Consensus        32 ~~~vvIiG-gG~iG~E~A~~l~~~g---~~Vtlv~~~~~l~~~d~~~~~   76 (122)
T d1xhca2          32 SGEAIIIG-GGFIGLELAGNLAEAG---YHVKLIHRGAMFLGLDEELSN   76 (122)
T ss_dssp             HSEEEEEE-CSHHHHHHHHHHHHTT---CEEEEECSSSCCTTCCHHHHH
T ss_pred             CCcEEEEC-CcHHHHHHHHHhhccc---ceEEEEeccccccCCCHHHHH
Confidence            46888888 7999999999999999   688888887654333344433

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=94.77  E-value=0.049  Score=36.02  Aligned_cols=33  Identities=24%  Similarity=0.342  Sum_probs=28.6

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      |+|-|.| .|.+|..+++.|++.|   ..|++.+|++
T Consensus         1 MkIgiIG-lG~MG~~~A~~L~~~G---~~V~~~d~~~   33 (161)
T d1vpda2           1 MKVGFIG-LGIMGKPMSKNLLKAG---YSLVVSDRNP   33 (161)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTT---CEEEEECSCH
T ss_pred             CEEEEEe-hhHHHHHHHHHHHHCC---CeEEEEeCCc
Confidence            5688887 7999999999999999   5888888864

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.76  E-value=0.036  Score=36.45  Aligned_cols=33  Identities=21%  Similarity=0.196  Sum_probs=27.5

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      |++.+.| +|-+|++++..|.+.|   .++++.+|+.
T Consensus         1 MkIg~IG-~G~mG~al~~~l~~~~---~~i~v~~r~~   33 (152)
T d2ahra2           1 MKIGIIG-VGKMASAIIKGLKQTP---HELIISGSSL   33 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTTSS---CEEEEECSSH
T ss_pred             CEEEEEe-ccHHHHHHHHHHHhCC---CeEEEEcChH
Confidence            4678886 8999999999999987   5888877764

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=94.68  E-value=0.21  Score=30.86  Aligned_cols=70  Identities=14%  Similarity=0.092  Sum_probs=50.2

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      ...+|.|.| +|-+|+-++....+.|   .++++++.+++....                       .---.++.+|+.|
T Consensus        10 ~~~kigIlG-gGQL~rMla~aA~~lG---~~v~v~d~~~~~PA~-----------------------~va~~~i~~~~~d   62 (111)
T d1kjqa2          10 AATRVMLLG-SGELGKEVAIECQRLG---VEVIAVDRYADAPAM-----------------------HVAHRSHVINMLD   62 (111)
T ss_dssp             TCCEEEEES-CSHHHHHHHHHHHTTT---CEEEEEESSTTCGGG-----------------------GGSSEEEECCTTC
T ss_pred             CCCEEEEEe-CCHHHHHHHHHHHHCC---CEEEEEcCCCCCchh-----------------------hcCCeEEECCCCC
Confidence            445899999 7899999999999999   588888887643210                       0112567789888


Q ss_pred             CCCCCCHHHHHHHhc--CCcEEEEc
Q psy17489        115 EHLGLSEDSEQLIKS--KVNIIFHC  137 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~--~~d~vi~~  137 (177)
                      .      +.+..+..  ++|+|-.-
T Consensus        63 ~------~~l~~~~~~~~~DviT~E   81 (111)
T d1kjqa2          63 G------DALRRVVELEKPHYIVPE   81 (111)
T ss_dssp             H------HHHHHHHHHHCCSEEEEC
T ss_pred             H------HHHHHHHHhhCCceEEEE
Confidence            7      66666553  57887544

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=94.55  E-value=0.033  Score=35.23  Aligned_cols=36  Identities=14%  Similarity=0.242  Sum_probs=31.2

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~   74 (177)
                      .+++++|.| +|++|..++..|.+.|   .+|..+.+.+.
T Consensus        29 ~~~~vvIIG-gG~iG~E~A~~l~~~g---~~Vtli~~~~~   64 (121)
T d1d7ya2          29 PQSRLLIVG-GGVIGLELAATARTAG---VHVSLVETQPR   64 (121)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEEESSSS
T ss_pred             cCCeEEEEC-cchhHHHHHHHhhccc---ceEEEEeeccc
Confidence            357888888 7999999999999998   68999988764

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.45  E-value=0.035  Score=34.69  Aligned_cols=35  Identities=17%  Similarity=0.200  Sum_probs=30.6

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~   74 (177)
                      .++++|.| +|++|..++..|.+.|   .+|.++.|.+.
T Consensus        22 p~~v~IiG-gG~ig~E~A~~l~~~G---~~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIG-GGYIGIELGTAYANFG---TKVTILEGAGE   56 (117)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTT---CEEEEEESSSS
T ss_pred             CCeEEEEC-CCccceeeeeeecccc---cEEEEEEecce
Confidence            47899998 7999999999999999   68888888764

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=94.40  E-value=0.024  Score=37.60  Aligned_cols=33  Identities=27%  Similarity=0.285  Sum_probs=28.5

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      |+|.|.| .|.+|..+++.|.+.|   .+|++.+|++
T Consensus         1 MkI~iIG-~G~mG~~lA~~l~~~g---~~V~~~d~~~   33 (165)
T d2f1ka2           1 MKIGVVG-LGLIGASLAGDLRRRG---HYLIGVSRQQ   33 (165)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSCH
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCC---CEEEEEECCc
Confidence            5788887 5999999999999999   5888888864

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=94.37  E-value=0.26  Score=33.52  Aligned_cols=38  Identities=13%  Similarity=0.099  Sum_probs=32.0

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..+.|+++.|.| .|.||+.+++.+...|   .+|+..++..
T Consensus        43 ~~l~g~tvgIiG-~G~IG~~va~~l~~fg---~~v~~~d~~~   80 (191)
T d1gdha1          43 EKLDNKTLGIYG-FGSIGQALAKRAQGFD---MDIDYFDTHR   80 (191)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHTTT---CEEEEECSSC
T ss_pred             ceecccceEEee-cccchHHHHHHHHhhc---cccccccccc
Confidence            446799999999 8999999999999888   5888877654

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.36  E-value=0.039  Score=34.93  Aligned_cols=37  Identities=11%  Similarity=0.237  Sum_probs=31.2

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~   74 (177)
                      ..+++++|.| +|++|..++..|.+.|   .+|..+.+.+.
T Consensus        28 ~~~k~vvViG-gG~iG~E~A~~l~~~g---~~Vtlie~~~~   64 (123)
T d1nhpa2          28 PEVNNVVVIG-SGYIGIEAAEAFAKAG---KKVTVIDILDR   64 (123)
T ss_dssp             TTCCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEEESSSS
T ss_pred             cCCCEEEEEC-ChHHHHHHHHHhhccc---eEEEEEEecCc
Confidence            3567899987 7999999999999999   68888888653

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=94.35  E-value=0.16  Score=33.54  Aligned_cols=38  Identities=18%  Similarity=-0.020  Sum_probs=29.7

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ...|.+|+|.|+ |++|...++.+...|.  ..|++.++++
T Consensus        26 ~~~G~tVlI~Ga-GGvG~~aiq~ak~~G~--~~vi~~~~~~   63 (176)
T d2fzwa2          26 LEPGSVCAVFGL-GGVGLAVIMGCKVAGA--SRIIGVDINK   63 (176)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHHTC--SEEEEECSCG
T ss_pred             CCCCCEEEEecc-hhHHHHHHHHHHHHhc--CceEEEcccH
Confidence            345789999997 5789999999988884  5777777654

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.35  E-value=0.033  Score=38.38  Aligned_cols=33  Identities=15%  Similarity=0.124  Sum_probs=28.6

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      |+|.|.| .|++|..++..|++.|   .+|++.+.++
T Consensus         1 MkI~ViG-lG~vGl~~a~~la~~g---~~V~g~D~n~   33 (202)
T d1mv8a2           1 MRISIFG-LGYVGAVCAGCLSARG---HEVIGVDVSS   33 (202)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTT---CEEEEECSCH
T ss_pred             CEEEEEC-CCHhHHHHHHHHHhCC---CcEEEEeCCH
Confidence            5788885 9999999999999999   5899988753

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=94.22  E-value=0.28  Score=29.44  Aligned_cols=39  Identities=21%  Similarity=-0.022  Sum_probs=29.9

Q ss_pred             cccCCCceEEEecCCcchH-HHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         31 DDFYRDGQILVTGGTGFMG-KLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        31 ~~~~~~~~vlVtG~~G~iG-~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      +.+.+.+++.+.|-+ ++| +.|++.|.++|   ..|...++..
T Consensus         3 ~~~~~~~~ihfiGig-G~GMs~LA~~L~~~G---~~VsGSD~~~   42 (96)
T d1p3da1           3 PEMRRVQQIHFIGIG-GAGMSGIAEILLNEG---YQISGSDIAD   42 (96)
T ss_dssp             CCCTTCCEEEEETTT-STTHHHHHHHHHHHT---CEEEEEESCC
T ss_pred             ccchhCCEEEEEEEC-HHHHHHHHHHHHhCC---CEEEEEeCCC
Confidence            345567889999844 455 77899999999   5899888764

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=94.22  E-value=0.17  Score=33.70  Aligned_cols=38  Identities=18%  Similarity=-0.048  Sum_probs=31.6

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ...|.+|+|.|+ |.+|...++.+...|.  .+|++.++++
T Consensus        25 ~~~G~~VlV~Ga-GgvGl~a~~~ak~~G~--~~Vi~~d~~~   62 (174)
T d1p0fa2          25 VTPGSTCAVFGL-GGVGFSAIVGCKAAGA--SRIIGVGTHK   62 (174)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHHTC--SEEEEECSCG
T ss_pred             CCCCCEEEEECC-CchhHHHHHHHHHcCC--ceeeccCChH
Confidence            446789999985 8999999999988884  6899988865

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=94.18  E-value=0.036  Score=34.82  Aligned_cols=36  Identities=25%  Similarity=0.409  Sum_probs=31.2

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~   74 (177)
                      +.++++|.| +|++|..++..|.+.|   .+|..+.|.+.
T Consensus        21 ~p~~v~IiG-gG~iG~E~A~~l~~~g---~~Vtlv~~~~~   56 (117)
T d1onfa2          21 ESKKIGIVG-SGYIAVELINVIKRLG---IDSYIFARGNR   56 (117)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHTTT---CEEEEECSSSS
T ss_pred             CCCEEEEEC-CchHHHHHHHHHHhcc---ccceeeehhcc
Confidence            357899998 7999999999999998   68999988653

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.10  E-value=0.11  Score=35.27  Aligned_cols=38  Identities=13%  Similarity=0.048  Sum_probs=31.9

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..+.++++.|.| .|.||+.+++.+...|   .+|+..++..
T Consensus        40 ~~l~~k~vgiiG-~G~IG~~va~~~~~fg---~~v~~~d~~~   77 (184)
T d1ygya1          40 TEIFGKTVGVVG-LGRIGQLVAQRIAAFG---AYVVAYDPYV   77 (184)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHTTT---CEEEEECTTS
T ss_pred             ccccceeeeecc-ccchhHHHHHHhhhcc---ceEEeecCCC
Confidence            346789999998 8999999999999887   6888887754

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=94.07  E-value=0.18  Score=33.32  Aligned_cols=36  Identities=14%  Similarity=0.255  Sum_probs=28.2

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .|.+++|.|+ |.+|...++.+...|.  ..|++.++++
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~--~~vv~~~~~~   67 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTP--ATVIALDVKE   67 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCC--CEEEEEESSH
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcC--cccccccchh
Confidence            4678999885 9999998888887874  5777777754

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.06  E-value=0.037  Score=37.95  Aligned_cols=35  Identities=17%  Similarity=0.261  Sum_probs=31.1

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .-++|.|.|+ |.+|..++..++..|   ..|++.++++
T Consensus         3 ~IkkvaViGa-G~mG~~iA~~~a~~G---~~V~l~D~~~   37 (192)
T d1f0ya2           3 IVKHVTVIGG-GLMGAGIAQVAAATG---HTVVLVDQTE   37 (192)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTT---CEEEEECSCH
T ss_pred             eeEEEEEECc-CHHHHHHHHHHHhCC---CcEEEEECCh
Confidence            4579999996 999999999999999   5899998875

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=93.89  E-value=0.14  Score=36.02  Aligned_cols=37  Identities=22%  Similarity=0.301  Sum_probs=31.4

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      .+++.+|+|.| .|++|++++..|...|.  .++++++.+
T Consensus        27 kL~~~~VliiG-~GglGs~va~~La~~Gv--g~i~lvD~D   63 (247)
T d1jw9b_          27 ALKDSRVLIVG-LGGLGCAASQYLASAGV--GNLTLLDFD   63 (247)
T ss_dssp             HHHHCEEEEEC-CSHHHHHHHHHHHHHTC--SEEEEECCC
T ss_pred             HHhCCCEEEEC-CCHHHHHHHHHHHHcCC--CeEEEECCc
Confidence            46678999999 67799999999999984  788888753

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.79  E-value=0.047  Score=34.46  Aligned_cols=34  Identities=12%  Similarity=0.144  Sum_probs=30.0

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .++++|.| +|+||..++..|.+.|   .+|..+.+++
T Consensus        23 p~~~vIiG-~G~ig~E~A~~l~~lG---~~Vtii~~~~   56 (122)
T d1v59a2          23 PKRLTIIG-GGIIGLEMGSVYSRLG---SKVTVVEFQP   56 (122)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSSS
T ss_pred             CCeEEEEC-CCchHHHHHHHHHhhC---cceeEEEecc
Confidence            46899999 7999999999999999   6898888765

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=93.77  E-value=0.2  Score=33.45  Aligned_cols=39  Identities=15%  Similarity=0.017  Sum_probs=31.1

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~   74 (177)
                      ...|.+|+|.| .|.+|...++.+...|.  ..|++.++++.
T Consensus        26 v~~G~~VlV~G-~G~iGl~a~~~ak~~Ga--~~Vi~~d~~~~   64 (174)
T d1e3ia2          26 VTPGSTCAVFG-LGCVGLSAIIGCKIAGA--SRIIAIDINGE   64 (174)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTC--SEEEEECSCGG
T ss_pred             CCCCCEEEEEC-CChHHHHHHHHHHHhCC--ceeeeeccchH
Confidence            34578999997 59999999999988884  57888887653

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.72  E-value=0.027  Score=43.61  Aligned_cols=37  Identities=27%  Similarity=0.286  Sum_probs=30.4

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      .+++.+|+|.|+ |++|..+++.|...|.  .++.+++.+
T Consensus        34 ~l~~~kVlvvG~-GglG~ei~k~L~~~Gv--g~i~lvD~D   70 (426)
T d1yovb1          34 LLDTCKVLVIGA-GGLGCELLKNLALSGF--RQIHVIDMD   70 (426)
T ss_dssp             HHHHCCEEEECS-STTHHHHHHHHHTTTC--CCEEEECCC
T ss_pred             HHhcCeEEEECC-CHHHHHHHHHHHHcCC--CeEEEEECC
Confidence            356789999996 5699999999999884  688888764

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=93.71  E-value=0.054  Score=33.68  Aligned_cols=35  Identities=14%  Similarity=0.237  Sum_probs=29.9

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~   74 (177)
                      +++++|.| +|++|..++..|.+.|   .+|.++.+.+.
T Consensus        21 p~~vvIiG-gG~~G~E~A~~l~~~g---~~Vtlve~~~~   55 (115)
T d1lvla2          21 PQHLVVVG-GGYIGLELGIAYRKLG---AQVSVVEARER   55 (115)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHHT---CEEEEECSSSS
T ss_pred             CCeEEEEC-CCHHHHHHHHHHhhcc---cceEEEeeecc
Confidence            46888887 8999999999999999   68888888653

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=93.64  E-value=0.037  Score=36.52  Aligned_cols=38  Identities=21%  Similarity=0.336  Sum_probs=30.1

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~   74 (177)
                      +|++.|.|+||.||...++-+.+. ++-.+|++++-...
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~-~d~f~v~~lsa~~N   39 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERN-LDRYQVIALTANRN   39 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHT-GGGEEEEEEEESSC
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcC-CCCcEEEEEEeCCC
Confidence            589999999999999999988775 33358888776543

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.57  E-value=0.19  Score=32.81  Aligned_cols=36  Identities=8%  Similarity=-0.038  Sum_probs=28.5

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..+.+++|.|+ |.+|...++.+...|   .+|++.++++
T Consensus        26 ~~g~~vlv~G~-G~iG~~a~~~a~~~g---~~v~~~~~~~   61 (168)
T d1rjwa2          26 KPGEWVAIYGI-GGLGHVAVQYAKAMG---LNVVAVDIGD   61 (168)
T ss_dssp             CTTCEEEEECC-STTHHHHHHHHHHTT---CEEEEECSCH
T ss_pred             CCCCEEEEeec-ccchhhhhHHHhcCC---CeEeccCCCH
Confidence            35789999875 889998888888887   5788887654

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.48  E-value=0.045  Score=36.60  Aligned_cols=39  Identities=23%  Similarity=0.129  Sum_probs=34.5

Q ss_pred             cccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         31 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        31 ~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..++.||+++|.| .|.+|+.+++.+...|   .+|++...++
T Consensus        19 ~~~l~Gk~v~V~G-yG~iG~g~A~~~rg~G---~~V~v~e~dp   57 (163)
T d1li4a1          19 DVMIAGKVAVVAG-YGDVGKGCAQALRGFG---ARVIITEIDP   57 (163)
T ss_dssp             CCCCTTCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSCH
T ss_pred             CceecCCEEEEec-cccccHHHHHHHHhCC---CeeEeeeccc
Confidence            4567899999999 9999999999999999   7999888754

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.40  E-value=0.06  Score=34.05  Aligned_cols=35  Identities=20%  Similarity=0.367  Sum_probs=30.5

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~   74 (177)
                      .++++|.| +|++|..++..|.+.|   .+|..+.|++.
T Consensus        22 pk~vvIvG-gG~iG~E~A~~l~~~G---~~Vtlv~~~~~   56 (125)
T d3grsa2          22 PGRSVIVG-AGYIAVEMAGILSALG---SKTSLMIRHDK   56 (125)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSSSS
T ss_pred             CCEEEEEc-CCccHHHHHHHHhcCC---cEEEEEeeccc
Confidence            37899999 7899999999999999   68999988753

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=93.37  E-value=0.063  Score=33.47  Aligned_cols=34  Identities=15%  Similarity=0.123  Sum_probs=29.6

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .++++|.| +|++|..++..|.+.|   .+|..+.|.+
T Consensus        21 p~~vvIiG-gG~ig~E~A~~l~~~G---~~Vtlve~~~   54 (116)
T d1gesa2          21 PERVAVVG-AGYIGVELGGVINGLG---AKTHLFEMFD   54 (116)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSSS
T ss_pred             CCEEEEEC-CChhhHHHHHHhhccc---cEEEEEeecc
Confidence            36888888 7999999999999999   6888888875

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=93.28  E-value=0.066  Score=34.29  Aligned_cols=36  Identities=14%  Similarity=0.365  Sum_probs=31.3

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~   74 (177)
                      .+++++|.| +|++|..++..|.+.|   .+|..+.+.+.
T Consensus        34 ~~k~v~VIG-gG~iG~E~A~~l~~~g---~~Vtvie~~~~   69 (133)
T d1q1ra2          34 ADNRLVVIG-GGYIGLEVAATAIKAN---MHVTLLDTAAR   69 (133)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSSSS
T ss_pred             cCCEEEEEC-CchHHHHHHHHHHhhC---cceeeeeeccc
Confidence            468999998 8999999999999999   68888888654

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=93.27  E-value=0.061  Score=35.47  Aligned_cols=38  Identities=24%  Similarity=0.336  Sum_probs=29.9

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~   74 (177)
                      +|++.|.|+||.||...+.-+.+. ++--+|++++-...
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~-~d~f~v~~Lsa~~N   38 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHN-PEHFRVVALVAGKN   38 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHC-TTTEEEEEEEESSC
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhC-CCCcEEEEEEecCc
Confidence            478999999999999999988776 34457887775443

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=93.25  E-value=0.082  Score=32.94  Aligned_cols=36  Identities=11%  Similarity=0.005  Sum_probs=30.7

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~   74 (177)
                      .+++++|.| +|++|..++..|.+.|   ..|..+.|.+.
T Consensus        21 ~~~~vvVvG-gG~ig~E~A~~l~~~g---~~vt~i~~~~~   56 (121)
T d1mo9a2          21 PGSTVVVVG-GSKTAVEYGCFFNATG---RRTVMLVRTEP   56 (121)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSSCT
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhcc---hhheEeeccch
Confidence            468899888 8999999999999998   68888888653

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=93.01  E-value=0.063  Score=33.87  Aligned_cols=35  Identities=14%  Similarity=0.212  Sum_probs=30.8

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~   74 (177)
                      .++++|.| +|++|..++..|.+.|   .+|..+.|++.
T Consensus        25 p~~~viiG-~G~iglE~A~~~~~~G---~~Vtvi~~~~~   59 (123)
T d1dxla2          25 PKKLVVIG-AGYIGLEMGSVWGRIG---SEVTVVEFASE   59 (123)
T ss_dssp             CSEEEESC-CSHHHHHHHHHHHHHT---CEEEEECSSSS
T ss_pred             CCeEEEEc-cchHHHHHHHHHHhcC---CeEEEEEEccc
Confidence            47899998 7999999999999999   68999888763

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=92.92  E-value=0.11  Score=35.16  Aligned_cols=37  Identities=19%  Similarity=0.149  Sum_probs=30.2

Q ss_pred             CCceEEE-ecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489         35 RDGQILV-TGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        35 ~~~~vlV-tG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~   74 (177)
                      .|.+++| +||+|.+|...++.....|   .+|++.+|+++
T Consensus        28 ~g~~vli~~ga~g~vG~~aiqlAk~~G---a~vI~~v~~~~   65 (189)
T d1gu7a2          28 PGKDWFIQNGGTSAVGKYASQIGKLLN---FNSISVIRDRP   65 (189)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHT---CEEEEEECCCT
T ss_pred             CCCEEEEEeCCCchHHHHHHHHHhhcC---CeEEEEEeccc
Confidence            4666666 6899999999999988888   68999888653

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=92.85  E-value=0.083  Score=33.48  Aligned_cols=34  Identities=15%  Similarity=0.192  Sum_probs=30.2

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .++++|.| +|+||..++..|.+.|   .+|..+.+.+
T Consensus        26 p~~vvIiG-gG~IG~E~A~~~~~~G---~~Vtive~~~   59 (125)
T d1ojta2          26 PGKLLIIG-GGIIGLEMGTVYSTLG---SRLDVVEMMD   59 (125)
T ss_dssp             CSEEEEES-CSHHHHHHHHHHHHHT---CEEEEECSSS
T ss_pred             CCeEEEEC-CCHHHHHHHHHhhcCC---CEEEEEEeec
Confidence            57899999 7999999999999999   6888888765

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=92.81  E-value=0.29  Score=32.33  Aligned_cols=36  Identities=22%  Similarity=0.304  Sum_probs=26.3

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      ..+|+|.|++|-+|+.+++.+.+.. ++.-+-+++|.
T Consensus         4 ~ikI~i~Ga~GrMG~~i~~~i~~~~-~~~lv~~~~~~   39 (162)
T d1diha1           4 NIRVAIAGAGGRMGRQLIQAALALE-GVQLGAALERE   39 (162)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHST-TEECCCEECCT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCC-CCEEEEEEecc
Confidence            3589999999999999999998863 33223344443

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=92.80  E-value=0.2  Score=33.43  Aligned_cols=76  Identities=8%  Similarity=0.197  Sum_probs=53.1

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLES  114 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~  114 (177)
                      ..-+++|.| .|-.|..-+......|   ..|.+++.+...   .++++..+.               .++.+..   .+
T Consensus        31 ~pa~V~ViG-aGvaG~~A~~~A~~lG---A~V~~~D~~~~~---l~~l~~~~~---------------~~~~~~~---~~   85 (168)
T d1pjca1          31 KPGKVVILG-GGVVGTEAAKMAVGLG---AQVQIFDINVER---LSYLETLFG---------------SRVELLY---SN   85 (168)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEEESCHHH---HHHHHHHHG---------------GGSEEEE---CC
T ss_pred             CCcEEEEEC-CChHHHHHHHHHhhCC---CEEEEEeCcHHH---HHHHHHhhc---------------ccceeeh---hh
Confidence            346899999 7889999999999999   799999986521   133333322               2333332   22


Q ss_pred             CCCCCCHHHHHHHhcCCcEEEEcCccc
Q psy17489        115 EHLGLSEDSEQLIKSKVNIIFHCAASL  141 (177)
Q Consensus       115 ~~~~~~~~~~~~~~~~~d~vi~~aa~~  141 (177)
                      .      +.+.+.+.++|+||.++-+.
T Consensus        86 ~------~~l~~~~~~aDivI~aalip  106 (168)
T d1pjca1          86 S------AEIETAVAEADLLIGAVLVP  106 (168)
T ss_dssp             H------HHHHHHHHTCSEEEECCCCT
T ss_pred             h------hhHHHhhccCcEEEEeeecC
Confidence            2      56788889999999998754

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=92.65  E-value=0.51  Score=31.91  Aligned_cols=38  Identities=11%  Similarity=0.019  Sum_probs=28.8

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ...|.+|+|.|+ |.+|...++.+...|.  .+|++.++++
T Consensus        23 v~~G~tVlV~Ga-G~vGl~a~~~ak~~ga--~~Vi~~d~~~   60 (195)
T d1kola2          23 VGPGSTVYVAGA-GPVGLAAAASARLLGA--AVVIVGDLNP   60 (195)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEEESCH
T ss_pred             CCCCCEEEEECc-CHHHHHHHHHHHhhcc--cceeeecccc
Confidence            346789999985 8999777777766663  6888888764

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=92.60  E-value=0.39  Score=31.91  Aligned_cols=84  Identities=11%  Similarity=0.045  Sum_probs=44.4

Q ss_pred             CceEEEecCCcchHHH--HHHHHHh-hCCCcCeEEEEEeCCCCCChHH-HHHHHHhhhhhhcccccCcccCCCeEEEeCC
Q psy17489         36 DGQILVTGGTGFMGKL--LIDKLLR-SFPDIGAIYIMVRDKKGSSPEE-RVKNMLNSVIFDRLNKEVPDFRSKIQVIPSN  111 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~--l~~~L~~-~g~~~~~v~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  111 (177)
                      .+++.|.|| |.+|+.  ++..|+. .+....+++.++.++...+... .+.+...     .       ......+... 
T Consensus         2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~-----~-------~~~~~~i~~~-   67 (171)
T d1obba1           2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVE-----E-------VGADLKFEKT-   67 (171)
T ss_dssp             CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHH-----H-------TTCCCEEEEE-
T ss_pred             CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHH-----h-------cCCCeEEEEe-
Confidence            368999996 777754  3444443 2222258999988752211111 1111111     0       1122333221 


Q ss_pred             CCCCCCCCCHHHHHHHhcCCcEEEEcCcccCc
Q psy17489        112 LESEHLGLSEDSEQLIKSKVNIIFHCAASLRF  143 (177)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~  143 (177)
                                .+..++++++|+|+..++....
T Consensus        68 ----------td~~eaL~dad~Vv~~~~~g~~   89 (171)
T d1obba1          68 ----------MNLDDVIIDADFVINTAMVGGH   89 (171)
T ss_dssp             ----------SCHHHHHTTCSEEEECCCTTHH
T ss_pred             ----------CChhhcccCCCeEeeecccccc
Confidence                      2356678999999999987543

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=92.58  E-value=0.088  Score=36.35  Aligned_cols=36  Identities=19%  Similarity=0.190  Sum_probs=31.6

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      .++|+++.|-| .|-+|.++++.|.+.|   .+|++.+.+
T Consensus        24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~G---akvvv~d~d   59 (201)
T d1c1da1          24 SLDGLTVLVQG-LGAVGGSLASLAAEAG---AQLLVADTD   59 (201)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSC
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCC---CEEEEecch
Confidence            57899999998 8999999999999999   688877654

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=92.53  E-value=0.76  Score=30.39  Aligned_cols=19  Identities=5%  Similarity=0.027  Sum_probs=15.7

Q ss_pred             HHHHhcCCcEEEEcCcccC
Q psy17489        124 EQLIKSKVNIIFHCAASLR  142 (177)
Q Consensus       124 ~~~~~~~~d~vi~~aa~~~  142 (177)
                      ..++++++|+||..++...
T Consensus        71 ~~eal~~AD~Vvitag~~~   89 (167)
T d1u8xx1          71 PEEAFTDVDFVMAHIRVGK   89 (167)
T ss_dssp             HHHHHSSCSEEEECCCTTH
T ss_pred             hhhccCCCCEEEECCCcCC
Confidence            4667789999999999754

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=92.46  E-value=0.059  Score=36.65  Aligned_cols=35  Identities=20%  Similarity=0.127  Sum_probs=30.5

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      +-++|.|.|+ |.+|..++..++..|   .+|++.++++
T Consensus         3 ~I~~vaViGa-G~mG~~iA~~~a~~G---~~V~l~D~~~   37 (186)
T d1wdka3           3 DVKQAAVLGA-GIMGGGIAYQSASKG---TPILMKDINE   37 (186)
T ss_dssp             CCSSEEEECC-HHHHHHHHHHHHHTT---CCEEEECSSH
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCC---CeEEEEECCH
Confidence            3478999996 999999999999999   5888988875

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.37  E-value=0.095  Score=34.59  Aligned_cols=34  Identities=24%  Similarity=0.244  Sum_probs=29.1

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      +++|.+.| .|.+|+.+++.|.+.|   +.|++.+|++
T Consensus         1 M~kIg~IG-lG~MG~~iA~~L~~~g---~~v~~~d~~~   34 (162)
T d3cuma2           1 MKQIAFIG-LGHMGAPMATNLLKAG---YLLNVFDLVQ   34 (162)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTT---CEEEEECSSH
T ss_pred             CCEEEEEE-EHHHHHHHHHHHHHCC---CeEEEEECch
Confidence            35788887 8999999999999999   5888888764

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.24  E-value=0.082  Score=35.36  Aligned_cols=37  Identities=19%  Similarity=0.093  Sum_probs=30.7

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~   74 (177)
                      .+++|+|.| +|..|...+..|.+.|+  ..|.++.|++.
T Consensus         3 ~~~kVaIIG-aGpaGl~aA~~l~~~G~--~~V~v~E~~~~   39 (196)
T d1gtea4           3 YSAKIALLG-AGPASISCASFLARLGY--SDITIFEKQEY   39 (196)
T ss_dssp             GGCCEEEEC-CSHHHHHHHHHHHHTTC--CCEEEEESSSS
T ss_pred             CCCEEEEEC-ChHHHHHHHHHHHHCCC--CeEEEEEecCc
Confidence            368999999 79999999999999995  35788887653

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=92.03  E-value=0.1  Score=38.29  Aligned_cols=35  Identities=23%  Similarity=0.423  Sum_probs=30.2

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ++|+|+|.| +|..|...+..|.+.|   .+|.++.+++
T Consensus         1 k~KKI~IIG-aG~sGL~aA~~L~k~G---~~V~viEk~~   35 (314)
T d2bi7a1           1 KSKKILIVG-AGFSGAVIGRQLAEKG---HQVHIIDQRD   35 (314)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHTTT---CEEEEEESSS
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHhCC---CCEEEEECCC
Confidence            368999999 7999999999999998   5888887764

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=91.75  E-value=0.12  Score=34.46  Aligned_cols=33  Identities=21%  Similarity=0.167  Sum_probs=28.3

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      |+|-|.| .|-+|..+++.|++.|   ..|++.+|++
T Consensus         2 MkIGvIG-lG~MG~~ma~~L~~~G---~~V~~~dr~~   34 (178)
T d1pgja2           2 MDVGVVG-LGVMGANLALNIAEKG---FKVAVFNRTY   34 (178)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTT---CCEEEECSSH
T ss_pred             CEEEEEe-ehHHHHHHHHHHHHCC---CeEEEEECCH
Confidence            5788887 9999999999999999   4788888765

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=91.66  E-value=0.1  Score=36.66  Aligned_cols=34  Identities=18%  Similarity=0.133  Sum_probs=29.3

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      +|+|+|+| +|.-|...+..|.+.|   .+|.++.+++
T Consensus         1 ~KkV~IIG-aG~aGL~aA~~La~~G---~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIG-AGVSGLAAAYKLKIHG---LNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTS---CEEEEECSSS
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHhCC---CCEEEEeCCC
Confidence            58999998 7899999999999999   5888887653

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=91.58  E-value=0.39  Score=30.74  Aligned_cols=33  Identities=15%  Similarity=0.193  Sum_probs=24.1

Q ss_pred             eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEe
Q psy17489         38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   71 (177)
Q Consensus        38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r   71 (177)
                      +|.|.|++|-+|+.+++.+.+.. +..-+..+++
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~-~~~l~~~~d~   33 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAAD-DLTLSAELDA   33 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHST-TSEEEEEECT
T ss_pred             CEEEECCCCHHHHHHHHHHHhCC-CCEEEEEEec
Confidence            58999999999999999887763 3333334444

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=91.47  E-value=0.16  Score=35.05  Aligned_cols=33  Identities=27%  Similarity=0.362  Sum_probs=28.8

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      -++|+|+| +|..|...+..|.++|   .+|.++.|.
T Consensus         6 ~~kVvVIG-aGiaGl~~A~~L~~~G---~~V~vier~   38 (268)
T d1c0pa1           6 QKRVVVLG-SGVIGLSSALILARKG---YSVHILARD   38 (268)
T ss_dssp             SCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEEESS
T ss_pred             CCcEEEEC-ccHHHHHHHHHHHHCC---CCEEEEeCC
Confidence            35799999 7999999999999999   588888875

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=91.30  E-value=0.3  Score=31.58  Aligned_cols=35  Identities=20%  Similarity=0.231  Sum_probs=27.9

Q ss_pred             CceEEEe-cCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         36 DGQILVT-GGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        36 ~~~vlVt-G~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ++.++|. .++||+|..++..|.+.|   ++|..+.+.+
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G---~~Vtlv~~~~   74 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAG---HEVTIVSGVH   74 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTT---CEEEEEESSC
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcC---CeEEEEecCC
Confidence            3455554 467999999999999999   6888888865

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=91.30  E-value=0.1  Score=34.99  Aligned_cols=36  Identities=22%  Similarity=0.286  Sum_probs=28.8

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..++|+++|.|+ |+.+++++..|.+.    .+|++..|+.
T Consensus        15 ~~~~k~vlIlGa-GG~arai~~aL~~~----~~i~I~nR~~   50 (177)
T d1nvta1          15 RVKDKNIVIYGA-GGAARAVAFELAKD----NNIIIANRTV   50 (177)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHTSS----SEEEEECSSH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHccc----cceeeehhhh
Confidence            368899999995 66889999998654    4888888875

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=91.05  E-value=0.75  Score=30.07  Aligned_cols=39  Identities=13%  Similarity=-0.022  Sum_probs=28.1

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~   74 (177)
                      ...|.+|+|.|+ |.+|...+..+...|.  ..|++.++++.
T Consensus        26 ~k~g~~VlI~G~-Gg~g~~~~~~~~~~g~--~~Vi~~~~~~~   64 (175)
T d1cdoa2          26 VEPGSTCAVFGL-GAVGLAAVMGCHSAGA--KRIIAVDLNPD   64 (175)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEECSCGG
T ss_pred             CCCCCEEEEEec-CCccchHHHHHHHHhh--chheeecchHH
Confidence            346789999986 5577777777776663  68888888653

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.96  E-value=0.18  Score=33.78  Aligned_cols=36  Identities=14%  Similarity=0.148  Sum_probs=31.3

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEe
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   71 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r   71 (177)
                      .++||+++|.|.+.-+|+.++..|++.|   ++|+....
T Consensus        26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~g---aTVt~~~~   61 (171)
T d1edza1          26 RLYGKKCIVINRSEIVGRPLAALLANDG---ATVYSVDV   61 (171)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTS---CEEEEECS
T ss_pred             CCCCCEEEEECCccccHHHHHHHHHHCC---CEEEEecc
Confidence            5789999999999999999999999998   67776543

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=90.77  E-value=0.21  Score=33.63  Aligned_cols=35  Identities=23%  Similarity=0.373  Sum_probs=28.3

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      |+|+|.| +|++|..++..|.+.+.+ .+|+.+.|.+
T Consensus         1 ~KVvIIG-gG~~G~e~A~~l~~~~~~-~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLG-SSHGGYEAVEELLNLHPD-AEIQWYEKGD   35 (198)
T ss_dssp             CEEEEEC-SSHHHHHHHHHHHHHCTT-SEEEEEESSS
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhcCCC-CeEEEEeCCC
Confidence            5789999 679999999999998654 4788777754

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=90.74  E-value=0.29  Score=30.25  Aligned_cols=38  Identities=21%  Similarity=0.368  Sum_probs=29.4

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~   74 (177)
                      +++++|.|| |++|..++..|.+.|..-.+|..+.|.+.
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~   57 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM   57 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence            478999995 99999999888777643347888887653

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=90.64  E-value=0.17  Score=32.20  Aligned_cols=25  Identities=16%  Similarity=0.094  Sum_probs=22.2

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFP   61 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~   61 (177)
                      |++.|.|++|-+|+.+.+.+.+.|+
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~   25 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGH   25 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCC
Confidence            5799999999999999998888874

>d1vdca2 c.3.1.5 (A:118-243) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=90.59  E-value=0.66  Score=29.31  Aligned_cols=52  Identities=19%  Similarity=0.236  Sum_probs=35.7

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHh
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLN   87 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~   87 (177)
                      +..+||.|+|.|| |.-+..-+..|.+.-   .+|+.+.|++........+.++..
T Consensus        30 ~~frgk~V~VvGg-GdsA~e~A~~L~~~a---~~V~li~r~~~~ra~~~~~~~l~~   81 (130)
T d1vdca2          30 PIFRNKPLAVIGG-GDSAMEEANFLTKYG---SKVYIIHRRDAFRASKIMQQRALS   81 (130)
T ss_dssp             GGGTTSEEEEECC-SHHHHHHHHHHTTTS---SEEEEECSSSSCCSCHHHHHHHHT
T ss_pred             HHhCCCEEEEEcC-chHHHHHHHHHhCCC---CcEEEEEeccccccchhhhhcccc
Confidence            4678999999996 555556666666653   799999888765544444444443

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=90.56  E-value=0.22  Score=32.78  Aligned_cols=35  Identities=20%  Similarity=0.183  Sum_probs=27.1

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEe
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   71 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r   71 (177)
                      ++++|+|.| +|++|..++..|.+.|.++ +|+...+
T Consensus         2 ~~~~VvIIG-gG~~G~e~A~~l~~~g~~v-~v~~~~~   36 (185)
T d1q1ra1           2 ANDNVVIVG-TGLAGVEVAFGLRASGWEG-NIRLVGD   36 (185)
T ss_dssp             CSCEEEEEC-CSHHHHHHHHHHHHTTCCS-EEEEECS
T ss_pred             CCCCEEEEC-CcHHHHHHHHHHHHcCCce-EEEEecC
Confidence            467888888 8999999999999998653 4554444

>d1fl2a2 c.3.1.5 (A:326-451) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=90.14  E-value=0.74  Score=28.79  Aligned_cols=52  Identities=12%  Similarity=0.143  Sum_probs=35.2

Q ss_pred             cccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHH
Q psy17489         31 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNML   86 (177)
Q Consensus        31 ~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~   86 (177)
                      ....+||+|+|.|+ |..+..-+..|.+..   .+|+.+.|.+.........++..
T Consensus        25 ~~~~~gk~V~VvGg-G~sA~~~A~~L~~~a---~~V~li~r~~~~~~~~~~~~~~~   76 (126)
T d1fl2a2          25 GPLFKGKRVAVIGG-GNSGVEAAIDLAGIV---EHVTLLEFAPEMKADQVLQDKLR   76 (126)
T ss_dssp             GGGGBTCEEEEECC-SHHHHHHHHHHHTTB---SEEEEECSSSSCCSCHHHHHHHH
T ss_pred             hhhcCCceEEEEeC-CHHHHHHHHhhhccC---CceEEEecccccccccccccccc
Confidence            35578999999996 655666666777654   79999998875544434444433

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=90.11  E-value=0.24  Score=35.22  Aligned_cols=38  Identities=11%  Similarity=0.145  Sum_probs=31.7

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ...+.|+|+|+| +|..|...+..|.+.|   .+|.++.+++
T Consensus        26 ~~~~pkkV~IIG-aG~aGLsaA~~L~~~G---~~V~vlE~~~   63 (370)
T d2iida1          26 ATSNPKHVVIVG-AGMAGLSAAYVLAGAG---HQVTVLEASE   63 (370)
T ss_dssp             CCSSCCEEEEEC-CBHHHHHHHHHHHHHT---CEEEEECSSS
T ss_pred             CCCCCCeEEEEC-CCHHHHHHHHHHHHCC---CCEEEEeCCC
Confidence            344678999999 7899999999999999   5888887653

>d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.11  E-value=0.68  Score=31.70  Aligned_cols=97  Identities=18%  Similarity=0.212  Sum_probs=54.7

Q ss_pred             CCceEEEecCCcchHHH-H---HHHHHhhC--CCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhccc--ccCcccCCCeE
Q psy17489         35 RDGQILVTGGTGFMGKL-L---IDKLLRSF--PDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLN--KEVPDFRSKIQ  106 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~-l---~~~L~~~g--~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~  106 (177)
                      +.-+++|.||+|.+... |   ...|...|  +.-..|++++|++-..   +.+++...........  ..+.....++.
T Consensus        19 ~~~t~VIFGatGDLA~RKL~PALf~L~~~g~Lp~~~~Iig~aR~~~s~---e~fr~~~~~~~~~~~~~~~~~~~f~~~~~   95 (203)
T d1qkia1          19 DTHIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTV---ADIRKQSEPFFKATPEEKLKLEDFFARNS   95 (203)
T ss_dssp             CCEEEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEBSSCCSC---HHHHHHHSCCTTCCGGGHHHHHHHHTTEE
T ss_pred             CCcEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCcEEEEEECCCCCH---HHHHHHHHHHHhhchhhHHHHHHHHHhhc
Confidence            45689999999998843 2   23334444  2235899999987443   3343333221111100  00111346788


Q ss_pred             EEeCCCCCCCCCCCHHHHHHHhc---------CCcEEEEcCcc
Q psy17489        107 VIPSNLESEHLGLSEDSEQLIKS---------KVNIIFHCAAS  140 (177)
Q Consensus       107 ~~~~D~~~~~~~~~~~~~~~~~~---------~~d~vi~~aa~  140 (177)
                      ++.+|+.++      +.+..+-+         ..+.++++|-+
T Consensus        96 Y~~~d~~~~------~~~~~L~~~l~~~~~~~~~~rifYLAvp  132 (203)
T d1qkia1          96 YVAGQYDDA------ASYQRLNSHMNALHLGSQANRLFYLALP  132 (203)
T ss_dssp             CCBCCTTCH------HHHHHHHHHHHHTTTTTTSEEEEEECSC
T ss_pred             cccCcCCCh------hhHHHHHHHHHHHhcCCCcceEEEEecC
Confidence            999999997      45544311         24578888775

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=90.08  E-value=0.51  Score=31.85  Aligned_cols=97  Identities=15%  Similarity=0.068  Sum_probs=51.3

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLESE  115 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~  115 (177)
                      .-+++|.| .|-.|..-+......|   ..|.+++.+....   ++++.+..+...-.  .+.........-+.-.+++.
T Consensus        29 pa~VvViG-aGvaG~~Aa~~A~~lG---A~V~v~D~~~~~~---~~l~~l~~~~i~~~--~~~~~~~~~~~gyA~~~s~~   99 (183)
T d1l7da1          29 PARVLVFG-VGVAGLQAIATAKRLG---AVVMATDVRAATK---EQVESLGGKFITVD--DEAMKTAETAGGYAKEMGEE   99 (183)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSCSTTH---HHHHHTTCEECCC-----------------------
T ss_pred             CcEEEEEc-CcHHHHHHHHHHHHcC---CEEEEEeccHHHH---HHHHHhhcceEEEe--ccccccccccccchhhcCHH
Confidence            35899999 6889999999999999   7999999876432   44444322111000  00000000000001111111


Q ss_pred             CCCCCHHHHHHHhcCCcEEEEcCccc
Q psy17489        116 HLGLSEDSEQLIKSKVNIIFHCAASL  141 (177)
Q Consensus       116 ~~~~~~~~~~~~~~~~d~vi~~aa~~  141 (177)
                      ......+.+.+.+.++|+||-.+-..
T Consensus       100 ~~~~~~~~l~~~l~~aDlVI~talip  125 (183)
T d1l7da1         100 FRKKQAEAVLKELVKTDIAITTALIP  125 (183)
T ss_dssp             --CCHHHHHHHHHTTCSEEEECCCCT
T ss_pred             HHHHHHHHHHHHHHhhhhheeeeecC
Confidence            12222356667778999999998754

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=89.98  E-value=0.27  Score=35.85  Aligned_cols=37  Identities=19%  Similarity=0.090  Sum_probs=31.5

Q ss_pred             cccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEe
Q psy17489         31 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   71 (177)
Q Consensus        31 ~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r   71 (177)
                      ...++|++++|-| .|-+|.++++.|.+.|   .+|+.++-
T Consensus        31 ~~~L~gktvaIqG-fGnVG~~~A~~L~e~G---akvv~vsD   67 (293)
T d1hwxa1          31 TPGFGDKTFAVQG-FGNVGLHSMRYLHRFG---AKCVAVGE   67 (293)
T ss_dssp             CSSSTTCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEEEE
T ss_pred             CCCCCCCEEEEEC-CCHHHHHHHHHHHHCC---CEEEEEEc
Confidence            3457899999998 7999999999999999   68887754

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=89.83  E-value=0.21  Score=33.17  Aligned_cols=39  Identities=21%  Similarity=0.210  Sum_probs=34.4

Q ss_pred             cccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         31 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        31 ~~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..++.||+++|.| -|.+|+.+++.+...|   .+|++...++
T Consensus        18 ~~~laGk~vvV~G-YG~vGrG~A~~~rg~G---a~V~V~E~DP   56 (163)
T d1v8ba1          18 DFLISGKIVVICG-YGDVGKGCASSMKGLG---ARVYITEIDP   56 (163)
T ss_dssp             CCCCTTSEEEEEC-CSHHHHHHHHHHHHHT---CEEEEECSCH
T ss_pred             CceecCCEEEEec-ccccchhHHHHHHhCC---CEEEEEecCc
Confidence            4568999999999 9999999999999999   7898887754

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=89.77  E-value=1.7  Score=28.34  Aligned_cols=36  Identities=19%  Similarity=0.425  Sum_probs=24.6

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..++.|.| .|.+|+..+..+.+. .++.-|-+.+|++
T Consensus         3 kirvgiiG-~G~ig~~~~~~l~~~-~~~elvav~~~~~   38 (170)
T d1f06a1           3 NIRVAIVG-YGNLGRSVEKLIAKQ-PDMDLVGIFSRRA   38 (170)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHTTC-SSEEEEEEEESSS
T ss_pred             cceEEEEC-ChHHHHHHHHHHHhC-CCcEEEEEEeccc
Confidence            35789998 699999999998875 3443333444443

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=89.61  E-value=0.35  Score=32.04  Aligned_cols=33  Identities=21%  Similarity=0.191  Sum_probs=28.8

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .+|-+.| .|-+|..++..|++.|   .+|++.+|++
T Consensus         3 ~nIg~IG-lG~MG~~mA~~L~~~G---~~V~v~dr~~   35 (176)
T d2pgda2           3 ADIALIG-LAVMGQNLILNMNDHG---FVVCAFNRTV   35 (176)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTT---CCEEEECSST
T ss_pred             CcEEEEe-EhHHHHHHHHHHHHCC---CeEEEEcCCH
Confidence            4688888 7999999999999999   4888888876

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=89.48  E-value=0.2  Score=32.49  Aligned_cols=33  Identities=12%  Similarity=0.093  Sum_probs=26.7

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      |+|.|.| .|-+|+.+++.|.+.|   ..|+..++++
T Consensus         1 MkIgiIG-~G~mG~~ia~~l~~~g---~~v~~~~~~~   33 (152)
T d1i36a2           1 LRVGFIG-FGEVAQTLASRLRSRG---VEVVTSLEGR   33 (152)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTT---CEEEECCTTC
T ss_pred             CEEEEEc-HHHHHHHHHHHHHHCC---CeEEEEcCch
Confidence            5688886 7999999999999999   4677666544

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=89.33  E-value=1.9  Score=28.26  Aligned_cols=19  Identities=0%  Similarity=-0.200  Sum_probs=15.1

Q ss_pred             HHHHhcCCcEEEEcCcccC
Q psy17489        124 EQLIKSKVNIIFHCAASLR  142 (177)
Q Consensus       124 ~~~~~~~~d~vi~~aa~~~  142 (177)
                      ..+.++++|+||..|+...
T Consensus        71 ~~~al~gaDvVv~ta~~~~   89 (169)
T d1s6ya1          71 RRRALDGADFVTTQFRVGG   89 (169)
T ss_dssp             HHHHHTTCSEEEECCCTTH
T ss_pred             chhhcCCCCEEEEccccCC
Confidence            3556789999999999754

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=89.22  E-value=0.19  Score=35.34  Aligned_cols=31  Identities=16%  Similarity=0.248  Sum_probs=27.4

Q ss_pred             EEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         39 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        39 vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      |+|+| +|.+|..++..|.++|   .+|.++.+.+
T Consensus         7 vvIIG-aGi~Gls~A~~La~~G---~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIG-GGIIGSAIAYYLAKEN---KNTALFESGT   37 (276)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTT---CCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCC---CcEEEEeCCC
Confidence            88998 7999999999999999   5888888754

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=89.22  E-value=0.3  Score=34.29  Aligned_cols=37  Identities=22%  Similarity=0.174  Sum_probs=32.0

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      ..++|++++|-| .|-+|.++++.|.+.|   .+|++.+.+
T Consensus        35 ~~l~g~~v~IqG-~GnVG~~~a~~L~~~G---akvv~~d~~   71 (230)
T d1leha1          35 DSLEGLAVSVQG-LGNVAKALCKKLNTEG---AKLVVTDVN   71 (230)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSC
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCC---CEEEeeccc
Confidence            457899999998 8999999999999999   688877654

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=89.21  E-value=0.19  Score=30.62  Aligned_cols=39  Identities=13%  Similarity=0.058  Sum_probs=30.0

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~   74 (177)
                      ...+||+|+|.| +|..|.-++..|.+.+   .+++...|++.
T Consensus        28 ~~f~gK~VlVVG-~g~Sa~dia~~l~~~a---k~v~~~~~r~~   66 (107)
T d2gv8a2          28 ELFVGESVLVVG-GASSANDLVRHLTPVA---KHPIYQSLLGG   66 (107)
T ss_dssp             GGGTTCCEEEEC-SSHHHHHHHHHHTTTS---CSSEEEECTTC
T ss_pred             hhcCCCeEEEEC-CCCCHHHHHHHHHHhc---CEEEEEEecCc
Confidence            346899999999 6788999999998775   56666666543

>d1h9aa1 c.2.1.3 (A:1-181,A:413-426) Glucose 6-phosphate dehydrogenase, N-terminal domain {Leuconostoc mesenteroides [TaxId: 1245]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Leuconostoc mesenteroides [TaxId: 1245]

Probab=89.06  E-value=2.2  Score=28.73  Aligned_cols=99  Identities=18%  Similarity=0.145  Sum_probs=52.1

Q ss_pred             ceE-EEecCCcchHHH-H---HHHHHhhC--CCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhccc--ccCcccCCCeEE
Q psy17489         37 GQI-LVTGGTGFMGKL-L---IDKLLRSF--PDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLN--KEVPDFRSKIQV  107 (177)
Q Consensus        37 ~~v-lVtG~~G~iG~~-l---~~~L~~~g--~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~  107 (177)
                      +++ +|.||||.+... |   ...|...|  +.-..|++++|++-..   +.+.+...+...+...  ..+.....++.+
T Consensus         5 ~t~lVIFGaTGDLa~RKL~PAL~~L~~~g~lp~~~~Iig~aR~~~~~---e~f~~~v~~~l~~~~~~~~~~~~~~~~~~y   81 (195)
T d1h9aa1           5 KTLVTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQALND---DEFKQLVRDSIKDFTDDQAQAEAFIEHFSY   81 (195)
T ss_dssp             CEEEEEETTTSHHHHHTHHHHHHHHHHTTSSCSSEEEEEEESSCCCH---HHHHHHHHHHHGGGCSCHHHHHHHHTTEEE
T ss_pred             ceEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCCEEEEEECCcCcH---HHHHHHHHHHHhhccchHhhHHHHhhccce
Confidence            454 478999998843 2   22333344  2235899999976432   3333332222211111  011223567899


Q ss_pred             EeCCCCCCCCCCCHHHHHHHhc--------CCcEEEEcCccc
Q psy17489        108 IPSNLESEHLGLSEDSEQLIKS--------KVNIIFHCAASL  141 (177)
Q Consensus       108 ~~~D~~~~~~~~~~~~~~~~~~--------~~d~vi~~aa~~  141 (177)
                      +.+|+.++.   ..+.+...++        ..+.++++|-+-
T Consensus        82 ~~~~~~~~~---~~~~l~~~l~~~~~~~~~~~~rifYLAvpP  120 (195)
T d1h9aa1          82 RAHDVTDAA---SYAVLKEAIEEAADKFDIDGNRIFYMSVAP  120 (195)
T ss_dssp             EECCTTCTT---THHHHHHHHHHHHHHHTCCSCEEEEECSCG
T ss_pred             eeEeeccHh---hHHHHHHHHHHHHhhcCCCcceEEEEecCH
Confidence            999998873   1122222221        345788888653

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=89.01  E-value=0.29  Score=34.61  Aligned_cols=35  Identities=11%  Similarity=0.093  Sum_probs=30.6

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEE
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV   70 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~   70 (177)
                      ..++|++++|-| .|-+|+++++.|.+.|   .+|+.++
T Consensus        27 ~~l~g~~v~IqG-fGnVG~~~a~~L~~~G---akvv~vs   61 (242)
T d1v9la1          27 GGIEGKTVAIQG-MGNVGRWTAYWLEKMG---AKVIAVS   61 (242)
T ss_dssp             SCCTTCEEEEEC-CSHHHHHHHHHHHTTT---CEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcC---CeEEEee
Confidence            357899999998 9999999999999999   6887665

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=88.97  E-value=0.44  Score=31.97  Aligned_cols=38  Identities=11%  Similarity=0.054  Sum_probs=32.6

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ...+.|+|+|.| +|..|...+..|.++|   ++|.++.+.+
T Consensus        39 ~~~~~k~V~IIG-aGPAGL~AA~~la~~G---~~Vtl~E~~~   76 (179)
T d1ps9a3          39 PAVQKKNLAVVG-AGPAGLAFAINAAARG---HQVTLFDAHS   76 (179)
T ss_dssp             SCSSCCEEEEEC-CSHHHHHHHHHHHTTT---CEEEEEESSS
T ss_pred             CCCCCcEEEEEC-ccHHHHHHHHHHHhhc---cceEEEeccC
Confidence            345678999999 7999999999999999   5899988864

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=88.57  E-value=0.33  Score=33.63  Aligned_cols=35  Identities=17%  Similarity=0.084  Sum_probs=30.1

Q ss_pred             CCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ..++|+|+| .|..|..++..|.+.|   .+|.++.|++
T Consensus         3 ~~~kV~IiG-aG~aGl~~A~~L~~~G---~~v~v~Er~~   37 (265)
T d2voua1           3 TTDRIAVVG-GSISGLTAALMLRDAG---VDVDVYERSP   37 (265)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSSS
T ss_pred             CCCcEEEEC-cCHHHHHHHHHHHHCC---CCEEEEeCCC
Confidence            356899999 7999999999999999   5899998864

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=88.33  E-value=0.31  Score=32.84  Aligned_cols=32  Identities=25%  Similarity=0.205  Sum_probs=25.6

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      |+|.|.| .|++|..++..| +.|   .+|++.+-++
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a~g---~~V~g~Din~   32 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-SLQ---NEVTIVDILP   32 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-TTT---SEEEEECSCH
T ss_pred             CEEEEEC-CChhHHHHHHHH-HCC---CcEEEEECCH
Confidence            5788996 899999998755 568   5899988654

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=87.77  E-value=0.25  Score=34.49  Aligned_cols=32  Identities=19%  Similarity=0.253  Sum_probs=27.4

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      |+|+|+|| |..|...+..|.+.|   .+|.++.++
T Consensus         1 m~V~IIGa-G~aGL~aA~~L~~~G---~~V~vlE~~   32 (347)
T d2ivda1           1 MNVAVVGG-GISGLAVAHHLRSRG---TDAVLLESS   32 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHTTT---CCEEEECSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCC---CCEEEEecC
Confidence            57999994 999999999999999   478888765

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=87.76  E-value=0.37  Score=35.15  Aligned_cols=38  Identities=18%  Similarity=0.165  Sum_probs=30.4

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ...|+|+|+| +|..|...+..|++.|.. ..|+++.|++
T Consensus         2 ~~~KrVaIIG-aG~sGl~~A~~L~~~~~~-~~v~vfEk~~   39 (335)
T d2gv8a1           2 PTIRKIAIIG-AGPSGLVTAKALLAEKAF-DQVTLFERRG   39 (335)
T ss_dssp             CSCCEEEEEC-CSHHHHHHHHHHHTTTCC-SEEEEECSSS
T ss_pred             CCCCeEEEEC-cCHHHHHHHHHHHHhCCC-CCEEEEECCC
Confidence            3568999998 789999999999887632 4888888875

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=87.64  E-value=0.4  Score=34.13  Aligned_cols=35  Identities=14%  Similarity=0.030  Sum_probs=30.5

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEE
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV   70 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~   70 (177)
                      ..+++++++|-| .|-+|.++++.|.+.|   .+|++++
T Consensus        32 ~~l~g~~v~IQG-fGnVG~~~a~~L~e~G---akvvavs   66 (255)
T d1bgva1          32 DTLVGKTVALAG-FGNVAWGAAKKLAELG---AKAVTLS   66 (255)
T ss_dssp             CCSTTCEEEECC-SSHHHHHHHHHHHHHT---CEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcC---CeEEEEe
Confidence            457899999998 8999999999999999   6787665

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=87.42  E-value=0.66  Score=30.40  Aligned_cols=36  Identities=25%  Similarity=0.150  Sum_probs=21.7

Q ss_pred             ceEEEecCCcchHHHHHHH-HHhh--CCCcCeEEEEEeCC
Q psy17489         37 GQILVTGGTGFMGKLLIDK-LLRS--FPDIGAIYIMVRDK   73 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~-L~~~--g~~~~~v~~~~r~~   73 (177)
                      |++.|.||++ +|...+.. ++..  ...+..+..++.++
T Consensus         1 mKIaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~   39 (162)
T d1up7a1           1 MRIAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDE   39 (162)
T ss_dssp             CEEEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCH
T ss_pred             CEEEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCc
Confidence            5789999854 56544433 3322  12346899888765

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=87.30  E-value=0.57  Score=32.26  Aligned_cols=37  Identities=16%  Similarity=0.157  Sum_probs=31.2

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      ....++|+|.| +|..|...+..|.+.|   ..|.++.+++
T Consensus        46 ~~~~k~VvIIG-aGpAGl~aA~~l~~~G---~~v~l~E~~~   82 (233)
T d1djqa3          46 TKNKDSVLIVG-AGPSGSEAARVLMESG---YTVHLTDTAE   82 (233)
T ss_dssp             CSSCCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEECSSS
T ss_pred             ccCCceEEEEc-ccHHHHHHHHHHHHhc---cceeeEeecc
Confidence            34678999999 7999999999999999   4788887654

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=87.18  E-value=0.71  Score=28.21  Aligned_cols=38  Identities=13%  Similarity=0.156  Sum_probs=28.5

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~   74 (177)
                      .++++|.| +|++|..++..|.+.+..-..|..+.|.+.
T Consensus        18 p~~v~IiG-gG~ig~E~A~~l~~~~~~g~~Vtli~~~~~   55 (117)
T d1feca2          18 PKRALCVG-GGYISIEFAGIFNAYKARGGQVDLAYRGDM   55 (117)
T ss_dssp             CSEEEEEC-SSHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred             CCeEEEEC-CChHHHHHHHHhHhhcccccccceeccccc
Confidence            47899998 799999999887665322258888888653

>d1trba2 c.3.1.5 (A:119-244) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=87.00  E-value=1  Score=28.03  Aligned_cols=42  Identities=21%  Similarity=0.216  Sum_probs=33.3

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCC
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSS   77 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~   77 (177)
                      ...++|+|+|.|+ |..+..-+..|.+..   .+|+.+.|++....
T Consensus        23 ~~~~~k~V~VvGg-GdsA~e~A~~L~~~a---~~V~li~r~~~~~~   64 (126)
T d1trba2          23 FFYRNQKVAVIGG-GNTAVEEALYLSNIA---SEVHLIHRRDGFRA   64 (126)
T ss_dssp             GGGTTSEEEEECS-SHHHHHHHHHHTTTS---SEEEEECSSSSCCC
T ss_pred             HHhCCCEEEEECC-CHHHHHHHHHHhhcC---CcEEEEeecccccc
Confidence            4468999999996 778888888888765   79999999876433

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.78  E-value=0.33  Score=32.70  Aligned_cols=31  Identities=19%  Similarity=0.236  Sum_probs=27.5

Q ss_pred             EEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         39 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        39 vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      |+|+| +|..|...+..|.+.|   .+|.++.+++
T Consensus         8 viViG-aG~~Gl~~A~~La~~G---~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVDG---KKVLHIDKQD   38 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTT---CCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCC---CCEEEEcCCC
Confidence            78998 8999999999999999   5888888864

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=85.78  E-value=0.57  Score=31.82  Aligned_cols=34  Identities=12%  Similarity=0.230  Sum_probs=26.5

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcC---eEEEEEe
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIG---AIYIMVR   71 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~---~v~~~~r   71 (177)
                      |+|+|.| +|.+|...+..|.+.|+++.   ++..+++
T Consensus         1 mkV~VIG-aGi~GlstA~~L~~~G~~v~v~e~~~i~~~   37 (246)
T d1kifa1           1 MRVVVIG-AGVIGLSTALCIHERYHSVLQPLDVKVYAD   37 (246)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHHTTTSSSCEEEEEES
T ss_pred             CEEEEEC-chHHHHHHHHHHHHCCCCceEEeeeeeccc
Confidence            5799999 79999999999999997642   4444443

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.63  E-value=1.3  Score=30.53  Aligned_cols=90  Identities=11%  Similarity=0.002  Sum_probs=53.8

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      ..|.+||-.|++.+--.+++.++....   .+|+++++.+.   +.+..++.+.+...+.+      ...++.++.+|..
T Consensus        75 ~~g~~VLdiG~GsGy~ta~la~l~~~~---g~V~~ie~~~~---l~~~a~~~l~~~~~~~~------~~~~~~~~~gD~~  142 (224)
T d1i1na_          75 HEGAKALDVGSGSGILTACFARMVGCT---GKVIGIDHIKE---LVDDSVNNVRKDDPTLL------SSGRVQLVVGDGR  142 (224)
T ss_dssp             CTTCEEEEETCTTSHHHHHHHHHHCTT---CEEEEEESCHH---HHHHHHHHHHHHCTHHH------HTSSEEEEESCGG
T ss_pred             CCCCeEEEecCCCCHHHHHHHHHhCCC---ceEEEEcCCHH---HHHHHHHhccccCcccc------cccceEEEEeecc
Confidence            357799999988776677777776543   58999988642   11222222222111111      1256788888876


Q ss_pred             CCCCCCCHHHHHHHhcCCcEEEEcCcccCch
Q psy17489        114 SEHLGLSEDSEQLIKSKVNIIFHCAASLRFD  144 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~  144 (177)
                      +...         ....+|.|+.+++.....
T Consensus       143 ~~~~---------~~~~fD~I~~~~~~~~ip  164 (224)
T d1i1na_         143 MGYA---------EEAPYDAIHVGAAAPVVP  164 (224)
T ss_dssp             GCCG---------GGCCEEEEEECSBBSSCC
T ss_pred             cccc---------hhhhhhhhhhhcchhhcC
Confidence            5421         123579999888865543

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=85.53  E-value=0.42  Score=34.04  Aligned_cols=33  Identities=24%  Similarity=0.409  Sum_probs=27.5

Q ss_pred             eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .|+|+| +|.+|..++..|.++|+  ..|.+++|+.
T Consensus         3 dViIIG-aGi~G~s~A~~La~~G~--~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIG-AGIVGTNLADELVTRGW--NNITVLDQGP   35 (305)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHTTC--CCEEEECSSC
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCC--CcEEEEeCCC
Confidence            588998 68999999999999984  4688888763

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=85.16  E-value=0.45  Score=34.29  Aligned_cols=33  Identities=12%  Similarity=0.379  Sum_probs=27.8

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .-++|+| +|..|..++..|.+.|   .+|.++.+++
T Consensus         2 ~dv~IIG-aG~sGl~~A~~L~~~g---~~V~iiEk~~   34 (298)
T d1i8ta1           2 YDYIIVG-SGLFGAVCANELKKLN---KKVLVIEKRN   34 (298)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHGGGT---CCEEEECSSS
T ss_pred             ccEEEEC-CcHHHHHHHHHHHhCC---CcEEEEECCC
Confidence            4688998 7999999999999998   5788887654

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=84.99  E-value=3  Score=26.07  Aligned_cols=39  Identities=13%  Similarity=-0.009  Sum_probs=30.3

Q ss_pred             cCCCceEEEecCCcc----------hHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489         33 FYRDGQILVTGGTGF----------MGKLLIDKLLRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~----------iG~~l~~~L~~~g~~~~~v~~~~r~~~   74 (177)
                      ..+.++|+|.|++..          -+.+.++.|.+.|   .+++.+..++.
T Consensus         4 ~~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g---~~~iliN~NP~   52 (127)
T d1a9xa3           4 RTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEG---YRVINVNSNPA   52 (127)
T ss_dssp             CSSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHT---CEEEEECSCTT
T ss_pred             CCCCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcC---CeEEEecCchH
Confidence            345689999998654          7789999999999   47777766653

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=84.94  E-value=0.45  Score=33.45  Aligned_cols=30  Identities=20%  Similarity=0.160  Sum_probs=26.4

Q ss_pred             EEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         39 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        39 vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      |+|.| +|..|..++..|.++|   .+|+++.+.
T Consensus         6 vvIIG-aGi~Gls~A~~La~~G---~~V~viE~~   35 (281)
T d2gf3a1           6 VIVVG-AGSMGMAAGYQLAKQG---VKTLLVDAF   35 (281)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTT---CCEEEECSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCC---CcEEEEeCC
Confidence            78888 7999999999999999   588888775

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=83.46  E-value=0.9  Score=30.68  Aligned_cols=37  Identities=16%  Similarity=0.322  Sum_probs=30.7

Q ss_pred             cCCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         33 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        33 ~~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .++||+|+|.| +|..|..++..+.+.+   ..++.+.|+.
T Consensus        29 ~~~gK~V~VvG-~G~Sa~dia~~~~~~~---~~~~~~~~~~   65 (235)
T d1w4xa2          29 DFSGQRVGVIG-TGSSGIQVSPQIAKQA---AELFVFQRTP   65 (235)
T ss_dssp             CCBTCEEEEEC-CSHHHHHHHHHHHHHB---SEEEEEESSC
T ss_pred             CCCCCEEEEEC-CCccHHHHHHHHHhhh---cccccccccc
Confidence            46899999998 7778999999999987   6777776654

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=82.73  E-value=1.1  Score=29.16  Aligned_cols=36  Identities=28%  Similarity=0.339  Sum_probs=23.7

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEE-eCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV-RDK   73 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~-r~~   73 (177)
                      ..++.|.| +|.+|..+...+++.- ....++++. |+.
T Consensus         4 kirvaIIG-aG~ig~~~~~~~l~~~-~~~el~avas~~~   40 (157)
T d1nvmb1           4 KLKVAIIG-SGNIGTDLMIKVLRNA-KYLEMGAMVGIDA   40 (157)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHHHC-SSEEEEEEECSCT
T ss_pred             CcEEEEEc-CcHHHHHHHHHHHhhC-CcceEEEEEecch
Confidence            35899999 8999987655555542 334666664 443

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.59  E-value=0.99  Score=31.64  Aligned_cols=33  Identities=15%  Similarity=0.272  Sum_probs=27.6

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      ..+|+|+| +|.-|...+..|.+.|   .+|.++-++
T Consensus         5 ~~kViVIG-aG~aGL~aA~~L~~~G---~~V~VlEa~   37 (449)
T d2dw4a2           5 TGKVIIIG-SGVSGLAAARQLQSFG---MDVTLLEAR   37 (449)
T ss_dssp             CCEEEEEC-CBHHHHHHHHHHHHTT---CEEEEECSS
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHhCC---CCEEEEeCC
Confidence            45799999 7999999999999999   578877554

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=82.48  E-value=0.96  Score=29.58  Aligned_cols=32  Identities=16%  Similarity=0.200  Sum_probs=25.5

Q ss_pred             eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEe
Q psy17489         38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   71 (177)
Q Consensus        38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r   71 (177)
                      +|+|.| +|++|..++..|.+.|.++ +++...+
T Consensus         5 ~VvIIG-gG~~G~e~A~~l~~~g~~v-~i~~~~~   36 (183)
T d1d7ya1           5 PVVVLG-AGLASVSFVAELRQAGYQG-LITVVGD   36 (183)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHHTCCS-CEEEEES
T ss_pred             CEEEEC-ccHHHHHHHHHHHhcCCce-EEEEEec
Confidence            588998 8999999999999999765 4544443

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=82.40  E-value=1.4  Score=27.65  Aligned_cols=40  Identities=23%  Similarity=0.309  Sum_probs=30.9

Q ss_pred             cccCCCceEEEecCC---cchHHHHHHHHHhhCCCcCeEEEEEeC
Q psy17489         31 DDFYRDGQILVTGGT---GFMGKLLIDKLLRSFPDIGAIYIMVRD   72 (177)
Q Consensus        31 ~~~~~~~~vlVtG~~---G~iG~~l~~~L~~~g~~~~~v~~~~r~   72 (177)
                      ....+.++|.|.|++   +..|..+.+.|.+.|  ..+|+.+..+
T Consensus         3 ~~lf~PksIAVVGaS~~~~~~g~~v~~~L~~~~--~g~v~pVnP~   45 (129)
T d2csua1           3 DYFFNPKGIAVIGASNDPKKLGYEVFKNLKEYK--KGKVYPVNIK   45 (129)
T ss_dssp             CTTTSCSEEEEETCCSCTTSHHHHHHHHHTTCC--SSEEEEECSS
T ss_pred             hHhCCCCeEEEEccCCCCCCcHHHHHHHHHHcC--CCcEEEeccC
Confidence            345678999999998   789999999987654  2588877554

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.16  E-value=1.1  Score=28.17  Aligned_cols=36  Identities=22%  Similarity=0.234  Sum_probs=27.5

Q ss_pred             CCceEEEecCCcchHHHHHHHHH----hhCCCcCeEEEEEeCCC
Q psy17489         35 RDGQILVTGGTGFMGKLLIDKLL----RSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        35 ~~~~vlVtG~~G~iG~~l~~~L~----~~g~~~~~v~~~~r~~~   74 (177)
                      ..++++|.| +|++|..++..|.    +.|   .+|+.+.+.+.
T Consensus        36 ~~k~i~IvG-gG~~G~E~A~~l~~~~~~~g---~~Vt~i~~~~~   75 (137)
T d1m6ia2          36 EVKSITIIG-GGFLGSELACALGRKARALG---TEVIQLFPEKG   75 (137)
T ss_dssp             HCSEEEEEC-CSHHHHHHHHHHHHHHHHHT---CEEEEECSSSS
T ss_pred             cCCEEEEEC-CCHHHHHHHHHHHHHHHhcC---CEEEEeccccc
Confidence            367899998 6999999988885    356   58888877653

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=81.98  E-value=1.2  Score=28.75  Aligned_cols=35  Identities=20%  Similarity=0.303  Sum_probs=28.4

Q ss_pred             CceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         36 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        36 ~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      +++|+|.| +|.+|.-.+..+.+.|.  ..|+++.|++
T Consensus        45 ~~kVvVIG-GGdtA~D~A~~a~r~GA--~~V~vi~rr~   79 (153)
T d1gtea3          45 RGAVIVLG-AGDTAFDCATSALRCGA--RRVFLVFRKG   79 (153)
T ss_dssp             CSEEEEEC-SSHHHHHHHHHHHHTTC--SEEEEECSSC
T ss_pred             CCEEEEEC-CChhHHHHHHHHHHcCC--cceeEEEeCC
Confidence            56788887 78999999999999873  5788887764

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=81.51  E-value=1.4  Score=30.89  Aligned_cols=35  Identities=17%  Similarity=0.142  Sum_probs=28.0

Q ss_pred             ccCCCceEEEecCCcchHHHHHHHHHh-hCCCcCeEEEEE
Q psy17489         32 DFYRDGQILVTGGTGFMGKLLIDKLLR-SFPDIGAIYIMV   70 (177)
Q Consensus        32 ~~~~~~~vlVtG~~G~iG~~l~~~L~~-~g~~~~~v~~~~   70 (177)
                      ..++|++++|-| .|-+|.++++.|.+ .|   ..|++++
T Consensus        28 ~~l~g~~v~IqG-fGnVG~~~a~~L~~~~G---~kvv~vs   63 (239)
T d1gtma1          28 DTLKGKTIAIQG-YGNAGYYLAKIMSEDFG---MKVVAVS   63 (239)
T ss_dssp             SCSTTCEEEEEC-CSHHHHHHHHHHHHTTC---CEEEEEE
T ss_pred             CCcCCCEEEEEC-CCHHHHHHHHHHHHhcC---cceeecc
Confidence            347899999998 78899999999976 46   5776664

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=81.51  E-value=0.79  Score=32.22  Aligned_cols=32  Identities=28%  Similarity=0.263  Sum_probs=27.3

Q ss_pred             eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      .|+|.| .|..|..++..|.+.|   .+|.++.+++
T Consensus         4 ~V~IvG-aGp~Gl~~A~~L~~~G---~~v~vlE~~~   35 (292)
T d1k0ia1           4 QVAIIG-AGPSGLLLGQLLHKAG---IDNVILERQT   35 (292)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHHT---CCEEEECSSC
T ss_pred             CEEEEC-cCHHHHHHHHHHHHCC---CCEEEEeCCC
Confidence            589999 5699999999999999   5788888764

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=81.50  E-value=5.6  Score=26.76  Aligned_cols=85  Identities=12%  Similarity=0.042  Sum_probs=47.4

Q ss_pred             CCCceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCCCCChHHHHHHHHhhhhhhcccccCcccCCCeEEEeCCCC
Q psy17489         34 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVIFDRLNKEVPDFRSKIQVIPSNLE  113 (177)
Q Consensus        34 ~~~~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  113 (177)
                      ..|.+||-.|++.+--+.++.++...+   ..|++++.++..   .+..++.+...           ...++.++.+|..
T Consensus        74 ~~g~~VLdiG~GtG~~s~~la~~~~~~---g~V~~id~~~~~---~~~a~~~~~~~-----------~~~n~~~~~~d~~  136 (213)
T d1dl5a1          74 DKGMRVLEIGGGTGYNAAVMSRVVGEK---GLVVSVEYSRKI---CEIAKRNVERL-----------GIENVIFVCGDGY  136 (213)
T ss_dssp             CTTCEEEEECCTTSHHHHHHHHHHCTT---CEEEEEESCHHH---HHHHHHHHHHT-----------TCCSEEEEESCGG
T ss_pred             cccceEEEecCccchhHHHHHHHhCCC---CcEEEeecchhh---HHHhhhhHhhh-----------cccccccccCchH
Confidence            457789988866544444444444322   489998876421   12222222210           2357788888876


Q ss_pred             CCCCCCCHHHHHHHhcCCcEEEEcCcccCch
Q psy17489        114 SEHLGLSEDSEQLIKSKVNIIFHCAASLRFD  144 (177)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~d~vi~~aa~~~~~  144 (177)
                      +...         ....+|.|+.+++.....
T Consensus       137 ~~~~---------~~~~fD~I~~~~~~~~~p  158 (213)
T d1dl5a1         137 YGVP---------EFSPYDVIFVTVGVDEVP  158 (213)
T ss_dssp             GCCG---------GGCCEEEEEECSBBSCCC
T ss_pred             Hccc---------cccchhhhhhhccHHHhH
Confidence            5410         113579999888865543

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=81.49  E-value=0.8  Score=30.80  Aligned_cols=33  Identities=18%  Similarity=0.307  Sum_probs=27.1

Q ss_pred             eEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCC
Q psy17489         38 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   73 (177)
Q Consensus        38 ~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~   73 (177)
                      +|+|+| +|..|...+..|.+.|+  .+|.++.+++
T Consensus         2 ~V~IIG-aG~aGL~aA~~L~~~G~--~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVG-AGMSGISAAKRLSEAGI--TDLLILEATD   34 (347)
T ss_dssp             CEEEEC-CBHHHHHHHHHHHHTTC--CCEEEECSSS
T ss_pred             CEEEEC-CcHHHHHHHHHHHhCCC--CcEEEEECCC
Confidence            588898 79999999999999984  3688887654

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=81.21  E-value=1.3  Score=30.42  Aligned_cols=35  Identities=20%  Similarity=0.237  Sum_probs=28.5

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCCCcCeEEEEEeCCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   74 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~~~~~v~~~~r~~~   74 (177)
                      ..|+|+| +|..|..++..|.+.|.  ..|.++.|++.
T Consensus         2 ~~V~IvG-aG~aGl~~A~~L~~~Gi--~~V~V~Er~~~   36 (288)
T d3c96a1           2 IDILIAG-AGIGGLSCALALHQAGI--GKVTLLESSSE   36 (288)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTC--SEEEEEESSSS
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCC--CeEEEEeCCCC
Confidence            5789998 79999999999999983  47777777653

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=80.10  E-value=0.89  Score=30.90  Aligned_cols=24  Identities=29%  Similarity=0.103  Sum_probs=19.5

Q ss_pred             ceEEEecCCcchHHHHHHHHHhhCC
Q psy17489         37 GQILVTGGTGFMGKLLIDKLLRSFP   61 (177)
Q Consensus        37 ~~vlVtG~~G~iG~~l~~~L~~~g~   61 (177)
                      |++++.| ++..|..+++.|.+.|+
T Consensus         1 Mkiv~~~-~~~~g~~~l~~L~~~g~   24 (203)
T d2blna2           1 MKTVVFA-YHDMGCLGIEALLAAGY   24 (203)
T ss_dssp             CEEEEEE-CHHHHHHHHHHHHHTTC
T ss_pred             CeEEEEe-cCHHHHHHHHHHHHCCC
Confidence            5677776 56689999999999985