Psyllid ID: psy17501

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-
Protein Sequence
MKEEVEEVTPLTASTPVTSPIHLSMSVAAFSDIVAGPLASYIALSNKIGGDVATHAKLVSEAFQAQQQFLTVASQSKDPGQSDKMRLLQPTSDKIAAIHIH
Secondary Structure (PSIPRED)
cHHHHHHHccccccccccccccccccHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccHHccccccccccccccccccHHHHHHHHHHcccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
mkeeveevtpltastpvtspihlsMSVAAFSDIVAGPLASYIALSnkiggdvaTHAKLVSEAFQAQQQFLTVasqskdpgqsdkmrllqptsdKIAAIHIH
Flexible Loop (DISEMBL)
mkeeveevtpltastpvtspIHLSMSVAAFSDIVAGPLASYIALSNKIGGDVATHAKLVSEAFQAQQQFLTVasqskdpgqsdkmrllqptsdkiaaihih
Low Complexity Region (SEG)
MKEEVEEVTPLTASTPVTSPIHLSMSVAAFSDIVAGPLASYIALSNKIGGDVATHAKLVSEAFQAQQQFLTVASQSKDPGQSDKMRLLQPTSDKIAAIHIH
Disordered region (IsUnstruct)
*******************PIHLSMSVAAFSDIVAGPLASYIALSNKIGGDVATHAKLVSEAFQAQQQFL*******************************
Disordered Region (DISOPRED)
***EVE*********************AAFSDIVAGPLASYIALSNKIGGDVATHAKLVSEAFQAQQQFLTVA*************LLQPTSDKIAAIHIH
Disordered Region (DISEMBL)
*************STPVTSPIHLSMSVAAFSDIVAGPLASYIALSNKIGGDVATHAKLVSEAFQAQQQFLT***********DKMRLLQPTSDKIAAIHIH
Disordered Region (DISPRO)
*********************HLSMSVAAFSDIVAGPLASYIALSNKIGGDVATHAKLVSEAFQAQQQFLTVASQSKDPGQSDKMRLLQPTSDKIAAIHI*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MKEEVEEVTPLTASTPVTSPIHLSMSVAAFSDIVAGPLASYIALSNKIGGDVATHAKLVSEAFQAQQQFLTVASQSKDPGQSDKMRLLQPTSDKIAAIHIH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	101	2.2.26 [Sep-21-2011]
P40123	477	Adenylyl cyclase-associat	yes	N/A	0.722	0.153	0.438	1e-09
Q5R5X8	477	Adenylyl cyclase-associat	yes	N/A	0.722	0.153	0.438	1e-09
Q01518	475	Adenylyl cyclase-associat	no	N/A	0.712	0.151	0.375	5e-09
Q9CYT6	476	Adenylyl cyclase-associat	yes	N/A	0.732	0.155	0.405	8e-09
P52481	477	Adenylyl cyclase-associat	yes	N/A	0.732	0.155	0.405	8e-09
Q4R4I6	475	Adenylyl cyclase-associat	N/A	N/A	0.712	0.151	0.375	9e-09
Q3SYV4	472	Adenylyl cyclase-associat	no	N/A	0.712	0.152	0.375	2e-08
Q5R8B4	475	Adenylyl cyclase-associat	no	N/A	0.712	0.151	0.361	3e-08
Q08163	474	Adenylyl cyclase-associat	no	N/A	0.712	0.151	0.361	8e-08
P40124	474	Adenylyl cyclase-associat	no	N/A	0.712	0.151	0.361	9e-08

>sp|P40123|CAP2_HUMAN Adenylyl cyclase-associated protein 2 OS=Homo sapiens GN=CAP2 PE=1 SV=1

 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/73 (43%), Positives = 47/73 (64%)

Query: 26  SVAAFSDIVAGPLASYIALSNKIGGDVATHAKLVSEAFQAQQQFLTVASQSKDPGQSDKM 85
           SV AF  ++   +A ++  S  + GDV THA++V  AFQAQ+ FL +ASQ + P ++D  
Sbjct: 45  SVEAFDKLMDSMVAEFLKNSRILAGDVETHAEMVHSAFQAQRAFLLMASQYQQPHENDVA 104

Query: 86  RLLQPTSDKIAAI 98
            LL+P S+KI  I
Sbjct: 105 ALLKPISEKIQEI 117

May have a regulatory bifunctional role.
Homo sapiens (taxid: 9606)

>sp|Q5R5X8|CAP2_PONAB Adenylyl cyclase-associated protein 2 OS=Pongo abelii GN=CAP2 PE=2 SV=1

 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/73 (43%), Positives = 47/73 (64%)

Query: 26  SVAAFSDIVAGPLASYIALSNKIGGDVATHAKLVSEAFQAQQQFLTVASQSKDPGQSDKM 85
           SV AF  ++   +A ++  S  + GDV THA++V  AFQAQ+ FL +ASQ + P ++D  
Sbjct: 45  SVEAFDKLMDSMVAEFLKNSRILAGDVETHAEMVHSAFQAQRAFLLMASQYQQPHENDVA 104

Query: 86  RLLQPTSDKIAAI 98
            LL+P S+KI  I
Sbjct: 105 ALLKPISEKIQEI 117

May have a regulatory bifunctional role.

Pongo abelii (taxid: 9601)

>sp|Q01518|CAP1_HUMAN Adenylyl cyclase-associated protein 1 OS=Homo sapiens GN=CAP1 PE=1 SV=5

 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 44/72 (61%)

Query: 27  VAAFSDIVAGPLASYIALSNKIGGDVATHAKLVSEAFQAQQQFLTVASQSKDPGQSDKMR 86
           V AF  ++AGP+A Y+ +S +IGGDV  HA++V    + ++  L  ASQ + P ++    
Sbjct: 44  VQAFDSLLAGPVAEYLKISKEIGGDVQKHAEMVHTGLKLERALLVTASQCQQPAENKLSD 103

Query: 87  LLQPTSDKIAAI 98
           LL P S++I  +
Sbjct: 104 LLAPISEQIKEV 115

Directly regulates filament dynamics and has been implicated in a number of complex developmental and morphological processes, including mRNA localization and the establishment of cell polarity.

Homo sapiens (taxid: 9606)

>sp|Q9CYT6|CAP2_MOUSE Adenylyl cyclase-associated protein 2 OS=Mus musculus GN=Cap2 PE=1 SV=1

 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 30/74 (40%), Positives = 46/74 (62%)

Query: 26  SVAAFSDIVAGPLASYIALSNKIGGDVATHAKLVSEAFQAQQQFLTVASQSKDPGQSDKM 85
           SV AF  ++   +A ++  S  + GDV THA++V  AFQAQ+ FL + SQ + P +++  
Sbjct: 45  SVEAFDKLINSMVAEFLKNSRVLAGDVETHAEMVHGAFQAQRAFLLMVSQYQQPQENEVA 104

Query: 86  RLLQPTSDKIAAIH 99
            LL+P S+KI  I 
Sbjct: 105 VLLKPISEKIQEIQ 118

May have a regulatory bifunctional role.

Mus musculus (taxid: 10090)

>sp|P52481|CAP2_RAT Adenylyl cyclase-associated protein 2 OS=Rattus norvegicus GN=Cap2 PE=2 SV=1

 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 30/74 (40%), Positives = 46/74 (62%)

Query: 26  SVAAFSDIVAGPLASYIALSNKIGGDVATHAKLVSEAFQAQQQFLTVASQSKDPGQSDKM 85
           SV AF  ++   +A ++  S  + GDV THA++V  AFQAQ+ FL + SQ + P +++  
Sbjct: 46  SVEAFDKLINSMVAEFLKNSRVLAGDVETHAEMVHGAFQAQRAFLLMVSQHQQPQENEVA 105

Query: 86  RLLQPTSDKIAAIH 99
            LL+P S+KI  I 
Sbjct: 106 VLLKPISEKIQEIQ 119

May have a regulatory bifunctional role.

Rattus norvegicus (taxid: 10116)

>sp|Q4R4I6|CAP1_MACFA Adenylyl cyclase-associated protein 1 OS=Macaca fascicularis GN=CAP1 PE=2 SV=3

 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 43/72 (59%)

Query: 27  VAAFSDIVAGPLASYIALSNKIGGDVATHAKLVSEAFQAQQQFLTVASQSKDPGQSDKMR 86
           V AF  ++AGP+A Y+ +S +IGGDV  HA++V    + ++  L  ASQ + P  +    
Sbjct: 44  VQAFDSLLAGPVAEYLKISKEIGGDVQKHAEMVHTGLKLERALLVTASQCQQPADNKLSD 103

Query: 87  LLQPTSDKIAAI 98
           LL P S++I  +
Sbjct: 104 LLAPISEQIKEV 115

Directly regulates filament dynamics and has been implicated in a number of complex developmental and morphological processes, including mRNA localization and the establishment of cell polarity.

Macaca fascicularis (taxid: 9541)

>sp|Q3SYV4|CAP1_BOVIN Adenylyl cyclase-associated protein 1 OS=Bos taurus GN=CAP1 PE=2 SV=3

 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 43/72 (59%)

Query: 27  VAAFSDIVAGPLASYIALSNKIGGDVATHAKLVSEAFQAQQQFLTVASQSKDPGQSDKMR 86
           V AF  ++AGP+A Y+ +S +IGGDV  HA++V    + ++  L  ASQ + P  +    
Sbjct: 44  VQAFDSLLAGPVAEYLKISKEIGGDVQKHAEMVHTGLKLERALLVTASQCQQPAGNKLSD 103

Query: 87  LLQPTSDKIAAI 98
           LL P S++I  +
Sbjct: 104 LLAPISEQIQEV 115

Directly regulates filament dynamics and has been implicated in a number of complex developmental and morphological processes, including mRNA localization and the establishment of cell polarity.

Bos taurus (taxid: 9913)

>sp|Q5R8B4|CAP1_PONAB Adenylyl cyclase-associated protein 1 OS=Pongo abelii GN=CAP1 PE=2 SV=3

 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 42/72 (58%)

Query: 27  VAAFSDIVAGPLASYIALSNKIGGDVATHAKLVSEAFQAQQQFLTVASQSKDPGQSDKMR 86
           V  F  ++AGP+A Y+ +S +IGGDV  HA++V    + ++  L  ASQ + P  +    
Sbjct: 44  VQVFDSLLAGPVAEYLKISKEIGGDVQKHAEMVHTGLKLERALLVTASQCQQPADNKLSD 103

Query: 87  LLQPTSDKIAAI 98
           LL P S++I  +
Sbjct: 104 LLAPISEQIKEV 115

Directly regulates filament dynamics and has been implicated in a number of complex developmental and morphological processes, including mRNA localization and the establishment of cell polarity.

Pongo abelii (taxid: 9601)

>sp|Q08163|CAP1_RAT Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus GN=Cap1 PE=1 SV=3

 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 42/72 (58%)

Query: 27  VAAFSDIVAGPLASYIALSNKIGGDVATHAKLVSEAFQAQQQFLTVASQSKDPGQSDKMR 86
           V AF  ++A P+A Y+ +S +IGGDV  HA++V    + ++  L  ASQ + P  +    
Sbjct: 43  VQAFDSLLANPVAEYLKMSKEIGGDVQKHAEMVHTGLKLERALLVTASQCQQPAGNKLSD 102

Query: 87  LLQPTSDKIAAI 98
           LL P S++I  +
Sbjct: 103 LLAPISEQIQEV 114

Directly regulates filament dynamics and has been implicated in a number of complex developmental and morphological processes, including mRNA localization and the establishment of cell polarity.

Rattus norvegicus (taxid: 10116)

>sp|P40124|CAP1_MOUSE Adenylyl cyclase-associated protein 1 OS=Mus musculus GN=Cap1 PE=1 SV=4

 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 42/72 (58%)

Query: 27  VAAFSDIVAGPLASYIALSNKIGGDVATHAKLVSEAFQAQQQFLTVASQSKDPGQSDKMR 86
           V AF  ++A P+A Y+ +S +IGGDV  HA++V    + ++  L  ASQ + P  +    
Sbjct: 43  VQAFDSLLANPVAEYLKMSKEIGGDVQKHAEMVHTGLKLERALLATASQCQQPAGNKLSD 102

Query: 87  LLQPTSDKIAAI 98
           LL P S++I  +
Sbjct: 103 LLAPISEQIQEV 114

Directly regulates filament dynamics and has been implicated in a number of complex developmental and morphological processes, including mRNA localization and the establishment of cell polarity.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	101
195388527	786	GJ17828 [Drosophila virilis] gi|19414938	0.752	0.096	0.592	1e-17
195118056	821	GI21941 [Drosophila mojavensis] gi|19391	0.742	0.091	0.586	2e-17
198475304	812	GA25429 [Drosophila pseudoobscura pseudo	0.792	0.098	0.575	3e-17
195032216	829	GH10564 [Drosophila grimshawi] gi|193904	0.752	0.091	0.578	7e-17
91094307	416	PREDICTED: similar to GA18629-PA [Tribol	0.742	0.180	0.56	8e-17
194853935	797	GG24610 [Drosophila erecta] gi|190660121	0.752	0.095	0.578	2e-16
158299226	790	AGAP010175-PA [Anopheles gambiae str. PE	0.762	0.097	0.571	3e-16
195470431	795	GE15744 [Drosophila yakuba] gi|194173611	0.752	0.095	0.565	3e-16
357618023	528	putative CAP, adenylate cyclase-associat	0.910	0.174	0.437	4e-16
28317136	528	LD24380p, partial [Drosophila melanogast	0.752	0.143	0.565	4e-16

>gi|195388527|ref|XP_002052931.1| GJ17828 [Drosophila virilis] gi|194149388|gb|EDW65086.1| GJ17828 [Drosophila virilis]

 Score = 94.0 bits (232), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 45/76 (59%), Positives = 58/76 (76%)

Query: 24  SMSVAAFSDIVAGPLASYIALSNKIGGDVATHAKLVSEAFQAQQQFLTVASQSKDPGQSD 83
           SMSVA F DI+AGPL+ Y+ALS KIGGDVA HA+ V  AF AQ +++T+A+Q   P Q+ 
Sbjct: 363 SMSVAGFEDIMAGPLSQYLALSAKIGGDVAQHAQFVKAAFDAQLRYVTLATQIAQPAQAK 422

Query: 84  KMRLLQPTSDKIAAIH 99
           +M LLQPTS +I+AI 
Sbjct: 423 QMELLQPTSTQISAIQ 438

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195118056|ref|XP_002003556.1| GI21941 [Drosophila mojavensis] gi|193914131|gb|EDW12998.1| GI21941 [Drosophila mojavensis]

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 59/75 (78%)

Query: 24  SMSVAAFSDIVAGPLASYIALSNKIGGDVATHAKLVSEAFQAQQQFLTVASQSKDPGQSD 83
           +MSVA + DI+AGPLA Y+ALS +IGGDVA HA++V  AF AQ +++T+A+Q   P QS 
Sbjct: 399 NMSVAGYEDIIAGPLAEYLALSAQIGGDVAAHAQIVKAAFDAQLRYVTLATQMAKPPQSK 458

Query: 84  KMRLLQPTSDKIAAI 98
           +M LLQPTS +I+AI
Sbjct: 459 EMELLQPTSTQISAI 473

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198475304|ref|XP_002132877.1| GA25429 [Drosophila pseudoobscura pseudoobscura] gi|198138761|gb|EDY70279.1| GA25429 [Drosophila pseudoobscura pseudoobscura]

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 46/80 (57%), Positives = 57/80 (71%)

Query: 20  PIHLSMSVAAFSDIVAGPLASYIALSNKIGGDVATHAKLVSEAFQAQQQFLTVASQSKDP 79
           P + SMSVA F DIVAGPL+ Y+ LS KIGGDVA HA LV  AF  QQQ++T+A+Q   P
Sbjct: 386 PPNSSMSVAGFEDIVAGPLSKYLTLSAKIGGDVAQHADLVRSAFGLQQQYVTLATQIAQP 445

Query: 80  GQSDKMRLLQPTSDKIAAIH 99
            Q  +  LL+PTS +I+AI 
Sbjct: 446 AQPKQAELLKPTSTQISAIQ 465

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195032216|ref|XP_001988457.1| GH10564 [Drosophila grimshawi] gi|193904457|gb|EDW03324.1| GH10564 [Drosophila grimshawi]

 Score = 91.3 bits (225), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 44/76 (57%), Positives = 56/76 (73%)

Query: 24  SMSVAAFSDIVAGPLASYIALSNKIGGDVATHAKLVSEAFQAQQQFLTVASQSKDPGQSD 83
           +MSVA F DIVAGPL+ Y+ALS KIGGDVA HA+ V  AF AQ +++ +A+Q   P Q  
Sbjct: 404 NMSVAGFEDIVAGPLSQYLALSAKIGGDVAQHAQFVKAAFDAQLRYVKLATQIAQPAQPK 463

Query: 84  KMRLLQPTSDKIAAIH 99
           +M LLQPTS +I+AI 
Sbjct: 464 QMELLQPTSTQISAIQ 479

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91094307|ref|XP_972149.1| PREDICTED: similar to GA18629-PA [Tribolium castaneum] gi|270014410|gb|EFA10858.1| hypothetical protein TcasGA2_TC001635 [Tribolium castaneum]

 Score = 90.9 bits (224), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 42/75 (56%), Positives = 56/75 (74%)

Query: 25 MSVAAFSDIVAGPLASYIALSNKIGGDVATHAKLVSEAFQAQQQFLTVASQSKDPGQSDK 84
          MSV  FSDI+ GPL  Y+ +S +IGGDV  H++LV  AFQ Q Q+L +ASQSK P Q++ 
Sbjct: 1  MSVQGFSDIIQGPLTQYLQISQQIGGDVGQHSQLVHNAFQMQLQYLVLASQSKQPSQNEI 60

Query: 85 MRLLQPTSDKIAAIH 99
          + LL+PTSD+I+AI 
Sbjct: 61 ISLLKPTSDQISAIQ 75

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194853935|ref|XP_001968254.1| GG24610 [Drosophila erecta] gi|190660121|gb|EDV57313.1| GG24610 [Drosophila erecta]

 Score = 90.1 bits (222), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 44/76 (57%), Positives = 57/76 (75%)

Query: 24  SMSVAAFSDIVAGPLASYIALSNKIGGDVATHAKLVSEAFQAQQQFLTVASQSKDPGQSD 83
           +MSVA F DIVAGPL+ Y+ALS KIGGDVA HA+LV  AF +Q Q++T+A+Q   P Q  
Sbjct: 375 NMSVAGFEDIVAGPLSQYLALSAKIGGDVAQHAELVKSAFGSQLQYVTLATQIAQPAQPK 434

Query: 84  KMRLLQPTSDKIAAIH 99
           +  LL+PTS +I+AI 
Sbjct: 435 QAELLKPTSTQISAIQ 450

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158299226|ref|XP_319349.4| AGAP010175-PA [Anopheles gambiae str. PEST] gi|157014263|gb|EAA43629.4| AGAP010175-PA [Anopheles gambiae str. PEST]

 Score = 89.4 bits (220), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/77 (57%), Positives = 54/77 (70%)

Query: 25  MSVAAFSDIVAGPLASYIALSNKIGGDVATHAKLVSEAFQAQQQFLTVASQSKDPGQSDK 84
           MS+ A+ DI+ G  A++IALSNKIGGDVAT A+ V EAF AQ  FL VAS S  P  +D 
Sbjct: 362 MSINAYEDIMLGSFANFIALSNKIGGDVATQAQFVKEAFDAQFAFLKVASASSAPSNTDL 421

Query: 85  MRLLQPTSDKIAAIHIH 101
             LL+PTSDKI+ I  +
Sbjct: 422 QNLLKPTSDKISTIQSY 438

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195470431|ref|XP_002087510.1| GE15744 [Drosophila yakuba] gi|194173611|gb|EDW87222.1| GE15744 [Drosophila yakuba]

 Score = 89.0 bits (219), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/76 (56%), Positives = 57/76 (75%)

Query: 24  SMSVAAFSDIVAGPLASYIALSNKIGGDVATHAKLVSEAFQAQQQFLTVASQSKDPGQSD 83
           +MSVA F DIVAGPL+ Y++LS KIGGDVA HA+LV  AF +Q Q++T+A+Q   P Q  
Sbjct: 372 NMSVAGFEDIVAGPLSQYLSLSAKIGGDVAQHAELVKSAFGSQLQYVTLATQIAQPAQPK 431

Query: 84  KMRLLQPTSDKIAAIH 99
           +  LL+PTS +I+AI 
Sbjct: 432 QAELLKPTSTQISAIQ 447

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357618023|gb|EHJ71119.1| putative CAP, adenylate cyclase-associated protein 1 isoform 1 [Danaus plexippus]

 Score = 89.0 bits (219), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 42/96 (43%), Positives = 68/96 (70%), Gaps = 4/96 (4%)

Query: 8   VTPLTASTPVTSPIHL----SMSVAAFSDIVAGPLASYIALSNKIGGDVATHAKLVSEAF 63
           +TP ++ TP+T  I L    +MS+  + +++ GPL SY+ LSN++GGD+ATHA LV+EAF
Sbjct: 87  LTPPSSPTPLTVQIDLIETDNMSINGYQELMQGPLQSYLQLSNQLGGDIATHANLVNEAF 146

Query: 64  QAQQQFLTVASQSKDPGQSDKMRLLQPTSDKIAAIH 99
           Q Q +++ +A+    P Q++ ++LL PTS KI++I 
Sbjct: 147 QEQLRYIQLATTRSKPSQAEDVQLLGPTSAKISSIQ 182

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|28317136|gb|AAD27865.2|AF132566_1 LD24380p, partial [Drosophila melanogaster]

 Score = 88.6 bits (218), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/76 (56%), Positives = 56/76 (73%)

Query: 24  SMSVAAFSDIVAGPLASYIALSNKIGGDVATHAKLVSEAFQAQQQFLTVASQSKDPGQSD 83
           +MSVA F DIVAGPL+ Y+ LS KIGGDVA HA+LV  AF +Q Q++T+A+Q   P Q  
Sbjct: 104 NMSVAGFEDIVAGPLSQYLTLSAKIGGDVAQHAELVKSAFGSQLQYVTLATQIAQPAQPK 163

Query: 84  KMRLLQPTSDKIAAIH 99
           +  LL+PTS +I+AI 
Sbjct: 164 QAELLKPTSTQISAIQ 179

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	101
FB|FBgn0261458	783	capt "capulet" [Drosophila mel	0.940	0.121	0.525	9.3e-18
UNIPROTKB|E2RH53	477	CAP2 "Adenylyl cyclase-associa	0.722	0.153	0.438	4.7e-10
UNIPROTKB|B7Z1C4	413	CAP2 "Adenylyl cyclase-associa	0.722	0.176	0.438	5.9e-10
UNIPROTKB|F1N715	486	CAP2 "Adenylyl cyclase-associa	0.722	0.150	0.438	6.2e-10
UNIPROTKB|Q5T0R1	215	CAP1 "Adenylyl cyclase-associa	0.712	0.334	0.375	6.6e-10
UNIPROTKB|Q5T0R2	208	CAP1 "Adenylyl cyclase-associa	0.712	0.346	0.375	6.6e-10
UNIPROTKB|Q5T0R3	203	CAP1 "Adenylyl cyclase-associa	0.712	0.354	0.375	6.6e-10
UNIPROTKB|Q5T0R4	202	CAP1 "Adenylyl cyclase-associa	0.712	0.356	0.375	6.6e-10
UNIPROTKB|Q5T0R5	180	CAP1 "Adenylyl cyclase-associa	0.712	0.4	0.375	6.6e-10
UNIPROTKB|Q5T0R6	176	CAP1 "Adenylyl cyclase-associa	0.712	0.409	0.375	6.6e-10

FB|FBgn0261458 capt "capulet" [Drosophila melanogaster (taxid:7227)]

 Score = 227 (85.0 bits), Expect = 9.3e-18, P = 9.3e-18
 Identities = 52/99 (52%), Positives = 66/99 (66%)

Query:     4 EVEEVTPL--TASTPVT--SPIHLSMSVAAFSDIVAGPLASYIALSNKIGGDVATHAKLV 59
             E EE  P+   A TP    SP   +MSVA F DIVAGPL+ Y+ LS KIGGDVA HA+LV
Sbjct:   335 EEEEALPVFEKAETPPPPPSPPSSNMSVAGFEDIVAGPLSQYLTLSAKIGGDVAQHAELV 394

Query:    60 SEAFQAQQQFLTVASQSKDPGQSDKMRLLQPTSDKIAAI 98
               AF +Q Q++T+A+Q   P Q  +  LL+PTS +I+AI
Sbjct:   395 KSAFGSQLQYVTLATQIAQPAQPKQAELLKPTSTQISAI 433

GO:0008179 "adenylate cyclase binding" evidence=ISS

GO:0008407 "chaeta morphogenesis" evidence=IMP

GO:0048477 "oogenesis" evidence=IMP

GO:0048749 "compound eye development" evidence=IMP

GO:0008154 "actin polymerization or depolymerization" evidence=IMP

GO:0008360 "regulation of cell shape" evidence=IMP

GO:0003779 "actin binding" evidence=IEA;ISS

GO:0008103 "oocyte microtubule cytoskeleton polarization" evidence=IMP

GO:0007015 "actin filament organization" evidence=IMP

GO:0000902 "cell morphogenesis" evidence=IMP

GO:0048190 "wing disc dorsal/ventral pattern formation" evidence=IMP

GO:0005737 "cytoplasm" evidence=IDA

GO:0046716 "muscle cell homeostasis" evidence=IGI

GO:0072499 "photoreceptor cell axon guidance" evidence=IMP

GO:0042052 "rhabdomere development" evidence=IMP

UNIPROTKB|E2RH53 CAP2 "Adenylyl cyclase-associated protein" [Canis lupus familiaris (taxid:9615)]

 Score = 152 (58.6 bits), Expect = 4.7e-10, P = 4.7e-10
 Identities = 32/73 (43%), Positives = 47/73 (64%)

Query:    26 SVAAFSDIVAGPLASYIALSNKIGGDVATHAKLVSEAFQAQQQFLTVASQSKDPGQSDKM 85
             SV AF  ++   +A ++  S  + GDV THA++V  AFQAQ+ FL +ASQ + P ++D  
Sbjct:    45 SVEAFDKLMNSMVAEFLKKSRILAGDVETHAEMVHSAFQAQRAFLLMASQHQQPQENDVA 104

Query:    86 RLLQPTSDKIAAI 98
              LL+P S+KI  I
Sbjct:   105 ALLKPISEKIQEI 117

GO:0007010 "cytoskeleton organization" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0000902 "cell morphogenesis" evidence=IEA

UNIPROTKB|B7Z1C4 CAP2 "Adenylyl cyclase-associated protein" [Homo sapiens (taxid:9606)]

 Score = 150 (57.9 bits), Expect = 5.9e-10, P = 5.9e-10
 Identities = 32/73 (43%), Positives = 47/73 (64%)

Query:    26 SVAAFSDIVAGPLASYIALSNKIGGDVATHAKLVSEAFQAQQQFLTVASQSKDPGQSDKM 85
             SV AF  ++   +A ++  S  + GDV THA++V  AFQAQ+ FL +ASQ + P ++D  
Sbjct:    45 SVEAFDKLMDSMVAEFLKNSRILAGDVETHAEMVHSAFQAQRAFLLMASQYQQPHENDVA 104

Query:    86 RLLQPTSDKIAAI 98
              LL+P S+KI  I
Sbjct:   105 ALLKPISEKIQEI 117

GO:0000902 "cell morphogenesis" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0007010 "cytoskeleton organization" evidence=IEA

UNIPROTKB|F1N715 CAP2 "Adenylyl cyclase-associated protein" [Bos taurus (taxid:9913)]

 Score = 151 (58.2 bits), Expect = 6.2e-10, P = 6.2e-10
 Identities = 32/73 (43%), Positives = 47/73 (64%)

Query:    26 SVAAFSDIVAGPLASYIALSNKIGGDVATHAKLVSEAFQAQQQFLTVASQSKDPGQSDKM 85
             SV AF  ++   +A ++  S  + GDV THA++V  AFQAQ+ FL +ASQ + P ++D  
Sbjct:    45 SVEAFDKLMNSMVAEFLKKSRILAGDVETHAEMVHSAFQAQRAFLLMASQYQQPQENDVA 104

Query:    86 RLLQPTSDKIAAI 98
              LL+P S+KI  I
Sbjct:   105 ALLKPISEKIQEI 117

GO:0007010 "cytoskeleton organization" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0000902 "cell morphogenesis" evidence=IEA

UNIPROTKB|Q5T0R1 CAP1 "Adenylyl cyclase-associated protein 1" [Homo sapiens (taxid:9606)]

 Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
 Identities = 27/72 (37%), Positives = 44/72 (61%)

Query:    27 VAAFSDIVAGPLASYIALSNKIGGDVATHAKLVSEAFQAQQQFLTVASQSKDPGQSDKMR 86
             V AF  ++AGP+A Y+ +S +IGGDV  HA++V    + ++  L  ASQ + P ++    
Sbjct:    44 VQAFDSLLAGPVAEYLKISKEIGGDVQKHAEMVHTGLKLERALLVTASQCQQPAENKLSD 103

Query:    87 LLQPTSDKIAAI 98
             LL P S++I  +
Sbjct:   104 LLAPISEQIKEV 115

GO:0003779 "actin binding" evidence=IEA

GO:0000902 "cell morphogenesis" evidence=IEA

GO:0001667 "ameboidal cell migration" evidence=IEA

GO:0006898 "receptor-mediated endocytosis" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0030864 "cortical actin cytoskeleton" evidence=IEA

UNIPROTKB|Q5T0R2 CAP1 "Adenylyl cyclase-associated protein 1" [Homo sapiens (taxid:9606)]

 Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
 Identities = 27/72 (37%), Positives = 44/72 (61%)

Query:    27 VAAFSDIVAGPLASYIALSNKIGGDVATHAKLVSEAFQAQQQFLTVASQSKDPGQSDKMR 86
             V AF  ++AGP+A Y+ +S +IGGDV  HA++V    + ++  L  ASQ + P ++    
Sbjct:    44 VQAFDSLLAGPVAEYLKISKEIGGDVQKHAEMVHTGLKLERALLVTASQCQQPAENKLSD 103

Query:    87 LLQPTSDKIAAI 98
             LL P S++I  +
Sbjct:   104 LLAPISEQIKEV 115

GO:0003779 "actin binding" evidence=IEA

GO:0000902 "cell morphogenesis" evidence=IEA

GO:0001667 "ameboidal cell migration" evidence=IEA

GO:0006898 "receptor-mediated endocytosis" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0030864 "cortical actin cytoskeleton" evidence=IEA

UNIPROTKB|Q5T0R3 CAP1 "Adenylyl cyclase-associated protein 1" [Homo sapiens (taxid:9606)]

 Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
 Identities = 27/72 (37%), Positives = 44/72 (61%)

Query:    27 VAAFSDIVAGPLASYIALSNKIGGDVATHAKLVSEAFQAQQQFLTVASQSKDPGQSDKMR 86
             V AF  ++AGP+A Y+ +S +IGGDV  HA++V    + ++  L  ASQ + P ++    
Sbjct:    44 VQAFDSLLAGPVAEYLKISKEIGGDVQKHAEMVHTGLKLERALLVTASQCQQPAENKLSD 103

Query:    87 LLQPTSDKIAAI 98
             LL P S++I  +
Sbjct:   104 LLAPISEQIKEV 115

GO:0003779 "actin binding" evidence=IEA

GO:0000902 "cell morphogenesis" evidence=IEA

GO:0001667 "ameboidal cell migration" evidence=IEA

GO:0006898 "receptor-mediated endocytosis" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0030864 "cortical actin cytoskeleton" evidence=IEA

UNIPROTKB|Q5T0R4 CAP1 "Adenylyl cyclase-associated protein 1" [Homo sapiens (taxid:9606)]

 Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
 Identities = 27/72 (37%), Positives = 44/72 (61%)

Query:    27 VAAFSDIVAGPLASYIALSNKIGGDVATHAKLVSEAFQAQQQFLTVASQSKDPGQSDKMR 86
             V AF  ++AGP+A Y+ +S +IGGDV  HA++V    + ++  L  ASQ + P ++    
Sbjct:    44 VQAFDSLLAGPVAEYLKISKEIGGDVQKHAEMVHTGLKLERALLVTASQCQQPAENKLSD 103

Query:    87 LLQPTSDKIAAI 98
             LL P S++I  +
Sbjct:   104 LLAPISEQIKEV 115

GO:0003779 "actin binding" evidence=IEA

GO:0000902 "cell morphogenesis" evidence=IEA

GO:0001667 "ameboidal cell migration" evidence=IEA

GO:0006898 "receptor-mediated endocytosis" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0030864 "cortical actin cytoskeleton" evidence=IEA

UNIPROTKB|Q5T0R5 CAP1 "Adenylyl cyclase-associated protein 1" [Homo sapiens (taxid:9606)]

 Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
 Identities = 27/72 (37%), Positives = 44/72 (61%)

Query:    27 VAAFSDIVAGPLASYIALSNKIGGDVATHAKLVSEAFQAQQQFLTVASQSKDPGQSDKMR 86
             V AF  ++AGP+A Y+ +S +IGGDV  HA++V    + ++  L  ASQ + P ++    
Sbjct:    44 VQAFDSLLAGPVAEYLKISKEIGGDVQKHAEMVHTGLKLERALLVTASQCQQPAENKLSD 103

Query:    87 LLQPTSDKIAAI 98
             LL P S++I  +
Sbjct:   104 LLAPISEQIKEV 115

GO:0003779 "actin binding" evidence=IEA

GO:0000902 "cell morphogenesis" evidence=IEA

GO:0001667 "ameboidal cell migration" evidence=IEA

GO:0006898 "receptor-mediated endocytosis" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0030864 "cortical actin cytoskeleton" evidence=IEA

UNIPROTKB|Q5T0R6 CAP1 "Adenylyl cyclase-associated protein 1" [Homo sapiens (taxid:9606)]

 Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
 Identities = 27/72 (37%), Positives = 44/72 (61%)

Query:    27 VAAFSDIVAGPLASYIALSNKIGGDVATHAKLVSEAFQAQQQFLTVASQSKDPGQSDKMR 86
             V AF  ++AGP+A Y+ +S +IGGDV  HA++V    + ++  L  ASQ + P ++    
Sbjct:    44 VQAFDSLLAGPVAEYLKISKEIGGDVQKHAEMVHTGLKLERALLVTASQCQQPAENKLSD 103

Query:    87 LLQPTSDKIAAI 98
             LL P S++I  +
Sbjct:   104 LLAPISEQIKEV 115

GO:0003779 "actin binding" evidence=IEA

GO:0000902 "cell morphogenesis" evidence=IEA

GO:0001667 "ameboidal cell migration" evidence=IEA

GO:0006898 "receptor-mediated endocytosis" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0030864 "cortical actin cytoskeleton" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	101
pfam01213	313	pfam01213, CAP_N, Adenylate cyclase associated (CA	2e-16

>gnl|CDD|216368 pfam01213, CAP_N, Adenylate cyclase associated (CAP) N terminal

 Score = 72.2 bits (177), Expect = 2e-16
 Identities = 33/87 (37%), Positives = 53/87 (60%)

Query: 12  TASTPVTSPIHLSMSVAAFSDIVAGPLASYIALSNKIGGDVATHAKLVSEAFQAQQQFLT 71
           T S+P  +      SV AF  ++A  ++ ++ LS KIGG+V   A++V +AFQ ++  L 
Sbjct: 31  TTSSPSAAVAGDPASVTAFDSLIAKNISPFVELSKKIGGEVEDQAEMVHKAFQLERALLR 90

Query: 72  VASQSKDPGQSDKMRLLQPTSDKIAAI 98
           VASQS+ P Q+  + LL+P S+ I  +
Sbjct: 91  VASQSQKPDQNTLLELLKPISENIIEV 117

Length = 313

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	101
PF01213	312	CAP_N: Adenylate cyclase associated (CAP) N termin	99.93
KOG2675|consensus	480		99.86

>PF01213 CAP_N: Adenylate cyclase associated (CAP) N terminal; InterPro: IPR013992 Cyclase-associated proteins (CAPs) are highly conserved actin-binding proteins present in a wide range of organisms including yeast, fly, plants, and mammals

Probab=99.93  E-value=1e-25  Score=177.33  Aligned_cols=86  Identities=47%  Similarity=0.735  Sum_probs=71.8

Q ss_pred             CCCCCCcccchhHHHHHHHhhchhHHHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHhhHHHHH
Q psy17501         15 TPVTSPIHLSMSVAAFSDIVAGPLASYIALSNKIGGDVATHAKLVSEAFQAQQQFLTVASQSKDPGQSDKMRLLQPTSDK   94 (101)
Q Consensus        15 ~p~~~~~~~p~sV~afDeli~~~l~~fv~lS~~IGg~V~e~a~lv~~aF~~qR~fL~~As~~kKP~~~~~~~lLkPls~~   94 (101)
                      +++...++.|++|++||++|+++|++|+++|++|||+|++|+++|++||++||+||++|++||||++.+|+++|+||+++
T Consensus        34 ~~~~~~~~~p~sV~afD~~i~~~l~~f~~~S~~igg~V~~~a~~v~~aF~~qr~~L~~as~~kKP~~~~~~~lL~Pl~~~  113 (312)
T PF01213_consen   34 APSAAVASVPPSVEAFDELINGPLKPFVELSKKIGGDVAEQAQLVKKAFQAQRKFLLVASKCKKPDQSELQELLKPLSEA  113 (312)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHBE---HHHHHHHCHHHHHH
T ss_pred             CCcccccCCCchHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCChhhHHHHHHHHHHH
Confidence            34444568999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhh
Q psy17501         95 IAAIHI  100 (101)
Q Consensus        95 I~~i~~  100 (101)
                      |++|++
T Consensus       114 i~~i~~  119 (312)
T PF01213_consen  114 IQKIQE  119 (312)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999975

CAPs are multifunctional proteins that contain several structural domains. CAP is involved in species-specific signalling pathways [, , , ]. In Drosophila, CAP functions in Hedgehog-mediated eye development and in establishing oocyte polarity. In Dictyostelium (slim mold), CAP is involved in microfilament reorganisation near the plasma membrane in a PIP2-regulated manner and is required to perpetuate the cAMP relay signal to organise fruitbody formation. In plants, CAP is involved in plant signalling pathways required for co-ordinated organ expansion. In yeast, CAP is involved in adenylate cyclase activation, as well as in vesicle trafficking and endocytosis. In both yeast and mammals, CAPs appear to be involved in recycling G-actin monomers from ADF/cofilins for subsequent rounds of filament assembly [, ]. In mammals, there are two different CAPs (CAP1 and CAP2) that share 64% amino acid identity. All CAPs appear to contain a C-terminal actin-binding domain that regulates actin remodelling in response to cellular signals and is required for normal cellular morphology, cell division, growth and locomotion in eukaryotes. CAP directly regulates actin filament dynamics and has been implicated in a number of complex developmental and morphological processes, including mRNA localisation and the establishment of cell polarity. Actin exists both as globular (G) (monomeric) actin subunits and assembled into filamentous (F) actin. In cells, actin cycles between these two forms. Proteins that bind F-actin often regulate F-actin assembly and its interaction with other proteins, while proteins that interact with G-actin often control the availability of unpolymerised actin. CAPs bind G-actin. In addition to actin-binding, CAPs can have additional roles, and may act as bifunctional proteins. In Saccharomyces cerevisiae (Baker's yeast), CAP is a component of the adenylyl cyclase complex (Cyr1p) that serves as an effector of Ras during normal cell signalling. S. cerevisiae CAP functions to expose adenylate cyclase binding sites to Ras, thereby enabling adenylate cyclase to be activated by Ras regulatory signals. In Schizosaccharomyces pombe (Fission yeast), CAP is also required for adenylate cyclase activity, but not through the Ras pathway. In both organisms, the N-terminal domain is responsible for adenylate cyclase activation, but the S cerevisiae and S. pombe N-termini cannot complement one another. Yeast CAPs are unique among the CAP family of proteins, because they are the only ones to directly interact with and activate adenylate cyclase []. S. cerevisiae CAP has four major domains. In addition to the N-terminal adenylate cyclase-interacting domain, and the C-terminal actin-binding domain, it possesses two other domains: a proline-rich domain that interacts with Src homology 3 (SH3) domains of specific proteins, and a domain that is responsible for CAP oligomerisation to form multimeric complexes (although oligomerisation appears to involve the N- and C-terminal domains as well). The proline-rich domain interacts with profilin, a protein that catalyses nucleotide exchange on G-actin monomers and promotes addition to barbed ends of filamentous F-actin []. Since CAP can bind profilin via a proline-rich domain, and G-actin via a C-terminal domain, it has been suggested that a ternary G-actin/CAP/profilin complex could be formed. This entry represents the N-terminal domain of CAP proteins. This domain has an all-alpha structure consisting of six helices in a bundle with a left-handed twist and an up-and-down topology [].; GO: 0003779 actin binding, 0007010 cytoskeleton organization; PDB: 1TJF_B 1S0P_A.

>KOG2675|consensus

Probab=99.86  E-value=1.1e-21  Score=159.61  Aligned_cols=81  Identities=41%  Similarity=0.665  Sum_probs=78.6

Q ss_pred             CcccchhHHHHHHHhhchhHHHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHhhHHHHHHHHHh
Q psy17501         20 PIHLSMSVAAFSDIVAGPLASYIALSNKIGGDVATHAKLVSEAFQAQQQFLTVASQSKDPGQSDKMRLLQPTSDKIAAIH   99 (101)
Q Consensus        20 ~~~~p~sV~afDeli~~~l~~fv~lS~~IGg~V~e~a~lv~~aF~~qR~fL~~As~~kKP~~~~~~~lLkPls~~I~~i~   99 (101)
                      -+++|++|.+||++|.++|.+|+++|++|||+|.+++++|+.+|..||.||++|++++||+..+|+++|+||++.|.+|+
T Consensus        43 v~~~p~~i~Ayd~~i~~~l~~~~~lS~kIggdv~~~~~~v~~~F~s~R~~L~~A~q~qKPds~elad~LkPI~e~i~eI~  122 (480)
T KOG2675|consen   43 VAAVPPSIRAYDDLISEPLAEYLKLSKKIGGDVADVAEMVKSAFASQRAFLWVASQKQKPDSNELADLLKPINEEIGEIN  122 (480)
T ss_pred             cccCchHHHHHHHHHHhHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHhccCCChHHHHHHhhhHHHhhhHHh
Confidence            36899999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             h
Q psy17501        100 I  100 (101)
Q Consensus       100 ~  100 (101)
                      +
T Consensus       123 ~  123 (480)
T KOG2675|consen  123 N  123 (480)
T ss_pred             h
Confidence            5

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	101
1tjf_A	186	The Crystal Structure Of The N-Terminal Domain Of C		9e-05
1s0p_A	176	Structure Of The N-Terminal Domain Of The Adenylyl		2e-04

>pdb|1TJF|A Chain A, The Crystal Structure Of The N-Terminal Domain Of Cap Indicates Variable Oligomerisation Length = 186

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 41/75 (54%)
Query: 24 SMSVAAFSDIVAGPLASYIALSNKIGGDVATHAKLVSEAFQAQQQFLTVASQSKDPGQSD 83
          S SV  F ++V   +  ++ALS K+  +V    + + +A  A++  +  ASQSK P Q  
Sbjct: 8  SASVKEFQNLVDQHITPFVALSKKLAPEVGNQVEQLVKAIDAEKALINTASQSKKPSQET 67
Query: 84 KMRLLQPTSDKIAAI 98
           + L++P ++  A +
Sbjct: 68 LLELIKPLNNFAAEV 82

>pdb|1S0P|A Chain A, Structure Of The N-Terminal Domain Of The Adenylyl Cyclase- Associated Protein (Cap) From Dictyostelium Discoideum. Length = 176

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 40/73 (54%)
Query: 26 SVAAFSDIVAGPLASYIALSNKIGGDVATHAKLVSEAFQAQQQFLTVASQSKDPGQSDKM 85
          SV  F ++V   +  ++ALS K+  +V    + + +A  A++  +  ASQSK P Q   +
Sbjct: 1  SVKEFQNLVDQHITPFVALSKKLAPEVGNQVEQLVKAIDAEKALINTASQSKKPSQETLL 60
Query: 86 RLLQPTSDKIAAI 98
           L++P ++  A +
Sbjct: 61 ELIKPLNNFAAEV 73

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	101
1s0p_A	176	CAP, adenylyl cyclase-associated protein; alpha he	3e-22

>1s0p_A CAP, adenylyl cyclase-associated protein; alpha helix bundle, membrane protein; 1.40A {Dictyostelium discoideum} SCOP: a.192.1.1 PDB: 1tjf_A Length = 176

 Score = 84.3 bits (208), Expect = 3e-22
 Identities = 21/73 (28%), Positives = 40/73 (54%)

Query: 26 SVAAFSDIVAGPLASYIALSNKIGGDVATHAKLVSEAFQAQQQFLTVASQSKDPGQSDKM 85
          SV  F ++V   +  ++ALS K+  +V    + + +A  A++  +  ASQSK P Q   +
Sbjct: 1  SVKEFQNLVDQHITPFVALSKKLAPEVGNQVEQLVKAIDAEKALINTASQSKKPSQETLL 60

Query: 86 RLLQPTSDKIAAI 98
           L++P ++  A +
Sbjct: 61 ELIKPLNNFAAEV 73

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	101
1s0p_A	176	CAP, adenylyl cyclase-associated protein; alpha he	99.92

>1s0p_A CAP, adenylyl cyclase-associated protein; alpha helix bundle, membrane protein; 1.40A {Dictyostelium discoideum} SCOP: a.192.1.1 PDB: 1tjf_A

Probab=99.92  E-value=3.5e-25  Score=161.54  Aligned_cols=75  Identities=28%  Similarity=0.492  Sum_probs=72.8

Q ss_pred             hHHHHHHHhhchhHHHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHhhHHHHHHHHHhh
Q psy17501         26 SVAAFSDIVAGPLASYIALSNKIGGDVATHAKLVSEAFQAQQQFLTVASQSKDPGQSDKMRLLQPTSDKIAAIHI  100 (101)
Q Consensus        26 sV~afDeli~~~l~~fv~lS~~IGg~V~e~a~lv~~aF~~qR~fL~~As~~kKP~~~~~~~lLkPls~~I~~i~~  100 (101)
                      ||++||++|+++|++|+++|++|||+|++|+++|.+||++||+||++|++||||++++|+++|+||+++|++|++
T Consensus         1 sV~afD~~i~~~l~~~~~~s~~iGg~v~~~a~~v~~aF~~qr~~L~~as~~kKP~~~~~~~lL~pl~~~i~~i~~   75 (176)
T 1s0p_A            1 SVKEFQNLVDQHITPFVALSKKLAPEVGNQVEQLVKAIDAEKALINTASQSKKPSQETLLELIKPLNNFAAEVGK   75 (176)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHTHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHH
Confidence            689999999999999999999999999999999999999999999999999999988899999999999999975

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	101
d1s0pa_	176	a.192.1.1 (A:) N-terminal domain of adenylylcyclas	2e-24

>d1s0pa_ a.192.1.1 (A:) N-terminal domain of adenylylcyclase associated protein, CAP {Dictyostelium discoideum [TaxId: 44689]} Length = 176

class: All alpha proteins
fold: N-terminal domain of adenylylcyclase associated protein, CAP
superfamily: N-terminal domain of adenylylcyclase associated protein, CAP
family: N-terminal domain of adenylylcyclase associated protein, CAP
domain: N-terminal domain of adenylylcyclase associated protein, CAP
species: Dictyostelium discoideum [TaxId: 44689]

 Score = 88.6 bits (220), Expect = 2e-24
 Identities = 21/73 (28%), Positives = 40/73 (54%)

Query: 26 SVAAFSDIVAGPLASYIALSNKIGGDVATHAKLVSEAFQAQQQFLTVASQSKDPGQSDKM 85
          SV  F ++V   +  ++ALS K+  +V    + + +A  A++  +  ASQSK P Q   +
Sbjct: 1  SVKEFQNLVDQHITPFVALSKKLAPEVGNQVEQLVKAIDAEKALINTASQSKKPSQETLL 60

Query: 86 RLLQPTSDKIAAI 98
           L++P ++  A +
Sbjct: 61 ELIKPLNNFAAEV 73

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	101
d1s0pa_	176	N-terminal domain of adenylylcyclase associated pr	99.93
d1h3la_	75	Sigma factor SigR {Streptomyces coelicolor a3(2) [	80.68

>d1s0pa_ a.192.1.1 (A:) N-terminal domain of adenylylcyclase associated protein, CAP {Dictyostelium discoideum [TaxId: 44689]}

class: All alpha proteins
fold: N-terminal domain of adenylylcyclase associated protein, CAP
superfamily: N-terminal domain of adenylylcyclase associated protein, CAP
family: N-terminal domain of adenylylcyclase associated protein, CAP
domain: N-terminal domain of adenylylcyclase associated protein, CAP
species: Dictyostelium discoideum [TaxId: 44689]

Probab=99.93  E-value=4.6e-26  Score=164.50  Aligned_cols=75  Identities=28%  Similarity=0.492  Sum_probs=73.5

Q ss_pred             hHHHHHHHhhchhHHHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHhhHHHHHHHHHhh
Q psy17501         26 SVAAFSDIVAGPLASYIALSNKIGGDVATHAKLVSEAFQAQQQFLTVASQSKDPGQSDKMRLLQPTSDKIAAIHI  100 (101)
Q Consensus        26 sV~afDeli~~~l~~fv~lS~~IGg~V~e~a~lv~~aF~~qR~fL~~As~~kKP~~~~~~~lLkPls~~I~~i~~  100 (101)
                      ||++||++|+++|++|+++|++|||+|++|+++|.+||++||.||++|++|+||++.+++++|+||+++|++|++
T Consensus         1 SV~afD~~i~~~v~~~~~~s~~Igg~V~~~a~~v~~aF~~qr~~L~~a~~~kKP~~~~~~~ll~pl~~~i~~i~~   75 (176)
T d1s0pa_           1 SVKEFQNLVDQHITPFVALSKKLAPEVGNQVEQLVKAIDAEKALINTASQSKKPSQETLLELIKPLNNFAAEVGK   75 (176)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHTHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHH
Confidence            799999999999999999999999999999999999999999999999999999999999999999999999975

>d1h3la_ a.177.1.1 (A:) Sigma factor SigR {Streptomyces coelicolor a3(2) [TaxId: 100226]}

class: All alpha proteins
fold: Sigma2 domain of RNA polymerase sigma factors
superfamily: Sigma2 domain of RNA polymerase sigma factors
family: Sigma2 domain of RNA polymerase sigma factors
domain: Sigma factor SigR
species: Streptomyces coelicolor a3(2) [TaxId: 100226]

Probab=80.68  E-value=1.6  Score=24.35  Aligned_cols=39  Identities=18%  Similarity=0.184  Sum_probs=35.7

Q ss_pred             hHHHHHHHhhchhHHHHHHHhhHhhHHHHHHHHHHHHHH
Q psy17501         26 SVAAFSDIVAGPLASYIALSNKIGGDVATHAKLVSEAFQ   64 (101)
Q Consensus        26 sV~afDeli~~~l~~fv~lS~~IGg~V~e~a~lv~~aF~   64 (101)
                      .-..|++++..+...+...+..+.++-.+.-++++++|-
T Consensus         5 ~~~~f~~~~~~y~~~l~~~~~~~~~d~~~aeDivQd~f~   43 (75)
T d1h3la_           5 RSARFERDALEFLDQMYSAALRMTRNPADAEDLVQETYA   43 (75)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence            346799999999999999999999999999999999986