Psyllid ID: psy17610

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-----
Protein Sequence
MKTTPNDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMGCYGKLIKKKVSTKLKDVNAEDVSLYSAGVTALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLYIA
Secondary Structure (PSIPRED)
cEEcccccEEEEEcccccEEEEEccccccEEEEccccccEEEEEEcccccEEEEEccccccccEEEEEEccccEEEcccccccEEEEEEcccccEEEEEEccccEEEEEcccccEEEEccccccccEEEEEEcccccEEEEEcccccEEEEEcccccccEEEEcccccEEEEEEcccccEEEEEcccccEEEEcccccEEEEEccccccccEEEEEEcccccEEEEEEccccEEEEEcccccEEEEcccccccccEEEEEEcccccEEEEEEccccEEEEEcccccEEEEEcccccEEEEEEcccccEEEEEcccccEEEEEcccccEEEEccccccccEEEEEEcccccEEEEEEccccEEEEEccccEEEEEEccccccEEEEEEcccccEEEEEEccccEEEEccccccccccccccEEEEEccccccEEEEEEEcccccEEEEEEcccccEEEEEEccccEEEEEcccccEEEEccccccccEEEEEEcccccEEEEEEccccEEEEEccc
Secondary Structure Prediction (SSPRO)
ccccccccEEEEEccccEEEEEEcccccEEEEEccccccEEEEEEccccccccEEEEEcccccEEEEEccccEEEEEccccccEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEcccccccEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEEcccccEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEcccccccEEEEEEcccccEEEEEccccEEEEEEcccccccEEEEEccccccEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEcccccEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEcccccccEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEEcccccEEEEEEcccccEEEEEccccEEEEEEcccccEEEEccccccEEEEEcccccEEEEEccccccEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEcccccccEEEEEEcccccEEEEEccccEEEEEEccc
Coil and Loop (DISEMBL)
mkttpndefaycgttsgdilklnlnypsdlskveSDTAAVLMGCYGKLIKKKVSTklkdvnaedvslySAGVTALYLlkddsgisslqynpvnnkvfvGTVNCEIFLIDMNSGFTLTLVNTChtsaiydlqfpvnfSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYdgkailsgwndgfircftpqsgklkfiipnahnrgvtalaITQDgtrllsgggegqVRIWKLTRESQSLQCVLKEHTSSVSVIQIksdskeamsastdGTCVLWDLIKSTRLIIMILPSMimsaayhpsevqLITCSTNKMIDYWETCdgsiirslegsdvaavncvdfvddgkyfltggADQIVKMWMYREGVPCFVGIGHAASItkikispdkkVIVSVSAdggiflwtfpeleddvgdsrslsskisrsTARSTRLIIMILPSmimsaayhpsevqLITCSTNKMIDYWETCdgsiirslegsdvaavncvdfvddgkyfltggaDQIVKICLYIA
Flexible Loop (DISEMBL)
mkttpndefaycgttsgdilKLNLNYPSDLSKVESDTAAVLMGCYGKLIKKKVSTKLKDVNAEDVSLYSAGVTALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQcvlkehtssvsviqiksdskeamsastDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASItkikispdKKVIVSVSADGGIFLWtfpeleddvgdsrslsskisrstarstRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYfltggadqIVKICLYIA
Low Complexity Region (SEG)
MKTTPNDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMGCYGklikkkvstklkDVNAEDVSLYSAGVTALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRliimilpsmimsAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDsrslsskisrstarstrliimilpsmimsAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLYIA
Disordered region (IsUnstruct)
********FAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMGCYGKLIKKKVSTKLKDVNAEDVSLYSAGVTALYLL*************VNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVI**************DGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPEL*********************TRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLYI*
Disordered Region (DISOPRED)
MKTTPNDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMGCYGKLIKKKVSTKLKDVNAEDVSLYSAGVTALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLYIA
Disordered Region (DISEMBL)
MKTTPNDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMGCYGKLIKKKVSTKLKDVNAEDVSLYSAGVTALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIK***********DGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELED****************ARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLYIA
Disordered Region (DISPRO)
*KTTPNDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMGCYGKLIKKKVSTKLKDVNAEDVSLYSAGVTALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLYIA
Transmembrane Helix (TMHMM)
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Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
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Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKTTPNDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMGCYGKLIKKKVSTKLKDVNAEDVSLYSAGVTALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLYIA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	515	2.2.26 [Sep-21-2011]
Q8N1V2	620	WD repeat-containing prot	no	N/A	0.780	0.648	0.423	3e-92
Q5F201	620	WD repeat-containing prot	yes	N/A	0.755	0.627	0.419	5e-92
Q95JL5	571	WD repeat-containing prot	N/A	N/A	0.660	0.595	0.352	2e-68
Q8YV57	1683	Uncharacterized WD repeat	yes	N/A	0.821	0.251	0.243	2e-28
Q00808	1356	Vegetative incompatibilit	no	N/A	0.782	0.297	0.232	4e-25
Q8YRI1	1526	Uncharacterized WD repeat	no	N/A	0.796	0.268	0.239	4e-25
Q8YTC2	1258	Uncharacterized WD repeat	no	N/A	0.850	0.348	0.236	2e-21
P49695	742	Probable serine/threonine	no	N/A	0.493	0.342	0.246	5e-20
Q9UUG8	598	Transcriptional repressor	yes	N/A	0.479	0.413	0.285	8e-20
Q7ZVF0	416	POC1 centriolar protein h	no	N/A	0.539	0.668	0.236	3e-18

>sp|Q8N1V2|WDR16_HUMAN WD repeat-containing protein 16 OS=Homo sapiens GN=WDR16 PE=1 SV=3

 Score =  339 bits (870), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 171/404 (42%), Positives = 248/404 (61%), Gaps = 2/404 (0%)

Query: 6   NDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMGCYGKLIKKKVSTKLKDVNAEDV 65
           +D F Y GTT+GDILK+N      L+ V        +G       K     +       V
Sbjct: 216 DDSFFYLGTTTGDILKMNPRTKL-LTDVGPAKDKFSLGVSAIRCLKMGGLLVGSGAGLLV 274

Query: 66  SLYSAGVTALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTS 125
              S G   +  ++   GI+S+      ++  VGT    I+ +     F  TL+ TCH  
Sbjct: 275 FCKSPGYKPIKKIQLQGGITSITLRGEGHQFLVGTEESHIYRVSFTD-FKETLIATCHFD 333

Query: 126 AIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGW 185
           A+ D+ FP   + +FATC+K DIR+W   +  ELLRI+V NM C  I F  DGK+I+S W
Sbjct: 334 AVEDIVFPFGTAELFATCAKKDIRVWHTSSNRELLRITVPNMTCHGIDFMRDGKSIISAW 393

Query: 186 NDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSL 245
           NDG IR F P++G+L ++I NAH  GVTA+A T D  R++SGGGEG+VR+W++  ++Q L
Sbjct: 394 NDGKIRAFAPETGRLMYVINNAHRIGVTAIATTSDCKRVISGGGEGEVRVWQIGCQTQKL 453

Query: 246 QCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPS 305
           +  LKEH SSVS I++K +++E ++ASTDGTC++WDL++  R  +++  ++     YHP 
Sbjct: 454 EEALKEHKSSVSCIRVKRNNEECVTASTDGTCIIWDLVRLRRNQMILANTLFQCVCYHPE 513

Query: 306 EVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWM 365
           E Q+IT  T++ I YWE  DG++IR LEGS   ++N +D   +G +F+TGG D +VK+W 
Sbjct: 514 EFQIITSGTDRKIAYWEVFDGTVIRELEGSLSGSINGMDITQEGVHFVTGGNDHLVKVWD 573

Query: 366 YREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFP 409
           Y EG    VG+GH+ +IT+I+ISP  + IVSVSADG I  W +P
Sbjct: 574 YNEGEVTHVGVGHSGNITRIRISPGNQYIVSVSADGAILRWKYP 617

May play an essential role in the growth or survival of hepatocellular carcinoma (HCC).
Homo sapiens (taxid: 9606)

>sp|Q5F201|WDR16_MOUSE WD repeat-containing protein 16 OS=Mus musculus GN=Wdr16 PE=2 SV=1

 Score =  338 bits (868), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 175/417 (41%), Positives = 253/417 (60%), Gaps = 28/417 (6%)

Query: 6   NDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMGCYGKLIKKKVSTKLKDVNAEDV 65
           +D F Y GTT+GDILK+N       +K+ +DT  V         K K S  +  +    +
Sbjct: 216 DDSFFYLGTTTGDILKMNPK-----TKLLADTGPV---------KDKFSLGVSALRCLKM 261

Query: 66  S--LYSAGVTALYLLKDDS-----------GISSLQYNPVNNKVFVGTVNCEIFLIDMNS 112
              L  +G   L   K  S           GI+S+      ++ FVGT    I+ ++   
Sbjct: 262 GGLLVGSGAGLLIFCKSPSYKPIKKVQLQGGITSITLRGEGHQFFVGTEESHIYRVNFTD 321

Query: 113 GFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACI 172
            F  TL+ TCH  A+ D+ FP   + +FATC+K DIR+W   +  ELLRI+V NM C  I
Sbjct: 322 -FKETLIATCHFEAVQDIVFPFGTAELFATCAKKDIRVWHTMSKRELLRITVPNMTCHGI 380

Query: 173 VFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQ 232
            F  DGK+I+S W+DG IR F P+SG+L + I +AH  GVTA+A T D  R++SGGGEG+
Sbjct: 381 DFMRDGKSIISAWDDGKIRAFAPESGRLMYTINSAHRIGVTAIATTSDCKRIISGGGEGE 440

Query: 233 VRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMI 292
           VR+W++  ++Q L+  LKEH SSVS I++K +++E ++ASTDGTC++WDL++  R  +++
Sbjct: 441 VRVWQVGCQTQKLEEALKEHKSSVSCIRVKKNNEECVTASTDGTCIIWDLVRLRRNQMIL 500

Query: 293 LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYF 352
             ++     YHP E Q+IT  T++ I YWE  DGS+IR LEGS   ++N +D   +G +F
Sbjct: 501 ANTLFQCVCYHPEEFQIITSGTDRKIAYWEVFDGSVIRELEGSLSGSINGMDITQEGGHF 560

Query: 353 LTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFP 409
           +TGG D +VK+W Y EG    VG+GH+ +I  ++ISP  + IVSVSADG I  W +P
Sbjct: 561 VTGGHDHLVKVWDYNEGEVTHVGVGHSGNIMAMRISPGNQYIVSVSADGAILRWKYP 617

May play an essential role in the growth or survival of hepatocellular carcinoma (HCC).

Mus musculus (taxid: 10090)

>sp|Q95JL5|WDR16_MACFA WD repeat-containing protein 16 OS=Macaca fascicularis GN=WDR16 PE=2 SV=1

 Score =  259 bits (663), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 147/417 (35%), Positives = 218/417 (52%), Gaps = 77/417 (18%)

Query: 6   NDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMGCYGKLIKKKVSTKLKDVNAEDV 65
           +D F Y GTT+GDILK+N       +K+ +D             K K S  +  +    +
Sbjct: 216 DDSFFYLGTTTGDILKMNPR-----TKLLTDAGPA---------KDKFSLGVSAIRCLKM 261

Query: 66  S--LYSAGVTALYLLKDDS-----------GISSLQYNPVNNKVFVGTVNCEIFLIDMNS 112
              L  +G   L   K  S           GI+S+      ++ FVGT    I+ +    
Sbjct: 262 GGLLVGSGAGLLVFCKSPSYKPIKKIQSQGGITSITLRGEGHQFFVGTEESHIYRVSFTD 321

Query: 113 GFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACI 172
            F  TL+ TCH  A+ D+ FP   + +FATC+K DIR+W   +                 
Sbjct: 322 -FKETLIATCHFEAVEDIVFPFGTAELFATCAKKDIRVWHTSS----------------- 363

Query: 173 VFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQ 232
                                            +AH  GVTA+A T D  R++SGGGEG+
Sbjct: 364 --------------------------------NSAHRIGVTAIATTSDCKRVISGGGEGE 391

Query: 233 VRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMI 292
           VR+W++  ++Q L+  LKEH SSVS I++K +++E ++ASTDGTC++WDL++  R  +++
Sbjct: 392 VRVWQIGCQTQKLEEALKEHKSSVSCIRVKKNNEECVTASTDGTCIIWDLVRLRRNQMIL 451

Query: 293 LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYF 352
             ++     YHP E Q+IT  T++ I YWE  DG++IR LEGS   ++N +D   +G +F
Sbjct: 452 ANTLFQCVCYHPEEFQIITSGTDRKIAYWEVFDGTVIRELEGSLSGSINGMDITQEGVHF 511

Query: 353 LTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFP 409
           +TGG D +VK+W Y EG    VG+GH+ +IT+I+ISP  + IVSVSADG I  W +P
Sbjct: 512 VTGGNDHLVKVWDYNEGEVTHVGVGHSGNITRIRISPGNQYIVSVSADGAILRWKYP 568

Macaca fascicularis (taxid: 9541)

>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1

 Score =  127 bits (319), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 120/493 (24%), Positives = 205/493 (41%), Gaps = 70/493 (14%)

Query: 81   DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVF 140
            +  + S+ ++P    +  G  +  I L   + G  L  + T H   + ++ F  +  ++ 
Sbjct: 1113 EDAVYSVSFSPDGQTIASGGSDKTIKLWQTSDGTLLKTI-TGHEQTVNNVYFSPDGKNLA 1171

Query: 141  ATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKL 200
            +  S + I++W   +   L+ ++  +     + F+ DG+ I +G  D  ++ +  Q GKL
Sbjct: 1172 SASSDHSIKLWDTTSGQLLMTLTGHSAGVITVRFSPDGQTIAAGSEDKTVKLWHRQDGKL 1231

Query: 201  KFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQ 260
               + N H   V +L+ + DG  L S   +  +++W++      L   LK H  SV  + 
Sbjct: 1232 LKTL-NGHQDWVNSLSFSPDGKTLASASADKTIKLWRIA--DGKLVKTLKGHNDSVWDVN 1288

Query: 261  IKSDSKEAMSASTDGTCVLWD--------------------------LIKSTRL------ 288
              SD K   SAS D T  LW+                          +I S  L      
Sbjct: 1289 FSSDGKAIASASRDNTIKLWNRHGIELETFTGHSGGVYAVNFLPDSNIIASASLDNTIRL 1348

Query: 289  --IIMILPSMIM---SAAYHPSEVQ----LITCSTNKMIDYWETCDGSIIRSLEGSDVAA 339
                +I P  ++   S  Y  S +     + T   +  I  W + DGS++++L G+   A
Sbjct: 1349 WQRPLISPLEVLAGNSGVYAVSFLHDGSIIATAGADGNIQLWHSQDGSLLKTLPGNK--A 1406

Query: 340  VNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSA 399
            +  + F   G    +  AD+ VK+W  R+G      IGH   + K+  SPD K + S S 
Sbjct: 1407 IYGISFTPQGDLIASANADKTVKIWRVRDGKALKTLIGHDNEVNKVNFSPDGKTLASASR 1466

Query: 400  DGGIFLW---------TFPELEDDV-GDSRSLSSKI--SRSTARSTRL-------IIMIL 440
            D  + LW         T     D+V   S S   KI  S S  ++ RL       +I  L
Sbjct: 1467 DNTVKLWNVSDGKFKKTLKGHTDEVFWVSFSPDGKIIASASADKTIRLWDSFSGNLIKSL 1526

Query: 441  PS---MIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGK 497
            P+   ++ S  ++P    L + S +K +  W + DG ++ +  G     V    F  DG+
Sbjct: 1527 PAHNDLVYSVNFNPDGSMLASTSADKTVKLWRSHDGHLLHTFSGHS-NVVYSSSFSPDGR 1585

Query: 498  YFLTGGADQIVKI 510
            Y  +   D+ VKI
Sbjct: 1586 YIASASEDKTVKI 1598

Nostoc sp. (strain PCC 7120 / UTEX 2576) (taxid: 103690)

>sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina GN=HET-E1 PE=4 SV=1

 Score =  116 bits (291), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 100/430 (23%), Positives = 177/430 (41%), Gaps = 27/430 (6%)

Query: 82   SGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFA 141
            S + S+ ++    +V  G+ +  I + D  SG T T     H  +++ + F  +   V +
Sbjct: 842  SSVLSVAFSADGQRVASGSDDKTIKIWDTASG-TGTQTLEGHGGSVWSVAFSPDRERVAS 900

Query: 142  TCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLK 201
                  I+IW   +      +         + F+ DG+ + SG +D  I+ +   SG   
Sbjct: 901  GSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSDDHTIKIWDAASGTCT 960

Query: 202  FIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQI 261
              +   H   V ++A + DG R+ SG G+  ++IW     S +    L+ H  SV  +  
Sbjct: 961  QTL-EGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTA--SGTCTQTLEGHGGSVWSVAF 1017

Query: 262  KSDSKEAMSASTDGTCVLWDLIKST-RLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDY 320
              D +   S S D T  +WD    T    +      + S  + P   ++ + S +  I  
Sbjct: 1018 SPDGQRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDHTIKI 1077

Query: 321  WETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAA 380
            W+   G+  ++LEG    +V  V F  DG+   +G  D  +K+W    G       GH  
Sbjct: 1078 WDAVSGTCTQTLEGHG-DSVWSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGG 1136

Query: 381  SITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMIL 440
             +  +  SPD + + S S DG I +W                     + + +    +   
Sbjct: 1137 WVHSVAFSPDGQRVASGSIDGTIKIWD--------------------AASGTCTQTLEGH 1176

Query: 441  PSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFL 500
               + S A+ P   ++ + S++K I  W+T  G+  ++LEG     V  V F  DG+   
Sbjct: 1177 GGWVQSVAFSPDGQRVASGSSDKTIKIWDTASGTCTQTLEGHG-GWVQSVAFSPDGQRVA 1235

Query: 501  TGGADQIVKI 510
            +G +D  +KI
Sbjct: 1236 SGSSDNTIKI 1245

Responsible for vegetative incompatibility through specific interactions with different alleles of the unlinked gene, het-c.

Podospora anserina (taxid: 5145)

>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1

 Score =  116 bits (291), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 105/438 (23%), Positives = 185/438 (42%), Gaps = 28/438 (6%)

Query: 75   LYLLKDDSG-ISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFP 133
            LY L+  +  + S+ ++P    +  G  +  + L D++SG  L  +   +TS +  L F 
Sbjct: 1067 LYTLQGHTSCVRSVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQG-YTSWVRFLVFS 1125

Query: 134  VNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCF 193
             N  ++    S   +R+W + +   L  +         + F+ DG  + SG  D  +R +
Sbjct: 1126 PNGVTLANGSSDQIVRLWDISSKKCLYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLW 1185

Query: 194  TPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHT 253
               S K  +I+   H   V ++    DG+ L SG  +  VR+W++   S    C  + HT
Sbjct: 1186 DISSSKCLYIL-QGHTSWVNSVVFNPDGSTLASGSSDQTVRLWEIN--SSKCLCTFQGHT 1242

Query: 254  SSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRL-IIMILPSMIMSAAYHPSEVQLITC 312
            S V+ +    D     S S+D T  LWD+  S  L       + + S A++P    L + 
Sbjct: 1243 SWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLASG 1302

Query: 313  STNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPC 372
            S ++ +  WE      + + +G   + V+ V F  DG    +G  DQ V++W    G   
Sbjct: 1303 SGDQTVRLWEISSSKCLHTFQGH-TSWVSSVTFSPDGTMLASGSDDQTVRLWSISSGECL 1361

Query: 373  FVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARS 432
            +  +GH   +  +  SPD  ++ S S D  + LW             S+SS     T + 
Sbjct: 1362 YTFLGHTNWVGSVIFSPDGAILASGSGDQTVRLW-------------SISSGKCLYTLQG 1408

Query: 433  TRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDF 492
                     + + S  + P    L + S ++ +  W    G  + +L G  + +V  V F
Sbjct: 1409 HN-------NWVGSIVFSPDGTLLASGSDDQTVRLWNISSGECLYTLHGH-INSVRSVAF 1460

Query: 493  VDDGKYFLTGGADQIVKI 510
              DG    +G  D+ +K+
Sbjct: 1461 SSDGLILASGSDDETIKL 1478

Nostoc sp. (strain PCC 7120 / UTEX 2576) (taxid: 103690)

>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1

 Score =  103 bits (258), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 113/477 (23%), Positives = 204/477 (42%), Gaps = 39/477 (8%)

Query: 63   EDVSLYSA--GVTALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVN 120
            E+V L+S   GV    L   +  + S+ ++P    +   + +  I L D+  G  L  + 
Sbjct: 706  ENVKLWSVRDGVCIKTLTGHEHEVFSVAFHPDGETLASASGDKTIKLWDIQDGTCLQTL- 764

Query: 121  TCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKA 180
            T HT  +  + F  + +++ ++ + + I++W V     L  +         + F+ DG+ 
Sbjct: 765  TGHTDWVRCVAFSPDGNTLASSAADHTIKLWDVSQGKCLRTLKSHTGWVRSVAFSADGQT 824

Query: 181  ILSGWNDGFIRCFTPQSGK-LKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLT 239
            + SG  D  I+ +   +G+ LK  I   H   V ++A + D   L+SG G+  +++W   
Sbjct: 825  LASGSGDRTIKIWNYHTGECLKTYI--GHTNSVYSIAYSPDSKILVSGSGDRTIKLW--- 879

Query: 240  RESQSLQCV--LKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPS-M 296
             + Q+  C+  L  HT+ V  +    D +     S D +  LW+      L      +  
Sbjct: 880  -DCQTHICIKTLHGHTNEVCSVAFSPDGQTLACVSLDQSVRLWNCRTGQCLKAWYGNTDW 938

Query: 297  IMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGG 356
             +  A+ P    L + S +K +  W+   G  I SLEG     +  + F  D +   +  
Sbjct: 939  ALPVAFSPDRQILASGSNDKTVKLWDWQTGKYISSLEG-HTDFIYGIAFSPDSQTLASAS 997

Query: 357  ADQIVKMWMYREGVPCF-VGIGHAASITKIKISPDKKVIVSVSADGGIFLW--------- 406
             D  V++W    G  CF + + H   +  +   P  K+I + SAD  + LW         
Sbjct: 998  TDSSVRLWNISTG-QCFQILLEHTDWVYAVVFHPQGKIIATGSADCTVKLWNISTGQCLK 1056

Query: 407  TFPELEDDV-GDSRSLSSKI--SRSTARSTRL----------IIMILPSMIMSAAYHPSE 453
            T  E  D + G + S   ++  S S  +S RL          I+    + + SA + P+ 
Sbjct: 1057 TLSEHSDKILGMAWSPDGQLLASASADQSVRLWDCCTGRCVGILRGHSNRVYSAIFSPNG 1116

Query: 454  VQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKI 510
              + TCST++ +  W+   G  +++L G      + + F  DGK   +   DQ V+I
Sbjct: 1117 EIIATCSTDQTVKIWDWQQGKCLKTLTGHTNWVFD-IAFSPDGKILASASHDQTVRI 1172

Nostoc sp. (strain PCC 7120 / UTEX 2576) (taxid: 103690)

>sp|P49695|PKWA_THECU Probable serine/threonine-protein kinase PkwA OS=Thermomonospora curvata GN=pkwA PE=3 SV=1

 Score = 99.4 bits (246), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 111/260 (42%), Gaps = 6/260 (2%)

Query: 148 IRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNA 207
           I +W V + +EL  +         + F+ DG  + SG +D  +R +   + + + +    
Sbjct: 483 IHVWDVASGDELHTLEGHTDWVRAVAFSPDGALLASGSDDATVRLWDVAAAEERAVF-EG 541

Query: 208 HNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKE 267
           H   V  +A + DG+ + SG  +G  R+W +   ++    VLK HT  V  +    D   
Sbjct: 542 HTHYVLDIAFSPDGSMVASGSRDGTARLWNVATGTE--HAVLKGHTDYVYAVAFSPDGSM 599

Query: 268 AMSASTDGTCVLWDLIKSTRLIIMILPSM-IMSAAYHPSEVQLITCSTNKMIDYWETCDG 326
             S S DGT  LWD+       ++  P+  ++S A+ P    L+  S +  +  W+   G
Sbjct: 600 VASGSRDGTIRLWDVATGKERDVLQAPAENVVSLAFSPDGSMLVHGS-DSTVHLWDVASG 658

Query: 327 SIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIK 386
             + + EG     V  V F  DG    +G  D+ +++W            GH   +  + 
Sbjct: 659 EALHTFEGH-TDWVRAVAFSPDGALLASGSDDRTIRLWDVAAQEEHTTLEGHTEPVHSVA 717

Query: 387 ISPDKKVIVSVSADGGIFLW 406
             P+   + S S DG I +W
Sbjct: 718 FHPEGTTLASASEDGTIRIW 737

May play a regulatory role during the complex growth cycle and in secondary metabolite production.

Thermomonospora curvata (taxid: 2020)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9UUG8|TUP12_SCHPO Transcriptional repressor tup12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tup12 PE=1 SV=2

 Score = 99.0 bits (245), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 129/273 (47%), Gaps = 26/273 (9%)

Query: 152 SVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRG 211
           SV+ L+ L   SV   IC  + F+ DGK + +G N   +  F  ++GKL  ++    ++ 
Sbjct: 289 SVQLLHTLEHTSV---IC-YVRFSADGKFLATGCNRAAM-VFNVETGKLITLLQEESSKR 343

Query: 212 -----VTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSK 266
                V ++A + DG  L +G  + Q+RIW + +  + +  +L  H   +  +    D K
Sbjct: 344 EGDLYVRSVAFSPDGKYLATGVEDQQIRIWDIAQ--KRVYRLLTGHEQEIYSLDFSKDGK 401

Query: 267 EAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDG 326
             +S S D T  LWD+    + +I+     + +  + P    +   S +K+I  W T  G
Sbjct: 402 TLVSGSGDRTVCLWDVEAGEQKLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIW-TSSG 460

Query: 327 SIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMW-----------MYREGVPCFVG 375
           +++  L G +  +V  V F  DGKY ++G  D  +K+W           MY+EG  C   
Sbjct: 461 TLVEQLHGHE-ESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQT 519

Query: 376 I-GHAASITKIKISPDKKVIVSVSADGGIFLWT 407
             GH   I  + +SPD K I+S S D  I  W+
Sbjct: 520 FTGHKDFILSVTVSPDGKWIISGSKDRTIQFWS 552

Transcriptional repressor.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q7ZVF0|POC1A_DANRE POC1 centriolar protein homolog A OS=Danio rerio GN=poc1a PE=2 SV=1

 Score = 93.6 bits (231), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/287 (23%), Positives = 125/287 (43%), Gaps = 9/287 (3%)

Query: 123 HTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAIL 182
           H  AI  L F  +   + +      + +W+++  +   R +       C+ F+     + 
Sbjct: 17  HRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSAHLLA 76

Query: 183 SGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRES 242
           S   D  +R + P S K + ++  AH   V ++  + DG  LL+   +  +++W + R  
Sbjct: 77  SSSRDKTVRLWVP-SVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVHR-- 133

Query: 243 QSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMIL--PSMIMS- 299
           Q + C L+EH + V   +   D +  +S S D T  LWD   S+R +I     P    S 
Sbjct: 134 QKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWD--ASSRQLIHTFCEPGGYSSY 191

Query: 300 AAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQ 359
             +HPS   + T S++  +  W+    ++++  +    AAVN + F   G + LT  +D 
Sbjct: 192 VDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQ-VHSAAVNALSFHPSGNHLLTASSDS 250

Query: 360 IVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLW 406
            +K+    EG   +   GH  S + +  S       S  +D  + +W
Sbjct: 251 TLKILDLLEGRLLYTLHGHQGSASCVSFSRSGDQFASAGSDQQVMVW 297

Danio rerio (taxid: 7955)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	515
328698263	747	PREDICTED: WD repeat-containing protein	0.780	0.538	0.443	1e-113
242014174	775	WD-repeat protein, putative [Pediculus h	0.790	0.525	0.440	1e-108
345482608	783	PREDICTED: WD repeat-containing protein	0.811	0.533	0.420	1e-102
158294992	663	AGAP005915-PA [Anopheles gambiae str. PE	0.780	0.606	0.429	1e-98
326930643	632	PREDICTED: WD repeat-containing protein	0.770	0.628	0.436	4e-97
157120505	760	hypothetical protein AaeL_AAEL009035 [Ae	0.782	0.530	0.419	5e-97
118099576	619	PREDICTED: WD repeat-containing protein	0.763	0.634	0.438	2e-95
340500711	647	WD repeat protein [Ichthyophthirius mult	0.774	0.616	0.420	1e-94
148229872	617	WD repeat domain 16 [Xenopus laevis] gi|	0.778	0.649	0.431	2e-94
163915117	617	WD repeat domain 16 [Xenopus (Silurana)	0.778	0.649	0.426	3e-94

>gi|328698263|ref|XP_001948904.2| PREDICTED: WD repeat-containing protein 16-like [Acyrthosiphon pisum]

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 203/458 (44%), Positives = 288/458 (62%), Gaps = 56/458 (12%)

Query: 7   DEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMGCYGKLIKKKVSTKLKDVNAEDVS 66
           DE+AYCGT++GD+LK+ LN+P+DL+  +  T+  L+GC+ K  K       K      V 
Sbjct: 212 DEYAYCGTSTGDVLKIKLNFPADLAVQKPSTSPTLVGCFAKYPKPG----KKQPPGITVE 267

Query: 67  LYSAGVTALYLLKDD--------SGISSL------------QYNPV-------------- 92
           LYS GVT+L L  +D        +G+  L             Y  V              
Sbjct: 268 LYSRGVTSLRLYGNDGTMIVGSGNGVVELVRQKVQLKQQKKHYKKVETRLAAPTHPLLVT 327

Query: 93  -----------------NNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVN 135
                            N+ V VGT+NCE+F + + + F +T + TCHTSA++DL FP +
Sbjct: 328 VLSANVESTVTSIQLMENHTVLVGTINCELFTVSVAT-FAVTRMFTCHTSAVFDLAFPRD 386

Query: 136 FSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTP 195
           +S VFAT SKND+R+WSV TL ELLR++V N  C+ ++F++DG  I+S WNDG IR FTP
Sbjct: 387 YSKVFATASKNDVRVWSVDTLQELLRVTVPNCSCSGVLFSHDGSQIISSWNDGRIRSFTP 446

Query: 196 QSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSS 255
           +SG+L + I N HN GV+A+AI +DG +L+SGGG+GQVR+W++   + +L  VLKEH  +
Sbjct: 447 ESGRLLYTIHNCHNNGVSAIAICKDGMKLVSGGGDGQVRVWQVNGTNGTLIAVLKEHKGA 506

Query: 256 VSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTN 315
           V+ I +     EA+++S DGTC++WD+++ TRL IM   ++  SA YHP+  QL+T  TN
Sbjct: 507 VTSIDLHRLGHEAITSSADGTCIVWDIVRYTRLTIMFSSTVFTSAMYHPNSAQLLTSGTN 566

Query: 316 KMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVG 375
           + + +WE  DGS+IR +EGS VAA+N +D    GKYF+TG +DQ VK+W+Y EGVP  VG
Sbjct: 567 RYVGFWEALDGSLIREIEGSAVAAINSLDITPTGKYFVTGSSDQTVKVWLYNEGVPTHVG 626

Query: 376 IGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELED 413
           +GHA  +T +++SPD + +VS S DGGIFLW FP   D
Sbjct: 627 VGHAGVVTNVRVSPDGQYLVSTSVDGGIFLWCFPHDPD 664

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242014174|ref|XP_002427770.1| WD-repeat protein, putative [Pediculus humanus corporis] gi|212512224|gb|EEB15032.1| WD-repeat protein, putative [Pediculus humanus corporis]

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 203/461 (44%), Positives = 282/461 (61%), Gaps = 54/461 (11%)

Query: 1   MKTTPNDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMGCYGKLIKKKVSTKLKDV 60
           M+    DEF YCGT++GDI K+ + YP D++++E    A L+GC+GK I K      K  
Sbjct: 207 MEVDKKDEFLYCGTSTGDIAKVFVGYPEDVTQLEPKRPATLIGCFGKYIGKNA----KMP 262

Query: 61  NAEDVSLYSAGVTALYLL---------------------------------KD------- 80
                  YS GV AL LL                                 KD       
Sbjct: 263 TGCTAECYSLGVKALILLGKGEIIVGAGNGLVEHVKERDESHLNDYANLRVKDPSIPMLL 322

Query: 81  -------DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFP 133
                  DSG+SS++    N  + VGT   EIF I+  + + L L  TCHT+A+YD+ FP
Sbjct: 323 SVRHHCVDSGVSSMKL--WNKDLIVGTEQSEIFSINFET-WNLILKCTCHTTAVYDICFP 379

Query: 134 VNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCF 193
            +FS+VFATCSK+ +R+W+  T  E+LRI+V N  C+ + F ++GK I++ WNDG IR F
Sbjct: 380 SDFSAVFATCSKDTVRVWNTETSQEMLRINVPNFTCSGVSFYHNGKGIVTSWNDGTIRSF 439

Query: 194 TPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHT 253
           TPQ+GKL FII NAHN+GV+AL+IT+D  +++SGGGEGQVR+W +  + QSL+ VL+EH 
Sbjct: 440 TPQTGKLMFIIHNAHNKGVSALSITKDALKIVSGGGEGQVRVWDIKPDVQSLRGVLQEHK 499

Query: 254 SSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCS 313
             VS I I + + EA+SASTDG+C++WD+I+  R  I+   ++ M+  YHPS+ Q++T  
Sbjct: 500 GPVSAIHINNANDEAVSASTDGSCIIWDIIRCVRKNIIFANTLFMAVRYHPSDCQILTTG 559

Query: 314 TNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCF 373
           TN+ I YWET DGS+IR  EGS  + +N +D   DG Y +TGG DQ+VK+W Y+EG+   
Sbjct: 560 TNRKIAYWETYDGSLIRDFEGSTASGLNTLDITGDGNYIVTGGNDQMVKLWKYQEGINTH 619

Query: 374 VGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDD 414
           VG+GHA  IT  K SPD   I++VSADGGI+ W  P  + +
Sbjct: 620 VGLGHAGIITAAKFSPDNNYIITVSADGGIYRWQNPYAQKE 660

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345482608|ref|XP_001607842.2| PREDICTED: WD repeat-containing protein 16-like [Nasonia vitripennis]

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 198/471 (42%), Positives = 285/471 (60%), Gaps = 53/471 (11%)

Query: 7   DEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMGCYGKLIKKKVSTKLKDVNAEDVS 66
           DE AYCGT+SGDI+K  LNY  ++  +E     V++GCY K+ K     K + +   D  
Sbjct: 209 DELAYCGTSSGDIIKARLNYYHNMEHMEPVQPPVMVGCYSKISK---DAKNRKIGIGD-- 263

Query: 67  LYSAGVTALYLLKDD-----SGISSLQYNPV----------------------------- 92
           LYS GV+ L + K D     +G  S++   +                             
Sbjct: 264 LYSGGVSNLLIFKQDKIIVGTGDGSIELATIVELNVKQDKKIKSPSTPQIKTLLSGNVRS 323

Query: 93  ---------NNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATC 143
                    N  V VGT   EI+ + + S F + L+ TCHTS IYD+ FP ++S +FAT 
Sbjct: 324 AVTSMILWKNEFVIVGTALSEIYQVKL-SDFDMRLLVTCHTSTIYDVAFPHDYSEIFATG 382

Query: 144 SKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFI 203
           SKNDIR+W + T  ELLRI+V N++C  + F+YDG+ ++S WNDG IR FTPQ+G+L F 
Sbjct: 383 SKNDIRLWRLETQKELLRITVPNIVCTSLYFSYDGRMLVSAWNDGIIRAFTPQTGRLIFA 442

Query: 204 IPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKS 263
           I +AH + V+A+ +T+DG R++SGG +GQVR+W++    Q L C+LKEH  SV+ + I  
Sbjct: 443 ILHAHVKAVSAITLTKDGKRIISGGCDGQVRVWEVLAAVQRLVCILKEHRGSVTSLNINH 502

Query: 264 DSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWET 323
           DS E +S+STDGTC++WD+ +  R  +++  +M M+A + P+ VQ++TC T++ I YWET
Sbjct: 503 DSTEVISSSTDGTCIVWDIDRGVRKQVLMGTTMYMAACFSPNGVQILTCGTDRKITYWET 562

Query: 324 CDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASIT 383
            DGS++R +EGS   A+N ++   DG+YF+TGG D IVK+W Y  G     G+GHAA IT
Sbjct: 563 LDGSMVREVEGSGSGALNSINISPDGQYFVTGGNDSIVKLWSYETGETTHAGMGHAAIIT 622

Query: 384 KIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRS-TARST 433
             KISPD K IV+VS DG I +W  P    ++  +RS   + + S T+RST
Sbjct: 623 ACKISPDGKHIVTVSGDGAIMIWKCPF---EMKSARSTGKRTAASVTSRST 670

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158294992|ref|XP_315945.4| AGAP005915-PA [Anopheles gambiae str. PEST] gi|157015823|gb|EAA11930.4| AGAP005915-PA [Anopheles gambiae str. PEST]

 Score =  367 bits (941), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 195/454 (42%), Positives = 269/454 (59%), Gaps = 52/454 (11%)

Query: 1   MKTTPNDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMGCYGKLIKKKVSTKLKDV 60
           M+ +PND+  Y GT SGDI+K+NLN   + S    D   VL+GC+GK   KK   K    
Sbjct: 209 MRISPNDDTLYVGTMSGDIVKINLNCNPNPSDPSQDKMPVLLGCFGKHNAKKPPGK---- 264

Query: 61  NAEDVSLYSAGVTALYLLKD---------------------------------------- 80
              D   Y  GV  L LL D                                        
Sbjct: 265 ---DCEKYHYGVRDLLLLPDGKLIIGAGDGTIDMVQERNGNFKNYRGPTWPELKSLQSTK 321

Query: 81  -DSGISSLQYNPVNNK-VFVGTVNCEIFLIDM-NSGFTLTLVNTCHTSAIYDLQFPVNFS 137
            D  I+SLQ    N K + +GT  CEI+ +++ N   +L L+ TCHT+A+YD+ FP NFS
Sbjct: 322 IDGVITSLQIR--NGKTLLIGTNGCEIYSLELANFSSSLRLLKTCHTNAVYDIAFPYNFS 379

Query: 138 SVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQS 197
            VFAT S   IRIWS   + ELLRI V N   + IVF+ DGK+I+S WNDG IR FTP S
Sbjct: 380 LVFATASHESIRIWSTSKMQELLRIVVPNFASSSIVFSRDGKSIISAWNDGVIRAFTPLS 439

Query: 198 GKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVS 257
           GKL + IPNAHN+G +++A+T +G  ++SGG EGQVR+WK+    QSL  VLKEH   + 
Sbjct: 440 GKLIYAIPNAHNKGCSSVAVTSNGKIVVSGGIEGQVRVWKIDPYVQSLIGVLKEHYGPIE 499

Query: 258 VIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKM 317
            + I +   E +SAS DG+CV+WDLI+ TR  ++   +  ++A Y P+ VQ++T  ++K+
Sbjct: 500 SVHINNYDTEVVSASRDGSCVIWDLIRLTRKHVIFAHTQFIAAQYFPTGVQILTAGSDKL 559

Query: 318 IDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIG 377
           I YWE  DGS++R +EGS    +N +D    G+YF++ G DQIV++W Y+ GV   VGIG
Sbjct: 560 IGYWEAYDGSLVREVEGSKSGPINAIDMNMMGEYFVSAGTDQIVRLWNYQLGVEVAVGIG 619

Query: 378 HAASITKIKISPDKKVIVSVSADGGIFLWTFPEL 411
           HA++IT  + SP+ K +V+ S+DGGIF+W  PE+
Sbjct: 620 HASAITSARYSPNGKFLVTGSSDGGIFVWKVPEV 653

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|326930643|ref|XP_003211453.1| PREDICTED: WD repeat-containing protein 16-like [Meleagris gallopavo]

 Score =  361 bits (927), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 186/426 (43%), Positives = 263/426 (61%), Gaps = 29/426 (6%)

Query: 1   MKTTPNDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMGCYGKLIKKKVS---TKL 57
           +K   +D + Y GT++GDILK+N             T   LM  +G   +KK S   T L
Sbjct: 215 LKIADDDNYFYVGTSTGDILKVN-------------TRNKLMTDFGP--QKKFSLGVTAL 259

Query: 58  KDVNAEDVSLYSAGVTA----------LYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFL 107
             +   DV + + G T           +  ++   G++SL      ++ FVGT  C+I+ 
Sbjct: 260 LLLKTGDVIVGTGGGTVALCKGSNYKVMKNIQVQGGVTSLTRRGQGHQFFVGTNTCQIYR 319

Query: 108 IDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNM 167
           ++  + F   L+ TCH+ A++D+ FP   S +FATCSK+DIR+W      ELLRI + NM
Sbjct: 320 VNYTA-FKEELITTCHSEAVHDIVFPFGTSDLFATCSKDDIRVWHTPENRELLRIVIPNM 378

Query: 168 ICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSG 227
            C  I F  DGK+I+S WNDG IR F P+SG+ K++I NAH+ GVTA+A T D  R+LSG
Sbjct: 379 TCYAIEFMRDGKSIISAWNDGKIRAFMPESGREKYVINNAHSLGVTAIAATNDCKRILSG 438

Query: 228 GGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTR 287
           GGEGQVR+W +  ++  L+ VLKEH S+VS I++K + KE ++AS DGTC++WD+ + TR
Sbjct: 439 GGEGQVRLWAIGEKTHKLEAVLKEHISAVSCIKLKKNDKECVTASLDGTCIIWDIGRFTR 498

Query: 288 LIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVD 347
             +++  ++     YHP E QLIT  T++ I YWE  DGS IR LEGS   ++N +D   
Sbjct: 499 KQMILANTLFKCVCYHPEEYQLITSGTDRRIGYWEVYDGSAIRDLEGSLSGSINGMDITS 558

Query: 348 DGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWT 407
           DG YF+TGG D +VKMW Y EG    +G+GH+ +IT++KI P KK IVSVSADG I LW 
Sbjct: 559 DGAYFVTGGDDHLVKMWDYNEGTVTHIGVGHSGNITRLKICPGKKYIVSVSADGAILLWK 618

Query: 408 FPELED 413
           +P + +
Sbjct: 619 YPAVPN 624

Source: Meleagris gallopavo

Species: Meleagris gallopavo

Genus: Meleagris

Family: Phasianidae

Order: Galliformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|157120505|ref|XP_001653637.1| hypothetical protein AaeL_AAEL009035 [Aedes aegypti] gi|108874912|gb|EAT39137.1| AAEL009035-PA [Aedes aegypti]

 Score =  361 bits (926), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 189/451 (41%), Positives = 266/451 (58%), Gaps = 48/451 (10%)

Query: 1   MKTTPNDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMGCYGKLIKKKVSTKLKDV 60
           M  T NDE  Y GT SGDI+K+ LN  S+ +    D   V++GC+GK   +K   K    
Sbjct: 209 MCITENDEILYVGTMSGDIVKIRLNVSSNPNAPMPDKTPVMLGCFGKHNPRKPVGK---- 264

Query: 61  NAEDVSLYSAGVTALYLLKDDS-----------------------------GISSLQYNP 91
              D   Y  GV  L +L + S                              + SLQ   
Sbjct: 265 ---DCEKYHYGVRDLLILPNGSLIIGAGDGTIEMVHERNVSFKNYNSPTWPQLKSLQSTK 321

Query: 92  VNNKV-----------FVGTVNCEIFLIDM-NSGFTLTLVNTCHTSAIYDLQFPVNFSSV 139
           V   +            +GT  CEI+ +++ N   +L L+ TCHT+A+YD+ FP NFS V
Sbjct: 322 VGGVITSLQIVNQYTLLIGTDGCEIYSLELQNFKTSLKLLKTCHTNAVYDIAFPYNFSLV 381

Query: 140 FATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGK 199
           FAT S   IRIWS   + ELLRI V N   + IVF+ DGK+I+S WNDG IR FTP +GK
Sbjct: 382 FATSSHESIRIWSTSRMQELLRIVVPNFASSSIVFSRDGKSIISAWNDGVIRAFTPLTGK 441

Query: 200 LKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVI 259
           L + IPNAHN+G +++A+T +G  L+SGG EGQVR+WK+    QS+  VLKEH   +  +
Sbjct: 442 LIYAIPNAHNKGCSSVAVTSNGKILVSGGIEGQVRVWKIEPYMQSMIGVLKEHYGPIESV 501

Query: 260 QIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMID 319
            I S   E +SAS DG+CV+WDLI+ TR  ++   +  ++A Y+P+ VQ++T  ++K+I 
Sbjct: 502 HINSFDTEVVSASRDGSCVIWDLIRLTRKHVIFAHTQFIAAQYYPTGVQILTAGSDKLIG 561

Query: 320 YWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHA 379
           YWE  DGS++R +EGS    +N +D    G+YF++ G DQ+V++W Y+ GV   VGIGHA
Sbjct: 562 YWEAFDGSLVREVEGSKSGPINAIDMNMTGEYFVSAGTDQVVRLWDYQLGVEVAVGIGHA 621

Query: 380 ASITKIKISPDKKVIVSVSADGGIFLWTFPE 410
           ++IT  + SP+ K +V+ S+DGGIF+WT PE
Sbjct: 622 SAITSARYSPNGKFLVTGSSDGGIFVWTVPE 652

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|118099576|ref|XP_415591.2| PREDICTED: WD repeat-containing protein 16 [Gallus gallus]

 Score =  356 bits (913), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 185/422 (43%), Positives = 263/422 (62%), Gaps = 29/422 (6%)

Query: 1   MKTTPNDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMGCYGKLIKKKVS---TKL 57
           ++   +D + Y GT++GD+LK+N             T   LM  +G   +KK S   T L
Sbjct: 211 LQIADDDNYFYVGTSTGDVLKVN-------------TRNKLMTDFGP--QKKFSLGVTAL 255

Query: 58  KDVNAEDVSLYSA-GVTAL------YLLKD---DSGISSLQYNPVNNKVFVGTVNCEIFL 107
             +   DV + +  G  AL       ++K+     G++SL      ++ FVGT  C+I+ 
Sbjct: 256 LLLKTGDVIIGTGEGTVALCKGSNYRVMKNIQVHGGVTSLTRRGQGHQFFVGTKMCQIYR 315

Query: 108 IDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNM 167
           ++  + F   L+ TCH+ A++D+ FP   S +FATCSK+DIR+W      ELLRI + NM
Sbjct: 316 VNYTA-FKEELITTCHSEAVHDIVFPFGTSDLFATCSKDDIRVWHTPEHRELLRIVIPNM 374

Query: 168 ICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSG 227
            C  I F  DGK+I+S WNDG IR F P+SG+  ++I NAH+RGVTA+A T D  R++SG
Sbjct: 375 TCYAIEFMRDGKSIISAWNDGKIRAFMPESGREMYVINNAHSRGVTAIAATSDCKRIVSG 434

Query: 228 GGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTR 287
           GGEGQVR+W +  +++ L+ VLKEH S+VS I+IK + KE ++AS DGTC++WD+ + TR
Sbjct: 435 GGEGQVRVWAIGEKTRKLEGVLKEHISAVSCIKIKKNDKECVTASLDGTCIIWDIGRFTR 494

Query: 288 LIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVD 347
             +++  ++     YHP E QLIT  T++ I YWE  DGS IR LEGS   ++N +D   
Sbjct: 495 KQMILANTLFKCVCYHPEEYQLITSGTDRRIGYWEVYDGSAIRDLEGSLSGSINGMDITS 554

Query: 348 DGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWT 407
           DG YF+TGG D +VKMW Y EG    +G+GH+ +IT++KI P  K IVSVSADG I LW 
Sbjct: 555 DGAYFVTGGDDHLVKMWDYNEGTVTHIGVGHSGNITRLKICPGNKYIVSVSADGAILLWK 614

Query: 408 FP 409
           +P
Sbjct: 615 YP 616

Source: Gallus gallus

Species: Gallus gallus

Genus: Gallus

Family: Phasianidae

Order: Galliformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|340500711|gb|EGR27571.1| WD repeat protein [Ichthyophthirius multifiliis]

 Score =  353 bits (906), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 173/411 (42%), Positives = 254/411 (61%), Gaps = 12/411 (2%)

Query: 5   PNDEFAYCGTTSGDILKLNLNYP--SDLSKVESDTAAVLMGCYGKLIKKKVSTKLKDVNA 62
           P D + YCGT +GD+L++N+       L  ++     + +G  G L    +      V A
Sbjct: 203 PTDSYCYCGTKTGDVLEVNIERAIFKRLGPIKK-LFCLGVGTLGILPNGDII-----VGA 256

Query: 63  EDVSLYSAGVTALYLLKDDS---GISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLV 119
            D +L    + ++ +L        +SS+ +       F GTV   I+ ++     T  L 
Sbjct: 257 GDGTLAKLSIQSMTVLAQSEVLGAVSSITFTGDYTHFFCGTVQSNIYWVNTEK-LTPELR 315

Query: 120 NTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGK 179
           NTCH   + D+ FP N+S VFATCS+ DIRIW+ R   ELLRI V N+ C C+ F  DGK
Sbjct: 316 NTCHYEQVNDIAFPYNYSDVFATCSQTDIRIWNARNRQELLRIQVPNLECNCVSFMQDGK 375

Query: 180 AILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLT 239
           +I+SGWNDG IR F PQSGKL ++I +AH  GVTAL  T D  R++SGG EG+VR+W + 
Sbjct: 376 SIISGWNDGKIRAFLPQSGKLMYVISDAHIHGVTALCPTSDCQRIISGGSEGEVRVWVIG 435

Query: 240 RESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMS 299
           +++Q ++  +KEH   V  IQIK ++++A+SAS DG+C++WDL   TRL+ +   ++   
Sbjct: 436 KQTQVMKASMKEHRGRVWSIQIKKNNEQAVSASADGSCIIWDLKTFTRLMCLFESTLFKQ 495

Query: 300 AAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQ 359
             YHP E QL+T  +++ I YWE  DG  IR L+GSD   VN +    +G++F +GG D+
Sbjct: 496 VLYHPEESQLLTTGSDRKISYWEIFDGQAIRMLDGSDEGEVNALSITKEGEHFASGGEDK 555

Query: 360 IVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPE 410
           IVK+W Y EG+  ++GIGH+ +IT+++ISPD+K +VSV A+G IF+W  PE
Sbjct: 556 IVKLWGYDEGINYYIGIGHSGAITRLQISPDQKNLVSVGAEGAIFIWKIPE 606

Source: Ichthyophthirius multifiliis

Species: Ichthyophthirius multifiliis

Genus: Ichthyophthirius

Order: Hymenostomatida

Class: Oligohymenophorea

Superkingdom: Eukaryota

>gi|148229872|ref|NP_001089460.1| WD repeat domain 16 [Xenopus laevis] gi|66911513|gb|AAH97599.1| MGC114828 protein [Xenopus laevis]

 Score =  352 bits (904), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 179/415 (43%), Positives = 258/415 (62%), Gaps = 14/415 (3%)

Query: 1   MKTTPNDEFAYCGTTSGDILKLN-----LNY-PSDLSKVESDTAAVLMGCYGKLIKKKVS 54
           ++   +D   YCGTT+GDILK+N     LN       K      A+ +   G+L+     
Sbjct: 207 LQVAEDDSCFYCGTTTGDILKINTKNKLLNSCAPQKGKFSLGVTALTLLKTGELLVGSGD 266

Query: 55  TKLKDVNAEDVSLYSAGVTALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGF 114
            KL      +   Y A  T    ++    ++S+      ++ FVGT   +I+  +    F
Sbjct: 267 GKLALCKGPN---YKAAKT----VQLQGSVNSISLRGQGHQFFVGTGGAQIYRFNYPE-F 318

Query: 115 TLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVF 174
              L+ TCH+ AI D+ FP   S +FATCSKNDIR+W   T  ELLR++V NM C  I F
Sbjct: 319 KEELITTCHSEAINDITFPFGTSELFATCSKNDIRVWHTTTHKELLRVTVPNMTCLAIDF 378

Query: 175 TYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVR 234
           T DGK+I+S WNDG IR F P+SG+L + I NAH+ GVTA+A T D  R++SGGGEGQVR
Sbjct: 379 TRDGKSIISAWNDGRIRAFMPESGRLIYCIENAHSMGVTAIAATSDCKRIVSGGGEGQVR 438

Query: 235 IWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP 294
           IW++ +E+Q L   +KEH SSV+ I++K +++E ++AS+DGTC++WD+++ TR+ +++  
Sbjct: 439 IWEIGKETQRLVQSMKEHKSSVTCIKLKGNNRECLTASSDGTCIIWDIVRFTRIQMVLSN 498

Query: 295 SMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLT 354
           ++     YHP E Q +T  T++ I YWE  DGS IR LEGS   A+N +D  D+G +F+T
Sbjct: 499 TLFRCVCYHPEEFQFVTSGTDRKIGYWEVFDGSAIRELEGSMSGAINGMDICDEGSHFVT 558

Query: 355 GGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFP 409
           GG D++VK+W Y EG    +GIGH+ +IT++KI P  K I+SVS DG I  W +P
Sbjct: 559 GGDDKLVKVWEYNEGEVTHMGIGHSGNITRLKICPISKYIISVSTDGAILRWEYP 613

Source: Xenopus laevis

Species: Xenopus laevis

Genus: Xenopus

Family: Pipidae

Order: Anura

Class: Amphibia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|163915117|ref|NP_001106545.1| WD repeat domain 16 [Xenopus (Silurana) tropicalis] gi|159155496|gb|AAI54923.1| LOC100127736 protein [Xenopus (Silurana) tropicalis]

 Score =  352 bits (902), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 177/415 (42%), Positives = 255/415 (61%), Gaps = 14/415 (3%)

Query: 1   MKTTPNDEFAYCGTTSGDILKLNL------NYPSDLSKVESDTAAVLMGCYGKLIKKKVS 54
           ++   +D   YCGT+SGDIL +N       ++     K      A+ +   G+L+     
Sbjct: 207 LQVAEDDSCFYCGTSSGDILTINTKSKLLSSFAPQKGKFSLGVTALRLLKTGELLVGSGD 266

Query: 55  TKLKDVNAEDVSLYSAGVTALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGF 114
            KL      +   Y A  T    ++    ++S+      ++ FVGT   +I+       F
Sbjct: 267 GKLALCKGPN---YKAAKT----VQLQGSVTSISLRGQGHQFFVGTGGAQIYRFSYPE-F 318

Query: 115 TLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVF 174
              L+ TCH+ AI D+ FP   S +FATCSKNDIR+W   T  ELLRI+V NM C  I F
Sbjct: 319 KEELIATCHSEAINDIAFPFGTSELFATCSKNDIRVWHTATHKELLRITVPNMTCLAIDF 378

Query: 175 TYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVR 234
             DGK+I+S WNDG IR F P+SG+L + I NAH+ GVTA+A T D  R++SGGGEGQVR
Sbjct: 379 MRDGKSIISAWNDGRIRAFMPESGRLMYCIENAHSMGVTAIAATSDCKRIVSGGGEGQVR 438

Query: 235 IWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP 294
           IW++++E+Q L   +KEH SSV+ I++K +++E ++AS+DGTC++WD+++ TRL +++  
Sbjct: 439 IWEISKETQRLVQSMKEHKSSVTCIKLKGNNRECLTASSDGTCIIWDIVRFTRLQMVLSN 498

Query: 295 SMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLT 354
           ++     YHP E Q +T  T++ + YWE  DGS IR LEGS   A+N +D  D G +F+T
Sbjct: 499 TLFRCVCYHPEEFQFVTSGTDRKVGYWEVFDGSAIRELEGSKSGAINGMDICDQGAHFVT 558

Query: 355 GGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFP 409
           GG D++VK+W Y EG    VGIGH+ +IT++KI P  K I+SVS DG I  W +P
Sbjct: 559 GGDDKLVKVWDYNEGEVTHVGIGHSGNITRLKICPLSKYIISVSTDGAILCWDYP 613

Source: Xenopus (Silurana) tropicalis

Species: Xenopus (Silurana) tropicalis

Genus: Xenopus

Family: Pipidae

Order: Anura

Class: Amphibia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	515
UNIPROTKB|E1BQP9	619	WDR16 "Uncharacterized protein	0.782	0.651	0.424	4.6e-89
UNIPROTKB|E1BKF9	623	WDR16 "Uncharacterized protein	0.772	0.638	0.431	6.9e-86
ZFIN|ZDB-GENE-050522-296	617	wdr16 "WD repeat domain 16" [D	0.776	0.648	0.420	3.8e-85
UNIPROTKB|Q8N1V2	620	WDR16 "WD repeat-containing pr	0.780	0.648	0.420	6.2e-85
UNIPROTKB|E2RJL4	620	WDR16 "Uncharacterized protein	0.772	0.641	0.424	2.7e-84
RGD|1308151	620	Wdr16 "WD repeat domain 16" [R	0.772	0.641	0.421	2.7e-84
MGI|MGI:1919110	620	Wdr16 "WD repeat domain 16" [M	0.772	0.641	0.419	1.2e-83
FB|FBgn0035724	742	CG10064 [Drosophila melanogast	0.605	0.420	0.421	7.7e-70
UNIPROTKB|F1SS88	123	WDR16 "Uncharacterized protein	0.209	0.878	0.5	2e-26
ASPGD|ASPL0000032162	1364	AN8468 [Emericella nidulans (t	0.625	0.236	0.255	3.3e-22

UNIPROTKB|E1BQP9 WDR16 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 889 (318.0 bits), Expect = 4.6e-89, P = 4.6e-89
 Identities = 175/412 (42%), Positives = 250/412 (60%)

Query:     1 MKTTPNDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMGCYGXXXXXXXXXXXXDV 60
             ++   +D + Y GT++GD+LK+N       +K+ +D         G             +
Sbjct:   211 LQIADDDNYFYVGTSTGDVLKVNTR-----NKLMTDFGPQKKFSLGVTALLLLKTGDVII 265

Query:    61 NAED--VSLYS-AGVTALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLT 117
                +  V+L   +    +  ++   G++SL      ++ FVGT  C+I+ ++  + F   
Sbjct:   266 GTGEGTVALCKGSNYRVMKNIQVHGGVTSLTRRGQGHQFFVGTKMCQIYRVNYTA-FKEE 324

Query:   118 LVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYD 177
             L+ TCH+ A++D+ FP   S +FATCSK+DIR+W      ELLRI + NM C  I F  D
Sbjct:   325 LITTCHSEAVHDIVFPFGTSDLFATCSKDDIRVWHTPEHRELLRIVIPNMTCYAIEFMRD 384

Query:   178 GKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWK 237
             GK+I+S WNDG IR F P+SG+  ++I NAH+RGVTA+A T D  R++SGGGEGQVR+W 
Sbjct:   385 GKSIISAWNDGKIRAFMPESGREMYVINNAHSRGVTAIAATSDCKRIVSGGGEGQVRVWA 444

Query:   238 LTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRXXXXXXXXXX 297
             +  +++ L+ VLKEH S+VS I+IK + KE ++AS DGTC++WD+ + TR          
Sbjct:   445 IGEKTRKLEGVLKEHISAVSCIKIKKNDKECVTASLDGTCIIWDIGRFTRKQMILANTLF 504

Query:   298 XXAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA 357
                 YHP E QLIT  T++ I YWE  DGS IR LEGS   ++N +D   DG YF+TGG 
Sbjct:   505 KCVCYHPEEYQLITSGTDRRIGYWEVYDGSAIRDLEGSLSGSINGMDITSDGAYFVTGGD 564

Query:   358 DQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFP 409
             D +VKMW Y EG    +G+GH+ +IT++KI P  K IVSVSADG I LW +P
Sbjct:   565 DHLVKMWDYNEGTVTHIGVGHSGNITRLKICPGNKYIVSVSADGAILLWKYP 616

GO:0005737 "cytoplasm" evidence=IEA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IEA

UNIPROTKB|E1BKF9 WDR16 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 859 (307.4 bits), Expect = 6.9e-86, P = 6.9e-86
 Identities = 176/408 (43%), Positives = 248/408 (60%)

Query:     6 NDEFAYCGTTSGDILKLNLNYPSDLSKVESDTA-AVLMGCYGXXXXXXXXXXXXDVNAED 64
             +D F Y GTT+GDILK+N   P   +K+ +DT  A      G             V + D
Sbjct:   219 DDSFFYLGTTTGDILKMN---PR--TKLLADTGPAKDKFSLGVSAICCLKMGGLLVGSGD 273

Query:    65 ---VSLYSAGVTALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNT 121
                V   S     +  ++   GI+S+      ++ FVGT    I+ ++  + F  TL+ T
Sbjct:   274 GLLVFCKSPSYKPIKKIQLQGGITSITLRGEGHQFFVGTEESHIYRVNFTN-FKETLITT 332

Query:   122 CHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAI 181
             CH  ++ D+ FP   + +FATC+K DIR+W   T  ELLRI+V NM C  I F  DGK+I
Sbjct:   333 CHFESVEDIVFPFGTAELFATCAKKDIRVWHTLTNRELLRITVPNMTCHGIDFMRDGKSI 392

Query:   182 LSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRE 241
             +S W+DG IR F P++G+L ++I NAH  GVTA+A T D  R++SGGGEG+VR+W +  +
Sbjct:   393 ISAWDDGRIRAFAPETGRLMYVINNAHRIGVTAIATTSDCKRVISGGGEGEVRVWHIGHQ 452

Query:   242 SQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRXXXXXXXXXXXXAA 301
             +Q L+  LKEH SSVS I++K  ++E ++ASTDGTC++WDL++  R              
Sbjct:   453 TQKLEEALKEHKSSVSCIRVKKSNEECVTASTDGTCIIWDLVRLRRNQMILANTLFQCVC 512

Query:   302 YHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIV 361
             YHP E Q+IT  T++ I YWE  DGS+IR L+GS   AVN +D   +G +F+TGG D +V
Sbjct:   513 YHPEEFQIITSGTDRKIAYWEVFDGSVIRELDGSLSGAVNGMDITVEGVHFVTGGNDHLV 572

Query:   362 KMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFP 409
             K+W Y EG    VG+GH+ +IT+I+ISP  + IVSVSADG I  W +P
Sbjct:   573 KVWDYNEGEVTHVGVGHSGNITRIRISPGNQYIVSVSADGAILRWKYP 620

GO:0043231 "intracellular membrane-bounded organelle" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

ZFIN|ZDB-GENE-050522-296 wdr16 "WD repeat domain 16" [Danio rerio (taxid:7955)]

 Score = 852 (305.0 bits), Expect = 3.8e-85, P = 3.8e-85
 Identities = 173/411 (42%), Positives = 250/411 (60%)

Query:     5 PNDE-FAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMG-CYGXXXXXXXXXXXXDVNA 62
             PND+ + YCGTTSGDILK+NL      +++ S    V      G             V +
Sbjct:   211 PNDDNYFYCGTTSGDILKVNLK-----TRLLSSCGPVKQKFSKGVNTLKVLKTGDILVGS 265

Query:    63 ED--VSLYS-AGVTALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLV 119
              D  ++L S A    +  ++ + G++S+      ++ +VGT   +++ +     F   L 
Sbjct:   266 GDGMLTLCSGANFKTIKSVQLEGGVTSVTLRGDGHQFYVGTEAAQMYSLSYTD-FKPELT 324

Query:   120 NTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGK 179
              T H SA+ D+ FP   S +FATCS NDIR+W   +  ELLRI+V N+ C  + F  DG+
Sbjct:   325 ATNHNSAVKDVAFPFGTSELFATCSHNDIRVWHSESSKELLRITVPNITCHALGFMRDGR 384

Query:   180 AILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLT 239
             +I S WNDG IR FTP+SGKLK II NAH+  VT +A T D  R++SGGGEGQVR+W++ 
Sbjct:   385 SIFSAWNDGKIRVFTPESGKLKLIIHNAHSMAVTTIAATNDCKRIVSGGGEGQVRVWEIF 444

Query:   240 RESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRXXXXXXXXXXXX 299
             ++S  L   +KEH ++V+ I+IKS+ KE ++AS+DG C++WDL++  R            
Sbjct:   445 QDSYRLIETMKEHKATVNCIKIKSNDKECVTASSDGACIIWDLVRFVRNQMVLSNTLFSV 504

Query:   300 AAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQ 359
               YHP E Q+IT  T++ I YWE  DGS IR LEGS   ++N +   +DGKYF+TGG D+
Sbjct:   505 VCYHPEEYQIITSGTDRKIGYWEVYDGSAIRELEGSLSGSINGMHISEDGKYFVTGGDDK 564

Query:   360 IVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPE 410
             ++K+W+Y +G    VGIGH+ SIT ++I P+ + IVS SADG I  W +P+
Sbjct:   565 LLKLWLYSDGEVTHVGIGHSGSITNVRICPNSRYIVSTSADGAILRWRYPQ 615

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

UNIPROTKB|Q8N1V2 WDR16 "WD repeat-containing protein 16" [Homo sapiens (taxid:9606)]

 Score = 850 (304.3 bits), Expect = 6.2e-85, P = 6.2e-85
 Identities = 170/404 (42%), Positives = 241/404 (59%)

Query:     6 NDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMGCYGXXXXXXXXXXXXDVNAEDV 65
             +D F Y GTT+GDILK+N      L+ V        +G                     V
Sbjct:   216 DDSFFYLGTTTGDILKMNPRTKL-LTDVGPAKDKFSLGVSAIRCLKMGGLLVGSGAGLLV 274

Query:    66 SLYSAGVTALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTS 125
                S G   +  ++   GI+S+      ++  VGT    I+ +     F  TL+ TCH  
Sbjct:   275 FCKSPGYKPIKKIQLQGGITSITLRGEGHQFLVGTEESHIYRVSFTD-FKETLIATCHFD 333

Query:   126 AIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGW 185
             A+ D+ FP   + +FATC+K DIR+W   +  ELLRI+V NM C  I F  DGK+I+S W
Sbjct:   334 AVEDIVFPFGTAELFATCAKKDIRVWHTSSNRELLRITVPNMTCHGIDFMRDGKSIISAW 393

Query:   186 NDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSL 245
             NDG IR F P++G+L ++I NAH  GVTA+A T D  R++SGGGEG+VR+W++  ++Q L
Sbjct:   394 NDGKIRAFAPETGRLMYVINNAHRIGVTAIATTSDCKRVISGGGEGEVRVWQIGCQTQKL 453

Query:   246 QCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRXXXXXXXXXXXXAAYHPS 305
             +  LKEH SSVS I++K +++E ++ASTDGTC++WDL++  R              YHP 
Sbjct:   454 EEALKEHKSSVSCIRVKRNNEECVTASTDGTCIIWDLVRLRRNQMILANTLFQCVCYHPE 513

Query:   306 EVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWM 365
             E Q+IT  T++ I YWE  DG++IR LEGS   ++N +D   +G +F+TGG D +VK+W 
Sbjct:   514 EFQIITSGTDRKIAYWEVFDGTVIRELEGSLSGSINGMDITQEGVHFVTGGNDHLVKVWD 573

Query:   366 YREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFP 409
             Y EG    VG+GH+ +IT+I+ISP  + IVSVSADG I  W +P
Sbjct:   574 YNEGEVTHVGVGHSGNITRIRISPGNQYIVSVSADGAILRWKYP 617

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=IDA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

UNIPROTKB|E2RJL4 WDR16 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 844 (302.2 bits), Expect = 2.7e-84, P = 2.7e-84
 Identities = 173/408 (42%), Positives = 250/408 (61%)

Query:     6 NDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVL-MGCYGXXXXXXXXXXXXDVNA-E 63
             +D F + GTT+GDILK+N   P   +K+ +DT  V      G             V +  
Sbjct:   216 DDSFFFLGTTTGDILKMN---PR--TKLLADTGPVKDKFSLGVSAIRCLKMGGLLVGSGA 270

Query:    64 DVSLY--SAGVTALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNT 121
              + ++  S     +  ++   GI+S+      ++ FVGT    I+ I+    F  TL+ T
Sbjct:   271 GLLIFCKSPSYKPIKKVQLQGGITSITLRGEGHQFFVGTEESHIYRINFTD-FKETLIAT 329

Query:   122 CHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAI 181
             CH  A+ D+ FP   + +FATC+K DIR+W   +  ELLRI+V NM C  I F  DGK+I
Sbjct:   330 CHFEAVEDIIFPFGTAELFATCAKKDIRVWHTLSNRELLRITVPNMTCHGIDFMKDGKSI 389

Query:   182 LSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRE 241
             +S W+DG IR F P++G+L ++I NAH  GVTA+A T D  R++SGGGEG+VR+W++  +
Sbjct:   390 ISAWDDGRIRAFAPETGRLMYVINNAHRIGVTAIATTSDCKRVISGGGEGEVRVWQIGCQ 449

Query:   242 SQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRXXXXXXXXXXXXAA 301
             +Q L+  LKEH SSVS I++K +++E ++ASTDGTC++WDL++  R              
Sbjct:   450 TQKLEEALKEHKSSVSCIRVKKNNEECVTASTDGTCIIWDLVRLRRNQMILANTLFQCVC 509

Query:   302 YHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIV 361
             YHP E Q+IT  T++ I YWE  DGS+IR LEGS   ++N +D   +G +F+TGG D +V
Sbjct:   510 YHPEEFQIITSGTDRKIAYWEVFDGSVIRELEGSLSGSINGMDITLEGVHFVTGGNDHLV 569

Query:   362 KMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFP 409
             K+W Y EG    VG+GH+ +IT+I+ISP  + IVSVSADG I  W +P
Sbjct:   570 KVWDYNEGEVTHVGVGHSGNITRIRISPGNQYIVSVSADGAILRWKYP 617

GO:0043231 "intracellular membrane-bounded organelle" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

RGD|1308151 Wdr16 "WD repeat domain 16" [Rattus norvegicus (taxid:10116)]

 Score = 844 (302.2 bits), Expect = 2.7e-84, P = 2.7e-84
 Identities = 172/408 (42%), Positives = 248/408 (60%)

Query:     6 NDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVL-MGCYGXXXXXXXXXXXXDVNA-E 63
             +D F Y GTT+GDILK+N   P   +K+ +DT  +      G             V +  
Sbjct:   216 DDSFFYLGTTTGDILKIN---PK--TKLLADTGPMKDKFSLGVSALRCLKMGGLLVGSGA 270

Query:    64 DVSLY--SAGVTALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNT 121
              + ++  S     +  L+   GI+S+      ++ FVGT    I+ ++    F  TL+ T
Sbjct:   271 GLLIFCKSPSYKPIKKLQLQGGITSITLRGEGHQFFVGTEESHIYRVNFTD-FKETLIAT 329

Query:   122 CHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAI 181
             CH  A+ D+ FP   + +FATC+K DIR+W   +  ELLRI+V NM C  I F  DGK+I
Sbjct:   330 CHFEAVQDIVFPFGTAELFATCAKKDIRVWHTMSKRELLRITVPNMTCHGIDFMRDGKSI 389

Query:   182 LSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRE 241
             +S W+DG IR F P+SG+L + I +AH  GVTA+A T D  R++SGGGEG+VR+W++  +
Sbjct:   390 ISAWDDGKIRAFAPESGRLMYTINSAHRIGVTAIATTSDCKRIISGGGEGEVRVWQIGCQ 449

Query:   242 SQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRXXXXXXXXXXXXAA 301
             +Q L+  LKEH SSVS I++K +++E ++ASTDGTC++WDL++  R              
Sbjct:   450 TQKLEEALKEHKSSVSCIRVKKNNEECVTASTDGTCIIWDLVRLRRNQMILANTLFQCVC 509

Query:   302 YHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIV 361
             YHP E Q+IT  T++ I YWE  DGS+IR LEGS   +VN +D   +G++F+TGG D ++
Sbjct:   510 YHPEEFQIITSGTDRKIAYWEVFDGSVIRELEGSLSGSVNGMDITQEGEHFVTGGHDHLI 569

Query:   362 KMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFP 409
             K+W Y EG    VG+GH+ +I  I+ISP  + IVSVSADG I  W +P
Sbjct:   570 KVWDYNEGEVTHVGVGHSGNIMGIRISPGNQYIVSVSADGAILRWKYP 617

GO:0005737 "cytoplasm" evidence=IEA;ISO

GO:0043231 "intracellular membrane-bounded organelle" evidence=IEA;ISO

MGI|MGI:1919110 Wdr16 "WD repeat domain 16" [Mus musculus (taxid:10090)]

 Score = 838 (300.0 bits), Expect = 1.2e-83, P = 1.2e-83
 Identities = 171/408 (41%), Positives = 247/408 (60%)

Query:     6 NDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVL-MGCYGXXXXXXXXXXXXDVNA-E 63
             +D F Y GTT+GDILK+N   P   +K+ +DT  V      G             V +  
Sbjct:   216 DDSFFYLGTTTGDILKMN---PK--TKLLADTGPVKDKFSLGVSALRCLKMGGLLVGSGA 270

Query:    64 DVSLY--SAGVTALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNT 121
              + ++  S     +  ++   GI+S+      ++ FVGT    I+ ++    F  TL+ T
Sbjct:   271 GLLIFCKSPSYKPIKKVQLQGGITSITLRGEGHQFFVGTEESHIYRVNFTD-FKETLIAT 329

Query:   122 CHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAI 181
             CH  A+ D+ FP   + +FATC+K DIR+W   +  ELLRI+V NM C  I F  DGK+I
Sbjct:   330 CHFEAVQDIVFPFGTAELFATCAKKDIRVWHTMSKRELLRITVPNMTCHGIDFMRDGKSI 389

Query:   182 LSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRE 241
             +S W+DG IR F P+SG+L + I +AH  GVTA+A T D  R++SGGGEG+VR+W++  +
Sbjct:   390 ISAWDDGKIRAFAPESGRLMYTINSAHRIGVTAIATTSDCKRIISGGGEGEVRVWQVGCQ 449

Query:   242 SQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRXXXXXXXXXXXXAA 301
             +Q L+  LKEH SSVS I++K +++E ++ASTDGTC++WDL++  R              
Sbjct:   450 TQKLEEALKEHKSSVSCIRVKKNNEECVTASTDGTCIIWDLVRLRRNQMILANTLFQCVC 509

Query:   302 YHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIV 361
             YHP E Q+IT  T++ I YWE  DGS+IR LEGS   ++N +D   +G +F+TGG D +V
Sbjct:   510 YHPEEFQIITSGTDRKIAYWEVFDGSVIRELEGSLSGSINGMDITQEGGHFVTGGHDHLV 569

Query:   362 KMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFP 409
             K+W Y EG    VG+GH+ +I  ++ISP  + IVSVSADG I  W +P
Sbjct:   570 KVWDYNEGEVTHVGVGHSGNIMAMRISPGNQYIVSVSADGAILRWKYP 617

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=IEA

GO:0008150 "biological_process" evidence=ND

FB|FBgn0035724 CG10064 [Drosophila melanogaster (taxid:7227)]

 Score = 689 (247.6 bits), Expect = 7.7e-70, Sum P(2) = 7.7e-70
 Identities = 132/313 (42%), Positives = 192/313 (61%)

Query:    97 FVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTL 156
             ++ T   EI+ +++ + + L L+ TCHT ++Y + FP N+S VFAT  K  IRIWS    
Sbjct:   341 YICTDTNEIYGLNIKT-WVLKLLRTCHTKSVYCITFPKNYSGVFATSGKECIRIWSSGRK 399

Query:   157 NELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALA 216
              ELLRI V N  CAC+ FT+DG +I+S WNDG IR FTP +G+L + IPNAHN+G +ALA
Sbjct:   400 QELLRIMVYNFNCACVRFTHDGTSIVSVWNDGIIRAFTPITGRLIYAIPNAHNKGCSALA 459

Query:   217 ITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGT 276
             +   G  +++GG EGQVR+WK+    Q L  VLK+H+  ++ + I     E +SA TDG+
Sbjct:   460 VASSGRLIVTGGIEGQVRVWKIDPYRQDLVGVLKDHSGPITSLDINYLDTEVISACTDGS 519

Query:   277 CVLWDLIKSTRXXXXXXXXXXXXAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSD 336
             CV+WD+ + TR            A+Y P+ VQ+ITC ++  I YW   +G++IR L  S 
Sbjct:   520 CVIWDIKRMTRKQVVTANTQFMSASYFPTGVQVITCGSDGRIIYWMVYNGALIRELTASK 579

Query:   337 VAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVS 396
              ++VNC+   + G YF+T G+D  VK+W Y  G    +G  HA+S+     SP   + V+
Sbjct:   580 KSSVNCLAINETGDYFITVGSDLQVKLWDYNSGAVVGIGSEHASSVISCAYSPCMTMFVT 639

Query:   397 VSADGGIFLWTFP 409
              S DG + +W  P
Sbjct:   640 GSTDGSLIIWDVP 652

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|F1SS88 WDR16 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 300 (110.7 bits), Expect = 2.0e-26, P = 2.0e-26
 Identities = 54/108 (50%), Positives = 74/108 (68%)

Query:   302 YHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIV 361
             YHP E Q+IT  T++ I YWE  DGS IR L+GS   ++N +D   +G +F+TGG D +V
Sbjct:    13 YHPEEFQIITSGTDRKIAYWEVFDGSGIRELDGSLSGSINGMDITPEGVHFVTGGNDHLV 72

Query:   362 KMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFP 409
             K+W Y EG    VG+GH+ +IT+++ISP  + IVSVSADG I  W +P
Sbjct:    73 KVWDYNEGEVTHVGVGHSGNITRVRISPGNEYIVSVSADGAILRWKYP 120

GO:0043231 "intracellular membrane-bounded organelle" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

ASPGD|ASPL0000032162 AN8468 [Emericella nidulans (taxid:162425)]

 Score = 282 (104.3 bits), Expect = 3.3e-22, Sum P(2) = 3.3e-22
 Identities = 85/333 (25%), Positives = 154/333 (46%)

Query:    78 LKDDSG-ISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNF 136
             L+  SG + S+ ++P   K+  G+    + L +  +G  L  +   H+ ++  + F  + 
Sbjct:   914 LEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEG-HSQSVRSVAFSPDG 972

Query:   137 SSVFATCSKNDIRIWSVRTLNELLR-ISVMNMICACIVFTYDGKAILSGWNDGFIRCFTP 195
               + ++ S   I++W+  T  EL +     ++    + F+ DGK ++SG +D  I+ +  
Sbjct:   973 KQLASSSSDTTIKLWN-STTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDL 1031

Query:   196 QSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSS 255
              + +L+  + + H+R V A+A + D  +L S   +  +++W     +  LQ  L+ H+  
Sbjct:  1032 ATSELQQSLED-HSRSVHAVAFSPDDKQLASSSLDSTIKLWDSA--TGELQRTLEGHSQG 1088

Query:   256 VSVIQIKSDSKEAMSASTDGTCVLWD-LIKSTRXXXXXXXXXXXXAAYHPSEVQLITCST 314
             V  +    D K   S S DGT  LW+ L    +             A+ P   QL +   
Sbjct:  1089 VRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYY 1148

Query:   315 NKMIDYWETCDGSIIRSLEG-SDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCF 373
             +  I  W++  G ++++LEG SD   +  V F  DGK   +G  DQ  K+W    G    
Sbjct:  1149 DSTIKLWDSATGELLQTLEGHSD--RIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQ 1206

Query:   374 VGIGHAASITKIKISPDKKVIVSVSADGGIFLW 406
             +  GH+  +  +  SPD K++ S S    I LW
Sbjct:  1207 IFEGHSKWVESVAFSPDGKLLASSSYGETIKLW 1239

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5F201	WDR16_MOUSE	No assigned EC number	0.4196	0.7553	0.6274	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	515
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	2e-36
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	4e-33
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	3e-32
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	2e-26
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	7e-26
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	2e-23
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	1e-21
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	9e-21
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	2e-18
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	8e-18
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	9e-07
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	2e-04
smart00320	40	smart00320, WD40, WD40 repeats	2e-04
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	0.001
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	0.001
smart00320	40	smart00320, WD40, WD40 repeats	0.001
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	0.002
smart00320	40	smart00320, WD40, WD40 repeats	0.002
smart00320	40	smart00320, WD40, WD40 repeats	0.002

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  136 bits (344), Expect = 2e-36
 Identities = 75/287 (26%), Positives = 125/287 (43%), Gaps = 9/287 (3%)

Query: 123 HTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAIL 182
           HT  +  + F  +   +        I++W + T   L  +         +  + DG  + 
Sbjct: 8   HTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLA 67

Query: 183 SGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRES 242
           SG +D  IR +  ++G+    +   H   V+++A + DG  L S   +  +++W +    
Sbjct: 68  SGSSDKTIRLWDLETGECVRTL-TGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGK 126

Query: 243 QSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSM---IMS 299
                 L+ HT  V+ +    D     S+S DGT  LWDL   T   +  L      + S
Sbjct: 127 CLT--TLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDL--RTGKCVATLTGHTGEVNS 182

Query: 300 AAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQ 359
            A+ P   +L++ S++  I  W+   G  + +L G +   VN V F  DG    +G  D 
Sbjct: 183 VAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHE-NGVNSVAFSPDGYLLASGSEDG 241

Query: 360 IVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLW 406
            +++W  R G       GH  S+T +  SPD K + S SADG I +W
Sbjct: 242 TIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIW 288

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  127 bits (320), Expect = 4e-33
 Identities = 75/303 (24%), Positives = 114/303 (37%), Gaps = 65/303 (21%)

Query: 208 HNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKE 267
           H  GVT +A + DG  L +G G+G +++W L  E+  L   LK HT  V  +   +D   
Sbjct: 8   HTGGVTCVAFSPDGKLLATGSGDGTIKVWDL--ETGELLRTLKGHTGPVRDVAASADGTY 65

Query: 268 AMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGS 327
             S S+D T  LWDL                                           G 
Sbjct: 66  LASGSSDKTIRLWDLET-----------------------------------------GE 84

Query: 328 IIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKI 387
            +R+L G   + V+ V F  DG+   +   D+ +K+W    G       GH   +  +  
Sbjct: 85  CVRTLTGHT-SYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAF 143

Query: 388 SPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSA 447
           SPD   + S S DG I LW          D R+              L        + S 
Sbjct: 144 SPDGTFVASSSQDGTIKLW----------DLRTGKCV--------ATLTGHTGE--VNSV 183

Query: 448 AYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQI 507
           A+ P   +L++ S++  I  W+   G  + +L G +   VN V F  DG    +G  D  
Sbjct: 184 AFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHE-NGVNSVAFSPDGYLLASGSEDGT 242

Query: 508 VKI 510
           +++
Sbjct: 243 IRV 245

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  124 bits (314), Expect = 3e-32
 Identities = 79/300 (26%), Positives = 129/300 (43%), Gaps = 25/300 (8%)

Query: 171 CIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGE 230
           C+ F+ DGK + +G  DG I+ +  ++G+L   +   H   V  +A + DGT L SG  +
Sbjct: 14  CVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKG-HTGPVRDVAASADGTYLASGSSD 72

Query: 231 GQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLII 290
             +R+W L  E+      L  HTS VS +    D +   S+S D T  +WD+     L  
Sbjct: 73  KTIRLWDL--ETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTT 130

Query: 291 MILPSM-IMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDG 349
           +   +  + S A+ P    + + S +  I  W+   G  + +L G     VN V F  DG
Sbjct: 131 LRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHT-GEVNSVAFSPDG 189

Query: 350 KYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFP 409
           +  L+  +D  +K+W    G       GH   +  +  SPD  ++ S S DG I +W   
Sbjct: 190 EKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVW--- 246

Query: 410 ELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWE 469
               D+  +      +S  T              + S A+ P   +L + S +  I  W+
Sbjct: 247 ----DL-RTGECVQTLSGHTNS------------VTSLAWSPDGKRLASGSADGTIRIWD 289

Length = 289

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score =  112 bits (279), Expect = 2e-26
 Identities = 95/340 (27%), Positives = 153/340 (45%), Gaps = 13/340 (3%)

Query: 76  YLLKDDSGISSLQYNPVNNKVFV---GTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQF 132
                DS +S L  +  +    +    +++  + L D+++   L      H+ ++  L F
Sbjct: 104 LEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAF 163

Query: 133 -PVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGK-AILSGWNDGFI 190
            P        +     I++W +RT   L  ++      + + F+ DG   I SG +DG I
Sbjct: 164 SPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTI 223

Query: 191 RCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLK 250
           R +   +GKL     + H+  V + + + DG+ L SG  +G +R+W L R S SL   L 
Sbjct: 224 RLWDLSTGKLLRSTLSGHSDSVVS-SFSPDGSLLASGSSDGTIRLWDL-RSSSSLLRTLS 281

Query: 251 EHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP---SMIMSAAYHPSEV 307
            H+SSV  +    D K   S S+DGT  LWDL     L  + L      + S ++ P   
Sbjct: 282 GHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGS 341

Query: 308 QLIT-CSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMY 366
            L++  S +  I  W+   G  +++LEG     V  V F  DG+   +G  D  V++W  
Sbjct: 342 LLVSGGSDDGTIRLWDLRTGKPLKTLEGHS--NVLSVSFSPDGRVVSSGSTDGTVRLWDL 399

Query: 367 REGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLW 406
             G       GH + +T +  SPD K + S S+D  I LW
Sbjct: 400 STGSLLRNLDGHTSRVTSLDFSPDGKSLASGSSDNTIRLW 439

Length = 466

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score =  110 bits (274), Expect = 7e-26
 Identities = 97/414 (23%), Positives = 175/414 (42%), Gaps = 35/414 (8%)

Query: 77  LLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTC-HTSAIYDLQFPVN 135
           L   +  I+S+ ++P    +  G+ +  I L D+++G  L       H S++  L     
Sbjct: 61  LRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSP 120

Query: 136 FSSVFATCS---KNDIRIWSVRTLNELLR-ISVMNMICACIVFTYDGKAILSGWN-DGFI 190
             +     S      +++W + T  +L+R +   +     + F+ DGK + SG + DG I
Sbjct: 121 DGNSILLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTI 180

Query: 191 RCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGE-GQVRIWKLTRESQSLQCVL 249
           + +  ++GK    +   H   V++LA + DG  L++ G   G +R+W L    + L+  L
Sbjct: 181 KLWDLRTGKPLSTLAG-HTDPVSSLAFSPDGGLLIASGSSDGTIRLWDL-STGKLLRSTL 238

Query: 250 KEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP--SMIMSAAYHPSEV 307
             H+ SV V     D     S S+DGT  LWDL  S+ L+  +    S ++S A+ P   
Sbjct: 239 SGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGK 297

Query: 308 QLITCSTNKMIDYWETCDGSIIRSLEGSD-VAAVNCVDFVDDGKYFLTGGA-DQIVKMWM 365
            L + S++  +  W+   G ++ SL        V+ + F  DG   ++GG+ D  +++W 
Sbjct: 298 LLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWD 357

Query: 366 YREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKI 425
            R G      +   +++  +  SPD +V+ S S DG + LW                   
Sbjct: 358 LRTG-KPLKTLEGHSNVLSVSFSPDGRVVSSGSTDGTVRLWDLSTGSLLR---------- 406

Query: 426 SRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSL 479
                      +    S + S  + P    L + S++  I  W+        S 
Sbjct: 407 ----------NLDGHTSRVTSLDFSPDGKSLASGSSDNTIRLWDLKTSLKSVSF 450

Length = 466

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score =  102 bits (255), Expect = 2e-23
 Identities = 83/315 (26%), Positives = 141/315 (44%), Gaps = 5/315 (1%)

Query: 53  VSTKLKDVNAEDVSLYSAGVTALYLLKDDSGISSLQYNPVNNKVFVG-TVNCEIFLIDMN 111
           +++   D   +   L + G     L      ++SL ++P    +  G +++  I L D+ 
Sbjct: 127 LASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLR 186

Query: 112 SGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSK-NDIRIWSVRTLNELLRISVMNMICA 170
           +G  L+ +   HT  +  L F  +   + A+ S    IR+W + T   L      +    
Sbjct: 187 TGKPLSTLAG-HTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSV 245

Query: 171 CIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGE 230
              F+ DG  + SG +DG IR +  +S        + H+  V ++A + DG  L SG  +
Sbjct: 246 VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSD 305

Query: 231 GQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSD-SKEAMSASTDGTCVLWDLIKSTRLI 289
           G VR+W L          LK H   VS +    D S      S DGT  LWDL     L 
Sbjct: 306 GTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLK 365

Query: 290 IMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDG 349
            +   S ++S ++ P    + + ST+  +  W+   GS++R+L+G   + V  +DF  DG
Sbjct: 366 TLEGHSNVLSVSFSPDGRVVSSGSTDGTVRLWDLSTGSLLRNLDG-HTSRVTSLDFSPDG 424

Query: 350 KYFLTGGADQIVKMW 364
           K   +G +D  +++W
Sbjct: 425 KSLASGSSDNTIRLW 439

Length = 466

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 97.5 bits (241), Expect = 1e-21
 Identities = 90/350 (25%), Positives = 158/350 (45%), Gaps = 33/350 (9%)

Query: 171 CIVFTYDGKAILSGWNDGFIRCFTPQSGKLKF-IIPNAHNRGVTALAI-TQDGTRLLSGG 228
            I F+ DG+ +LSG +DG I+ +   +G+     +   H+  V+ LA+ + DG  +L   
Sbjct: 70  SIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLAS 129

Query: 229 GE--GQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST-DGTCVLWDLIKS 285
               G V++W L+   + ++  L+ H+ SV+ +    D K   S S+ DGT  LWDL   
Sbjct: 130 SSLDGTVKLWDLSTPGKLIR-TLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTG 188

Query: 286 TRLIIMILPSM-IMSAAYHP-SEVQLITCSTNKMIDYWETCDGSIIRS-LEGSDVAAVNC 342
             L  +   +  + S A+ P   + + + S++  I  W+   G ++RS L G   + V+ 
Sbjct: 189 KPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSVVSS 248

Query: 343 VDFVDDGKYFLTGGADQIVKMWMYREGVPCF-VGIGHAASITKIKISPDKKVIVSVSADG 401
             F  DG    +G +D  +++W  R          GH++S+  +  SPD K++ S S+DG
Sbjct: 249 --FSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDG 306

Query: 402 GIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLIT-CS 460
            + LW          D  +     S +               + S ++ P    L++  S
Sbjct: 307 TVRLW----------DLETGKLLSSLTLKGHE--------GPVSSLSFSPDGSLLVSGGS 348

Query: 461 TNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKI 510
            +  I  W+   G  +++LEG     V  V F  DG+   +G  D  V++
Sbjct: 349 DDGTIRLWDLRTGKPLKTLEGHS--NVLSVSFSPDGRVVSSGSTDGTVRL 396

Length = 466

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 92.0 bits (229), Expect = 9e-21
 Identities = 59/246 (23%), Positives = 108/246 (43%), Gaps = 13/246 (5%)

Query: 82  SGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTL-TLVNTCHTSAIYDLQFPVNFSSVF 140
             +  +  +     +  G+ +  I L D+ +G  + TL  T HTS +  + F      + 
Sbjct: 52  GPVRDVAASADGTYLASGSSDKTIRLWDLETGECVRTL--TGHTSYVSSVAF-SPDGRIL 108

Query: 141 ATCSK-NDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGK 199
           ++ S+   I++W V T   L  +         + F+ DG  + S   DG I+ +  ++GK
Sbjct: 109 SSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGK 168

Query: 200 LKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVI 259
               +   H   V ++A + DG +LLS   +G +++W L+  +      L+ H + V+ +
Sbjct: 169 CVATLT-GHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLS--TGKCLGTLRGHENGVNSV 225

Query: 260 QIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP---SMIMSAAYHPSEVQLITCSTNK 316
               D     S S DGT  +WDL   T   +  L    + + S A+ P   +L + S + 
Sbjct: 226 AFSPDGYLLASGSEDGTIRVWDL--RTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADG 283

Query: 317 MIDYWE 322
            I  W+
Sbjct: 284 TIRIWD 289

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 85.5 bits (212), Expect = 2e-18
 Identities = 54/204 (26%), Positives = 77/204 (37%), Gaps = 24/204 (11%)

Query: 329 IRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKIS 388
            R+L+G     V CV F  DGK   TG  D  +K+W    G       GH   +  +  S
Sbjct: 2   RRTLKGHT-GGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAAS 60

Query: 389 PDKKVIVSVSADGGIFLW---------TFPELEDDV------GDSRSLSSKISRSTAR-- 431
            D   + S S+D  I LW         T       V       D R LSS     T +  
Sbjct: 61  ADGTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVW 120

Query: 432 --STRLIIMILP---SMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAA 486
              T   +  L      + S A+ P    + + S +  I  W+   G  + +L G     
Sbjct: 121 DVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHT-GE 179

Query: 487 VNCVDFVDDGKYFLTGGADQIVKI 510
           VN V F  DG+  L+  +D  +K+
Sbjct: 180 VNSVAFSPDGEKLLSSSSDGTIKL 203

Length = 289

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 85.9 bits (211), Expect = 8e-18
 Identities = 83/358 (23%), Positives = 148/358 (41%), Gaps = 28/358 (7%)

Query: 156 LNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTAL 215
            ++LL+ S +      +     G +         +         L  ++   H   +T++
Sbjct: 12  KSKLLKKSELGPSLNSLSLLSLGSSESGILLLALLSDSLVSLPDLSSLLLRGHEDSITSI 71

Query: 216 AITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST-- 273
           A + DG  LLSG  +G +++W L    + ++ +   H SSVS + + S    ++  ++  
Sbjct: 72  AFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSS 131

Query: 274 -DGTCVLWDLIKSTRLI--IMILPSMIMSAAYHPSEVQLITCSTNKM-IDYWETCDGSII 329
            DGT  LWDL    +LI  +      + S A+ P    L + S+    I  W+   G  +
Sbjct: 132 LDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPL 191

Query: 330 RSLEGSDVAAVNCVDFVDDGK-YFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKIS 388
            +L G     V+ + F  DG     +G +D  +++W    G      +   +       S
Sbjct: 192 STLAGHT-DPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSVVSSFS 250

Query: 389 PDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAA 448
           PD  ++ S S+DG I LW          D RS SS +   +  S         S ++S A
Sbjct: 251 PDGSLLASGSSDGTIRLW----------DLRSSSSLLRTLSGHS---------SSVLSVA 291

Query: 449 YHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSD-VAAVNCVDFVDDGKYFLTGGAD 505
           + P    L + S++  +  W+   G ++ SL        V+ + F  DG   ++GG+D
Sbjct: 292 FSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSD 349

Length = 466

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 50.4 bits (121), Expect = 9e-07
 Identities = 27/112 (24%), Positives = 54/112 (48%), Gaps = 3/112 (2%)

Query: 81  DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVF 140
              ++S+ ++P   K+   + +  I L D+++G  L      H + +  + F  +   + 
Sbjct: 177 TGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLG-TLRGHENGVNSVAFSPD-GYLL 234

Query: 141 ATCSKND-IRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIR 191
           A+ S++  IR+W +RT   +  +S        + ++ DGK + SG  DG IR
Sbjct: 235 ASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIR 286

Length = 289

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 38.5 bits (90), Expect = 2e-04
 Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)

Query: 326 GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMW 364
           G ++R+L+G     V  V F  DG    +G  D  V++W
Sbjct: 1   GKLLRTLKGHT-GPVTSVAFSPDGNLLASGSDDGTVRVW 38

Length = 39

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 38.4 bits (90), Expect = 2e-04
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 325 DGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMW 364
            G ++++L+G     V  V F  DGKY  +G  D  +K+W
Sbjct: 1   SGELLKTLKGHT-GPVTSVAFSPDGKYLASGSDDGTIKLW 39

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 36.6 bits (85), Expect = 0.001
 Identities = 13/31 (41%), Positives = 18/31 (58%)

Query: 207 AHNRGVTALAITQDGTRLLSGGGEGQVRIWK 237
            H   VT++A + DG  L SG  +G VR+W 
Sbjct: 9   GHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39

Length = 39

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 36.2 bits (84), Expect = 0.001
 Identities = 12/38 (31%), Positives = 18/38 (47%)

Query: 369 GVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLW 406
           G       GH   +T +  SPD  ++ S S DG + +W
Sbjct: 1   GKLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVW 38

Length = 39

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 36.5 bits (85), Expect = 0.001
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)

Query: 197 SGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWK 237
           SG+L   +   H   VT++A + DG  L SG  +G +++W 
Sbjct: 1   SGELLKTL-KGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 35.8 bits (83), Expect = 0.002
 Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%)

Query: 473 GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKI 510
           G ++R+L+G     V  V F  DG    +G  D  V++
Sbjct: 1   GKLLRTLKGHT-GPVTSVAFSPDGNLLASGSDDGTVRV 37

Length = 39

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 35.8 bits (83), Expect = 0.002
 Identities = 14/30 (46%), Positives = 17/30 (56%)

Query: 377 GHAASITKIKISPDKKVIVSVSADGGIFLW 406
           GH   +T +  SPD K + S S DG I LW
Sbjct: 10  GHTGPVTSVAFSPDGKYLASGSDDGTIKLW 39

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 35.8 bits (83), Expect = 0.002
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 472 DGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKI 510
            G ++++L+G     V  V F  DGKY  +G  D  +K+
Sbjct: 1   SGELLKTLKGHT-GPVTSVAFSPDGKYLASGSDDGTIKL 38

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	515
KOG0271|consensus	480		100.0
KOG0291|consensus	893		100.0
KOG0271|consensus	480		100.0
KOG0318|consensus	603		100.0
KOG0319|consensus	775		100.0
KOG0318|consensus	603		100.0
KOG0319|consensus	775		100.0
KOG0306|consensus	888		100.0
KOG0291|consensus	893		100.0
KOG0306|consensus	888		100.0
KOG0272|consensus	459		100.0
KOG0272|consensus	459		100.0
KOG0315|consensus	311		100.0
KOG0286|consensus	343		100.0
KOG0286|consensus	343		100.0
KOG0279|consensus	315		100.0
KOG0279|consensus	315		100.0
KOG0296|consensus	399		100.0
KOG0273|consensus	524		100.0
KOG0296|consensus	399		100.0
KOG0273|consensus	524		100.0
KOG1539|consensus	910		100.0
KOG1408|consensus	1080		100.0
KOG2106|consensus	626		100.0
KOG0315|consensus	311		100.0
KOG0276|consensus	794		100.0
KOG0295|consensus	406		100.0
KOG0292|consensus	1202		100.0
KOG0645|consensus	312		100.0
KOG0265|consensus	338		100.0
KOG0284|consensus	464		100.0
KOG0284|consensus	464		100.0
KOG1539|consensus	910		100.0
KOG0293|consensus	519		100.0
KOG0265|consensus	338		100.0
KOG0276|consensus	794		100.0
KOG0645|consensus	312		100.0
KOG0263|consensus	707		100.0
KOG0285|consensus	460		100.0
KOG0295|consensus	406		100.0
KOG0263|consensus	707		100.0
KOG0278|consensus	334		100.0
KOG0285|consensus	460		100.0
KOG2106|consensus	626		100.0
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	100.0
KOG1063|consensus	764		100.0
KOG0266|consensus	456		100.0
KOG0316|consensus	307		100.0
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	100.0
KOG0293|consensus	519		100.0
KOG0282|consensus	503		100.0
KOG0266|consensus	456		100.0
KOG0292|consensus	1202		100.0
KOG0282|consensus	503		100.0
KOG1063|consensus	764		100.0
KOG2048|consensus	691		100.0
KOG0643|consensus	327		100.0
KOG0643|consensus	327		100.0
PLN00181	793	protein SPA1-RELATED; Provisional	100.0
PLN00181	793	protein SPA1-RELATED; Provisional	100.0
KOG1407|consensus	313		100.0
KOG0278|consensus	334		100.0
KOG2048|consensus	691		100.0
KOG0275|consensus	508		100.0
KOG0313|consensus	423		100.0
KOG1408|consensus	1080		100.0
KOG0281|consensus	499		100.0
KOG0316|consensus	307		100.0
KOG1407|consensus	313		100.0
KOG0275|consensus	508		100.0
KOG0281|consensus	499		100.0
KOG0640|consensus	430		100.0
KOG1446|consensus	311		100.0
KOG0313|consensus	423		100.0
KOG1446|consensus	311		100.0
KOG0274|consensus	537		100.0
KOG0310|consensus	487		100.0
KOG0305|consensus	484		100.0
KOG0289|consensus	506		100.0
KOG0288|consensus	459		100.0
KOG0310|consensus	487		100.0
KOG0288|consensus	459		100.0
KOG0640|consensus	430		100.0
KOG0305|consensus	484		100.0
KOG0277|consensus	311		100.0
KOG0772|consensus	641		100.0
KOG0308|consensus	735		100.0
KOG0772|consensus	641		100.0
KOG0268|consensus	433		100.0
KOG0973|consensus	942		100.0
KOG0277|consensus	311		100.0
KOG0299|consensus	479		100.0
KOG1445|consensus	1012		100.0
KOG0647|consensus	347		100.0
KOG0283|consensus	712		100.0
PTZ00421	493	coronin; Provisional	100.0
KOG0294|consensus	362		100.0
KOG0268|consensus	433		100.0
KOG0308|consensus	735		100.0
KOG2096|consensus	420		100.0
KOG0973|consensus	942		100.0
KOG0289|consensus	506		100.0
KOG2096|consensus	420		100.0
KOG0646|consensus	476		100.0
KOG0274|consensus	537		100.0
KOG0647|consensus	347		100.0
KOG0300|consensus	481		100.0
PTZ00421	493	coronin; Provisional	100.0
KOG0283|consensus	712		100.0
KOG0641|consensus	350		100.0
KOG0299|consensus	479		99.98
KOG0641|consensus	350		99.98
PTZ00420	568	coronin; Provisional	99.97
KOG1036|consensus	323		99.97
KOG0294|consensus	362		99.97
KOG2055|consensus	514		99.97
KOG1036|consensus	323		99.97
PTZ00420	568	coronin; Provisional	99.97
KOG1273|consensus	405		99.97
KOG2055|consensus	514		99.97
KOG0301|consensus	745		99.97
KOG1332|consensus	299		99.97
KOG1445|consensus	1012		99.97
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.97
KOG4283|consensus	397		99.97
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.97
KOG0639|consensus	705		99.97
KOG4283|consensus	397		99.97
KOG0646|consensus	476		99.97
KOG0639|consensus	705		99.97
KOG4328|consensus	498		99.97
KOG1963|consensus	792		99.96
KOG1273|consensus	405		99.96
KOG0300|consensus	481		99.96
KOG0301|consensus	745		99.96
KOG1963|consensus	792		99.96
KOG1274|consensus	933		99.96
KOG1538|consensus	1081		99.96
KOG1332|consensus	299		99.96
KOG0264|consensus	422		99.96
KOG0650|consensus	733		99.96
KOG0264|consensus	422		99.95
KOG1274|consensus	933		99.95
KOG0650|consensus	733		99.95
KOG0269|consensus	839		99.95
COG2319	466	FOG: WD40 repeat [General function prediction only	99.95
COG2319	466	FOG: WD40 repeat [General function prediction only	99.95
KOG4328|consensus	498		99.95
KOG0321|consensus	720		99.94
KOG1538|consensus	1081		99.94
KOG2445|consensus	361		99.94
KOG0267|consensus	825		99.94
KOG0321|consensus	720		99.94
KOG0267|consensus	825		99.94
KOG1034|consensus	385		99.94
KOG2919|consensus	406		99.93
KOG0269|consensus	839		99.93
KOG4378|consensus	673		99.93
KOG4378|consensus	673		99.93
KOG1009|consensus	434		99.93
KOG2445|consensus	361		99.93
KOG0270|consensus	463		99.93
KOG4497|consensus	447		99.93
KOG0270|consensus	463		99.92
KOG2919|consensus	406		99.92
KOG1034|consensus	385		99.91
KOG1009|consensus	434		99.91
KOG0302|consensus	440		99.91
KOG0302|consensus	440		99.91
KOG1188|consensus	376		99.9
KOG1188|consensus	376		99.9
KOG0322|consensus	323		99.9
KOG0307|consensus	1049		99.89
KOG0303|consensus	472		99.89
PRK11028	330	6-phosphogluconolactonase; Provisional	99.89
PRK11028	330	6-phosphogluconolactonase; Provisional	99.89
KOG0322|consensus	323		99.89
KOG1007|consensus	370		99.88
KOG4497|consensus	447		99.88
KOG4227|consensus	609		99.88
KOG0649|consensus	325		99.88
KOG4227|consensus	609		99.88
KOG0307|consensus	1049		99.87
KOG1524|consensus	737		99.87
KOG1524|consensus	737		99.87
KOG2110|consensus	391		99.87
KOG0642|consensus	577		99.87
KOG0642|consensus	577		99.87
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.87
KOG2110|consensus	391		99.87
KOG1310|consensus	758		99.87
KOG1523|consensus	361		99.86
KOG0290|consensus	364		99.86
KOG1007|consensus	370		99.86
KOG0649|consensus	325		99.85
KOG1517|consensus	1387		99.85
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.85
KOG1523|consensus	361		99.85
KOG0644|consensus	1113		99.85
KOG1587|consensus	555		99.85
KOG0644|consensus	1113		99.85
KOG1517|consensus	1387		99.84
KOG0771|consensus	398		99.84
KOG1587|consensus	555		99.84
KOG0771|consensus	398		99.84
KOG2139|consensus	445		99.83
KOG0303|consensus	472		99.83
KOG1240|consensus	1431		99.83
KOG1240|consensus	1431		99.83
PRK01742	429	tolB translocation protein TolB; Provisional	99.82
KOG1334|consensus	559		99.82
KOG0290|consensus	364		99.82
KOG1912|consensus	1062		99.81
PRK01742	429	tolB translocation protein TolB; Provisional	99.81
KOG1334|consensus	559		99.8
KOG2315|consensus	566		99.8
KOG1272|consensus	545		99.79
KOG2111|consensus	346		99.79
KOG2321|consensus	703		99.79
KOG2321|consensus	703		99.78
KOG2111|consensus	346		99.78
KOG0974|consensus	967		99.78
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	99.78
KOG2139|consensus	445		99.78
KOG1272|consensus	545		99.77
KOG0974|consensus	967		99.77
KOG1912|consensus	1062		99.77
COG4946	668	Uncharacterized protein related to the periplasmic	99.76
KOG2315|consensus	566		99.76
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	99.75
PRK03629	429	tolB translocation protein TolB; Provisional	99.75
KOG2314|consensus	698		99.75
PRK03629	429	tolB translocation protein TolB; Provisional	99.74
PRK02889	427	tolB translocation protein TolB; Provisional	99.74
KOG2041|consensus	1189		99.74
KOG1310|consensus	758		99.73
KOG2314|consensus	698		99.73
KOG1409|consensus	404		99.73
KOG1354|consensus	433		99.73
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	99.73
PRK05137	435	tolB translocation protein TolB; Provisional	99.73
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	99.72
KOG1409|consensus	404		99.72
KOG2394|consensus	636		99.72
PRK04922	433	tolB translocation protein TolB; Provisional	99.72
KOG3881|consensus	412		99.72
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	99.72
PRK04922	433	tolB translocation protein TolB; Provisional	99.71
PRK02889	427	tolB translocation protein TolB; Provisional	99.71
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	99.71
PRK05137	435	tolB translocation protein TolB; Provisional	99.71
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	99.7
KOG3881|consensus	412		99.69
KOG2394|consensus	636		99.69
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.68
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.67
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	99.65
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	99.64
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	99.61
KOG2041|consensus	1189		99.61
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.61
PRK01029	428	tolB translocation protein TolB; Provisional	99.61
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.6
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	99.6
PRK00178	430	tolB translocation protein TolB; Provisional	99.6
KOG1354|consensus	433		99.59
PRK04792	448	tolB translocation protein TolB; Provisional	99.59
COG4946	668	Uncharacterized protein related to the periplasmic	99.58
PRK04792	448	tolB translocation protein TolB; Provisional	99.58
PRK00178	430	tolB translocation protein TolB; Provisional	99.58
PRK01029	428	tolB translocation protein TolB; Provisional	99.57
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	99.56
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	99.48
KOG0280|consensus	339		99.47
KOG4547|consensus	541		99.46
KOG4547|consensus	541		99.45
KOG1064|consensus	2439		99.43
KOG0280|consensus	339		99.4
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.38
KOG1064|consensus	2439		99.38
KOG0309|consensus	1081		99.36
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	99.35
KOG4190|consensus	1034		99.35
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.34
KOG4190|consensus	1034		99.34
PRK04043	419	tolB translocation protein TolB; Provisional	99.33
PRK02888	635	nitrous-oxide reductase; Validated	99.33
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	99.31
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	99.29
PRK04043	419	tolB translocation protein TolB; Provisional	99.26
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	99.26
KOG4532|consensus	344		99.25
KOG4532|consensus	344		99.23
KOG0882|consensus	558		99.23
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	99.22
KOG4649|consensus	354		99.2
KOG0882|consensus	558		99.2
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	99.2
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	99.19
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	99.18
PRK02888	635	nitrous-oxide reductase; Validated	99.17
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	99.16
KOG3914|consensus	390		99.16
KOG0309|consensus	1081		99.15
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	99.15
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	99.15
KOG4714|consensus	319		99.15
KOG4714|consensus	319		99.12
KOG4649|consensus	354		99.11
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	99.11
KOG1832|consensus	1516		99.1
KOG1920|consensus	1265		99.07
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	99.07
KOG3914|consensus	390		99.05
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	99.04
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	99.0
KOG1275|consensus	1118		99.0
KOG1920|consensus	1265		98.97
KOG3617|consensus	1416		98.92
KOG1897|consensus	1096		98.92
KOG1645|consensus	463		98.9
KOG2066|consensus	846		98.89
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	98.88
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	98.88
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	98.88
KOG3617|consensus	1416		98.87
KOG3621|consensus	726		98.86
KOG1832|consensus	1516		98.85
KOG1645|consensus	463		98.84
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	98.84
KOG1275|consensus	1118		98.83
KOG2114|consensus	933		98.82
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	98.81
KOG2114|consensus	933		98.81
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	98.8
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	98.79
KOG2695|consensus	425		98.78
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	98.77
KOG2695|consensus	425		98.73
KOG2066|consensus	846		98.71
KOG1897|consensus	1096		98.7
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	98.69
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	98.66
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	98.64
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	98.61
KOG3621|consensus	726		98.59
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	98.59
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	98.59
COG3391	381	Uncharacterized conserved protein [Function unknow	98.58
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	98.57
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	98.55
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	98.55
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	98.54
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	98.51
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	98.5
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	98.49
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	98.47
KOG1008|consensus	783		98.43
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	98.43
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	98.41
COG3391	381	Uncharacterized conserved protein [Function unknow	98.4
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	98.39
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	98.34
KOG1008|consensus	783		98.31
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	98.25
PRK13616	591	lipoprotein LpqB; Provisional	98.14
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	98.11
KOG4499|consensus	310		98.07
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	98.03
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	98.03
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	98.01
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	98.0
KOG4640|consensus	665		97.97
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	97.91
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	97.91
PRK13616	591	lipoprotein LpqB; Provisional	97.86
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	97.85
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	97.82
KOG2395|consensus	644		97.8
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	97.76
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	97.73
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	97.73
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	97.71
PHA02713	557	hypothetical protein; Provisional	97.7
KOG4499|consensus	310		97.68
KOG4640|consensus	665		97.67
COG5276	370	Uncharacterized conserved protein [Function unknow	97.65
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	97.65
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	97.58
KOG4441|consensus	571		97.57
COG5276	370	Uncharacterized conserved protein [Function unknow	97.57
PHA02713	557	hypothetical protein; Provisional	97.57
KOG2444|consensus	238		97.54
KOG1898|consensus	1205		97.51
KOG2079|consensus	1206		97.49
PRK10115	686	protease 2; Provisional	97.49
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	97.48
KOG2444|consensus	238		97.39
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	97.36
KOG4441|consensus	571		97.33
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	97.32
KOG2395|consensus	644		97.3
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	97.3
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	97.27
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	97.26
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	97.26
COG3292	671	Predicted periplasmic ligand-binding sensor domain	97.22
KOG2280|consensus	829		97.13
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	97.09
COG3292	671	Predicted periplasmic ligand-binding sensor domain	97.03
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	97.03
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	96.99
PRK10115	686	protease 2; Provisional	96.98
KOG2079|consensus	1206		96.93
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	96.93
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	96.87
PF14727	418	PHTB1_N: PTHB1 N-terminus	96.8
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	96.74
PHA03098	534	kelch-like protein; Provisional	96.72
PF14727	418	PHTB1_N: PTHB1 N-terminus	96.71
KOG3630|consensus	1405		96.54
KOG3630|consensus	1405		96.52
PHA03098	534	kelch-like protein; Provisional	96.46
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	96.46
TIGR03118	336	PEPCTERM_chp_1 conserved hypothetical protein TIGR	96.45
PHA02790	480	Kelch-like protein; Provisional	96.43
PRK13684	334	Ycf48-like protein; Provisional	96.41
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	96.38
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	96.38
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	96.27
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	96.25
COG4590	733	ABC-type uncharacterized transport system, permeas	96.14
TIGR03118	336	PEPCTERM_chp_1 conserved hypothetical protein TIGR	96.07
COG5167	776	VID27 Protein involved in vacuole import and degra	95.85
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	95.8
PHA02790	480	Kelch-like protein; Provisional	95.78
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	95.71
KOG2280|consensus	829		95.68
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	95.66
KOG2377|consensus	657		95.55
PRK13684	334	Ycf48-like protein; Provisional	95.54
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	95.53
PF10433	504	MMS1_N: Mono-functional DNA-alkylating methyl meth	95.46
COG4590	733	ABC-type uncharacterized transport system, permeas	95.37
KOG1896|consensus	1366		95.29
smart00036	302	CNH Domain found in NIK1-like kinases, mouse citro	95.23
PF10433	504	MMS1_N: Mono-functional DNA-alkylating methyl meth	95.19
KOG1916|consensus	1283		95.11
PF11635	753	Med16: Mediator complex subunit 16; InterPro: IPR0	95.05
COG4257	353	Vgb Streptogramin lyase [Defense mechanisms]	94.81
PLN00033	398	photosystem II stability/assembly factor; Provisio	94.78
PF14781	136	BBS2_N: Ciliary BBSome complex subunit 2, N-termin	94.77
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	94.76
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	94.7
COG5167	776	VID27 Protein involved in vacuole import and degra	94.68
COG5290	1243	IkappaB kinase complex, IKAP component [Transcript	94.5
KOG1916|consensus	1283		94.49
COG3823	262	Glutamine cyclotransferase [Posttranslational modi	94.48
KOG3616|consensus	1636		94.46
KOG1983|consensus	993		94.42
KOG2247|consensus	615		94.23
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	94.1
TIGR03548	323	mutarot_permut cyclically-permuted mutatrotase fam	93.97
KOG1898|consensus	1205		93.92
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	93.87
PF13449	326	Phytase-like: Esterase-like activity of phytase	93.85
KOG3616|consensus	1636		93.84
KOG2247|consensus	615		93.76
PF14781	136	BBS2_N: Ciliary BBSome complex subunit 2, N-termin	93.75
KOG2377|consensus	657		93.7
PF07250	243	Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP	93.57
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	93.35
PF13449	326	Phytase-like: Esterase-like activity of phytase	93.23
TIGR03547	346	muta_rot_YjhT mutatrotase, YjhT family. Members of	93.16
PF02333	381	Phytase: Phytase; InterPro: IPR003431 Phytase (3.1	93.11
KOG4460|consensus	741		92.83
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	92.53
KOG1983|consensus	993		92.52
PF02333	381	Phytase: Phytase; InterPro: IPR003431 Phytase (3.1	92.52
PRK14131	376	N-acetylneuraminic acid mutarotase; Provisional	92.44
COG3823	262	Glutamine cyclotransferase [Posttranslational modi	92.34
COG4257	353	Vgb Streptogramin lyase [Defense mechanisms]	92.26
PF11715	547	Nup160: Nucleoporin Nup120/160; InterPro: IPR02171	92.12
COG1520	370	FOG: WD40-like repeat [Function unknown]	92.1
KOG1900|consensus	1311		92.1
PRK14131	376	N-acetylneuraminic acid mutarotase; Provisional	91.99
PLN02153	341	epithiospecifier protein	91.69
TIGR03547	346	muta_rot_YjhT mutatrotase, YjhT family. Members of	91.67
TIGR03548	323	mutarot_permut cyclically-permuted mutatrotase fam	91.59
TIGR02276	42	beta_rpt_yvtn 40-residue YVTN family beta-propelle	91.52
PF11725	1774	AvrE: Pathogenicity factor; InterPro: IPR021085 Th	91.28
PF12657	173	TFIIIC_delta: Transcription factor IIIC subunit de	91.12
PF12768	281	Rax2: Cortical protein marker for cell polarity	90.69
COG5290	1243	IkappaB kinase complex, IKAP component [Transcript	90.59
PRK13613	599	lipoprotein LpqB; Provisional	90.59
KOG1900|consensus	1311		90.32
TIGR02276	42	beta_rpt_yvtn 40-residue YVTN family beta-propelle	89.28
PLN00033	398	photosystem II stability/assembly factor; Provisio	89.12
PLN02193	470	nitrile-specifier protein	88.98
PF12657	173	TFIIIC_delta: Transcription factor IIIC subunit de	88.94

>KOG0271|consensus

Probab=100.00  E-value=3.2e-58  Score=379.11  Aligned_cols=361  Identities=23%  Similarity=0.328  Sum_probs=303.8

Q ss_pred             eeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCC
Q psy17610        119 VNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSG  198 (515)
Q Consensus       119 ~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~  198 (515)
                      .+.||.++|.|++|+|+|+.|++++.|.++|+||+.+..++.+.++|...|.|++|+|||+.||+|+.||+|++||.++|
T Consensus       110 S~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg  189 (480)
T KOG0271|consen  110 SIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTG  189 (480)
T ss_pred             ccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCC
Confidence            46789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceEEEecCCCCCCeEEEEEcC-----CCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeC
Q psy17610        199 KLKFIIPNAHNRGVTALAITQ-----DGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST  273 (515)
Q Consensus       199 ~~~~~~~~~~~~~v~~~~~~~-----~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  273 (515)
                      +++.....+|...|++++|.|     ..++|++++.||.++|||+  .....+..+.+|+.+|+|+.|-.+ .++++++.
T Consensus       190 ~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~--~~~~~~~~lsgHT~~VTCvrwGG~-gliySgS~  266 (480)
T KOG0271|consen  190 QQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDT--KLGTCVRTLSGHTASVTCVRWGGE-GLIYSGSQ  266 (480)
T ss_pred             CcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEc--cCceEEEEeccCccceEEEEEcCC-ceEEecCC
Confidence            998877789999999999976     5679999999999999999  456678889999999999999765 58999999


Q ss_pred             CCcEEEEEcccceEEEEEEcCc-cEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCc--cEEEEEEcCCCC
Q psy17610        274 DGTCVLWDLIKSTRLIIMILPS-MIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVA--AVNCVDFVDDGK  350 (515)
Q Consensus       274 d~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~--~i~~~~~~~~~~  350 (515)
                      |++|++|+...+.....+..+. .|+.++.+.+-- |=+|..+.        ++............  .-.....-..+.
T Consensus       267 DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~-LRtgaf~~--------t~~~~~~~se~~~~Al~rY~~~~~~~~e  337 (480)
T KOG0271|consen  267 DRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYV-LRTGAFDH--------TGRKPKSFSEEQKKALERYEAVLKDSGE  337 (480)
T ss_pred             CceEEEEEccchhHHHhhcccchheeeeeccchhh-hhcccccc--------ccccCCChHHHHHHHHHHHHHhhccCcc
Confidence            9999999999998888876654 688887765421 11121111        11111111000000  000011222457


Q ss_pred             EEEEEcCCCeEEEEEccC-CeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeeccc
Q psy17610        351 YFLTGGADQIVKMWMYRE-GVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRST  429 (515)
Q Consensus       351 ~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~  429 (515)
                      .|++|+.|.++.+|+... .+++....+|..-|+.+.||||++++|+++-|..|++|+..+++.                
T Consensus       338 rlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~----------------  401 (480)
T KOG0271|consen  338 RLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGKF----------------  401 (480)
T ss_pred             eeEEecCCceEEEecccccccchhhhhchhhheeeEEECCCccEEEEeecccceeeeeCCCcch----------------
Confidence            899999999999999755 458888999999999999999999999999999999999887642                


Q ss_pred             ccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEE
Q psy17610        430 ARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVK  509 (515)
Q Consensus       430 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~  509 (515)
                          ...+.+|-..|..++|+.|.++|++|+.|.++++||+.+.++...+.+|. ..|.++.|+|||+.+++|+.|..++
T Consensus       402 ----lasfRGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~tkKl~~DLpGh~-DEVf~vDwspDG~rV~sggkdkv~~  476 (480)
T KOG0271|consen  402 ----LASFRGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVRTKKLKQDLPGHA-DEVFAVDWSPDGQRVASGGKDKVLR  476 (480)
T ss_pred             ----hhhhhhccceeEEEEeccCccEEEEcCCCceEEEEEeeeeeecccCCCCC-ceEEEEEecCCCceeecCCCceEEE
Confidence                23345677889999999999999999999999999999999999999998 9999999999999999999999999


Q ss_pred             EEE
Q psy17610        510 ICL  512 (515)
Q Consensus       510 iw~  512 (515)
                      +|.
T Consensus       477 lw~  479 (480)
T KOG0271|consen  477 LWR  479 (480)
T ss_pred             eec
Confidence            995

>KOG0291|consensus

Probab=100.00  E-value=1.2e-54  Score=388.07  Aligned_cols=490  Identities=15%  Similarity=0.268  Sum_probs=415.8

Q ss_pred             CccCCCCceEEEecCCCCeEEEEcCCCCCCcccccccc--eEEeeccccccccccccccccccCcceee--eccceEEEE
Q psy17610          1 MKTTPNDEFAYCGTTSGDILKLNLNYPSDLSKVESDTA--AVLMGCYGKLIKKKVSTKLKDVNAEDVSL--YSAGVTALY   76 (515)
Q Consensus         1 ~~~~~~~~~~~~g~~~g~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~   76 (515)
                      +++||+|.+|++....|.....++....++-.+....+  .+-....++++.....+-+.+|..+....  |..-+....
T Consensus        61 ialSp~g~lllavdE~g~~~lvs~~~r~Vlh~f~fk~~v~~i~fSPng~~fav~~gn~lqiw~~P~~~~~~~~pFvl~r~  140 (893)
T KOG0291|consen   61 IALSPDGTLLLAVDERGRALLVSLLSRSVLHRFNFKRGVGAIKFSPNGKFFAVGCGNLLQIWHAPGEIKNEFNPFVLHRT  140 (893)
T ss_pred             EEeCCCceEEEEEcCCCcEEEEecccceeeEEEeecCccceEEECCCCcEEEEEecceeEEEecCcchhcccCcceEeee
Confidence            46899999999999999999999887766655555433  22222334566667777888887776544  555566777


Q ss_pred             EecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCce-eEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCC
Q psy17610         77 LLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFT-LTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRT  155 (515)
Q Consensus        77 ~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~  155 (515)
                      ..+|...|+++.|+.|.++|++|+.|-..++|.++..+. ....+.+|.++|.+.-|..+...+++.+.||.+.+|....
T Consensus       141 ~~g~fddi~si~Ws~DSr~l~~gsrD~s~rl~~v~~~k~~~~~~l~gHkd~VvacfF~~~~~~l~tvskdG~l~~W~~~~  220 (893)
T KOG0291|consen  141 YLGHFDDITSIDWSDDSRLLVTGSRDLSARLFGVDGNKNLFTYALNGHKDYVVACFFGANSLDLYTVSKDGALFVWTCDL  220 (893)
T ss_pred             ecCCccceeEEEeccCCceEEeccccceEEEEEeccccccceEeccCCCcceEEEEeccCcceEEEEecCceEEEEEecC
Confidence            889999999999999999999999999999999986443 2446788999999999999999999999999999998761


Q ss_pred             -----------------------Cce-----e------EEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceE
Q psy17610        156 -----------------------LNE-----L------LRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLK  201 (515)
Q Consensus       156 -----------------------~~~-----~------~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~  201 (515)
                                             +++     .      .-+......+++.+|++..+.|+++-..|...+|.+....++
T Consensus       221 ~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH~~t~~lvvgFssG~f~LyelP~f~li  300 (893)
T KOG0291|consen  221 RPPELDKAEKDEEGSDDEEMDEDGEEKTHKIFWYKTKKHYLNQNSSKVTAAAFHKGTNLLVVGFSSGEFGLYELPDFNLI  300 (893)
T ss_pred             CCcccccccccccccccccccccchhhhcceEEEEEEeeeecccccceeeeeccCCceEEEEEecCCeeEEEecCCceEE
Confidence                                   111     0      001122367999999999999999999999999999999999


Q ss_pred             EEecCCCCCCeEEEEEcCCCCEEEEecCC-CcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEE
Q psy17610        202 FIIPNAHNRGVTALAITQDGTRLLSGGGE-GQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLW  280 (515)
Q Consensus       202 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw  280 (515)
                      +.+ .-.+.+|..++|+..|.+|+.|+.. |++.+|+.  .....+...++|...+.+++++|||+++++|++||.|++|
T Consensus       301 h~L-Sis~~~I~t~~~N~tGDWiA~g~~klgQLlVweW--qsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvW  377 (893)
T KOG0291|consen  301 HSL-SISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEW--QSESYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVW  377 (893)
T ss_pred             EEe-ecccceeeEEEecccCCEEEEcCCccceEEEEEe--eccceeeeccccccceeeEEECCCCcEEEeccCCCcEEEE
Confidence            888 4566889999999999999998764 89999999  4566777789999999999999999999999999999999


Q ss_pred             EcccceEEEEEEcC-ccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCC
Q psy17610        281 DLIKSTRLIIMILP-SMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQ  359 (515)
Q Consensus       281 d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg  359 (515)
                      |..++-+..++..+ +.++.+.|+..++.+++.+.||+++.||+...+..+++..+.+....|++..|.|.++.+|+.|.
T Consensus       378 n~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~  457 (893)
T KOG0291|consen  378 NTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDS  457 (893)
T ss_pred             eccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEeeccce
Confidence            99999999988655 58999999999999999999999999999999999999999888889999999999999999886


Q ss_pred             -eEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeee
Q psy17610        360 -IVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIM  438 (515)
Q Consensus       360 -~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  438 (515)
                       .|.+|++++|+.+..+.+|+++|.+++|+|++..|++++.|.+|++||+-....                    .....
T Consensus       458 F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~--------------------~vEtl  517 (893)
T KOG0291|consen  458 FEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSG--------------------TVETL  517 (893)
T ss_pred             EEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeeccCc--------------------eeeeE
Confidence             599999999999999999999999999999999999999999999999865421                    11122


Q ss_pred             cCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeeccc-------------------ccceEEEEEEcCCCcEE
Q psy17610        439 ILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGS-------------------DVAAVNCVDFVDDGKYF  499 (515)
Q Consensus       439 ~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~-------------------~~~~v~~~~~s~~~~~l  499 (515)
                      .+...+..++|+|+|+.||+++-||.|.+||.+.+.....+++.                   .....+.+++|+||.++
T Consensus       518 ~i~sdvl~vsfrPdG~elaVaTldgqItf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~sa~~K~Ftti~ySaDG~~I  597 (893)
T KOG0291|consen  518 EIRSDVLAVSFRPDGKELAVATLDGQITFFDIKEAVQVGSIDGRKDLSGGRKETDRITAENSAKGKTFTTICYSADGKCI  597 (893)
T ss_pred             eeccceeEEEEcCCCCeEEEEEecceEEEEEhhhceeeccccchhhccccccccceeehhhcccCCceEEEEEcCCCCEE
Confidence            23455899999999999999999999999999887666554432                   12568899999999999


Q ss_pred             EEeecCCeEEEEEE
Q psy17610        500 LTGGADQIVKICLY  513 (515)
Q Consensus       500 ~s~~~dg~v~iw~~  513 (515)
                      ++||....|.+|+.
T Consensus       598 lAgG~sn~iCiY~v  611 (893)
T KOG0291|consen  598 LAGGESNSICIYDV  611 (893)
T ss_pred             EecCCcccEEEEEC
Confidence            99999999999984

>KOG0271|consensus

Probab=100.00  E-value=1.1e-57  Score=376.01  Aligned_cols=327  Identities=20%  Similarity=0.343  Sum_probs=299.0

Q ss_pred             EEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCC
Q psy17610         75 LYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVR  154 (515)
Q Consensus        75 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~  154 (515)
                      -.+.+|.++|.|++|+|+|.+||+|+.|.++++||+.+ +....+.++|...|.|++|+|||+.|++++.||+|++||.+
T Consensus       109 sS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~T-eTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpk  187 (480)
T KOG0271|consen  109 SSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDT-ETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPK  187 (480)
T ss_pred             cccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCC-CCcceeecCCccEEEEEEECCCcchhhccccCCeEEEecCC
Confidence            45679999999999999999999999999999999999 67788889999999999999999999999999999999999


Q ss_pred             CCcee-EEEEecCeEEEEEEEee-----CCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEec
Q psy17610        155 TLNEL-LRISVMNMICACIVFTY-----DGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGG  228 (515)
Q Consensus       155 ~~~~~-~~~~~~~~~v~~~~~~~-----~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  228 (515)
                      +|+++ ..+.+|...|++++|.|     ..++|++++.||.++|||+..+.++..+ .+|..+|+|+.|--+| ++++|+
T Consensus       188 tg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~l-sgHT~~VTCvrwGG~g-liySgS  265 (480)
T KOG0271|consen  188 TGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTL-SGHTASVTCVRWGGEG-LIYSGS  265 (480)
T ss_pred             CCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEe-ccCccceEEEEEcCCc-eEEecC
Confidence            98875 56889999999999976     5679999999999999999999999888 7999999999998655 899999


Q ss_pred             CCCcEEEEEccCCceeeEEeeccccCceEEEEEec-----------CC-------------------------CEEEEEe
Q psy17610        229 GEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKS-----------DS-------------------------KEAMSAS  272 (515)
Q Consensus       229 ~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~-----------~~-------------------------~~l~~~~  272 (515)
                      .|++|++|+..  .+.+...+++|...|+.++.+.           .+                         +.+++++
T Consensus       266 ~DrtIkvw~a~--dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgs  343 (480)
T KOG0271|consen  266 QDRTIKVWRAL--DGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGS  343 (480)
T ss_pred             CCceEEEEEcc--chhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEec
Confidence            99999999984  4677888999999999998772           22                         4599999


Q ss_pred             CCCcEEEEEcccce-EEEEE-EcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCC
Q psy17610        273 TDGTCVLWDLIKST-RLIIM-ILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGK  350 (515)
Q Consensus       273 ~d~~i~iwd~~~~~-~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~  350 (515)
                      .|.++.+|+....+ ++..+ .+...+..+.|+||++++++++.|..|++||.++|+.+..+.+|- ..|..++|+.|.+
T Consensus       344 Dd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRGHv-~~VYqvawsaDsR  422 (480)
T KOG0271|consen  344 DDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASFRGHV-AAVYQVAWSADSR  422 (480)
T ss_pred             CCceEEEecccccccchhhhhchhhheeeEEECCCccEEEEeecccceeeeeCCCcchhhhhhhcc-ceeEEEEeccCcc
Confidence            99999999976543 44333 445579999999999999999999999999999999999999987 8999999999999


Q ss_pred             EEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEe
Q psy17610        351 YFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWT  407 (515)
Q Consensus       351 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~  407 (515)
                      +|++|+.|.++++|++++.+....+.+|...|.++.|+|||..+++++.|..+++|.
T Consensus       423 LlVS~SkDsTLKvw~V~tkKl~~DLpGh~DEVf~vDwspDG~rV~sggkdkv~~lw~  479 (480)
T KOG0271|consen  423 LLVSGSKDSTLKVWDVRTKKLKQDLPGHADEVFAVDWSPDGQRVASGGKDKVLRLWR  479 (480)
T ss_pred             EEEEcCCCceEEEEEeeeeeecccCCCCCceEEEEEecCCCceeecCCCceEEEeec
Confidence            999999999999999999999999999999999999999999999999999999995

>KOG0318|consensus

Probab=100.00  E-value=2.7e-54  Score=370.32  Aligned_cols=480  Identities=17%  Similarity=0.179  Sum_probs=378.6

Q ss_pred             ccCCCCceEEEecCCCCeEEEEcCCCCCCcccccccceEEeecc---------ccccccccccccccccCcceeeeccce
Q psy17610          2 KTTPNDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMGCY---------GKLIKKKVSTKLKDVNAEDVSLYSAGV   72 (515)
Q Consensus         2 ~~~~~~~~~~~g~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (515)
                      .|+|.|.|+++|..+|.|.+||......+.+   .+..++.+.-         +|+......+    .+...+-+|+.|-
T Consensus        66 kySPsG~yiASGD~sG~vRIWdtt~~~hiLK---nef~v~aG~I~Di~Wd~ds~RI~avGEGr----erfg~~F~~DSG~  138 (603)
T KOG0318|consen   66 KYSPSGFYIASGDVSGKVRIWDTTQKEHILK---NEFQVLAGPIKDISWDFDSKRIAAVGEGR----ERFGHVFLWDSGN  138 (603)
T ss_pred             EeCCCceEEeecCCcCcEEEEeccCcceeee---eeeeecccccccceeCCCCcEEEEEecCc----cceeEEEEecCCC
Confidence            5899999999999999999999775322222   2223333321         2222111000    1122334556666


Q ss_pred             EEEEEecCCCcEEEEEEecCCC-EEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEE
Q psy17610         73 TALYLLKDDSGISSLQYNPVNN-KVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIW  151 (515)
Q Consensus        73 ~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw  151 (515)
                      ..-.+.+|...|++++|-|... ++++|+.|+.|.+|+-.. .+.......|..-|.|+.|+|||.++++++.||++.+|
T Consensus       139 SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPP-FKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iy  217 (603)
T KOG0318|consen  139 SVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPP-FKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIY  217 (603)
T ss_pred             ccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCC-eeeeecccccccceeeEEECCCCCeEEEecCCccEEEE
Confidence            7778899999999999999765 689999999999999876 77777888899999999999999999999999999999


Q ss_pred             eCCCCceeEEEE---ecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCC--CCeEEEEEcCCCCEEEE
Q psy17610        152 SVRTLNELLRIS---VMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHN--RGVTALAITQDGTRLLS  226 (515)
Q Consensus       152 ~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~  226 (515)
                      |=.+++.+..+.   +|++.|.+++|+||++.+++++.|.++++||+.+.+++.++..+..  ..-..+-|.  ...|++
T Consensus       218 DGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWq--kd~lIt  295 (603)
T KOG0318|consen  218 DGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQ--KDHLIT  295 (603)
T ss_pred             cCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEe--CCeEEE
Confidence            999999999998   8999999999999999999999999999999999999988865544  333445554  557999


Q ss_pred             ecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEE--EcCccEEEEEEcC
Q psy17610        227 GGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIM--ILPSMIMSAAYHP  304 (515)
Q Consensus       227 ~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~  304 (515)
                      .+.+|.|.+++....  .....+.+|...|+++..+|++++|++++.||.|.-|+..++..-+..  .+...|.+++.+.
T Consensus       296 VSl~G~in~ln~~d~--~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~  373 (603)
T KOG0318|consen  296 VSLSGTINYLNPSDP--SVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASE  373 (603)
T ss_pred             EEcCcEEEEecccCC--ChhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCCccccccccccccceEEEEeecC
Confidence            999999999999544  477889999999999999999999999999999999999887765543  3445677777665


Q ss_pred             CCcEEEEEECCCeEEEEeCCCCc------------e-------------------EEEEe-------cCCCccEEEEEEc
Q psy17610        305 SEVQLITCSTNKMIDYWETCDGS------------I-------------------IRSLE-------GSDVAAVNCVDFV  346 (515)
Q Consensus       305 ~~~~l~~~~~~~~i~~~d~~~~~------------~-------------------~~~~~-------~~~~~~i~~~~~~  346 (515)
                      .+. +++.+.|.++++.++....            +                   +..+.       .+-.....+++++
T Consensus       374 ~~~-~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~  452 (603)
T KOG0318|consen  374 SGE-LFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVS  452 (603)
T ss_pred             CCc-EEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEc
Confidence            443 4555667777777542211            0                   00000       0112456789999


Q ss_pred             CCCCEEEEEcCCCeEEEEEccCCee--eeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCccccee
Q psy17610        347 DDGKYFLTGGADQIVKMWMYREGVP--CFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSK  424 (515)
Q Consensus       347 ~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~  424 (515)
                      |+++.+++|++|+.+++|.+..+..  ...+..|.++|+++++|||+.+||++...+.+.+||+.+.+.           
T Consensus       453 ~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~-----------  521 (603)
T KOG0318|consen  453 PDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREV-----------  521 (603)
T ss_pred             CCCCEEEEecccceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEEEeccCCcEEEEEcccCce-----------
Confidence            9999999999999999999977543  345678999999999999999999999999999999987642           


Q ss_pred             eecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeec
Q psy17610        425 ISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA  504 (515)
Q Consensus       425 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~  504 (515)
                              .......|...|.+++|+|+..++|+|+-|-.|.||+++.......+.+.|...|+.+.|-. ...|++.+.
T Consensus       522 --------~~~~w~FHtakI~~~aWsP~n~~vATGSlDt~Viiysv~kP~~~i~iknAH~~gVn~v~wld-e~tvvSsG~  592 (603)
T KOG0318|consen  522 --------KTNRWAFHTAKINCVAWSPNNKLVATGSLDTNVIIYSVKKPAKHIIIKNAHLGGVNSVAWLD-ESTVVSSGQ  592 (603)
T ss_pred             --------ecceeeeeeeeEEEEEeCCCceEEEeccccceEEEEEccChhhheEeccccccCceeEEEec-CceEEeccC
Confidence                    11123347788999999999999999999999999999887655555655557799999984 456899999


Q ss_pred             CCeEEEEEEe
Q psy17610        505 DQIVKICLYI  514 (515)
Q Consensus       505 dg~v~iw~~~  514 (515)
                      |..|++|++.
T Consensus       593 Da~iK~W~v~  602 (603)
T KOG0318|consen  593 DANIKVWNVT  602 (603)
T ss_pred             cceeEEeccc
Confidence            9999999863

>KOG0319|consensus

Probab=100.00  E-value=6.4e-56  Score=395.43  Aligned_cols=481  Identities=17%  Similarity=0.246  Sum_probs=400.5

Q ss_pred             CccCCCCceEEEecCCCCeEEEEcCCCCCCccccc-ccceEE-ee---ccccccccccccccccccCcceeeeccceEEE
Q psy17610          1 MKTTPNDEFAYCGTTSGDILKLNLNYPSDLSKVES-DTAAVL-MG---CYGKLIKKKVSTKLKDVNAEDVSLYSAGVTAL   75 (515)
Q Consensus         1 ~~~~~~~~~~~~g~~~g~i~~~~~~~~~~~~~~~~-~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (515)
                      ++++||+++|+++..++.+.+|++.++++++.+.. ++.+++ +.   +...+-.+.....+++|+.      ..+....
T Consensus        68 ~~l~~d~~~L~~a~rs~llrv~~L~tgk~irswKa~He~Pvi~ma~~~~g~LlAtggaD~~v~VWdi------~~~~~th  141 (775)
T KOG0319|consen   68 LALTPDEEVLVTASRSQLLRVWSLPTGKLIRSWKAIHEAPVITMAFDPTGTLLATGGADGRVKVWDI------KNGYCTH  141 (775)
T ss_pred             eeecCCccEEEEeeccceEEEEEcccchHhHhHhhccCCCeEEEEEcCCCceEEeccccceEEEEEe------eCCEEEE
Confidence            46889999999999999999999999999999999 554433 32   3455556788899999997      4567788


Q ss_pred             EEecCCCcEEEEEEecCCC--EEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeC
Q psy17610         76 YLLKDDSGISSLQYNPVNN--KVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSV  153 (515)
Q Consensus        76 ~~~~~~~~v~~~~~s~~~~--~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~  153 (515)
                      .+.+|++.|.++.|+|+-+  .|++|..|+.+++||+.+......+...|.+.|++++|++|+..+++++.|..+.|||+
T Consensus       142 ~fkG~gGvVssl~F~~~~~~~lL~sg~~D~~v~vwnl~~~~tcl~~~~~H~S~vtsL~~~~d~~~~ls~~RDkvi~vwd~  221 (775)
T KOG0319|consen  142 SFKGHGGVVSSLLFHPHWNRWLLASGATDGTVRVWNLNDKRTCLHTMILHKSAVTSLAFSEDSLELLSVGRDKVIIVWDL  221 (775)
T ss_pred             EecCCCceEEEEEeCCccchhheeecCCCceEEEEEcccCchHHHHHHhhhhheeeeeeccCCceEEEeccCcEEEEeeh
Confidence            9999999999999999654  58899999999999999765545667789999999999999999999999999999999


Q ss_pred             CCCceeEEEEecCeEEEEEEEeeC-----CCEEEEEeCCCeEEEEecCCCceEEEec-----------------------
Q psy17610        154 RTLNELLRISVMNMICACIVFTYD-----GKAILSGWNDGFIRCFTPQSGKLKFIIP-----------------------  205 (515)
Q Consensus       154 ~~~~~~~~~~~~~~~v~~~~~~~~-----~~~l~~~~~dg~i~~~~~~~~~~~~~~~-----------------------  205 (515)
                      .+.+.++.+.. ...+.++.+-++     +.++++++.+|.+++||.+++++.....                       
T Consensus       222 ~~~~~l~~lp~-ye~~E~vv~l~~~~~~~~~~~~TaG~~g~~~~~d~es~~~~~~~~~~~~~e~~~~~~~~~~~~~l~vt  300 (775)
T KOG0319|consen  222 VQYKKLKTLPL-YESLESVVRLREELGGKGEYIITAGGSGVVQYWDSESGKCVYKQRQSDSEEIDHLLAIESMSQLLLVT  300 (775)
T ss_pred             hhhhhhheech-hhheeeEEEechhcCCcceEEEEecCCceEEEEecccchhhhhhccCCchhhhcceeccccCceEEEE
Confidence            87777666653 334566677666     6699999999999999987664322110                       


Q ss_pred             -------------------CCCCCCeEEEEE-cCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCC
Q psy17610        206 -------------------NAHNRGVTALAI-TQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDS  265 (515)
Q Consensus       206 -------------------~~~~~~v~~~~~-~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  265 (515)
                                         .+..+.|..++| .|+.+++++++..+.+++|+..+.  . ...+.+|...|.++....+|
T Consensus       301 aeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~--~-c~ii~GH~e~vlSL~~~~~g  377 (775)
T KOG0319|consen  301 AEQNLFLYDEDELTIVKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTS--Y-CQIIPGHTEAVLSLDVWSSG  377 (775)
T ss_pred             ccceEEEEEccccEEehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecCCC--c-eEEEeCchhheeeeeecccC
Confidence                               134466777777 456789999999999999987432  2 33789999999999977788


Q ss_pred             CEEEEEeCCCcEEEEEcccceEEEE-----EEcCccEEEEEEcCCC-cEEEEEECCCeEEEEeCCCCceEE---EE----
Q psy17610        266 KEAMSASTDGTCVLWDLIKSTRLII-----MILPSMIMSAAYHPSE-VQLITCSTNKMIDYWETCDGSIIR---SL----  332 (515)
Q Consensus       266 ~~l~~~~~d~~i~iwd~~~~~~~~~-----~~~~~~~~~~~~~~~~-~~l~~~~~~~~i~~~d~~~~~~~~---~~----  332 (515)
                      .+|++++.|.++++|.++++.....     ..+...+.+++++..+ ..|++++.|.++++|++...+...   .+    
T Consensus       378 ~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~  457 (775)
T KOG0319|consen  378 DLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRY  457 (775)
T ss_pred             cEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhH
Confidence            8999999999999998854433221     2344578888887654 578899999999999997732211   11    


Q ss_pred             -ecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCC
Q psy17610        333 -EGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPEL  411 (515)
Q Consensus       333 -~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  411 (515)
                       ...|...|+|++++|+.+++|+|+.|.+.+||+++......++.+|...|.++.|+|..+.++|+|.|++|+||.+.+.
T Consensus       458 t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~f  537 (775)
T KOG0319|consen  458 TERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTF  537 (775)
T ss_pred             HHHhhcccccceEecCCCceEEecccccceeeecccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccc
Confidence             1234478999999999999999999999999999999999999999999999999999999999999999999999875


Q ss_pred             cCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEE
Q psy17610        412 EDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVD  491 (515)
Q Consensus       412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~  491 (515)
                      .                    ....+.+|...|..+.|-.+|..|++++.||.+++|++++++++.++..|. ..|++++
T Consensus       538 S--------------------ClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt~eC~~tlD~H~-DrvWaL~  596 (775)
T KOG0319|consen  538 S--------------------CLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNECEMTLDAHN-DRVWALS  596 (775)
T ss_pred             e--------------------eeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEeccchhhhhhhhhcc-ceeEEEe
Confidence            3                    344566788889999999999999999999999999999999999999998 9999999


Q ss_pred             EcCCCcEEEEeecCCeEEEEE
Q psy17610        492 FVDDGKYFLTGGADQIVKICL  512 (515)
Q Consensus       492 ~s~~~~~l~s~~~dg~v~iw~  512 (515)
                      -+|++.+++||+.||.|.+|.
T Consensus       597 ~~~~~~~~~tgg~Dg~i~~wk  617 (775)
T KOG0319|consen  597 VSPLLDMFVTGGGDGRIIFWK  617 (775)
T ss_pred             ecCccceeEecCCCeEEEEee
Confidence            999999999999999999995

>KOG0318|consensus

Probab=100.00  E-value=1.2e-52  Score=360.16  Aligned_cols=415  Identities=19%  Similarity=0.287  Sum_probs=342.3

Q ss_pred             EEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCC-CceeEEeeccCccCeEEEEeCCCCcEEEEEec--CCcEEEEe
Q psy17610         76 YLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNS-GFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS--KNDIRIWS  152 (515)
Q Consensus        76 ~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~--d~~i~iw~  152 (515)
                      ...+|..+++-..|||.|.|+|+|...|+|+|||... ...+...++.-.++|..++|++|++++++.+.  ++-.+++-
T Consensus        54 iYtEH~~~vtVAkySPsG~yiASGD~sG~vRIWdtt~~~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGEGrerfg~~F~  133 (603)
T KOG0318|consen   54 IYTEHAHQVTVAKYSPSGFYIASGDVSGKVRIWDTTQKEHILKNEFQVLAGPIKDISWDFDSKRIAAVGEGRERFGHVFL  133 (603)
T ss_pred             eeccccceeEEEEeCCCceEEeecCCcCcEEEEeccCcceeeeeeeeecccccccceeCCCCcEEEEEecCccceeEEEE
Confidence            3446999999999999999999999999999999876 33445566667899999999999999999987  33344444


Q ss_pred             CCCCceeEEEEecCeEEEEEEEeeCCC-EEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCC
Q psy17610        153 VRTLNELLRISVMNMICACIVFTYDGK-AILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEG  231 (515)
Q Consensus       153 ~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~  231 (515)
                      .++|..+-.+.+|...|.++.|-|... +++++++|+.|.+|+-...+....+ ..|..-|.++.|+|||.++++++.||
T Consensus       134 ~DSG~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~-r~HskFV~~VRysPDG~~Fat~gsDg  212 (603)
T KOG0318|consen  134 WDSGNSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSF-REHSKFVNCVRYSPDGSRFATAGSDG  212 (603)
T ss_pred             ecCCCccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecc-cccccceeeEEECCCCCeEEEecCCc
Confidence            457888999999999999999999775 6889999999999987777777666 68999999999999999999999999


Q ss_pred             cEEEEEccCCceeeEEeec---cccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCcc----EEEEEEcC
Q psy17610        232 QVRIWKLTRESQSLQCVLK---EHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSM----IMSAAYHP  304 (515)
Q Consensus       232 ~i~iw~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~----~~~~~~~~  304 (515)
                      .+.+||=.  +.+.+..+.   +|.+.|.+++|+||++.+++++.|.++++||+.+.+.+.++.....    ...+.|. 
T Consensus       213 ki~iyDGk--tge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWq-  289 (603)
T KOG0318|consen  213 KIYIYDGK--TGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQ-  289 (603)
T ss_pred             cEEEEcCC--CccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEe-
Confidence            99999974  444555555   8999999999999999999999999999999999999998877654    3344444 


Q ss_pred             CCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeec-cCCCCCe-
Q psy17610        305 SEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVG-IGHAASI-  382 (515)
Q Consensus       305 ~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~i-  382 (515)
                       ...|++.+.+|.|.+++.....++..+.+|. ..|+++..+|++++|++|+.||.|.-|+..++..-... ..|...| 
T Consensus       290 -kd~lItVSl~G~in~ln~~d~~~~~~i~GHn-K~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~  367 (603)
T KOG0318|consen  290 -KDHLITVSLSGTINYLNPSDPSVLKVISGHN-KSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIK  367 (603)
T ss_pred             -CCeEEEEEcCcEEEEecccCCChhheecccc-cceeEEEEcCCCCEEEeeccCceEEEEecCCccccccccccccceEE
Confidence             7789999999999999999999888998887 89999999999999999999999999998755322111 2222222 


Q ss_pred             -------------------------------------------------------------------------------e
Q psy17610        383 -------------------------------------------------------------------------------T  383 (515)
Q Consensus       383 -------------------------------------------------------------------------------~  383 (515)
                                                                                                     .
T Consensus       368 ~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s  447 (603)
T KOG0318|consen  368 GMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESS  447 (603)
T ss_pred             EEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccc
Confidence                                                                                           3


Q ss_pred             EEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCC
Q psy17610        384 KIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNK  463 (515)
Q Consensus       384 ~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg  463 (515)
                      +++++|++..++.|+.|+.+++|.+...+.                  ........|...|+.+++|||+.+||+++..+
T Consensus       448 ~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l------------------~ee~~~~~h~a~iT~vaySpd~~yla~~Da~r  509 (603)
T KOG0318|consen  448 AVAVSPDGSEVAVGGQDGKVHVYSLSGDEL------------------KEEAKLLEHRAAITDVAYSPDGAYLAAGDASR  509 (603)
T ss_pred             eEEEcCCCCEEEEecccceEEEEEecCCcc------------------cceeeeecccCCceEEEECCCCcEEEEeccCC
Confidence            556666666666666666666666654331                  11223445778899999999999999999999


Q ss_pred             eEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEEEEEEe
Q psy17610        464 MIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLYI  514 (515)
Q Consensus       464 ~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~  514 (515)
                      .+.+||+.+.+.......-|.+.|.+++|+|+..++|||+-|-+|.||++-
T Consensus       510 kvv~yd~~s~~~~~~~w~FHtakI~~~aWsP~n~~vATGSlDt~Viiysv~  560 (603)
T KOG0318|consen  510 KVVLYDVASREVKTNRWAFHTAKINCVAWSPNNKLVATGSLDTNVIIYSVK  560 (603)
T ss_pred             cEEEEEcccCceecceeeeeeeeEEEEEeCCCceEEEeccccceEEEEEcc
Confidence            999999999887555444334999999999999999999999999999863

>KOG0319|consensus

Probab=100.00  E-value=3.1e-53  Score=378.29  Aligned_cols=482  Identities=17%  Similarity=0.274  Sum_probs=391.6

Q ss_pred             CccCCCCceEEEecCCCCeEEEEcCCCCC-Ccccccccc-----eEEeeccccccccccccccccccCcceeeeccceEE
Q psy17610          1 MKTTPNDEFAYCGTTSGDILKLNLNYPSD-LSKVESDTA-----AVLMGCYGKLIKKKVSTKLKDVNAEDVSLYSAGVTA   74 (515)
Q Consensus         1 ~~~~~~~~~~~~g~~~g~i~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (515)
                      ++++++|+.|||...+ .|.+.|..++.. +...+....     ..+.+....+....+..-+++|..++.++..     
T Consensus        25 ~~~s~nG~~L~t~~~d-~Vi~idv~t~~~~l~s~~~ed~d~ita~~l~~d~~~L~~a~rs~llrv~~L~tgk~ir-----   98 (775)
T KOG0319|consen   25 VAWSSNGQHLYTACGD-RVIIIDVATGSIALPSGSNEDEDEITALALTPDEEVLVTASRSQLLRVWSLPTGKLIR-----   98 (775)
T ss_pred             eeECCCCCEEEEecCc-eEEEEEccCCceecccCCccchhhhheeeecCCccEEEEeeccceEEEEEcccchHhH-----
Confidence            4689999999996443 478888887766 444444321     2334456777778888888888887654322     


Q ss_pred             EEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcE--EEEEecCCcEEEEe
Q psy17610         75 LYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSS--VFATCSKNDIRIWS  152 (515)
Q Consensus        75 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~--l~~~~~d~~i~iw~  152 (515)
                      ..-..|.+||.-++|+|.+..||+|+.||.+++||+..+ .....+.||.+.|.++.|+|+-.+  |+++..|+.+++||
T Consensus        99 swKa~He~Pvi~ma~~~~g~LlAtggaD~~v~VWdi~~~-~~th~fkG~gGvVssl~F~~~~~~~lL~sg~~D~~v~vwn  177 (775)
T KOG0319|consen   99 SWKAIHEAPVITMAFDPTGTLLATGGADGRVKVWDIKNG-YCTHSFKGHGGVVSSLLFHPHWNRWLLASGATDGTVRVWN  177 (775)
T ss_pred             hHhhccCCCeEEEEEcCCCceEEeccccceEEEEEeeCC-EEEEEecCCCceEEEEEeCCccchhheeecCCCceEEEEE
Confidence            122249999999999999999999999999999999985 566678899999999999997543  67777799999999


Q ss_pred             CCCCce-eEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCC-----CCEEEE
Q psy17610        153 VRTLNE-LLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQD-----GTRLLS  226 (515)
Q Consensus       153 ~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~~~l~~  226 (515)
                      +.+... +..+..|...|++++|++|+..++++++|..+.+||+.+-+....+  +-...+.++.+-++     +.++++
T Consensus       178 l~~~~tcl~~~~~H~S~vtsL~~~~d~~~~ls~~RDkvi~vwd~~~~~~l~~l--p~ye~~E~vv~l~~~~~~~~~~~~T  255 (775)
T KOG0319|consen  178 LNDKRTCLHTMILHKSAVTSLAFSEDSLELLSVGRDKVIIVWDLVQYKKLKTL--PLYESLESVVRLREELGGKGEYIIT  255 (775)
T ss_pred             cccCchHHHHHHhhhhheeeeeeccCCceEEEeccCcEEEEeehhhhhhhhee--chhhheeeEEEechhcCCcceEEEE
Confidence            996554 7788899999999999999999999999999999999777766665  34556777777776     679999


Q ss_pred             ecCCCcEEEEEccCCc-----------------------------------------eeeEEeeccccCceEEEEE-ecC
Q psy17610        227 GGGEGQVRIWKLTRES-----------------------------------------QSLQCVLKEHTSSVSVIQI-KSD  264 (515)
Q Consensus       227 ~~~d~~i~iw~~~~~~-----------------------------------------~~~~~~~~~~~~~v~~~~~-~~~  264 (515)
                      ++.+|.+++||.....                                         ......+-|..+.|..++| .|+
T Consensus       256 aG~~g~~~~~d~es~~~~~~~~~~~~~e~~~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~e  335 (775)
T KOG0319|consen  256 AGGSGVVQYWDSESGKCVYKQRQSDSEEIDHLLAIESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYNDEILDMKFLGPE  335 (775)
T ss_pred             ecCCceEEEEecccchhhhhhccCCchhhhcceeccccCceEEEEccceEEEEEccccEEehhhcCCchhheeeeecCCc
Confidence            9999999999975211                                         0111123355677888877 467


Q ss_pred             CCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCc----eEEEEecCCCccE
Q psy17610        265 SKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGS----IIRSLEGSDVAAV  340 (515)
Q Consensus       265 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~----~~~~~~~~~~~~i  340 (515)
                      .++++.++..+.+++++..+..+.....+...+.++....+|.++++++.|.++++|.++.+.    ++....+|. ..|
T Consensus       336 ~~~laVATNs~~lr~y~~~~~~c~ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~-~sv  414 (775)
T KOG0319|consen  336 ESHLAVATNSPELRLYTLPTSYCQIIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHT-NSV  414 (775)
T ss_pred             cceEEEEeCCCceEEEecCCCceEEEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCcchhhhhhhhcccc-ccc
Confidence            789999999999999999988888555666689999977888999999999999999774432    334444554 889


Q ss_pred             EEEEEcCCC-CEEEEEcCCCeEEEEEccCCee-----e----eeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCC
Q psy17610        341 NCVDFVDDG-KYFLTGGADQIVKMWMYREGVP-----C----FVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPE  410 (515)
Q Consensus       341 ~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~-----~----~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~  410 (515)
                      .+++++..+ .+|++++.|+++++|++...+.     .    .....|...|++++++|+.+++||||.|.+.+||+++.
T Consensus       415 gava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~  494 (775)
T KOG0319|consen  415 GAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQ  494 (775)
T ss_pred             ceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecccccceeeecccC
Confidence            999997744 5889999999999999976221     1    12357999999999999999999999999999999874


Q ss_pred             CcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEE
Q psy17610        411 LEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCV  490 (515)
Q Consensus       411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~  490 (515)
                      .                    .....+.+|...+.++.|+|..+.+|++|.|++|+||.+.+..++++++||. ..|..+
T Consensus       495 ~--------------------~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~-~aVlra  553 (775)
T KOG0319|consen  495 L--------------------RLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHT-SAVLRA  553 (775)
T ss_pred             c--------------------eEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCcc-ceeEee
Confidence            3                    2234567888999999999999999999999999999999999999999998 999999


Q ss_pred             EEcCCCcEEEEeecCCeEEEEEE
Q psy17610        491 DFVDDGKYFLTGGADQIVKICLY  513 (515)
Q Consensus       491 ~~s~~~~~l~s~~~dg~v~iw~~  513 (515)
                      .|-.+|+.|++++.||.+++|+.
T Consensus       554 ~F~~~~~qliS~~adGliKlWni  576 (775)
T KOG0319|consen  554 SFIRNGKQLISAGADGLIKLWNI  576 (775)
T ss_pred             eeeeCCcEEEeccCCCcEEEEec
Confidence            99999999999999999999985

>KOG0306|consensus

Probab=100.00  E-value=8.5e-52  Score=369.61  Aligned_cols=470  Identities=17%  Similarity=0.255  Sum_probs=389.5

Q ss_pred             CCceEEEecCCCCeEEEEcCCCCCCcccccc-cc-eEEe--eccccc--cccccccccccccCcceeeeccceEEEEEec
Q psy17610          6 NDEFAYCGTTSGDILKLNLNYPSDLSKVESD-TA-AVLM--GCYGKL--IKKKVSTKLKDVNAEDVSLYSAGVTALYLLK   79 (515)
Q Consensus         6 ~~~~~~~g~~~g~i~~~~~~~~~~~~~~~~~-~~-~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (515)
                      .|+++++ +...+|.+||+.+++....+... .. .+.+  .+...+  ..+..++.+++|+....      ...+.+.+
T Consensus        33 ~Gr~va~-~a~E~vn~WdlRtge~~~~l~~~~~k~evt~l~~~~d~l~lAVGYaDGsVqif~~~s~------~~~~tfng  105 (888)
T KOG0306|consen   33 KGRAVAV-SALEQVNIWDLRTGEIEKKLILLKKKAEVTCLRSSDDILLLAVGYADGSVQIFSLESE------EILITFNG  105 (888)
T ss_pred             CCcEEEE-eccccEeEEeeecchhhhhhhhhcccceEEEeeccCCcceEEEEecCceEEeeccCCC------ceeeeecc
Confidence            3554444 57789999999998554444332 11 1221  222222  44666777777776432      45677889


Q ss_pred             CCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCcee
Q psy17610         80 DDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNEL  159 (515)
Q Consensus        80 ~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~  159 (515)
                      |...|+++.|+..|.+||+|+.|+.|.+||+-. +.-...+.||.+.|+..-|..+.+.+++++.|+.|++||+++..+.
T Consensus       106 HK~AVt~l~fd~~G~rlaSGskDt~IIvwDlV~-E~Gl~rL~GHkd~iT~~~F~~~~~~lvS~sKDs~iK~WdL~tqhCf  184 (888)
T KOG0306|consen  106 HKAAVTTLKFDKIGTRLASGSKDTDIIVWDLVG-EEGLFRLRGHKDSITQALFLNGDSFLVSVSKDSMIKFWDLETQHCF  184 (888)
T ss_pred             cccceEEEEEcccCceEeecCCCccEEEEEecc-ceeeEEeecchHHHhHHhccCCCeEEEEeccCceEEEEecccceee
Confidence            999999999999999999999999999999987 5666778899999999999997789999999999999999999999


Q ss_pred             EEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCC------------------------CceEEEe-----------
Q psy17610        160 LRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQS------------------------GKLKFII-----------  204 (515)
Q Consensus       160 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~------------------------~~~~~~~-----------  204 (515)
                      .+.-.|.+.+..+++.+  +.+++++.|+.+++|++..                        ++.+...           
T Consensus       185 ~Thvd~r~Eiw~l~~~~--~~lvt~~~dse~~v~~L~~~~D~~~~~~~~s~~~~G~~~rqsk~R~i~l~~d~s~r~~~c~  262 (888)
T KOG0306|consen  185 ETHVDHRGEIWALVLDE--KLLVTAGTDSELKVWELAFEDDEKETNRYISTKLRGTFIRQSKGREINLVTDFSDRFLVCQ  262 (888)
T ss_pred             eEEecccceEEEEEEec--ceEEEEecCCceEEEEeecccccccccccceeeccceeeeccCCceeEEeecCcccEEEEe
Confidence            99999999999999987  6899999999999998710                        0000000           


Q ss_pred             --------------------------------------------------------------------------------
Q psy17610        205 --------------------------------------------------------------------------------  204 (515)
Q Consensus       205 --------------------------------------------------------------------------------  204 (515)
                                                                                                      
T Consensus       263 g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka~t~e~~~~v~~sl~~~i~r~~~ir~~~kiks~dv~~~~~~~~~lv~l~  342 (888)
T KOG0306|consen  263 GADKVIELFRIRSKEEIAKILSKKLKRAKKKAETEENEDDVEKSLSDEIKRLETIRTSAKIKSFDVTPSGGTENTLVLLA  342 (888)
T ss_pred             cchhhhhheeecCHHHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHheechhheeEEEEEecCCcceeEEEee
Confidence                                                                                            


Q ss_pred             --------------------------cCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEE
Q psy17610        205 --------------------------PNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSV  258 (515)
Q Consensus       205 --------------------------~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~  258 (515)
                                                ..+|...|.+++++.+...+++|+. +.+++|+.  .+.+++.++..  +.+.+
T Consensus       343 nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRsl~vS~d~~~~~Sga~-~SikiWn~--~t~kciRTi~~--~y~l~  417 (888)
T KOG0306|consen  343 NNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVRSLCVSSDSILLASGAG-ESIKIWNR--DTLKCIRTITC--GYILA  417 (888)
T ss_pred             cCceEEEEeccCCCCCccccccceeeeccchhheeEEEeecCceeeeecCC-CcEEEEEc--cCcceeEEecc--ccEEE
Confidence                                      0067788999999988777776654 78999998  44566666653  37889


Q ss_pred             EEEecCCCEEEEEeCCCcEEEEEcccceEEEEEE-cCccEEEEEEcCCCcEEEEEECCCeEEEEeCCC-----CceE---
Q psy17610        259 IQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMI-LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCD-----GSII---  329 (515)
Q Consensus       259 ~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~-----~~~~---  329 (515)
                      ..|-|.++++++|...|.+.++|+.+...+..+. +.+.+.+++..||+..+++++.|.++++||..-     +...   
T Consensus       418 ~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~l  497 (888)
T KOG0306|consen  418 SKFVPGDRYIVLGTKNGELQVFDLASASLVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVL  497 (888)
T ss_pred             EEecCCCceEEEeccCCceEEEEeehhhhhhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceee
Confidence            9999999999999999999999999888777665 556899999999999999999999999998632     2111   


Q ss_pred             -----EEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEE
Q psy17610        330 -----RSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIF  404 (515)
Q Consensus       330 -----~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~  404 (515)
                           ++++..  ..+.|+.+||||++|+++--|++++||-+++.+....+.+|.-||.+|..+||+++++|||.|.+|+
T Consensus       498 sl~~~rtLel~--ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVK  575 (888)
T KOG0306|consen  498 SLKHTRTLELE--DDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVK  575 (888)
T ss_pred             eeccceEEecc--ccEEEEEEcCCCcEEEEEeccCeEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceE
Confidence                 222222  6799999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeeccccc
Q psy17610        405 LWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDV  484 (515)
Q Consensus       405 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~  484 (515)
                      +|-++-+                    .++..+..|+..|.++.|-|+...+++++.|+.|+-||-.+-+.++.+.+|+ 
T Consensus       576 iWGLdFG--------------------DCHKS~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~kFe~iq~L~~H~-  634 (888)
T KOG0306|consen  576 IWGLDFG--------------------DCHKSFFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEKFEEIQKLDGHH-  634 (888)
T ss_pred             Eeccccc--------------------hhhhhhhcccCceeEEEEcccceeEEEecCcceEEeechhhhhhheeeccch-
Confidence            9987654                    3345566788999999999999999999999999999999999999999999 


Q ss_pred             ceEEEEEEcCCCcEEEEeecCCeEEEEEE
Q psy17610        485 AAVNCVDFVDDGKYFLTGGADQIVKICLY  513 (515)
Q Consensus       485 ~~v~~~~~s~~~~~l~s~~~dg~v~iw~~  513 (515)
                      ..|+|++.+|+|.+++++|.|.+||+|.-
T Consensus       635 ~ev~cLav~~~G~~vvs~shD~sIRlwE~  663 (888)
T KOG0306|consen  635 SEVWCLAVSPNGSFVVSSSHDKSIRLWER  663 (888)
T ss_pred             heeeeeEEcCCCCeEEeccCCceeEeeec
Confidence            99999999999999999999999999963

>KOG0291|consensus

Probab=100.00  E-value=1.8e-50  Score=361.42  Aligned_cols=502  Identities=16%  Similarity=0.242  Sum_probs=394.2

Q ss_pred             CccCCCCceEEEecCCCCeEEEEcCCCCC--Cccccccc---------ceEEeeccccc-cccccccccccccCcceeee
Q psy17610          1 MKTTPNDEFAYCGTTSGDILKLNLNYPSD--LSKVESDT---------AAVLMGCYGKL-IKKKVSTKLKDVNAEDVSLY   68 (515)
Q Consensus         1 ~~~~~~~~~~~~g~~~g~i~~~~~~~~~~--~~~~~~~~---------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~   68 (515)
                      |.|||||+++++| ....+.+|...+...  +..+.-+.         ..+--....++ ..++.+-.++++.....+  
T Consensus       102 i~fSPng~~fav~-~gn~lqiw~~P~~~~~~~~pFvl~r~~~g~fddi~si~Ws~DSr~l~~gsrD~s~rl~~v~~~k--  178 (893)
T KOG0291|consen  102 IKFSPNGKFFAVG-CGNLLQIWHAPGEIKNEFNPFVLHRTYLGHFDDITSIDWSDDSRLLVTGSRDLSARLFGVDGNK--  178 (893)
T ss_pred             EEECCCCcEEEEE-ecceeEEEecCcchhcccCcceEeeeecCCccceeEEEeccCCceEEeccccceEEEEEecccc--
Confidence            5799999988886 445888998654322  11111110         01111122333 334666666776665443  


Q ss_pred             ccceEEEEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCC-----------------------Cce-----e----
Q psy17610         69 SAGVTALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNS-----------------------GFT-----L----  116 (515)
Q Consensus        69 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~-----------------------~~~-----~----  116 (515)
                        +.....+.+|.+.|.+.-|..+...+.+-+.||.+.+|....                       +++     .    
T Consensus       179 --~~~~~~l~gHkd~VvacfF~~~~~~l~tvskdG~l~~W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~  256 (893)
T KOG0291|consen  179 --NLFTYALNGHKDYVVACFFGANSLDLYTVSKDGALFVWTCDLRPPELDKAEKDEEGSDDEEMDEDGEEKTHKIFWYKT  256 (893)
T ss_pred             --ccceEeccCCCcceEEEEeccCcceEEEEecCceEEEEEecCCCcccccccccccccccccccccchhhhcceEEEEE
Confidence              355677889999999999999999999999999999998761                       111     0    


Q ss_pred             -EEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCC-CeEEEEe
Q psy17610        117 -TLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWND-GFIRCFT  194 (515)
Q Consensus       117 -~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g~i~~~~  194 (515)
                       ...+......|++.+|++....|+++-..|...++.+....+++.+.....+|..++|+..|++|+.|+.. |.+.+|+
T Consensus       257 ~k~~ln~~~~kvtaa~fH~~t~~lvvgFssG~f~LyelP~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVwe  336 (893)
T KOG0291|consen  257 KKHYLNQNSSKVTAAAFHKGTNLLVVGFSSGEFGLYELPDFNLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWE  336 (893)
T ss_pred             EeeeecccccceeeeeccCCceEEEEEecCCeeEEEecCCceEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEE
Confidence             11122233679999999998888888889999999999999999999999999999999999999988765 8999999


Q ss_pred             cCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCC
Q psy17610        195 PQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTD  274 (515)
Q Consensus       195 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  274 (515)
                      ..+...+.+. .+|...+++++++|||+++++|++||.|++||.  ...-+..++..|+..|+.+.|+..++.+++.+-|
T Consensus       337 WqsEsYVlKQ-QgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~--~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLD  413 (893)
T KOG0291|consen  337 WQSESYVLKQ-QGHSDRITSLAYSPDGQLIATGAEDGKVKVWNT--QSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLD  413 (893)
T ss_pred             eeccceeeec-cccccceeeEEECCCCcEEEeccCCCcEEEEec--cCceEEEEeccCCCceEEEEEEecCCEEEEeecC
Confidence            9998887776 799999999999999999999999999999998  5667888999999999999999999999999999


Q ss_pred             CcEEEEEcccceEEEEEEcCcc--EEEEEEcCCCcEEEEEECCC-eEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCE
Q psy17610        275 GTCVLWDLIKSTRLIIMILPSM--IMSAAYHPSEVQLITCSTNK-MIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKY  351 (515)
Q Consensus       275 ~~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~-~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  351 (515)
                      |+|+.||+...+..+++..|.+  ..+++..|.|..+.+|+.|. .|.+|++++|+.+..+.+|. ++|.+++|+|++..
T Consensus       414 GtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHE-gPVs~l~f~~~~~~  492 (893)
T KOG0291|consen  414 GTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHE-GPVSGLSFSPDGSL  492 (893)
T ss_pred             CeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCC-CcceeeEEccccCe
Confidence            9999999999999999988875  57888889999999998876 69999999999999999988 99999999999999


Q ss_pred             EEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeeccccc
Q psy17610        352 FLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTAR  431 (515)
Q Consensus       352 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~  431 (515)
                      |++++.|.+|++||+-......+-..+...+..++|+|+|+.|+++..||.|.+||...................+....
T Consensus       493 LaS~SWDkTVRiW~if~s~~~vEtl~i~sdvl~vsfrPdG~elaVaTldgqItf~d~~~~~q~~~IdgrkD~~~gR~~~D  572 (893)
T KOG0291|consen  493 LASGSWDKTVRIWDIFSSSGTVETLEIRSDVLAVSFRPDGKELAVATLDGQITFFDIKEAVQVGSIDGRKDLSGGRKETD  572 (893)
T ss_pred             EEeccccceEEEEEeeccCceeeeEeeccceeEEEEcCCCCeEEEEEecceEEEEEhhhceeeccccchhhccccccccc
Confidence            99999999999999866533333346778899999999999999999999999999886543211111111000000000


Q ss_pred             ccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeeccc-----------------------------
Q psy17610        432 STRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGS-----------------------------  482 (515)
Q Consensus       432 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~-----------------------------  482 (515)
                      ............++.+++|+||..+++|+....|++|++.++-+++.++-.                             
T Consensus       573 ~~ta~~sa~~K~Ftti~ySaDG~~IlAgG~sn~iCiY~v~~~vllkkfqiS~N~sLdg~~efln~rkmtEfG~~~LiD~e  652 (893)
T KOG0291|consen  573 RITAENSAKGKTFTTICYSADGKCILAGGESNSICIYDVPEGVLLKKFQISDNRSLDGVLEFLNRRKMTEFGNMDLIDTE  652 (893)
T ss_pred             eeehhhcccCCceEEEEEcCCCCEEEecCCcccEEEEECchhheeeeEEeccccchhHHHHHhccccccccCCccccccc
Confidence            011111223356999999999999999999999999999877666554310                             


Q ss_pred             --------------------------ccceEEEEEEcCCCcEEEEeecCCeEEEEE
Q psy17610        483 --------------------------DVAAVNCVDFVDDGKYFLTGGADQIVKICL  512 (515)
Q Consensus       483 --------------------------~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~  512 (515)
                                                ..-.|.++.|+|.|+.+|.++..| +.||.
T Consensus       653 ~~~~e~~i~~~lpG~~~gdlssRr~rpeIrv~sv~fsPtgraFAaatTEG-l~IYs  707 (893)
T KOG0291|consen  653 ESDLEGRIDIALPGVQRGDLSSRRFRPEIRVTSVQFSPTGRAFAAATTEG-LLIYS  707 (893)
T ss_pred             cccccccccccCCccccCCccccccCceEEEEEEEECCCcCeeeeecccc-eEEEe
Confidence                                      012478899999999999999998 66664

>KOG0306|consensus

Probab=100.00  E-value=9.2e-50  Score=356.65  Aligned_cols=434  Identities=18%  Similarity=0.280  Sum_probs=372.2

Q ss_pred             cccccccccccccccCcceeeeccceEEEEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccC
Q psy17610         47 KLIKKKVSTKLKDVNAEDVSLYSAGVTALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSA  126 (515)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~  126 (515)
                      +.+.....+.+..|+..+..+    ...+........|+|+.-+|+..+||+|..||.|+||+..++ .....+.||..+
T Consensus        35 r~va~~a~E~vn~WdlRtge~----~~~l~~~~~k~evt~l~~~~d~l~lAVGYaDGsVqif~~~s~-~~~~tfngHK~A  109 (888)
T KOG0306|consen   35 RAVAVSALEQVNIWDLRTGEI----EKKLILLKKKAEVTCLRSSDDILLLAVGYADGSVQIFSLESE-EILITFNGHKAA  109 (888)
T ss_pred             cEEEEeccccEeEEeeecchh----hhhhhhhcccceEEEeeccCCcceEEEEecCceEEeeccCCC-ceeeeecccccc
Confidence            444555566777788765522    122333344579999999999999999999999999999985 666778899999


Q ss_pred             eEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecC
Q psy17610        127 IYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPN  206 (515)
Q Consensus       127 v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~  206 (515)
                      |+.+.|...|..|++++.|+.|.+||+-...-+.++.+|++.|+.+-|..+.+.+++.+.|+.|++||+++..+..+. .
T Consensus       110 Vt~l~fd~~G~rlaSGskDt~IIvwDlV~E~Gl~rL~GHkd~iT~~~F~~~~~~lvS~sKDs~iK~WdL~tqhCf~Th-v  188 (888)
T KOG0306|consen  110 VTTLKFDKIGTRLASGSKDTDIIVWDLVGEEGLFRLRGHKDSITQALFLNGDSFLVSVSKDSMIKFWDLETQHCFETH-V  188 (888)
T ss_pred             eEEEEEcccCceEeecCCCccEEEEEeccceeeEEeecchHHHhHHhccCCCeEEEEeccCceEEEEecccceeeeEE-e
Confidence            999999999999999999999999999988889999999999999999988899999999999999999999998888 6


Q ss_pred             CCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCc----------------------ee--------------------
Q psy17610        207 AHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRES----------------------QS--------------------  244 (515)
Q Consensus       207 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~----------------------~~--------------------  244 (515)
                      .|...+..+++.+  +.+++++.|+.+++|++..+.                      ..                    
T Consensus       189 d~r~Eiw~l~~~~--~~lvt~~~dse~~v~~L~~~~D~~~~~~~~s~~~~G~~~rqsk~R~i~l~~d~s~r~~~c~g~d~  266 (888)
T KOG0306|consen  189 DHRGEIWALVLDE--KLLVTAGTDSELKVWELAFEDDEKETNRYISTKLRGTFIRQSKGREINLVTDFSDRFLVCQGADK  266 (888)
T ss_pred             cccceEEEEEEec--ceEEEEecCCceEEEEeecccccccccccceeeccceeeeccCCceeEEeecCcccEEEEecchh
Confidence            8999999999987  689999999999999982000                      00                    


Q ss_pred             --------------------------------------------------------------------------------
Q psy17610        245 --------------------------------------------------------------------------------  244 (515)
Q Consensus       245 --------------------------------------------------------------------------------  244 (515)
                                                                                                      
T Consensus       267 ~~e~frI~s~~E~~k~l~Kk~k~~Kkka~t~e~~~~v~~sl~~~i~r~~~ir~~~kiks~dv~~~~~~~~~lv~l~nNtv  346 (888)
T KOG0306|consen  267 VIELFRIRSKEEIAKILSKKLKRAKKKAETEENEDDVEKSLSDEIKRLETIRTSAKIKSFDVTPSGGTENTLVLLANNTV  346 (888)
T ss_pred             hhhheeecCHHHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHheechhheeEEEEEecCCcceeEEEeecCce
Confidence                                                                                            


Q ss_pred             ------------------eEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCC
Q psy17610        245 ------------------LQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSE  306 (515)
Q Consensus       245 ------------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  306 (515)
                                        ....+.+|...|.+++++.+...+++++ .+.+++|+..+.++++++... .+.+..|-|.+
T Consensus       347 ~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRsl~vS~d~~~~~Sga-~~SikiWn~~t~kciRTi~~~-y~l~~~Fvpgd  424 (888)
T KOG0306|consen  347 EWYSLENSGKTSPEADRTSNIEIGGHRSDVRSLCVSSDSILLASGA-GESIKIWNRDTLKCIRTITCG-YILASKFVPGD  424 (888)
T ss_pred             EEEEeccCCCCCccccccceeeeccchhheeEEEeecCceeeeecC-CCcEEEEEccCcceeEEeccc-cEEEEEecCCC
Confidence                              0013456888899999998876666655 468999999999999998777 78889999999


Q ss_pred             cEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccC-----Ceeeeec------
Q psy17610        307 VQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYRE-----GVPCFVG------  375 (515)
Q Consensus       307 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~-----~~~~~~~------  375 (515)
                      ++++.|..+|.+.+||+.+...+.+++.|. +.+..++.+||++.+++|+.|.+|++||..-     +.....+      
T Consensus       425 ~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHd-gaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~r  503 (888)
T KOG0306|consen  425 RYIVLGTKNGELQVFDLASASLVETIRAHD-GAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTR  503 (888)
T ss_pred             ceEEEeccCCceEEEEeehhhhhhhhhccc-cceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccce
Confidence            999999999999999999999999999766 9999999999999999999999999999742     1111111      


Q ss_pred             -cCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCc
Q psy17610        376 -IGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEV  454 (515)
Q Consensus       376 -~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~  454 (515)
                       ..-+..|.++.+|||+++|+++--|.++++|-+++..                    -...+.+|.-+|.++..|||++
T Consensus       504 tLel~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtlK--------------------FflsLYGHkLPV~smDIS~DSk  563 (888)
T KOG0306|consen  504 TLELEDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLK--------------------FFLSLYGHKLPVLSMDISPDSK  563 (888)
T ss_pred             EEeccccEEEEEEcCCCcEEEEEeccCeEEEEEeccee--------------------eeeeecccccceeEEeccCCcC
Confidence             1335689999999999999999999999999887643                    2345667888999999999999


Q ss_pred             EEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEEEEE
Q psy17610        455 QLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICL  512 (515)
Q Consensus       455 ~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~  512 (515)
                      .+++|+.|.+|++|-+.-|.+.+.+-+|. ..|.++.|.|+...+.++|.||.|+-||
T Consensus       564 livTgSADKnVKiWGLdFGDCHKS~fAHd-DSvm~V~F~P~~~~FFt~gKD~kvKqWD  620 (888)
T KOG0306|consen  564 LIVTGSADKNVKIWGLDFGDCHKSFFAHD-DSVMSVQFLPKTHLFFTCGKDGKVKQWD  620 (888)
T ss_pred             eEEeccCCCceEEeccccchhhhhhhccc-CceeEEEEcccceeEEEecCcceEEeec
Confidence            99999999999999999999999999998 9999999999999999999999999997

>KOG0272|consensus

Probab=100.00  E-value=2.3e-48  Score=325.14  Aligned_cols=282  Identities=22%  Similarity=0.318  Sum_probs=267.0

Q ss_pred             cCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeC--CCEEEEEeCCCeEEEEecCCCc
Q psy17610        122 CHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYD--GKAILSGWNDGFIRCFTPQSGK  199 (515)
Q Consensus       122 ~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~~~~~~~~~  199 (515)
                      +...+|..+.|++|++.|++++-+|.+++|+..+...+.++.+|...+.++.|+|.  +..+++++.||++++|++++..
T Consensus       173 gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~  252 (459)
T KOG0272|consen  173 GDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQET  252 (459)
T ss_pred             cCCCcceeeEeecCCCeEEEeecCCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCc
Confidence            56789999999999999999999999999999999999999999999999999997  5689999999999999999999


Q ss_pred             eEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEE
Q psy17610        200 LKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVL  279 (515)
Q Consensus       200 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i  279 (515)
                      ++..+ .+|...|..++|+|+|++|++++.|.+-++||+++  ........+|...|.+++|.+||.++++|+.|..-++
T Consensus       253 ~l~~l-~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~t--k~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~Rv  329 (459)
T KOG0272|consen  253 PLQDL-EGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLET--KSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRV  329 (459)
T ss_pred             chhhh-hcchhhheeeeecCCCceeeecccccchhhccccc--chhhHhhcccccccceeEecCCCceeeccCccchhhe
Confidence            88888 79999999999999999999999999999999954  4445567899999999999999999999999999999


Q ss_pred             EEcccceEEEEEEcC-ccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcC-CCCEEEEEcC
Q psy17610        280 WDLIKSTRLIIMILP-SMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVD-DGKYFLTGGA  357 (515)
Q Consensus       280 wd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~  357 (515)
                      ||+++++++..+..+ .+|.+++|+|+|..+++|+.|++++|||++..+.+..+..|. .-|+.+.|+| .|.+|++++.
T Consensus       330 WDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~-nlVS~Vk~~p~~g~fL~Tasy  408 (459)
T KOG0272|consen  330 WDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHS-NLVSQVKYSPQEGYFLVTASY  408 (459)
T ss_pred             eecccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeecccccceeccccc-chhhheEecccCCeEEEEccc
Confidence            999999999988765 489999999999999999999999999999999999999887 8999999998 7899999999


Q ss_pred             CCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEe
Q psy17610        358 DQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWT  407 (515)
Q Consensus       358 dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~  407 (515)
                      |++++||..++..++..+.+|.+.|.++.+++|+..+++++.|.++++|.
T Consensus       409 D~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~  458 (459)
T KOG0272|consen  409 DNTVKIWSTRTWSPLKSLAGHEGKVISLDISPDSQAIATSSFDRTIKLWR  458 (459)
T ss_pred             CcceeeecCCCcccchhhcCCccceEEEEeccCCceEEEeccCceeeecc
Confidence            99999999999999999999999999999999999999999999999995

>KOG0272|consensus

Probab=100.00  E-value=1.9e-48  Score=325.57  Aligned_cols=283  Identities=20%  Similarity=0.321  Sum_probs=265.4

Q ss_pred             ecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCC--CcEEEEEecCCcEEEEeCCC
Q psy17610         78 LKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVN--FSSVFATCSKNDIRIWSVRT  155 (515)
Q Consensus        78 ~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~~~~~d~~i~iw~~~~  155 (515)
                      .+...+|..+.||++++.||+|+-+|.+++|+..+. .....+.+|.+.|.++.|+|.  +..+++++.||++++|++++
T Consensus       172 ~gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~-~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~  250 (459)
T KOG0272|consen  172 VGDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQC-NLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQ  250 (459)
T ss_pred             ccCCCcceeeEeecCCCeEEEeecCCceeEeecCCc-ceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCC
Confidence            356799999999999999999999999999999996 667778899999999999997  56899999999999999999


Q ss_pred             CceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEE
Q psy17610        156 LNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRI  235 (515)
Q Consensus       156 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i  235 (515)
                      ..++..+.+|...|..++|+|+|++|++++.|.+-++||++++...... .+|...|.+++|.|||..+++|+.|..-+|
T Consensus       251 e~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~Q-EGHs~~v~~iaf~~DGSL~~tGGlD~~~Rv  329 (459)
T KOG0272|consen  251 ETPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQ-EGHSKGVFSIAFQPDGSLAATGGLDSLGRV  329 (459)
T ss_pred             CcchhhhhcchhhheeeeecCCCceeeecccccchhhcccccchhhHhh-cccccccceeEecCCCceeeccCccchhhe
Confidence            9999999999999999999999999999999999999999999887665 799999999999999999999999999999


Q ss_pred             EEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCc-cEEEEEEcC-CCcEEEEEE
Q psy17610        236 WKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPS-MIMSAAYHP-SEVQLITCS  313 (515)
Q Consensus       236 w~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~-~~~~l~~~~  313 (515)
                      ||++  ++..+..+.+|..+|..++|+|+|..+++|+.|++++|||++..+.+..+..+. -|..+.|+| .|.+|++++
T Consensus       330 WDlR--tgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~Tas  407 (459)
T KOG0272|consen  330 WDLR--TGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLVTAS  407 (459)
T ss_pred             eecc--cCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeecccccceecccccchhhheEecccCCeEEEEcc
Confidence            9994  667788899999999999999999999999999999999999988887776554 689999999 788999999


Q ss_pred             CCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEE
Q psy17610        314 TNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWM  365 (515)
Q Consensus       314 ~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d  365 (515)
                      .|+++++|...+.++++.+.+|. +.|.++++++|++++++++.|.++++|.
T Consensus       408 yD~t~kiWs~~~~~~~ksLaGHe-~kV~s~Dis~d~~~i~t~s~DRT~KLW~  458 (459)
T KOG0272|consen  408 YDNTVKIWSTRTWSPLKSLAGHE-GKVISLDISPDSQAIATSSFDRTIKLWR  458 (459)
T ss_pred             cCcceeeecCCCcccchhhcCCc-cceEEEEeccCCceEEEeccCceeeecc
Confidence            99999999999999999999998 8999999999999999999999999995

>KOG0315|consensus

Probab=100.00  E-value=2.8e-46  Score=291.06  Aligned_cols=292  Identities=21%  Similarity=0.357  Sum_probs=266.3

Q ss_pred             CEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEE
Q psy17610        179 KAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSV  258 (515)
Q Consensus       179 ~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~  258 (515)
                      -+|++++.|.+|++|...+|.+..++ ...++.|+.+...|+++.|++++. ..|++||+++....++..+.+|...|+.
T Consensus        11 viLvsA~YDhTIRfWqa~tG~C~rTi-qh~dsqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S~np~Pv~t~e~h~kNVta   88 (311)
T KOG0315|consen   11 VILVSAGYDHTIRFWQALTGICSRTI-QHPDSQVNRLEITPDKKDLAAAGN-QHVRLYDLNSNNPNPVATFEGHTKNVTA   88 (311)
T ss_pred             eEEEeccCcceeeeeehhcCeEEEEE-ecCccceeeEEEcCCcchhhhccC-CeeEEEEccCCCCCceeEEeccCCceEE
Confidence            37889999999999999999999999 455678999999999999998876 6799999998888899999999999999


Q ss_pred             EEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCc
Q psy17610        259 IQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVA  338 (515)
Q Consensus       259 ~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~  338 (515)
                      +.|..+|+++++|++||+++|||++...+.+.+.+.+++.++..+|+...|+++..+|.|++||+....+...+......
T Consensus        89 VgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liPe~~~  168 (311)
T KOG0315|consen   89 VGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIPEDDT  168 (311)
T ss_pred             EEEeecCeEEEecCCCceEEEEeccCcccchhccCCCCcceEEecCCcceEEeecCCCcEEEEEccCCccccccCCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999888888777778


Q ss_pred             cEEEEEEcCCCCEEEEEcCCCeEEEEEccCC------eeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCc
Q psy17610        339 AVNCVDFVDDGKYFLTGGADQIVKMWMYREG------VPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELE  412 (515)
Q Consensus       339 ~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  412 (515)
                      .+.++...|||.+++.+...|..++|++-+.      +++..++.|++.+..+.+|||+++|++++.|.+++||+.+..-
T Consensus       169 ~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~~  248 (311)
T KOG0315|consen  169 SIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDFF  248 (311)
T ss_pred             ceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEecCCce
Confidence            9999999999999999999999999998654      5667788999999999999999999999999999999987641


Q ss_pred             CccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEE
Q psy17610        413 DDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDF  492 (515)
Q Consensus       413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~  492 (515)
                                         .....+.+|..++..++||.||+||++++.|+.+++|++..++.++...+|+ .+..|++.
T Consensus       249 -------------------kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v~qy~gh~-K~~vc~~l  308 (311)
T KOG0315|consen  249 -------------------KLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGKEVRQYQGHH-KAAVCVAL  308 (311)
T ss_pred             -------------------eeEEEeecCCceEEeeeeccCccEEEecCCCCceeecccccCceeeecCCcc-cccEEEEe
Confidence                               1233455677899999999999999999999999999999999999999998 66666665

>KOG0286|consensus

Probab=100.00  E-value=8.9e-45  Score=289.36  Aligned_cols=286  Identities=19%  Similarity=0.314  Sum_probs=264.1

Q ss_pred             EEEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeC
Q psy17610         74 ALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSV  153 (515)
Q Consensus        74 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~  153 (515)
                      ...+.+|.+.|.++.|++|.++|++++.||.+.|||.-+..+...+ +-....|..++|+|.|+++++++-|+...||++
T Consensus        48 rr~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~hai-pl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~l  126 (343)
T KOG0286|consen   48 RRTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAI-PLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPL  126 (343)
T ss_pred             EEEecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEE-ecCceeEEEEEECCCCCeEEecCcCceeEEEec
Confidence            4678899999999999999999999999999999999886555443 447788999999999999999999999999999


Q ss_pred             CCC------ceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcC-CCCEEEE
Q psy17610        154 RTL------NELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQ-DGTRLLS  226 (515)
Q Consensus       154 ~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~  226 (515)
                      .+.      ...+.+.+|.+.+.|+.|.+|+ .|++++.|.+..+||+++++....+ .+|.+.|.+++++| +++.+++
T Consensus       127 s~~d~~g~~~v~r~l~gHtgylScC~f~dD~-~ilT~SGD~TCalWDie~g~~~~~f-~GH~gDV~slsl~p~~~ntFvS  204 (343)
T KOG0286|consen  127 STRDAEGNVRVSRELAGHTGYLSCCRFLDDN-HILTGSGDMTCALWDIETGQQTQVF-HGHTGDVMSLSLSPSDGNTFVS  204 (343)
T ss_pred             ccccccccceeeeeecCccceeEEEEEcCCC-ceEecCCCceEEEEEcccceEEEEe-cCCcccEEEEecCCCCCCeEEe
Confidence            865      3456688999999999998855 6999999999999999999999998 79999999999999 9999999


Q ss_pred             ecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCc---cEEEEEEc
Q psy17610        227 GGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPS---MIMSAAYH  303 (515)
Q Consensus       227 ~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---~~~~~~~~  303 (515)
                      |+-|+..++||++  .....+.+.+|...|.++.|.|+|.-+++|+.|++.++||++..+.+..+.++.   ++++++|+
T Consensus       205 g~cD~~aklWD~R--~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS  282 (343)
T KOG0286|consen  205 GGCDKSAKLWDVR--SGQCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFS  282 (343)
T ss_pred             cccccceeeeecc--CcceeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEc
Confidence            9999999999995  457888999999999999999999999999999999999999999999888764   79999999


Q ss_pred             CCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEE
Q psy17610        304 PSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWM  365 (515)
Q Consensus       304 ~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d  365 (515)
                      ..|++|++|..|..+.+||.-.++.+..+.+|. +.|.|+..+|||..+++|+.|..++||.
T Consensus       283 ~SGRlLfagy~d~~c~vWDtlk~e~vg~L~GHe-NRvScl~~s~DG~av~TgSWDs~lriW~  343 (343)
T KOG0286|consen  283 KSGRLLFAGYDDFTCNVWDTLKGERVGVLAGHE-NRVSCLGVSPDGMAVATGSWDSTLRIWA  343 (343)
T ss_pred             ccccEEEeeecCCceeEeeccccceEEEeeccC-CeeEEEEECCCCcEEEecchhHheeecC
Confidence            999999999999999999999999999999887 9999999999999999999999999994

>KOG0286|consensus

Probab=100.00  E-value=1.1e-44  Score=288.74  Aligned_cols=289  Identities=17%  Similarity=0.293  Sum_probs=266.4

Q ss_pred             eEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEec
Q psy17610        116 LTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTP  195 (515)
Q Consensus       116 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~  195 (515)
                      ..++++||.+.|.++.|++|.+++++++.||.+.|||.-+...++.+.-....|..++|+|.|+++|+|+-|+...||++
T Consensus        47 ~rr~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~l  126 (343)
T KOG0286|consen   47 TRRTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPL  126 (343)
T ss_pred             eEEEecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCceeEEEec
Confidence            34788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCC--c---eEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEec-CCCEEE
Q psy17610        196 QSG--K---LKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKS-DSKEAM  269 (515)
Q Consensus       196 ~~~--~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~  269 (515)
                      .+.  +   .+.....+|.+.+.++.|.+|+ .|++++.|.+..+||+  ++.+....+.+|.+.|.++.++| +++.++
T Consensus       127 s~~d~~g~~~v~r~l~gHtgylScC~f~dD~-~ilT~SGD~TCalWDi--e~g~~~~~f~GH~gDV~slsl~p~~~ntFv  203 (343)
T KOG0286|consen  127 STRDAEGNVRVSRELAGHTGYLSCCRFLDDN-HILTGSGDMTCALWDI--ETGQQTQVFHGHTGDVMSLSLSPSDGNTFV  203 (343)
T ss_pred             ccccccccceeeeeecCccceeEEEEEcCCC-ceEecCCCceEEEEEc--ccceEEEEecCCcccEEEEecCCCCCCeEE
Confidence            855  2   2333337999999999999854 6999999999999999  56777888999999999999999 999999


Q ss_pred             EEeCCCcEEEEEcccceEEEEEEcC-ccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCC-CccEEEEEEcC
Q psy17610        270 SASTDGTCVLWDLIKSTRLIIMILP-SMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSD-VAAVNCVDFVD  347 (515)
Q Consensus       270 ~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~i~~~~~~~  347 (515)
                      +|+.|+..++||++.+.+.+.+..+ ..|.++.|.|+|.-+++|+.|++.++||++..+.+..+.... ..+|++++||.
T Consensus       204 Sg~cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~  283 (343)
T KOG0286|consen  204 SGGCDKSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSK  283 (343)
T ss_pred             ecccccceeeeeccCcceeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEcc
Confidence            9999999999999999999998765 579999999999999999999999999999999888887432 36899999999


Q ss_pred             CCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEe
Q psy17610        348 DGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWT  407 (515)
Q Consensus       348 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~  407 (515)
                      .|++|++|..|..+.+||.-.++.+..+.+|...|+++..+|||.-+++|+.|..++||.
T Consensus       284 SGRlLfagy~d~~c~vWDtlk~e~vg~L~GHeNRvScl~~s~DG~av~TgSWDs~lriW~  343 (343)
T KOG0286|consen  284 SGRLLFAGYDDFTCNVWDTLKGERVGVLAGHENRVSCLGVSPDGMAVATGSWDSTLRIWA  343 (343)
T ss_pred             cccEEEeeecCCceeEeeccccceEEEeeccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence            999999999999999999999999999999999999999999999999999999999994

>KOG0279|consensus

Probab=100.00  E-value=1.9e-44  Score=285.65  Aligned_cols=292  Identities=16%  Similarity=0.287  Sum_probs=256.5

Q ss_pred             EEEEEecCCCcEEEEEEecC-CCEEEEEecCceEEEEECCCCc----eeEEeeccCccCeEEEEeCCCCcEEEEEecCCc
Q psy17610         73 TALYLLKDDSGISSLQYNPV-NNKVFVGTVNCEIFLIDMNSGF----TLTLVNTCHTSAIYDLQFPVNFSSVFATCSKND  147 (515)
Q Consensus        73 ~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~d~~i~iw~~~~~~----~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~  147 (515)
                      ..-.+.+|.+.|+.++..+. .+.+++++.|..+.+|++....    .+.+.+.||...|..+..++||++.++++.|++
T Consensus         7 l~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~   86 (315)
T KOG0279|consen    7 LRGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDGT   86 (315)
T ss_pred             eeeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccccce
Confidence            34567799999999999996 5788899999999999986521    245677889999999999999999999999999


Q ss_pred             EEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCC--CCEEE
Q psy17610        148 IRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQD--GTRLL  225 (515)
Q Consensus       148 i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~  225 (515)
                      +++||+.+++..+++.+|...|.+++|+||.+.+++|+.|.+|++|+...+.........+.+-|+|+.|+|+  ..+|+
T Consensus        87 lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~ck~t~~~~~~~~WVscvrfsP~~~~p~Iv  166 (315)
T KOG0279|consen   87 LRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVCKYTIHEDSHREWVSCVRFSPNESNPIIV  166 (315)
T ss_pred             EEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeecccEEEEEecCCCcCcEEEEEEcCCCCCcEEE
Confidence            9999999999999999999999999999999999999999999999987655444433334888999999997  68999


Q ss_pred             EecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCC
Q psy17610        226 SGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPS  305 (515)
Q Consensus       226 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  305 (515)
                      +++.|++|++||+  ...+....+.+|++.++.++++|||..+++|+.||.+.+||++.++.+..+.+...|.+++|+|+
T Consensus       167 s~s~DktvKvWnl--~~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~a~~~v~sl~fspn  244 (315)
T KOG0279|consen  167 SASWDKTVKVWNL--RNCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLEAFDIVNSLCFSPN  244 (315)
T ss_pred             EccCCceEEEEcc--CCcchhhccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCceeEeccCCCeEeeEEecCC
Confidence            9999999999999  56677888999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcEEEEEECCCeEEEEeCCCCceEEEEecCCC--------ccEEEEEEcCCCCEEEEEcCCCeEEEEEcc
Q psy17610        306 EVQLITCSTNKMIDYWETCDGSIIRSLEGSDV--------AAVNCVDFVDDGKYFLTGGADQIVKMWMYR  367 (515)
Q Consensus       306 ~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~--------~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~  367 (515)
                      .-.|..+. +..|+|||+.++..+..+.....        ....+++|++||..|++|..|+.|++|.+.
T Consensus       245 rywL~~at-~~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~g~td~~irv~qv~  313 (315)
T KOG0279|consen  245 RYWLCAAT-ATSIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFAGYTDNVIRVWQVA  313 (315)
T ss_pred             ceeEeecc-CCceEEEeccchhhhhhccccccccccccCCcEEEEEEEcCCCcEEEeeecCCcEEEEEee
Confidence            87776654 44599999999988877653221        235678999999999999999999999874

>KOG0279|consensus

Probab=100.00  E-value=1.5e-42  Score=274.85  Aligned_cols=289  Identities=25%  Similarity=0.390  Sum_probs=248.9

Q ss_pred             ecCCCCCCeEEEEEcCC-CCEEEEecCCCcEEEEEccCCc---eeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEE
Q psy17610        204 IPNAHNRGVTALAITQD-GTRLLSGGGEGQVRIWKLTRES---QSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVL  279 (515)
Q Consensus       204 ~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iw~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i  279 (515)
                      ...+|.+.|+.++..+. ...+++++.|..+.+|++....   +.++..+.+|...|..+..++||+++++++.|+++++
T Consensus        10 tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~lrl   89 (315)
T KOG0279|consen   10 TLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDGTLRL   89 (315)
T ss_pred             eecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccccceEEE
Confidence            33799999999999885 5688899999999999997544   4458889999999999999999999999999999999


Q ss_pred             EEcccceEEEEEEcCc-cEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCC--CCEEEEEc
Q psy17610        280 WDLIKSTRLIIMILPS-MIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDD--GKYFLTGG  356 (515)
Q Consensus       280 wd~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~  356 (515)
                      ||+.+++..+.+..+. .+.+++++||.+.+++|+.|.+|.+|+.............+...|.|+.|+|+  ..+|++++
T Consensus        90 WDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s  169 (315)
T KOG0279|consen   90 WDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVCKYTIHEDSHREWVSCVRFSPNESNPIIVSAS  169 (315)
T ss_pred             EEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeecccEEEEEecCCCcCcEEEEEEcCCCCCcEEEEcc
Confidence            9999998888887665 79999999999999999999999999986555444444433689999999997  78999999


Q ss_pred             CCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeeccccccccee
Q psy17610        357 ADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLI  436 (515)
Q Consensus       357 ~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  436 (515)
                      .|+++++||+++.+....+.+|++.++.+++||||.+.++|+.||.+.+||+...+.                     ..
T Consensus       170 ~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~---------------------ly  228 (315)
T KOG0279|consen  170 WDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKN---------------------LY  228 (315)
T ss_pred             CCceEEEEccCCcchhhccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCce---------------------eE
Confidence            999999999999999999999999999999999999999999999999999987642                     23


Q ss_pred             eecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeeccccc--------ceEEEEEEcCCCcEEEEeecCCeE
Q psy17610        437 IMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDV--------AAVNCVDFVDDGKYFLTGGADQIV  508 (515)
Q Consensus       437 ~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~--------~~v~~~~~s~~~~~l~s~~~dg~v  508 (515)
                      ...+...|.+++|+|+...|+.+... .|+|||++++.++..+.....        ....+++|++||..|+.|-.|+.|
T Consensus       229 sl~a~~~v~sl~fspnrywL~~at~~-sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~g~td~~i  307 (315)
T KOG0279|consen  229 SLEAFDIVNSLCFSPNRYWLCAATAT-SIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFAGYTDNVI  307 (315)
T ss_pred             eccCCCeEeeEEecCCceeEeeccCC-ceEEEeccchhhhhhccccccccccccCCcEEEEEEEcCCCcEEEeeecCCcE
Confidence            34455679999999998888877644 499999999988776653211        234678999999999999999999


Q ss_pred             EEEEEe
Q psy17610        509 KICLYI  514 (515)
Q Consensus       509 ~iw~~~  514 (515)
                      ++|...
T Consensus       308 rv~qv~  313 (315)
T KOG0279|consen  308 RVWQVA  313 (315)
T ss_pred             EEEEee
Confidence            999864

>KOG0296|consensus

Probab=100.00  E-value=2.6e-42  Score=283.63  Aligned_cols=331  Identities=18%  Similarity=0.236  Sum_probs=289.2

Q ss_pred             eEEEEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEE
Q psy17610         72 VTALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIW  151 (515)
Q Consensus        72 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw  151 (515)
                      -....+..|.++|.+++.+|+.+++|+|+.|..-++|+..+|. ....+.+|+..|+++.|+.+|.+|+++..+|.|+||
T Consensus        55 dS~~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge-~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~  133 (399)
T KOG0296|consen   55 DSLVTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGE-FAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVF  133 (399)
T ss_pred             cceeehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCc-ceeEecCCCCceEEEEEccCceEEEecCCCccEEEE
Confidence            4567788899999999999999999999999999999999976 556678899999999999999999999999999999


Q ss_pred             eCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCC
Q psy17610        152 SVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEG  231 (515)
Q Consensus       152 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~  231 (515)
                      ...++.....+...-..+.-+.|+|.+..|+.|+.||.+.+|.+.++...+.+ .+|..++++=.|.|+|+.++++..||
T Consensus       134 ~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~-~Gh~~~ct~G~f~pdGKr~~tgy~dg  212 (399)
T KOG0296|consen  134 KVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVM-SGHNSPCTCGEFIPDGKRILTGYDDG  212 (399)
T ss_pred             EcccCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECCCcceeeEe-cCCCCCcccccccCCCceEEEEecCc
Confidence            99999998888767777888999999999999999999999999997666666 79999999999999999999999999


Q ss_pred             cEEEEEccCCceeeEEeec-cccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC---------cc---EE
Q psy17610        232 QVRIWKLTRESQSLQCVLK-EHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP---------SM---IM  298 (515)
Q Consensus       232 ~i~iw~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~---------~~---~~  298 (515)
                      +|++|++.+.  .+...+. .......++.++..+..++.++.++.+++-+..+++.+......         ..   +.
T Consensus       213 ti~~Wn~ktg--~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve  290 (399)
T KOG0296|consen  213 TIIVWNPKTG--QPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVE  290 (399)
T ss_pred             eEEEEecCCC--ceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhh
Confidence            9999999654  3343333 22445678889999999999999999999998888877766521         12   44


Q ss_pred             EEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCC
Q psy17610        299 SAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGH  378 (515)
Q Consensus       299 ~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~  378 (515)
                      ++.++..-.+.++|+-||+|.+||+...+........  .+|..+.|-+ ..+|++++.+|.|+.||.++|++...+.+|
T Consensus       291 ~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c~he--~~V~~l~w~~-t~~l~t~c~~g~v~~wDaRtG~l~~~y~GH  367 (399)
T KOG0296|consen  291 SIPSSSKLPLAACGSVDGTIAIYDLAASTLRHICEHE--DGVTKLKWLN-TDYLLTACANGKVRQWDARTGQLKFTYTGH  367 (399)
T ss_pred             hcccccccchhhcccccceEEEEecccchhheeccCC--CceEEEEEcC-cchheeeccCceEEeeeccccceEEEEecC
Confidence            4455556677899999999999999887776666544  6799999998 789999999999999999999999999999


Q ss_pred             CCCeeEEEECCCCcEEEEEeCCCcEEEEeCC
Q psy17610        379 AASITKIKISPDKKVIVSVSADGGIFLWTFP  409 (515)
Q Consensus       379 ~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~  409 (515)
                      ...|.+++++|+.++++|+|.|++.++++++
T Consensus       368 ~~~Il~f~ls~~~~~vvT~s~D~~a~VF~v~  398 (399)
T KOG0296|consen  368 QMGILDFALSPQKRLVVTVSDDNTALVFEVP  398 (399)
T ss_pred             chheeEEEEcCCCcEEEEecCCCeEEEEecC
Confidence            9999999999999999999999999999864

>KOG0273|consensus

Probab=100.00  E-value=1.5e-42  Score=294.39  Aligned_cols=329  Identities=17%  Similarity=0.278  Sum_probs=287.7

Q ss_pred             EEEEecCCCcEEEEEEecCCC-EEEEEecCceEEEEECCCCcee---EEeec----------cCccCeEEEEeCCCCcEE
Q psy17610         74 ALYLLKDDSGISSLQYNPVNN-KVFVGTVNCEIFLIDMNSGFTL---TLVNT----------CHTSAIYDLQFPVNFSSV  139 (515)
Q Consensus        74 ~~~~~~~~~~v~~~~~s~~~~-~l~~~~~d~~i~iw~~~~~~~~---~~~~~----------~h~~~v~~~~~~~~~~~l  139 (515)
                      .....+|..+|.+.+|+|-.. .+++|+.|-..++|++......   ...++          .....|++++|+.+|..|
T Consensus       171 ~~kvl~~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~L  250 (524)
T KOG0273|consen  171 KAKVLRHESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLL  250 (524)
T ss_pred             ceeeccCCCceEEEecCchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCeE
Confidence            345666999999999999655 8999999999999998741111   01111          123579999999999999


Q ss_pred             EEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcC
Q psy17610        140 FATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQ  219 (515)
Q Consensus       140 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  219 (515)
                      ++++.||.++||+. +|..+.++..|.++|.++.|+..|++|++++.|+++.+||..+++....+ .-|..+-..+.|-.
T Consensus       251 atG~~~G~~riw~~-~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f-~~~s~~~lDVdW~~  328 (524)
T KOG0273|consen  251 ATGSEDGEARIWNK-DGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQF-EFHSAPALDVDWQS  328 (524)
T ss_pred             EEeecCcEEEEEec-CchhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEee-eeccCCccceEEec
Confidence            99999999999996 47888999999999999999999999999999999999999999988887 57887767888875


Q ss_pred             CCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC-ccEE
Q psy17610        220 DGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP-SMIM  298 (515)
Q Consensus       220 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~  298 (515)
                      + ..+++.+.|+.|+++.+  ....+..++.+|.++|.++.|+|.+.+|++++.|+++++|+.........+..+ ..|.
T Consensus       329 ~-~~F~ts~td~~i~V~kv--~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~  405 (524)
T KOG0273|consen  329 N-DEFATSSTDGCIHVCKV--GEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEIY  405 (524)
T ss_pred             C-ceEeecCCCceEEEEEe--cCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhhhcccee
Confidence            4 46899999999999999  556677888999999999999999999999999999999998887777766554 4799


Q ss_pred             EEEEcCCC---------cEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCC
Q psy17610        299 SAAYHPSE---------VQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREG  369 (515)
Q Consensus       299 ~~~~~~~~---------~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~  369 (515)
                      .+.|+|.+         ..+++++.|+++++||+..+.++..+..|. .+|.+++|+|+|+++|+|+.||.|.+|+.+++
T Consensus       406 t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~-~pVysvafS~~g~ylAsGs~dg~V~iws~~~~  484 (524)
T KOG0273|consen  406 TIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQ-EPVYSVAFSPNGRYLASGSLDGCVHIWSTKTG  484 (524)
T ss_pred             eEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCC-CceEEEEecCCCcEEEecCCCCeeEeccccch
Confidence            99999864         478999999999999999999999998887 99999999999999999999999999999999


Q ss_pred             eeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCC
Q psy17610        370 VPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFP  409 (515)
Q Consensus       370 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~  409 (515)
                      +.++.+.+ .+.|..++|+.+|.+|..+-.|+.+++-|++
T Consensus       485 ~l~~s~~~-~~~Ifel~Wn~~G~kl~~~~sd~~vcvldlr  523 (524)
T KOG0273|consen  485 KLVKSYQG-TGGIFELCWNAAGDKLGACASDGSVCVLDLR  523 (524)
T ss_pred             heeEeecC-CCeEEEEEEcCCCCEEEEEecCCCceEEEec
Confidence            99988865 4569999999999999999999999998874

>KOG0296|consensus

Probab=100.00  E-value=3.5e-42  Score=282.90  Aligned_cols=331  Identities=14%  Similarity=0.214  Sum_probs=289.5

Q ss_pred             ceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEE
Q psy17610        157 NELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIW  236 (515)
Q Consensus       157 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw  236 (515)
                      ..+..+..|...|.+++.+|+.+++++|+.|..-.+|++.+++....+ .+|...|+++.|+.+|.+||+|+.+|.|+||
T Consensus        55 dS~~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~el-tgHKDSVt~~~FshdgtlLATGdmsG~v~v~  133 (399)
T KOG0296|consen   55 DSLVTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGEL-TGHKDSVTCCSFSHDGTLLATGDMSGKVLVF  133 (399)
T ss_pred             cceeehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCcceeEe-cCCCCceEEEEEccCceEEEecCCCccEEEE
Confidence            346678889999999999999999999999999999999999988888 7999999999999999999999999999999


Q ss_pred             EccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC-ccEEEEEEcCCCcEEEEEECC
Q psy17610        237 KLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP-SMIMSAAYHPSEVQLITCSTN  315 (515)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~  315 (515)
                      ...++  .....+......+.-+.|+|.+..|+.|+.||.+.+|.+.++...+.+..+ .++++-.|.|+|+.++++..|
T Consensus       134 ~~stg--~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~d  211 (399)
T KOG0296|consen  134 KVSTG--GEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDD  211 (399)
T ss_pred             EcccC--ceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCCCceEEEEecC
Confidence            99543  444445556677889999999999999999999999999997666666554 589999999999999999999


Q ss_pred             CeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeecc--------CCCCCeeEEE-
Q psy17610        316 KMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGI--------GHAASITKIK-  386 (515)
Q Consensus       316 ~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--------~~~~~i~~~~-  386 (515)
                      |+|++|++.+++++..+.........++.++..+..++.|+.++.+++-+..+++.+....        .+...+.++. 
T Consensus       212 gti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~  291 (399)
T KOG0296|consen  212 GTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVES  291 (399)
T ss_pred             ceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhh
Confidence            9999999999999999986666778899999999999999999999999998888877665        3444455554 


Q ss_pred             --ECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCe
Q psy17610        387 --ISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKM  464 (515)
Q Consensus       387 --~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~  464 (515)
                        ++..-.+.|+|+-||+|.|||+....                     ......|+..|+.+.|-+ ..+|++++.+|.
T Consensus       292 ~~~ss~lpL~A~G~vdG~i~iyD~a~~~---------------------~R~~c~he~~V~~l~w~~-t~~l~t~c~~g~  349 (399)
T KOG0296|consen  292 IPSSSKLPLAACGSVDGTIAIYDLAAST---------------------LRHICEHEDGVTKLKWLN-TDYLLTACANGK  349 (399)
T ss_pred             cccccccchhhcccccceEEEEecccch---------------------hheeccCCCceEEEEEcC-cchheeeccCce
Confidence              44466788999999999999987543                     222334667799999999 789999999999


Q ss_pred             EEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEEEEEE
Q psy17610        465 IDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLY  513 (515)
Q Consensus       465 v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~  513 (515)
                      |+.||.++|++..++.+|. .+|.+++++|+.++++|+|.|++.+||+.
T Consensus       350 v~~wDaRtG~l~~~y~GH~-~~Il~f~ls~~~~~vvT~s~D~~a~VF~v  397 (399)
T KOG0296|consen  350 VRQWDARTGQLKFTYTGHQ-MGILDFALSPQKRLVVTVSDDNTALVFEV  397 (399)
T ss_pred             EEeeeccccceEEEEecCc-hheeEEEEcCCCcEEEEecCCCeEEEEec
Confidence            9999999999999999998 99999999999999999999999999974

>KOG0273|consensus

Probab=100.00  E-value=3.3e-42  Score=292.23  Aligned_cols=326  Identities=20%  Similarity=0.290  Sum_probs=286.6

Q ss_pred             EEecCeEEEEEEEeeCCC-EEEEEeCCCeEEEEecCCC--ceEE--Ee---------cCCCCCCeEEEEEcCCCCEEEEe
Q psy17610        162 ISVMNMICACIVFTYDGK-AILSGWNDGFIRCFTPQSG--KLKF--II---------PNAHNRGVTALAITQDGTRLLSG  227 (515)
Q Consensus       162 ~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~~~~~~--~~~~--~~---------~~~~~~~v~~~~~~~~~~~l~~~  227 (515)
                      +..|..+|.+.+|+|-.. .+++++.+-..++|++...  ....  .+         .......|++++|+.+|..|++|
T Consensus       174 vl~~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~LatG  253 (524)
T KOG0273|consen  174 VLRHESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLLATG  253 (524)
T ss_pred             eccCCCceEEEecCchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCeEEEe
Confidence            334899999999999776 8899999999999998741  1110  00         01234679999999999999999


Q ss_pred             cCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccE-EEEEEcCCC
Q psy17610        228 GGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMI-MSAAYHPSE  306 (515)
Q Consensus       228 ~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~  306 (515)
                      +.||.+++|+.   .+.+..++..|.++|.++.|+..|.++++++.|+++.+||..+++..+.+...+.. ..+.|-. .
T Consensus       254 ~~~G~~riw~~---~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~-~  329 (524)
T KOG0273|consen  254 SEDGEARIWNK---DGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQS-N  329 (524)
T ss_pred             ecCcEEEEEec---CchhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeeeeccCCccceEEec-C
Confidence            99999999996   45567788899999999999999999999999999999999999999888877654 6677754 4


Q ss_pred             cEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEE
Q psy17610        307 VQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIK  386 (515)
Q Consensus       307 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~  386 (515)
                      ..+++.+.|+.|+++.+....++.++.+|+ ++|.++.|+|.|.+|++++.|++++||..........+..|+..|..+.
T Consensus       330 ~~F~ts~td~~i~V~kv~~~~P~~t~~GH~-g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~  408 (524)
T KOG0273|consen  330 DEFATSSTDGCIHVCKVGEDRPVKTFIGHH-GEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEIYTIK  408 (524)
T ss_pred             ceEeecCCCceEEEEEecCCCcceeeeccc-CceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhhhccceeeEe
Confidence            568888999999999999999999999977 9999999999999999999999999999998889999999999999999


Q ss_pred             ECCCC---------cEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEE
Q psy17610        387 ISPDK---------KVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLI  457 (515)
Q Consensus       387 ~~~~~---------~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~  457 (515)
                      |+|.+         ..+++++.|++|++||+..+.                    +...+..|..+|.+++|+|+|+++|
T Consensus       409 wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv--------------------~i~~f~kH~~pVysvafS~~g~ylA  468 (524)
T KOG0273|consen  409 WSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGV--------------------PIHTLMKHQEPVYSVAFSPNGRYLA  468 (524)
T ss_pred             ecCCCCccCCCcCCceEEEeecCCeEEEEEccCCc--------------------eeEeeccCCCceEEEEecCCCcEEE
Confidence            99964         489999999999999997653                    2334567888999999999999999


Q ss_pred             EeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEEEEEEe
Q psy17610        458 TCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLYI  514 (515)
Q Consensus       458 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~  514 (515)
                      +|+.||.|.+|+++++++.+...+.  +.|..++|+.+|..|..+-.||.+.+.||.
T Consensus       469 sGs~dg~V~iws~~~~~l~~s~~~~--~~Ifel~Wn~~G~kl~~~~sd~~vcvldlr  523 (524)
T KOG0273|consen  469 SGSLDGCVHIWSTKTGKLVKSYQGT--GGIFELCWNAAGDKLGACASDGSVCVLDLR  523 (524)
T ss_pred             ecCCCCeeEeccccchheeEeecCC--CeEEEEEEcCCCCEEEEEecCCCceEEEec
Confidence            9999999999999999999999986  679999999999999999999999999985

>KOG1539|consensus

Probab=100.00  E-value=1.3e-40  Score=301.67  Aligned_cols=447  Identities=18%  Similarity=0.200  Sum_probs=363.2

Q ss_pred             eEEeeccccccccccccccccccCcceeeeccceEEEEEecC-CCcEEEEEEec--CCCEEEEEecCceEEEEECCCCce
Q psy17610         39 AVLMGCYGKLIKKKVSTKLKDVNAEDVSLYSAGVTALYLLKD-DSGISSLQYNP--VNNKVFVGTVNCEIFLIDMNSGFT  115 (515)
Q Consensus        39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~--~~~~l~~~~~d~~i~iw~~~~~~~  115 (515)
                      ..++.-+..++.....+.+.+|+...+ .+..... ..+..- .+.|+++. +|  --+.++.|+.+|.+.+|++.++ +
T Consensus       118 ~~l~~fGe~lia~d~~~~l~vw~~s~~-~~e~~l~-~~~~~~~~~~Ital~-HP~TYLNKIvvGs~~G~lql~Nvrt~-K  193 (910)
T KOG1539|consen  118 HLLLPFGEHLIAVDISNILFVWKTSSI-QEELYLQ-STFLKVEGDFITALL-HPSTYLNKIVVGSSQGRLQLWNVRTG-K  193 (910)
T ss_pred             EEEeeecceEEEEEccCcEEEEEeccc-ccccccc-ceeeeccCCceeeEe-cchhheeeEEEeecCCcEEEEEeccC-c
Confidence            455556667777777888888877664 1121111 222222 22388875 55  3467899999999999999996 5


Q ss_pred             eEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCE-EEEEeCCCeEEEEe
Q psy17610        116 LTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKA-ILSGWNDGFIRCFT  194 (515)
Q Consensus       116 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~~~~  194 (515)
                      +...++++...|+++.=+|--..++.+..+|+|.++|++.++.+.+++...++|+.++|..||+. +++++..|.+.+||
T Consensus       194 ~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~sFk~d~g~VtslSFrtDG~p~las~~~~G~m~~wD  273 (910)
T KOG1539|consen  194 VVYTFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDKILMSFKQDWGRVTSLSFRTDGNPLLASGRSNGDMAFWD  273 (910)
T ss_pred             EEEEecccccceeEeccCCcceEEEEeccCceEEEEEcccCcEEEEEEccccceeEEEeccCCCeeEEeccCCceEEEEE
Confidence            56667779999999999998889999999999999999999999999977799999999999975 55666679999999


Q ss_pred             cCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCc--eeeEEeeccccCceEEEEEe-cCCCEEEEE
Q psy17610        195 PQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRES--QSLQCVLKEHTSSVSVIQIK-SDSKEAMSA  271 (515)
Q Consensus       195 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~  271 (515)
                      ++..+.+..+...|.+.|....|.|....+++++.|..+++|-.+.+.  ......-.||..+..++.|. .++..++++
T Consensus       274 Le~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg~pR~LR~R~GHs~Pp~~irfy~~~g~~ilsa  353 (910)
T KOG1539|consen  274 LEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSGDGVPRLLRSRGGHSAPPSCIRFYGSQGHFILSA  353 (910)
T ss_pred             cCCCeeeeeeeccccCCcccceecCCCceEeeccCCCceeEEEeeCCCCcchheeeccCCCCCchheeeeccCcEEEEec
Confidence            999999888878999999999999999999999999999998665443  35566667899999999997 677788888


Q ss_pred             eCCCcEEEEEcc-----------------------------------------------------------------cce
Q psy17610        272 STDGTCVLWDLI-----------------------------------------------------------------KST  286 (515)
Q Consensus       272 ~~d~~i~iwd~~-----------------------------------------------------------------~~~  286 (515)
                      +.|++++.+++.                                                                 +..
T Consensus       354 ~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~  433 (910)
T KOG1539|consen  354 KQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKT  433 (910)
T ss_pred             ccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhhhcceeEEecCcceEEEEeccCcc
Confidence            888877777541                                                                 111


Q ss_pred             E-EEEEEc------CccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEe--cCCCccEEEEEEcCCCCEEEEEcC
Q psy17610        287 R-LIIMIL------PSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLE--GSDVAAVNCVDFVDDGKYFLTGGA  357 (515)
Q Consensus       287 ~-~~~~~~------~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~  357 (515)
                      . ...+..      ...+.+++.++.|+..+.|+..|.|.+|++++|-....+.  ..+..+|+.++...-++.+++++.
T Consensus       434 ~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~  513 (910)
T KOG1539|consen  434 SGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGA  513 (910)
T ss_pred             cccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEcccCeeecccccCccccCceeEEEecCCCceEEEccC
Confidence            0 011111      1357889999999999999999999999999998888883  334489999999999999999999


Q ss_pred             CCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceee
Q psy17610        358 DQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLII  437 (515)
Q Consensus       358 dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  437 (515)
                      +|.+.+||..+..+...+. -...+..+..+.....++.+..|-.|+++|+.+..                    ....+
T Consensus       514 ~Gilkfw~f~~k~l~~~l~-l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~k--------------------vvR~f  572 (910)
T KOG1539|consen  514 DGILKFWDFKKKVLKKSLR-LGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRK--------------------VVREF  572 (910)
T ss_pred             cceEEEEecCCcceeeeec-cCCCcceeeeeehhhhhhhhcCceeEEEEEchhhh--------------------hhHHh
Confidence            9999999998887666653 34668889999988899999999999999986532                    23445


Q ss_pred             ecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecC-CeEEEEE
Q psy17610        438 MILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGAD-QIVKICL  512 (515)
Q Consensus       438 ~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d-g~v~iw~  512 (515)
                      .+|...|++++|||||++|++++.|++|++||+.++.++..+.-.  .+..++.|+|+|.+|||+..| .-|.+|-
T Consensus       573 ~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~vd--~~~~sls~SPngD~LAT~Hvd~~gIylWs  646 (910)
T KOG1539|consen  573 WGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLLVD--SPCTSLSFSPNGDFLATVHVDQNGIYLWS  646 (910)
T ss_pred             hccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEecC--CcceeeEECCCCCEEEEEEecCceEEEEE
Confidence            678899999999999999999999999999999999999888765  689999999999999999988 5688884

>KOG1408|consensus

Probab=100.00  E-value=6.1e-41  Score=298.80  Aligned_cols=453  Identities=14%  Similarity=0.161  Sum_probs=314.2

Q ss_pred             eEEeeccccccccccccccccccCcceeeeccc--eEEEEEecCCCcEEEEEEecCCCEEEEEe--cCceEEEEECCCCc
Q psy17610         39 AVLMGCYGKLIKKKVSTKLKDVNAEDVSLYSAG--VTALYLLKDDSGISSLQYNPVNNKVFVGT--VNCEIFLIDMNSGF  114 (515)
Q Consensus        39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~d~~i~iw~~~~~~  114 (515)
                      ++.+++.+.|-.......+....+=.+-+|...  -+...+..|..+++|+||||+|+|+|+|-  ....+++|++... 
T Consensus        34 GlTv~~~~gLa~~p~Sgl~aYpAGCvVVlfn~~~~tQ~hlvnssRk~~t~vAfS~~GryvatGEcG~~pa~kVw~la~h-  112 (1080)
T KOG1408|consen   34 GLTVKNANGLASVPCSGLCAYPAGCVVVLFNVDSCTQSHLVNSSRKPLTCVAFSQNGRYVATGECGRTPASKVWSLAFH-  112 (1080)
T ss_pred             ceEeecCCcccccccccceeeccCcEEEEEcccccchhheecccCcceeEEEEcCCCcEEEecccCCCccceeeeeccc-
Confidence            455555555555555555555555555555432  23344556788999999999999999985  5678999999984 


Q ss_pred             eeEEeeccCccCeEEEEeCCCCcEEEEEec--CCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEE
Q psy17610        115 TLTLVNTCHTSAIYDLQFPVNFSSVFATCS--KNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRC  192 (515)
Q Consensus       115 ~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~--d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~  192 (515)
                      .+...+..|+-.|+|++|+|.++++++.++  |-.|.+||++....... ..-...|..++|+.||.|+++.+. ..|++
T Consensus       113 ~vVAEfvdHKY~vtcvaFsp~~kyvvSVGsQHDMIVnv~dWr~N~~~as-nkiss~Vsav~fsEdgSYfvT~gn-rHvk~  190 (1080)
T KOG1408|consen  113 GVVAEFVDHKYNVTCVAFSPGNKYVVSVGSQHDMIVNVNDWRVNSSGAS-NKISSVVSAVAFSEDGSYFVTSGN-RHVKL  190 (1080)
T ss_pred             cchhhhhhccccceeeeecCCCcEEEeeccccceEEEhhhhhhcccccc-cccceeEEEEEEccCCceeeeeee-eeEEE
Confidence            445556679999999999999999999888  55688898764322211 112345566666666666665543 34666


Q ss_pred             EecCCCc-------------------------------------------------------------------------
Q psy17610        193 FTPQSGK-------------------------------------------------------------------------  199 (515)
Q Consensus       193 ~~~~~~~-------------------------------------------------------------------------  199 (515)
                      |.++.++                                                                         
T Consensus       191 wyl~~~~KykdpiPl~gRs~~lg~lr~n~f~avaCg~gicAestfait~qGhLvEFSsRRLLDKWVqcRTTnAnCIcVs~  270 (1080)
T KOG1408|consen  191 WYLQIQSKYKDPIPLPGRSYFLGNLRFNEFLAVACGVGICAESTFAITAQGHLVEFSSRRLLDKWVQCRTTNANCICVSS  270 (1080)
T ss_pred             EEeeccccccCCccccchhhhccccccchhhhhhhcCcccccceEEEecccceeeechhhhhhhhhhhhccccceeeeec
Confidence            6554333                                                                         


Q ss_pred             ---------------------eEEEecCCCC-----------------------CCeEEEEEcCCCCEEEEecCCCcEEE
Q psy17610        200 ---------------------LKFIIPNAHN-----------------------RGVTALAITQDGTRLLSGGGEGQVRI  235 (515)
Q Consensus       200 ---------------------~~~~~~~~~~-----------------------~~v~~~~~~~~~~~l~~~~~d~~i~i  235 (515)
                                           ...+++..|.                       ....++.|++....|.....|..+++
T Consensus       271 r~I~cgCa~g~vrlFnp~tL~y~~Tlpr~halg~d~a~~~q~~~~~s~~~~a~fPD~IA~~Fdet~~klscVYndhSlYv  350 (1080)
T KOG1408|consen  271 RLIACGCAKGMVRLFNPETLDYAGTLPRSHALGSDTANLSQPEPKNSESSPAIFPDAIACQFDETTDKLSCVYNDHSLYV  350 (1080)
T ss_pred             ceEEEeeccceeeecCcchhhhccccccccccccchhhcccccccccccCcccCCceeEEEecCCCceEEEEEcCceEEE
Confidence                                 2222211110                       01223455555555555555666666


Q ss_pred             EEccCCce-eeEEeeccccCceEEEEEecC-----------CCEEEEEeCCCcEEEEEcccceEEEE-------------
Q psy17610        236 WKLTRESQ-SLQCVLKEHTSSVSVIQIKSD-----------SKEAMSASTDGTCVLWDLIKSTRLII-------------  290 (515)
Q Consensus       236 w~~~~~~~-~~~~~~~~~~~~v~~~~~~~~-----------~~~l~~~~~d~~i~iwd~~~~~~~~~-------------  290 (515)
                      ||++.... .....+..|...|+.+..-|-           ...|++++.|++|++||+.....-..             
T Consensus       351 WDvrD~~kvgk~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l~ki  430 (1080)
T KOG1408|consen  351 WDVRDVNKVGKCSSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRLWDLAFCTNNQVYRRNILSANLSKI  430 (1080)
T ss_pred             EeccccccccceeeeeeccceeeeeccccccccCcccccCCccceeEecCCCcEEEeecccccccceeecccchhhhhcC
Confidence            66543211 112233446666766655441           23589999999999999865211100             


Q ss_pred             -------------------------EEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEE
Q psy17610        291 -------------------------MILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDF  345 (515)
Q Consensus       291 -------------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~  345 (515)
                                               ......+.+++.+|++++|++|...|.+++|++...+....++.|. ..|.|+.+
T Consensus       431 ~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eAHe-sEilcLey  509 (1080)
T KOG1408|consen  431 PYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQHLASGDRGGNLRVYDLQELEYTCFMEAHE-SEILCLEY  509 (1080)
T ss_pred             ccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCcceecccCccCceEEEEehhhhhhhheeccc-ceeEEEee
Confidence                                     0011248999999999999999999999999999999888888887 89999999


Q ss_pred             cC---CCCEEEEEcCCCeEEEEEccCC-eeeeeccCCCCCeeEEEECCC-------------------------------
Q psy17610        346 VD---DGKYFLTGGADQIVKMWMYREG-VPCFVGIGHAASITKIKISPD-------------------------------  390 (515)
Q Consensus       346 ~~---~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~~-------------------------------  390 (515)
                      +.   ..++||+++.|..|.+||+... .++.++.+|...|+++.|.-.                               
T Consensus       510 S~p~~~~kLLASasrdRlIHV~Dv~rny~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r  589 (1080)
T KOG1408|consen  510 SFPVLTNKLLASASRDRLIHVYDVKRNYDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPR  589 (1080)
T ss_pred             cCchhhhHhhhhccCCceEEEEecccccchhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccc
Confidence            86   3578999999999999998643 455666777777776666443                               


Q ss_pred             ------------------CcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccC
Q psy17610        391 ------------------KKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPS  452 (515)
Q Consensus       391 ------------------~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~  452 (515)
                                        .+++++++.|..|+||++..++....                 ......+.+....+...|.
T Consensus       590 ~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~-----------------FKgs~~~eG~lIKv~lDPS  652 (1080)
T KOG1408|consen  590 HTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKS-----------------FKGSRDHEGDLIKVILDPS  652 (1080)
T ss_pred             cccccccceEEEeeeCCCcceEEEEecccceEEEeccccceeee-----------------ecccccCCCceEEEEECCC
Confidence                              34555555555555555554431110                 0011235566788999999


Q ss_pred             CcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEEEEEE
Q psy17610        453 EVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLY  513 (515)
Q Consensus       453 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~  513 (515)
                      |.|+|+.+.|.++.++|..+|+++..+.+|. ..|+.+.|.+|-+.|++.+.||+|.||.+
T Consensus       653 giY~atScsdktl~~~Df~sgEcvA~m~GHs-E~VTG~kF~nDCkHlISvsgDgCIFvW~l  712 (1080)
T KOG1408|consen  653 GIYLATSCSDKTLCFVDFVSGECVAQMTGHS-EAVTGVKFLNDCKHLISVSGDGCIFVWKL  712 (1080)
T ss_pred             ccEEEEeecCCceEEEEeccchhhhhhcCcc-hheeeeeecccchhheeecCCceEEEEEC
Confidence            9999999999999999999999999999998 99999999999999999999999999985

>KOG2106|consensus

Probab=100.00  E-value=6e-39  Score=274.78  Aligned_cols=445  Identities=16%  Similarity=0.250  Sum_probs=339.5

Q ss_pred             cccccccccccCcceeeeccceEEEEEe-cCCCcEEEEEEec--CCCEEEEEe--cCceEEEEECCCCceeEEeeccCcc
Q psy17610         51 KKVSTKLKDVNAEDVSLYSAGVTALYLL-KDDSGISSLQYNP--VNNKVFVGT--VNCEIFLIDMNSGFTLTLVNTCHTS  125 (515)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~--~~~~l~~~~--~d~~i~iw~~~~~~~~~~~~~~h~~  125 (515)
                      ...+..+++|+..+..       .+..+ .-...|+|++||+  .|.+|..-.  .+..+.+||++.+.....+. ...+
T Consensus       130 ~~~~phvriWdsv~L~-------TL~V~g~f~~GV~~vaFsk~~~G~~l~~vD~s~~h~lSVWdWqk~~~~~~vk-~sne  201 (626)
T KOG2106|consen  130 RPLQPHVRIWDSVTLS-------TLHVIGFFDRGVTCVAFSKINGGSLLCAVDDSNPHMLSVWDWQKKAKLGPVK-TSNE  201 (626)
T ss_pred             CcCCCeeeecccccce-------eeeeeccccccceeeeecccCCCceEEEecCCCccccchhhchhhhccCcce-eccc
Confidence            3445667777765443       33333 3567899999999  345555543  34678999998865544443 3566


Q ss_pred             CeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEE----ecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceE
Q psy17610        126 AIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRIS----VMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLK  201 (515)
Q Consensus       126 ~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~  201 (515)
                      .|....|+|.++.++..+..+.+.+|+.+.+...++..    .....|.|++|.++|+ +++|..+|.|.+|+..+.+..
T Consensus       202 ~v~~a~FHPtd~nliit~Gk~H~~Fw~~~~~~l~k~~~~fek~ekk~Vl~v~F~engd-viTgDS~G~i~Iw~~~~~~~~  280 (626)
T KOG2106|consen  202 VVFLATFHPTDPNLIITCGKGHLYFWTLRGGSLVKRQGIFEKREKKFVLCVTFLENGD-VITGDSGGNILIWSKGTNRIS  280 (626)
T ss_pred             eEEEEEeccCCCcEEEEeCCceEEEEEccCCceEEEeeccccccceEEEEEEEcCCCC-EEeecCCceEEEEeCCCceEE
Confidence            78999999999999999999999999999887665532    2235799999999997 889999999999999888888


Q ss_pred             EEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCce--------------------------------------
Q psy17610        202 FIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQ--------------------------------------  243 (515)
Q Consensus       202 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~--------------------------------------  243 (515)
                      +... .|.+.|.+++...+|. |++|+.|..|..||-+-.+.                                      
T Consensus       281 k~~~-aH~ggv~~L~~lr~Gt-llSGgKDRki~~Wd~~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~  358 (626)
T KOG2106|consen  281 KQVH-AHDGGVFSLCMLRDGT-LLSGGKDRKIILWDDNYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLEN  358 (626)
T ss_pred             eEee-ecCCceEEEEEecCcc-EeecCccceEEeccccccccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecC
Confidence            8875 9999999999999996 55599999999998421100                                      


Q ss_pred             eeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeC
Q psy17610        244 SLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWET  323 (515)
Q Consensus       244 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~  323 (515)
                      .......+|......++.+|+.+.+++++.|+.+++|+  ..+.........+..++.|+|.+ .++.|...|...+.|.
T Consensus       359 ~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~~k~~wt~~~~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~  435 (626)
T KOG2106|consen  359 GFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--DHKLEWTKIIEDPAECADFHPSG-VVAVGTATGRWFVLDT  435 (626)
T ss_pred             CceEEEEecccceeeEEcCCChhheeeccCcceEEEcc--CCceeEEEEecCceeEeeccCcc-eEEEeeccceEEEEec
Confidence            01223456888889999999999999999999999999  66777777888899999999999 9999999999999999


Q ss_pred             CCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCC-eeeee-ccCCCCCeeEEEECCCCcEEEEEeCCC
Q psy17610        324 CDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREG-VPCFV-GIGHAASITKIKISPDKKVIVSVSADG  401 (515)
Q Consensus       324 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg  401 (515)
                      ++...+..-..  ..++++++|+|+|.+||+|+.|+.|++|.+... ..... -+.+..+|+.+.||+|+++|.+-+.|-
T Consensus       436 e~~~lv~~~~d--~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~Ds~~~~~~S~d~  513 (626)
T KOG2106|consen  436 ETQDLVTIHTD--NEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCSGSPITHLDWSSDSQFLVSNSGDY  513 (626)
T ss_pred             ccceeEEEEec--CCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeeecCceeEEeeecCCCceEEeccCce
Confidence            99555544444  489999999999999999999999999998654 22222 233448999999999999999999999


Q ss_pred             cEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCe---eeee
Q psy17610        402 GIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGS---IIRS  478 (515)
Q Consensus       402 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~---~~~~  478 (515)
                      .|..|. +..-.+....+...-....... .-......+...+..++-+.+++++|+|.+.|.|++|...--+   +...
T Consensus       514 eiLyW~-~~~~~~~ts~kDvkW~t~~c~l-GF~v~g~s~~t~i~a~~rs~~~~~lA~gdd~g~v~lf~yPc~s~rA~~he  591 (626)
T KOG2106|consen  514 EILYWK-PSECKQITSVKDVKWATYTCTL-GFEVFGGSDGTDINAVARSHCEKLLASGDDFGKVHLFSYPCSSPRAPSHE  591 (626)
T ss_pred             EEEEEc-cccCcccceecceeeeeeEEEE-EEEEecccCCchHHHhhhhhhhhhhhccccCceEEEEccccCCCccccee
Confidence            999993 3322222221111110000000 0001112355567888889999999999999999999865333   3455


Q ss_pred             ecccccceEEEEEEcCCCcEEEEeecCCeEEEEEEe
Q psy17610        479 LEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLYI  514 (515)
Q Consensus       479 ~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~  514 (515)
                      +.+|. +.|++++|..+...|++.+.|..|..|+++
T Consensus       592 ~~ghs-~~vt~V~Fl~~d~~li~tg~D~Si~qW~lv  626 (626)
T KOG2106|consen  592 YGGHS-SHVTNVAFLCKDSHLISTGKDTSIMQWRLV  626 (626)
T ss_pred             ecccc-ceeEEEEEeeCCceEEecCCCceEEEEEeC
Confidence            66776 899999999999999998899999999874

>KOG0315|consensus

Probab=100.00  E-value=1.8e-40  Score=258.69  Aligned_cols=289  Identities=20%  Similarity=0.352  Sum_probs=247.8

Q ss_pred             CEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCc--eeEEEEecCeEEEE
Q psy17610         94 NKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLN--ELLRISVMNMICAC  171 (515)
Q Consensus        94 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~v~~  171 (515)
                      -+|++++.|.+|++|...+|.....+. ...+.|+.+...|+++.|++++ ...||+||+.+++  ++.++.+|...|++
T Consensus        11 viLvsA~YDhTIRfWqa~tG~C~rTiq-h~dsqVNrLeiTpdk~~LAaa~-~qhvRlyD~~S~np~Pv~t~e~h~kNVta   88 (311)
T KOG0315|consen   11 VILVSAGYDHTIRFWQALTGICSRTIQ-HPDSQVNRLEITPDKKDLAAAG-NQHVRLYDLNSNNPNPVATFEGHTKNVTA   88 (311)
T ss_pred             eEEEeccCcceeeeeehhcCeEEEEEe-cCccceeeEEEcCCcchhhhcc-CCeeEEEEccCCCCCceeEEeccCCceEE
Confidence            478999999999999999987766554 3667899999999987776665 4679999999876  58899999999999


Q ss_pred             EEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeecc
Q psy17610        172 IVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKE  251 (515)
Q Consensus       172 ~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~  251 (515)
                      +.|..+|+.+++|++||+++|||++...+.+.+  .|..+|+++..+|+...|++|..+|.|++||+...... ....+.
T Consensus        89 VgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~--~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~-~~liPe  165 (311)
T KOG0315|consen   89 VGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNY--QHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCT-HELIPE  165 (311)
T ss_pred             EEEeecCeEEEecCCCceEEEEeccCcccchhc--cCCCCcceEEecCCcceEEeecCCCcEEEEEccCCccc-cccCCC
Confidence            999999999999999999999999996666655  67899999999999999999999999999999644222 223344


Q ss_pred             ccCceEEEEEecCCCEEEEEeCCCcEEEEEcccce------EEEEEE-cCccEEEEEEcCCCcEEEEEECCCeEEEEeCC
Q psy17610        252 HTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKST------RLIIMI-LPSMIMSAAYHPSEVQLITCSTNKMIDYWETC  324 (515)
Q Consensus       252 ~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~------~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~  324 (515)
                      ...+|.++...|||.+++.+...|..++|++-+..      ++..+. +...+..+.++|++++|++++.|.++++|+..
T Consensus       166 ~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~  245 (311)
T KOG0315|consen  166 DDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTD  245 (311)
T ss_pred             CCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEecC
Confidence            56789999999999999999999999999987643      233333 33468999999999999999999999999998


Q ss_pred             CC-ceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEEC
Q psy17610        325 DG-SIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKIS  388 (515)
Q Consensus       325 ~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~  388 (515)
                      +. +....+.++. ..+...+||.||+||++|+.|+.+++|++..++.+....+|.....+++..
T Consensus       246 ~~~kle~~l~gh~-rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v~qy~gh~K~~vc~~ln  309 (311)
T KOG0315|consen  246 DFFKLELVLTGHQ-RWVWDCAFSADGEYLVTASSDHTARLWDLSAGKEVRQYQGHHKAAVCVALN  309 (311)
T ss_pred             CceeeEEEeecCC-ceEEeeeeccCccEEEecCCCCceeecccccCceeeecCCcccccEEEEee
Confidence            88 5555666665 899999999999999999999999999999999999999999888887764

>KOG0276|consensus

Probab=100.00  E-value=3.6e-40  Score=289.45  Aligned_cols=424  Identities=14%  Similarity=0.190  Sum_probs=320.0

Q ss_pred             ecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCc
Q psy17610         78 LKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLN  157 (515)
Q Consensus        78 ~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~  157 (515)
                      ..++..|.++.|+|...+++++-.+|.+.|||.++ +.+...+.-..-||.+..|-+..+++++++.|..|+|++..+++
T Consensus        10 ~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyet-qtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfnynt~e   88 (794)
T KOG0276|consen   10 QSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYET-QTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYNTGE   88 (794)
T ss_pred             hccCCceeeeecCCCCceEEEeeecCeeEEEeccc-ceeeeeeeecccchhhheeeeccceEEEecCCceEEEEecccce
Confidence            34889999999999999999999999999999999 56666666678899999999888899999999999999999999


Q ss_pred             eeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcC-CCCEEEEecCCCcEEEE
Q psy17610        158 ELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQ-DGTRLLSGGGEGQVRIW  236 (515)
Q Consensus       158 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw  236 (515)
                      .+..+..|.+-|.+++.+|...++++++.|-.|++||.+.+-.......+|...|.+++|+| |.+.+++++-|++|++|
T Consensus        89 kV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVW  168 (794)
T KOG0276|consen   89 KVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVW  168 (794)
T ss_pred             eeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEE
Confidence            99999999999999999999999999999999999999887554444489999999999999 77899999999999999


Q ss_pred             EccCCceeeEEeeccccCceEEEEEecC--CCEEEEEeCCCcEEEEEcccceEEEEEEcC-ccEEEEEEcCCCcEEEEEE
Q psy17610        237 KLTRESQSLQCVLKEHTSSVSVIQIKSD--SKEAMSASTDGTCVLWDLIKSTRLIIMILP-SMIMSAAYHPSEVQLITCS  313 (515)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~  313 (515)
                      .+  ++..+..++.+|...|.++.+-+-  ..++++|+.|.++++||.++..+++++..+ ..+..+.|+|.-..+++|+
T Consensus       169 sl--gs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~lpiiisgs  246 (794)
T KOG0276|consen  169 SL--GSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPELPIIISGS  246 (794)
T ss_pred             Ec--CCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccceEEEecCCCcEEEEec
Confidence            99  566777889999999999999774  468999999999999999999999999855 5799999999999999999


Q ss_pred             CCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeec------------------
Q psy17610        314 TNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVG------------------  375 (515)
Q Consensus       314 ~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~------------------  375 (515)
                      +||++++|...+-+...++.-.- ..+.|++-.+.++.+++|..+|.+.+ .+...++...+                  
T Consensus       247 EDGTvriWhs~Ty~lE~tLn~gl-eRvW~I~~~k~~~~i~vG~Deg~i~v-~lgreeP~vsMd~~gKIiwa~~~ei~~~~  324 (794)
T KOG0276|consen  247 EDGTVRIWNSKTYKLEKTLNYGL-ERVWCIAAHKGDGKIAVGFDEGSVTV-KLGREEPAVSMDSNGKIIWAVHSEIQAVN  324 (794)
T ss_pred             CCccEEEecCcceehhhhhhcCC-ceEEEEeecCCCCeEEEeccCCcEEE-EccCCCCceeecCCccEEEEcCceeeeee
Confidence            99999999998888877777655 88999999998888999988876644 22111111000                  


Q ss_pred             ----c-------------------CCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCc-cCCCcccc------eee
Q psy17610        376 ----I-------------------GHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDD-VGDSRSLS------SKI  425 (515)
Q Consensus       376 ----~-------------------~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~-~~~~~~~~------~~~  425 (515)
                          .                   .-.-....++-+|+|+++++| .||.-.||..-..... ......+.      .-.
T Consensus       325 ~ks~~~~~ev~DgErL~LsvKeLgs~eiyPq~L~hsPNGrfV~Vc-gdGEyiIyTala~RnK~fG~~~eFvw~~dsne~a  403 (794)
T KOG0276|consen  325 LKSVGAQKEVTDGERLPLSVKELGSVEIYPQTLAHSPNGRFVVVC-GDGEYIIYTALALRNKAFGSGLEFVWAADSNEFA  403 (794)
T ss_pred             ceeccCcccccCCccccchhhhccccccchHHhccCCCCcEEEEe-cCccEEEEEeeehhhcccccceeEEEcCCCCeEE
Confidence                0                   000112346778899877766 6788777753322111 00000000      000


Q ss_pred             ecccccccceeeecCcccEEEeeecc---CCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEe
Q psy17610        426 SRSTARSTRLIIMILPSMIMSAAYHP---SEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTG  502 (515)
Q Consensus       426 ~~~~~~~~~~~~~~~~~~i~~~~~s~---~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~  502 (515)
                      .+................-....++.   -|..|+....++.+++||-+++++++.+...    ...+.|+.+|.+++.+
T Consensus       404 vRes~~~vki~knfke~ksi~~~~~~e~i~gg~Llg~~ss~~~~fydW~~~~lVrrI~v~----~k~v~w~d~g~lVai~  479 (794)
T KOG0276|consen  404 VRESNGNVKIFKNFKEHKSIRPDMSAEGIFGGPLLGVRSSDFLCFYDWESGELVRRIEVT----SKHVYWSDNGELVAIA  479 (794)
T ss_pred             EEecCCceEEEecceeccccccccceeeecCCceEEEEeCCeEEEEEcccceEEEEEeec----cceeEEecCCCEEEEE
Confidence            00000000000000000000111111   1334444455677999999999999998753    3568999999988888


Q ss_pred             ecCCeEEEEE
Q psy17610        503 GADQIVKICL  512 (515)
Q Consensus       503 ~~dg~v~iw~  512 (515)
                      +.|. ..++.
T Consensus       480 ~d~S-fyil~  488 (794)
T KOG0276|consen  480 GDDS-FYILK  488 (794)
T ss_pred             ecCc-eeEEE
Confidence            7765 44443

>KOG0295|consensus

Probab=100.00  E-value=1.5e-41  Score=279.08  Aligned_cols=304  Identities=20%  Similarity=0.318  Sum_probs=273.4

Q ss_pred             EEEEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEe
Q psy17610         73 TALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWS  152 (515)
Q Consensus        73 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~  152 (515)
                      ....+.+|..+|+.+-|+|+-..+++++.|++|++||..+|+ +...++||.+.+..++|+..|+++++++.|-.+++||
T Consensus       100 l~~~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~-~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd  178 (406)
T KOG0295|consen  100 LVQKLAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETGE-LERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWD  178 (406)
T ss_pred             chhhhhccccceeeeeeccCceEEEEecCCceEEEEEccchh-hhhhhhccccceeEEEEecCccEEEecCCccchhhee
Confidence            345677899999999999999999999999999999999964 4778899999999999999999999999999999999


Q ss_pred             CCC-CceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCC
Q psy17610        153 VRT-LNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEG  231 (515)
Q Consensus       153 ~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~  231 (515)
                      .++ .++++...+|...|.++.|-|.|.++++++.|.+|+.|++.++.++.++ .+|..-|..++.+.||..+++++.|.
T Consensus       179 ~~~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~-~~h~ewvr~v~v~~DGti~As~s~dq  257 (406)
T KOG0295|consen  179 FDTFFRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTF-PGHSEWVRMVRVNQDGTIIASCSNDQ  257 (406)
T ss_pred             HHHHHHHHHHhcCcccceeeEEEEecCCeeeecccccceeEEecccceeEEec-cCchHhEEEEEecCCeeEEEecCCCc
Confidence            987 5678888899999999999999999999999999999999999999999 69999999999999999999999999


Q ss_pred             cEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEE
Q psy17610        232 QVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLIT  311 (515)
Q Consensus       232 ~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  311 (515)
                      ++++|-+  ....+...+..|.-+|.+++|.|...+  ....+.        ++.                ...++++.+
T Consensus       258 tl~vW~~--~t~~~k~~lR~hEh~vEci~wap~~~~--~~i~~a--------t~~----------------~~~~~~l~s  309 (406)
T KOG0295|consen  258 TLRVWVV--ATKQCKAELREHEHPVECIAWAPESSY--PSISEA--------TGS----------------TNGGQVLGS  309 (406)
T ss_pred             eEEEEEe--ccchhhhhhhccccceEEEEecccccC--cchhhc--------cCC----------------CCCccEEEe
Confidence            9999998  455566678899999999999886432  110000        000                013568889


Q ss_pred             EECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCC
Q psy17610        312 CSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDK  391 (515)
Q Consensus       312 ~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~  391 (515)
                      ++.|++|++||+.++.++.++.+|. ..|..++|+|.|+||+++.+|+++++||++++++...+..|+.-++++.|+.+.
T Consensus       310 ~SrDktIk~wdv~tg~cL~tL~ghd-nwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~~  388 (406)
T KOG0295|consen  310 GSRDKTIKIWDVSTGMCLFTLVGHD-NWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHFVTSLDFHKTA  388 (406)
T ss_pred             ecccceEEEEeccCCeEEEEEeccc-ceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCCCcceeEEEecCCCC
Confidence            9999999999999999999999988 899999999999999999999999999999999999999999999999999999


Q ss_pred             cEEEEEeCCCcEEEEe
Q psy17610        392 KVIVSVSADGGIFLWT  407 (515)
Q Consensus       392 ~~l~~~~~dg~i~iw~  407 (515)
                      .++++|+-|..+++|.
T Consensus       389 p~VvTGsVdqt~KvwE  404 (406)
T KOG0295|consen  389 PYVVTGSVDQTVKVWE  404 (406)
T ss_pred             ceEEeccccceeeeee
Confidence            9999999999999996

>KOG0292|consensus

Probab=100.00  E-value=1e-38  Score=291.23  Aligned_cols=436  Identities=15%  Similarity=0.214  Sum_probs=325.2

Q ss_pred             CccCCCCceEEEecCCCCeEEEEcCCCCCCcccccccceEEeeccccccccccccccccccCcceeeeccceEEEEEecC
Q psy17610          1 MKTTPNDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMGCYGKLIKKKVSTKLKDVNAEDVSLYSAGVTALYLLKD   80 (515)
Q Consensus         1 ~~~~~~~~~~~~g~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (515)
                      |+|.|..-+++++-++|.|..||..-..+                                            .-.+.+|
T Consensus        15 lsFHP~rPwILtslHsG~IQlWDYRM~tl--------------------------------------------i~rFdeH   50 (1202)
T KOG0292|consen   15 LSFHPKRPWILTSLHSGVIQLWDYRMGTL--------------------------------------------IDRFDEH   50 (1202)
T ss_pred             eecCCCCCEEEEeecCceeeeehhhhhhH--------------------------------------------Hhhhhcc
Confidence            57899999999999999999999775422                                            2234469


Q ss_pred             CCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeE
Q psy17610         81 DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELL  160 (515)
Q Consensus        81 ~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~  160 (515)
                      +++|..++|+|.+.++++|+.|-.|++|++++ ......+.||-+.|..+.|++..+++++++.|.+|+|||+.+++++.
T Consensus        51 dGpVRgv~FH~~qplFVSGGDDykIkVWnYk~-rrclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~ia  129 (1202)
T KOG0292|consen   51 DGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKT-RRCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIA  129 (1202)
T ss_pred             CCccceeeecCCCCeEEecCCccEEEEEeccc-ceehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEE
Confidence            99999999999999999999999999999999 56666788899999999999999999999999999999999999999


Q ss_pred             EEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCc----------------------------eEEEecCCCCCCe
Q psy17610        161 RISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGK----------------------------LKFIIPNAHNRGV  212 (515)
Q Consensus       161 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~----------------------------~~~~~~~~~~~~v  212 (515)
                      .+.+|..-|.|..|+|....+++++-|.+|++||+..-+                            .+..+..+|...|
T Consensus       130 vltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGV  209 (1202)
T KOG0292|consen  130 VLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGV  209 (1202)
T ss_pred             EEecCceEEEeeccCCccceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeeccccccc
Confidence            999999999999999999999999999999999975311                            1233447899999


Q ss_pred             EEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEE
Q psy17610        213 TALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMI  292 (515)
Q Consensus       213 ~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~  292 (515)
                      +-++|+|.-..+++|+.|..|++|..+..+.-...+..+|.+.|.++-|+|..+++++.++|++|++||+...+.++.+.
T Consensus       210 NwaAfhpTlpliVSG~DDRqVKlWrmnetKaWEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~tfr  289 (1202)
T KOG0292|consen  210 NWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTFR  289 (1202)
T ss_pred             ceEEecCCcceEEecCCcceeeEEEeccccceeehhhhcccCCcceEEecCccceeEecCCCccEEEEecccccceeeee
Confidence            99999999999999999999999999755555566788999999999999999999999999999999999999999886


Q ss_pred             cC-ccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCee
Q psy17610        293 LP-SMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVP  371 (515)
Q Consensus       293 ~~-~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~  371 (515)
                      .. .....++.+|..+++++|...|.+ +|.++..           .++  .+.+  ++.|+-.- |..|+-+|+.+.+.
T Consensus       290 rendRFW~laahP~lNLfAAgHDsGm~-VFkleRE-----------rpa--~~v~--~n~LfYvk-d~~i~~~d~~t~~d  352 (1202)
T KOG0292|consen  290 RENDRFWILAAHPELNLFAAGHDSGMI-VFKLERE-----------RPA--YAVN--GNGLFYVK-DRFIRSYDLRTQKD  352 (1202)
T ss_pred             ccCCeEEEEEecCCcceeeeecCCceE-EEEEccc-----------Cce--EEEc--CCEEEEEc-cceEEeeecccccc
Confidence            55 578999999999999988776654 4443222           222  2333  23343333 88999999987533


Q ss_pred             --eeeccCC---CCCeeEEEECCCCcEEEEEe--CCCcEEEEeCCCCcCccCCCcccc---ee----eecc-----cccc
Q psy17610        372 --CFVGIGH---AASITKIKISPDKKVIVSVS--ADGGIFLWTFPELEDDVGDSRSLS---SK----ISRS-----TARS  432 (515)
Q Consensus       372 --~~~~~~~---~~~i~~~~~~~~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~~---~~----~~~~-----~~~~  432 (515)
                        +..++..   ..++.++.++|..+.+..++  ..|...++.+..............   ..    ..+.     ....
T Consensus       353 ~~v~~lr~~g~~~~~~~smsYNpae~~vlics~~~n~~y~L~~ipk~~~~~~~~~~~~k~tG~~a~fvarNrfavl~k~~  432 (1202)
T KOG0292|consen  353 TAVASLRRPGTLWQPPRSLSYNPAENAVLICSNLDNGEYELVQIPKDSDGVSDGKDVKKGTGEGALFVARNRFAVLDKSN  432 (1202)
T ss_pred             ceeEeccCCCcccCCcceeeeccccCeEEEEeccCCCeEEEEEecCcccccCCchhhhcCCCCceEEEEecceEEEEecC
Confidence              3344333   36789999999666554443  345666676655422111110000   00    0000     0000


Q ss_pred             cceeeecC----------cccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEe
Q psy17610        433 TRLIIMIL----------PSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTG  502 (515)
Q Consensus       433 ~~~~~~~~----------~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~  502 (515)
                      ........          +.....+-+...|.+|+.  ....|.+||++..+.+..+..   ..+.-+.||+|..+++--
T Consensus       433 ~~v~ik~l~N~vtkkl~~~~~~~~IF~ag~g~lll~--~~~~v~lfdvQq~~~~~si~~---s~vkyvvws~dm~~vAll  507 (1202)
T KOG0292|consen  433 EQVVIKNLKNKVTKKLLLPESTDDIFYAGTGNLLLR--SPDSVTLFDVQQKKKVGSIKV---SKVKYVVWSNDMSRVALL  507 (1202)
T ss_pred             cceEEecccchhhhcccCcccccceeeccCccEEEE--cCCeEEEEEeecceEEEEEec---CceeEEEEcCccchhhhc
Confidence            00011111          112333444444444433  245689999998888877775   578888899887765544


Q ss_pred             e
Q psy17610        503 G  503 (515)
Q Consensus       503 ~  503 (515)
                      +
T Consensus       508 ~  508 (1202)
T KOG0292|consen  508 S  508 (1202)
T ss_pred             c
Confidence            3

>KOG0645|consensus

Probab=100.00  E-value=1.1e-39  Score=257.52  Aligned_cols=289  Identities=13%  Similarity=0.237  Sum_probs=244.5

Q ss_pred             EEEEEecCCCcEEEEEEecC-CCEEEEEecCceEEEEECCCCc--eeE-EeeccCccCeEEEEeCCCCcEEEEEecCCcE
Q psy17610         73 TALYLLKDDSGISSLQYNPV-NNKVFVGTVNCEIFLIDMNSGF--TLT-LVNTCHTSAIYDLQFPVNFSSVFATCSKNDI  148 (515)
Q Consensus        73 ~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~d~~i~iw~~~~~~--~~~-~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i  148 (515)
                      ....+.+|.+.+..+||+|. |..||+++.|..|++|+...+.  ... .+-.+|+..|.+++|+|.|++|++++.|.++
T Consensus         6 ~~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t~   85 (312)
T KOG0645|consen    6 LEQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDATV   85 (312)
T ss_pred             eEEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccceE
Confidence            34567789999999999997 8999999999999999998532  222 2345799999999999999999999999999


Q ss_pred             EEEeCCCC--ceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCc---eEEEecCCCCCCeEEEEEcCCCCE
Q psy17610        149 RIWSVRTL--NELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGK---LKFIIPNAHNRGVTALAITQDGTR  223 (515)
Q Consensus       149 ~iw~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~  223 (515)
                      .||.-..+  +++..+.+|...|.|++|+++|++||++++|..|.+|.+..+.   +...+ .+|...|..+.|+|...+
T Consensus        86 ~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL-~~HtqDVK~V~WHPt~dl  164 (312)
T KOG0645|consen   86 VIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVL-QEHTQDVKHVIWHPTEDL  164 (312)
T ss_pred             EEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeee-ccccccccEEEEcCCcce
Confidence            99987643  6788999999999999999999999999999999999987543   34444 799999999999999999


Q ss_pred             EEEecCCCcEEEEEcc-CCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEE
Q psy17610        224 LLSGGGEGQVRIWKLT-RESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAY  302 (515)
Q Consensus       224 l~~~~~d~~i~iw~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~  302 (515)
                      |++++.|.+|++|+-. .....+.+++.+|...|.+++|++.|..+++++.|+++++|...+.   ....+..+++.+.|
T Consensus       165 L~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~~---~~~~~sr~~Y~v~W  241 (312)
T KOG0645|consen  165 LFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYTD---LSGMHSRALYDVPW  241 (312)
T ss_pred             eEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeeccC---cchhcccceEeeee
Confidence            9999999999999876 6678889999999999999999999999999999999999986522   12233456788888


Q ss_pred             cCCCcEEEEEECCCeEEEEeCCCC------ceEEEEecCCCccEEEEEEcCC-CCEEEEEcCCCeEEEEEcc
Q psy17610        303 HPSEVQLITCSTNKMIDYWETCDG------SIIRSLEGSDVAAVNCVDFVDD-GKYFLTGGADQIVKMWMYR  367 (515)
Q Consensus       303 ~~~~~~l~~~~~~~~i~~~d~~~~------~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~i~i~d~~  367 (515)
                      .  ...+++++.|+.|++|.....      +.+......|...|++++|+|. .+.|++++.||.+++|.+.
T Consensus       242 ~--~~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~  311 (312)
T KOG0645|consen  242 D--NGVIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWELE  311 (312)
T ss_pred             c--ccceEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecCCCceEEEEEec
Confidence            8  668999999999999976542      2223333445579999999994 7789999999999999874

>KOG0265|consensus

Probab=100.00  E-value=2e-40  Score=265.57  Aligned_cols=287  Identities=17%  Similarity=0.287  Sum_probs=254.4

Q ss_pred             EEEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeC
Q psy17610         74 ALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSV  153 (515)
Q Consensus        74 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~  153 (515)
                      ...+.+|.+.|..+.|+|+|.+||+|+.|..|.+|++....+-...+++|.++|..+.|.+|++.+++++.|++++.||+
T Consensus        40 ~m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~  119 (338)
T KOG0265|consen   40 IMLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDA  119 (338)
T ss_pred             hhhcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEec
Confidence            34567899999999999999999999999999999976644555567799999999999999999999999999999999


Q ss_pred             CCCceeEEEEecCeEEEEEEEeeCCC-EEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCc
Q psy17610        154 RTLNELLRISVMNMICACIVFTYDGK-AILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQ  232 (515)
Q Consensus       154 ~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~  232 (515)
                      ++|+..+++++|..-|..+.-+.-|. .+.+++.|+++++||+++.+.++++  ....+++++.|..++..+.+|+-|+.
T Consensus       120 ~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~--~~kyqltAv~f~d~s~qv~sggIdn~  197 (338)
T KOG0265|consen  120 ETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTF--ENKYQLTAVGFKDTSDQVISGGIDND  197 (338)
T ss_pred             ccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhcc--ccceeEEEEEecccccceeeccccCc
Confidence            99999999999999999888554454 5568889999999999998888776  45678999999999999999999999


Q ss_pred             EEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccc----eEEEEEEcC-----ccEEEEEEc
Q psy17610        233 VRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKS----TRLIIMILP-----SMIMSAAYH  303 (515)
Q Consensus       233 i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~----~~~~~~~~~-----~~~~~~~~~  303 (515)
                      |++||++  .......+.+|.++|+.+..+|+|.++++-+.|.++++||++..    +++..+...     .....++|+
T Consensus       198 ikvWd~r--~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~csws  275 (338)
T KOG0265|consen  198 IKVWDLR--KNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWS  275 (338)
T ss_pred             eeeeccc--cCcceEEeecccCceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecchhhhhhhcceeecc
Confidence            9999995  45567789999999999999999999999999999999999753    335555433     347789999


Q ss_pred             CCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEE
Q psy17610        304 PSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWM  365 (515)
Q Consensus       304 ~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d  365 (515)
                      |++..+.+++.|..+++||......+..++++. +.|++++|+|...+|.+++.|.+|++=+
T Consensus       276 p~~~~i~ags~dr~vyvwd~~~r~~lyklpGh~-gsvn~~~Fhp~e~iils~~sdk~i~lge  336 (338)
T KOG0265|consen  276 PNGTKITAGSADRFVYVWDTTSRRILYKLPGHY-GSVNEVDFHPTEPIILSCSSDKTIYLGE  336 (338)
T ss_pred             CCCCccccccccceEEEeecccccEEEEcCCcc-eeEEEeeecCCCcEEEEeccCceeEeec
Confidence            999999999999999999999999999999987 9999999999999999999999988743

>KOG0284|consensus

Probab=100.00  E-value=3.1e-42  Score=287.13  Aligned_cols=282  Identities=23%  Similarity=0.419  Sum_probs=248.5

Q ss_pred             cCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCcee
Q psy17610        165 MNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQS  244 (515)
Q Consensus       165 ~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~  244 (515)
                      -..+|..+.|.|+|+.|++|+..|.+.+|+..+-.... +...|+.+|.++.|++++.++++|+.+|.|++|+.+.+   
T Consensus        95 vkc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fnFEt-ilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmn---  170 (464)
T KOG0284|consen   95 VKCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFNFET-ILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMN---  170 (464)
T ss_pred             cccceeeEEEcCCCceeEeecccccEEEecCceeeHHH-HhhhhcccceeEEEccCCCEEEEcCCCceEEecccchh---
Confidence            34578899999999999999999999999975443332 33789999999999999999999999999999997533   


Q ss_pred             eEEeecc-ccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCc-cEEEEEEcCCCcEEEEEECCCeEEEEe
Q psy17610        245 LQCVLKE-HTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPS-MIMSAAYHPSEVQLITCSTNKMIDYWE  322 (515)
Q Consensus       245 ~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~i~~~d  322 (515)
                      .+..+.+ |...|++++|+|+...|++++.||+|+|||....+....+..++ .+.++.|+|....+++++.|..|++||
T Consensus       171 nVk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWD  250 (464)
T KOG0284|consen  171 NVKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWD  250 (464)
T ss_pred             hhHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeEeec
Confidence            2333444 45999999999999999999999999999999888877776665 799999999999999999999999999


Q ss_pred             CCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECC-CCcEEEEEeCCC
Q psy17610        323 TCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISP-DKKVIVSVSADG  401 (515)
Q Consensus       323 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg  401 (515)
                      .++++++.++..|. ..|..+.|+|++++|++++.|..++++|+++.+.++.+++|...++++.|+| ...+|.+++.||
T Consensus       251 prSg~cl~tlh~HK-ntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dg  329 (464)
T KOG0284|consen  251 PRSGSCLATLHGHK-NTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTSGGSDG  329 (464)
T ss_pred             CCCcchhhhhhhcc-ceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeeccccccccceeeccCCC
Confidence            99999999999887 8999999999999999999999999999999999999999999999999999 667899999999


Q ss_pred             cEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEec
Q psy17610        402 GIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWET  470 (515)
Q Consensus       402 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~  470 (515)
                      .|..|.+...+                   ....+...|...|.+++|+|-|.+|++|+.|.++++|..
T Consensus       330 svvh~~v~~~~-------------------p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r  379 (464)
T KOG0284|consen  330 SVVHWVVGLEE-------------------PLGEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTR  379 (464)
T ss_pred             ceEEEeccccc-------------------cccCCCcccccceeeeeccccceeEeecCCCcceeeecc
Confidence            99999987322                   122233457788999999999999999999999999974

>KOG0284|consensus

Probab=100.00  E-value=3.1e-42  Score=287.18  Aligned_cols=294  Identities=16%  Similarity=0.288  Sum_probs=264.4

Q ss_pred             eccceEEEEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCc
Q psy17610         68 YSAGVTALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKND  147 (515)
Q Consensus        68 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~  147 (515)
                      +..++.......-..+|..|.|.|+|+.|++|+..|...+|+..+ .....+++.|..+|.++.|++++.+++++..+|.
T Consensus        83 ~~tKf~h~s~NKvkc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~-fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~  161 (464)
T KOG0284|consen   83 FTTKFVHTSSNKVKCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTS-FNFETILQAHDSPVRTMKWSHNGTWMISGDKGGM  161 (464)
T ss_pred             cccceEeccccccccceeeEEEcCCCceeEeecccccEEEecCce-eeHHHHhhhhcccceeEEEccCCCEEEEcCCCce
Confidence            344555555556678999999999999999999999999999966 6777788899999999999999999999999999


Q ss_pred             EEEEeCCCCceeEEEEecC-eEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEE
Q psy17610        148 IRIWSVRTLNELLRISVMN-MICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLS  226 (515)
Q Consensus       148 i~iw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  226 (515)
                      |++|+..- ..++.++.|. ..|++++|+|+...+++++.||+|+|||....+....+ .+|.-.|.++.|+|....+++
T Consensus       162 iKyWqpnm-nnVk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL-~GHgwdVksvdWHP~kgLias  239 (464)
T KOG0284|consen  162 IKYWQPNM-NNVKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVL-RGHGWDVKSVDWHPTKGLIAS  239 (464)
T ss_pred             EEecccch-hhhHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhhee-ccCCCCcceeccCCccceeEE
Confidence            99999753 4555555555 89999999999999999999999999999988887777 799999999999999999999


Q ss_pred             ecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEE-cCccEEEEEEcC-
Q psy17610        227 GGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMI-LPSMIMSAAYHP-  304 (515)
Q Consensus       227 ~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~-  304 (515)
                      |+.|..|++||.  .+..++.++.+|+..|..+.|++++++|++++.|..++++|+++.+.+..+. +...+.+++|+| 
T Consensus       240 gskDnlVKlWDp--rSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~  317 (464)
T KOG0284|consen  240 GSKDNLVKLWDP--RSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPL  317 (464)
T ss_pred             ccCCceeEeecC--CCcchhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeeccccc
Confidence            999999999999  5677888999999999999999999999999999999999999888888777 556899999999 


Q ss_pred             CCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEc
Q psy17610        305 SEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMY  366 (515)
Q Consensus       305 ~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~  366 (515)
                      ....|.+++.||.+..|.+...+++..+...+...|.+++|+|-|.+|++|+.|.++++|.-
T Consensus       318 ~~~lftsgg~Dgsvvh~~v~~~~p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r  379 (464)
T KOG0284|consen  318 NESLFTSGGSDGSVVHWVVGLEEPLGEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTR  379 (464)
T ss_pred             cccceeeccCCCceEEEeccccccccCCCcccccceeeeeccccceeEeecCCCcceeeecc
Confidence            46778889999999999999888888888888899999999999999999999999999975

>KOG1539|consensus

Probab=100.00  E-value=9e-39  Score=289.86  Aligned_cols=438  Identities=15%  Similarity=0.190  Sum_probs=356.0

Q ss_pred             CCCceEEEecCCCCeEEEEcCCC-C------CCcccccccceEEee---ccccccccccccccccccCcceeeeccceEE
Q psy17610          5 PNDEFAYCGTTSGDILKLNLNYP-S------DLSKVESDTAAVLMG---CYGKLIKKKVSTKLKDVNAEDVSLYSAGVTA   74 (515)
Q Consensus         5 ~~~~~~~~g~~~g~i~~~~~~~~-~------~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (515)
                      +-|+.++.++.++.+.+|+.... .      .+...+.+.+..++.   ..+++..+...+.+++||..+.++      .
T Consensus       122 ~fGe~lia~d~~~~l~vw~~s~~~~e~~l~~~~~~~~~~~Ital~HP~TYLNKIvvGs~~G~lql~Nvrt~K~------v  195 (910)
T KOG1539|consen  122 PFGEHLIAVDISNILFVWKTSSIQEELYLQSTFLKVEGDFITALLHPSTYLNKIVVGSSQGRLQLWNVRTGKV------V  195 (910)
T ss_pred             eecceEEEEEccCcEEEEEeccccccccccceeeeccCCceeeEecchhheeeEEEeecCCcEEEEEeccCcE------E
Confidence            55788999999999999998763 1      112222222322222   447888889999999999976554      4


Q ss_pred             EEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec-CCcEEEEeC
Q psy17610         75 LYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS-KNDIRIWSV  153 (515)
Q Consensus        75 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~  153 (515)
                      ..+.++...|+++.-+|--+.+|.|..+|+|.+++++.++.+..+.. ..++|++++|..||..+++++. .|.+.+||+
T Consensus       196 ~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~sFk~-d~g~VtslSFrtDG~p~las~~~~G~m~~wDL  274 (910)
T KOG1539|consen  196 YTFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDKILMSFKQ-DWGRVTSLSFRTDGNPLLASGRSNGDMAFWDL  274 (910)
T ss_pred             EEecccccceeEeccCCcceEEEEeccCceEEEEEcccCcEEEEEEc-cccceeEEEeccCCCeeEEeccCCceEEEEEc
Confidence            55667889999999999999999999999999999999766665542 2599999999999987777666 699999999


Q ss_pred             CCCceeEEEE-ecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCce---EEEecCCCCCCeEEEEEc-CCCCEEEEec
Q psy17610        154 RTLNELLRIS-VMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKL---KFIIPNAHNRGVTALAIT-QDGTRLLSGG  228 (515)
Q Consensus       154 ~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~---~~~~~~~~~~~v~~~~~~-~~~~~l~~~~  228 (515)
                      +..+....+. .|.+.+....|.|....+++++.|..+++|=.+++.-   ......+|..+..++.|. .+|..+.+++
T Consensus       275 e~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg~pR~LR~R~GHs~Pp~~irfy~~~g~~ilsa~  354 (910)
T KOG1539|consen  275 EKKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSGDGVPRLLRSRGGHSAPPSCIRFYGSQGHFILSAK  354 (910)
T ss_pred             CCCeeeeeeeccccCCcccceecCCCceEeeccCCCceeEEEeeCCCCcchheeeccCCCCCchheeeeccCcEEEEecc
Confidence            9887776666 7888899999999999999999999998886554432   223447999999999998 5889999999


Q ss_pred             CCCcEEEEEccCCce--------------------------ee-------------------------------------
Q psy17610        229 GEGQVRIWKLTRESQ--------------------------SL-------------------------------------  245 (515)
Q Consensus       229 ~d~~i~iw~~~~~~~--------------------------~~-------------------------------------  245 (515)
                      .|++.+.+++.....                          +.                                     
T Consensus       355 ~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~  434 (910)
T KOG1539|consen  355 QDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTS  434 (910)
T ss_pred             cCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhhhcceeEEecCcceEEEEeccCccc
Confidence            999888887631100                          00                                     


Q ss_pred             -EEee-----ccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEE----EcCccEEEEEEcCCCcEEEEEECC
Q psy17610        246 -QCVL-----KEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIM----ILPSMIMSAAYHPSEVQLITCSTN  315 (515)
Q Consensus       246 -~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~  315 (515)
                       ...+     +.....+++++.++.|++.+.|...|.|-+|++.++-....+    .+..++..++...-++.+++++.+
T Consensus       435 G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~  514 (910)
T KOG1539|consen  435 GRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGAD  514 (910)
T ss_pred             ccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEcccCeeecccccCccccCceeEEEecCCCceEEEccCc
Confidence             0000     012256788999999999999999999999999999888887    566789999999999999999999


Q ss_pred             CeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEE
Q psy17610        316 KMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIV  395 (515)
Q Consensus       316 ~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~  395 (515)
                      |.+.+||......+..+...  ..+.++..+.....++.+..|-.|+++|..+.+.++.+.+|.+.|++++|||||++|+
T Consensus       515 Gilkfw~f~~k~l~~~l~l~--~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWli  592 (910)
T KOG1539|consen  515 GILKFWDFKKKVLKKSLRLG--SSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLI  592 (910)
T ss_pred             ceEEEEecCCcceeeeeccC--CCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEE
Confidence            99999999999988888876  5788888988888999999999999999999999999999999999999999999999


Q ss_pred             EEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecC-CeEEEEecCC
Q psy17610        396 SVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTN-KMIDYWETCD  472 (515)
Q Consensus       396 ~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-g~v~iwd~~~  472 (515)
                      +++.|++|++||+.+...                     .-....+.+.+++.|||+|.+||+...| .-|++|.-.+
T Consensus       593 sasmD~tIr~wDlpt~~l---------------------ID~~~vd~~~~sls~SPngD~LAT~Hvd~~gIylWsNks  649 (910)
T KOG1539|consen  593 SASMDSTIRTWDLPTGTL---------------------IDGLLVDSPCTSLSFSPNGDFLATVHVDQNGIYLWSNKS  649 (910)
T ss_pred             EeecCCcEEEEeccCcce---------------------eeeEecCCcceeeEECCCCCEEEEEEecCceEEEEEchh
Confidence            999999999999987641                     1111234568899999999999999988 5699997544

>KOG0293|consensus

Probab=100.00  E-value=9.6e-41  Score=278.69  Aligned_cols=292  Identities=18%  Similarity=0.259  Sum_probs=257.3

Q ss_pred             eEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCc---eeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEE
Q psy17610        116 LTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLN---ELLRISVMNMICACIVFTYDGKAILSGWNDGFIRC  192 (515)
Q Consensus       116 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~  192 (515)
                      ...++..|.+.|.-+.||++|++|++++.|.+..+|.+....   ..+++.+|..+|..+.||||.++|++++.+..+.+
T Consensus       216 t~qil~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~l  295 (519)
T KOG0293|consen  216 TWQILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSL  295 (519)
T ss_pred             hhhhHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHheee
Confidence            345677899999999999999999999999999999886544   47788899999999999999999999999999999


Q ss_pred             EecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccc-cCceEEEEEecCCCEEEEE
Q psy17610        193 FTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEH-TSSVSVIQIKSDSKEAMSA  271 (515)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~  271 (515)
                      ||+.+|.....++.++...+.+.+|.|||..+++|+.|+.+..||++.+.   ....++- ...|.+++..+||+++++.
T Consensus       296 wDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn~---~~~W~gvr~~~v~dlait~Dgk~vl~v  372 (519)
T KOG0293|consen  296 WDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDGNI---LGNWEGVRDPKVHDLAITYDGKYVLLV  372 (519)
T ss_pred             ccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCCcch---hhcccccccceeEEEEEcCCCcEEEEE
Confidence            99999999998877778899999999999999999999999999996432   2223322 3568999999999999999


Q ss_pred             eCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCcc-EEEEEEc-CCC
Q psy17610        272 STDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAA-VNCVDFV-DDG  349 (515)
Q Consensus       272 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~-i~~~~~~-~~~  349 (515)
                      +.|..+++++.++......+....++++.+.+.+++++++.-.+..+++||++....++++.++..+. +-.-+|- .+.
T Consensus       373 ~~d~~i~l~~~e~~~dr~lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~  452 (519)
T KOG0293|consen  373 TVDKKIRLYNREARVDRGLISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGND  452 (519)
T ss_pred             ecccceeeechhhhhhhccccccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEeccCCCCc
Confidence            99999999999988888788889999999999999999999999999999999988888888775332 2223343 356


Q ss_pred             CEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECC-CCcEEEEEeCCCcEEEEeCCC
Q psy17610        350 KYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISP-DKKVIVSVSADGGIFLWTFPE  410 (515)
Q Consensus       350 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iw~~~~  410 (515)
                      .++++|++|+.|+||+..+++++..+.+|...|++++|+| +..++|+++.||+|+||....
T Consensus       453 ~fiaSGSED~kvyIWhr~sgkll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~~  514 (519)
T KOG0293|consen  453 KFIASGSEDSKVYIWHRISGKLLAVLSGHSKTVNCVSWNPADPEMFASASDDGTIRIWGPSD  514 (519)
T ss_pred             ceEEecCCCceEEEEEccCCceeEeecCCcceeeEEecCCCCHHHhhccCCCCeEEEecCCc
Confidence            8999999999999999999999999999999999999999 667899999999999998754

>KOG0265|consensus

Probab=100.00  E-value=6.5e-40  Score=262.68  Aligned_cols=289  Identities=20%  Similarity=0.351  Sum_probs=248.7

Q ss_pred             CCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccc
Q psy17610        206 NAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKS  285 (515)
Q Consensus       206 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~  285 (515)
                      .+|.+.|..+.|+|+|..|++|+.|..|.+|+.. +..+....+++|++.|..+.|.+|++.+++++.|.+++.||++++
T Consensus        44 ~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~-gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG  122 (338)
T KOG0265|consen   44 PGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVY-GDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETG  122 (338)
T ss_pred             CCCcceEEEEEECCCCCeEeecCCcceEEEEecc-ccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEecccc
Confidence            6899999999999999999999999999999975 344556678899999999999999999999999999999999999


Q ss_pred             eEEEEEEcCcc-EEEEEEcCCC-cEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEE
Q psy17610        286 TRLIIMILPSM-IMSAAYHPSE-VQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKM  363 (515)
Q Consensus       286 ~~~~~~~~~~~-~~~~~~~~~~-~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i  363 (515)
                      +....+..+.. +.++....-| .++.+++.|+++++||+++...+++++..  ..++++.|...+..+.+|+-|+.|++
T Consensus       123 ~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~k--yqltAv~f~d~s~qv~sggIdn~ikv  200 (338)
T KOG0265|consen  123 KRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENK--YQLTAVGFKDTSDQVISGGIDNDIKV  200 (338)
T ss_pred             eeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccccc--eeEEEEEecccccceeeccccCceee
Confidence            99999887765 4555533344 45567788999999999999999888765  78999999999999999999999999


Q ss_pred             EEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCccc
Q psy17610        364 WMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSM  443 (515)
Q Consensus       364 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  443 (515)
                      ||++.+.....+.+|.++|+.+..+|+|.++.+-+.|.++++||++...............            .......
T Consensus       201 Wd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~------------~hnfekn  268 (338)
T KOG0265|consen  201 WDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGH------------IHNFEKN  268 (338)
T ss_pred             eccccCcceEEeecccCceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecc------------hhhhhhh
Confidence            9999999999999999999999999999999999999999999998653211100000000            0011233


Q ss_pred             EEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEEE
Q psy17610        444 IMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKI  510 (515)
Q Consensus       444 i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~i  510 (515)
                      ...++|+|+++.+.+|+.|..+++||..+...+..+++|. +.|++++|+|...+|.+++.|.+|.+
T Consensus       269 lL~cswsp~~~~i~ags~dr~vyvwd~~~r~~lyklpGh~-gsvn~~~Fhp~e~iils~~sdk~i~l  334 (338)
T KOG0265|consen  269 LLKCSWSPNGTKITAGSADRFVYVWDTTSRRILYKLPGHY-GSVNEVDFHPTEPIILSCSSDKTIYL  334 (338)
T ss_pred             cceeeccCCCCccccccccceEEEeecccccEEEEcCCcc-eeEEEeeecCCCcEEEEeccCceeEe
Confidence            6678999999999999999999999999989999999998 99999999999999999999999876

>KOG0276|consensus

Probab=100.00  E-value=5.3e-39  Score=282.18  Aligned_cols=283  Identities=17%  Similarity=0.232  Sum_probs=262.5

Q ss_pred             eccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCc
Q psy17610        120 NTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGK  199 (515)
Q Consensus       120 ~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~  199 (515)
                      +..+...|.++.|+|..+.++++-..|.|.|||.++...++.+.....+|.+..|-+..+++++|+.|..|++|+..+++
T Consensus         9 ~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfnynt~e   88 (794)
T KOG0276|consen    9 FQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYNTGE   88 (794)
T ss_pred             hhccCCceeeeecCCCCceEEEeeecCeeEEEecccceeeeeeeecccchhhheeeeccceEEEecCCceEEEEecccce
Confidence            34488999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEec-CCCEEEEEeCCCcEE
Q psy17610        200 LKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKS-DSKEAMSASTDGTCV  278 (515)
Q Consensus       200 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~  278 (515)
                      .+..+ .+|...|.+++.+|...++++++.|-.|++||.+ ....+.+++.+|...|.+++|+| |.+.+++++-|++|+
T Consensus        89 kV~~F-eAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we-~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVK  166 (794)
T KOG0276|consen   89 KVKTF-EAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWE-NEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVK  166 (794)
T ss_pred             eeEEe-eccccceeeeeecCCCCeEEecCCccEEEEeecc-CceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEE
Confidence            99999 7999999999999999999999999999999997 56888999999999999999998 677899999999999


Q ss_pred             EEEcccceEEEEEEcC-ccEEEEEEcCC--CcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEE
Q psy17610        279 LWDLIKSTRLIIMILP-SMIMSAAYHPS--EVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTG  355 (515)
Q Consensus       279 iwd~~~~~~~~~~~~~-~~~~~~~~~~~--~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~  355 (515)
                      +|.+.+..+..++..+ ..+.++.+-+.  ..++++|+.|..+++||.++.++++++++|. ..|..+.|+|.-.++++|
T Consensus       167 VWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt-~Nvs~v~fhp~lpiiisg  245 (794)
T KOG0276|consen  167 VWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHT-NNVSFVFFHPELPIIISG  245 (794)
T ss_pred             EEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhccc-ccceEEEecCCCcEEEEe
Confidence            9999998888888755 47999999874  4799999999999999999999999999987 899999999999999999


Q ss_pred             cCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEE
Q psy17610        356 GADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFL  405 (515)
Q Consensus       356 ~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i  405 (515)
                      ++||+++||+..+-++..++.-.-+.+.+++-.+.++.++.|..+|.+.+
T Consensus       246 sEDGTvriWhs~Ty~lE~tLn~gleRvW~I~~~k~~~~i~vG~Deg~i~v  295 (794)
T KOG0276|consen  246 SEDGTVRIWNSKTYKLEKTLNYGLERVWCIAAHKGDGKIAVGFDEGSVTV  295 (794)
T ss_pred             cCCccEEEecCcceehhhhhhcCCceEEEEeecCCCCeEEEeccCCcEEE
Confidence            99999999999988887777777789999999998888998887776644

>KOG0645|consensus

Probab=100.00  E-value=1.1e-38  Score=251.89  Aligned_cols=292  Identities=17%  Similarity=0.237  Sum_probs=243.2

Q ss_pred             eeEEEEecCeEEEEEEEeeC-CCEEEEEeCCCeEEEEecCC---CceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcE
Q psy17610        158 ELLRISVMNMICACIVFTYD-GKAILSGWNDGFIRCFTPQS---GKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQV  233 (515)
Q Consensus       158 ~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i  233 (515)
                      .++.+++|.+++..++|+|- |..|++++.|..|++|+...   -.+...+..+|...|.+++|+|.|++|++++.|.++
T Consensus         6 ~~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t~   85 (312)
T KOG0645|consen    6 LEQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDATV   85 (312)
T ss_pred             eEEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccceE
Confidence            45677889999999999998 88999999999999999885   344555667899999999999999999999999999


Q ss_pred             EEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEE
Q psy17610        234 RIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCS  313 (515)
Q Consensus       234 ~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  313 (515)
                      .||.-.....+....+++|...|.+++|+++|++|++++.|+.|-+|.+.....                          
T Consensus        86 ~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddE--------------------------  139 (312)
T KOG0645|consen   86 VIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDE--------------------------  139 (312)
T ss_pred             EEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCc--------------------------
Confidence            999987778888999999999999999999999999999999999998753221                          


Q ss_pred             CCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccC---CeeeeeccCCCCCeeEEEECCC
Q psy17610        314 TNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYRE---GVPCFVGIGHAASITKIKISPD  390 (515)
Q Consensus       314 ~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~---~~~~~~~~~~~~~i~~~~~~~~  390 (515)
                                  -++...+..|. ..|..+.|+|...+|++++.|++|++|+-..   -+++.++.+|...|.+++|+|.
T Consensus       140 ------------fec~aVL~~Ht-qDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~  206 (312)
T KOG0645|consen  140 ------------FECIAVLQEHT-QDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNI  206 (312)
T ss_pred             ------------EEEEeeecccc-ccccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCC
Confidence                        12223334443 7788899999999999999999999998762   3678999999999999999999


Q ss_pred             CcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEec
Q psy17610        391 KKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWET  470 (515)
Q Consensus       391 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~  470 (515)
                      |..|++++.|++++||.....                        ....|...+..+.|.  ...||+++.|+.|++|..
T Consensus       207 G~rl~s~sdD~tv~Iw~~~~~------------------------~~~~~sr~~Y~v~W~--~~~IaS~ggD~~i~lf~~  260 (312)
T KOG0645|consen  207 GSRLVSCSDDGTVSIWRLYTD------------------------LSGMHSRALYDVPWD--NGVIASGGGDDAIRLFKE  260 (312)
T ss_pred             CceEEEecCCcceEeeeeccC------------------------cchhcccceEeeeec--ccceEeccCCCEEEEEEe
Confidence            999999999999999985421                        111244558888887  568999999999999986


Q ss_pred             CCC------eeeeeecccccceEEEEEEcCC-CcEEEEeecCCeEEEEEEe
Q psy17610        471 CDG------SIIRSLEGSDVAAVNCVDFVDD-GKYFLTGGADQIVKICLYI  514 (515)
Q Consensus       471 ~~~------~~~~~~~~~~~~~v~~~~~s~~-~~~l~s~~~dg~v~iw~~~  514 (515)
                      ...      +++....+.|...|++++|.|. ..+|++|++||.|++|.+.
T Consensus       261 s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~  311 (312)
T KOG0645|consen  261 SDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWELE  311 (312)
T ss_pred             cCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecCCCceEEEEEec
Confidence            643      2233333444479999999995 6789999999999999874

>KOG0263|consensus

Probab=100.00  E-value=5.2e-40  Score=296.99  Aligned_cols=284  Identities=18%  Similarity=0.304  Sum_probs=244.4

Q ss_pred             eEEEEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEE
Q psy17610         72 VTALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIW  151 (515)
Q Consensus        72 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw  151 (515)
                      +....+......++|..|++|+.+||.|..|..|++|.+.. +++....  +...+         ..+=+.+.|-.+.+.
T Consensus       369 ic~YT~~nt~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p-~kl~~lk--~~~~l---------~~~d~~sad~~~~~~  436 (707)
T KOG0263|consen  369 ICMYTFHNTYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTP-KKLKKLK--DASDL---------SNIDTESADVDVDML  436 (707)
T ss_pred             EEEEEEEEcCCcceeEeecCCcchhhccccccEEEEEecch-hhhcccc--chhhh---------ccccccccchhhhhc
Confidence            34445556678999999999999999999999999999987 3433322  21111         122233445557778


Q ss_pred             eCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCC
Q psy17610        152 SVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEG  231 (515)
Q Consensus       152 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~  231 (515)
                      |-.+.....++.+|.++|..+.|+|+.++|+++++|+++++|.+.+......+ .+|..+|..+.|+|.|-++|+++.|+
T Consensus       437 D~~~~~~~~~L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y-~GH~~PVwdV~F~P~GyYFatas~D~  515 (707)
T KOG0263|consen  437 DDDSSGTSRTLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIY-KGHLAPVWDVQFAPRGYYFATASHDQ  515 (707)
T ss_pred             cccCCceeEEeecCCCceeeeeecccccceeeccCCcceeeeecccceeEEEe-cCCCcceeeEEecCCceEEEecCCCc
Confidence            88888888889999999999999999999999999999999999999998888 69999999999999999999999999


Q ss_pred             cEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEE
Q psy17610        232 QVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLIT  311 (515)
Q Consensus       232 ~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  311 (515)
                      +-++|...  ...+.+.+.+|.+.|.|+.|+|+..++++|+.|.++++||+.++..                        
T Consensus       516 tArLWs~d--~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~------------------------  569 (707)
T KOG0263|consen  516 TARLWSTD--HNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNS------------------------  569 (707)
T ss_pred             eeeeeecc--cCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcE------------------------
Confidence            99999984  4667778899999999999999999999999999999998865543                        


Q ss_pred             EECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCC
Q psy17610        312 CSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDK  391 (515)
Q Consensus       312 ~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~  391 (515)
                                       ++.+.+|. ++|.+++|+|+|++|++|+.||.|.+||+.+++++..+.+|.+.|.++.|+.||
T Consensus       570 -----------------VRiF~GH~-~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg  631 (707)
T KOG0263|consen  570 -----------------VRIFTGHK-GPVTALAFSPCGRYLASGDEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDG  631 (707)
T ss_pred             -----------------EEEecCCC-CceEEEEEcCCCceEeecccCCcEEEEEcCCCcchhhhhcccCceeEEEEecCC
Confidence                             33334544 999999999999999999999999999999999999999999999999999999


Q ss_pred             cEEEEEeCCCcEEEEeCCCCc
Q psy17610        392 KVIVSVSADGGIFLWTFPELE  412 (515)
Q Consensus       392 ~~l~~~~~dg~i~iw~~~~~~  412 (515)
                      ..||+++.|.+|++||+....
T Consensus       632 ~vLasgg~DnsV~lWD~~~~~  652 (707)
T KOG0263|consen  632 NVLASGGADNSVRLWDLTKVI  652 (707)
T ss_pred             CEEEecCCCCeEEEEEchhhc
Confidence            999999999999999987643

>KOG0285|consensus

Probab=100.00  E-value=9.6e-40  Score=267.83  Aligned_cols=291  Identities=20%  Similarity=0.344  Sum_probs=262.7

Q ss_pred             ceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEE
Q psy17610        114 FTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCF  193 (515)
Q Consensus       114 ~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~  193 (515)
                      .++...+.+|.+.|.|+++.|.+.++++++.|++++|||+.+|+...++.+|-..|..+++++...|+++++.|+.|+.|
T Consensus       141 wKl~rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCw  220 (460)
T KOG0285|consen  141 WKLYRVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCW  220 (460)
T ss_pred             ceehhhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEEE
Confidence            34556788999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeC
Q psy17610        194 TPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST  273 (515)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  273 (515)
                      |++..+.+..+ .+|-..|.|++.+|.-+.|++|+.|..+++||++  ....+..+.+|..+|..+.+.|-...+++++.
T Consensus       221 DLe~nkvIR~Y-hGHlS~V~~L~lhPTldvl~t~grDst~RvWDiR--tr~~V~~l~GH~~~V~~V~~~~~dpqvit~S~  297 (460)
T KOG0285|consen  221 DLEYNKVIRHY-HGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIR--TRASVHVLSGHTNPVASVMCQPTDPQVITGSH  297 (460)
T ss_pred             echhhhhHHHh-ccccceeEEEeccccceeEEecCCcceEEEeeec--ccceEEEecCCCCcceeEEeecCCCceEEecC
Confidence            99999999888 7999999999999999999999999999999995  55678889999999999999998889999999


Q ss_pred             CCcEEEEEcccceEEEEEEcCc-cEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEE
Q psy17610        274 DGTCVLWDLIKSTRLIIMILPS-MIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYF  352 (515)
Q Consensus       274 d~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l  352 (515)
                      |++|++||++.++....+.++. .+.+++.+|....+++++.| .|+-|++..+..+..+.++. ..+++++.+.|+ ++
T Consensus       298 D~tvrlWDl~agkt~~tlt~hkksvral~lhP~e~~fASas~d-nik~w~~p~g~f~~nlsgh~-~iintl~~nsD~-v~  374 (460)
T KOG0285|consen  298 DSTVRLWDLRAGKTMITLTHHKKSVRALCLHPKENLFASASPD-NIKQWKLPEGEFLQNLSGHN-AIINTLSVNSDG-VL  374 (460)
T ss_pred             CceEEEeeeccCceeEeeecccceeeEEecCCchhhhhccCCc-cceeccCCccchhhcccccc-ceeeeeeeccCc-eE
Confidence            9999999999998887776654 79999999999999988776 58999999999999987776 889999999876 78


Q ss_pred             EEEcCCCeEEEEEccCCeeeeecc--------CCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCC
Q psy17610        353 LTGGADQIVKMWMYREGVPCFVGI--------GHAASITKIKISPDKKVIVSVSADGGIFLWTFPE  410 (515)
Q Consensus       353 ~~~~~dg~i~i~d~~~~~~~~~~~--------~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~  410 (515)
                      ++|+++|.+.+||.++|-..+...        ..+..|.+.+|...+..|++|..|.+|++|.-..
T Consensus       375 ~~G~dng~~~fwdwksg~nyQ~~~t~vqpGSl~sEagI~as~fDktg~rlit~eadKtIk~~keDe  440 (460)
T KOG0285|consen  375 VSGGDNGSIMFWDWKSGHNYQRGQTIVQPGSLESEAGIFASCFDKTGSRLITGEADKTIKMYKEDE  440 (460)
T ss_pred             EEcCCceEEEEEecCcCcccccccccccCCccccccceeEEeecccCceEEeccCCcceEEEeccc
Confidence            899999999999999885544431        2346789999999999999999999999997543

>KOG0295|consensus

Probab=100.00  E-value=1.5e-39  Score=267.25  Aligned_cols=283  Identities=21%  Similarity=0.357  Sum_probs=259.9

Q ss_pred             CCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEccc-
Q psy17610        206 NAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIK-  284 (515)
Q Consensus       206 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~-  284 (515)
                      .+|..+|+.+-|+|+-..++++++|++|++||.  .++++...+++|.+.+..+.|+..|+++++++.|-.+.+||..+ 
T Consensus       105 ~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~--~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~~  182 (406)
T KOG0295|consen  105 AGHRSSVTRVIFHPSEALVVSASEDATIKVFDT--ETGELERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDFDTF  182 (406)
T ss_pred             hccccceeeeeeccCceEEEEecCCceEEEEEc--cchhhhhhhhccccceeEEEEecCccEEEecCCccchhheeHHHH
Confidence            579999999999999999999999999999999  55666888999999999999999999999999998899999987 


Q ss_pred             ceEEEEE-EcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEE
Q psy17610        285 STRLIIM-ILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKM  363 (515)
Q Consensus       285 ~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i  363 (515)
                      .++++.. .+...+.+++|-|.+.++++++.|.+|+.|+..++.++.++.++. ..+..++.+.||.++|+++.|.++++
T Consensus       183 ~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~~h~-ewvr~v~v~~DGti~As~s~dqtl~v  261 (406)
T KOG0295|consen  183 FRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFPGHS-EWVRMVRVNQDGTIIASCSNDQTLRV  261 (406)
T ss_pred             HHHHHHhcCcccceeeEEEEecCCeeeecccccceeEEecccceeEEeccCch-HhEEEEEecCCeeEEEecCCCceEEE
Confidence            3444433 444579999999999999999999999999999999999999987 79999999999999999999999999


Q ss_pred             EEccCCeeeeeccCCCCCeeEEEECCC---------------CcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecc
Q psy17610        364 WMYREGVPCFVGIGHAASITKIKISPD---------------KKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRS  428 (515)
Q Consensus       364 ~d~~~~~~~~~~~~~~~~i~~~~~~~~---------------~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~  428 (515)
                      |-+.++++...++.|+.+|.+++|.|.               ++++.+++.|++|++||+..+                 
T Consensus       262 W~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg-----------------  324 (406)
T KOG0295|consen  262 WVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTG-----------------  324 (406)
T ss_pred             EEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCC-----------------
Confidence            999999999999999999999999773               359999999999999999875                 


Q ss_pred             cccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeE
Q psy17610        429 TARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIV  508 (515)
Q Consensus       429 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v  508 (515)
                         .....+.+|..+|..++|+|.|+||+++.+|+++++||++++++.+.++.|. .-+++++|+.+-.+++||+-|.++
T Consensus       325 ---~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~-hfvt~lDfh~~~p~VvTGsVdqt~  400 (406)
T KOG0295|consen  325 ---MCLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEAHE-HFVTSLDFHKTAPYVVTGSVDQTV  400 (406)
T ss_pred             ---eEEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCCCc-ceeEEEecCCCCceEEecccccee
Confidence               3455677899999999999999999999999999999999999999999887 899999999999999999999999


Q ss_pred             EEEE
Q psy17610        509 KICL  512 (515)
Q Consensus       509 ~iw~  512 (515)
                      ++|.
T Consensus       401 KvwE  404 (406)
T KOG0295|consen  401 KVWE  404 (406)
T ss_pred             eeee
Confidence            9996

>KOG0263|consensus

Probab=100.00  E-value=3.1e-39  Score=292.01  Aligned_cols=269  Identities=19%  Similarity=0.300  Sum_probs=226.6

Q ss_pred             ccCCCCceEEEecCCCCeEEEEcCCCCCCcccccccceEEeeccccccccccccccccccCcceeeeccceEEEEEecCC
Q psy17610          2 KTTPNDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMGCYGKLIKKKVSTKLKDVNAEDVSLYSAGVTALYLLKDD   81 (515)
Q Consensus         2 ~~~~~~~~~~~g~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (515)
                      .|++|...|++|..+-.|.+|.+...+....-....-       ..+-....+-....-+      -..+.....+.+|.
T Consensus       385 ~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l-------~~~d~~sad~~~~~~D------~~~~~~~~~L~GH~  451 (707)
T KOG0263|consen  385 EFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDL-------SNIDTESADVDVDMLD------DDSSGTSRTLYGHS  451 (707)
T ss_pred             eecCCcchhhccccccEEEEEecchhhhccccchhhh-------ccccccccchhhhhcc------ccCCceeEEeecCC
Confidence            5899999999999999999999886421111111000       0000000000001111      12334556699999


Q ss_pred             CcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEE
Q psy17610         82 SGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLR  161 (515)
Q Consensus        82 ~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~  161 (515)
                      ++|..+.|+|+.++|++++.|+++++|.+.+ ......+.||..||..+.|+|.|-++++++.|++.++|..+...+++.
T Consensus       452 GPVyg~sFsPd~rfLlScSED~svRLWsl~t-~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~~PlRi  530 (707)
T KOG0263|consen  452 GPVYGCSFSPDRRFLLSCSEDSSVRLWSLDT-WSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHNKPLRI  530 (707)
T ss_pred             CceeeeeecccccceeeccCCcceeeeeccc-ceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeecccCCchhh
Confidence            9999999999999999999999999999999 566667789999999999999999999999999999999999999999


Q ss_pred             EEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCC
Q psy17610        162 ISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRE  241 (515)
Q Consensus       162 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~  241 (515)
                      +.+|...|.|+.|+|+..|+++|+.|.++++||+.+|..++.+ .+|.++|.+++|+|+|++|++|+.||.|.+||+  .
T Consensus       531 faghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF-~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl--~  607 (707)
T KOG0263|consen  531 FAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIF-TGHKGPVTALAFSPCGRYLASGDEDGLIKIWDL--A  607 (707)
T ss_pred             hcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEe-cCCCCceEEEEEcCCCceEeecccCCcEEEEEc--C
Confidence            9999999999999999999999999999999999999999988 799999999999999999999999999999999  5


Q ss_pred             ceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceE
Q psy17610        242 SQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTR  287 (515)
Q Consensus       242 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~  287 (515)
                      ....+..+.+|++.|.++.|+.+|..|++++.|.+|++||+.....
T Consensus       608 ~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~~~  653 (707)
T KOG0263|consen  608 NGSLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTKVIE  653 (707)
T ss_pred             CCcchhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEchhhcc
Confidence            6677888999999999999999999999999999999999865443

>KOG0278|consensus

Probab=100.00  E-value=9.9e-40  Score=254.78  Aligned_cols=291  Identities=20%  Similarity=0.259  Sum_probs=267.0

Q ss_pred             eEEeeccCccCeEEEEeCC---CCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEE
Q psy17610        116 LTLVNTCHTSAIYDLQFPV---NFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRC  192 (515)
Q Consensus       116 ~~~~~~~h~~~v~~~~~~~---~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~  192 (515)
                      ....-.||..+|..++|||   +|-+|+++|.|+.-.+-+-++|.-+-++.+|.+.|....+..+....++++.|=+-++
T Consensus         6 ~pl~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~na~~aasaaadftakv   85 (334)
T KOG0278|consen    6 TPLTCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKV   85 (334)
T ss_pred             CceEEcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcEEeeeccCcceeeeecCchhhhhhhhcccchhhh
Confidence            3445678999999999975   8889999999999999999999999999999999999999998888899999999999


Q ss_pred             EecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEe
Q psy17610        193 FTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAS  272 (515)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  272 (515)
                      ||.-+|..+..+  .|..-|.+++|+.|.++|++|+.+..+++||+++... +...+.+|.+.|..+.|....+.+++++
T Consensus        86 w~a~tgdelhsf--~hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~A-pp~E~~ghtg~Ir~v~wc~eD~~iLSSa  162 (334)
T KOG0278|consen   86 WDAVTGDELHSF--EHKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKA-PPKEISGHTGGIRTVLWCHEDKCILSSA  162 (334)
T ss_pred             hhhhhhhhhhhh--hhhheeeeEEecccchhhhccchHHHhhhhhccCCCC-CchhhcCCCCcceeEEEeccCceEEeec
Confidence            999999998887  6888899999999999999999999999999985543 4456889999999999999999999999


Q ss_pred             CCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEE
Q psy17610        273 TDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYF  352 (515)
Q Consensus       273 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l  352 (515)
                      .|++||+||.+++..++.+..+.++.++.++++|+++.++ ..+.|.+||..+...++.++.+  ..|.+..++|+...+
T Consensus       163 dd~tVRLWD~rTgt~v~sL~~~s~VtSlEvs~dG~ilTia-~gssV~Fwdaksf~~lKs~k~P--~nV~SASL~P~k~~f  239 (334)
T KOG0278|consen  163 DDKTVRLWDHRTGTEVQSLEFNSPVTSLEVSQDGRILTIA-YGSSVKFWDAKSFGLLKSYKMP--CNVESASLHPKKEFF  239 (334)
T ss_pred             cCCceEEEEeccCcEEEEEecCCCCcceeeccCCCEEEEe-cCceeEEeccccccceeeccCc--cccccccccCCCceE
Confidence            9999999999999999999999999999999999887655 5678999999999999999877  688999999999999


Q ss_pred             EEEcCCCeEEEEEccCCeeeeec-cCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCc
Q psy17610        353 LTGGADQIVKMWMYREGVPCFVG-IGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELE  412 (515)
Q Consensus       353 ~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  412 (515)
                      ++|++|..++.||..+++.+..+ .+|.++|.++.|+|+|...++|+.||+|++|.+...+
T Consensus       240 VaGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~~  300 (334)
T KOG0278|consen  240 VAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTTPGK  300 (334)
T ss_pred             EecCcceEEEEEeccCCceeeecccCCCCceEEEEECCCCceeeccCCCceEEEEEecCCC
Confidence            99999999999999999998886 8999999999999999999999999999999887654

>KOG0285|consensus

Probab=100.00  E-value=8.8e-39  Score=262.20  Aligned_cols=286  Identities=18%  Similarity=0.281  Sum_probs=255.8

Q ss_pred             EEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCC
Q psy17610         76 YLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRT  155 (515)
Q Consensus        76 ~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~  155 (515)
                      .+.+|.+.|.|+++.|.++++++|+.|++|.|||+.+| ++...+.||...|..+++|+-.+++++++.|+.|+.||++.
T Consensus       146 Vi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg-~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~  224 (460)
T KOG0285|consen  146 VISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATG-QLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEY  224 (460)
T ss_pred             hhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccC-eEEEeecchhheeeeeeecccCceEEEecCCCeeEEEechh
Confidence            35689999999999999999999999999999999995 77888999999999999999999999999999999999999


Q ss_pred             CceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEE
Q psy17610        156 LNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRI  235 (515)
Q Consensus       156 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i  235 (515)
                      .+.++.+.+|-..|.|++.+|.-+.|++|+.|..+++||+++...+..+ .+|..+|..+.+.|-...+++|+.|++|++
T Consensus       225 nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l-~GH~~~V~~V~~~~~dpqvit~S~D~tvrl  303 (460)
T KOG0285|consen  225 NKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVL-SGHTNPVASVMCQPTDPQVITGSHDSTVRL  303 (460)
T ss_pred             hhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccceEEEe-cCCCCcceeEEeecCCCceEEecCCceEEE
Confidence            9999999999999999999999999999999999999999999999988 799999999999997778999999999999


Q ss_pred             EEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCc-cEEEEEEcCCCcEEEEEEC
Q psy17610        236 WKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPS-MIMSAAYHPSEVQLITCST  314 (515)
Q Consensus       236 w~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~  314 (515)
                      ||+.  .++....+..|...+.+++.+|....+++++.| .++-|++..+..+..+..+. .+.+++.+.|+ ++++|+.
T Consensus       304 WDl~--agkt~~tlt~hkksvral~lhP~e~~fASas~d-nik~w~~p~g~f~~nlsgh~~iintl~~nsD~-v~~~G~d  379 (460)
T KOG0285|consen  304 WDLR--AGKTMITLTHHKKSVRALCLHPKENLFASASPD-NIKQWKLPEGEFLQNLSGHNAIINTLSVNSDG-VLVSGGD  379 (460)
T ss_pred             eeec--cCceeEeeecccceeeEEecCCchhhhhccCCc-cceeccCCccchhhccccccceeeeeeeccCc-eEEEcCC
Confidence            9995  455666788899999999999999999999987 69999999998877765554 56777776654 6788999


Q ss_pred             CCeEEEEeCCCCceEEEEec-------CCCccEEEEEEcCCCCEEEEEcCCCeEEEEEcc
Q psy17610        315 NKMIDYWETCDGSIIRSLEG-------SDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYR  367 (515)
Q Consensus       315 ~~~i~~~d~~~~~~~~~~~~-------~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~  367 (515)
                      +|.+.+||.+++...+....       .....|.+.+|...|..|++|..|.+|++|.-.
T Consensus       380 ng~~~fwdwksg~nyQ~~~t~vqpGSl~sEagI~as~fDktg~rlit~eadKtIk~~keD  439 (460)
T KOG0285|consen  380 NGSIMFWDWKSGHNYQRGQTIVQPGSLESEAGIFASCFDKTGSRLITGEADKTIKMYKED  439 (460)
T ss_pred             ceEEEEEecCcCcccccccccccCCccccccceeEEeecccCceEEeccCCcceEEEecc
Confidence            99999999999866554421       123678899999999999999999999999754

>KOG2106|consensus

Probab=100.00  E-value=1.4e-36  Score=260.27  Aligned_cols=410  Identities=18%  Similarity=0.251  Sum_probs=317.0

Q ss_pred             EEEEecCCCcEEEEEEecCCCEEEEEecCc--------eEEEEECCCCceeEEeeccCccCeEEEEeCC--CCcEEEEEe
Q psy17610         74 ALYLLKDDSGISSLQYNPVNNKVFVGTVNC--------EIFLIDMNSGFTLTLVNTCHTSAIYDLQFPV--NFSSVFATC  143 (515)
Q Consensus        74 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~--------~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~~~~  143 (515)
                      +....+|...|.|++.+|+.-.+++|-..|        .+++||..+- ....++......|++++|++  .|..+++..
T Consensus        97 Qr~y~GH~ddikc~~vHPdri~vatGQ~ag~~g~~~~phvriWdsv~L-~TL~V~g~f~~GV~~vaFsk~~~G~~l~~vD  175 (626)
T KOG2106|consen   97 QRHYLGHNDDIKCMAVHPDRIRVATGQGAGTSGRPLQPHVRIWDSVTL-STLHVIGFFDRGVTCVAFSKINGGSLLCAVD  175 (626)
T ss_pred             cccccCCCCceEEEeecCCceeeccCcccccCCCcCCCeeeecccccc-eeeeeeccccccceeeeecccCCCceEEEec
Confidence            455678999999999999999999875544        5999998773 33444555677899999987  345555554


Q ss_pred             c--CCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEE---ecCCCCCCeEEEEEc
Q psy17610        144 S--KNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFI---IPNAHNRGVTALAIT  218 (515)
Q Consensus       144 ~--d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~---~~~~~~~~v~~~~~~  218 (515)
                      .  +..+.+||...+.........+..|....|+|.+..+++....+.+.+|+++.+.....   +.......|.|++|.
T Consensus       176 ~s~~h~lSVWdWqk~~~~~~vk~sne~v~~a~FHPtd~nliit~Gk~H~~Fw~~~~~~l~k~~~~fek~ekk~Vl~v~F~  255 (626)
T KOG2106|consen  176 DSNPHMLSVWDWQKKAKLGPVKTSNEVVFLATFHPTDPNLIITCGKGHLYFWTLRGGSLVKRQGIFEKREKKFVLCVTFL  255 (626)
T ss_pred             CCCccccchhhchhhhccCcceeccceEEEEEeccCCCcEEEEeCCceEEEEEccCCceEEEeeccccccceEEEEEEEc
Confidence            4  55689999999888888888888999999999888787777889999999998866443   333344679999999


Q ss_pred             CCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceE-----------
Q psy17610        219 QDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTR-----------  287 (515)
Q Consensus       219 ~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~-----------  287 (515)
                      ++|+ +++|..+|.|.||+..  ..........|.+.|.+++...+|.+ ++|+.|+.|..||- .-+.           
T Consensus       256 engd-viTgDS~G~i~Iw~~~--~~~~~k~~~aH~ggv~~L~~lr~Gtl-lSGgKDRki~~Wd~-~y~k~r~~elPe~~G  330 (626)
T KOG2106|consen  256 ENGD-VITGDSGGNILIWSKG--TNRISKQVHAHDGGVFSLCMLRDGTL-LSGGKDRKIILWDD-NYRKLRETELPEQFG  330 (626)
T ss_pred             CCCC-EEeecCCceEEEEeCC--CceEEeEeeecCCceEEEEEecCccE-eecCccceEEeccc-cccccccccCchhcC
Confidence            9986 7889999999999984  34444444499999999999999875 55999999999983 1111           


Q ss_pred             -------------------------------EEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCC
Q psy17610        288 -------------------------------LIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSD  336 (515)
Q Consensus       288 -------------------------------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~  336 (515)
                                                     +....+......++.+|+...+++++.|+.+++|+  ..++..+.... 
T Consensus       331 ~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~~k~~wt~~~~-  407 (626)
T KOG2106|consen  331 PIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--DHKLEWTKIIE-  407 (626)
T ss_pred             CeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChhheeeccCcceEEEcc--CCceeEEEEec-
Confidence                                           11112223567888999999999999999999999  55555554443 


Q ss_pred             CccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccC
Q psy17610        337 VAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVG  416 (515)
Q Consensus       337 ~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~  416 (515)
                       .+..|+.|+|.| .+|.|...|...+.|.++...+..-.. ..+++.++|+|+|.+||.|+.|+.|++|.+........
T Consensus       408 -d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~~lv~~~~d-~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~  484 (626)
T KOG2106|consen  408 -DPAECADFHPSG-VVAVGTATGRWFVLDTETQDLVTIHTD-NEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYS  484 (626)
T ss_pred             -CceeEeeccCcc-eEEEeeccceEEEEecccceeEEEEec-CCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEE
Confidence             678899999999 999999999999999998665555444 89999999999999999999999999999876542111


Q ss_pred             CCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeee-----------------e
Q psy17610        417 DSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRS-----------------L  479 (515)
Q Consensus       417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~-----------------~  479 (515)
                      .                  .-.-+..+|+.+.||+|+++|.+-+.|-.|..|....-+.+..                 +
T Consensus       485 r------------------~~k~~gs~ithLDwS~Ds~~~~~~S~d~eiLyW~~~~~~~~ts~kDvkW~t~~c~lGF~v~  546 (626)
T KOG2106|consen  485 R------------------VGKCSGSPITHLDWSSDSQFLVSNSGDYEILYWKPSECKQITSVKDVKWATYTCTLGFEVF  546 (626)
T ss_pred             E------------------eeeecCceeEEeeecCCCceEEeccCceEEEEEccccCcccceecceeeeeeEEEEEEEEe
Confidence            1                  1111226799999999999999999999999995432221111                 1


Q ss_pred             cccccceEEEEEEcCCCcEEEEeecCCeEEEEEE
Q psy17610        480 EGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLY  513 (515)
Q Consensus       480 ~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~  513 (515)
                      -+.+...|..++-+.+.+++|+|.+.|.|++|.|
T Consensus       547 g~s~~t~i~a~~rs~~~~~lA~gdd~g~v~lf~y  580 (626)
T KOG2106|consen  547 GGSDGTDINAVARSHCEKLLASGDDFGKVHLFSY  580 (626)
T ss_pred             cccCCchHHHhhhhhhhhhhhccccCceEEEEcc
Confidence            1223355677778888999999999999999976

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=100.00  E-value=2.7e-37  Score=277.29  Aligned_cols=285  Identities=26%  Similarity=0.419  Sum_probs=258.0

Q ss_pred             eeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCC
Q psy17610        119 VNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSG  198 (515)
Q Consensus       119 ~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~  198 (515)
                      .+.+|.++|.+++|+|+++.+++++.++.+++|++.+++....+..|...+..+.|+|+++.+++++.+|.+++|++.++
T Consensus         4 ~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~   83 (289)
T cd00200           4 TLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETG   83 (289)
T ss_pred             HhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcc
Confidence            34579999999999999999999999999999999998888888889999999999999999999999999999999988


Q ss_pred             ceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEE
Q psy17610        199 KLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCV  278 (515)
Q Consensus       199 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~  278 (515)
                      +....+ ..|...+.++.|+++++++++++.++.+.+||+.  .......+..|...+.++.|+|++.++++++.++.++
T Consensus        84 ~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~  160 (289)
T cd00200          84 ECVRTL-TGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVE--TGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIK  160 (289)
T ss_pred             cceEEE-eccCCcEEEEEEcCCCCEEEEecCCCeEEEEECC--CcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEE
Confidence            777777 5788899999999998888888889999999995  3455666778899999999999988888888899999


Q ss_pred             EEEcccceEEEEEEcCc-cEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcC
Q psy17610        279 LWDLIKSTRLIIMILPS-MIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA  357 (515)
Q Consensus       279 iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~  357 (515)
                      +||+++++....+..+. .+.++.++|+++.+++++.++.+++||++.++.+..+..+. ..+.++.|+|++.++++++.
T Consensus       161 i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~  239 (289)
T cd00200         161 LWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHE-NGVNSVAFSPDGYLLASGSE  239 (289)
T ss_pred             EEEccccccceeEecCccccceEEECCCcCEEEEecCCCcEEEEECCCCceecchhhcC-CceEEEEEcCCCcEEEEEcC
Confidence            99999888777776554 89999999999999999999999999999988888886654 68999999999999998888


Q ss_pred             CCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEe
Q psy17610        358 DQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWT  407 (515)
Q Consensus       358 dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~  407 (515)
                      +|.+++|++.+++....+..|...|.+++|+|++++|++++.|+.+++|+
T Consensus       240 ~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~  289 (289)
T cd00200         240 DGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD  289 (289)
T ss_pred             CCcEEEEEcCCceeEEEccccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence            99999999999999898889999999999999999999999999999996

>KOG1063|consensus

Probab=100.00  E-value=2.6e-37  Score=274.78  Aligned_cols=424  Identities=17%  Similarity=0.207  Sum_probs=321.3

Q ss_pred             eEEEEEecCCCcEEEEEEecCCC---EEEEEecCceEEEEECCCCc------------------------eeE------E
Q psy17610         72 VTALYLLKDDSGISSLQYNPVNN---KVFVGTVNCEIFLIDMNSGF------------------------TLT------L  118 (515)
Q Consensus        72 ~~~~~~~~~~~~v~~~~~s~~~~---~l~~~~~d~~i~iw~~~~~~------------------------~~~------~  118 (515)
                      .....+.||.+.|.+++|...+.   +||+++.|..|+||.+.-+.                        .+.      .
T Consensus       182 ~~v~el~GH~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~ea  261 (764)
T KOG1063|consen  182 ARVAELEGHTDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISFEA  261 (764)
T ss_pred             eEEEEeeccchhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEehhh
Confidence            34566789999999999998554   78999999999999874321                        111      2


Q ss_pred             eeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeE----E---EEecCeEEEEEEEeeCCCEEEEEeCCCeEE
Q psy17610        119 VNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELL----R---ISVMNMICACIVFTYDGKAILSGWNDGFIR  191 (515)
Q Consensus       119 ~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~----~---~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~  191 (515)
                      .+.||.+.|.++.|+|.+..|++++.|+++.+|...+..-+.    +   ..+.........|+|+++.+++-+..|-.+
T Consensus       262 ll~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~Gg~h  341 (764)
T KOG1063|consen  262 LLMGHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRTGGFH  341 (764)
T ss_pred             hhcCcccceEEEEEccchhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEecccCcEE
Confidence            345899999999999999999999999999999877653222    1   223344578889999999999999999999


Q ss_pred             EEecCCC-c-eEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCc--eeeEEeeccccCceEEEEEecCCCE
Q psy17610        192 CFTPQSG-K-LKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRES--QSLQCVLKEHTSSVSVIQIKSDSKE  267 (515)
Q Consensus       192 ~~~~~~~-~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~  267 (515)
                      +|..+.. . .......+|...|+.++|+|.|.+|++.+.|.+-|+|-.-..+  ...+...+-|...++|+++-+....
T Consensus       342 lWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~~~~  421 (764)
T KOG1063|consen  342 LWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNEDLQ  421 (764)
T ss_pred             EEeccCccceeeccccccccccceeeeecCCCCEEEEeccccceeeecccccccceeeecccccccccceeeehccCCce
Confidence            9983322 1 1222337899999999999999999999999999999764222  2233344568888999999886678


Q ss_pred             EEEEeCCCcEEEEEccc-------------------------------------------ceE----EE-----------
Q psy17610        268 AMSASTDGTCVLWDLIK-------------------------------------------STR----LI-----------  289 (515)
Q Consensus       268 l~~~~~d~~i~iwd~~~-------------------------------------------~~~----~~-----------  289 (515)
                      +++|.++..+|+|+...                                           +..    ..           
T Consensus       422 FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L~  501 (764)
T KOG1063|consen  422 FVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCELT  501 (764)
T ss_pred             eeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchhcc
Confidence            89999999999997510                                           000    00           


Q ss_pred             -------------------EEEcCccEEEEEEcCCCcEEEEEECC-----CeEEEEeCCCCceEEEEecCCCccEEEEEE
Q psy17610        290 -------------------IMILPSMIMSAAYHPSEVQLITCSTN-----KMIDYWETCDGSIIRSLEGSDVAAVNCVDF  345 (515)
Q Consensus       290 -------------------~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~  345 (515)
                                         .+.+...+.+++.+|+++.+++++..     ..|++|+..+......+..|. -.|+.++|
T Consensus       502 ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~Hs-LTVT~l~F  580 (764)
T KOG1063|consen  502 EPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHS-LTVTRLAF  580 (764)
T ss_pred             CCChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccc-eEEEEEEE
Confidence                               01122359999999999999998764     359999999999988888887 89999999


Q ss_pred             cCCCCEEEEEcCCCeEEEEEccCCe----eeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCccc
Q psy17610        346 VDDGKYFLTGGADQIVKMWMYREGV----PCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSL  421 (515)
Q Consensus       346 ~~~~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~  421 (515)
                      ||||++|++.+.|.++.+|......    .....+.|+.-|.+..|+|++.+++|+|.|.+|++|...........    
T Consensus       581 Spdg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~~d~~i~----  656 (764)
T KOG1063|consen  581 SPDGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDLRDKYIS----  656 (764)
T ss_pred             CCCCcEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccCchhhhhh----
Confidence            9999999999999999999875432    23346789999999999999999999999999999998765311110    


Q ss_pred             ceeeecccccccceeeecCcccEEEeeeccC-----CcEEEEeecCCeEEEEecCC-------Ce--eeee---eccccc
Q psy17610        422 SSKISRSTARSTRLIIMILPSMIMSAAYHPS-----EVQLITCSTNKMIDYWETCD-------GS--IIRS---LEGSDV  484 (515)
Q Consensus       422 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~-----~~~l~~~~~dg~v~iwd~~~-------~~--~~~~---~~~~~~  484 (515)
                                  +.....+...++.+++.|-     +..+++|-+.|.|.+|....       +.  ....   ..+|. 
T Consensus       657 ------------~~a~~~~~~aVTAv~~~~~~~~e~~~~vavGle~GeI~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~-  723 (764)
T KOG1063|consen  657 ------------RFACLKFSLAVTAVAYLPVDHNEKGDVVAVGLEKGEIVLWRRKREHRQVTVGTFNLDTRLCATIGPD-  723 (764)
T ss_pred             ------------hhchhccCCceeeEEeeccccccccceEEEEecccEEEEEecccccccccceeeeeccccccccChH-
Confidence                        1112234456888888763     33788999999999999651       11  1111   11233 


Q ss_pred             ceEEEEEEcCC----------CcEEEEeecCCeEEEEEE
Q psy17610        485 AAVNCVDFVDD----------GKYFLTGGADQIVKICLY  513 (515)
Q Consensus       485 ~~v~~~~~s~~----------~~~l~s~~~dg~v~iw~~  513 (515)
                      ..|+.+.|.|-          ...|++|++|..+|++++
T Consensus       724 ~aV~rl~w~p~~~~~~~~~~~~l~la~~g~D~~vri~nv  762 (764)
T KOG1063|consen  724 SAVNRLLWRPTCSDDWVEDKEWLNLAVGGDDESVRIFNV  762 (764)
T ss_pred             HhhheeEeccccccccccccceeEEeeecccceeEEeec
Confidence            78999999974          235799999999999986

>KOG0266|consensus

Probab=100.00  E-value=5.8e-38  Score=292.49  Aligned_cols=284  Identities=26%  Similarity=0.425  Sum_probs=257.9

Q ss_pred             CccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCc--eeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEec-CCCc
Q psy17610        123 HTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLN--ELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTP-QSGK  199 (515)
Q Consensus       123 h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~-~~~~  199 (515)
                      |...|.++.|+|+|+.+++++.++.+++|+..+.+  ..+.+.+|...|..++|+|+++++++++.|++|++||+ ..+.
T Consensus       158 ~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~  237 (456)
T KOG0266|consen  158 ECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGR  237 (456)
T ss_pred             ccCceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCceEEEeeccCCCe
Confidence            47889999999999999999999999999998877  77778899999999999999999999999999999999 5557


Q ss_pred             eEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEE
Q psy17610        200 LKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVL  279 (515)
Q Consensus       200 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i  279 (515)
                      .+..+ .+|...|++++|+|+++++++|+.|++|++||++  ...+...+.+|...|++++|++++.++++++.|+.|++
T Consensus       238 ~~~~l-~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~--~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~v  314 (456)
T KOG0266|consen  238 NLKTL-KGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVR--TGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRV  314 (456)
T ss_pred             EEEEe-cCCCCceEEEEecCCCCEEEEecCCCcEEEEecc--CCeEEEeeeccCCceEEEEECCCCCEEEEcCCCccEEE
Confidence            77777 6999999999999999999999999999999995  47888899999999999999999999999999999999


Q ss_pred             EEcccce--EEEEEEcCc---cEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCc--cEEEEEEcCCCCEE
Q psy17610        280 WDLIKST--RLIIMILPS---MIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVA--AVNCVDFVDDGKYF  352 (515)
Q Consensus       280 wd~~~~~--~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~--~i~~~~~~~~~~~l  352 (515)
                      ||+.++.  +...+....   ++..+.|+|++.++++++.|+.+++||+..+.....+..+...  .+.+...++.+.++
T Consensus       315 wd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  394 (456)
T KOG0266|consen  315 WDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGGKLI  394 (456)
T ss_pred             EECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeeecccCCcceeEecccccCCCCeE
Confidence            9999998  344443332   5799999999999999999999999999999999999988754  44455667899999


Q ss_pred             EEEcCCCeEEEEEccCCeeeeeccCC-CCCeeEEEECCCCcEEEEEe--CCCcEEEEeCC
Q psy17610        353 LTGGADQIVKMWMYREGVPCFVGIGH-AASITKIKISPDKKVIVSVS--ADGGIFLWTFP  409 (515)
Q Consensus       353 ~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~--~dg~i~iw~~~  409 (515)
                      ++|+.|+.|++|++.++..+..+.+| ...+..+.++|..+++++++  .|+.+++|...
T Consensus       395 ~sg~~d~~v~~~~~~s~~~~~~l~~h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~~~  454 (456)
T KOG0266|consen  395 YSGSEDGSVYVWDSSSGGILQRLEGHSKAAVSDLSSHPTENLIASSSFEGDGLIRLWKYD  454 (456)
T ss_pred             EEEeCCceEEEEeCCccchhhhhcCCCCCceeccccCCCcCeeeecCcCCCceEEEecCC
Confidence            99999999999999999999999999 89999999999999999998  68899999754

>KOG0316|consensus

Probab=100.00  E-value=4.8e-38  Score=243.19  Aligned_cols=286  Identities=16%  Similarity=0.232  Sum_probs=257.4

Q ss_pred             EEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecC
Q psy17610        117 TLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQ  196 (515)
Q Consensus       117 ~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~  196 (515)
                      ..++.+|+++|..+.|+-||++.++++.|++|++||...+.+++++.+|...|..++.+.|...+++++.|..+.+||++
T Consensus        10 ~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~   89 (307)
T KOG0316|consen   10 LSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVN   89 (307)
T ss_pred             ceeecccccceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEEcc
Confidence            44667899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCc
Q psy17610        197 SGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGT  276 (515)
Q Consensus       197 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~  276 (515)
                      +|+....+ .+|.+.|+.+.|+.+...+++|+.|..+++||.+....++++.+......|.++...  +..+++|+.||+
T Consensus        90 TGkv~Rr~-rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~--~heIvaGS~DGt  166 (307)
T KOG0316|consen   90 TGKVDRRF-RGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVA--EHEIVAGSVDGT  166 (307)
T ss_pred             cCeeeeec-ccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEec--ccEEEeeccCCc
Confidence            99999999 799999999999999999999999999999999999999999999999999998874  567999999999


Q ss_pred             EEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCcc-EEEEEEcCCCCEEEEE
Q psy17610        277 CVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAA-VNCVDFVDDGKYFLTG  355 (515)
Q Consensus       277 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~l~~~  355 (515)
                      ++.||++.++.... ....+|+++.|+++++..++++.++++++.|-.+|+.+..+.+|.... -...+++.....+++|
T Consensus       167 vRtydiR~G~l~sD-y~g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~eykldc~l~qsdthV~sg  245 (307)
T KOG0316|consen  167 VRTYDIRKGTLSSD-YFGHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEYKLDCCLNQSDTHVFSG  245 (307)
T ss_pred             EEEEEeecceeehh-hcCCcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcccccceeeeeeeecccceeEEec
Confidence            99999998875433 345689999999999999999999999999999999999998876332 2345677777899999


Q ss_pred             cCCCeEEEEEccCCeeeeeccCCCCC-eeEEEECCCCcEEEEEeCCCcEEEEe
Q psy17610        356 GADQIVKMWMYREGVPCFVGIGHAAS-ITKIKISPDKKVIVSVSADGGIFLWT  407 (515)
Q Consensus       356 ~~dg~i~i~d~~~~~~~~~~~~~~~~-i~~~~~~~~~~~l~~~~~dg~i~iw~  407 (515)
                      ++||.+++||+.....+..+..+... +++++++|....|+++.. +.+..|.
T Consensus       246 SEDG~Vy~wdLvd~~~~sk~~~~~~v~v~dl~~hp~~~~f~~A~~-~~~~~~~  297 (307)
T KOG0316|consen  246 SEDGKVYFWDLVDETQISKLSVVSTVIVTDLSCHPTMDDFITATG-HGDLFWY  297 (307)
T ss_pred             cCCceEEEEEeccceeeeeeccCCceeEEeeecccCccceeEecC-Cceecee
Confidence            99999999999999999999888887 899999998887887754 4556664

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=100.00  E-value=4.7e-37  Score=275.70  Aligned_cols=284  Identities=24%  Similarity=0.419  Sum_probs=255.2

Q ss_pred             EecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCC
Q psy17610         77 LLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTL  156 (515)
Q Consensus        77 ~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~  156 (515)
                      +.+|.++|++++|+|++++|++++.+|.|.+|++.++. .......|...+..+.|+|+++.+++++.++.+++|++.++
T Consensus         5 ~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~   83 (289)
T cd00200           5 LKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGE-LLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETG   83 (289)
T ss_pred             hcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCC-cEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcc
Confidence            34799999999999999999999999999999999854 44556679999999999999999999999999999999998


Q ss_pred             ceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEE
Q psy17610        157 NELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIW  236 (515)
Q Consensus       157 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw  236 (515)
                      +.+..+..+...+.++.|+|+++++++++.++.+.+||+.+++....+ ..|...+.++.|+|++.++++++.++.+++|
T Consensus        84 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~  162 (289)
T cd00200          84 ECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTL-RGHTDWVNSVAFSPDGTFVASSSQDGTIKLW  162 (289)
T ss_pred             cceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEe-ccCCCcEEEEEEcCcCCEEEEEcCCCcEEEE
Confidence            888889889889999999999888888888999999999988888777 4788999999999999999988889999999


Q ss_pred             EccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEE-EcCccEEEEEEcCCCcEEEEEECC
Q psy17610        237 KLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIM-ILPSMIMSAAYHPSEVQLITCSTN  315 (515)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~  315 (515)
                      |++  .......+..|...+.++.|+|+++.+++++.++.+++||++.++....+ .+...+.++.++|++.++++++.+
T Consensus       163 d~~--~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  240 (289)
T cd00200         163 DLR--TGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSED  240 (289)
T ss_pred             Ecc--ccccceeEecCccccceEEECCCcCEEEEecCCCcEEEEECCCCceecchhhcCCceEEEEEcCCCcEEEEEcCC
Confidence            995  34455566788889999999999999999999999999999988888877 556689999999998888888889


Q ss_pred             CeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEE
Q psy17610        316 KMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWM  365 (515)
Q Consensus       316 ~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d  365 (515)
                      +.+++||+.+++....+..+. ..+.+++|+|+++++++++.||.+++|+
T Consensus       241 ~~i~i~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~d~~i~iw~  289 (289)
T cd00200         241 GTIRVWDLRTGECVQTLSGHT-NSVTSLAWSPDGKRLASGSADGTIRIWD  289 (289)
T ss_pred             CcEEEEEcCCceeEEEccccC-CcEEEEEECCCCCEEEEecCCCeEEecC
Confidence            999999999999888888654 7899999999999999999999999996

>KOG0293|consensus

Probab=100.00  E-value=1.9e-38  Score=265.02  Aligned_cols=287  Identities=22%  Similarity=0.320  Sum_probs=241.8

Q ss_pred             CCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCC-ceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEccc
Q psy17610        206 NAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRE-SQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIK  284 (515)
Q Consensus       206 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~  284 (515)
                      ..|...|.-+.|+++|++||+++.|.+..+|++... ..+...++.+|..+|..+.|+||.+++++++.|..+.+||..+
T Consensus       221 ~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~t  300 (519)
T KOG0293|consen  221 QDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDT  300 (519)
T ss_pred             hhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccCCc
Confidence            689999999999999999999999999999998533 3466778999999999999999999999999999999999999


Q ss_pred             ceEEEEEEcC--ccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEE
Q psy17610        285 STRLIIMILP--SMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVK  362 (515)
Q Consensus       285 ~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~  362 (515)
                      +.....+...  ..+.+++|.||+..+++|+.|+.+..||+. |..+...++.....+.+++.++||+++++.+.|..|+
T Consensus       301 gd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlD-gn~~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~~i~  379 (519)
T KOG0293|consen  301 GDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLD-GNILGNWEGVRDPKVHDLAITYDGKYVLLVTVDKKIR  379 (519)
T ss_pred             chhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCC-cchhhcccccccceeEEEEEcCCCcEEEEEeccccee
Confidence            9988888766  578999999999999999999999999984 4456666665556799999999999999999999999


Q ss_pred             EEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcc
Q psy17610        363 MWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPS  442 (515)
Q Consensus       363 i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  442 (515)
                      +++.++....... ....+|++++.|.|++++++.-.+..+++||++...........                  ....
T Consensus       380 l~~~e~~~dr~li-se~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Gh------------------kq~~  440 (519)
T KOG0293|consen  380 LYNREARVDRGLI-SEEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGH------------------KQGH  440 (519)
T ss_pred             eechhhhhhhccc-cccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcc------------------cccc
Confidence            9999876554433 44578999999999999999999999999999843211100000                  0112


Q ss_pred             cEEEeeecc-CCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCC-cEEEEeecCCeEEEEEE
Q psy17610        443 MIMSAAYHP-SEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDG-KYFLTGGADQIVKICLY  513 (515)
Q Consensus       443 ~i~~~~~s~-~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~dg~v~iw~~  513 (515)
                      .+..-+|.- +..++|+|++|+.|+||+..+|+++.++.||. ..|++++|+|.. .++|+||+||+||||-.
T Consensus       441 fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~LsGHs-~~vNcVswNP~~p~m~ASasDDgtIRIWg~  512 (519)
T KOG0293|consen  441 FIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVLSGHS-KTVNCVSWNPADPEMFASASDDGTIRIWGP  512 (519)
T ss_pred             eEEEeccCCCCcceEEecCCCceEEEEEccCCceeEeecCCc-ceeeEEecCCCCHHHhhccCCCCeEEEecC
Confidence            244445544 45899999999999999999999999999998 999999999965 57999999999999953

>KOG0282|consensus

Probab=100.00  E-value=1.5e-39  Score=277.19  Aligned_cols=289  Identities=18%  Similarity=0.281  Sum_probs=254.9

Q ss_pred             eeEEeeccCccCeEEEEeCC-CCcEEEEEecCCcEEEEeCCC-CceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEE
Q psy17610        115 TLTLVNTCHTSAIYDLQFPV-NFSSVFATCSKNDIRIWSVRT-LNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRC  192 (515)
Q Consensus       115 ~~~~~~~~h~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~  192 (515)
                      .....+.+|...|+++.|.| .+.+|++++.|+.|+||++-. +++++++.+|..+|..++|+++|..+++++.|+.+++
T Consensus       205 k~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKl  284 (503)
T KOG0282|consen  205 KLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKL  284 (503)
T ss_pred             hheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeee
Confidence            45567889999999999999 777888888899999999986 8899999999999999999999999999999999999


Q ss_pred             EecCCCceEEEecCCCCCCeEEEEEcCCC-CEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEE
Q psy17610        193 FTPQSGKLKFIIPNAHNRGVTALAITQDG-TRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSA  271 (515)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  271 (515)
                      ||.++|++...+.  ....++|+.|+|++ +.+++|+.|+.|+.||++  ..+.++.+..|-+.|..+.|-+++++++++
T Consensus       285 wDtETG~~~~~f~--~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiR--s~kvvqeYd~hLg~i~~i~F~~~g~rFiss  360 (503)
T KOG0282|consen  285 WDTETGQVLSRFH--LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIR--SGKVVQEYDRHLGAILDITFVDEGRRFISS  360 (503)
T ss_pred             eccccceEEEEEe--cCCCceeeecCCCCCcEEEEecCCCcEEEEecc--chHHHHHHHhhhhheeeeEEccCCceEeee
Confidence            9999999998873  45678999999988 889999999999999995  455777888999999999999999999999


Q ss_pred             eCCCcEEEEEcccceEEEEEEcCc--cEEEEEEcCCCcEEEEEECCCeEEEEeCCCCce---EEEEecCCC-ccEEEEEE
Q psy17610        272 STDGTCVLWDLIKSTRLIIMILPS--MIMSAAYHPSEVQLITCSTNKMIDYWETCDGSI---IRSLEGSDV-AAVNCVDF  345 (515)
Q Consensus       272 ~~d~~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~---~~~~~~~~~-~~i~~~~~  345 (515)
                      +.|+++++|+.+.+..+.....+.  ...++..+|+++++++-+.+..|.++.+...-.   .+.+++|.. +....+.|
T Consensus       361 SDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~f  440 (503)
T KOG0282|consen  361 SDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDF  440 (503)
T ss_pred             ccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEE
Confidence            999999999999888777665554  577899999999999999999999998654322   223343321 34567899


Q ss_pred             cCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECC-CCcEEEEEeCCCcEEEEe
Q psy17610        346 VDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISP-DKKVIVSVSADGGIFLWT  407 (515)
Q Consensus       346 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iw~  407 (515)
                      ||||.+|++|..||.+.+||.++-+.+..++.|..++..+.|+| ....+|+++.||.|++|+
T Consensus       441 SpDG~~l~SGdsdG~v~~wdwkt~kl~~~lkah~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd  503 (503)
T KOG0282|consen  441 SPDGRTLCSGDSDGKVNFWDWKTTKLVSKLKAHDQPCIGVDWHPVEPSKVATCGWDGLIKIWD  503 (503)
T ss_pred             cCCCCeEEeecCCccEEEeechhhhhhhccccCCcceEEEEecCCCcceeEecccCceeEecC
Confidence            99999999999999999999999999999999999999999999 456899999999999996

>KOG0266|consensus

Probab=100.00  E-value=1.9e-37  Score=289.07  Aligned_cols=287  Identities=22%  Similarity=0.388  Sum_probs=254.2

Q ss_pred             CCCcEEEEEEecCCCEEEEEecCceEEEEECCCCc-eeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeC-CCCc
Q psy17610         80 DDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGF-TLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSV-RTLN  157 (515)
Q Consensus        80 ~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~-~~~~  157 (515)
                      |...|+++.|+|+|+++++++.++.+++|+..++. .+...+.+|...|.+++|+|+++++++++.|++++|||+ ..+.
T Consensus       158 ~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~  237 (456)
T KOG0266|consen  158 ECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGR  237 (456)
T ss_pred             ccCceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCceEEEeeccCCCe
Confidence            47899999999999999999999999999997754 244555789999999999999999999999999999999 5668


Q ss_pred             eeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEE
Q psy17610        158 ELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWK  237 (515)
Q Consensus       158 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~  237 (515)
                      .++++.+|...|++++|+|+++.+++|+.|++|++||++++++...+ .+|...|++++|++++++|++++.|+.|++||
T Consensus       238 ~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l-~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd  316 (456)
T KOG0266|consen  238 NLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKL-KGHSDGISGLAFSPDGNLLVSASYDGTIRVWD  316 (456)
T ss_pred             EEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEee-eccCCceEEEEECCCCCEEEEcCCCccEEEEE
Confidence            99999999999999999999999999999999999999999999998 79999999999999999999999999999999


Q ss_pred             ccCCceeeEEeeccccC--ceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCc----cEEEEEEcCCCcEEEE
Q psy17610        238 LTRESQSLQCVLKEHTS--SVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPS----MIMSAAYHPSEVQLIT  311 (515)
Q Consensus       238 ~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~  311 (515)
                      +......+...+.++..  +++.+.|+|++.++++++.|+.+++||+..+........+.    .+.+...++.+.++++
T Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s  396 (456)
T KOG0266|consen  317 LETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGGKLIYS  396 (456)
T ss_pred             CCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeeecccCCcceeEecccccCCCCeEEE
Confidence            96544223445555544  49999999999999999999999999999888777765443    3445566789999999


Q ss_pred             EECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEc--CCCeEEEEEcc
Q psy17610        312 CSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGG--ADQIVKMWMYR  367 (515)
Q Consensus       312 ~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~dg~i~i~d~~  367 (515)
                      ++.|+.|++||+.++..+..+.++....+..+.++|..+++++++  .|+.+++|..+
T Consensus       397 g~~d~~v~~~~~~s~~~~~~l~~h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~~~  454 (456)
T KOG0266|consen  397 GSEDGSVYVWDSSSGGILQRLEGHSKAAVSDLSSHPTENLIASSSFEGDGLIRLWKYD  454 (456)
T ss_pred             EeCCceEEEEeCCccchhhhhcCCCCCceeccccCCCcCeeeecCcCCCceEEEecCC
Confidence            999999999999999999999988448889999999999999998  68899999753

>KOG0292|consensus

Probab=100.00  E-value=3.5e-37  Score=281.20  Aligned_cols=368  Identities=15%  Similarity=0.203  Sum_probs=275.4

Q ss_pred             CCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCcee
Q psy17610         80 DDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNEL  159 (515)
Q Consensus        80 ~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~  159 (515)
                      .+..|..++|+|...+++++-..|.|++||+.-+..+. .+..|.++|..++|+|.++.+++++.|..|++|+.++.+++
T Consensus         8 kSsRvKglsFHP~rPwILtslHsG~IQlWDYRM~tli~-rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrcl   86 (1202)
T KOG0292|consen    8 KSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGTLID-RFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCL   86 (1202)
T ss_pred             ccccccceecCCCCCEEEEeecCceeeeehhhhhhHHh-hhhccCCccceeeecCCCCeEEecCCccEEEEEecccceeh
Confidence            46788999999999999999999999999999864444 45669999999999999999999999999999999999999


Q ss_pred             EEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEcc
Q psy17610        160 LRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLT  239 (515)
Q Consensus       160 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~  239 (515)
                      .++.+|-+-|..+.|++.-.++++++.|.+|+||+..+++++..+ .+|...|.|..|+|....+++++-|.+|++||+.
T Consensus        87 ftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavl-tGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDis  165 (1202)
T KOG0292|consen   87 FTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVL-TGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDIS  165 (1202)
T ss_pred             hhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEE-ecCceEEEeeccCCccceEEEecccceEEEEeec
Confidence            999999999999999999999999999999999999999999998 7999999999999999999999999999999985


Q ss_pred             CCceeeEEeecc-ccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEE-cCccEEEEEEcCCCcEEEEEECCCe
Q psy17610        240 RESQSLQCVLKE-HTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMI-LPSMIMSAAYHPSEVQLITCSTNKM  317 (515)
Q Consensus       240 ~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~  317 (515)
                      .-..+..  -++ ..+......    +..=+.++.|-.|+          ..+. +...+.-++|+|.-..+++|+.|..
T Consensus       166 GLRkk~~--~pg~~e~~~~~~~----~~~dLfg~~DaVVK----------~VLEGHDRGVNwaAfhpTlpliVSG~DDRq  229 (1202)
T KOG0292|consen  166 GLRKKNK--APGSLEDQMRGQQ----GNSDLFGQTDAVVK----------HVLEGHDRGVNWAAFHPTLPLIVSGADDRQ  229 (1202)
T ss_pred             chhccCC--CCCCchhhhhccc----cchhhcCCcCeeee----------eeecccccccceEEecCCcceEEecCCcce
Confidence            2111100  000 000000000    00001222232221          1111 2234555566666666666666666


Q ss_pred             EEEEeCCCCc--eEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEE
Q psy17610        318 IDYWETCDGS--IIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIV  395 (515)
Q Consensus       318 i~~~d~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~  395 (515)
                      |++|.+..-+  .+.+..+|. +.|.++-|+|..+++++.++|++|++||+...+.+.+++...+....++.+|..++++
T Consensus       230 VKlWrmnetKaWEvDtcrgH~-nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~tfrrendRFW~laahP~lNLfA  308 (1202)
T KOG0292|consen  230 VKLWRMNETKAWEVDTCRGHY-NNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTFRRENDRFWILAAHPELNLFA  308 (1202)
T ss_pred             eeEEEeccccceeehhhhccc-CCcceEEecCccceeEecCCCccEEEEecccccceeeeeccCCeEEEEEecCCcceee
Confidence            6666554332  123344555 8999999999999999999999999999999999999988889999999999999777


Q ss_pred             EEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCee
Q psy17610        396 SVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSI  475 (515)
Q Consensus       396 ~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~  475 (515)
                      +| .|+.+.+|.++....                              .  .+.  .++.|+..- |..|+.+|+.+.+-
T Consensus       309 Ag-HDsGm~VFkleRErp------------------------------a--~~v--~~n~LfYvk-d~~i~~~d~~t~~d  352 (1202)
T KOG0292|consen  309 AG-HDSGMIVFKLERERP------------------------------A--YAV--NGNGLFYVK-DRFIRSYDLRTQKD  352 (1202)
T ss_pred             ee-cCCceEEEEEcccCc------------------------------e--EEE--cCCEEEEEc-cceEEeeecccccc
Confidence            66 677788888764321                              1  122  344444444 88999999988553


Q ss_pred             e--eeecccc--cceEEEEEEcCCCcEEEEe
Q psy17610        476 I--RSLEGSD--VAAVNCVDFVDDGKYFLTG  502 (515)
Q Consensus       476 ~--~~~~~~~--~~~v~~~~~s~~~~~l~s~  502 (515)
                      .  ..+....  ..++.++.++|....+..+
T Consensus       353 ~~v~~lr~~g~~~~~~~smsYNpae~~vlic  383 (1202)
T KOG0292|consen  353 TAVASLRRPGTLWQPPRSLSYNPAENAVLIC  383 (1202)
T ss_pred             ceeEeccCCCcccCCcceeeeccccCeEEEE
Confidence            3  3333221  2678899999977654444

>KOG0282|consensus

Probab=100.00  E-value=3.5e-39  Score=274.97  Aligned_cols=293  Identities=21%  Similarity=0.333  Sum_probs=255.7

Q ss_pred             EEEecCCCCCCeEEEEEcC-CCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEE
Q psy17610        201 KFIIPNAHNRGVTALAITQ-DGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVL  279 (515)
Q Consensus       201 ~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i  279 (515)
                      +..+ .+|...|+++.|.| .+.+|++++.|+.|+||++.. ...+++++.+|..+|..++|+++|..+++++.|+.+++
T Consensus       207 ~~~~-~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~-~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKl  284 (503)
T KOG0282|consen  207 SHNL-SGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYD-DRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKL  284 (503)
T ss_pred             eeec-cCCccccchhhhccceeeEEEecCCCceEEEEEEec-CcceehhhhcchhhhhhhhccccCCeeeeeecceeeee
Confidence            3444 79999999999999 899999999999999999974 57888999999999999999999999999999999999


Q ss_pred             EEcccceEEEEEEcCccEEEEEEcCCC-cEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCC
Q psy17610        280 WDLIKSTRLIIMILPSMIMSAAYHPSE-VQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGAD  358 (515)
Q Consensus       280 wd~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d  358 (515)
                      ||+++|++...+.....+.++.|+|++ +.+++|+.|+.|+.||+++++.++++..+- +.+..+.|-++|+.+++.++|
T Consensus       285 wDtETG~~~~~f~~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hL-g~i~~i~F~~~g~rFissSDd  363 (503)
T KOG0282|consen  285 WDTETGQVLSRFHLDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHL-GAILDITFVDEGRRFISSSDD  363 (503)
T ss_pred             eccccceEEEEEecCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhh-hheeeeEEccCCceEeeeccC
Confidence            999999999999999999999999998 889999999999999999999888887766 899999999999999999999


Q ss_pred             CeEEEEEccCCeeeeecc-CCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceee
Q psy17610        359 QIVKMWMYREGVPCFVGI-GHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLII  437 (515)
Q Consensus       359 g~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  437 (515)
                      +.++||+.+...++.... .+.-...++..+|++++++.-+.|..|.++.+...-....               ..+..-
T Consensus       364 ks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nk---------------kK~feG  428 (503)
T KOG0282|consen  364 KSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNK---------------KKRFEG  428 (503)
T ss_pred             ccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEecccccccCH---------------hhhhcc
Confidence            999999998887665443 2334567899999999999999999999998654321000               001111


Q ss_pred             ecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCC-cEEEEeecCCeEEEEE
Q psy17610        438 MILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDG-KYFLTGGADQIVKICL  512 (515)
Q Consensus       438 ~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~dg~v~iw~  512 (515)
                      ....+.-..+.|||||++|++|+.||.+.+||.++-+++..+..|. .++..+.|+|.. ..+|||+.||.|++|+
T Consensus       429 h~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~lkah~-~~ci~v~wHP~e~Skvat~~w~G~Ikiwd  503 (503)
T KOG0282|consen  429 HSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTTKLVSKLKAHD-QPCIGVDWHPVEPSKVATCGWDGLIKIWD  503 (503)
T ss_pred             eeccCceeeEEEcCCCCeEEeecCCccEEEeechhhhhhhccccCC-cceEEEEecCCCcceeEecccCceeEecC
Confidence            1123557789999999999999999999999999999999999997 999999999965 4799999999999996

>KOG1063|consensus

Probab=100.00  E-value=1.1e-35  Score=264.51  Aligned_cols=475  Identities=15%  Similarity=0.174  Sum_probs=341.6

Q ss_pred             CCCCeEEEEcCCCCCCcccccccceEEeeccc-------cccccccccccccccCcceeeeccceEEEEEecCCCcEEEE
Q psy17610         15 TSGDILKLNLNYPSDLSKVESDTAAVLMGCYG-------KLIKKKVSTKLKDVNAEDVSLYSAGVTALYLLKDDSGISSL   87 (515)
Q Consensus        15 ~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~   87 (515)
                      ..-.|.+||..+.-.......+...+.+.+.-       .+.++..++.+.+|....     .....+..+++ ..+.++
T Consensus        32 a~~~Iav~dp~k~~i~t~l~GH~a~VnC~~~l~~s~~~a~~vsG~sD~~v~lW~l~~-----~~~~~i~~~~g-~~~~~~  105 (764)
T KOG1063|consen   32 AGPAIAVADPEKILIVTTLDGHVARVNCVHWLPTSEIVAEMVSGDSDGRVILWKLRD-----EYLIKIYTIQG-HCKECV  105 (764)
T ss_pred             CCceEEEeCcccceeEEeccCCccceEEEEEcccccccceEEEccCCCcEEEEEEee-----hheEEEEeecC-cceeEE
Confidence            45577888877765666667776666665442       477788888888888761     22223333333 334444


Q ss_pred             EEecCCCEEEEEecCceEEEEECCCCc-------------------------------------------------eeEE
Q psy17610         88 QYNPVNNKVFVGTVNCEIFLIDMNSGF-------------------------------------------------TLTL  118 (515)
Q Consensus        88 ~~s~~~~~l~~~~~d~~i~iw~~~~~~-------------------------------------------------~~~~  118 (515)
                      +++..-....+...|+.+.+||.+..+                                                 ....
T Consensus       106 cv~a~~~~~~~~~ad~~v~vw~~~~~e~~~~~~~rf~~k~~ipLcL~~~~~~~~~lla~Ggs~~~v~~~s~~~d~f~~v~  185 (764)
T KOG1063|consen  106 CVVARSSVMTCKAADGTVSVWDKQQDEVFLLAVLRFEIKEAIPLCLAALKNNKTFLLACGGSKFVVDLYSSSADSFARVA  185 (764)
T ss_pred             EEEeeeeEEEeeccCceEEEeecCCCceeeehheehhhhhHhhHHHhhhccCCcEEEEecCcceEEEEeccCCcceeEEE
Confidence            444333333333567777777763211                                                 1223


Q ss_pred             eeccCccCeEEEEeCCCCc---EEEEEecCCcEEEEeCCCCc---------------------eeEE----------EEe
Q psy17610        119 VNTCHTSAIYDLQFPVNFS---SVFATCSKNDIRIWSVRTLN---------------------ELLR----------ISV  164 (515)
Q Consensus       119 ~~~~h~~~v~~~~~~~~~~---~l~~~~~d~~i~iw~~~~~~---------------------~~~~----------~~~  164 (515)
                      .+.||.+.|.+++|...+.   +|++++.|..||||.+.-+.                     ....          +.+
T Consensus       186 el~GH~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~eall~G  265 (764)
T KOG1063|consen  186 ELEGHTDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISFEALLMG  265 (764)
T ss_pred             EeeccchhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEehhhhhcC
Confidence            4668999999999976443   56666669999999875322                     1111          238


Q ss_pred             cCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCc--eEEEec----CCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEc
Q psy17610        165 MNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGK--LKFIIP----NAHNRGVTALAITQDGTRLLSGGGEGQVRIWKL  238 (515)
Q Consensus       165 ~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~--~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~  238 (515)
                      |.+.|.++.|+|.+..|++++.|.++.+|...+..  -+....    .+.........|+|+++.+++-+..|..++|..
T Consensus       266 HeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~Gg~hlWkt  345 (764)
T KOG1063|consen  266 HEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRTGGFHLWKT  345 (764)
T ss_pred             cccceEEEEEccchhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEecccCcEEEEec
Confidence            99999999999999999999999999999877652  222221    233456889999999999999999999999983


Q ss_pred             c-CCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEccc-ceEEEEE----EcCccEEEEEEcCCCcEEEEE
Q psy17610        239 T-RESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIK-STRLIIM----ILPSMIMSAAYHPSEVQLITC  312 (515)
Q Consensus       239 ~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~----~~~~~~~~~~~~~~~~~l~~~  312 (515)
                      . ...........+|.+.|+.++|+|.|+++++++.|.+-|++-.-. ...-..+    .+...+.++++-+....+++|
T Consensus       346 ~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~~~~FVSg  425 (764)
T KOG1063|consen  346 KDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNEDLQFVSG  425 (764)
T ss_pred             cCccceeeccccccccccceeeeecCCCCEEEEeccccceeeecccccccceeeecccccccccceeeehccCCceeeec
Confidence            2 223455566789999999999999999999999999999986541 1111222    233468888888877788888


Q ss_pred             ECCCeEEEEeCCCC-------------------------------------------ce---------------------
Q psy17610        313 STNKMIDYWETCDG-------------------------------------------SI---------------------  328 (515)
Q Consensus       313 ~~~~~i~~~d~~~~-------------------------------------------~~---------------------  328 (515)
                      .....+++|+....                                           ..                     
T Consensus       426 AdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L~ePP~  505 (764)
T KOG1063|consen  426 ADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCELTEPPT  505 (764)
T ss_pred             ccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchhccCCCh
Confidence            88888888875210                                           00                     


Q ss_pred             ------------EEEEecCCCccEEEEEEcCCCCEEEEEcCCC-----eEEEEEccCCeeeeeccCCCCCeeEEEECCCC
Q psy17610        329 ------------IRSLEGSDVAAVNCVDFVDDGKYFLTGGADQ-----IVKMWMYREGVPCFVGIGHAASITKIKISPDK  391 (515)
Q Consensus       329 ------------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~  391 (515)
                                  ++++.+ |...|.+++.+|+++++|+++...     .|++|+..+-.....+.+|+-.|+.++||||+
T Consensus       506 EdqLq~~tLwPEv~KLYG-HGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l~FSpdg  584 (764)
T KOG1063|consen  506 EDQLQQNTLWPEVHKLYG-HGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTVTRLAFSPDG  584 (764)
T ss_pred             HHHHHHhccchhhHHhcc-CceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccceEEEEEEECCCC
Confidence                        001112 236799999999999999988643     59999999988888999999999999999999


Q ss_pred             cEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecC
Q psy17610        392 KVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETC  471 (515)
Q Consensus       392 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~  471 (515)
                      ++|++.+.|.++.+|...........                ......|...|.++.|+|++.++|+++.|.+|++|...
T Consensus       585 ~~LLsvsRDRt~sl~~~~~~~~~e~~----------------fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~  648 (764)
T KOG1063|consen  585 RYLLSVSRDRTVSLYEVQEDIKDEFR----------------FACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEP  648 (764)
T ss_pred             cEEEEeecCceEEeeeeecccchhhh----------------hccccccceEEEEcccCcccceeEEecCCceEEEEecc
Confidence            99999999999999987544321111                11134567779999999999999999999999999998


Q ss_pred             CC--eeeee--ecccccceEEEEEEcCC-----CcEEEEeecCCeEEEEEE
Q psy17610        472 DG--SIIRS--LEGSDVAAVNCVDFVDD-----GKYFLTGGADQIVKICLY  513 (515)
Q Consensus       472 ~~--~~~~~--~~~~~~~~v~~~~~s~~-----~~~l~s~~~dg~v~iw~~  513 (515)
                      +.  +.+..  ...+ ..+|++++|.|-     +..++.|-+.|.|.+|.+
T Consensus       649 ~~~d~~i~~~a~~~~-~~aVTAv~~~~~~~~e~~~~vavGle~GeI~l~~~  698 (764)
T KOG1063|consen  649 DLRDKYISRFACLKF-SLAVTAVAYLPVDHNEKGDVVAVGLEKGEIVLWRR  698 (764)
T ss_pred             Cchhhhhhhhchhcc-CCceeeEEeeccccccccceEEEEecccEEEEEec
Confidence            87  44433  2223 378999998762     336778889999999985

>KOG2048|consensus

Probab=100.00  E-value=2.1e-34  Score=255.91  Aligned_cols=485  Identities=14%  Similarity=0.101  Sum_probs=354.6

Q ss_pred             CccCCCCceEEEecCCCCeEEEEcCCCCCCcc-cccccc----eEEeeccccccccccccccccccCcceeeeccceEEE
Q psy17610          1 MKTTPNDEFAYCGTTSGDILKLNLNYPSDLSK-VESDTA----AVLMGCYGKLIKKKVSTKLKDVNAEDVSLYSAGVTAL   75 (515)
Q Consensus         1 ~~~~~~~~~~~~g~~~g~i~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (515)
                      |+|+.+...|++|-++|.|.+|+++.+-+... +..++.    .+.-+..+||++....+.+-.|+..+.+.      ..
T Consensus        31 lA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e~~RLFS~g~sg~i~EwDl~~lk~------~~  104 (691)
T KOG2048|consen   31 LAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWAEGGRLFSSGLSGSITEWDLHTLKQ------KY  104 (691)
T ss_pred             EEEeccCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEccCCeEEeecCCceEEEEecccCce------eE
Confidence            57888999999999999999999987654433 333321    23334578999999999999999977653      44


Q ss_pred             EEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEE-eeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCC
Q psy17610         76 YLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTL-VNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVR  154 (515)
Q Consensus        76 ~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~  154 (515)
                      ......+.|.+++.+|.+..+++|+.||.+..++...++.... .+...++.|.++.|+|++..++.||.||.|++||+.
T Consensus       105 ~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~  184 (691)
T KOG2048|consen  105 NIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVK  184 (691)
T ss_pred             EecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCceEEEEEcC
Confidence            4555789999999999999999999999888888887543332 444466899999999999999999999999999999


Q ss_pred             CCceeEEEE-------e-cCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEE
Q psy17610        155 TLNELLRIS-------V-MNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLS  226 (515)
Q Consensus       155 ~~~~~~~~~-------~-~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  226 (515)
                      ++..+....       . ...-|+++.|-.++ .|++|...|+|.+||...+.++... ..|...|.+++..++++++++
T Consensus       185 ~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~-tI~sgDS~G~V~FWd~~~gTLiqS~-~~h~adVl~Lav~~~~d~vfs  262 (691)
T KOG2048|consen  185 SGQTLHIITMQLDRLSKREPTIVWSVLFLRDS-TIASGDSAGTVTFWDSIFGTLIQSH-SCHDADVLALAVADNEDRVFS  262 (691)
T ss_pred             CCceEEEeeecccccccCCceEEEEEEEeecC-cEEEecCCceEEEEcccCcchhhhh-hhhhcceeEEEEcCCCCeEEE
Confidence            998777322       1 33457888888665 6999999999999999999998888 689999999999999999999


Q ss_pred             ecCCCcEEEEEccCCceee--EEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEE-EcCccEEEEEEc
Q psy17610        227 GGGEGQVRIWKLTRESQSL--QCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIM-ILPSMIMSAAYH  303 (515)
Q Consensus       227 ~~~d~~i~iw~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~  303 (515)
                      ++.|+.|..|.......+.  ......|...|.+++..++  .+++|+.|.++.+-..+..+..... ....+-.+....
T Consensus       263 aGvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~~~--~l~sgG~d~~l~i~~s~~~~~~~h~~~~~~p~~~~v~~  340 (691)
T KOG2048|consen  263 AGVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVIEN--ALISGGRDFTLAICSSREFKNMDHRQKNLFPASDRVSV  340 (691)
T ss_pred             ccCCCceEEEEecCCccceeeeccccCCcccceeeeeecc--eEEecceeeEEEEccccccCchhhhccccccccceeec
Confidence            9999999999886543322  2234568889999999876  8899999998887665442211111 111111122222


Q ss_pred             CCCcEEEEEECCCeEEEEeCCCC--------ceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeee--
Q psy17610        304 PSEVQLITCSTNKMIDYWETCDG--------SIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCF--  373 (515)
Q Consensus       304 ~~~~~l~~~~~~~~i~~~d~~~~--------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~--  373 (515)
                      .-.++++.--....+.+|.+.+.        ..+..+.......|.|.+.+|+|++++.+.-. .+++|.+...-.+.  
T Consensus       341 a~~~~L~~~w~~h~v~lwrlGS~~~~g~~~~~~Llkl~~k~~~nIs~~aiSPdg~~Ia~st~~-~~~iy~L~~~~~vk~~  419 (691)
T KOG2048|consen  341 APENRLLVLWKAHGVDLWRLGSVILQGEYNYIHLLKLFTKEKENISCAAISPDGNLIAISTVS-RTKIYRLQPDPNVKVI  419 (691)
T ss_pred             CccceEEEEeccccccceeccCcccccccChhhheeeecCCccceeeeccCCCCCEEEEeecc-ceEEEEeccCcceeEE
Confidence            22344444444556667766544        22344444555889999999999999988743 57888776522211  


Q ss_pred             ---eccCCCCCeeEEEECCCCcEEEEEe-CCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeee
Q psy17610        374 ---VGIGHAASITKIKISPDKKVIVSVS-ADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAY  449 (515)
Q Consensus       374 ---~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  449 (515)
                         ......-....+.|+-|++.++.++ .+..+...++.............                ......|..+..
T Consensus       420 ~v~~~~~~~~~a~~i~ftid~~k~~~~s~~~~~le~~el~~ps~kel~~~~~----------------~~~~~~I~~l~~  483 (691)
T KOG2048|consen  420 NVDDVPLALLDASAISFTIDKNKLFLVSKNIFSLEEFELETPSFKELKSIQS----------------QAKCPSISRLVV  483 (691)
T ss_pred             EeccchhhhccceeeEEEecCceEEEEecccceeEEEEecCcchhhhhcccc----------------ccCCCcceeEEE
Confidence               1222334567888988888888887 56677777766543221111110                022355899999


Q ss_pred             ccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcC-CCcEEEEeecCCeEEEEEE
Q psy17610        450 HPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVD-DGKYFLTGGADQIVKICLY  513 (515)
Q Consensus       450 s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg~v~iw~~  513 (515)
                      ||+|+++|+.+..|.|.+|++++++......... ..+++++|+| +.+.|+.+..|+.+.-||.
T Consensus       484 SsdG~yiaa~~t~g~I~v~nl~~~~~~~l~~rln-~~vTa~~~~~~~~~~lvvats~nQv~efdi  547 (691)
T KOG2048|consen  484 SSDGNYIAAISTRGQIFVYNLETLESHLLKVRLN-IDVTAAAFSPFVRNRLVVATSNNQVFEFDI  547 (691)
T ss_pred             cCCCCEEEEEeccceEEEEEcccceeecchhccC-cceeeeeccccccCcEEEEecCCeEEEEec
Confidence            9999999999999999999999887655544444 7899999994 5667888999998888775

>KOG0643|consensus

Probab=100.00  E-value=6.2e-37  Score=241.52  Aligned_cols=290  Identities=19%  Similarity=0.281  Sum_probs=249.4

Q ss_pred             EEEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeC
Q psy17610         74 ALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSV  153 (515)
Q Consensus        74 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~  153 (515)
                      .+.+.+|+.+++.+.|+.+|.+|.+++.|....+|-..+|+.+. .+.||++.|.|+..+-+.+.+++++.|.++++||+
T Consensus         3 pi~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlG-ty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv   81 (327)
T KOG0643|consen    3 PILLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLG-TYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDV   81 (327)
T ss_pred             ccccccCccccceEEecCCCcEEEEecCCCCceEEEecCCceee-eecCCCceEEEEEecCCcceeeeccccceeEEEEc
Confidence            35678899999999999999999999999999999988876655 56789999999999999999999999999999999


Q ss_pred             CCCceeEEEEecCeEEEEEEEeeCCCEEEEEeC-----CCeEEEEecC-------CCceEEEecCCCCCCeEEEEEcCCC
Q psy17610        154 RTLNELLRISVMNMICACIVFTYDGKAILSGWN-----DGFIRCFTPQ-------SGKLKFIIPNAHNRGVTALAITQDG  221 (515)
Q Consensus       154 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~~~~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~  221 (515)
                      ++|+++..++ ...+|..+.|+++|++++....     .+.|.++|++       ..++...+ ..+...++.+-|.|-+
T Consensus        82 ~tGk~la~~k-~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI-~t~~skit~a~Wg~l~  159 (327)
T KOG0643|consen   82 ETGKQLATWK-TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKI-PTPDSKITSALWGPLG  159 (327)
T ss_pred             CCCcEEEEee-cCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEe-cCCccceeeeeecccC
Confidence            9999999887 4568999999999998887654     4679999987       44556666 4677899999999999


Q ss_pred             CEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEE
Q psy17610        222 TRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAA  301 (515)
Q Consensus       222 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~  301 (515)
                      +.|++|.+||.|..||++++ ...+.....|...|+.+++++|..++++++.|.+-++||+.+.+.++.+....++.+.+
T Consensus       160 ~~ii~Ghe~G~is~~da~~g-~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~te~PvN~aa  238 (327)
T KOG0643|consen  160 ETIIAGHEDGSISIYDARTG-KELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYTTERPVNTAA  238 (327)
T ss_pred             CEEEEecCCCcEEEEEcccC-ceeeechhhhccccccccccCCcceEEecccCccceeeeccceeeEEEeeeccccccee
Confidence            99999999999999999643 45666778899999999999999999999999999999999999999999999999999


Q ss_pred             EcCCCcEEEEEECCCeE--------------EEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEcc
Q psy17610        302 YHPSEVQLITCSTNKMI--------------DYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYR  367 (515)
Q Consensus       302 ~~~~~~~l~~~~~~~~i--------------~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~  367 (515)
                      ++|....++.++.....              ++|++-..+.+..+++|- ++|++++|+|+|+..++|++||.|++....
T Consensus       239 isP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHF-GPINsvAfhPdGksYsSGGEDG~VR~h~Fd  317 (327)
T KOG0643|consen  239 ISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHF-GPINSVAFHPDGKSYSSGGEDGYVRLHHFD  317 (327)
T ss_pred             cccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccc-cCcceeEECCCCcccccCCCCceEEEEEec
Confidence            99988877776543222              222222234455666666 999999999999999999999999998665


Q ss_pred             C
Q psy17610        368 E  368 (515)
Q Consensus       368 ~  368 (515)
                      .
T Consensus       318 ~  318 (327)
T KOG0643|consen  318 S  318 (327)
T ss_pred             c
Confidence            4

>KOG0643|consensus

Probab=100.00  E-value=1.2e-36  Score=239.90  Aligned_cols=283  Identities=19%  Similarity=0.257  Sum_probs=244.8

Q ss_pred             CCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccc
Q psy17610        206 NAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKS  285 (515)
Q Consensus       206 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~  285 (515)
                      .+|..+++.+.++.+|.+|++++.|....+|-.  ..++.+.++.+|++.|.++..+.+.+++++|+.|.++++||++++
T Consensus         7 ~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s--~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tG   84 (327)
T KOG0643|consen    7 QGHERPLTQIKYNREGDLLFSCAKDSTPTVWYS--LNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETG   84 (327)
T ss_pred             ccCccccceEEecCCCcEEEEecCCCCceEEEe--cCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCC
Confidence            689999999999999999999999999999987  456778899999999999999999999999999999999999999


Q ss_pred             eEEEEEEcCccEEEEEEcCCCcEEEEEEC-----CCeEEEEeCC-------CCceEEEEecCCCccEEEEEEcCCCCEEE
Q psy17610        286 TRLIIMILPSMIMSAAYHPSEVQLITCST-----NKMIDYWETC-------DGSIIRSLEGSDVAAVNCVDFVDDGKYFL  353 (515)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~i~~~d~~-------~~~~~~~~~~~~~~~i~~~~~~~~~~~l~  353 (515)
                      +.+..+..+.++..+.|++++++++....     .+.|.++|++       ..++...+..+. ..++.+-|.|-+++|+
T Consensus        85 k~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~-skit~a~Wg~l~~~ii  163 (327)
T KOG0643|consen   85 KQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPD-SKITSALWGPLGETII  163 (327)
T ss_pred             cEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCc-cceeeeeecccCCEEE
Confidence            99999999999999999999999888765     4679999988       456677888777 8899999999999999


Q ss_pred             EEcCCCeEEEEEccCC-eeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccc
Q psy17610        354 TGGADQIVKMWMYREG-VPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARS  432 (515)
Q Consensus       354 ~~~~dg~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~  432 (515)
                      +|.+||.|.+||++++ +.+.....|...|+.|+++||..++++++.|.+-++||+.+.+..                  
T Consensus       164 ~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~------------------  225 (327)
T KOG0643|consen  164 AGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVL------------------  225 (327)
T ss_pred             EecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeeccceeeE------------------
Confidence            9999999999999998 455666889999999999999999999999999999999875421                  


Q ss_pred             cceeeecCcccEEEeeeccCCcEEEEeecCCe--------------EEEEecCCCeeeeeecccccceEEEEEEcCCCcE
Q psy17610        433 TRLIIMILPSMIMSAAYHPSEVQLITCSTNKM--------------IDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKY  498 (515)
Q Consensus       433 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~--------------v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  498 (515)
                         .......++++.+++|-..+++.|+....              -++|++-..+.+....+|- ++|++++|+|+|+.
T Consensus       226 ---Kty~te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHF-GPINsvAfhPdGks  301 (327)
T KOG0643|consen  226 ---KTYTTERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHF-GPINSVAFHPDGKS  301 (327)
T ss_pred             ---EEeeecccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccc-cCcceeEECCCCcc
Confidence               11123356899999998887777653322              2344444445667788887 99999999999999


Q ss_pred             EEEeecCCeEEEEEE
Q psy17610        499 FLTGGADQIVKICLY  513 (515)
Q Consensus       499 l~s~~~dg~v~iw~~  513 (515)
                      .++|++||.||+..|
T Consensus       302 YsSGGEDG~VR~h~F  316 (327)
T KOG0643|consen  302 YSSGGEDGYVRLHHF  316 (327)
T ss_pred             cccCCCCceEEEEEe
Confidence            999999999999765

>PLN00181 protein SPA1-RELATED; Provisional

Probab=100.00  E-value=3.5e-35  Score=295.17  Aligned_cols=310  Identities=18%  Similarity=0.249  Sum_probs=247.8

Q ss_pred             CCeEEEEecCCCceEEEec----CCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCc--e----eeEEeeccccCce
Q psy17610        187 DGFIRCFTPQSGKLKFIIP----NAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRES--Q----SLQCVLKEHTSSV  256 (515)
Q Consensus       187 dg~i~~~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~--~----~~~~~~~~~~~~v  256 (515)
                      +|..++|+....+....+.    ..|...|.+++|+|+++++++|+.|+.|++|+.....  .    .....+. +...+
T Consensus       457 ~gl~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v  535 (793)
T PLN00181        457 EGLCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SRSKL  535 (793)
T ss_pred             hhhhhhhcccceEEEEeeccccccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEec-ccCce
Confidence            5667888877665544332    3488999999999999999999999999999975311  0    1122222 34678


Q ss_pred             EEEEEec-CCCEEEEEeCCCcEEEEEcccceEEEEEEc-CccEEEEEEcC-CCcEEEEEECCCeEEEEeCCCCceEEEEe
Q psy17610        257 SVIQIKS-DSKEAMSASTDGTCVLWDLIKSTRLIIMIL-PSMIMSAAYHP-SEVQLITCSTNKMIDYWETCDGSIIRSLE  333 (515)
Q Consensus       257 ~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~-~~~~l~~~~~~~~i~~~d~~~~~~~~~~~  333 (515)
                      .+++|++ ++.++++++.||+|++||+.+++.+..+.. ...|.+++|+| ++.+|++++.|+.|++||++++..+..+.
T Consensus       536 ~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~  615 (793)
T PLN00181        536 SGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIK  615 (793)
T ss_pred             eeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEe
Confidence            9999987 478899999999999999998888777754 45799999997 78899999999999999999999888887


Q ss_pred             cCCCccEEEEEEc-CCCCEEEEEcCCCeEEEEEccCCe-eeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCC
Q psy17610        334 GSDVAAVNCVDFV-DDGKYFLTGGADQIVKMWMYREGV-PCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPEL  411 (515)
Q Consensus       334 ~~~~~~i~~~~~~-~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  411 (515)
                      .+  ..+.++.|+ +++.+|++|+.||.|++||+++.+ ++..+.+|...|.++.|. ++.+|++++.|+.|++||+...
T Consensus       616 ~~--~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~~~  692 (793)
T PLN00181        616 TK--ANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSMS  692 (793)
T ss_pred             cC--CCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEe-CCCEEEEEECCCEEEEEeCCCC
Confidence            54  578899995 579999999999999999998765 567778999999999997 6789999999999999998653


Q ss_pred             cCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeec-----------
Q psy17610        412 EDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLE-----------  480 (515)
Q Consensus       412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~-----------  480 (515)
                      .....              ......+.+|...+..++|+|++++|++|+.|+.|++|+.....++..+.           
T Consensus       693 ~~~~~--------------~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~  758 (793)
T PLN00181        693 ISGIN--------------ETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLE  758 (793)
T ss_pred             ccccC--------------CcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCCCceEEEecccCCcccccc
Confidence            21000              01112344567778999999999999999999999999987654432221           


Q ss_pred             -ccccceEEEEEEcCCCcEEEEeecCCeEEEEEEe
Q psy17610        481 -GSDVAAVNCVDFVDDGKYFLTGGADQIVKICLYI  514 (515)
Q Consensus       481 -~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~  514 (515)
                       .++...|.+++|+|++..|++|+.||.|+||+++
T Consensus       759 ~~~~~~~V~~v~ws~~~~~lva~~~dG~I~i~~~~  793 (793)
T PLN00181        759 VDDASQFISSVCWRGQSSTLVAANSTGNIKILEMV  793 (793)
T ss_pred             cCCCCcEEEEEEEcCCCCeEEEecCCCcEEEEecC
Confidence             1122579999999999999999999999999975

>PLN00181 protein SPA1-RELATED; Provisional

Probab=100.00  E-value=3.1e-35  Score=295.59  Aligned_cols=313  Identities=18%  Similarity=0.243  Sum_probs=251.0

Q ss_pred             CCcEEEEeCCCCceeEEE-----EecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCC----c----eEEEecCCCCCC
Q psy17610        145 KNDIRIWSVRTLNELLRI-----SVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSG----K----LKFIIPNAHNRG  211 (515)
Q Consensus       145 d~~i~iw~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~----~----~~~~~~~~~~~~  211 (515)
                      +|.+++|+..+.+....+     ..|...|.+++|+|+++++++|+.|+.|++|+....    .    ....+  .+...
T Consensus       457 ~gl~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~--~~~~~  534 (793)
T PLN00181        457 EGLCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVEL--ASRSK  534 (793)
T ss_pred             hhhhhhhcccceEEEEeeccccccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEe--cccCc
Confidence            567888888765544333     347889999999999999999999999999997542    1    11222  34567


Q ss_pred             eEEEEEcC-CCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEec-CCCEEEEEeCCCcEEEEEcccceEEE
Q psy17610        212 VTALAITQ-DGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKS-DSKEAMSASTDGTCVLWDLIKSTRLI  289 (515)
Q Consensus       212 v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~  289 (515)
                      +.+++|++ ++.+|++++.||.|++||+.  +......+.+|...|.+++|+| ++.+|++++.|++|++||++++....
T Consensus       535 v~~l~~~~~~~~~las~~~Dg~v~lWd~~--~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~  612 (793)
T PLN00181        535 LSGICWNSYIKSQVASSNFEGVVQVWDVA--RSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIG  612 (793)
T ss_pred             eeeEEeccCCCCEEEEEeCCCeEEEEECC--CCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEE
Confidence            99999987 57899999999999999995  4456677889999999999996 78899999999999999999998888


Q ss_pred             EEEcCccEEEEEEc-CCCcEEEEEECCCeEEEEeCCCCc-eEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEcc
Q psy17610        290 IMILPSMIMSAAYH-PSEVQLITCSTNKMIDYWETCDGS-IIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYR  367 (515)
Q Consensus       290 ~~~~~~~~~~~~~~-~~~~~l~~~~~~~~i~~~d~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~  367 (515)
                      .+.....+.++.|+ +++.++++|+.|+.|++||+++.+ .+..+..|. ..|.++.|. ++.+|++++.|+.|++||++
T Consensus       613 ~~~~~~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~-~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~  690 (793)
T PLN00181        613 TIKTKANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHS-KTVSYVRFV-DSSTLVSSSTDNTLKLWDLS  690 (793)
T ss_pred             EEecCCCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCC-CCEEEEEEe-CCCEEEEEECCCEEEEEeCC
Confidence            88877789999995 578999999999999999998876 455666555 789999997 67899999999999999997


Q ss_pred             C------CeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCc
Q psy17610        368 E------GVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILP  441 (515)
Q Consensus       368 ~------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  441 (515)
                      .      ..++..+.+|...+..++|+|++++|++|+.|+.+++|+..........      .. .............+.
T Consensus       691 ~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~------~~-~~~~~~~~~~~~~~~  763 (793)
T PLN00181        691 MSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSY------KF-KTIDPVSGLEVDDAS  763 (793)
T ss_pred             CCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCCCceEEE------ec-ccCCcccccccCCCC
Confidence            4      3567788899999999999999999999999999999997543211000      00 000000001122345


Q ss_pred             ccEEEeeeccCCcEEEEeecCCeEEEEec
Q psy17610        442 SMIMSAAYHPSEVQLITCSTNKMIDYWET  470 (515)
Q Consensus       442 ~~i~~~~~s~~~~~l~~~~~dg~v~iwd~  470 (515)
                      ..|.+++|+|++..|++|+.+|.|++|++
T Consensus       764 ~~V~~v~ws~~~~~lva~~~dG~I~i~~~  792 (793)
T PLN00181        764 QFISSVCWRGQSSTLVAANSTGNIKILEM  792 (793)
T ss_pred             cEEEEEEEcCCCCeEEEecCCCcEEEEec
Confidence            67999999999999999999999999986

>KOG1407|consensus

Probab=100.00  E-value=1.2e-35  Score=233.60  Aligned_cols=284  Identities=20%  Similarity=0.241  Sum_probs=250.5

Q ss_pred             CCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEec-CCCEEEEEeCCCcEEEEEccc
Q psy17610        206 NAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKS-DSKEAMSASTDGTCVLWDLIK  284 (515)
Q Consensus       206 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~  284 (515)
                      .+|...+.+++|+.+|..|++|+.|+++.+|++............+|.+.|..++|+| +...+++++.|.+|++||++.
T Consensus        17 ~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r~   96 (313)
T KOG1407|consen   17 QGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRS   96 (313)
T ss_pred             hhhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEEecc
Confidence            5788999999999999999999999999999997665555556788999999999987 567899999999999999999


Q ss_pred             ceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEE
Q psy17610        285 STRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMW  364 (515)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~  364 (515)
                      +++.........-..+.|+|++.+++++..|..|.+.|.++.+.....+..  ..+..+.|+-++.+++.....|+|.|.
T Consensus        97 ~k~~~~i~~~~eni~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~--~e~ne~~w~~~nd~Fflt~GlG~v~IL  174 (313)
T KOG1407|consen   97 GKCTARIETKGENINITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFK--FEVNEISWNNSNDLFFLTNGLGCVEIL  174 (313)
T ss_pred             CcEEEEeeccCcceEEEEcCCCCEEEEecCcccEEEEEecccceeehhccc--ceeeeeeecCCCCEEEEecCCceEEEE
Confidence            999999999988888999999999999999999999999998888777655  577888999888888888778999999


Q ss_pred             EccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccE
Q psy17610        365 MYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMI  444 (515)
Q Consensus       365 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  444 (515)
                      .....+++..+..|.....++.|+|+|+++|+|+.|-.+.+||++..-.                    ...+.-+.-+|
T Consensus       175 sypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC--------------------~R~isRldwpV  234 (313)
T KOG1407|consen  175 SYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELIC--------------------ERCISRLDWPV  234 (313)
T ss_pred             eccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhh--------------------heeeccccCce
Confidence            9999999999999999999999999999999999999999999876432                    11222344569


Q ss_pred             EEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecC---------CeEEEEEE
Q psy17610        445 MSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGAD---------QIVKICLY  513 (515)
Q Consensus       445 ~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d---------g~v~iw~~  513 (515)
                      +.+.||.||++||++++|-.|-|-++++|..+..++..  ++...++|+|...+||.+.+|         |+|++|-+
T Consensus       235 RTlSFS~dg~~lASaSEDh~IDIA~vetGd~~~eI~~~--~~t~tVAWHPk~~LLAyA~ddk~~d~~reag~vKiFG~  310 (313)
T KOG1407|consen  235 RTLSFSHDGRMLASASEDHFIDIAEVETGDRVWEIPCE--GPTFTVAWHPKRPLLAYACDDKDGDSNREAGTVKIFGL  310 (313)
T ss_pred             EEEEeccCcceeeccCccceEEeEecccCCeEEEeecc--CCceeEEecCCCceeeEEecCCCCccccccceeEEecC
Confidence            99999999999999999999999999999999888764  789999999999999988764         67887754

>KOG0278|consensus

Probab=100.00  E-value=3.3e-37  Score=240.70  Aligned_cols=292  Identities=18%  Similarity=0.317  Sum_probs=255.7

Q ss_pred             EEEEecCCCcEEEEEEec---CCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEE
Q psy17610         74 ALYLLKDDSGISSLQYNP---VNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRI  150 (515)
Q Consensus        74 ~~~~~~~~~~v~~~~~s~---~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~i  150 (515)
                      .+...+|..+|..++|||   +|-+|++++.|+.=.+-+-++|.-+. .+.||.++|.+..++.+...-++++.|-+-++
T Consensus         7 pl~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwig-tfeghkgavw~~~l~~na~~aasaaadftakv   85 (334)
T KOG0278|consen    7 PLTCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWIG-TFEGHKGAVWSATLNKNATRAASAAADFTAKV   85 (334)
T ss_pred             ceEEcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcEE-eeeccCcceeeeecCchhhhhhhhcccchhhh
Confidence            456678999999999997   78899999999999998888875444 56789999999999999877888888999999


Q ss_pred             EeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCC
Q psy17610        151 WSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGE  230 (515)
Q Consensus       151 w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  230 (515)
                      ||.-+|..+..+. |...|.+++|+.|.++|++|+.+..+++||++..+....-..+|.+.|..+.|....+.+++++.|
T Consensus        86 w~a~tgdelhsf~-hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd  164 (334)
T KOG0278|consen   86 WDAVTGDELHSFE-HKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADD  164 (334)
T ss_pred             hhhhhhhhhhhhh-hhheeeeEEecccchhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeeccC
Confidence            9999999998886 888999999999999999999999999999987665433337999999999999988999999999


Q ss_pred             CcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEE
Q psy17610        231 GQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLI  310 (515)
Q Consensus       231 ~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  310 (515)
                      ++||+||.++..  ..+.+. ...+|+++.++++|+++.++ ..+.|.+||..+...++.+..|..|.+..++|+...++
T Consensus       165 ~tVRLWD~rTgt--~v~sL~-~~s~VtSlEvs~dG~ilTia-~gssV~Fwdaksf~~lKs~k~P~nV~SASL~P~k~~fV  240 (334)
T KOG0278|consen  165 KTVRLWDHRTGT--EVQSLE-FNSPVTSLEVSQDGRILTIA-YGSSVKFWDAKSFGLLKSYKMPCNVESASLHPKKEFFV  240 (334)
T ss_pred             CceEEEEeccCc--EEEEEe-cCCCCcceeeccCCCEEEEe-cCceeEEeccccccceeeccCccccccccccCCCceEE
Confidence            999999996544  344433 35679999999999866554 45789999999999999999999999999999999999


Q ss_pred             EEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCee
Q psy17610        311 TCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVP  371 (515)
Q Consensus       311 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~  371 (515)
                      +|++|..++.||..+++.+..+...+.++|.|+.|+|+|...++|++||+|++|....++.
T Consensus       241 aGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~~~  301 (334)
T KOG0278|consen  241 AGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTTPGKT  301 (334)
T ss_pred             ecCcceEEEEEeccCCceeeecccCCCCceEEEEECCCCceeeccCCCceEEEEEecCCCc
Confidence            9999999999999999999997444449999999999999999999999999999866543

>KOG2048|consensus

Probab=100.00  E-value=6.7e-34  Score=252.72  Aligned_cols=418  Identities=16%  Similarity=0.222  Sum_probs=300.7

Q ss_pred             CCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCc-cCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCce
Q psy17610         80 DDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHT-SAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNE  158 (515)
Q Consensus        80 ~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~  158 (515)
                      -..+|++|||+.+.+.||++-.+|.|.+|++..+......+.++. ..|.+++|++. .+|++.+.+|.|.-||+.++++
T Consensus        24 ~Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e~-~RLFS~g~sg~i~EwDl~~lk~  102 (691)
T KOG2048|consen   24 KPSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWAEG-GRLFSSGLSGSITEWDLHTLKQ  102 (691)
T ss_pred             eccceEEEEEeccCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEccC-CeEEeecCCceEEEEecccCce
Confidence            468999999999999999999999999999999888777776654 57999999955 5999999999999999999999


Q ss_pred             eEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEec-CCCCCCeEEEEEcCCCCEEEEecCCCcEEEEE
Q psy17610        159 LLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIP-NAHNRGVTALAITQDGTRLLSGGGEGQVRIWK  237 (515)
Q Consensus       159 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~  237 (515)
                      +..+....+.|++++.+|.+..+++|+.||.+..++...++...... ....+.|.+++|+|++..+++|+.||.|++||
T Consensus       103 ~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd  182 (691)
T KOG2048|consen  103 KYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWD  182 (691)
T ss_pred             eEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCceEEEEE
Confidence            99999999999999999999999999999988888888887755432 33458899999999999999999999999999


Q ss_pred             ccCCceeeEEe-----ecc-ccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEc-CccEEEEEEcCCCcEEE
Q psy17610        238 LTRESQSLQCV-----LKE-HTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMIL-PSMIMSAAYHPSEVQLI  310 (515)
Q Consensus       238 ~~~~~~~~~~~-----~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~  310 (515)
                      ...+....+..     +.. ..--|.++.+-.+ ..+++|...|+|.+||...+..++.+.. ...+.+++..+++.+++
T Consensus       183 ~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd-~tI~sgDS~G~V~FWd~~~gTLiqS~~~h~adVl~Lav~~~~d~vf  261 (691)
T KOG2048|consen  183 VKSGQTLHIITMQLDRLSKREPTIVWSVLFLRD-STIASGDSAGTVTFWDSIFGTLIQSHSCHDADVLALAVADNEDRVF  261 (691)
T ss_pred             cCCCceEEEeeecccccccCCceEEEEEEEeec-CcEEEecCCceEEEEcccCcchhhhhhhhhcceeEEEEcCCCCeEE
Confidence            97555443211     111 2334677777755 5689999999999999999988877754 46899999999999999


Q ss_pred             EEECCCeEEEEeCCCCce---EEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeE-EE
Q psy17610        311 TCSTNKMIDYWETCDGSI---IRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITK-IK  386 (515)
Q Consensus       311 ~~~~~~~i~~~d~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~-~~  386 (515)
                      +++.|+.+..|...+...   .......+...+++++..++  .+++|+.|..+.+-..+..+..........+-.+ +.
T Consensus       262 saGvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~~~--~l~sgG~d~~l~i~~s~~~~~~~h~~~~~~p~~~~v~  339 (691)
T KOG2048|consen  262 SAGVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVIEN--ALISGGRDFTLAICSSREFKNMDHRQKNLFPASDRVS  339 (691)
T ss_pred             EccCCCceEEEEecCCccceeeeccccCCcccceeeeeecc--eEEecceeeEEEEccccccCchhhhccccccccceee
Confidence            999999999988777644   22333445578999999877  8999999999988765442111111000011111 22


Q ss_pred             ECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEee------
Q psy17610        387 ISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCS------  460 (515)
Q Consensus       387 ~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~------  460 (515)
                      ..|.. +|..--.+..+.+|.+............           ............|.+.+.||+|++++.+.      
T Consensus       340 ~a~~~-~L~~~w~~h~v~lwrlGS~~~~g~~~~~-----------~Llkl~~k~~~nIs~~aiSPdg~~Ia~st~~~~~i  407 (691)
T KOG2048|consen  340 VAPEN-RLLVLWKAHGVDLWRLGSVILQGEYNYI-----------HLLKLFTKEKENISCAAISPDGNLIAISTVSRTKI  407 (691)
T ss_pred             cCccc-eEEEEeccccccceeccCcccccccChh-----------hheeeecCCccceeeeccCCCCCEEEEeeccceEE
Confidence            33333 3333334556777776554221110000           00111112234477777777777777665      


Q ss_pred             -----------------------------------------cCCeEEEEecCCC--eeeeeecc-cccceEEEEEEcCCC
Q psy17610        461 -----------------------------------------TNKMIDYWETCDG--SIIRSLEG-SDVAAVNCVDFVDDG  496 (515)
Q Consensus       461 -----------------------------------------~dg~v~iwd~~~~--~~~~~~~~-~~~~~v~~~~~s~~~  496 (515)
                                                               ....+..+++++.  +.+..+.. .....|..++.||+|
T Consensus       408 y~L~~~~~vk~~~v~~~~~~~~~a~~i~ftid~~k~~~~s~~~~~le~~el~~ps~kel~~~~~~~~~~~I~~l~~SsdG  487 (691)
T KOG2048|consen  408 YRLQPDPNVKVINVDDVPLALLDASAISFTIDKNKLFLVSKNIFSLEEFELETPSFKELKSIQSQAKCPSISRLVVSSDG  487 (691)
T ss_pred             EEeccCcceeEEEeccchhhhccceeeEEEecCceEEEEecccceeEEEEecCcchhhhhccccccCCCcceeEEEcCCC
Confidence                                                     1122222222221  11111111 122678999999999


Q ss_pred             cEEEEeecCCeEEEEEE
Q psy17610        497 KYFLTGGADQIVKICLY  513 (515)
Q Consensus       497 ~~l~s~~~dg~v~iw~~  513 (515)
                      ++||+.+.+|.|.+|++
T Consensus       488 ~yiaa~~t~g~I~v~nl  504 (691)
T KOG2048|consen  488 NYIAAISTRGQIFVYNL  504 (691)
T ss_pred             CEEEEEeccceEEEEEc
Confidence            99999999999999986

>KOG0275|consensus

Probab=100.00  E-value=2.8e-37  Score=250.45  Aligned_cols=283  Identities=22%  Similarity=0.315  Sum_probs=254.5

Q ss_pred             cCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEE--------EecCeEEEEEEEeeCCCEEEEEeCCCeEEEE
Q psy17610        122 CHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRI--------SVMNMICACIVFTYDGKAILSGWNDGFIRCF  193 (515)
Q Consensus       122 ~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~--------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~  193 (515)
                      +....+.|..|+|||++|++++.||-|.+||..+|+..+.+        .-+..+|.|+.|+.|...+++|+.||.|++|
T Consensus       211 g~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvW  290 (508)
T KOG0275|consen  211 GQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVW  290 (508)
T ss_pred             ccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEE
Confidence            45667899999999999999999999999999998865543        3467789999999999999999999999999


Q ss_pred             ecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeC
Q psy17610        194 TPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST  273 (515)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  273 (515)
                      .+++|.++..+.+.|...|+|+.|+.|+..+++++.|.++++.-+  ..++....+.+|++.|+...|.++|.++++++.
T Consensus       291 ri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGl--KSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSs  368 (508)
T KOG0275|consen  291 RIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGL--KSGKCLKEFRGHSSYVNEATFTDDGHHIISASS  368 (508)
T ss_pred             EEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEecc--ccchhHHHhcCccccccceEEcCCCCeEEEecC
Confidence            999999999998899999999999999999999999999999998  567788889999999999999999999999999


Q ss_pred             CCcEEEEEcccceEEEEEEcCc---cEEEEEEcCC-CcEEEEEECCCeEEEEeCCCCceEEEEecCC--CccEEEEEEcC
Q psy17610        274 DGTCVLWDLIKSTRLIIMILPS---MIMSAAYHPS-EVQLITCSTNKMIDYWETCDGSIIRSLEGSD--VAAVNCVDFVD  347 (515)
Q Consensus       274 d~~i~iwd~~~~~~~~~~~~~~---~~~~~~~~~~-~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~--~~~i~~~~~~~  347 (515)
                      ||+|++|+..+.+++..+...+   ++.++..-|. ...++++....++++.++ .|+.++.+....  .+..-+...+|
T Consensus       369 DgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~-qGQvVrsfsSGkREgGdFi~~~lSp  447 (508)
T KOG0275|consen  369 DGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNM-QGQVVRSFSSGKREGGDFINAILSP  447 (508)
T ss_pred             CccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEec-cceEEeeeccCCccCCceEEEEecC
Confidence            9999999999999988886554   6777777774 568888889999999987 567777776432  24566778999


Q ss_pred             CCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEe
Q psy17610        348 DGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWT  407 (515)
Q Consensus       348 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~  407 (515)
                      .|.++++.++|+.++.|...+|+.-.++.-|+..+-.++-+|..+.||+-+.||.+++|.
T Consensus       448 kGewiYcigED~vlYCF~~~sG~LE~tl~VhEkdvIGl~HHPHqNllAsYsEDgllKLWk  507 (508)
T KOG0275|consen  448 KGEWIYCIGEDGVLYCFSVLSGKLERTLPVHEKDVIGLTHHPHQNLLASYSEDGLLKLWK  507 (508)
T ss_pred             CCcEEEEEccCcEEEEEEeecCceeeeeecccccccccccCcccchhhhhcccchhhhcC
Confidence            999999999999999999999999999999999999999999999999999999999995

>KOG0313|consensus

Probab=100.00  E-value=3.4e-35  Score=243.10  Aligned_cols=281  Identities=21%  Similarity=0.315  Sum_probs=244.5

Q ss_pred             CccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCC---EEEEEeCCCeEEEEecCCCc
Q psy17610        123 HTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGK---AILSGWNDGFIRCFTPQSGK  199 (515)
Q Consensus       123 h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~l~~~~~dg~i~~~~~~~~~  199 (515)
                      |.+.|.++...  ++.+++++.||.+++||.. |+....+.+|.+++.+++|.....   .+++++.|.++++|..+.++
T Consensus       104 hdDWVSsv~~~--~~~IltgsYDg~~riWd~~-Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~  180 (423)
T KOG0313|consen  104 HDDWVSSVKGA--SKWILTGSYDGTSRIWDLK-GKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGE  180 (423)
T ss_pred             chhhhhhhccc--CceEEEeecCCeeEEEecC-CceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCch
Confidence            88889888887  4699999999999999975 889999999999999888855443   59999999999999988776


Q ss_pred             eEEEe---cCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccC-----------------------CceeeEEeecccc
Q psy17610        200 LKFII---PNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTR-----------------------ESQSLQCVLKEHT  253 (515)
Q Consensus       200 ~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~-----------------------~~~~~~~~~~~~~  253 (515)
                      .....   ..+|...|.+++..++|..+++|+.|.+|.+|+...                       ....++..+.+|.
T Consensus       181 ~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt  260 (423)
T KOG0313|consen  181 NKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHT  260 (423)
T ss_pred             hhhhHHhHhcccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccc
Confidence            43211   148999999999999999999999999999999321                       1124566788999


Q ss_pred             CceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCc---eEE
Q psy17610        254 SSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGS---IIR  330 (515)
Q Consensus       254 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~---~~~  330 (515)
                      .+|.++.|++ ...+++++.|.+|+.||+.++.....+..+....++.++|..+++++|+.|..+++||.+++.   ...
T Consensus       261 ~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~  339 (423)
T KOG0313|consen  261 EPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQ  339 (423)
T ss_pred             cceeeEEEcC-CCceEeecccceEEEEEeecccceeeeecCcceeEeecccccceeeecCCCCceeecCCCCCCCceeEE
Confidence            9999999987 678999999999999999999999999999999999999999999999999999999998763   345


Q ss_pred             EEecCCCccEEEEEEcCC-CCEEEEEcCCCeEEEEEccCCe-eeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeC
Q psy17610        331 SLEGSDVAAVNCVDFVDD-GKYFLTGGADQIVKMWMYREGV-PCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTF  408 (515)
Q Consensus       331 ~~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~  408 (515)
                      ++.+|. +.|..+.|+|. ...|++|+.|+++++||+++.+ ++..+.+|...|.++.|+ ++.++++|+.|.+++++.-
T Consensus       340 s~~gH~-nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~-~~~~IvSGGaD~~l~i~~~  417 (423)
T KOG0313|consen  340 SLIGHK-NWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWN-EGGLIVSGGADNKLRIFKG  417 (423)
T ss_pred             eeecch-hhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEEecc-CCceEEeccCcceEEEecc
Confidence            566665 79999999994 5568899999999999999887 999999999999999997 5668999999999999865


Q ss_pred             C
Q psy17610        409 P  409 (515)
Q Consensus       409 ~  409 (515)
                      .
T Consensus       418 ~  418 (423)
T KOG0313|consen  418 S  418 (423)
T ss_pred             c
Confidence            4

>KOG1408|consensus

Probab=100.00  E-value=6.1e-35  Score=260.72  Aligned_cols=383  Identities=17%  Similarity=0.254  Sum_probs=290.5

Q ss_pred             CCceEEEecCCCCeEEEEcCCCCCCcccccccceEEeeccccccccccccccccccCcceeeeccceEEEEEecCCCcEE
Q psy17610          6 NDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMGCYGKLIKKKVSTKLKDVNAEDVSLYSAGVTALYLLKDDSGIS   85 (515)
Q Consensus         6 ~~~~~~~g~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~   85 (515)
                      ..++++||+..|.|.+++.++-..+..+.-.   ...+.             ..-+..+.+....+.    ..+--..-.
T Consensus       269 s~r~I~cgCa~g~vrlFnp~tL~y~~Tlpr~---halg~-------------d~a~~~q~~~~~s~~----~~a~fPD~I  328 (1080)
T KOG1408|consen  269 SSRLIACGCAKGMVRLFNPETLDYAGTLPRS---HALGS-------------DTANLSQPEPKNSES----SPAIFPDAI  328 (1080)
T ss_pred             ecceEEEeeccceeeecCcchhhhccccccc---ccccc-------------chhhccccccccccc----CcccCCcee
Confidence            4568999999999999997765433332210   00110             000110000000000    000112345


Q ss_pred             EEEEecCCCEEEEEecCceEEEEECCCCceeEE--eeccCccCeEEEEeCCC-----------CcEEEEEecCCcEEEEe
Q psy17610         86 SLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTL--VNTCHTSAIYDLQFPVN-----------FSSVFATCSKNDIRIWS  152 (515)
Q Consensus        86 ~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~--~~~~h~~~v~~~~~~~~-----------~~~l~~~~~d~~i~iw~  152 (515)
                      ++.|+|....|.+...|..|+|||+..-.++.+  ..--|...|..+.--|-           ...++++++|++|++||
T Consensus       329 A~~Fdet~~klscVYndhSlYvWDvrD~~kvgk~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRlW~  408 (1080)
T KOG1408|consen  329 ACQFDETTDKLSCVYNDHSLYVWDVRDVNKVGKCSSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRLWD  408 (1080)
T ss_pred             EEEecCCCceEEEEEcCceEEEEeccccccccceeeeeeccceeeeeccccccccCcccccCCccceeEecCCCcEEEee
Confidence            788999999999999999999999986443322  12238888877765441           12578888899999999


Q ss_pred             CCCCceeEEE-------------------------------------EecCeEEEEEEEeeCCCEEEEEeCCCeEEEEec
Q psy17610        153 VRTLNELLRI-------------------------------------SVMNMICACIVFTYDGKAILSGWNDGFIRCFTP  195 (515)
Q Consensus       153 ~~~~~~~~~~-------------------------------------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~  195 (515)
                      ++.+..-..+                                     -.....+.+++.+|+|++|++|..-|.+++|++
T Consensus       409 l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~L  488 (1080)
T KOG1408|consen  409 LAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQHLASGDRGGNLRVYDL  488 (1080)
T ss_pred             cccccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCcceecccCccCceEEEEe
Confidence            9853211110                                     012345899999999999999999999999999


Q ss_pred             CCCceEEEecCCCCCCeEEEEEcC---CCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCC--CEEEE
Q psy17610        196 QSGKLKFIIPNAHNRGVTALAITQ---DGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDS--KEAMS  270 (515)
Q Consensus       196 ~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~  270 (515)
                      ...+....+ ..|...|.|+.|+.   ..++|++++.|..|.+||.. ....++.++.+|...|+++.|..+|  ..+++
T Consensus       489 q~l~~~~~~-eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~-rny~l~qtld~HSssITsvKFa~~gln~~Mis  566 (1080)
T KOG1408|consen  489 QELEYTCFM-EAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVK-RNYDLVQTLDGHSSSITSVKFACNGLNRKMIS  566 (1080)
T ss_pred             hhhhhhhhe-ecccceeEEEeecCchhhhHhhhhccCCceEEEEecc-cccchhhhhcccccceeEEEEeecCCceEEEe
Confidence            998887777 79999999999986   35789999999999999997 4567788899999999999998877  67899


Q ss_pred             EeCCCcEEEEEcccceEEEEE------EcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCC--ccEEE
Q psy17610        271 ASTDGTCVLWDLIKSTRLIIM------ILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDV--AAVNC  342 (515)
Q Consensus       271 ~~~d~~i~iwd~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~--~~i~~  342 (515)
                      ++.|..|.+--.+.......+      .....++.++..|..+++++++.|..|++||+++++..+.+++.+.  +..-.
T Consensus       567 cGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIK  646 (1080)
T KOG1408|consen  567 CGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIK  646 (1080)
T ss_pred             ccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEecccceEEEeccccceeeeecccccCCCceEE
Confidence            999987655433221111111      2234689999999999999999999999999999999999987542  45667


Q ss_pred             EEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCC
Q psy17610        343 VDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPE  410 (515)
Q Consensus       343 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~  410 (515)
                      +...|.|.|+++.+.|.++.++|+.+++++.+..+|...|+.+.|.+|.+.|++.+.||.|.+|.+..
T Consensus       647 v~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~GHsE~VTG~kF~nDCkHlISvsgDgCIFvW~lp~  714 (1080)
T KOG1408|consen  647 VILDPSGIYLATSCSDKTLCFVDFVSGECVAQMTGHSEAVTGVKFLNDCKHLISVSGDGCIFVWKLPL  714 (1080)
T ss_pred             EEECCCccEEEEeecCCceEEEEeccchhhhhhcCcchheeeeeecccchhheeecCCceEEEEECch
Confidence            88999999999999999999999999999999999999999999999999999999999999999863

>KOG0281|consensus

Probab=100.00  E-value=4.9e-37  Score=251.16  Aligned_cols=275  Identities=22%  Similarity=0.406  Sum_probs=239.8

Q ss_pred             CccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEE
Q psy17610        123 HTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKF  202 (515)
Q Consensus       123 h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~  202 (515)
                      ....|.|+.+..  ..++++..|++|+|||..+..+++.+.+|.+.|.|+.|.  .+.+++|+.|.+|++||.++++++.
T Consensus       196 ~skgVYClQYDD--~kiVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd--~rviisGSSDsTvrvWDv~tge~l~  271 (499)
T KOG0281|consen  196 NSKGVYCLQYDD--EKIVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQYD--ERVIVSGSSDSTVRVWDVNTGEPLN  271 (499)
T ss_pred             cCCceEEEEecc--hhhhcccccCceEEeccccHHHHHhhhcCCCcEEeeecc--ceEEEecCCCceEEEEeccCCchhh
Confidence            345799999863  488999999999999999999999999999999999884  5689999999999999999999999


Q ss_pred             EecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCc-eeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEE
Q psy17610        203 IIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRES-QSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWD  281 (515)
Q Consensus       203 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd  281 (515)
                      ++ ..|...|..+.|+  ..++++++.|.++.+||+.... ..+...+.+|...|..+.|+  .+++++++.|.+|++|+
T Consensus       272 tl-ihHceaVLhlrf~--ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd--~kyIVsASgDRTikvW~  346 (499)
T KOG0281|consen  272 TL-IHHCEAVLHLRFS--NGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWS  346 (499)
T ss_pred             HH-hhhcceeEEEEEe--CCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc--cceEEEecCCceEEEEe
Confidence            88 6899999999997  4489999999999999997543 33455678999999999984  56999999999999999


Q ss_pred             cccceEEEEEEcCc-cEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCe
Q psy17610        282 LIKSTRLIIMILPS-MIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQI  360 (515)
Q Consensus       282 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~  360 (515)
                      +.+.+.+..+..+. .|-++.+  .++.+++|+.|.+|++||+..|.+++.+++|. .-|.|+.|.  .+.+++|+.||+
T Consensus       347 ~st~efvRtl~gHkRGIAClQY--r~rlvVSGSSDntIRlwdi~~G~cLRvLeGHE-eLvRciRFd--~krIVSGaYDGk  421 (499)
T KOG0281|consen  347 TSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHE-ELVRCIRFD--NKRIVSGAYDGK  421 (499)
T ss_pred             ccceeeehhhhcccccceehhc--cCeEEEecCCCceEEEEeccccHHHHHHhchH-Hhhhheeec--Cceeeeccccce
Confidence            99999998887665 4555544  58899999999999999999999999999987 889999995  578999999999


Q ss_pred             EEEEEccCCe---------eeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcC
Q psy17610        361 VKMWMYREGV---------PCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELED  413 (515)
Q Consensus       361 i~i~d~~~~~---------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~  413 (515)
                      |++||+..+.         ++..+..|++.|..+.|  |...+++++.|.+|.+||+.....
T Consensus       422 ikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQF--D~fqIvsssHddtILiWdFl~~~~  481 (499)
T KOG0281|consen  422 IKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWDFLNGPP  481 (499)
T ss_pred             EEEEecccccCCcccccchHHHhhhhccceeEEEee--cceEEEeccCCCeEEEEEcCCCCc
Confidence            9999998753         34456789999999999  677899999999999999987653

>KOG0316|consensus

Probab=100.00  E-value=7.6e-35  Score=225.53  Aligned_cols=281  Identities=16%  Similarity=0.233  Sum_probs=242.6

Q ss_pred             EEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCC
Q psy17610         76 YLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRT  155 (515)
Q Consensus        76 ~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~  155 (515)
                      .+..|+++|.++.|+-+|+|.++++.|.+|++|+...| .+.+.+.+|...|..++.+.|...+++++.|+.+.+||+++
T Consensus        12 ~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg-~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~T   90 (307)
T KOG0316|consen   12 ILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRG-ALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNT   90 (307)
T ss_pred             eecccccceEEEEEccCCCEEEEcCCCceEEeeccccc-ceeeeecCCCceeeeccccccccccccCCCCceEEEEEccc
Confidence            35568999999999999999999999999999999986 56677889999999999999999999999999999999999


Q ss_pred             CceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCC--ceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcE
Q psy17610        156 LNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSG--KLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQV  233 (515)
Q Consensus       156 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i  233 (515)
                      |+.++++.+|.+.|..+.|+.+...+++|+.|.++++||-++.  ++++.+ ......|.++..+  +..+++|+.||++
T Consensus        91 Gkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQil-dea~D~V~Si~v~--~heIvaGS~DGtv  167 (307)
T KOG0316|consen   91 GKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQIL-DEAKDGVSSIDVA--EHEIVAGSVDGTV  167 (307)
T ss_pred             CeeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchh-hhhcCceeEEEec--ccEEEeeccCCcE
Confidence            9999999999999999999999999999999999999998765  456655 5667789998886  5579999999999


Q ss_pred             EEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCc---cEEEEEEcCCCcEEE
Q psy17610        234 RIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPS---MIMSAAYHPSEVQLI  310 (515)
Q Consensus       234 ~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~  310 (515)
                      +.||++.+  ....  .-...+|++++|+++++..+.++.|+++++.|-.+++.+..+..+.   .-..++++.....++
T Consensus       168 RtydiR~G--~l~s--Dy~g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~eykldc~l~qsdthV~  243 (307)
T KOG0316|consen  168 RTYDIRKG--TLSS--DYFGHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEYKLDCCLNQSDTHVF  243 (307)
T ss_pred             EEEEeecc--eeeh--hhcCCcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcccccceeeeeeeecccceeEE
Confidence            99999644  3332  2345689999999999999999999999999999999887776553   245677888889999


Q ss_pred             EEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEE
Q psy17610        311 TCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWM  365 (515)
Q Consensus       311 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d  365 (515)
                      +|++||.+++||+.....+..+..+..-.+..++++|.-..++++.. +.+..|.
T Consensus       244 sgSEDG~Vy~wdLvd~~~~sk~~~~~~v~v~dl~~hp~~~~f~~A~~-~~~~~~~  297 (307)
T KOG0316|consen  244 SGSEDGKVYFWDLVDETQISKLSVVSTVIVTDLSCHPTMDDFITATG-HGDLFWY  297 (307)
T ss_pred             eccCCceEEEEEeccceeeeeeccCCceeEEeeecccCccceeEecC-Cceecee
Confidence            99999999999999999999998887455899999997766666653 3455554

>KOG1407|consensus

Probab=100.00  E-value=4.5e-34  Score=224.73  Aligned_cols=277  Identities=18%  Similarity=0.193  Sum_probs=242.5

Q ss_pred             EEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCcee-EEeeccCccCeEEEEeCCCC-cEEEEEecCCcEEEEe
Q psy17610         75 LYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTL-TLVNTCHTSAIYDLQFPVNF-SSVFATCSKNDIRIWS  152 (515)
Q Consensus        75 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~-~~~~~~h~~~v~~~~~~~~~-~~l~~~~~d~~i~iw~  152 (515)
                      ..+.+|.+.|.+++|+.+|..||+|+.|+++.+|+++..... .....+|.+.|..++|+|.. ..+++++.|++|++||
T Consensus        14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd   93 (313)
T KOG1407|consen   14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWD   93 (313)
T ss_pred             HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEE
Confidence            345679999999999999999999999999999999875322 23566899999999998754 5777788899999999


Q ss_pred             CCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCc
Q psy17610        153 VRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQ  232 (515)
Q Consensus       153 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~  232 (515)
                      ++++++...+....+.+ .+.|+|+|++++++..|..|...|.++.+.....  .....++.++|+.++++++.-...|.
T Consensus        94 ~r~~k~~~~i~~~~eni-~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~--~~~~e~ne~~w~~~nd~Fflt~GlG~  170 (313)
T KOG1407|consen   94 IRSGKCTARIETKGENI-NITWSPDGEYIAVGNKDDRITFIDARTYKIVNEE--QFKFEVNEISWNNSNDLFFLTNGLGC  170 (313)
T ss_pred             eccCcEEEEeeccCcce-EEEEcCCCCEEEEecCcccEEEEEecccceeehh--cccceeeeeeecCCCCEEEEecCCce
Confidence            99999999888666555 4789999999999999999999999988877664  45566888999988888887777899


Q ss_pred             EEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEE-cCccEEEEEEcCCCcEEEE
Q psy17610        233 VRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMI-LPSMIMSAAYHPSEVQLIT  311 (515)
Q Consensus       233 i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~  311 (515)
                      |.|...  ...+++..+..|.....|+.|+|+|++|++|+.|..+.+||+...-+.+.+. +.-+|..+.|+.+|++|++
T Consensus       171 v~ILsy--psLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lAS  248 (313)
T KOG1407|consen  171 VEILSY--PSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISRLDWPVRTLSFSHDGRMLAS  248 (313)
T ss_pred             EEEEec--cccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheeeccccCceEEEEeccCcceeec
Confidence            999998  5788899999999999999999999999999999999999999888887775 4558999999999999999


Q ss_pred             EECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCC
Q psy17610        312 CSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGAD  358 (515)
Q Consensus       312 ~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d  358 (515)
                      +++|..|-|=+.++|..+.+++..  ++...++|+|...+||.++.|
T Consensus       249 aSEDh~IDIA~vetGd~~~eI~~~--~~t~tVAWHPk~~LLAyA~dd  293 (313)
T KOG1407|consen  249 ASEDHFIDIAEVETGDRVWEIPCE--GPTFTVAWHPKRPLLAYACDD  293 (313)
T ss_pred             cCccceEEeEecccCCeEEEeecc--CCceeEEecCCCceeeEEecC
Confidence            999999999999999999998865  788999999999999987765

>KOG0275|consensus

Probab=100.00  E-value=7.3e-36  Score=242.25  Aligned_cols=285  Identities=16%  Similarity=0.252  Sum_probs=247.1

Q ss_pred             EEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeE-------EeeccCccCeEEEEeCCCCcEEEEEecCCcE
Q psy17610         76 YLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLT-------LVNTCHTSAIYDLQFPVNFSSVFATCSKNDI  148 (515)
Q Consensus        76 ~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~-------~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i  148 (515)
                      .-.+..+-+-|..|||||+||++|+.||.|.+||..+|+...       ..+.-+..+|.|+.|+.|...+++++.||.|
T Consensus       208 IKFg~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkI  287 (508)
T KOG0275|consen  208 IKFGQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKI  287 (508)
T ss_pred             eecccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcE
Confidence            344567789999999999999999999999999999874321       1223478899999999999999999999999


Q ss_pred             EEEeCCCCceeEEEE-ecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEe
Q psy17610        149 RIWSVRTLNELLRIS-VMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSG  227 (515)
Q Consensus       149 ~iw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  227 (515)
                      ++|.+++|.+++++. .|...|+|+.|+.|+..+++++.|.++++.-+.+|+++..+ ++|...|+...|+++|..++++
T Consensus       288 KvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEf-rGHsSyvn~a~ft~dG~~iisa  366 (508)
T KOG0275|consen  288 KVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEF-RGHSSYVNEATFTDDGHHIISA  366 (508)
T ss_pred             EEEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHh-cCccccccceEEcCCCCeEEEe
Confidence            999999999999998 89999999999999999999999999999999999999998 7999999999999999999999


Q ss_pred             cCCCcEEEEEccCCceeeEEeec--cccCceEEEEEec-CCCEEEEEeCCCcEEEEEcccceEEEEEEcC----ccEEEE
Q psy17610        228 GGEGQVRIWKLTRESQSLQCVLK--EHTSSVSVIQIKS-DSKEAMSASTDGTCVLWDLIKSTRLIIMILP----SMIMSA  300 (515)
Q Consensus       228 ~~d~~i~iw~~~~~~~~~~~~~~--~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~----~~~~~~  300 (515)
                      +.||+|++|+..  +..+..+++  +...+|..+..-| +...++.+....++.+.++ .++.++.+...    +...++
T Consensus       367 SsDgtvkvW~~K--tteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~-qGQvVrsfsSGkREgGdFi~~  443 (508)
T KOG0275|consen  367 SSDGTVKVWHGK--TTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNM-QGQVVRSFSSGKREGGDFINA  443 (508)
T ss_pred             cCCccEEEecCc--chhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEec-cceEEeeeccCCccCCceEEE
Confidence            999999999985  334444433  3455677776655 4567888999999999998 46666666543    457888


Q ss_pred             EEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEE
Q psy17610        301 AYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWM  365 (515)
Q Consensus       301 ~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d  365 (515)
                      +.+|.|.++++.++|+.++.|...+|+..+.+..+. ..+-.++-+|..+.+|+-++||.+++|.
T Consensus       444 ~lSpkGewiYcigED~vlYCF~~~sG~LE~tl~VhE-kdvIGl~HHPHqNllAsYsEDgllKLWk  507 (508)
T KOG0275|consen  444 ILSPKGEWIYCIGEDGVLYCFSVLSGKLERTLPVHE-KDVIGLTHHPHQNLLASYSEDGLLKLWK  507 (508)
T ss_pred             EecCCCcEEEEEccCcEEEEEEeecCceeeeeeccc-ccccccccCcccchhhhhcccchhhhcC
Confidence            999999999999999999999999999999999887 6677899999999999999999999994

>KOG0281|consensus

Probab=100.00  E-value=1.7e-35  Score=242.22  Aligned_cols=283  Identities=21%  Similarity=0.411  Sum_probs=235.3

Q ss_pred             cCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCcee
Q psy17610        165 MNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQS  244 (515)
Q Consensus       165 ~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~  244 (515)
                      ....|.|+.+  |...+++|..|.+|++||..+..+...+ .+|.+.|.|+.|.  .+.+++|+.|.+|++||.  ++++
T Consensus       196 ~skgVYClQY--DD~kiVSGlrDnTikiWD~n~~~c~~~L-~GHtGSVLCLqyd--~rviisGSSDsTvrvWDv--~tge  268 (499)
T KOG0281|consen  196 NSKGVYCLQY--DDEKIVSGLRDNTIKIWDKNSLECLKIL-TGHTGSVLCLQYD--ERVIVSGSSDSTVRVWDV--NTGE  268 (499)
T ss_pred             cCCceEEEEe--cchhhhcccccCceEEeccccHHHHHhh-hcCCCcEEeeecc--ceEEEecCCCceEEEEec--cCCc
Confidence            3456888887  4557999999999999999998888877 7999999999995  559999999999999999  5677


Q ss_pred             eEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEE----EEcCccEEEEEEcCCCcEEEEEECCCeEEE
Q psy17610        245 LQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLII----MILPSMIMSAAYHPSEVQLITCSTNKMIDY  320 (515)
Q Consensus       245 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~  320 (515)
                      ++.++.+|...|..+.|+  +.++++++.|.++.+||+.....+..    ..+...+..+.|+  .+++++++.|.+|++
T Consensus       269 ~l~tlihHceaVLhlrf~--ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd--~kyIVsASgDRTikv  344 (499)
T KOG0281|consen  269 PLNTLIHHCEAVLHLRFS--NGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKV  344 (499)
T ss_pred             hhhHHhhhcceeEEEEEe--CCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc--cceEEEecCCceEEE
Confidence            888899999999999995  46899999999999999977652211    1233456666665  559999999999999


Q ss_pred             EeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCC
Q psy17610        321 WETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSAD  400 (515)
Q Consensus       321 ~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d  400 (515)
                      |++.+++.++++.+|. ..|.|+.+  .++++++|+.|.+|++||++.|.++..+++|+.-|.++.|  |.+.+++|+.|
T Consensus       345 W~~st~efvRtl~gHk-RGIAClQY--r~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRciRF--d~krIVSGaYD  419 (499)
T KOG0281|consen  345 WSTSTCEFVRTLNGHK-RGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYD  419 (499)
T ss_pred             Eeccceeeehhhhccc-ccceehhc--cCeEEEecCCCceEEEEeccccHHHHHHhchHHhhhheee--cCceeeecccc
Confidence            9999999999999987 77878777  5889999999999999999999999999999999999999  66789999999


Q ss_pred             CcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeee
Q psy17610        401 GGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSII  476 (515)
Q Consensus       401 g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~  476 (515)
                      |+|++||+............+           .......|.+.|..+.|  |...+++++.|.+|.+||..++-+-
T Consensus       420 GkikvWdl~aaldpra~~~~~-----------Cl~~lv~hsgRVFrLQF--D~fqIvsssHddtILiWdFl~~~~~  482 (499)
T KOG0281|consen  420 GKIKVWDLQAALDPRAPASTL-----------CLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWDFLNGPPS  482 (499)
T ss_pred             ceEEEEecccccCCcccccch-----------HHHhhhhccceeEEEee--cceEEEeccCCCeEEEEEcCCCCcc
Confidence            999999998876433222221           12223456678999998  5678899999999999998776543

>KOG0640|consensus

Probab=100.00  E-value=8e-34  Score=228.89  Aligned_cols=295  Identities=16%  Similarity=0.243  Sum_probs=246.5

Q ss_pred             ceEEEEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCC-----------------CceeEEeeccCccCeEEEEeC
Q psy17610         71 GVTALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNS-----------------GFTLTLVNTCHTSAIYDLQFP  133 (515)
Q Consensus        71 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~-----------------~~~~~~~~~~h~~~v~~~~~~  133 (515)
                      ..+...+..|.+++.+-+|||||.++|+|+.|..|+|.|++.                 +..+.+.+-.|.++|+++.|+
T Consensus       102 ~yEt~ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FH  181 (430)
T KOG0640|consen  102 EYETKYLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFH  181 (430)
T ss_pred             ccceEEEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeec
Confidence            356677889999999999999999999999999999999861                 113445666799999999999


Q ss_pred             CCCcEEEEEecCCcEEEEeCCCCceeEEEE--ecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEe--cCCCC
Q psy17610        134 VNFSSVFATCSKNDIRIWSVRTLNELLRIS--VMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFII--PNAHN  209 (515)
Q Consensus       134 ~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~--~~~~~  209 (515)
                      |....|++++.|++|+++|.......+.++  ....+|.++.|+|.|.+|++|.....+++||+++-++...-  ...|.
T Consensus       182 Pre~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht  261 (430)
T KOG0640|consen  182 PRETILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHT  261 (430)
T ss_pred             chhheEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCcccccc
Confidence            999999999999999999997543322222  34568999999999999999999999999999998875432  25689


Q ss_pred             CCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEee-cccc-CceEEEEEecCCCEEEEEeCCCcEEEEEcccceE
Q psy17610        210 RGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVL-KEHT-SSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTR  287 (515)
Q Consensus       210 ~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~-~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~  287 (515)
                      +.|+++.+++.+++.++++.||.|++||--  ...++.++ ..|. ..|.+..|..+++++++.+.|..+++|.+.++++
T Consensus       262 ~ai~~V~Ys~t~~lYvTaSkDG~IklwDGV--S~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~  339 (430)
T KOG0640|consen  262 GAITQVRYSSTGSLYVTASKDGAIKLWDGV--SNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRM  339 (430)
T ss_pred             cceeEEEecCCccEEEEeccCCcEEeeccc--cHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCCce
Confidence            999999999999999999999999999963  33344333 3443 5688999999999999999999999999999999


Q ss_pred             EEEEEcCc------cEEEEEEcCCCcEEEEEEC-CCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCe
Q psy17610        288 LIIMILPS------MIMSAAYHPSEVQLITCST-NKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQI  360 (515)
Q Consensus       288 ~~~~~~~~------~~~~~~~~~~~~~l~~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~  360 (515)
                      +..+...+      .-+...|+....+++.-.+ .+.+.-||.++...+..+...|.+.++.+.-+|.+.-+.+++.|-.
T Consensus       340 l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~slgHn~a~R~i~HSP~~p~FmTcsdD~r  419 (430)
T KOG0640|consen  340 LKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLSLGHNGAVRWIVHSPVEPAFMTCSDDFR  419 (430)
T ss_pred             EEEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhhhhcccCCCCCceEEEeCCCCCceeeecccce
Confidence            99886653      1345667777777776654 5679999999999998888888899999999999999999999999


Q ss_pred             EEEEEcc
Q psy17610        361 VKMWMYR  367 (515)
Q Consensus       361 i~i~d~~  367 (515)
                      +++|--+
T Consensus       420 aRFWyrr  426 (430)
T KOG0640|consen  420 ARFWYRR  426 (430)
T ss_pred             eeeeeec
Confidence            9999653

>KOG1446|consensus

Probab=100.00  E-value=5.5e-32  Score=219.54  Aligned_cols=282  Identities=16%  Similarity=0.213  Sum_probs=240.2

Q ss_pred             CCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec--CCcEEEEeCCCCc
Q psy17610         80 DDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS--KNDIRIWSVRTLN  157 (515)
Q Consensus        80 ~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~--d~~i~iw~~~~~~  157 (515)
                      ..+.|+++.|+++|.+|++++.|..+++||..++.++..+.. ++-.+..++|......++.++.  |.+|+..++.+.+
T Consensus        13 ~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~s-kkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~dNk   91 (311)
T KOG1446|consen   13 TNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINS-KKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHDNK   91 (311)
T ss_pred             CCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeec-ccccccEEEEecCCceEEEccCCCCCceEEEEeecCc
Confidence            578999999999999999999999999999999877766654 5556888899666667777776  8999999999999


Q ss_pred             eeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEE
Q psy17610        158 ELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWK  237 (515)
Q Consensus       158 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~  237 (515)
                      .++-+.+|...|..++.+|-++.+++++.|++|++||++..++...+.   ...-..++|.|+|-++|++.....|++||
T Consensus        92 ylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~---~~~~pi~AfDp~GLifA~~~~~~~IkLyD  168 (311)
T KOG1446|consen   92 YLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLN---LSGRPIAAFDPEGLIFALANGSELIKLYD  168 (311)
T ss_pred             eEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEe---cCCCcceeECCCCcEEEEecCCCeEEEEE
Confidence            999999999999999999999999999999999999999888877663   22334679999999999998888999999


Q ss_pred             ccCCceeeEEeec---cccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCcc----EEEEEEcCCCcEEE
Q psy17610        238 LTRESQSLQCVLK---EHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSM----IMSAAYHPSEVQLI  310 (515)
Q Consensus       238 ~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~  310 (515)
                      ++.-...+...+.   +.....+.+.|+|||++++.+...+.+.+.|.-+|.....+.....    ....+|.||+++++
T Consensus       169 ~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~Fvl  248 (311)
T KOG1446|consen  169 LRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSKFVL  248 (311)
T ss_pred             ecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCCcEEE
Confidence            9765433333332   3466789999999999999999999999999999998887765532    35888999999999


Q ss_pred             EEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEcc
Q psy17610        311 TCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYR  367 (515)
Q Consensus       311 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~  367 (515)
                      +++.||+|.+|+++++..+..+.+....++.|+.|+|.-.++++++  ..+.+|=..
T Consensus       249 ~gs~dg~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~~~mf~sa~--s~l~fw~p~  303 (311)
T KOG1446|consen  249 SGSDDGTIHVWNLETGKKVAVLRGPNGGPVSCVRFNPRYAMFVSAS--SNLVFWLPD  303 (311)
T ss_pred             EecCCCcEEEEEcCCCcEeeEecCCCCCCccccccCCceeeeeecC--ceEEEEecc
Confidence            9999999999999999999999997778999999999877777665  467777554

>KOG0313|consensus

Probab=100.00  E-value=4.6e-33  Score=230.52  Aligned_cols=308  Identities=21%  Similarity=0.260  Sum_probs=243.0

Q ss_pred             cCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCC---CEEEEecCCCcEEEEEccCC
Q psy17610        165 MNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDG---TRLLSGGGEGQVRIWKLTRE  241 (515)
Q Consensus       165 ~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~d~~i~iw~~~~~  241 (515)
                      |.+.|.++...  ++++++|+.||.+++||.. |+....+ .+|.++|.+++|....   ..|++++.|.++++|..+.+
T Consensus       104 hdDWVSsv~~~--~~~IltgsYDg~~riWd~~-Gk~~~~~-~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~  179 (423)
T KOG0313|consen  104 HDDWVSSVKGA--SKWILTGSYDGTSRIWDLK-GKSIKTI-VGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVG  179 (423)
T ss_pred             chhhhhhhccc--CceEEEeecCCeeEEEecC-CceEEEE-ecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCc
Confidence            66777777766  6799999999999999965 6666666 6999999988885433   35999999999999998654


Q ss_pred             cee--eEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEE
Q psy17610        242 SQS--LQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMID  319 (515)
Q Consensus       242 ~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~  319 (515)
                      ...  ......||...|.++...+++..+++++.|.++.+|+..+... ..++....      -+..+         .-+
T Consensus       180 ~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~-~~~E~~s~------~rrk~---------~~~  243 (423)
T KOG0313|consen  180 ENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEE-DELESSSN------RRRKK---------QKR  243 (423)
T ss_pred             hhhhhHHhHhcccccceeEEEecCCCCeEEeecccceeeecccCCCcc-ccccccch------hhhhh---------hhh
Confidence            432  2333459999999999999999999999999999999432211 11110000      00000         000


Q ss_pred             EEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeC
Q psy17610        320 YWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSA  399 (515)
Q Consensus       320 ~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~  399 (515)
                      -=...++.++..+.+|. .+|.++.|++ ...+++++.|.+|+.||+.++....++.+ ...+.++..+|..++|++|+.
T Consensus       244 ~~~~~~r~P~vtl~GHt-~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~~~~~~~-~ksl~~i~~~~~~~Ll~~gss  320 (423)
T KOG0313|consen  244 EKEGGTRTPLVTLEGHT-EPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGLKSTLTT-NKSLNCISYSPLSKLLASGSS  320 (423)
T ss_pred             hhcccccCceEEecccc-cceeeEEEcC-CCceEeecccceEEEEEeecccceeeeec-CcceeEeecccccceeeecCC
Confidence            00123456777788877 9999999998 66799999999999999999988877654 467899999999999999999


Q ss_pred             CCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCc-EEEEeecCCeEEEEecCCCe-eee
Q psy17610        400 DGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEV-QLITCSTNKMIDYWETCDGS-IIR  477 (515)
Q Consensus       400 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~v~iwd~~~~~-~~~  477 (515)
                      |..+++||.+....                 ......+.+|.+.|.++.|+|... +|++++.|+++++||+++.+ ++.
T Consensus       321 dr~irl~DPR~~~g-----------------s~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~ply  383 (423)
T KOG0313|consen  321 DRHIRLWDPRTGDG-----------------SVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLY  383 (423)
T ss_pred             CCceeecCCCCCCC-----------------ceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcce
Confidence            99999999877532                 233455678999999999999765 67899999999999999988 899


Q ss_pred             eecccccceEEEEEEcCCCcEEEEeecCCeEEEEEEe
Q psy17610        478 SLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLYI  514 (515)
Q Consensus       478 ~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~  514 (515)
                      .+.+|. ..|.++.|. ++.++++||.|.+|+|+...
T Consensus       384 dI~~h~-DKvl~vdW~-~~~~IvSGGaD~~l~i~~~~  418 (423)
T KOG0313|consen  384 DIAGHN-DKVLSVDWN-EGGLIVSGGADNKLRIFKGS  418 (423)
T ss_pred             eeccCC-ceEEEEecc-CCceEEeccCcceEEEeccc
Confidence            999997 999999998 56689999999999998754

>KOG1446|consensus

Probab=100.00  E-value=1e-31  Score=218.01  Aligned_cols=286  Identities=17%  Similarity=0.285  Sum_probs=241.1

Q ss_pred             EEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeC--CCeEEEEe
Q psy17610        117 TLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWN--DGFIRCFT  194 (515)
Q Consensus       117 ~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~~~~  194 (515)
                      .+.+..-.+.|+++.|+++|..+++++.|.+++|||..++++++++..++-.+..++|......++.++.  |.+|+..+
T Consensus         7 ak~f~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLs   86 (311)
T KOG1446|consen    7 AKVFRETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLS   86 (311)
T ss_pred             ccccccCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEE
Confidence            3444446778999999999999999999999999999999999999988888999999888887887776  88999999


Q ss_pred             cCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCC
Q psy17610        195 PQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTD  274 (515)
Q Consensus       195 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  274 (515)
                      +.+.+.++.+ .+|...|++++.+|-+..+++++.|++|++||++..+  +...+..  ..-..++|+|+|-.++++...
T Consensus        87 l~dNkylRYF-~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~--cqg~l~~--~~~pi~AfDp~GLifA~~~~~  161 (311)
T KOG1446|consen   87 LHDNKYLRYF-PGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKK--CQGLLNL--SGRPIAAFDPEGLIFALANGS  161 (311)
T ss_pred             eecCceEEEc-CCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCC--CceEEec--CCCcceeECCCCcEEEEecCC
Confidence            9999999988 7999999999999988999999999999999997433  3322322  223457899999999999988


Q ss_pred             CcEEEEEcccc--eEEEEEEc----CccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCcc--EEEEEEc
Q psy17610        275 GTCVLWDLIKS--TRLIIMIL----PSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAA--VNCVDFV  346 (515)
Q Consensus       275 ~~i~iwd~~~~--~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~--i~~~~~~  346 (515)
                      ..|++||++..  .+...+..    ..+...+.|+|+|++++.++..+.+++.|.-+|..+.++..+....  .....|+
T Consensus       162 ~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ft  241 (311)
T KOG1446|consen  162 ELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFT  241 (311)
T ss_pred             CeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEEC
Confidence            89999999864  23333332    3468999999999999999999999999999999998887654322  2467899


Q ss_pred             CCCCEEEEEcCCCeEEEEEccCCeeeeeccC-CCCCeeEEEECCCCcEEEEEeCCCcEEEEeCC
Q psy17610        347 DDGKYFLTGGADQIVKMWMYREGVPCFVGIG-HAASITKIKISPDKKVIVSVSADGGIFLWTFP  409 (515)
Q Consensus       347 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~  409 (515)
                      ||++++++|+.||+|.+|+++++..+..+.+ +..++.++.|+|.-.+++++  +..+.+|=..
T Consensus       242 Pds~Fvl~gs~dg~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~~~mf~sa--~s~l~fw~p~  303 (311)
T KOG1446|consen  242 PDSKFVLSGSDDGTIHVWNLETGKKVAVLRGPNGGPVSCVRFNPRYAMFVSA--SSNLVFWLPD  303 (311)
T ss_pred             CCCcEEEEecCCCcEEEEEcCCCcEeeEecCCCCCCccccccCCceeeeeec--CceEEEEecc
Confidence            9999999999999999999999999999888 78999999999987766665  4578888544

>KOG0274|consensus

Probab=100.00  E-value=2.2e-32  Score=253.48  Aligned_cols=288  Identities=20%  Similarity=0.355  Sum_probs=255.1

Q ss_pred             cCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCce
Q psy17610         79 KDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNE  158 (515)
Q Consensus        79 ~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~  158 (515)
                      .+...+.+..|.  +.++++++.+++|++||..++..+...+.||.+.|.++++..-+..+++++.|.++++||..+|++
T Consensus       206 ~~~~~~~~~q~~--~~~~~~~s~~~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C  283 (537)
T KOG0274|consen  206 TDDHVVLCLQLH--DGFFKSGSDDSTLHLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGEC  283 (537)
T ss_pred             cCcchhhhheee--cCeEEecCCCceeEEeecccceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcE
Confidence            367889999998  668999999999999999998777777999999999999987677999999999999999999999


Q ss_pred             eEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEc
Q psy17610        159 LLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKL  238 (515)
Q Consensus       159 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~  238 (515)
                      ...+.+|...+.++...  ...+++|+.|.+|++|+++++..+..+ .+|..+|.++..+  +.++++|+.|+.|++||+
T Consensus       284 ~~~l~gh~stv~~~~~~--~~~~~sgs~D~tVkVW~v~n~~~l~l~-~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~  358 (537)
T KOG0274|consen  284 THSLQGHTSSVRCLTID--PFLLVSGSRDNTVKVWDVTNGACLNLL-RGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDP  358 (537)
T ss_pred             EEEecCCCceEEEEEcc--CceEeeccCCceEEEEeccCcceEEEe-ccccccEEEEEec--CCEEEEEecCceEEEEEh
Confidence            99999999999888764  457888999999999999999999988 5699999999998  779999999999999999


Q ss_pred             cCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccc-eEEEEEEcCccEEEEEEcCCCcEEEEEECCCe
Q psy17610        239 TRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKS-TRLIIMILPSMIMSAAYHPSEVQLITCSTNKM  317 (515)
Q Consensus       239 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  317 (515)
                      .  ..+++..+.+|...|.++.+.+. ..+++|+.|++|++||+++. +++..+..+..+. ......++.+++++.|+.
T Consensus       359 ~--~~~cl~sl~gH~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v-~~l~~~~~~Lvs~~aD~~  434 (537)
T KOG0274|consen  359 R--TGKCLKSLSGHTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSLV-SSLLLRDNFLVSSSADGT  434 (537)
T ss_pred             h--hceeeeeecCCcceEEEEEecCc-ceEEeeeeccceEeecCCchhhhhhhhcCCcccc-cccccccceeEecccccc
Confidence            5  78899999999999999987655 89999999999999999999 8888887776554 444567889999999999


Q ss_pred             EEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCC
Q psy17610        318 IDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHA  379 (515)
Q Consensus       318 i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~  379 (515)
                      |++||..++++++.+...+...+..+++.  ...+++++.||.+++||++++++...+..+.
T Consensus       435 Ik~WD~~~~~~~~~~~~~~~~~v~~l~~~--~~~il~s~~~~~~~l~dl~~~~~~~~l~~~~  494 (537)
T KOG0274|consen  435 IKLWDAEEGECLRTLEGRHVGGVSALALG--KEEILCSSDDGSVKLWDLRSGTLIRTLLSTD  494 (537)
T ss_pred             EEEeecccCceeeeeccCCcccEEEeecC--cceEEEEecCCeeEEEecccCchhhhhhhcc
Confidence            99999999999999998544788888876  4578889999999999999998887664443

>KOG0310|consensus

Probab=100.00  E-value=1.1e-32  Score=235.97  Aligned_cols=282  Identities=21%  Similarity=0.296  Sum_probs=242.6

Q ss_pred             CccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEE
Q psy17610        123 HTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKF  202 (515)
Q Consensus       123 h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~  202 (515)
                      ..+.|.+++|+|..++=++....-.+.||+..+....+.+......+.++.|-.||++|++|...|.|++||..+...+.
T Consensus        25 e~~~vssl~fsp~~P~d~aVt~S~rvqly~~~~~~~~k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~iLR  104 (487)
T KOG0310|consen   25 EHNSVSSLCFSPKHPYDFAVTSSVRVQLYSSVTRSVRKTFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSRVILR  104 (487)
T ss_pred             ccCcceeEecCCCCCCceEEecccEEEEEecchhhhhhhHHhhccceeEEEeecCCeEEEccCCcCcEEEeccccHHHHH
Confidence            34679999999988777777777889999999888888788888899999999999999999999999999976655555


Q ss_pred             EecCCCCCCeEEEEEcC-CCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCC-EEEEEeCCCcEEEE
Q psy17610        203 IIPNAHNRGVTALAITQ-DGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSK-EAMSASTDGTCVLW  280 (515)
Q Consensus       203 ~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iw  280 (515)
                      .+ .+|+.++..+.|+| ++..+++|+.|+.+++||+.+.  ..+..+.+|++.|.+.+++|... .+++|+.||.|++|
T Consensus       105 ~~-~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a--~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~  181 (487)
T KOG0310|consen  105 QL-YAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTA--YVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLW  181 (487)
T ss_pred             HH-hhccCceeEEEecccCCeEEEecCCCceEEEEEcCCc--EEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEE
Confidence            55 79999999999999 5567788999999999999643  34668899999999999999655 78899999999999


Q ss_pred             Ecccc-eEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCC
Q psy17610        281 DLIKS-TRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQ  359 (515)
Q Consensus       281 d~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg  359 (515)
                      |.+.. ..+..+.+..+|..+.+-|.|..+++++. ..+++||+.+|.........|...|+|+.+..++..|++|+-|+
T Consensus       182 DtR~~~~~v~elnhg~pVe~vl~lpsgs~iasAgG-n~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~  260 (487)
T KOG0310|consen  182 DTRSLTSRVVELNHGCPVESVLALPSGSLIASAGG-NSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDR  260 (487)
T ss_pred             EeccCCceeEEecCCCceeeEEEcCCCCEEEEcCC-CeEEEEEecCCceehhhhhcccceEEEEEeecCCceEeeccccc
Confidence            99987 78888999999999999999999988754 57999999966555444442338999999999999999999999


Q ss_pred             eEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCC
Q psy17610        360 IVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFP  409 (515)
Q Consensus       360 ~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~  409 (515)
                      .+++||+.+.+.+..+ .-.++|.+++.+|+++.++.|-.+|.+.+-+..
T Consensus       261 ~VKVfd~t~~Kvv~s~-~~~~pvLsiavs~dd~t~viGmsnGlv~~rr~~  309 (487)
T KOG0310|consen  261 HVKVFDTTNYKVVHSW-KYPGPVLSIAVSPDDQTVVIGMSNGLVSIRRRE  309 (487)
T ss_pred             ceEEEEccceEEEEee-ecccceeeEEecCCCceEEEecccceeeeehhh
Confidence            9999998877777766 567899999999999999999999988776443

>KOG0305|consensus

Probab=100.00  E-value=2.9e-32  Score=242.70  Aligned_cols=278  Identities=19%  Similarity=0.290  Sum_probs=243.5

Q ss_pred             EEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEE
Q psy17610         84 ISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRIS  163 (515)
Q Consensus        84 v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~  163 (515)
                      .+-+.|+ ..+.||+|... .|++|+..++.... ...-+...|+++.|+++|.+|+++..+|.|.|||..+.+.+..+.
T Consensus       180 ~nlldWs-s~n~laValg~-~vylW~~~s~~v~~-l~~~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~  256 (484)
T KOG0305|consen  180 LNLLDWS-SANVLAVALGQ-SVYLWSASSGSVTE-LCSFGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLR  256 (484)
T ss_pred             hhHhhcc-cCCeEEEEecc-eEEEEecCCCceEE-eEecCCCceEEEEECCCCCEEEEeecCCeEEEEehhhcccccccc
Confidence            3456778 45577877654 79999999975333 333348899999999999999999999999999999999999999


Q ss_pred             e-cCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCc
Q psy17610        164 V-MNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRES  242 (515)
Q Consensus       164 ~-~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~  242 (515)
                      + |...|.+++|.  +..+.+|+.++.|..+|++..+.......+|...|..+.|++++.++|+|+.|+.+.|||.  ..
T Consensus       257 ~~h~~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~--~~  332 (484)
T KOG0305|consen  257 GSHASRVGSLAWN--SSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDG--LS  332 (484)
T ss_pred             CCcCceeEEEecc--CceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccC--CC
Confidence            8 99999999997  6679999999999999999887765544789999999999999999999999999999999  45


Q ss_pred             eeeEEeeccccCceEEEEEecC-CCEEEEEe--CCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEE--ECCCe
Q psy17610        243 QSLQCVLKEHTSSVSVIQIKSD-SKEAMSAS--TDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITC--STNKM  317 (515)
Q Consensus       243 ~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~  317 (515)
                      ..+...+..|...|..++|+|- ...|++|+  .|+.|++||..++..+........|.++.|++..+.++++  ..+..
T Consensus       333 ~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdtgsQVcsL~Wsk~~kEi~sthG~s~n~  412 (484)
T KOG0305|consen  333 PEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDTGSQVCSLIWSKKYKELLSTHGYSENQ  412 (484)
T ss_pred             ccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEecccccCCceeeEEEcCCCCEEEEecCCCCCc
Confidence            5667778899999999999994 55677754  5899999999999999999999999999999999877764  45778


Q ss_pred             EEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCC
Q psy17610        318 IDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREG  369 (515)
Q Consensus       318 i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~  369 (515)
                      |.+|+..+.+.+..+.+|. ..|..++++|||..+++|+.|.++++|++-..
T Consensus       413 i~lw~~ps~~~~~~l~gH~-~RVl~la~SPdg~~i~t~a~DETlrfw~~f~~  463 (484)
T KOG0305|consen  413 ITLWKYPSMKLVAELLGHT-SRVLYLALSPDGETIVTGAADETLRFWNLFDE  463 (484)
T ss_pred             EEEEeccccceeeeecCCc-ceeEEEEECCCCCEEEEecccCcEEeccccCC
Confidence            9999999999999999987 88999999999999999999999999998664

>KOG0289|consensus

Probab=100.00  E-value=3e-32  Score=229.62  Aligned_cols=282  Identities=22%  Similarity=0.316  Sum_probs=250.1

Q ss_pred             CCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeE
Q psy17610         81 DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELL  160 (515)
Q Consensus        81 ~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~  160 (515)
                      ...++++...|..+.+++|+.|..+.++|..+ .++..+++||...|+.+.|+|+...+++++.|..|+||.........
T Consensus       219 ~pgi~ald~~~s~~~ilTGG~d~~av~~d~~s-~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~~~  297 (506)
T KOG0289|consen  219 TPGITALDIIPSSSKILTGGEDKTAVLFDKPS-NQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSEPT  297 (506)
T ss_pred             CCCeeEEeecCCCCcceecCCCCceEEEecch-hhhhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccccCcc
Confidence            36789999998888999999999999999998 57788899999999999999999999999999999999999888888


Q ss_pred             EEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecC-CCCCCeEEEEEcCCCCEEEEecCCCcEEEEEcc
Q psy17610        161 RISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPN-AHNRGVTALAITQDGTRLLSGGGEGQVRIWKLT  239 (515)
Q Consensus       161 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~  239 (515)
                      ....|..+|+.+..+|.|.||++++.|+...+.|++++..+..... ...-.+++.+|+|||..|.+|..|+.+++||+.
T Consensus       298 ~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlk  377 (506)
T KOG0289|consen  298 SSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLK  377 (506)
T ss_pred             ccccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcC
Confidence            8899999999999999999999999999999999999998776532 133458999999999999999999999999995


Q ss_pred             CCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCc--cEEEEEEcCCCcEEEEEECCCe
Q psy17610        240 RESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPS--MIMSAAYHPSEVQLITCSTNKM  317 (515)
Q Consensus       240 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~  317 (515)
                      .  +.....+++|.++|..++|+.+|-++++++.|+.|++||++..+....+..+.  ++.++.|.+.|.+|+.++.+=.
T Consensus       378 s--~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l~  455 (506)
T KOG0289|consen  378 S--QTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAGSDLQ  455 (506)
T ss_pred             C--ccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeeccccccceeEEEcCCCCeEEeecceeE
Confidence            4  44677899999999999999999999999999999999999998888887776  5999999999999999988777


Q ss_pred             EEEEeCC--CCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEc
Q psy17610        318 IDYWETC--DGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMY  366 (515)
Q Consensus       318 i~~~d~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~  366 (515)
                      |++++-.  +...+..+..+. +..+++.|....+++++++.|..++++.+
T Consensus       456 Vy~~~k~~k~W~~~~~~~~~s-g~st~v~Fg~~aq~l~s~smd~~l~~~a~  505 (506)
T KOG0289|consen  456 VYICKKKTKSWTEIKELADHS-GLSTGVRFGEHAQYLASTSMDAILRLYAL  505 (506)
T ss_pred             EEEEecccccceeeehhhhcc-cccceeeecccceEEeeccchhheEEeec
Confidence            7777643  455666666654 68889999999999999999998888754

>KOG0288|consensus

Probab=100.00  E-value=1.2e-33  Score=236.46  Aligned_cols=284  Identities=20%  Similarity=0.298  Sum_probs=247.6

Q ss_pred             EeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCc--eeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEec
Q psy17610        118 LVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLN--ELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTP  195 (515)
Q Consensus       118 ~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~  195 (515)
                      ..+..|.+.+..+.|-++...|++++.|..|++|++...+  .+.++.+..+.++.+.|.++++++++++.|+.+++|++
T Consensus       169 ~~ld~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnv  248 (459)
T KOG0288|consen  169 FVLDAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNV  248 (459)
T ss_pred             hhhhccccccceeEEccCcchhhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCCCceeeeec
Confidence            3456699999999999998899999999999999998766  66778888899999999999999999999999999999


Q ss_pred             CCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCC
Q psy17610        196 QSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDG  275 (515)
Q Consensus       196 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~  275 (515)
                      ...+...++ .+|...|+++.|......+++|+.|.+|++||+..  ..+..++. ..+.+..+..+  ...++++..|+
T Consensus       249 d~~r~~~TL-sGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k--~~C~kt~l-~~S~cnDI~~~--~~~~~SgH~Dk  322 (459)
T KOG0288|consen  249 DSLRLRHTL-SGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQK--AYCSKTVL-PGSQCNDIVCS--ISDVISGHFDK  322 (459)
T ss_pred             cchhhhhhh-cccccceeeehhhccccceeeccccchhhhhhhhh--hheecccc-ccccccceEec--ceeeeeccccc
Confidence            999999888 68999999999998777799999999999999953  33332221 23445555554  46688999999


Q ss_pred             cEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCC---CccEEEEEEcCCCCEE
Q psy17610        276 TCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSD---VAAVNCVDFVDDGKYF  352 (515)
Q Consensus       276 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~l  352 (515)
                      +|++||.++..+.......+.++++..++++..+++++.|..+.+.|+++.+....+....   ....+.+.|||++.|+
T Consensus       323 kvRfwD~Rs~~~~~sv~~gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~Yv  402 (459)
T KOG0288|consen  323 KVRFWDIRSADKTRSVPLGGRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYV  402 (459)
T ss_pred             ceEEEeccCCceeeEeecCcceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEECCCCcee
Confidence            9999999999999999999999999999999999999999999999999998888776432   2357789999999999


Q ss_pred             EEEcCCCeEEEEEccCCeeeeeccCCCC--CeeEEEECCCCcEEEEEeCCCcEEEEe
Q psy17610        353 LTGGADQIVKMWMYREGVPCFVGIGHAA--SITKIKISPDKKVIVSVSADGGIFLWT  407 (515)
Q Consensus       353 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~i~~~~~~~~~~~l~~~~~dg~i~iw~  407 (515)
                      ++|+.||.|+||++.++++...+.....  .|++++|+|.|..|++++.++.+.+|.
T Consensus       403 aAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW~  459 (459)
T KOG0288|consen  403 AAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLWT  459 (459)
T ss_pred             eeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEecC
Confidence            9999999999999999998887765544  499999999999999999999999993

>KOG0310|consensus

Probab=100.00  E-value=2.4e-32  Score=233.85  Aligned_cols=283  Identities=14%  Similarity=0.241  Sum_probs=238.3

Q ss_pred             EEecCCCcEEEEEEecCCCE-EEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCC
Q psy17610         76 YLLKDDSGISSLQYNPVNNK-VFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVR  154 (515)
Q Consensus        76 ~~~~~~~~v~~~~~s~~~~~-l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~  154 (515)
                      ........|++++|||...+ +|+.+ .-.+.+|+..+ ......+......|.++.|..||+.++++...|.|+|+|+.
T Consensus        21 ~~~ke~~~vssl~fsp~~P~d~aVt~-S~rvqly~~~~-~~~~k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k   98 (487)
T KOG0310|consen   21 PVHKEHNSVSSLCFSPKHPYDFAVTS-SVRVQLYSSVT-RSVRKTFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMK   98 (487)
T ss_pred             ccccccCcceeEecCCCCCCceEEec-ccEEEEEecch-hhhhhhHHhhccceeEEEeecCCeEEEccCCcCcEEEeccc
Confidence            34445689999999996654 45544 34799999988 45555455578889999999999999999999999999987


Q ss_pred             CCceeEEEEecCeEEEEEEEeeCCC-EEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcC-CCCEEEEecCCCc
Q psy17610        155 TLNELLRISVMNMICACIVFTYDGK-AILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQ-DGTRLLSGGGEGQ  232 (515)
Q Consensus       155 ~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~  232 (515)
                      +...++.+..|+.++..+.|+|+++ .+++|++|+.+++||+.+......+ .+|+..|.|.+|+| ++..+++|+.||.
T Consensus        99 ~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l-~~htDYVR~g~~~~~~~hivvtGsYDg~  177 (487)
T KOG0310|consen   99 SRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAEL-SGHTDYVRCGDISPANDHIVVTGSYDGK  177 (487)
T ss_pred             cHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEe-cCCcceeEeeccccCCCeEEEecCCCce
Confidence            7677888999999999999999765 5668888899999999998875455 79999999999999 4568999999999


Q ss_pred             EEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceE-EEEEE-cCccEEEEEEcCCCcEEE
Q psy17610        233 VRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTR-LIIMI-LPSMIMSAAYHPSEVQLI  310 (515)
Q Consensus       233 i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~-~~~~~-~~~~~~~~~~~~~~~~l~  310 (515)
                      |++||.+..+ ..+.. -.|..+|..+.+-|.|..+++++.. .+++||+.++.. +.... +...++|+.+..++..|+
T Consensus       178 vrl~DtR~~~-~~v~e-lnhg~pVe~vl~lpsgs~iasAgGn-~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLl  254 (487)
T KOG0310|consen  178 VRLWDTRSLT-SRVVE-LNHGCPVESVLALPSGSLIASAGGN-SVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLL  254 (487)
T ss_pred             EEEEEeccCC-ceeEE-ecCCCceeeEEEcCCCCEEEEcCCC-eEEEEEecCCceehhhhhcccceEEEEEeecCCceEe
Confidence            9999997654 33333 4588999999999999999998864 799999986544 33333 677899999999999999


Q ss_pred             EEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEc
Q psy17610        311 TCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMY  366 (515)
Q Consensus       311 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~  366 (515)
                      +++-|+.+++||+.+.+.+..+.-+  ++|.+++.+|+++.++.|..||.+.+-+.
T Consensus       255 S~sLD~~VKVfd~t~~Kvv~s~~~~--~pvLsiavs~dd~t~viGmsnGlv~~rr~  308 (487)
T KOG0310|consen  255 SGSLDRHVKVFDTTNYKVVHSWKYP--GPVLSIAVSPDDQTVVIGMSNGLVSIRRR  308 (487)
T ss_pred             ecccccceEEEEccceEEEEeeecc--cceeeEEecCCCceEEEecccceeeeehh
Confidence            9999999999999999999988876  89999999999999999999998877644

>KOG0288|consensus

Probab=100.00  E-value=2.1e-33  Score=235.04  Aligned_cols=283  Identities=16%  Similarity=0.233  Sum_probs=247.5

Q ss_pred             EEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCc-eeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeC
Q psy17610         75 LYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGF-TLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSV  153 (515)
Q Consensus        75 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~  153 (515)
                      ..+..|.+.+..+.|-++...|++|+.|..|++|+...++ .....+.|..++|+++.|.++++++++++.|+.+++|++
T Consensus       169 ~~ld~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnv  248 (459)
T KOG0288|consen  169 FVLDAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNV  248 (459)
T ss_pred             hhhhccccccceeEEccCcchhhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCCCceeeeec
Confidence            3455799999999999998999999999999999998643 245567778889999999999999999999999999999


Q ss_pred             CCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcE
Q psy17610        154 RTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQV  233 (515)
Q Consensus       154 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i  233 (515)
                      ...+...++.+|.+.|+++.|......+++|+.|.+|+.||+....+..++.  ....+..+..+  ...+++|-.|+.|
T Consensus       249 d~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l--~~S~cnDI~~~--~~~~~SgH~Dkkv  324 (459)
T KOG0288|consen  249 DSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVL--PGSQCNDIVCS--ISDVISGHFDKKV  324 (459)
T ss_pred             cchhhhhhhcccccceeeehhhccccceeeccccchhhhhhhhhhheecccc--ccccccceEec--ceeeeecccccce
Confidence            9999999999999999999998877779999999999999999988887763  33445666665  4568899999999


Q ss_pred             EEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC-----ccEEEEEEcCCCcE
Q psy17610        234 RIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP-----SMIMSAAYHPSEVQ  308 (515)
Q Consensus       234 ~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-----~~~~~~~~~~~~~~  308 (515)
                      ++||.+..  ......+.+. .|+++..++++..+++++.|.++.+.|+++.+....+...     ...+.+.|+|++.|
T Consensus       325 RfwD~Rs~--~~~~sv~~gg-~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~Y  401 (459)
T KOG0288|consen  325 RFWDIRSA--DKTRSVPLGG-RVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSY  401 (459)
T ss_pred             EEEeccCC--ceeeEeecCc-ceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEECCCCce
Confidence            99999644  3444455554 8999999999999999999999999999999888877654     35888999999999


Q ss_pred             EEEEECCCeEEEEeCCCCceEEEEecCCCc-cEEEEEEcCCCCEEEEEcCCCeEEEE
Q psy17610        309 LITCSTNKMIDYWETCDGSIIRSLEGSDVA-AVNCVDFVDDGKYFLTGGADQIVKMW  364 (515)
Q Consensus       309 l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~~dg~i~i~  364 (515)
                      +++|+.||.+++|++.++++...+...... .|++++|+|.|..|++++.++.+.+|
T Consensus       402 vaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW  458 (459)
T KOG0288|consen  402 VAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLW  458 (459)
T ss_pred             eeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEec
Confidence            999999999999999999999998877644 69999999999999999999999998

>KOG0640|consensus

Probab=100.00  E-value=2.9e-32  Score=219.92  Aligned_cols=292  Identities=18%  Similarity=0.297  Sum_probs=242.7

Q ss_pred             eEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCC------------C------ceEEEecCCCCCCeEEEEEcCC
Q psy17610        159 LLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQS------------G------KLKFIIPNAHNRGVTALAITQD  220 (515)
Q Consensus       159 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~------------~------~~~~~~~~~~~~~v~~~~~~~~  220 (515)
                      ...+..|+.++.+.+|+|||.++++|+.|..|++.|++.            +      -.+.++ ..|..+|+++.|+|.
T Consensus       105 t~ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTl-YDH~devn~l~FHPr  183 (430)
T KOG0640|consen  105 TKYLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTL-YDHVDEVNDLDFHPR  183 (430)
T ss_pred             eEEEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeeh-hhccCcccceeecch
Confidence            445678999999999999999999999999999999761            1      123334 579999999999999


Q ss_pred             CCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEE----cCcc
Q psy17610        221 GTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMI----LPSM  296 (515)
Q Consensus       221 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~----~~~~  296 (515)
                      ...|++|+.|++|++||+.....+..........+|.++.|+|.|.+++.|..-.++++||+++.++.....    +...
T Consensus       184 e~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht~a  263 (430)
T KOG0640|consen  184 ETILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGA  263 (430)
T ss_pred             hheEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCcccccccc
Confidence            999999999999999999654443333334456789999999999999999999999999999988876554    3346


Q ss_pred             EEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecC-CCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeec
Q psy17610        297 IMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGS-DVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVG  375 (515)
Q Consensus       297 ~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~  375 (515)
                      |.++.+++.+++.++++.||.|++||--+++++.++... ....|.+..|..+|+++++.+.|..+++|.+.+++++..+
T Consensus       264 i~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~~Y  343 (430)
T KOG0640|consen  264 ITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRMLKEY  343 (430)
T ss_pred             eeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCCceEEEE
Confidence            999999999999999999999999999999999998754 4467899999999999999999999999999999999887


Q ss_pred             cCCC-----CCeeEEEECCCCcEEEEEeC-CCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeee
Q psy17610        376 IGHA-----ASITKIKISPDKKVIVSVSA-DGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAY  449 (515)
Q Consensus       376 ~~~~-----~~i~~~~~~~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  449 (515)
                      .+-.     .--+...|+....+++.-.. .+.+.-||.++..                   .......+|.+.+..+.-
T Consensus       344 tGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtad-------------------r~~l~slgHn~a~R~i~H  404 (430)
T KOG0640|consen  344 TGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTAD-------------------RVALLSLGHNGAVRWIVH  404 (430)
T ss_pred             ecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchh-------------------hhhhcccCCCCCceEEEe
Confidence            6531     22344567777777766544 5679999987654                   233445678889999999


Q ss_pred             ccCCcEEEEeecCCeEEEEec
Q psy17610        450 HPSEVQLITCSTNKMIDYWET  470 (515)
Q Consensus       450 s~~~~~l~~~~~dg~v~iwd~  470 (515)
                      ||.+.-+.+++.|-.+++|--
T Consensus       405 SP~~p~FmTcsdD~raRFWyr  425 (430)
T KOG0640|consen  405 SPVEPAFMTCSDDFRARFWYR  425 (430)
T ss_pred             CCCCCceeeecccceeeeeee
Confidence            999999999999999999964

>KOG0305|consensus

Probab=100.00  E-value=8.7e-32  Score=239.68  Aligned_cols=275  Identities=19%  Similarity=0.330  Sum_probs=237.4

Q ss_pred             EEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCC
Q psy17610        130 LQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHN  209 (515)
Q Consensus       130 ~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~  209 (515)
                      +.|+..  .+++.+....|.+|+..+++.......+...|+++.|+++|.+|++|..+|.|.+||..+.+.+..+...|.
T Consensus       183 ldWss~--n~laValg~~vylW~~~s~~v~~l~~~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~  260 (484)
T KOG0305|consen  183 LDWSSA--NVLAVALGQSVYLWSASSGSVTELCSFGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHA  260 (484)
T ss_pred             hhcccC--CeEEEEecceEEEEecCCCceEEeEecCCCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCCcC
Confidence            556643  356666677899999999886666665588999999999999999999999999999999988888844499


Q ss_pred             CCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEE
Q psy17610        210 RGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLI  289 (515)
Q Consensus       210 ~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~  289 (515)
                      ..|-+++|.  +..+.+|+.++.|..+|++....... .+.+|...|..+.|++|+.++++|+.|+.+.|||....++..
T Consensus       261 ~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~~~~-~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~  337 (484)
T KOG0305|consen  261 SRVGSLAWN--SSVLSSGSRDGKILNHDVRISQHVVS-TLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKF  337 (484)
T ss_pred             ceeEEEecc--CceEEEecCCCcEEEEEEecchhhhh-hhhcccceeeeeEECCCCCeeccCCCccceEeccCCCccccE
Confidence            999999998  66899999999999999975544433 588999999999999999999999999999999997666555


Q ss_pred             EE-EcCccEEEEEEcCC-CcEEEEEE--CCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEE--cCCCeEEE
Q psy17610        290 IM-ILPSMIMSAAYHPS-EVQLITCS--TNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTG--GADQIVKM  363 (515)
Q Consensus       290 ~~-~~~~~~~~~~~~~~-~~~l~~~~--~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~--~~dg~i~i  363 (515)
                      .+ .+...+..++|+|- ...||+|+  .|+.|++||..++..+..+...  ..|..+.|++..+-|+++  ..++.|.|
T Consensus       338 ~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdtg--sQVcsL~Wsk~~kEi~sthG~s~n~i~l  415 (484)
T KOG0305|consen  338 TFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDTG--SQVCSLIWSKKYKELLSTHGYSENQITL  415 (484)
T ss_pred             EEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEecccccC--CceeeEEEcCCCCEEEEecCCCCCcEEE
Confidence            55 55678999999995 56667654  4899999999999999988876  789999999988766654  45778999


Q ss_pred             EEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCC
Q psy17610        364 WMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPEL  411 (515)
Q Consensus       364 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  411 (515)
                      |+..+.+++..+.+|...|..++++|||..+++++.|.++++|++-..
T Consensus       416 w~~ps~~~~~~l~gH~~RVl~la~SPdg~~i~t~a~DETlrfw~~f~~  463 (484)
T KOG0305|consen  416 WKYPSMKLVAELLGHTSRVLYLALSPDGETIVTGAADETLRFWNLFDE  463 (484)
T ss_pred             EeccccceeeeecCCcceeEEEEECCCCCEEEEecccCcEEeccccCC
Confidence            999999999999999999999999999999999999999999998664

>KOG0277|consensus

Probab=100.00  E-value=4.3e-32  Score=212.78  Aligned_cols=277  Identities=17%  Similarity=0.239  Sum_probs=224.0

Q ss_pred             EEEEeCCC-CcEEEEEe-------cCCcEEEEeCCCCceeEEEE--ecCeEEEEEEEeeCC-CEEEEEeCCCeEEEEecC
Q psy17610        128 YDLQFPVN-FSSVFATC-------SKNDIRIWSVRTLNELLRIS--VMNMICACIVFTYDG-KAILSGWNDGFIRCFTPQ  196 (515)
Q Consensus       128 ~~~~~~~~-~~~l~~~~-------~d~~i~iw~~~~~~~~~~~~--~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~~~~~  196 (515)
                      .++.|||- ..+|+++.       ..|++.|.++...+-+....  .-.+.+..++|+++. +.+++++.||++++||+.
T Consensus        12 ysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~   91 (311)
T KOG0277|consen   12 YSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSENHENQVIAASGDGSLRLFDLT   91 (311)
T ss_pred             ceeEecccccchhheeehhhcccccCceEEEEecCCCCCeEEEEeeecccceeEeeecCCCcceEEEEecCceEEEeccC
Confidence            57889983 23444433       26889999997555554443  345678899999865 578889999999999965


Q ss_pred             CC-ceEEEecCCCCCCeEEEEEcC-CCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEec-CCCEEEEEeC
Q psy17610        197 SG-KLKFIIPNAHNRGVTALAITQ-DGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKS-DSKEAMSAST  273 (515)
Q Consensus       197 ~~-~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~  273 (515)
                      .. .++..+ +.|...|.++.|++ +++.+++++.|++|++|+..  .+..++++.+|...|....|+| ..+.+++++.
T Consensus        92 ~~s~Pi~~~-kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~--r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sg  168 (311)
T KOG0277|consen   92 MPSKPIHKF-KEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPN--RPNSVQTFNGHNSCIYQAAFSPHIPNLFASASG  168 (311)
T ss_pred             CCCcchhHH-HhhhhheEEeccccccceeEEeeccCCceEeecCC--CCcceEeecCCccEEEEEecCCCCCCeEEEccC
Confidence            44 345555 78999999999999 66778889999999999984  4566778999999999999998 5788999999


Q ss_pred             CCcEEEEEcccceEEEEEEcC-ccEEEEEEcC-CCcEEEEEECCCeEEEEeCCCC-ceEEEEecCCCccEEEEEEcCC-C
Q psy17610        274 DGTCVLWDLIKSTRLIIMILP-SMIMSAAYHP-SEVQLITCSTNKMIDYWETCDG-SIIRSLEGSDVAAVNCVDFVDD-G  349 (515)
Q Consensus       274 d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~-~~~~l~~~~~~~~i~~~d~~~~-~~~~~~~~~~~~~i~~~~~~~~-~  349 (515)
                      |+++++||++.......+..+ .++.++.|+. +...+++++.|+.|+.||++.- .++..+.+|. -.|+.+.|||. .
T Consensus       169 d~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~-~AVRkvk~Sph~~  247 (311)
T KOG0277|consen  169 DGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHG-LAVRKVKFSPHHA  247 (311)
T ss_pred             CceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEecCCCceEEEEehhhccccceeecCCc-eEEEEEecCcchh
Confidence            999999999875444445544 4899999988 5677889999999999999885 4566776665 89999999994 5


Q ss_pred             CEEEEEcCCCeEEEEEccCC-eeeeeccCCCCCeeEEEECC-CCcEEEEEeCCCcEEEEeC
Q psy17610        350 KYFLTGGADQIVKMWMYREG-VPCFVGIGHAASITKIKISP-DKKVIVSVSADGGIFLWTF  408 (515)
Q Consensus       350 ~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iw~~  408 (515)
                      .+|++++.|-+++|||...+ ..+.+...|+.-+..+.|++ +..++|+++.|+.++||+.
T Consensus       248 ~lLaSasYDmT~riw~~~~~ds~~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~p  308 (311)
T KOG0277|consen  248 SLLASASYDMTVRIWDPERQDSAIETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYVWNP  308 (311)
T ss_pred             hHhhhccccceEEecccccchhhhhhhhccceEEeccccccccCceeeecccccceeeecc
Confidence            68899999999999999744 45566778999999999998 6789999999999999973

>KOG0772|consensus

Probab=100.00  E-value=5.2e-32  Score=233.07  Aligned_cols=293  Identities=16%  Similarity=0.257  Sum_probs=237.3

Q ss_pred             EEEEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCC----ceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcE
Q psy17610         73 TALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSG----FTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDI  148 (515)
Q Consensus        73 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~----~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i  148 (515)
                      ..+.+.+|...|+++++.|.|.+|++|+.|..|++||....    .....+.......|.+++|++.|..|++.+.....
T Consensus       159 hEi~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqa  238 (641)
T KOG0772|consen  159 HEIQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQA  238 (641)
T ss_pred             ceEeccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCcce
Confidence            45667788899999999999999999999999999999752    22233444556689999999999999999999999


Q ss_pred             EEEeCCCCceeE------------EEEecCeEEEEEEEeeCC-CEEEEEeCCCeEEEEecCCCceEEE-e----cCCCCC
Q psy17610        149 RIWSVRTLNELL------------RISVMNMICACIVFTYDG-KAILSGWNDGFIRCFTPQSGKLKFI-I----PNAHNR  210 (515)
Q Consensus       149 ~iw~~~~~~~~~------------~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~~~~~~~~~~~~-~----~~~~~~  210 (515)
                      +|+|-+..+.+.            .-++|...++|.+|+|+. ..+++++.||++++||+...+.... +    ..+..-
T Consensus       239 kl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv  318 (641)
T KOG0772|consen  239 KLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRV  318 (641)
T ss_pred             eEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCccc
Confidence            999966433322            224788899999999976 4788999999999999986543222 2    123455


Q ss_pred             CeEEEEEcCCCCEEEEecCCCcEEEEEccCCcee-eEEeeccccC--ceEEEEEecCCCEEEEEeCCCcEEEEEcccceE
Q psy17610        211 GVTALAITQDGTRLLSGGGEGQVRIWKLTRESQS-LQCVLKEHTS--SVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTR  287 (515)
Q Consensus       211 ~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~-~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~  287 (515)
                      +++.++|+++|+.||+|+.||.|.+|+....... ....-..|..  .|+++.|+++|++|++-+.|+++++||++..+.
T Consensus       319 ~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kk  398 (641)
T KOG0772|consen  319 PVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKK  398 (641)
T ss_pred             CceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeecccccc
Confidence            7899999999999999999999999997543322 2334457877  899999999999999999999999999998654


Q ss_pred             EEEE----EcCccEEEEEEcCCCcEEEEEEC------CCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcC
Q psy17610        288 LIIM----ILPSMIMSAAYHPSEVQLITCST------NKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA  357 (515)
Q Consensus       288 ~~~~----~~~~~~~~~~~~~~~~~l~~~~~------~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~  357 (515)
                      ....    ....+-+.++|+|+.+.+++|..      .|.+.+||..+...+.++.... ..|..+.|+|.-+.+++|+.
T Consensus       399 pL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~~-aSvv~~~WhpkLNQi~~gsg  477 (641)
T KOG0772|consen  399 PLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDIST-ASVVRCLWHPKLNQIFAGSG  477 (641)
T ss_pred             chhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEecCCC-ceEEEEeecchhhheeeecC
Confidence            3222    23346788999999999999864      5689999999999999988775 78888999999888999999


Q ss_pred             CCeEEEEEc
Q psy17610        358 DQIVKMWMY  366 (515)
Q Consensus       358 dg~i~i~d~  366 (515)
                      ||.+++|--
T Consensus       478 dG~~~vyYd  486 (641)
T KOG0772|consen  478 DGTAHVYYD  486 (641)
T ss_pred             CCceEEEEC
Confidence            999998743

>KOG0308|consensus

Probab=100.00  E-value=1.4e-32  Score=243.20  Aligned_cols=359  Identities=18%  Similarity=0.264  Sum_probs=276.2

Q ss_pred             CCCcEE---EEEEec-CCCEEEEEecCceEEEEECCCCce-----eEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEE
Q psy17610         80 DDSGIS---SLQYNP-VNNKVFVGTVNCEIFLIDMNSGFT-----LTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRI  150 (515)
Q Consensus        80 ~~~~v~---~~~~s~-~~~~l~~~~~d~~i~iw~~~~~~~-----~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~i  150 (515)
                      |...|.   ++..++ .+++|++|+.||.|++|+......     .....+.|.+.|+.++...+++.|++++.|-+|++
T Consensus        20 n~~~v~~~~~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~   99 (735)
T KOG0308|consen   20 NRNGVNITKALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVKV   99 (735)
T ss_pred             ccccccchhhccccCCCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEE
Confidence            445555   556664 677899999999999999865322     23445679999999999999999999999999999


Q ss_pred             EeCCCC--ceeEEEEecCeEEEEEEE-eeCCCEEEEEeCCCeEEEEecCCCc--eE--------EEecCCCCCCeEEEEE
Q psy17610        151 WSVRTL--NELLRISVMNMICACIVF-TYDGKAILSGWNDGFIRCFTPQSGK--LK--------FIIPNAHNRGVTALAI  217 (515)
Q Consensus       151 w~~~~~--~~~~~~~~~~~~v~~~~~-~~~~~~l~~~~~dg~i~~~~~~~~~--~~--------~~~~~~~~~~v~~~~~  217 (515)
                      |+...+  -++.++..|.+.|.|+++ .++...+|+|+-|+.|.+||++++.  .+        ..+..++..+|.+++.
T Consensus       100 W~~~~~~~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~  179 (735)
T KOG0308|consen  100 WNAHKDNTFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAM  179 (735)
T ss_pred             eecccCcchhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeec
Confidence            999887  577888999999999999 8888899999999999999999772  22        2222378889999999


Q ss_pred             cCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCc-c
Q psy17610        218 TQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPS-M  296 (515)
Q Consensus       218 ~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~  296 (515)
                      ++.|..+++|+.++.+++||.+  .......+.+|+..|..+..++||..+++++.||+|++||+...+++..+..+. .
T Consensus       180 N~t~t~ivsGgtek~lr~wDpr--t~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~  257 (735)
T KOG0308|consen  180 NQTGTIIVSGGTEKDLRLWDPR--TCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEG  257 (735)
T ss_pred             CCcceEEEecCcccceEEeccc--cccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEEeccCc
Confidence            9999999999999999999995  455667788999999999999999999999999999999999999998887654 6


Q ss_pred             EEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeecc
Q psy17610        297 IMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGI  376 (515)
Q Consensus       297 ~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~  376 (515)
                      +.++..+|+-..+++|+.+|.|..-|+++......+-... .++..+..+...+-+-+++.|+.|+-|..+...      
T Consensus       258 VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~~~~tlick~d-aPv~~l~~~~~~~~~WvtTtds~I~rW~~~~~~------  330 (735)
T KOG0308|consen  258 VWALQSSPSFTHVYSGGRDGNIYRTDLRNPAKSTLICKED-APVLKLHLHEHDNSVWVTTTDSSIKRWKLEPDI------  330 (735)
T ss_pred             eEEEeeCCCcceEEecCCCCcEEecccCCchhheEeecCC-CchhhhhhccccCCceeeeccccceecCCcccc------
Confidence            8999999999999999999999999998864333333222 677788777655555778889999988653221      


Q ss_pred             CCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEE
Q psy17610        377 GHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQL  456 (515)
Q Consensus       377 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l  456 (515)
                               ++++.+++.. -+.|......+......                      ........+...+.-.|.+++
T Consensus       331 ---------~l~~s~~~~~-~~T~~~~~~~~~~~tp~----------------------~vi~Gg~ai~k~~mL~dkRhV  378 (735)
T KOG0308|consen  331 ---------ALSVSGDLDF-FSTDSNNHSCDLTNTPD----------------------SVIPGGAAIKKHAMLNDKRHV  378 (735)
T ss_pred             ---------ccccCCCCCc-ccccCCCccccccCCCc----------------------eeccCchhhhhhhhhcCcceE
Confidence                     3344444443 22333333333211000                      000011225555666788999


Q ss_pred             EEeecCCeEEEEecCCCeeeeee
Q psy17610        457 ITCSTNKMIDYWETCDGSIIRSL  479 (515)
Q Consensus       457 ~~~~~dg~v~iwd~~~~~~~~~~  479 (515)
                      ++-+..|.+.+||+-..+.+..+
T Consensus       379 lTkDa~gnv~lwDIl~~~~~~d~  401 (735)
T KOG0308|consen  379 LTKDAKGNVALWDILACVKVEDF  401 (735)
T ss_pred             eeecCCCCEEEEEeeeeeehhhc
Confidence            99999999999998766655444

>KOG0772|consensus

Probab=100.00  E-value=1e-31  Score=231.23  Aligned_cols=301  Identities=16%  Similarity=0.221  Sum_probs=233.2

Q ss_pred             ceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCce----EEEecCCCCCCeEEEEEcCCCCEEEEecCCCc
Q psy17610        157 NELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKL----KFIIPNAHNRGVTALAITQDGTRLLSGGGEGQ  232 (515)
Q Consensus       157 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~  232 (515)
                      .....+..|...|.++++.|.|..|++|+.|-.|++||+.....    ...+.......|+++.|++.|..|++.+...+
T Consensus       158 shEi~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aq  237 (641)
T KOG0772|consen  158 SHEIQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQ  237 (641)
T ss_pred             cceEeccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCcc
Confidence            34456778889999999999999999999999999999875432    33333445668999999999999999988899


Q ss_pred             EEEEEccCCcee----------eEEeeccccCceEEEEEecCC-CEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEE
Q psy17610        233 VRIWKLTRESQS----------LQCVLKEHTSSVSVIQIKSDS-KEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAA  301 (515)
Q Consensus       233 i~iw~~~~~~~~----------~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~  301 (515)
                      .+++|-+.....          -....++|...+++.+|+|.. +.+++++.||++++||+.+.+....           
T Consensus       238 akl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~q-----------  306 (641)
T KOG0772|consen  238 AKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQ-----------  306 (641)
T ss_pred             eeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhhee-----------
Confidence            999997522111          112346899999999999965 4688999999999999876542211           


Q ss_pred             EcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCe---eeeeccCC
Q psy17610        302 YHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGV---PCFVGIGH  378 (515)
Q Consensus       302 ~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~  378 (515)
                                        ++..+.       .+...-+++.++|+++|+++|+|+.||.|.+|+..+..   ....-..|
T Consensus       307 ------------------Vik~k~-------~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH  361 (641)
T KOG0772|consen  307 ------------------VIKTKP-------AGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAH  361 (641)
T ss_pred             ------------------EEeecc-------CCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeecc
Confidence                              111100       11122577889999999999999999999999975432   22334567


Q ss_pred             CC--CeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEE
Q psy17610        379 AA--SITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQL  456 (515)
Q Consensus       379 ~~--~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l  456 (515)
                      ..  .|+++.||+||++|++-+.|+++++||++.....+.....+...                 -.-+.++|||+.+++
T Consensus       362 ~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkpL~~~tgL~t~-----------------~~~tdc~FSPd~kli  424 (641)
T KOG0772|consen  362 LPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKKPLNVRTGLPTP-----------------FPGTDCCFSPDDKLI  424 (641)
T ss_pred             CCCCceeEEEeccccchhhhccCCCceeeeeccccccchhhhcCCCcc-----------------CCCCccccCCCceEE
Confidence            76  89999999999999999999999999999876544333222211                 225678999999999


Q ss_pred             EEeec------CCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEEEE
Q psy17610        457 ITCST------NKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKIC  511 (515)
Q Consensus       457 ~~~~~------dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw  511 (515)
                      ++|..      .|.+.+||..+.+.+..+.-.. ..|..+.|+|.-+.|+.|+.||++++|
T Consensus       425 ~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~~-aSvv~~~WhpkLNQi~~gsgdG~~~vy  484 (641)
T KOG0772|consen  425 LTGTSAPNGMTAGTLFFFDRMTLDTVYKIDIST-ASVVRCLWHPKLNQIFAGSGDGTAHVY  484 (641)
T ss_pred             EecccccCCCCCceEEEEeccceeeEEEecCCC-ceEEEEeecchhhheeeecCCCceEEE
Confidence            99863      5789999999999988887765 889999999999999999999999987

>KOG0268|consensus

Probab=100.00  E-value=5.7e-33  Score=228.60  Aligned_cols=279  Identities=20%  Similarity=0.335  Sum_probs=237.4

Q ss_pred             CCCCCCeEEEEEcCCC-CEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEccc
Q psy17610        206 NAHNRGVTALAITQDG-TRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIK  284 (515)
Q Consensus       206 ~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~  284 (515)
                      .+|...|.+++=+|.. ..+++|+.||.|++||+  .+..+...+..|.+.|..+++..  ..+++++.|.+|+.|.+..
T Consensus        63 ~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnl--sqR~~~~~f~AH~G~V~Gi~v~~--~~~~tvgdDKtvK~wk~~~  138 (433)
T KOG0268|consen   63 DGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNL--SQRECIRTFKAHEGLVRGICVTQ--TSFFTVGDDKTVKQWKIDG  138 (433)
T ss_pred             cccccccchhhcCcchhhhhhccccCceEEEEeh--hhhhhhheeecccCceeeEEecc--cceEEecCCcceeeeeccC
Confidence            6899999999999966 78999999999999999  45667778999999999999976  6789999999999999865


Q ss_pred             ceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCC-CEEEEEcCCCeEEE
Q psy17610        285 STRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDG-KYFLTGGADQIVKM  363 (515)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~i  363 (515)
                       .+...+...+.+..+.-+..+..+++++.  .|.+||.+...++..+.-.. ..+.++.|+|.. ..|++++.|+.|.+
T Consensus       139 -~p~~tilg~s~~~gIdh~~~~~~FaTcGe--~i~IWD~~R~~Pv~smswG~-Dti~svkfNpvETsILas~~sDrsIvL  214 (433)
T KOG0268|consen  139 -PPLHTILGKSVYLGIDHHRKNSVFATCGE--QIDIWDEQRDNPVSSMSWGA-DSISSVKFNPVETSILASCASDRSIVL  214 (433)
T ss_pred             -CcceeeeccccccccccccccccccccCc--eeeecccccCCccceeecCC-CceeEEecCCCcchheeeeccCCceEE
Confidence             47777777777888887777778877765  59999999999999998766 789999999954 46677779999999


Q ss_pred             EEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCccc
Q psy17610        364 WMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSM  443 (515)
Q Consensus       364 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  443 (515)
                      ||++.+.++.... -...-+.++|+|.+--+++++.|..++.+|++.....                   .....+|.+.
T Consensus       215 yD~R~~~Pl~KVi-~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p-------------------~~v~~dhvsA  274 (433)
T KOG0268|consen  215 YDLRQASPLKKVI-LTMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRP-------------------LNVHKDHVSA  274 (433)
T ss_pred             EecccCCccceee-eeccccceecCccccceeeccccccceehhhhhhccc-------------------chhhccccee
Confidence            9999998887653 2345578999998888999999999999999876532                   2234456778


Q ss_pred             EEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEEEEE
Q psy17610        444 IMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICL  512 (515)
Q Consensus       444 i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~  512 (515)
                      |..+.|||.|+-+++|+.|.+|+||.+..+.-...........|.++.||.|.+++++||+|+.||+|.
T Consensus       275 V~dVdfsptG~EfvsgsyDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWk  343 (433)
T KOG0268|consen  275 VMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDSKYIISGSDDGNVRLWK  343 (433)
T ss_pred             EEEeccCCCcchhccccccceEEEeecCCCcchhhhhHhhhheeeEEEEeccccEEEecCCCcceeeee
Confidence            999999999999999999999999999887766555555557899999999999999999999999996

>KOG0973|consensus

Probab=100.00  E-value=1.8e-31  Score=250.46  Aligned_cols=285  Identities=23%  Similarity=0.297  Sum_probs=242.6

Q ss_pred             CccCeEEEEeCCCCcEEEEEe--cCCcEEEEeCCC------------CceeEEEEecCeEEEEEEEeeCCCEEEEEeCCC
Q psy17610        123 HTSAIYDLQFPVNFSSVFATC--SKNDIRIWSVRT------------LNELLRISVMNMICACIVFTYDGKAILSGWNDG  188 (515)
Q Consensus       123 h~~~v~~~~~~~~~~~l~~~~--~d~~i~iw~~~~------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg  188 (515)
                      +...|.++..+|||..+++++  .|+.++||+.+.            .+.+.+...|.+.|.|+.|+|||++||+|++|+
T Consensus        12 ~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~   91 (942)
T KOG0973|consen   12 NEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDDR   91 (942)
T ss_pred             CCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCcc
Confidence            455799999999999999999  799999999753            234566778999999999999999999999999


Q ss_pred             eEEEEecCC----------C--------ceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeec
Q psy17610        189 FIRCFTPQS----------G--------KLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLK  250 (515)
Q Consensus       189 ~i~~~~~~~----------~--------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~  250 (515)
                      .|.+|....          |        +....+ .+|...|..++|+|++.+|++++.|++|.+||..  +......+.
T Consensus        92 ~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l-~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~--tF~~~~vl~  168 (942)
T KOG0973|consen   92 LVMIWERAEIGSGTVFGSTGGAKNVESWKVVSIL-RGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAK--TFELLKVLR  168 (942)
T ss_pred             eEEEeeecccCCcccccccccccccceeeEEEEE-ecCCCccceeccCCCccEEEEecccceEEEEccc--cceeeeeee
Confidence            999998762          0        123344 7899999999999999999999999999999995  457888999


Q ss_pred             cccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC-------ccEEEEEEcCCCcEEEEEEC----CCeEE
Q psy17610        251 EHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP-------SMIMSAAYHPSEVQLITCST----NKMID  319 (515)
Q Consensus       251 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~~~~----~~~i~  319 (515)
                      +|.+.|..+.|.|-|++|++-+.|++|++|+..+....+.+..+       .....+.|+|||.+|++...    ...+.
T Consensus       169 ~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~  248 (942)
T KOG0973|consen  169 GHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIA  248 (942)
T ss_pred             cccccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeE
Confidence            99999999999999999999999999999998776666655443       34889999999999998643    34688


Q ss_pred             EEeCCCCceEEEEecCCCccEEEEEEcCC-----CC------------EEEEEcCCCeEEEEEccCCeeeeecc-CCCCC
Q psy17610        320 YWETCDGSIIRSLEGSDVAAVNCVDFVDD-----GK------------YFLTGGADQIVKMWMYREGVPCFVGI-GHAAS  381 (515)
Q Consensus       320 ~~d~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~------------~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~  381 (515)
                      |.+-.+.+.-..+-+|+ .++.++.|+|.     .+            .+|+|+.|++|.||.....+++.... -....
T Consensus       249 IieR~tWk~~~~LvGH~-~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~lf~~S  327 (942)
T KOG0973|consen  249 IIERGTWKVDKDLVGHS-APVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVIHNLFNKS  327 (942)
T ss_pred             EEecCCceeeeeeecCC-CceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCchhhhhhhhcCc
Confidence            88888888888888988 79999999982     11            67899999999999987777776543 23578


Q ss_pred             eeEEEECCCCcEEEEEeCCCcEEEEeCCCC
Q psy17610        382 ITKIKISPDKKVIVSVSADGGIFLWTFPEL  411 (515)
Q Consensus       382 i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  411 (515)
                      |..++|+|||..|+++|.||+|.+..++..
T Consensus       328 I~DmsWspdG~~LfacS~DGtV~~i~Fee~  357 (942)
T KOG0973|consen  328 IVDMSWSPDGFSLFACSLDGTVALIHFEEK  357 (942)
T ss_pred             eeeeeEcCCCCeEEEEecCCeEEEEEcchH
Confidence            999999999999999999999999988754

>KOG0277|consensus

Probab=100.00  E-value=1.5e-31  Score=209.79  Aligned_cols=280  Identities=19%  Similarity=0.320  Sum_probs=224.6

Q ss_pred             EEEEEeeC-CCEEEEEe-------CCCeEEEEecCCCceEEEe-cCCCCCCeEEEEEcC-CCCEEEEecCCCcEEEEEcc
Q psy17610        170 ACIVFTYD-GKAILSGW-------NDGFIRCFTPQSGKLKFII-PNAHNRGVTALAITQ-DGTRLLSGGGEGQVRIWKLT  239 (515)
Q Consensus       170 ~~~~~~~~-~~~l~~~~-------~dg~i~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~  239 (515)
                      .++.|||- .++|+++.       ..|.+.|.++...+-+... ...-...+..++|++ ..+.+++++.||.+++||+.
T Consensus        12 ysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~   91 (311)
T KOG0277|consen   12 YSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSENHENQVIAASGDGSLRLFDLT   91 (311)
T ss_pred             ceeEecccccchhheeehhhcccccCceEEEEecCCCCCeEEEEeeecccceeEeeecCCCcceEEEEecCceEEEeccC
Confidence            56788882 23444432       3688999998644433322 124567899999999 45678899999999999975


Q ss_pred             CCceeeEEeeccccCceEEEEEec-CCCEEEEEeCCCcEEEEEcccceEEEEEEcCc-cEEEEEEcCC-CcEEEEEECCC
Q psy17610        240 RESQSLQCVLKEHTSSVSVIQIKS-DSKEAMSASTDGTCVLWDLIKSTRLIIMILPS-MIMSAAYHPS-EVQLITCSTNK  316 (515)
Q Consensus       240 ~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~-~~~l~~~~~~~  316 (515)
                       ....++..++.|...|.++.|++ ++..+++++.|++|++|+...++.+.++..+. .|...+|+|. .+.+++++.|+
T Consensus        92 -~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~  170 (311)
T KOG0277|consen   92 -MPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDG  170 (311)
T ss_pred             -CCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEccCCc
Confidence             44567888999999999999987 45567888999999999999998888886654 7999999994 68889999999


Q ss_pred             eEEEEeCCCCceEEEEecCCCccEEEEEEcC-CCCEEEEEcCCCeEEEEEccCC-eeeeeccCCCCCeeEEEECCC-CcE
Q psy17610        317 MIDYWETCDGSIIRSLEGSDVAAVNCVDFVD-DGKYFLTGGADQIVKMWMYREG-VPCFVGIGHAASITKIKISPD-KKV  393 (515)
Q Consensus       317 ~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~~-~~~  393 (515)
                      .+++||++.......++.|. ..+.|+.|+. +.+++++|+.|+.|+.||+++- .++..+.+|.-.|+.+.|||. ...
T Consensus       171 ~l~lwdvr~~gk~~~i~ah~-~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~l  249 (311)
T KOG0277|consen  171 TLRLWDVRSPGKFMSIEAHN-SEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHASL  249 (311)
T ss_pred             eEEEEEecCCCceeEEEecc-ceeEeecccccCCcEEEecCCCceEEEEehhhccccceeecCCceEEEEEecCcchhhH
Confidence            99999998765555587776 7999999998 6778999999999999999874 678889999999999999994 568


Q ss_pred             EEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccC-CcEEEEeecCCeEEEEec
Q psy17610        394 IVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPS-EVQLITCSTNKMIDYWET  470 (515)
Q Consensus       394 l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~dg~v~iwd~  470 (515)
                      |++++.|-+++|||........                   .....|...+..+.||+- ..++|..+.|+.++||+.
T Consensus       250 LaSasYDmT~riw~~~~~ds~~-------------------e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~p  308 (311)
T KOG0277|consen  250 LASASYDMTVRIWDPERQDSAI-------------------ETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYVWNP  308 (311)
T ss_pred             hhhccccceEEecccccchhhh-------------------hhhhccceEEeccccccccCceeeecccccceeeecc
Confidence            9999999999999987543211                   112235566888899884 569999999999999983

>KOG0299|consensus

Probab=100.00  E-value=2.1e-31  Score=226.29  Aligned_cols=274  Identities=21%  Similarity=0.334  Sum_probs=237.7

Q ss_pred             EEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEe----------------e-ccCccCeEEEEeCCCCc
Q psy17610         75 LYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLV----------------N-TCHTSAIYDLQFPVNFS  137 (515)
Q Consensus        75 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~----------------~-~~h~~~v~~~~~~~~~~  137 (515)
                      .....|.-+|+||+++|++++.++++.+++|.-|++.+|+....+                . .+|...+.+++.++||+
T Consensus       136 ~~~~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgk  215 (479)
T KOG0299|consen  136 RVIGKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGK  215 (479)
T ss_pred             eeeccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCc
Confidence            445579999999999999999999999999999999887543111                1 26888999999999999


Q ss_pred             EEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEE
Q psy17610        138 SVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAI  217 (515)
Q Consensus       138 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~  217 (515)
                      +|++++.|..|.||+.++.+.++.+.+|.+.|.+++|-.....+++++.|+.+++|+++....+.++ .+|+..|..+..
T Consensus       216 ylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetl-yGHqd~v~~Ida  294 (479)
T KOG0299|consen  216 YLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETL-YGHQDGVLGIDA  294 (479)
T ss_pred             EEEecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHH-hCCccceeeech
Confidence            9999999999999999999999999999999999999988889999999999999999988888777 699999999999


Q ss_pred             cCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC---
Q psy17610        218 TQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP---  294 (515)
Q Consensus       218 ~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~---  294 (515)
                      ...++.+-+|+.|+++++|++.   ......+.++.+.+.|++|-.+ ..+++|+.+|.|.+|++.+.+++......   
T Consensus       295 L~reR~vtVGgrDrT~rlwKi~---eesqlifrg~~~sidcv~~In~-~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv  370 (479)
T KOG0299|consen  295 LSRERCVTVGGRDRTVRLWKIP---EESQLIFRGGEGSIDCVAFIND-EHFVSGSDNGSIALWSLLKKKPLFTSRLAHGV  370 (479)
T ss_pred             hcccceEEeccccceeEEEecc---ccceeeeeCCCCCeeeEEEecc-cceeeccCCceEEEeeecccCceeEeeccccc
Confidence            9888888888899999999994   2334467888999999999755 68999999999999999998887765422   


Q ss_pred             ----------ccEEEEEEcCCCcEEEEEECCCeEEEEeCCCC----ceEEEEecCCCccEEEEEEcCCCCEEEEE
Q psy17610        295 ----------SMIMSAAYHPSEVQLITCSTNKMIDYWETCDG----SIIRSLEGSDVAAVNCVDFVDDGKYFLTG  355 (515)
Q Consensus       295 ----------~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~----~~~~~~~~~~~~~i~~~~~~~~~~~l~~~  355 (515)
                                ..+++++..|...++++|+.+|.+++|-+..+    .++..+..  .+-|++++|+++|+.+++|
T Consensus       371 ~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~ls~--~GfVNsl~f~~sgk~ivag  443 (479)
T KOG0299|consen  371 IPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRAINLLYSLSL--VGFVNSLAFSNSGKRIVAG  443 (479)
T ss_pred             cCCccccccccceeeeEecccCceEEecCCCCceEEEEecCCccccceeeeccc--ccEEEEEEEccCCCEEEEe
Confidence                      15889999999999999999999999998887    34444543  3789999999999977766

>KOG1445|consensus

Probab=100.00  E-value=4e-31  Score=233.48  Aligned_cols=408  Identities=14%  Similarity=0.201  Sum_probs=285.3

Q ss_pred             EEEecCCCcEEEEEEec-CCCEEEEEecCceEEEEECCCCcee-----EEeeccCccCeEEEEeCCCCcEEEEEecCCcE
Q psy17610         75 LYLLKDDSGISSLQYNP-VNNKVFVGTVNCEIFLIDMNSGFTL-----TLVNTCHTSAIYDLQFPVNFSSVFATCSKNDI  148 (515)
Q Consensus        75 ~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~iw~~~~~~~~-----~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i  148 (515)
                      -.+.+|...|+.+.|+| +..+||+|+.|..++||.+..|...     ...+.+..-.|.++.|+|...-|++++..|++
T Consensus        73 ~~l~~H~d~VtDl~FspF~D~LLAT~S~D~~VKiW~lp~g~~q~LSape~~~g~~~~~vE~l~fHpTaDgil~s~a~g~v  152 (1012)
T KOG1445|consen   73 GILAAHGDQVTDLGFSPFADELLATCSRDEPVKIWKLPRGHSQKLSAPEIDVGGGNVIVECLRFHPTADGILASGAHGSV  152 (1012)
T ss_pred             ceeecccceeeccCccccchhhhhcccCCCeeEEEecCCCcccccCCcceeecCCceEEEEeecccCcCceEEeccCceE
Confidence            34667999999999999 7789999999999999999854322     22344445578999999988889999999999


Q ss_pred             EEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCC-CceEEEecCCCCCC-eEEEEEcCCCCEEEE
Q psy17610        149 RIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQS-GKLKFIIPNAHNRG-VTALAITQDGTRLLS  226 (515)
Q Consensus       149 ~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~-~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~  226 (515)
                      +|||+.+++.+..+.+|...|.++.|+.||..|++.+.|..|+|||.+. ++.++.. .+|.+. =..+.|.-+-..|++
T Consensus       153 ~i~D~stqk~~~el~~h~d~vQSa~WseDG~llatscKdkqirifDPRa~~~piQ~t-e~H~~~rdsRv~w~Gn~~rlis  231 (1012)
T KOG1445|consen  153 YITDISTQKTAVELSGHTDKVQSADWSEDGKLLATSCKDKQIRIFDPRASMEPIQTT-EGHGGMRDSRVLWAGNWERLIS  231 (1012)
T ss_pred             EEEEcccCceeecccCCchhhhccccccCCceEeeecCCcceEEeCCccCCCccccc-cccccchhheeeeccchhhhhh
Confidence            9999999999999999999999999999999999999999999999986 4555555 677653 235667655446665


Q ss_pred             ecCC----CcEEEEEccCCceeeEEeec-cccCceEEEEEecCCCEEEEEeC-CCcEEEEEccc----------------
Q psy17610        227 GGGE----GQVRIWKLTRESQSLQCVLK-EHTSSVSVIQIKSDSKEAMSAST-DGTCVLWDLIK----------------  284 (515)
Q Consensus       227 ~~~d----~~i~iw~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iwd~~~----------------  284 (515)
                      .+.+    ..|++||.+.-.. ...++. ..+..|.---+.||.++++.++. +.++..+.+..                
T Consensus       232 TGF~~~R~reV~~~Dtr~f~~-p~~tleld~stGvLiPl~DpDt~llfLaGKG~~~l~~lE~~d~qPyLs~v~~~tle~~  310 (1012)
T KOG1445|consen  232 TGFTTKRIREVRAYDTRKFGA-PVHTLELDSSTGVLIPLYDPDTRLLFLAGKGTNKLFMLEMQDRQPYLSHVFELTLEEQ  310 (1012)
T ss_pred             cccchhhheeeeeeeccccCC-cceeEEeecccceEeeeecCCCceEEEecCCcceEEEEEecCCCcchhhhhhhcchhh
Confidence            5543    5789999863221 111111 11223333445666655544332 34444443200                


Q ss_pred             --------------------------------------------------------------------------------
Q psy17610        285 --------------------------------------------------------------------------------  284 (515)
Q Consensus       285 --------------------------------------------------------------------------------  284 (515)
                                                                                                      
T Consensus       311 ~~GA~lvpkral~VM~~EV~rvlQLt~~~ivPi~y~VPRksyrdFH~DLfPeT~G~~p~~~ageWlnG~Nq~vqKvSl~P  390 (1012)
T KOG1445|consen  311 TLGATLVPKRALHVMDGEVDRVLQLTKSSIVPIPYIVPRKSYRDFHSDLFPETRGAEPGCTAGEWLNGTNQVVQKVSLAP  390 (1012)
T ss_pred             hccceecchhhhhhcchhhhhheecccCceeecccccchhhhhhhhhhhCccccCCccCcCccceecCccccccccccCc
Confidence                                                                                            


Q ss_pred             ----------------------------------------------------------ceEEEEE-----E---------
Q psy17610        285 ----------------------------------------------------------STRLIIM-----I---------  292 (515)
Q Consensus       285 ----------------------------------------------------------~~~~~~~-----~---------  292 (515)
                                                                                ++..+.+     .         
T Consensus       391 a~r~h~~~pp~~~P~p~~a~t~sf~~v~~ppaaP~~~~n~~~~~~~~Pd~~~qpaV~~~~e~r~l~~~~~E~~~g~~~~~  470 (1012)
T KOG1445|consen  391 AQRSHSPPPPEPVPTPKVAQTPSFVPVPTPPAAPRPMSNNNSSSNNVPDVQEQPAVPKKEEVRELDYRPYEKENGVHTPN  470 (1012)
T ss_pred             hhccCCCCCCCCCCCcccccCCCCccccCCCCCCCccccccccccCCCccccCCCcCcchhhhhhcccccccccCccCCC
Confidence                                                                      0000000     0         


Q ss_pred             ------------------------cCc--cE--------------------------------------------EEE--
Q psy17610        293 ------------------------LPS--MI--------------------------------------------MSA--  300 (515)
Q Consensus       293 ------------------------~~~--~~--------------------------------------------~~~--  300 (515)
                                              .+.  +.                                            .+.  
T Consensus       471 ~dad~~~g~sS~~s~~~~~~~~~~kP~S~plt~~~s~~s~~~P~~~ksvPe~~~~~~g~~~sat~~v~~s~s~r~~s~v~  550 (1012)
T KOG1445|consen  471 ADADSTQGNSSPISTISPEPVTIVKPASTPLTDSVSTPSVVGPAFGKSVPEQPPVNFGKPISATNRVPLSQSVRPKSCVV  550 (1012)
T ss_pred             cccccccCCCCCccccCCCcccccCCCCcccccccccccccCccccccCCCCCCcccCCCccccccccccccccccceee
Confidence                                    000  00                                            000  


Q ss_pred             -----------------------------------EEcCCCcEEE--EEECCCeEEEEeCCCCceE-----EEEecCCCc
Q psy17610        301 -----------------------------------AYHPSEVQLI--TCSTNKMIDYWETCDGSII-----RSLEGSDVA  338 (515)
Q Consensus       301 -----------------------------------~~~~~~~~l~--~~~~~~~i~~~d~~~~~~~-----~~~~~~~~~  338 (515)
                                                         .|+.+...++  ..+..|.|-||+++..-.+     -.+.  ...
T Consensus       551 G~iSKFRH~~Gt~ghks~hi~NLrnln~~~PgEsnGfcan~~rvAVPL~g~gG~iai~el~~PGrLPDgv~p~l~--Ngt  628 (1012)
T KOG1445|consen  551 GQISKFRHVDGTQGHKSAHISNLRNLNTRLPGESNGFCANNKRVAVPLAGSGGVIAIYELNEPGRLPDGVMPGLF--NGT  628 (1012)
T ss_pred             ccchheeeccCccccchhhhhhhhcccccCCCccCceeeccceEEEEecCCCceEEEEEcCCCCCCCcccccccc--cCc
Confidence                                               0000000222  2344677888887653221     1222  226


Q ss_pred             cEEEEEEcC-CCCEEEEEcCCCeEEEEEccCC-------eeeeeccCCCCCeeEEEECC-CCcEEEEEeCCCcEEEEeCC
Q psy17610        339 AVNCVDFVD-DGKYFLTGGADQIVKMWMYREG-------VPCFVGIGHAASITKIKISP-DKKVIVSVSADGGIFLWTFP  409 (515)
Q Consensus       339 ~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~-------~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iw~~~  409 (515)
                      .|+.+.|.| |...||++++||.|++|.+..+       .+-..+..|...|+++.|+| ....|++++.|-+|++||+.
T Consensus       629 ~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~  708 (1012)
T KOG1445|consen  629 LVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLA  708 (1012)
T ss_pred             eeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeehh
Confidence            789999999 7788999999999999998653       34566788999999999999 56789999999999999998


Q ss_pred             CCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCe-eeeeecccccceEE
Q psy17610        410 ELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGS-IIRSLEGSDVAAVN  488 (515)
Q Consensus       410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~-~~~~~~~~~~~~v~  488 (515)
                      ...                    ....+.+|.+.|..++|||+|+.+|+.+.||+|++|+-.+++ ++..-.+....+-.
T Consensus       709 ~~~--------------------~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~pv~Eg~gpvgtRgA  768 (1012)
T KOG1445|consen  709 NAK--------------------LYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSREQPVYEGKGPVGTRGA  768 (1012)
T ss_pred             hhh--------------------hhheeccCcCceeEEEECCCCcceeeeecCceEEEeCCCCCCCccccCCCCccCcce
Confidence            753                    344566788999999999999999999999999999987764 44444444334445


Q ss_pred             EEEEcCCCcEEEEeecCC
Q psy17610        489 CVDFVDDGKYFLTGGADQ  506 (515)
Q Consensus       489 ~~~~s~~~~~l~s~~~dg  506 (515)
                      .+.|.-||++++..+.|.
T Consensus       769 Ri~wacdgr~viv~Gfdk  786 (1012)
T KOG1445|consen  769 RILWACDGRIVIVVGFDK  786 (1012)
T ss_pred             eEEEEecCcEEEEecccc
Confidence            678888999998877764

>KOG0647|consensus

Probab=100.00  E-value=4.5e-31  Score=212.32  Aligned_cols=271  Identities=13%  Similarity=0.245  Sum_probs=223.1

Q ss_pred             CCCcEEEEEEec-CCCEEEEEecCceEEEEECCC-CceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCc
Q psy17610         80 DDSGISSLQYNP-VNNKVFVGTVNCEIFLIDMNS-GFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLN  157 (515)
Q Consensus        80 ~~~~v~~~~~s~-~~~~l~~~~~d~~i~iw~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~  157 (515)
                      -++.|.+++||| ...++++++-||+|++|+++. |....+....|.++|.+++|+.||..+++++.|+.+++||+.++ 
T Consensus        26 P~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~-  104 (347)
T KOG0647|consen   26 PEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASG-  104 (347)
T ss_pred             cccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCC-
Confidence            468899999999 566777899999999999987 45555566679999999999999999999999999999999998 


Q ss_pred             eeEEEEecCeEEEEEEEeeCCC--EEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEE
Q psy17610        158 ELLRISVMNMICACIVFTYDGK--AILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRI  235 (515)
Q Consensus       158 ~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i  235 (515)
                      ++.++..|.++|.++.|-+...  .|++|+.|.+|+.||.+...++.++  .-.+.+.++..-  ..+++++..+..|.+
T Consensus       105 Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~--~LPeRvYa~Dv~--~pm~vVata~r~i~v  180 (347)
T KOG0647|consen  105 QVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATL--QLPERVYAADVL--YPMAVVATAERHIAV  180 (347)
T ss_pred             CeeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeee--eccceeeehhcc--CceeEEEecCCcEEE
Confidence            6677888999999999988765  8999999999999999998888877  345666666654  347888889999999


Q ss_pred             EEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceE--EEEEEcC----------ccEEEEEEc
Q psy17610        236 WKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTR--LIIMILP----------SMIMSAAYH  303 (515)
Q Consensus       236 w~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~--~~~~~~~----------~~~~~~~~~  303 (515)
                      |+++....+.......-.-.+++++..++....+.|+-+|.+.+..+..+.+  -..+..+          ..|.+++|+
T Consensus       181 ynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~Fh  260 (347)
T KOG0647|consen  181 YNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFH  260 (347)
T ss_pred             EEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEee
Confidence            9997554433333333455688999999988899999999999998877522  1222111          247889999


Q ss_pred             CCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEc
Q psy17610        304 PSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGG  356 (515)
Q Consensus       304 ~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~  356 (515)
                      |....|++++.||.+.+||-.....+.+.+.+. .+|+|..|+.+|.++|-+.
T Consensus       261 P~hgtlvTaGsDGtf~FWDkdar~kLk~s~~~~-qpItcc~fn~~G~ifaYA~  312 (347)
T KOG0647|consen  261 PVHGTLVTAGSDGTFSFWDKDARTKLKTSETHP-QPITCCSFNRNGSIFAYAL  312 (347)
T ss_pred             cccceEEEecCCceEEEecchhhhhhhccCcCC-CccceeEecCCCCEEEEEe
Confidence            999999999999999999998888888877766 8999999999999887653

>KOG0283|consensus

Probab=100.00  E-value=1.3e-31  Score=244.87  Aligned_cols=282  Identities=15%  Similarity=0.225  Sum_probs=215.1

Q ss_pred             cCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCcc----------CeEEEEeCC---CCcEEE--EEe
Q psy17610         79 KDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTS----------AIYDLQFPV---NFSSVF--ATC  143 (515)
Q Consensus        79 ~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~----------~v~~~~~~~---~~~~l~--~~~  143 (515)
                      +|.+.|.++.||+||+|||+|+.||.|+||.+...+... ...+..+          .+..+.-++   .++...  .+.
T Consensus       265 ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~-~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~  343 (712)
T KOG0283|consen  265 AHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMR-VAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGS  343 (712)
T ss_pred             ccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhc-ccccccchhhhhhhhccccCcccccccccccccccccccc
Confidence            799999999999999999999999999999987632211 1100000          011111111   000000  111


Q ss_pred             cCCcEEEEeCC----CCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcC
Q psy17610        144 SKNDIRIWSVR----TLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQ  219 (515)
Q Consensus       144 ~d~~i~iw~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  219 (515)
                      .... .+.+..    ..+++..+.+|.+.|..+.|+.++ +|++++.|.+|++|++...+++..+  .|..-|+|++|+|
T Consensus       344 ~s~~-~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~-fLLSSSMDKTVRLWh~~~~~CL~~F--~HndfVTcVaFnP  419 (712)
T KOG0283|consen  344 QSPC-VLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNN-FLLSSSMDKTVRLWHPGRKECLKVF--SHNDFVTCVAFNP  419 (712)
T ss_pred             CCcc-ccCCCccccccccchhhhhccchhheecccccCC-eeEeccccccEEeecCCCcceeeEE--ecCCeeEEEEecc
Confidence            1111 222221    246788899999999999999765 8999999999999999999999998  7999999999999


Q ss_pred             -CCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEc-----
Q psy17610        220 -DGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMIL-----  293 (515)
Q Consensus       220 -~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-----  293 (515)
                       |.+++++|+-||.++||++..  .+.. ....-..-|++++|.|||+..+.|+.+|.+++|+....+.......     
T Consensus       420 vDDryFiSGSLD~KvRiWsI~d--~~Vv-~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~  496 (712)
T KOG0283|consen  420 VDDRYFISGSLDGKVRLWSISD--KKVV-DWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNK  496 (712)
T ss_pred             cCCCcEeecccccceEEeecCc--CeeE-eehhhhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccC
Confidence             889999999999999999943  3333 3333447899999999999999999999999999987765554421     


Q ss_pred             ----CccEEEEEEcCCC-cEEEEEECCCeEEEEeCCCCceEEEEecCCCc-cEEEEEEcCCCCEEEEEcCCCeEEEEEcc
Q psy17610        294 ----PSMIMSAAYHPSE-VQLITCSTNKMIDYWETCDGSIIRSLEGSDVA-AVNCVDFVDDGKYFLTGGADQIVKMWMYR  367 (515)
Q Consensus       294 ----~~~~~~~~~~~~~-~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~~dg~i~i~d~~  367 (515)
                          ...|+.+.+.|.. ..+++.+.|..|+|||.++..++..+++.+.. .-....|+.||++|+++++|..|++|+..
T Consensus       497 Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs~VYiW~~~  576 (712)
T KOG0283|consen  497 KKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSASEDSWVYIWKND  576 (712)
T ss_pred             ccccCceeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhcccccCCcceeeeEccCCCEEEEeecCceEEEEeCC
Confidence                2269999999854 46888999999999999999999999876533 33567899999999999999999999985


Q ss_pred             C
Q psy17610        368 E  368 (515)
Q Consensus       368 ~  368 (515)
                      .
T Consensus       577 ~  577 (712)
T KOG0283|consen  577 S  577 (712)
T ss_pred             C
Confidence            4

>PTZ00421 coronin; Provisional

Probab=100.00  E-value=2.6e-30  Score=239.72  Aligned_cols=265  Identities=12%  Similarity=0.127  Sum_probs=209.0

Q ss_pred             CCcEEEEEEecCCCEEEEEecCceEEEEECCCCcee------------EEeeccCccCeEEEEeCC-CCcEEEEEecCCc
Q psy17610         81 DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTL------------TLVNTCHTSAIYDLQFPV-NFSSVFATCSKND  147 (515)
Q Consensus        81 ~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~------------~~~~~~h~~~v~~~~~~~-~~~~l~~~~~d~~  147 (515)
                      -..|.....++++..+++++.+.....|+...+..+            ...+.+|.++|.+++|+| ++..|++++.|++
T Consensus        20 ~~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~Dgt   99 (493)
T PTZ00421         20 FLNVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDGT   99 (493)
T ss_pred             eeccccccccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCCE
Confidence            345556666667666666666666666665443211            124568999999999999 7889999999999


Q ss_pred             EEEEeCCCC-------ceeEEEEecCeEEEEEEEeeCC-CEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcC
Q psy17610        148 IRIWSVRTL-------NELLRISVMNMICACIVFTYDG-KAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQ  219 (515)
Q Consensus       148 i~iw~~~~~-------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  219 (515)
                      |++||+.++       +++..+.+|...|.+++|+|++ ++|++++.|+.|++||+++++....+ ..|...|.+++|+|
T Consensus       100 IkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l-~~h~~~V~sla~sp  178 (493)
T PTZ00421        100 IMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVI-KCHSDQITSLEWNL  178 (493)
T ss_pred             EEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEE-cCCCCceEEEEEEC
Confidence            999999765       3567788999999999999986 68999999999999999999888777 68999999999999


Q ss_pred             CCCEEEEecCCCcEEEEEccCCceeeEEeeccccCc-eEEEEEecCCCEEEEEe----CCCcEEEEEcccce-EEEEEEc
Q psy17610        220 DGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSS-VSVIQIKSDSKEAMSAS----TDGTCVLWDLIKST-RLIIMIL  293 (515)
Q Consensus       220 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~----~d~~i~iwd~~~~~-~~~~~~~  293 (515)
                      ++.+|++++.|+.|++||+++  ......+.+|.+. ...+.|.+++..+++++    .|+.|++||+++.. +......
T Consensus       179 dG~lLatgs~Dg~IrIwD~rs--g~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~  256 (493)
T PTZ00421        179 DGSLLCTTSKDKKLNIIDPRD--GTIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDL  256 (493)
T ss_pred             CCCEEEEecCCCEEEEEECCC--CcEEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEecc
Confidence            999999999999999999964  3455667778764 34677888888887765    47899999998754 3333222


Q ss_pred             --CccEEEEEEcCCCcEEEEEE-CCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCC
Q psy17610        294 --PSMIMSAAYHPSEVQLITCS-TNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDD  348 (515)
Q Consensus       294 --~~~~~~~~~~~~~~~l~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~  348 (515)
                        ...+....|+++++.+++++ .|+.|++||+.+++...........+...++|.|.
T Consensus       257 d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~~~~~~s~~~~~g~~~~pk  314 (493)
T PTZ00421        257 DQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLTFCSSYSSVEPHKGLCMMPK  314 (493)
T ss_pred             CCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceEEEeeccCCCCCcceEeccc
Confidence              23466677899999998887 59999999999999887766555467788888885

>KOG0294|consensus

Probab=100.00  E-value=1.1e-30  Score=211.34  Aligned_cols=246  Identities=24%  Similarity=0.396  Sum_probs=219.0

Q ss_pred             eeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCC--EEEEecCCCcEEE
Q psy17610        158 ELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGT--RLLSGGGEGQVRI  235 (515)
Q Consensus       158 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~i~i  235 (515)
                      ++..+..|.+.+++++.  ++.++++|+.|-+|++||+........+ ..|.+.|+++.|.+.-.  .|++|+.||.|.+
T Consensus        35 ~lF~~~aH~~sitavAV--s~~~~aSGssDetI~IYDm~k~~qlg~l-l~HagsitaL~F~~~~S~shLlS~sdDG~i~i  111 (362)
T KOG0294|consen   35 PLFAFSAHAGSITALAV--SGPYVASGSSDETIHIYDMRKRKQLGIL-LSHAGSITALKFYPPLSKSHLLSGSDDGHIII  111 (362)
T ss_pred             ccccccccccceeEEEe--cceeEeccCCCCcEEEEeccchhhhcce-eccccceEEEEecCCcchhheeeecCCCcEEE
Confidence            35566789999999998  5889999999999999999998888887 58999999999998654  8999999999999


Q ss_pred             EEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECC
Q psy17610        236 WKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTN  315 (515)
Q Consensus       236 w~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  315 (515)
                      |+.  +.......+++|.+.|+.++.+|.+++.++.+.|+.++.||+-+++.-...........+.|+|.|.+++.+..+
T Consensus       112 w~~--~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~~~at~v~w~~~Gd~F~v~~~~  189 (362)
T KOG0294|consen  112 WRV--GSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLKNKATLVSWSPQGDHFVVSGRN  189 (362)
T ss_pred             EEc--CCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeeccCCcceeeEEcCCCCEEEEEecc
Confidence            999  678999999999999999999999999999999999999999999998888888888889999999999888765


Q ss_pred             CeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEE--CCCCcE
Q psy17610        316 KMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKI--SPDKKV  393 (515)
Q Consensus       316 ~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~--~~~~~~  393 (515)
                       .|-+|.+.+.+....+..+  ..+.|+.|- ++..|++|..|+.|.+||.....+...+.+|...|.++.+  .|++.+
T Consensus       190 -~i~i~q~d~A~v~~~i~~~--~r~l~~~~l-~~~~L~vG~d~~~i~~~D~ds~~~~~~~~AH~~RVK~i~~~~~~~~~~  265 (362)
T KOG0294|consen  190 -KIDIYQLDNASVFREIENP--KRILCATFL-DGSELLVGGDNEWISLKDTDSDTPLTEFLAHENRVKDIASYTNPEHEY  265 (362)
T ss_pred             -EEEEEecccHhHhhhhhcc--ccceeeeec-CCceEEEecCCceEEEeccCCCccceeeecchhheeeeEEEecCCceE
Confidence             5889999888877777655  456677775 4678999999999999999999999999999999999984  467899


Q ss_pred             EEEEeCCCcEEEEeCCCCc
Q psy17610        394 IVSVSADGGIFLWTFPELE  412 (515)
Q Consensus       394 l~~~~~dg~i~iw~~~~~~  412 (515)
                      |++++.||.|++||++...
T Consensus       266 lvTaSSDG~I~vWd~~~~~  284 (362)
T KOG0294|consen  266 LVTASSDGFIKVWDIDMET  284 (362)
T ss_pred             EEEeccCceEEEEEccccc
Confidence            9999999999999998653

>KOG0268|consensus

Probab=100.00  E-value=2.3e-32  Score=225.08  Aligned_cols=285  Identities=18%  Similarity=0.244  Sum_probs=237.7

Q ss_pred             eeccCccCeEEEEeCCCC-cEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCC
Q psy17610        119 VNTCHTSAIYDLQFPVNF-SSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQS  197 (515)
Q Consensus       119 ~~~~h~~~v~~~~~~~~~-~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~  197 (515)
                      .+.||.+.|.+++=+|.. ..+++++.||.|+|||+.+.++...+..|.+.|..+++..  ..+++++.|.+|+.|.++.
T Consensus        61 ~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~--~~~~tvgdDKtvK~wk~~~  138 (433)
T KOG0268|consen   61 SLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ--TSFFTVGDDKTVKQWKIDG  138 (433)
T ss_pred             hccccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc--cceEEecCCcceeeeeccC
Confidence            357899999999999987 6788888999999999999999999999999999999986  5689999999999999776


Q ss_pred             CceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCC-EEEEEeCCCc
Q psy17610        198 GKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSK-EAMSASTDGT  276 (515)
Q Consensus       198 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~  276 (515)
                       .+..++  .....+..+.-+..+..++++++  .|.|||..  ...++..+.-....|.++.|+|-.. .|++++.|+.
T Consensus       139 -~p~~ti--lg~s~~~gIdh~~~~~~FaTcGe--~i~IWD~~--R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrs  211 (433)
T KOG0268|consen  139 -PPLHTI--LGKSVYLGIDHHRKNSVFATCGE--QIDIWDEQ--RDNPVSSMSWGADSISSVKFNPVETSILASCASDRS  211 (433)
T ss_pred             -Ccceee--eccccccccccccccccccccCc--eeeecccc--cCCccceeecCCCceeEEecCCCcchheeeeccCCc
Confidence             345554  23455677777777788998886  49999985  3445666666778899999999755 4566779999


Q ss_pred             EEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEc
Q psy17610        277 CVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGG  356 (515)
Q Consensus       277 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~  356 (515)
                      |.+||+++..++...........++|+|..-.++++.+|..++.||++..+........+.+.+..++|+|.|+-+++|+
T Consensus       212 IvLyD~R~~~Pl~KVi~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~Efvsgs  291 (433)
T KOG0268|consen  212 IVLYDLRQASPLKKVILTMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGS  291 (433)
T ss_pred             eEEEecccCCccceeeeeccccceecCccccceeeccccccceehhhhhhcccchhhcccceeEEEeccCCCcchhcccc
Confidence            99999999999999999999999999998888999999999999999886554444444448999999999999999999


Q ss_pred             CCCeEEEEEccCCeeeeecc-CCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCc
Q psy17610        357 ADQIVKMWMYREGVPCFVGI-GHAASITKIKISPDKKVIVSVSADGGIFLWTFPELE  412 (515)
Q Consensus       357 ~dg~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  412 (515)
                      .|.+|+||..+.+.....+. ..-..|.++.||.|.+++++||.|+.|++|.....+
T Consensus       292 yDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~Ase  348 (433)
T KOG0268|consen  292 YDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKASE  348 (433)
T ss_pred             ccceEEEeecCCCcchhhhhHhhhheeeEEEEeccccEEEecCCCcceeeeecchhh
Confidence            99999999998764433321 122468999999999999999999999999876544

>KOG0308|consensus

Probab=100.00  E-value=9.5e-32  Score=237.90  Aligned_cols=346  Identities=16%  Similarity=0.199  Sum_probs=277.9

Q ss_pred             EEEeC-CCCcEEEEEecCCcEEEEeCCCCc------eeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCC--c
Q psy17610        129 DLQFP-VNFSSVFATCSKNDIRIWSVRTLN------ELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSG--K  199 (515)
Q Consensus       129 ~~~~~-~~~~~l~~~~~d~~i~iw~~~~~~------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~--~  199 (515)
                      .+..+ |.+++|++++.||.|++|++....      .+.+++.|.+.|..+....+++.|++++.|-+|++|+...+  -
T Consensus        29 ~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~~  108 (735)
T KOG0308|consen   29 ALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDNTF  108 (735)
T ss_pred             hccccCCCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCcch
Confidence            44444 456779999999999999987432      25677889999999999999999999999999999999887  3


Q ss_pred             eEEEecCCCCCCeEEEEE-cCCCCEEEEecCCCcEEEEEccCCcee--------eEEeec-cccCceEEEEEecCCCEEE
Q psy17610        200 LKFIIPNAHNRGVTALAI-TQDGTRLLSGGGEGQVRIWKLTRESQS--------LQCVLK-EHTSSVSVIQIKSDSKEAM  269 (515)
Q Consensus       200 ~~~~~~~~~~~~v~~~~~-~~~~~~l~~~~~d~~i~iw~~~~~~~~--------~~~~~~-~~~~~v~~~~~~~~~~~l~  269 (515)
                      +..++ ..|...|.|+++ .++...+++|+-|+.|.+||++.....        ....+. ++..+|.+++.++.+..++
T Consensus       109 c~sti-r~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~iv  187 (735)
T KOG0308|consen  109 CMSTI-RTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIV  187 (735)
T ss_pred             hHhhh-hcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEE
Confidence            55555 789999999999 778889999999999999999754321        122333 8889999999999999999


Q ss_pred             EEeCCCcEEEEEcccceEEEEEEcC-ccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCC
Q psy17610        270 SASTDGTCVLWDLIKSTRLIIMILP-SMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDD  348 (515)
Q Consensus       270 ~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~  348 (515)
                      +|+.++.+++||.++.+.+..+..+ ..|..+..++||..+++++.||+|++||+...+++.++..|. ..+.++..+|+
T Consensus       188 sGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~-e~VWaL~~~~s  266 (735)
T KOG0308|consen  188 SGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYIVHK-EGVWALQSSPS  266 (735)
T ss_pred             ecCcccceEEeccccccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEEecc-CceEEEeeCCC
Confidence            9999999999999998887777654 579999999999999999999999999999999999999888 66999999999


Q ss_pred             CCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecc
Q psy17610        349 GKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRS  428 (515)
Q Consensus       349 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~  428 (515)
                      -..+++|+.||.|..-|+++......+-....+|..+..+...+-+-+++.|+.|+-|.....                 
T Consensus       267 f~~vYsG~rd~~i~~Tdl~n~~~~tlick~daPv~~l~~~~~~~~~WvtTtds~I~rW~~~~~-----------------  329 (735)
T KOG0308|consen  267 FTHVYSGGRDGNIYRTDLRNPAKSTLICKEDAPVLKLHLHEHDNSVWVTTTDSSIKRWKLEPD-----------------  329 (735)
T ss_pred             cceEEecCCCCcEEecccCCchhheEeecCCCchhhhhhccccCCceeeeccccceecCCccc-----------------
Confidence            999999999999999999885443334455677888888865555677889999999976432                 


Q ss_pred             cccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeE
Q psy17610        429 TARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIV  508 (515)
Q Consensus       429 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v  508 (515)
                                        ..+++.+...+ -+.+......+.. ..+-.+++|.  .+|..-+.-.|.++++|-..+|.+
T Consensus       330 ------------------~~l~~s~~~~~-~~T~~~~~~~~~~-~tp~~vi~Gg--~ai~k~~mL~dkRhVlTkDa~gnv  387 (735)
T KOG0308|consen  330 ------------------IALSVSGDLDF-FSTDSNNHSCDLT-NTPDSVIPGG--AAIKKHAMLNDKRHVLTKDAKGNV  387 (735)
T ss_pred             ------------------cccccCCCCCc-ccccCCCcccccc-CCCceeccCc--hhhhhhhhhcCcceEeeecCCCCE
Confidence                              24455555554 3334444555532 2333444443  466666777799999999999999


Q ss_pred             EEEEEeC
Q psy17610        509 KICLYIA  515 (515)
Q Consensus       509 ~iw~~~~  515 (515)
                      .+||.++
T Consensus       388 ~lwDIl~  394 (735)
T KOG0308|consen  388 ALWDILA  394 (735)
T ss_pred             EEEEeee
Confidence            9999874

>KOG2096|consensus

Probab=100.00  E-value=1.7e-30  Score=210.49  Aligned_cols=294  Identities=19%  Similarity=0.291  Sum_probs=221.1

Q ss_pred             CCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeec--cccCceEEEEEecCCCEEEEEe-CCCcEEEEEc
Q psy17610        206 NAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLK--EHTSSVSVIQIKSDSKEAMSAS-TDGTCVLWDL  282 (515)
Q Consensus       206 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~  282 (515)
                      .+|...|++++|+.||+.|++++.|+.|++|+++.-..+....+.  -..+-.+.+.|.||.+-++... ...++++|.+
T Consensus        83 KgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l~vyk~  162 (420)
T KOG2096|consen   83 KGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKLCVYKL  162 (420)
T ss_pred             hccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEEEEEEe
Confidence            689999999999999999999999999999998642221111111  1123457889999988766544 4557899876


Q ss_pred             ccceE---EEE--------E--EcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCC
Q psy17610        283 IKSTR---LII--------M--ILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDG  349 (515)
Q Consensus       283 ~~~~~---~~~--------~--~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~  349 (515)
                      ...+.   ...        +  .+...+..+.....+.++++++.|..|.+|+++ |+.+..+.... ..-...+.||+|
T Consensus       163 ~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq-~~n~~aavSP~G  240 (420)
T KOG2096|consen  163 VKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQ-SSNYDAAVSPDG  240 (420)
T ss_pred             eecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-Cceeeeecccc-ccccceeeCCCC
Confidence            43221   000        0  112246667777788999999999999999998 88888887765 556678999999


Q ss_pred             CEEEEEcCCCeEEEEEccC--------CeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCccc
Q psy17610        350 KYFLTGGADQIVKMWMYRE--------GVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSL  421 (515)
Q Consensus       350 ~~l~~~~~dg~i~i~d~~~--------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~  421 (515)
                      +++++++.--.|++|.+--        -..+..+.+|...|..++|+|+...+++.+.||++++||++-.-...+.+..+
T Consensus       241 RFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~qDpk~L  320 (420)
T KOG2096|consen  241 RFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEAGQDPKIL  320 (420)
T ss_pred             cEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccceEecCCCchHh
Confidence            9999999988999998632        24567789999999999999999999999999999999987543333332222


Q ss_pred             ceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEE
Q psy17610        422 SSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLT  501 (515)
Q Consensus       422 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s  501 (515)
                      ....         ..+....+....+.++|.|+.||... ...+++|..++|+....++..+...|.+++|+++|++++|
T Consensus       321 k~g~---------~pl~aag~~p~RL~lsP~g~~lA~s~-gs~l~~~~se~g~~~~~~e~~h~~~Is~is~~~~g~~~at  390 (420)
T KOG2096|consen  321 KEGS---------APLHAAGSEPVRLELSPSGDSLAVSF-GSDLKVFASEDGKDYPELEDIHSTTISSISYSSDGKYIAT  390 (420)
T ss_pred             hcCC---------cchhhcCCCceEEEeCCCCcEEEeec-CCceEEEEcccCccchhHHHhhcCceeeEEecCCCcEEee
Confidence            2110         11112223345899999999998765 5569999999999988888777799999999999999999


Q ss_pred             eecCCeEEEEE
Q psy17610        502 GGADQIVKICL  512 (515)
Q Consensus       502 ~~~dg~v~iw~  512 (515)
                      ++ |..+++..
T Consensus       391 cG-dr~vrv~~  400 (420)
T KOG2096|consen  391 CG-DRYVRVIR  400 (420)
T ss_pred             ec-ceeeeeec
Confidence            87 66677753

>KOG0973|consensus

Probab=100.00  E-value=7.5e-31  Score=246.33  Aligned_cols=286  Identities=12%  Similarity=0.128  Sum_probs=237.5

Q ss_pred             CCCcEEEEEEecCCCEEEEEe--cCceEEEEECCCC-----------ceeEEeeccCccCeEEEEeCCCCcEEEEEecCC
Q psy17610         80 DDSGISSLQYNPVNNKVFVGT--VNCEIFLIDMNSG-----------FTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKN  146 (515)
Q Consensus        80 ~~~~v~~~~~s~~~~~l~~~~--~d~~i~iw~~~~~-----------~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~  146 (515)
                      ++..|.+++.+|++..+|+|+  .|+.+.||+.+.-           .........|.+.|+|+.|+|||++|++++.|+
T Consensus        12 ~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~   91 (942)
T KOG0973|consen   12 NEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDDR   91 (942)
T ss_pred             CCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCcc
Confidence            456799999999999999999  8999999997531           111223345999999999999999999999999


Q ss_pred             cEEEEeCCC------------------CceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCC
Q psy17610        147 DIRIWSVRT------------------LNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAH  208 (515)
Q Consensus       147 ~i~iw~~~~------------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~  208 (515)
                      .|.||....                  .+....+.+|...|..++|+|++.+|++++.|++|.+||..+.+.+..+ .+|
T Consensus        92 ~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~vl-~~H  170 (942)
T KOG0973|consen   92 LVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLKVL-RGH  170 (942)
T ss_pred             eEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccceeeeee-ecc
Confidence            999999772                  1356778899999999999999999999999999999999999877777 799


Q ss_pred             CCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccc------cCceEEEEEecCCCEEEEEeC----CCcEE
Q psy17610        209 NRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEH------TSSVSVIQIKSDSKEAMSAST----DGTCV  278 (515)
Q Consensus       209 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~----d~~i~  278 (515)
                      ...|..+.|.|-|++|++-+.|++|++|+..  .....+.+.++      ...+..+.|+|||.+|++...    -.++.
T Consensus       171 ~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~--dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~  248 (942)
T KOG0973|consen  171 QSLVKGVSWDPIGKYFASQSDDRTLKVWRTS--DWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIA  248 (942)
T ss_pred             cccccceEECCccCeeeeecCCceEEEEEcc--cceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeE
Confidence            9999999999999999999999999999973  33344443332      335688999999999998643    34677


Q ss_pred             EEEcccceEEEE-EEcCccEEEEEEcCC-----Cc------------EEEEEECCCeEEEEeCCCCceEEEEecCCCccE
Q psy17610        279 LWDLIKSTRLII-MILPSMIMSAAYHPS-----EV------------QLITCSTNKMIDYWETCDGSIIRSLEGSDVAAV  340 (515)
Q Consensus       279 iwd~~~~~~~~~-~~~~~~~~~~~~~~~-----~~------------~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i  340 (515)
                      |.+-.+.+.-.. ..+..++..+.|+|.     .+            .+++|+.|++|.+|.....+++.....-....|
T Consensus       249 IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~lf~~SI  328 (942)
T KOG0973|consen  249 IIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVIHNLFNKSI  328 (942)
T ss_pred             EEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCchhhhhhhhcCce
Confidence            777766664444 456678999999882     11            578899999999999988888877766666889


Q ss_pred             EEEEEcCCCCEEEEEcCCCeEEEEEccC
Q psy17610        341 NCVDFVDDGKYFLTGGADQIVKMWMYRE  368 (515)
Q Consensus       341 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~  368 (515)
                      ..++|+|||..|++++.||+|.++.++.
T Consensus       329 ~DmsWspdG~~LfacS~DGtV~~i~Fee  356 (942)
T KOG0973|consen  329 VDMSWSPDGFSLFACSLDGTVALIHFEE  356 (942)
T ss_pred             eeeeEcCCCCeEEEEecCCeEEEEEcch
Confidence            9999999999999999999999998864

>KOG0289|consensus

Probab=100.00  E-value=2.7e-30  Score=217.82  Aligned_cols=283  Identities=16%  Similarity=0.197  Sum_probs=247.9

Q ss_pred             cCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEe
Q psy17610        125 SAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFII  204 (515)
Q Consensus       125 ~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~  204 (515)
                      ..+.++...|..+.+++++.|..+.++|..+++.+..+.+|...|+.+.|+|+...+++++.|..|++|...........
T Consensus       220 pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~~~~~  299 (506)
T KOG0289|consen  220 PGITALDIIPSSSKILTGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSEPTSS  299 (506)
T ss_pred             CCeeEEeecCCCCcceecCCCCceEEEecchhhhhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccccCcccc
Confidence            35788888887778999999999999999999999999999999999999999999999999999999998877765555


Q ss_pred             cCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEccc
Q psy17610        205 PNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIK  284 (515)
Q Consensus       205 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~  284 (515)
                       ..|..+|+.+..+|.|.||++++.|++..+.|++++.......-....-.+++.+|+|||..|.+|..|+.+++||+.+
T Consensus       300 -~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks  378 (506)
T KOG0289|consen  300 -RPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKS  378 (506)
T ss_pred             -ccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCC
Confidence             7999999999999999999999999999999996554333332222334589999999999999999999999999999


Q ss_pred             ceEEEEEEcC-ccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEE
Q psy17610        285 STRLIIMILP-SMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKM  363 (515)
Q Consensus       285 ~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i  363 (515)
                      +.....+..+ ++|..++|+.+|-+|++++.|+.|++||++..+...++......++.++.|.+.|.+|+.++.+=.|++
T Consensus       379 ~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l~Vy~  458 (506)
T KOG0289|consen  379 QTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAGSDLQVYI  458 (506)
T ss_pred             ccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeeccccccceeEEEcCCCCeEEeecceeEEEE
Confidence            8877777654 589999999999999999999999999999999999988877678999999999999999987766666


Q ss_pred             EEcc--CCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeC
Q psy17610        364 WMYR--EGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTF  408 (515)
Q Consensus       364 ~d~~--~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~  408 (515)
                      ++-.  +...+..+..|.+..+.+.|....+++++++.|..++++.+
T Consensus       459 ~~k~~k~W~~~~~~~~~sg~st~v~Fg~~aq~l~s~smd~~l~~~a~  505 (506)
T KOG0289|consen  459 CKKKTKSWTEIKELADHSGLSTGVRFGEHAQYLASTSMDAILRLYAL  505 (506)
T ss_pred             EecccccceeeehhhhcccccceeeecccceEEeeccchhheEEeec
Confidence            6533  45677788889999999999999999999999999988864

>KOG2096|consensus

Probab=100.00  E-value=1.7e-30  Score=210.55  Aligned_cols=287  Identities=18%  Similarity=0.188  Sum_probs=222.8

Q ss_pred             EEEEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCce-----eEEeeccCccCeEEEEeCCCCcEEEEEec-CC
Q psy17610         73 TALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFT-----LTLVNTCHTSAIYDLQFPVNFSSVFATCS-KN  146 (515)
Q Consensus        73 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~-----~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-d~  146 (515)
                      ..-.+.+|.+.|++++|+.||++||+++.|+.|++|+++.-..     ++...  ..+--+.++|+||.+.++..+. ..
T Consensus        78 ~~~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nv--e~dhpT~V~FapDc~s~vv~~~~g~  155 (420)
T KOG2096|consen   78 NVSVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNV--EYDHPTRVVFAPDCKSVVVSVKRGN  155 (420)
T ss_pred             hhhhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccc--cCCCceEEEECCCcceEEEEEccCC
Confidence            3445779999999999999999999999999999999986211     11111  1234678999999988777776 56


Q ss_pred             cEEEEeCCCCc---eeE---------EEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEE
Q psy17610        147 DIRIWSVRTLN---ELL---------RISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTA  214 (515)
Q Consensus       147 ~i~iw~~~~~~---~~~---------~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~  214 (515)
                      ++++|.+...+   ...         --..|...+..+-...++.+|++++.|..|.+|+++ |+.+..+ ......-+.
T Consensus       156 ~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~i-dtnq~~n~~  233 (420)
T KOG2096|consen  156 KLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSI-DTNQSSNYD  233 (420)
T ss_pred             EEEEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-Cceeeee-ccccccccc
Confidence            79999875322   111         112345566667777788999999999999999998 8888777 455556677


Q ss_pred             EEEcCCCCEEEEecCCCcEEEEEccCC------ceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccc---
Q psy17610        215 LAITQDGTRLLSGGGEGQVRIWKLTRE------SQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKS---  285 (515)
Q Consensus       215 ~~~~~~~~~l~~~~~d~~i~iw~~~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~---  285 (515)
                      .+.+|+|+++++++..-.|++|.+--.      +......+.+|...|..++|+++...+++.+.||++++||..-.   
T Consensus       234 aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~  313 (420)
T KOG2096|consen  234 AAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEA  313 (420)
T ss_pred             eeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccceEec
Confidence            899999999999999999999987321      22345578999999999999999999999999999999997421   


Q ss_pred             ----eEEEEE-----EcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEc
Q psy17610        286 ----TRLIIM-----ILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGG  356 (515)
Q Consensus       286 ----~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~  356 (515)
                          +.++..     ...+....+.++|+++.|+.+. ...+++|..++++....++.-+...|.+++|+++|+++++++
T Consensus       314 ~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~-gs~l~~~~se~g~~~~~~e~~h~~~Is~is~~~~g~~~atcG  392 (420)
T KOG2096|consen  314 GQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSF-GSDLKVFASEDGKDYPELEDIHSTTISSISYSSDGKYIATCG  392 (420)
T ss_pred             CCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeec-CCceEEEEcccCccchhHHHhhcCceeeEEecCCCcEEeeec
Confidence                111111     1123355899999999888764 457999999999999888887779999999999999999988


Q ss_pred             CCCeEEEEE
Q psy17610        357 ADQIVKMWM  365 (515)
Q Consensus       357 ~dg~i~i~d  365 (515)
                       |..++++.
T Consensus       393 -dr~vrv~~  400 (420)
T KOG2096|consen  393 -DRYVRVIR  400 (420)
T ss_pred             -ceeeeeec
Confidence             56788775

>KOG0646|consensus

Probab=100.00  E-value=8.8e-31  Score=223.01  Aligned_cols=305  Identities=22%  Similarity=0.304  Sum_probs=246.9

Q ss_pred             ceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec-CCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEE
Q psy17610        103 CEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS-KNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAI  181 (515)
Q Consensus       103 ~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  181 (515)
                      ..+.+||+.+|..+.....+....-.++..- .+.+++++.. ...+.+|.+...........-.+++.+++-+|+|.+|
T Consensus        18 ~~~~~~dl~TGt~~~~ykg~~~a~~~sl~~l-~~~yllsaq~~rp~l~vw~i~k~~~~~q~~v~Pg~v~al~s~n~G~~l   96 (476)
T KOG0646|consen   18 INCIVWDLRTGTSLLQYKGSYLAQAASLTAL-NNEYLLSAQLKRPLLHVWEILKKDQVVQYIVLPGPVHALASSNLGYFL   96 (476)
T ss_pred             cceeEEecCCCceeEEecCcccccchhhhhh-chhheeeecccCccccccccCchhhhhhhcccccceeeeecCCCceEE
Confidence            5599999999877665544322222222222 1246666665 5679999998766666555677889999999999999


Q ss_pred             EEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEcc-------CCceeeEEeeccccC
Q psy17610        182 LSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLT-------RESQSLQCVLKEHTS  254 (515)
Q Consensus       182 ~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~-------~~~~~~~~~~~~~~~  254 (515)
                      +.|+..|.|++|.+.+|+.+..+ .+|-..|+++.|+.||.+|++|+.||.|.+|.+.       +....+.+.+..|.-
T Consensus        97 ~ag~i~g~lYlWelssG~LL~v~-~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~Htl  175 (476)
T KOG0646|consen   97 LAGTISGNLYLWELSSGILLNVL-SAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTL  175 (476)
T ss_pred             EeecccCcEEEEEeccccHHHHH-HhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcc
Confidence            99989999999999999999888 7999999999999999999999999999999874       234567888999999


Q ss_pred             ceEEEEEecC--CCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCc-----
Q psy17610        255 SVSVIQIKSD--SKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGS-----  327 (515)
Q Consensus       255 ~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~-----  327 (515)
                      +|+.+...+.  ..++++++.|.++++||+..+..+..+..+..+.+++.+|.+..+++|+.+|.|.+.++....     
T Consensus       176 sITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~  255 (476)
T KOG0646|consen  176 SITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTITFPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAG  255 (476)
T ss_pred             eeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEecCCcceeEEEcccccEEEecCCcceEEeeehhcCCccccc
Confidence            9999988764  468999999999999999999999999999999999999999999999999999988764432     


Q ss_pred             -----------eEEEEecCCC-ccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEE
Q psy17610        328 -----------IIRSLEGSDV-AAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIV  395 (515)
Q Consensus       328 -----------~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~  395 (515)
                                 .+..+.++.. ..|+|++++-||.+|++|+.||.++|||+.+.++++++....++|+.+.+.|-.+-.+
T Consensus       256 v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q~iRtl~~~kgpVtnL~i~~~~~~~~  335 (476)
T KOG0646|consen  256 VNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDIYSKQCIRTLQTSKGPVTNLQINPLERGII  335 (476)
T ss_pred             ccccccccccceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEecchHHHHHHHhhhccccceeEeecccccee
Confidence                       3444555552 4899999999999999999999999999999999998877889999999977433333


Q ss_pred             E-EeCCCcEEEEeCC
Q psy17610        396 S-VSADGGIFLWTFP  409 (515)
Q Consensus       396 ~-~~~dg~i~iw~~~  409 (515)
                      . -.....+-.|++.
T Consensus       336 l~~~~~ps~~~~~lk  350 (476)
T KOG0646|consen  336 LFEHKQPSLPNPHLK  350 (476)
T ss_pred             cccccCccCCchHhh
Confidence            3 2233344555543

>KOG0274|consensus

Probab=100.00  E-value=4.6e-30  Score=238.08  Aligned_cols=276  Identities=21%  Similarity=0.342  Sum_probs=244.8

Q ss_pred             CccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEE-EEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceE
Q psy17610        123 HTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLR-ISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLK  201 (515)
Q Consensus       123 h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~  201 (515)
                      +...+.+..|.  ..++++++.+++|++||..++..+.. +.+|.+.|.++++...+..+++|+.|.++++||..+|++.
T Consensus       207 ~~~~~~~~q~~--~~~~~~~s~~~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~  284 (537)
T KOG0274|consen  207 DDHVVLCLQLH--DGFFKSGSDDSTLHLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECT  284 (537)
T ss_pred             Ccchhhhheee--cCeEEecCCCceeEEeecccceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEE
Confidence            56678888888  34899999999999999999999888 9999999999999887889999999999999999999999


Q ss_pred             EEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEE
Q psy17610        202 FIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWD  281 (515)
Q Consensus       202 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd  281 (515)
                      ..+ .+|...+.++...+  ..+++|+.|.+|++|+++  ....+..+.+|.++|.++..+  +.++++|+.|++|++||
T Consensus       285 ~~l-~gh~stv~~~~~~~--~~~~sgs~D~tVkVW~v~--n~~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~  357 (537)
T KOG0274|consen  285 HSL-QGHTSSVRCLTIDP--FLLVSGSRDNTVKVWDVT--NGACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWD  357 (537)
T ss_pred             EEe-cCCCceEEEEEccC--ceEeeccCCceEEEEecc--CcceEEEeccccccEEEEEec--CCEEEEEecCceEEEEE
Confidence            999 69999999988864  478889999999999994  567777888899999999986  78999999999999999


Q ss_pred             cccceEEEEEEcCc-cEEEEEEcCCCcEEEEEECCCeEEEEeCCCC-ceEEEEecCCCccEEEEEEcCCCCEEEEEcCCC
Q psy17610        282 LIKSTRLIIMILPS-MIMSAAYHPSEVQLITCSTNKMIDYWETCDG-SIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQ  359 (515)
Q Consensus       282 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg  359 (515)
                      +.+++++..+..+. .|.++.+.+. ..+++|+.|+.|++||+++. +++..+..+. .-+..+.+  .+++|++++.|+
T Consensus       358 ~~~~~cl~sl~gH~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~-~~v~~l~~--~~~~Lvs~~aD~  433 (537)
T KOG0274|consen  358 PRTGKCLKSLSGHTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRTKRKCIHTLQGHT-SLVSSLLL--RDNFLVSSSADG  433 (537)
T ss_pred             hhhceeeeeecCCcceEEEEEecCc-ceEEeeeeccceEeecCCchhhhhhhhcCCc-cccccccc--ccceeEeccccc
Confidence            99999999987664 7899887766 89999999999999999999 8999998876 55544444  578999999999


Q ss_pred             eEEEEEccCCeeeeeccC-CCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcC
Q psy17610        360 IVKMWMYREGVPCFVGIG-HAASITKIKISPDKKVIVSVSADGGIFLWTFPELED  413 (515)
Q Consensus       360 ~i~i~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~  413 (515)
                      +|++||..+++++..+.+ |...|+.+++.  ...+++++.|+.+++||++....
T Consensus       434 ~Ik~WD~~~~~~~~~~~~~~~~~v~~l~~~--~~~il~s~~~~~~~l~dl~~~~~  486 (537)
T KOG0274|consen  434 TIKLWDAEEGECLRTLEGRHVGGVSALALG--KEEILCSSDDGSVKLWDLRSGTL  486 (537)
T ss_pred             cEEEeecccCceeeeeccCCcccEEEeecC--cceEEEEecCCeeEEEecccCch
Confidence            999999999999999988 67889999886  45788889999999999988753

>KOG0647|consensus

Probab=100.00  E-value=7.3e-30  Score=205.37  Aligned_cols=286  Identities=19%  Similarity=0.302  Sum_probs=229.0

Q ss_pred             EecCCCCCCeEEEEEcC-CCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEE
Q psy17610        203 IIPNAHNRGVTALAITQ-DGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWD  281 (515)
Q Consensus       203 ~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd  281 (515)
                      .+..+....|.+++|+| ...+++.++.|++||+|++.......-.....|.++|.+++|+.||..+++++.|+.+++||
T Consensus        21 ev~~pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wD  100 (347)
T KOG0647|consen   21 EVPNPPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWD  100 (347)
T ss_pred             ecCCCcccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEE
Confidence            34466788899999999 55667799999999999997543333355677999999999999999999999999999999


Q ss_pred             cccceEEEEEEcCccEEEEEEcCCCc--EEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCC
Q psy17610        282 LIKSTRLIIMILPSMIMSAAYHPSEV--QLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQ  359 (515)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg  359 (515)
                      +.+++....-.+..++..+.|-+...  .|++|+.|.+|++||++...++.++..+  ..+.++..-  ..+++++..+.
T Consensus       101 L~S~Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LP--eRvYa~Dv~--~pm~vVata~r  176 (347)
T KOG0647|consen  101 LASGQVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLP--ERVYAADVL--YPMAVVATAER  176 (347)
T ss_pred             ccCCCeeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeecc--ceeeehhcc--CceeEEEecCC
Confidence            99999888888999999999988765  8999999999999999999999999887  566666554  45788899999


Q ss_pred             eEEEEEccCCeeeeec--cCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceee
Q psy17610        360 IVKMWMYREGVPCFVG--IGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLII  437 (515)
Q Consensus       360 ~i~i~d~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  437 (515)
                      .|.+|+++++......  ..-.-.+++++..+|....+.|+-+|.+.+..+.....    ...+.-+..+.......   
T Consensus       177 ~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~----~~nFtFkCHR~~~~~~~---  249 (347)
T KOG0647|consen  177 HIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNP----KDNFTFKCHRSTNSVND---  249 (347)
T ss_pred             cEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCc----cCceeEEEeccCCCCCC---
Confidence            9999999775332211  12344688999999888889999999999998876532    11222222222111000   


Q ss_pred             ecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEe
Q psy17610        438 MILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTG  502 (515)
Q Consensus       438 ~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~  502 (515)
                        .--.|++++|+|.-..|++++.||+..+||-.....++..+.|. .+|++.+|+.+|.++|.+
T Consensus       250 --~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkdar~kLk~s~~~~-qpItcc~fn~~G~ifaYA  311 (347)
T KOG0647|consen  250 --DVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDARTKLKTSETHP-QPITCCSFNRNGSIFAYA  311 (347)
T ss_pred             --ceEEecceEeecccceEEEecCCceEEEecchhhhhhhccCcCC-CccceeEecCCCCEEEEE
Confidence              11248999999999999999999999999988888888888887 999999999999998865

>KOG0300|consensus

Probab=100.00  E-value=9.7e-31  Score=211.94  Aligned_cols=290  Identities=16%  Similarity=0.275  Sum_probs=250.7

Q ss_pred             EEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeC--
Q psy17610         76 YLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSV--  153 (515)
Q Consensus        76 ~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~--  153 (515)
                      .+.+|.+.|..++-....+.+.+++.|.+-+||.+++|..+. .+.||.+.|+++.|++.+..+++++.|++..||..  
T Consensus       143 e~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~-~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av  221 (481)
T KOG0300|consen  143 ELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGACLA-TYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAV  221 (481)
T ss_pred             hhcccccceeeehhhcCCcceeecccccceeEEeecccccee-eecccccceeeEEeccccceEEEccCCcchHHHHHhh
Confidence            356899999999999888899999999999999999986655 56789999999999999999999999999999972  


Q ss_pred             ----CC----------------------------------CceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEec
Q psy17610        154 ----RT----------------------------------LNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTP  195 (515)
Q Consensus       154 ----~~----------------------------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~  195 (515)
                          ..                                  ..++..+.+|...|.+..|...|+.+++++.|.+..+||+
T Consensus       222 ~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDV  301 (481)
T KOG0300|consen  222 NWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDV  301 (481)
T ss_pred             cCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccceeeee
Confidence                11                                  0135567789999999999999999999999999999999


Q ss_pred             CCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCC
Q psy17610        196 QSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDG  275 (515)
Q Consensus       196 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~  275 (515)
                      ++++.+..+ .+|....+.++-+|..+++++.+.|.+.++||++ +....+..+++|...|++..|..+ ..+++++.|.
T Consensus       302 Etge~v~~L-tGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFR-eaI~sV~VFQGHtdtVTS~vF~~d-d~vVSgSDDr  378 (481)
T KOG0300|consen  302 ETGEVVNIL-TGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFR-EAIQSVAVFQGHTDTVTSVVFNTD-DRVVSGSDDR  378 (481)
T ss_pred             ccCceeccc-cCcchhccccccCCcceEEEEeccCceeEeccch-hhcceeeeecccccceeEEEEecC-CceeecCCCc
Confidence            999999888 7999999999999999999999999999999998 566677889999999999999876 4689999999


Q ss_pred             cEEEEEcccce-EEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEE---EEecCCCccEEEEEEcCCC--
Q psy17610        276 TCVLWDLIKST-RLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIR---SLEGSDVAAVNCVDFVDDG--  349 (515)
Q Consensus       276 ~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~---~~~~~~~~~i~~~~~~~~~--  349 (515)
                      +|++||+++.+ ++..+...+++..++.+..+..++.-..+..+++||+...+..+   +-...+...+.|++|..+.  
T Consensus       379 TvKvWdLrNMRsplATIRtdS~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~RlaRlPrtsRqgHrRMV~c~AW~eehp~  458 (481)
T KOG0300|consen  379 TVKVWDLRNMRSPLATIRTDSPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRLARLPRTSRQGHRRMVTCCAWLEEHPA  458 (481)
T ss_pred             eEEEeeeccccCcceeeecCCccceeEeecCCceEEeccCCceEEEEecCCCccccCCcccccccceeeeeeeccccCcc
Confidence            99999999874 67788889999999999999999999999999999997654332   2223344789999998643  


Q ss_pred             CEEEEEcCCCeEEEEEccCC
Q psy17610        350 KYFLTGGADQIVKMWMYREG  369 (515)
Q Consensus       350 ~~l~~~~~dg~i~i~d~~~~  369 (515)
                      .-|++++.|..+.-|.+...
T Consensus       459 cnLftcGFDR~v~gW~in~p  478 (481)
T KOG0300|consen  459 CNLFTCGFDRMVAGWKINTP  478 (481)
T ss_pred             cccccccccceeeeeEeccc
Confidence            34778888999999988653

>PTZ00421 coronin; Provisional

Probab=100.00  E-value=2.4e-29  Score=233.29  Aligned_cols=266  Identities=14%  Similarity=0.134  Sum_probs=208.8

Q ss_pred             CccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCcee-------------EEEEecCeEEEEEEEee-CCCEEEEEeCCC
Q psy17610        123 HTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNEL-------------LRISVMNMICACIVFTY-DGKAILSGWNDG  188 (515)
Q Consensus       123 h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~-------------~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg  188 (515)
                      |-..|.....++++..+++++.+.....|+...+..+             ..+.+|.+.|.+++|+| ++++|++++.|+
T Consensus        19 ~~~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~Dg   98 (493)
T PTZ00421         19 HFLNVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDG   98 (493)
T ss_pred             ceeccccccccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCC
Confidence            3445666666777667777777777777765433222             23678999999999999 888999999999


Q ss_pred             eEEEEecCCCc-------eEEEecCCCCCCeEEEEEcCCC-CEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEE
Q psy17610        189 FIRCFTPQSGK-------LKFIIPNAHNRGVTALAITQDG-TRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQ  260 (515)
Q Consensus       189 ~i~~~~~~~~~-------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~  260 (515)
                      .|++||+.++.       .+..+ .+|...|.+++|+|++ ++|++++.|+.|++||+..  ......+.+|...|.+++
T Consensus        99 tIkIWdi~~~~~~~~~~~~l~~L-~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~t--g~~~~~l~~h~~~V~sla  175 (493)
T PTZ00421         99 TIMGWGIPEEGLTQNISDPIVHL-QGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVER--GKAVEVIKCHSDQITSLE  175 (493)
T ss_pred             EEEEEecCCCccccccCcceEEe-cCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCC--CeEEEEEcCCCCceEEEE
Confidence            99999997653       34455 6899999999999975 6899999999999999953  455667888999999999


Q ss_pred             EecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCc--cEEEEEEcCCCcEEEEEE----CCCeEEEEeCCCCc-eEEEEe
Q psy17610        261 IKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPS--MIMSAAYHPSEVQLITCS----TNKMIDYWETCDGS-IIRSLE  333 (515)
Q Consensus       261 ~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~----~~~~i~~~d~~~~~-~~~~~~  333 (515)
                      |+|++.+|++++.|++|++||+++++.+..+..+.  ....+.|.+++..+++++    .++.|++||+++.. ++....
T Consensus       176 ~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~  255 (493)
T PTZ00421        176 WNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVD  255 (493)
T ss_pred             EECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEec
Confidence            99999999999999999999999998877776543  345678889888877654    47899999998764 333333


Q ss_pred             cCCCccEEEEEEcCCCCEEEEEc-CCCeEEEEEccCCeeeeeccC-CCCCeeEEEECCCC
Q psy17610        334 GSDVAAVNCVDFVDDGKYFLTGG-ADQIVKMWMYREGVPCFVGIG-HAASITKIKISPDK  391 (515)
Q Consensus       334 ~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~-~~~~i~~~~~~~~~  391 (515)
                      .+....+....|++++++|++++ .|+.|++||+.++++...... +..++..++|.|..
T Consensus       256 ~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~~~~~~s~~~~~g~~~~pk~  315 (493)
T PTZ00421        256 LDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLTFCSSYSSVEPHKGLCMMPKW  315 (493)
T ss_pred             cCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceEEEeeccCCCCCcceEecccc
Confidence            33334566678999999999887 499999999999887765433 45678889998853

>KOG0283|consensus

Probab=100.00  E-value=1.3e-30  Score=238.44  Aligned_cols=249  Identities=19%  Similarity=0.292  Sum_probs=202.7

Q ss_pred             EEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCC-------------------------------c-------
Q psy17610        201 KFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRE-------------------------------S-------  242 (515)
Q Consensus       201 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~-------------------------------~-------  242 (515)
                      .+.+..+|.+.|.++.|++||++||+|+.|+.|+||.+...                               .       
T Consensus       259 ~Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~  338 (712)
T KOG0283|consen  259 VQEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSS  338 (712)
T ss_pred             eeccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccc
Confidence            34443489999999999999999999999999999987530                               0       


Q ss_pred             --------------------eeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEE
Q psy17610        243 --------------------QSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAY  302 (515)
Q Consensus       243 --------------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~  302 (515)
                                          .++.+.+.+|.+.|..+.|+.+ ++|++++.|.+|++|++...+++..+.++.-|+|++|
T Consensus       339 ~~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn-~fLLSSSMDKTVRLWh~~~~~CL~~F~HndfVTcVaF  417 (712)
T KOG0283|consen  339 SRKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKN-NFLLSSSMDKTVRLWHPGRKECLKVFSHNDFVTCVAF  417 (712)
T ss_pred             cccccCCccccCCCccccccccchhhhhccchhheecccccC-CeeEeccccccEEeecCCCcceeeEEecCCeeEEEEe
Confidence                                0133456789999999999976 6899999999999999999999999999999999999


Q ss_pred             cC-CCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeecc-----
Q psy17610        303 HP-SEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGI-----  376 (515)
Q Consensus       303 ~~-~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-----  376 (515)
                      +| |.+++++|+-|+.+++|++...+.+.-...+  .-|++++|.|||++.++|+.+|..++|+....+......     
T Consensus       418 nPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~--~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~  495 (712)
T KOG0283|consen  418 NPVDDRYFISGSLDGKVRLWSISDKKVVDWNDLR--DLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHN  495 (712)
T ss_pred             cccCCCcEeecccccceEEeecCcCeeEeehhhh--hhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeecc
Confidence            99 7899999999999999999988887776665  789999999999999999999999999998766544331     


Q ss_pred             ----CCCCCeeEEEECCC-CcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeecc
Q psy17610        377 ----GHAASITKIKISPD-KKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHP  451 (515)
Q Consensus       377 ----~~~~~i~~~~~~~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~  451 (515)
                          .|. .|+.+.|.|. ...+++.+.|..|+|+|......... .+...                 ....-....|+.
T Consensus       496 ~Kk~~~~-rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~K-fKG~~-----------------n~~SQ~~Asfs~  556 (712)
T KOG0283|consen  496 KKKKQGK-RITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHK-FKGFR-----------------NTSSQISASFSS  556 (712)
T ss_pred             CccccCc-eeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhh-hcccc-----------------cCCcceeeeEcc
Confidence                233 7999999983 34577778999999999854321110 00000                 011134568899


Q ss_pred             CCcEEEEeecCCeEEEEecC
Q psy17610        452 SEVQLITCSTNKMIDYWETC  471 (515)
Q Consensus       452 ~~~~l~~~~~dg~v~iwd~~  471 (515)
                      ||++|+++++|..|++|+..
T Consensus       557 Dgk~IVs~seDs~VYiW~~~  576 (712)
T KOG0283|consen  557 DGKHIVSASEDSWVYIWKND  576 (712)
T ss_pred             CCCEEEEeecCceEEEEeCC
Confidence            99999999999999999974

>KOG0641|consensus

Probab=100.00  E-value=3.1e-28  Score=188.01  Aligned_cols=307  Identities=21%  Similarity=0.281  Sum_probs=240.9

Q ss_pred             cceEEEEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEE
Q psy17610         70 AGVTALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIR  149 (515)
Q Consensus        70 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~  149 (515)
                      ..+..+..+.....|.+++|+|.|.+.|+|+...+.+|-....   +.....+|+.++.     |-  .+          
T Consensus        21 ~~f~~i~~l~dsqairav~fhp~g~lyavgsnskt~ric~yp~---l~~~r~~hea~~~-----pp--~v----------   80 (350)
T KOG0641|consen   21 KHFEAINILEDSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPA---LIDLRHAHEAAKQ-----PP--SV----------   80 (350)
T ss_pred             cceEEEEEecchhheeeEEecCCCceEEeccCCceEEEEcccc---ccCcccccccccC-----CC--eE----------
Confidence            3467788888999999999999999999999999999877654   1222234554331     11  00          


Q ss_pred             EEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCce-----EEEecCCCCCCeEEEEEcCC----
Q psy17610        150 IWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKL-----KFIIPNAHNRGVTALAITQD----  220 (515)
Q Consensus       150 iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~-----~~~~~~~~~~~v~~~~~~~~----  220 (515)
                              ..++-+.|.+.|.|.+|+|+|+++++|+.|.+|++.......+     ..++ .-|.+.|..++|..+    
T Consensus        81 --------~~kr~khhkgsiyc~~ws~~geliatgsndk~ik~l~fn~dt~~~~g~dle~-nmhdgtirdl~fld~~~s~  151 (350)
T KOG0641|consen   81 --------LCKRNKHHKGSIYCTAWSPCGELIATGSNDKTIKVLPFNADTCNATGHDLEF-NMHDGTIRDLAFLDDPESG  151 (350)
T ss_pred             --------EeeeccccCccEEEEEecCccCeEEecCCCceEEEEecccccccccCcceee-eecCCceeeeEEecCCCcC
Confidence                    0112234777888999999999999999998888875543322     1123 468999999999653    


Q ss_pred             CCEEEEecC-CCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC-----
Q psy17610        221 GTRLLSGGG-EGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP-----  294 (515)
Q Consensus       221 ~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-----  294 (515)
                      +..|++++. |..|++-|.  +.++..+.+.+|++-|.++ ++-++-.+++|+.|.+|++||++-..++..+...     
T Consensus       152 ~~il~s~gagdc~iy~tdc--~~g~~~~a~sghtghilal-yswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~g  228 (350)
T KOG0641|consen  152 GAILASAGAGDCKIYITDC--GRGQGFHALSGHTGHILAL-YSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGG  228 (350)
T ss_pred             ceEEEecCCCcceEEEeec--CCCCcceeecCCcccEEEE-EEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCC
Confidence            456666553 444555555  6677788899999999876 4557889999999999999999988888776432     


Q ss_pred             ---ccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCC--
Q psy17610        295 ---SMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREG--  369 (515)
Q Consensus       295 ---~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~--  369 (515)
                         +.+.+++..|.|++|++|..|....+||++.+++++.+..+. ..|+|+.|+|...++.+++.|..|++-|++..  
T Consensus       229 lessavaav~vdpsgrll~sg~~dssc~lydirg~r~iq~f~phs-adir~vrfsp~a~yllt~syd~~ikltdlqgdla  307 (350)
T KOG0641|consen  229 LESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRFHPHS-ADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLA  307 (350)
T ss_pred             cccceeEEEEECCCcceeeeccCCCceEEEEeeCCceeeeeCCCc-cceeEEEeCCCceEEEEecccceEEEeecccchh
Confidence               468999999999999999999999999999999999999877 89999999999999999999999999998642  


Q ss_pred             --eeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCC
Q psy17610        370 --VPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFP  409 (515)
Q Consensus       370 --~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~  409 (515)
                        -++.....|...+..+.|+|..-.+++.+.|.++.+|-+.
T Consensus       308 ~el~~~vv~ehkdk~i~~rwh~~d~sfisssadkt~tlwa~~  349 (350)
T KOG0641|consen  308 HELPIMVVAEHKDKAIQCRWHPQDFSFISSSADKTATLWALN  349 (350)
T ss_pred             hcCceEEEEeccCceEEEEecCccceeeeccCcceEEEeccC
Confidence              2344556899999999999999899999999999999764

>KOG0299|consensus

Probab=99.98  E-value=3.2e-30  Score=219.19  Aligned_cols=285  Identities=17%  Similarity=0.233  Sum_probs=238.3

Q ss_pred             EeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeE----E-------------E-EecCeEEEEEEEeeCCC
Q psy17610        118 LVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELL----R-------------I-SVMNMICACIVFTYDGK  179 (515)
Q Consensus       118 ~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~----~-------------~-~~~~~~v~~~~~~~~~~  179 (515)
                      .....|.-++.+++++|++++.++++.+++|.=|++.+++...    +             - ..|...+.+++.++||+
T Consensus       136 ~~~~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgk  215 (479)
T KOG0299|consen  136 RVIGKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGK  215 (479)
T ss_pred             eeeccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCc
Confidence            3455699999999999999999999999999999998876331    0             1 25677899999999999


Q ss_pred             EEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEE
Q psy17610        180 AILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVI  259 (515)
Q Consensus       180 ~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~  259 (515)
                      +|++|+.|..|.||+.++.+.+..+ .+|.+.|.+++|-.....+++++.|+.+++|++  .....+.++.+|.+.|..+
T Consensus       216 ylatgg~d~~v~Iw~~~t~ehv~~~-~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~--~~~s~vetlyGHqd~v~~I  292 (479)
T KOG0299|consen  216 YLATGGRDRHVQIWDCDTLEHVKVF-KGHRGAVSSLAFRKGTSELYSASADRSVKVWSI--DQLSYVETLYGHQDGVLGI  292 (479)
T ss_pred             EEEecCCCceEEEecCcccchhhcc-cccccceeeeeeecCccceeeeecCCceEEEeh--hHhHHHHHHhCCccceeee
Confidence            9999999999999999999999887 799999999999988889999999999999999  4566777889999999999


Q ss_pred             EEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCC--
Q psy17610        260 QIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDV--  337 (515)
Q Consensus       260 ~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~--  337 (515)
                      ....-++.+-+++.|+++++|++.....+....+...+.+++|- +...+++|+.+|.|.+|++...+++......|.  
T Consensus       293 daL~reR~vtVGgrDrT~rlwKi~eesqlifrg~~~sidcv~~I-n~~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv~  371 (479)
T KOG0299|consen  293 DALSRERCVTVGGRDRTVRLWKIPEESQLIFRGGEGSIDCVAFI-NDEHFVSGSDNGSIALWSLLKKKPLFTSRLAHGVI  371 (479)
T ss_pred             chhcccceEEeccccceeEEEeccccceeeeeCCCCCeeeEEEe-cccceeeccCCceEEEeeecccCceeEeecccccc
Confidence            98877777777779999999999665555555555578888875 456789999999999999999999888764331  


Q ss_pred             ---------ccEEEEEEcCCCCEEEEEcCCCeEEEEEccCC----eeeeeccCCCCCeeEEEECCCCcEEEEE-eCCCcE
Q psy17610        338 ---------AAVNCVDFVDDGKYFLTGGADQIVKMWMYREG----VPCFVGIGHAASITKIKISPDKKVIVSV-SADGGI  403 (515)
Q Consensus       338 ---------~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~----~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i  403 (515)
                               ..|++++..|...++++|+.+|.|++|-+..+    .++..+. -.+.|++++|+++|+.+++| +....+
T Consensus       372 ~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~ls-~~GfVNsl~f~~sgk~ivagiGkEhRl  450 (479)
T KOG0299|consen  372 PELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRAINLLYSLS-LVGFVNSLAFSNSGKRIVAGIGKEHRL  450 (479)
T ss_pred             CCccccccccceeeeEecccCceEEecCCCCceEEEEecCCccccceeeecc-cccEEEEEEEccCCCEEEEeccccccc
Confidence                     26889999999999999999999999999887    3444443 66889999999999966655 444444


Q ss_pred             EEEe
Q psy17610        404 FLWT  407 (515)
Q Consensus       404 ~iw~  407 (515)
                      --|-
T Consensus       451 GRW~  454 (479)
T KOG0299|consen  451 GRWW  454 (479)
T ss_pred             ceee
Confidence            4443

>KOG0641|consensus

Probab=99.98  E-value=4.2e-28  Score=187.26  Aligned_cols=291  Identities=16%  Similarity=0.213  Sum_probs=234.4

Q ss_pred             cCeEEEEEEEeeCCCEEEEEeCCCeEEEEe------cCCCc--------eEEEecCCCCCCeEEEEEcCCCCEEEEecCC
Q psy17610        165 MNMICACIVFTYDGKAILSGWNDGFIRCFT------PQSGK--------LKFIIPNAHNRGVTALAITQDGTRLLSGGGE  230 (515)
Q Consensus       165 ~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~------~~~~~--------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  230 (515)
                      ....|.+++|+|.|.+.++|+...++++-.      ++.+.        ....-.+.|.+.|.|.+|+|+|.++++|+.|
T Consensus        31 dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~geliatgsnd  110 (350)
T KOG0641|consen   31 DSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCGELIATGSND  110 (350)
T ss_pred             chhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCccCeEEecCCC
Confidence            456789999999999999999999988763      32221        1222235689999999999999999999999


Q ss_pred             CcEEEEEccCCcee---eEEeeccccCceEEEEEecC----CCEEEEEe-CCCcEEEEEcccceEEEEEEcCccEEEEEE
Q psy17610        231 GQVRIWKLTRESQS---LQCVLKEHTSSVSVIQIKSD----SKEAMSAS-TDGTCVLWDLIKSTRLIIMILPSMIMSAAY  302 (515)
Q Consensus       231 ~~i~iw~~~~~~~~---~~~~~~~~~~~v~~~~~~~~----~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~  302 (515)
                      .+|++...+..+..   ....+..|.+.|..++|..+    +..|++++ .|..|++-|..+++....+..+..-.-.-+
T Consensus       111 k~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~a~sghtghilaly  190 (350)
T KOG0641|consen  111 KTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFHALSGHTGHILALY  190 (350)
T ss_pred             ceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcceeecCCcccEEEEE
Confidence            99999877543322   23456779999999999653    34566554 467788889889988888876654333345


Q ss_pred             cCCCcEEEEEECCCeEEEEeCCCCceEEEEecC------CCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeecc
Q psy17610        303 HPSEVQLITCSTNKMIDYWETCDGSIIRSLEGS------DVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGI  376 (515)
Q Consensus       303 ~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~------~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~  376 (515)
                      +-++-++++|+.|.+|++||++-..++..+...      ....+..++..|.|++|++|-.|....+||++.+++++.+.
T Consensus       191 swn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~r~iq~f~  270 (350)
T KOG0641|consen  191 SWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRFH  270 (350)
T ss_pred             EecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCCceeeeeC
Confidence            667889999999999999999999998887532      23578999999999999999999999999999999999999


Q ss_pred             CCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEE
Q psy17610        377 GHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQL  456 (515)
Q Consensus       377 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l  456 (515)
                      .|...|.++.|+|...++++++.|..|++-|++....     .           .-.......|...+..+.|+|..-.+
T Consensus       271 phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla-----~-----------el~~~vv~ehkdk~i~~rwh~~d~sf  334 (350)
T KOG0641|consen  271 PHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLA-----H-----------ELPIMVVAEHKDKAIQCRWHPQDFSF  334 (350)
T ss_pred             CCccceeEEEeCCCceEEEEecccceEEEeecccchh-----h-----------cCceEEEEeccCceEEEEecCcccee
Confidence            9999999999999999999999999999999875321     0           11223445577788999999999999


Q ss_pred             EEeecCCeEEEEecC
Q psy17610        457 ITCSTNKMIDYWETC  471 (515)
Q Consensus       457 ~~~~~dg~v~iwd~~  471 (515)
                      ++.+.|.++.+|-+.
T Consensus       335 isssadkt~tlwa~~  349 (350)
T KOG0641|consen  335 ISSSADKTATLWALN  349 (350)
T ss_pred             eeccCcceEEEeccC
Confidence            999999999999753

>PTZ00420 coronin; Provisional

Probab=99.97  E-value=2.3e-28  Score=227.48  Aligned_cols=246  Identities=17%  Similarity=0.195  Sum_probs=192.8

Q ss_pred             EecCceEEEEECCCCceeEEeeccCccCeEEEEeCCC-CcEEEEEecCCcEEEEeCCCCc--------eeEEEEecCeEE
Q psy17610         99 GTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVN-FSSVFATCSKNDIRIWSVRTLN--------ELLRISVMNMIC  169 (515)
Q Consensus        99 ~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~~~~~d~~i~iw~~~~~~--------~~~~~~~~~~~v  169 (515)
                      |+.++.|.+|+.... .....+.+|.++|.+++|+|+ +..|++++.|++|+|||+.++.        ++..+.+|...|
T Consensus        50 GG~~gvI~L~~~~r~-~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V  128 (568)
T PTZ00420         50 GGLIGAIRLENQMRK-PPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKI  128 (568)
T ss_pred             CCceeEEEeeecCCC-ceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcE
Confidence            556789999998773 455667889999999999997 6889999999999999998642        344677899999


Q ss_pred             EEEEEeeCCCEE-EEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEe
Q psy17610        170 ACIVFTYDGKAI-LSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCV  248 (515)
Q Consensus       170 ~~~~~~~~~~~l-~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~  248 (515)
                      .+++|+|++..+ ++++.|+.|++||+++++....+  .|...|.+++|+|+|.+|++++.|+.|++||+++  ......
T Consensus       129 ~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i--~~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rs--g~~i~t  204 (568)
T PTZ00420        129 SIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQI--NMPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRK--QEIASS  204 (568)
T ss_pred             EEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEE--ecCCcEEEEEECCCCCEEEEEecCCEEEEEECCC--CcEEEE
Confidence            999999998764 68899999999999999877766  3667899999999999999999999999999964  445567


Q ss_pred             eccccCceEEE-----EEecCCCEEEEEeCCC----cEEEEEccc-ceEEEEEEcCcc---EEEEEEcCCCcEEEEEECC
Q psy17610        249 LKEHTSSVSVI-----QIKSDSKEAMSASTDG----TCVLWDLIK-STRLIIMILPSM---IMSAAYHPSEVQLITCSTN  315 (515)
Q Consensus       249 ~~~~~~~v~~~-----~~~~~~~~l~~~~~d~----~i~iwd~~~-~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~  315 (515)
                      +.+|.+.+...     .|++++.++++++.|+    +|++||++. .+++.....+..   +......+++.++++|..|
T Consensus       205 l~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD  284 (568)
T PTZ00420        205 FHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGD  284 (568)
T ss_pred             EecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEEECC
Confidence            88888765433     3457889999988774    799999985 555555544432   2233334568889999999


Q ss_pred             CeEEEEeCCCCceEEEEecCCCccEEEEEEcCCC
Q psy17610        316 KMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDG  349 (515)
Q Consensus       316 ~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~  349 (515)
                      +.|++|++..+....--......+..+++|.|..
T Consensus       285 ~tIr~~e~~~~~~~~l~~~~s~~p~~g~~f~Pkr  318 (568)
T PTZ00420        285 GNCRYYQHSLGSIRKVNEYKSCSPFRSFGFLPKQ  318 (568)
T ss_pred             CeEEEEEccCCcEEeecccccCCCccceEEcccc
Confidence            9999999987753322222334678889999964

>KOG1036|consensus

Probab=99.97  E-value=6.1e-29  Score=200.89  Aligned_cols=270  Identities=17%  Similarity=0.239  Sum_probs=222.0

Q ss_pred             ccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCce
Q psy17610        121 TCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKL  200 (515)
Q Consensus       121 ~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~  200 (515)
                      ......|.++.|+|.+..|++++-||++++|++...+....+. |..++.+++|.++ ..+++|+.||.|+.+|+.+++.
T Consensus        10 npP~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~~-~~~plL~c~F~d~-~~~~~G~~dg~vr~~Dln~~~~   87 (323)
T KOG1036|consen   10 NPPEDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKFK-HGAPLLDCAFADE-STIVTGGLDGQVRRYDLNTGNE   87 (323)
T ss_pred             CCChhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhhee-cCCceeeeeccCC-ceEEEeccCceEEEEEecCCcc
Confidence            3357789999999999999999999999999999875555554 8889999999874 5699999999999999999887


Q ss_pred             EEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEE
Q psy17610        201 KFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLW  280 (515)
Q Consensus       201 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw  280 (515)
                      ...  ..|..+|.|+.+.+....+++|+.|++|++||.+..  .....+. ....|.++..  .++.|+.|+.+..+.+|
T Consensus        88 ~~i--gth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~--~~~~~~d-~~kkVy~~~v--~g~~LvVg~~~r~v~iy  160 (323)
T KOG1036|consen   88 DQI--GTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNK--VVVGTFD-QGKKVYCMDV--SGNRLVVGTSDRKVLIY  160 (323)
T ss_pred             eee--ccCCCceEEEEeeccCCeEEEcccCccEEEEecccc--ccccccc-cCceEEEEec--cCCEEEEeecCceEEEE
Confidence            654  479999999999998889999999999999998642  2222222 2346776655  56789999999999999


Q ss_pred             EcccceEEEEE---EcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCC----ceEEEEecCC--------CccEEEEEE
Q psy17610        281 DLIKSTRLIIM---ILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDG----SIIRSLEGSD--------VAAVNCVDF  345 (515)
Q Consensus       281 d~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~----~~~~~~~~~~--------~~~i~~~~~  345 (515)
                      |+++.......   ...-++.++++.|++.-+++++-+|.+.+=.+...    +....++.|.        ..+|++++|
T Consensus       161 DLRn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~F  240 (323)
T KOG1036|consen  161 DLRNLDEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAF  240 (323)
T ss_pred             EcccccchhhhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEe
Confidence            99987655533   33447999999999999999999999887555444    3333444432        247999999


Q ss_pred             cCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeC
Q psy17610        346 VDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSA  399 (515)
Q Consensus       346 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~  399 (515)
                      +|-...|++|+.||.|.+||+.+.+.+..+......|.+++|+.+|..||+++.
T Consensus       241 hp~~~tfaTgGsDG~V~~Wd~~~rKrl~q~~~~~~SI~slsfs~dG~~LAia~s  294 (323)
T KOG1036|consen  241 HPIHGTFATGGSDGIVNIWDLFNRKRLKQLAKYETSISSLSFSMDGSLLAIASS  294 (323)
T ss_pred             ccccceEEecCCCceEEEccCcchhhhhhccCCCCceEEEEeccCCCeEEEEec
Confidence            999899999999999999999999999999888888999999999999999864

>KOG0294|consensus

Probab=99.97  E-value=9.8e-29  Score=200.13  Aligned_cols=266  Identities=20%  Similarity=0.274  Sum_probs=224.4

Q ss_pred             EEEEEecCceEEEEECCCCc-------e----eEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEE
Q psy17610         95 KVFVGTVNCEIFLIDMNSGF-------T----LTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRIS  163 (515)
Q Consensus        95 ~l~~~~~d~~i~iw~~~~~~-------~----~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~  163 (515)
                      .+++|+....|.-+++.-..       +    ....+..|.++|++++.+  ++++++++.|.+|+|||+.+..++..+-
T Consensus         3 ~iIvGtYE~~i~Gf~l~~~~~~~~~s~~~~l~~lF~~~aH~~sitavAVs--~~~~aSGssDetI~IYDm~k~~qlg~ll   80 (362)
T KOG0294|consen    3 EIIVGTYEHVILGFKLDPEPKGCTDSVKPTLKPLFAFSAHAGSITALAVS--GPYVASGSSDETIHIYDMRKRKQLGILL   80 (362)
T ss_pred             eEEEeeeeeEEEEEEeccCccccccccceeeeccccccccccceeEEEec--ceeEeccCCCCcEEEEeccchhhhccee
Confidence            36777777777777764311       1    123456799999999996  6799999999999999999999999999


Q ss_pred             ecCeEEEEEEEeeCCC--EEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCC
Q psy17610        164 VMNMICACIVFTYDGK--AILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRE  241 (515)
Q Consensus       164 ~~~~~v~~~~~~~~~~--~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~  241 (515)
                      .|.+.|+++.|.++-.  .|++|+.||.|.+|+...-++...+ .+|.+.|+.++.+|.+++-++.+.|+.+++||+-++
T Consensus        81 ~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~sl-K~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~G  159 (362)
T KOG0294|consen   81 SHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKSL-KAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRG  159 (362)
T ss_pred             ccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEeeee-cccccccceeEecCCCceEEEEcCCceeeeehhhcC
Confidence            9999999999998775  8999999999999999999888888 799999999999999999999999999999999766


Q ss_pred             ceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEE
Q psy17610        242 SQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYW  321 (515)
Q Consensus       242 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~  321 (515)
                      .......+..   .-+.+.|+|.|.+++.+..+ .|-+|.+.+......+..+..+.++.|. ++..+++|..++.|.+|
T Consensus       160 r~a~v~~L~~---~at~v~w~~~Gd~F~v~~~~-~i~i~q~d~A~v~~~i~~~~r~l~~~~l-~~~~L~vG~d~~~i~~~  234 (362)
T KOG0294|consen  160 RVAFVLNLKN---KATLVSWSPQGDHFVVSGRN-KIDIYQLDNASVFREIENPKRILCATFL-DGSELLVGGDNEWISLK  234 (362)
T ss_pred             ccceeeccCC---cceeeEEcCCCCEEEEEecc-EEEEEecccHhHhhhhhccccceeeeec-CCceEEEecCCceEEEe
Confidence            6655555432   22448999999999988876 5899999888777777777667766664 56788899999999999


Q ss_pred             eCCCCceEEEEecCCCccEEEEEE--cCCCCEEEEEcCCCeEEEEEccCC
Q psy17610        322 ETCDGSIIRSLEGSDVAAVNCVDF--VDDGKYFLTGGADQIVKMWMYREG  369 (515)
Q Consensus       322 d~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~~~~~dg~i~i~d~~~~  369 (515)
                      |..+..+...+..|. ..|..+.+  .|++.+|++++.||.|++||++..
T Consensus       235 D~ds~~~~~~~~AH~-~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~  283 (362)
T KOG0294|consen  235 DTDSDTPLTEFLAHE-NRVKDIASYTNPEHEYLVTASSDGFIKVWDIDME  283 (362)
T ss_pred             ccCCCccceeeecch-hheeeeEEEecCCceEEEEeccCceEEEEEcccc
Confidence            999999999998887 88988874  467889999999999999999765

>KOG2055|consensus

Probab=99.97  E-value=3.8e-29  Score=212.67  Aligned_cols=290  Identities=14%  Similarity=0.169  Sum_probs=239.6

Q ss_pred             CCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCC-EEEEEeCCCcEEEEEcccce
Q psy17610        208 HNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSK-EAMSASTDGTCVLWDLIKST  286 (515)
Q Consensus       208 ~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~  286 (515)
                      ..++|+++.|+|....+++++.|+.+++|.++......++.+.-...+|.+.+|.|+|. .+++++....++.||+.+.+
T Consensus       212 s~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak  291 (514)
T KOG2055|consen  212 SHGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAK  291 (514)
T ss_pred             CcCCceEEEecCCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeeccccc
Confidence            45789999999999999999999999999998777777777777788999999999999 88899999999999998876


Q ss_pred             EEEEEEcC----ccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEE
Q psy17610        287 RLIIMILP----SMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVK  362 (515)
Q Consensus       287 ~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~  362 (515)
                      ..+.-...    ..+.....+|++++++..+..|.|.+....+++.+..++..  +.+..++|+.+++.|++.+.+|.|.
T Consensus       292 ~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~Kie--G~v~~~~fsSdsk~l~~~~~~GeV~  369 (514)
T KOG2055|consen  292 VTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFKIE--GVVSDFTFSSDSKELLASGGTGEVY  369 (514)
T ss_pred             cccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheeeec--cEEeeEEEecCCcEEEEEcCCceEE
Confidence            55443322    24778889999999999999999999999999999999876  7899999999999999999999999


Q ss_pred             EEEccCCeeeeeccCCCC-CeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCc
Q psy17610        363 MWMYREGVPCFVGIGHAA-SITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILP  441 (515)
Q Consensus       363 i~d~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  441 (515)
                      +||++...++..+....+ .-++++.++++.+||+|+..|.|.|||..+......+              .....+....
T Consensus       370 v~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~P--------------kPik~~dNLt  435 (514)
T KOG2055|consen  370 VWNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNP--------------KPIKTVDNLT  435 (514)
T ss_pred             EEecCCcceEEEEeecCccceeeeeecCCCceEEeccCcceEEEeccchhhccCCC--------------Cchhhhhhhh
Confidence            999999888877754322 3367888899999999999999999997653321111              1111122233


Q ss_pred             ccEEEeeeccCCcEEEEeec--CCeEEEEecCCCeeeeeecccc--cceEEEEEEcCCCcEEEEeecCCeEEEEEE
Q psy17610        442 SMIMSAAYHPSEVQLITCST--NKMIDYWETCDGSIIRSLEGSD--VAAVNCVDFVDDGKYFLTGGADQIVKICLY  513 (515)
Q Consensus       442 ~~i~~~~~s~~~~~l~~~~~--dg~v~iwd~~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~  513 (515)
                      ..|++++|+||.+.||.++.  ...+++-.+.+......++...  .+.|+|++|||.+.+||.|.++|.|.+|.+
T Consensus       436 t~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~sG~lAvGNe~grv~l~kL  511 (514)
T KOG2055|consen  436 TAITSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPNSGYLAVGNEAGRVHLFKL  511 (514)
T ss_pred             eeeeeeeeCcchhhhhhhhhccccceEEEeccceeeeccCCCCCCcccceEEEEecCCCceEEeecCCCceeeEee
Confidence            55999999999999998874  5679999888877666655432  367999999999999999999999999986

>KOG1036|consensus

Probab=99.97  E-value=7.7e-29  Score=200.30  Aligned_cols=269  Identities=18%  Similarity=0.334  Sum_probs=223.2

Q ss_pred             CCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCcee
Q psy17610         80 DDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNEL  159 (515)
Q Consensus        80 ~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~  159 (515)
                      -...|++|.|+|.++.|++++-||++++||.... .+...+. |..++.+++|.++ ..+++++.||.|+.+|+.++...
T Consensus        12 P~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~-~l~~~~~-~~~plL~c~F~d~-~~~~~G~~dg~vr~~Dln~~~~~   88 (323)
T KOG1036|consen   12 PEDGISSVKFSPSSSDLLVSSWDGSLRLYDVPAN-SLKLKFK-HGAPLLDCAFADE-STIVTGGLDGQVRRYDLNTGNED   88 (323)
T ss_pred             ChhceeeEEEcCcCCcEEEEeccCcEEEEeccch-hhhhhee-cCCceeeeeccCC-ceEEEeccCceEEEEEecCCcce
Confidence            3578999999999999999999999999999984 4444444 9999999999986 68999999999999999987654


Q ss_pred             EEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEcc
Q psy17610        160 LRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLT  239 (515)
Q Consensus       160 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~  239 (515)
                       .+..|..++.|+.+++....+++|+.|++|++||.+.......+  .....|.++...  ++.|++|+.|..+.+||++
T Consensus        89 -~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~--d~~kkVy~~~v~--g~~LvVg~~~r~v~iyDLR  163 (323)
T KOG1036|consen   89 -QIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTF--DQGKKVYCMDVS--GNRLVVGTSDRKVLIYDLR  163 (323)
T ss_pred             -eeccCCCceEEEEeeccCCeEEEcccCccEEEEecccccccccc--ccCceEEEEecc--CCEEEEeecCceEEEEEcc
Confidence             46669999999999998889999999999999999875555544  334478888775  6689999999999999998


Q ss_pred             CCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccc----eEEEEEEcC----------ccEEEEEEcCC
Q psy17610        240 RESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKS----TRLIIMILP----------SMIMSAAYHPS  305 (515)
Q Consensus       240 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~----~~~~~~~~~----------~~~~~~~~~~~  305 (515)
                      .........-....-.+.++++.|++.-++.++-||.|.+=.+...    +....+..+          .+|.+++|+|-
T Consensus       164 n~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~  243 (323)
T KOG1036|consen  164 NLDEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPI  243 (323)
T ss_pred             cccchhhhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEeccc
Confidence            6555554444455667899999999888999999999887666544    222222211          36999999999


Q ss_pred             CcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcC
Q psy17610        306 EVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA  357 (515)
Q Consensus       306 ~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~  357 (515)
                      ...|++|+.||.|.+||+.+.+.+..+.... ..|..++|+.+|..||+++.
T Consensus       244 ~~tfaTgGsDG~V~~Wd~~~rKrl~q~~~~~-~SI~slsfs~dG~~LAia~s  294 (323)
T KOG1036|consen  244 HGTFATGGSDGIVNIWDLFNRKRLKQLAKYE-TSISSLSFSMDGSLLAIASS  294 (323)
T ss_pred             cceEEecCCCceEEEccCcchhhhhhccCCC-CceEEEEeccCCCeEEEEec
Confidence            9999999999999999999999999988774 78999999999999999874

>PTZ00420 coronin; Provisional

Probab=99.97  E-value=1.1e-27  Score=222.89  Aligned_cols=226  Identities=17%  Similarity=0.232  Sum_probs=183.2

Q ss_pred             EeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCC-CCEEEEecCCCcEEEEEccCCce------eeEEeeccccCce
Q psy17610        184 GWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQD-GTRLLSGGGEGQVRIWKLTRESQ------SLQCVLKEHTSSV  256 (515)
Q Consensus       184 ~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iw~~~~~~~------~~~~~~~~~~~~v  256 (515)
                      |+.++.+++|+......+..+ .+|...|.+++|+|+ +.+|++|+.|+.|++||+.....      .....+.+|...|
T Consensus        50 GG~~gvI~L~~~~r~~~v~~L-~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V  128 (568)
T PTZ00420         50 GGLIGAIRLENQMRKPPVIKL-KGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKI  128 (568)
T ss_pred             CCceeEEEeeecCCCceEEEE-cCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcE
Confidence            456788999998877777666 799999999999996 78999999999999999964321      2344678899999


Q ss_pred             EEEEEecCCCEE-EEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecC
Q psy17610        257 SVIQIKSDSKEA-MSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGS  335 (515)
Q Consensus       257 ~~~~~~~~~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~  335 (515)
                      .+++|+|++..+ ++++.|++|++||+++++....+.++..+.+++|+|+|.+|++++.|+.|++||+++++.+.++..|
T Consensus       129 ~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH  208 (568)
T PTZ00420        129 SIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINMPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFHIH  208 (568)
T ss_pred             EEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEecCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEecc
Confidence            999999998765 6889999999999999988777777788999999999999999999999999999999999988887


Q ss_pred             CCccE-----EEEEEcCCCCEEEEEcCCC----eEEEEEccC-Ceeeeecc--CCCCCeeEEEECCCCcEEEEEeCCCcE
Q psy17610        336 DVAAV-----NCVDFVDDGKYFLTGGADQ----IVKMWMYRE-GVPCFVGI--GHAASITKIKISPDKKVIVSVSADGGI  403 (515)
Q Consensus       336 ~~~~i-----~~~~~~~~~~~l~~~~~dg----~i~i~d~~~-~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg~i  403 (515)
                      . +.+     ....|++++.+|++++.++    .|+|||++. .+++....  .+.+.+......+++.++++|+.|+.|
T Consensus       209 ~-g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tI  287 (568)
T PTZ00420        209 D-GGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNC  287 (568)
T ss_pred             c-CCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEEECCCeE
Confidence            6 332     2234568889999877664    799999985 45554432  233444444445678899999999999


Q ss_pred             EEEeCCCC
Q psy17610        404 FLWTFPEL  411 (515)
Q Consensus       404 ~iw~~~~~  411 (515)
                      ++|++...
T Consensus       288 r~~e~~~~  295 (568)
T PTZ00420        288 RYYQHSLG  295 (568)
T ss_pred             EEEEccCC
Confidence            99998653

>KOG1273|consensus

Probab=99.97  E-value=1.3e-28  Score=199.34  Aligned_cols=285  Identities=17%  Similarity=0.235  Sum_probs=223.9

Q ss_pred             eEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEE
Q psy17610        212 VTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIM  291 (515)
Q Consensus       212 v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~  291 (515)
                      ..|+.|++.|.+||+|+.||.|.|||+.  +......+.+|..+|++++|+++|+.|++++.|..+.+||+..+.+++.+
T Consensus        26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~--T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~ri  103 (405)
T KOG1273|consen   26 AECCQFSRWGDYLAVGCANGRVVIYDFD--TFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRI  103 (405)
T ss_pred             cceEEeccCcceeeeeccCCcEEEEEcc--ccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEE
Confidence            6899999999999999999999999994  44566678899999999999999999999999999999999999999999


Q ss_pred             EcCccEEEEEEcCCCcEE-EEEECCCeEEEEeCCCCceEEEEecCC----CccEEEEEEcCCCCEEEEEcCCCeEEEEEc
Q psy17610        292 ILPSMIMSAAYHPSEVQL-ITCSTNKMIDYWETCDGSIIRSLEGSD----VAAVNCVDFVDDGKYFLTGGADQIVKMWMY  366 (515)
Q Consensus       292 ~~~~~~~~~~~~~~~~~l-~~~~~~~~i~~~d~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~  366 (515)
                      ..++++..+.|+|..... ++.-.+..-.+.++..+.. ..+....    .....+..|.+.|+++++|...|.+.++|.
T Consensus       104 rf~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h-~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a  182 (405)
T KOG1273|consen  104 RFDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKH-SVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDA  182 (405)
T ss_pred             EccCccceeeeccccCCeEEEEEecCCcEEEEecCCce-eeccCCCccccccccccccccCCCCEEEEecCcceEEEEec
Confidence            999999999999965433 3333333344444443221 1111111    122334468899999999999999999999


Q ss_pred             cCCeeeeeccCCC-CCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCc-----cCCCcccceeeecccccccceeeecC
Q psy17610        367 REGVPCFVGIGHA-ASITKIKISPDKKVIVSVSADGGIFLWTFPELEDD-----VGDSRSLSSKISRSTARSTRLIIMIL  440 (515)
Q Consensus       367 ~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~  440 (515)
                      .+.+++..++-.. ..|.++.++..|+.|+.-+.|..|+.|+++.....     ......+....              .
T Consensus       183 ~t~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvV--------------N  248 (405)
T KOG1273|consen  183 ETLECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVV--------------N  248 (405)
T ss_pred             chheeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHHHHHHH--------------h
Confidence            9999988877666 78999999999999999999999999998743321     11111111111              1


Q ss_pred             cccEEEeeeccCCcEEEEeec-CCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEEEEEEe
Q psy17610        441 PSMIMSAAYHPSEVQLITCST-NKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLYI  514 (515)
Q Consensus       441 ~~~i~~~~~s~~~~~l~~~~~-dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~  514 (515)
                      ...-.+++||.+|.++++++. ...++||....|.+++.+.|........+.|+|-...+++- ..|.|+||..+
T Consensus       249 k~~Wk~ccfs~dgeYv~a~s~~aHaLYIWE~~~GsLVKILhG~kgE~l~DV~whp~rp~i~si-~sg~v~iw~~~  322 (405)
T KOG1273|consen  249 KLQWKKCCFSGDGEYVCAGSARAHALYIWEKSIGSLVKILHGTKGEELLDVNWHPVRPIIASI-ASGVVYIWAVV  322 (405)
T ss_pred             hhhhhheeecCCccEEEeccccceeEEEEecCCcceeeeecCCchhheeecccccceeeeeec-cCCceEEEEee
Confidence            122457899999999988874 34699999999999999999887788899999998888877 78999999753

>KOG2055|consensus

Probab=99.97  E-value=9.5e-29  Score=210.28  Aligned_cols=289  Identities=12%  Similarity=0.129  Sum_probs=239.3

Q ss_pred             cCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCC--ceEEEecCCCCCCeEEEEEcCCCC-EEEEecCCCcEEEEEccCC
Q psy17610        165 MNMICACIVFTYDGKAILSGWNDGFIRCFTPQSG--KLKFIIPNAHNRGVTALAITQDGT-RLLSGGGEGQVRIWKLTRE  241 (515)
Q Consensus       165 ~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iw~~~~~  241 (515)
                      ..+.|+++.|+|....+++++.|+.+++|.++..  ..+..+ .-...+|.+.+|.|+|. .+++++....++.||+...
T Consensus       212 s~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~-~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~a  290 (514)
T KOG2055|consen  212 SHGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSI-HLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETA  290 (514)
T ss_pred             CcCCceEEEecCCCceEEEecCCCcEEEEEecCccChhheee-eeccCccceeeecCCCceEEEecccceEEEEeecccc
Confidence            3467999999999999999999999999988653  334443 34567899999999998 8999999999999999765


Q ss_pred             ceeeEEeecccc-CceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEE
Q psy17610        242 SQSLQCVLKEHT-SSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDY  320 (515)
Q Consensus       242 ~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~  320 (515)
                      +...+....++. ..+.....++++++++..+..|.|.+....+++.+..+..++.+..++|+.+++.|++.+.+|.|.+
T Consensus       291 k~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~KieG~v~~~~fsSdsk~l~~~~~~GeV~v  370 (514)
T KOG2055|consen  291 KVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFKIEGVVSDFTFSSDSKELLASGGTGEVYV  370 (514)
T ss_pred             ccccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheeeeccEEeeEEEecCCcEEEEEcCCceEEE
Confidence            555555555554 4567888999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccC------CeeeeeccCCCCCeeEEEECCCCcEE
Q psy17610        321 WETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYRE------GVPCFVGIGHAASITKIKISPDKKVI  394 (515)
Q Consensus       321 ~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~------~~~~~~~~~~~~~i~~~~~~~~~~~l  394 (515)
                      ||++...+++.+.....-.-++++.++++.+||+|+..|.|.|||.++      .+++..+..-...|++|+|++|.+.|
T Consensus       371 ~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiL  450 (514)
T KOG2055|consen  371 WNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQIL  450 (514)
T ss_pred             EecCCcceEEEEeecCccceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcchhhh
Confidence            999999999999876545557788889999999999999999999754      46777777778899999999999999


Q ss_pred             EEEeC--CCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecC
Q psy17610        395 VSVSA--DGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETC  471 (515)
Q Consensus       395 ~~~~~--dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~  471 (515)
                      |.+|.  +..+++-.++........+.                 ....-+.+++++|||.+.+||.|..+|.|.+|.+.
T Consensus       451 AiaS~~~knalrLVHvPS~TVFsNfP~-----------------~n~~vg~vtc~aFSP~sG~lAvGNe~grv~l~kL~  512 (514)
T KOG2055|consen  451 AIASRVKKNALRLVHVPSCTVFSNFPT-----------------SNTKVGHVTCMAFSPNSGYLAVGNEAGRVHLFKLH  512 (514)
T ss_pred             hhhhhccccceEEEeccceeeeccCCC-----------------CCCcccceEEEEecCCCceEEeecCCCceeeEeec
Confidence            98876  55788877655321110000                 01122459999999999999999999999999863

>KOG0301|consensus

Probab=99.97  E-value=1.1e-28  Score=220.35  Aligned_cols=277  Identities=15%  Similarity=0.260  Sum_probs=234.9

Q ss_pred             EEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeE-EeeccCccCeEE-EEeCC-CCcEEEEEecCCcEEEE
Q psy17610         75 LYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLT-LVNTCHTSAIYD-LQFPV-NFSSVFATCSKNDIRIW  151 (515)
Q Consensus        75 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~-~~~~~h~~~v~~-~~~~~-~~~~l~~~~~d~~i~iw  151 (515)
                      ..+.+|...|..+++.+ +..++++++||++++|+-..+.-+. ..+.+|.+-|.. +++-+ ++..+++++.|.++.+|
T Consensus         8 ~~l~gH~~DVr~v~~~~-~~~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~v~   86 (745)
T KOG0301|consen    8 HELEGHKSDVRAVAVTD-GVCIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTTIIVF   86 (745)
T ss_pred             EEeccCccchheeEecC-CeEEeecCCCCceeeeeccCcccccceecccCcceeeccceeccccCcceEeecccceEEEE
Confidence            45678999999999875 4479999999999999987644444 456678888877 88875 44569999999999999


Q ss_pred             eCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCC
Q psy17610        152 SVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEG  231 (515)
Q Consensus       152 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~  231 (515)
                      ...+..++..+.+|+..|.++....++. +++|+.|.++++|...  ++...+ .+|+..|.++..-|++ .+++|+.|.
T Consensus        87 ~~~~~~P~~~LkgH~snVC~ls~~~~~~-~iSgSWD~TakvW~~~--~l~~~l-~gH~asVWAv~~l~e~-~~vTgsaDK  161 (745)
T KOG0301|consen   87 KLSQAEPLYTLKGHKSNVCSLSIGEDGT-LISGSWDSTAKVWRIG--ELVYSL-QGHTASVWAVASLPEN-TYVTGSADK  161 (745)
T ss_pred             ecCCCCchhhhhccccceeeeecCCcCc-eEecccccceEEecch--hhhccc-CCcchheeeeeecCCC-cEEeccCcc
Confidence            9999999999999999999999877776 9999999999999754  444445 7999999999999987 799999999


Q ss_pred             cEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEE-EEcCccEEEEEEcCCCcEEE
Q psy17610        232 QVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLII-MILPSMIMSAAYHPSEVQLI  310 (515)
Q Consensus       232 ~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~  310 (515)
                      +|++|.-    .....++.+|.+.|+.+++-++ ..|++++.||.|++|++ +++.+.. ..+..-++++...+++..++
T Consensus       162 tIklWk~----~~~l~tf~gHtD~VRgL~vl~~-~~flScsNDg~Ir~w~~-~ge~l~~~~ghtn~vYsis~~~~~~~Iv  235 (745)
T KOG0301|consen  162 TIKLWKG----GTLLKTFSGHTDCVRGLAVLDD-SHFLSCSNDGSIRLWDL-DGEVLLEMHGHTNFVYSISMALSDGLIV  235 (745)
T ss_pred             eeeeccC----CchhhhhccchhheeeeEEecC-CCeEeecCCceEEEEec-cCceeeeeeccceEEEEEEecCCCCeEE
Confidence            9999974    5667889999999999999887 45899999999999999 5555554 45556899999999999999


Q ss_pred             EEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEcc
Q psy17610        311 TCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYR  367 (515)
Q Consensus       311 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~  367 (515)
                      ++++|+++++|+..  ++.+.+..+. ..++++.+-++|. +++|+.||.|+||...
T Consensus       236 s~gEDrtlriW~~~--e~~q~I~lPt-tsiWsa~~L~NgD-Ivvg~SDG~VrVfT~~  288 (745)
T KOG0301|consen  236 STGEDRTLRIWKKD--ECVQVITLPT-TSIWSAKVLLNGD-IVVGGSDGRVRVFTVD  288 (745)
T ss_pred             EecCCceEEEeecC--ceEEEEecCc-cceEEEEEeeCCC-EEEeccCceEEEEEec
Confidence            99999999999976  7777777665 6899999998887 7788889999999765

>KOG1332|consensus

Probab=99.97  E-value=1e-29  Score=198.28  Aligned_cols=247  Identities=17%  Similarity=0.270  Sum_probs=208.6

Q ss_pred             ecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCc--eeEEeeccCccCeEEEEeCC--CCcEEEEEecCCcEEEEeC
Q psy17610         78 LKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGF--TLTLVNTCHTSAIYDLQFPV--NFSSVFATCSKNDIRIWSV  153 (515)
Q Consensus        78 ~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~h~~~v~~~~~~~--~~~~l~~~~~d~~i~iw~~  153 (515)
                      ..|.+.|..+...-.|++||+++.|++|+|+...++.  .+...+.||.+||..++|..  .|..|++++.||.|.||.-
T Consensus         8 t~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke   87 (299)
T KOG1332|consen    8 TQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKE   87 (299)
T ss_pred             hhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEec
Confidence            3688999998888899999999999999999998654  56778899999999999954  6788888889999999998


Q ss_pred             CCCc--eeEEEEecCeEEEEEEEeeCC--CEEEEEeCCCeEEEEecCCC--ceEEEecCCCCCCeEEEEEcCC---C---
Q psy17610        154 RTLN--ELLRISVMNMICACIVFTYDG--KAILSGWNDGFIRCFTPQSG--KLKFIIPNAHNRGVTALAITQD---G---  221 (515)
Q Consensus       154 ~~~~--~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~dg~i~~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~---~---  221 (515)
                      ++++  .......|...|++++|.|.+  -.|++++.||.|.+.+.++.  -....+...|.-.|++++|.|.   |   
T Consensus        88 ~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~  167 (299)
T KOG1332|consen   88 ENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLV  167 (299)
T ss_pred             CCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCcccc
Confidence            8774  445566899999999999864  58899999999999987654  3444555789999999999985   4   


Q ss_pred             --------CEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCC----CEEEEEeCCCcEEEEEcccc----
Q psy17610        222 --------TRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDS----KEAMSASTDGTCVLWDLIKS----  285 (515)
Q Consensus       222 --------~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~l~~~~~d~~i~iwd~~~~----  285 (515)
                              +.|++|+.|..|+||+.+.........+.+|.+.|+.++|.|.-    .++++++.||++.||..+..    
T Consensus       168 ~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~e~w  247 (299)
T KOG1332|consen  168 DQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEYEPW  247 (299)
T ss_pred             ccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCccCcc
Confidence                    56999999999999999877777778899999999999999964    46999999999999987532    


Q ss_pred             eEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCC
Q psy17610        286 TRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETC  324 (515)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~  324 (515)
                      +.......+..+..+.|++.|+.|++++.|..+.+|.-.
T Consensus       248 k~tll~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~  286 (299)
T KOG1332|consen  248 KKTLLEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWKEN  286 (299)
T ss_pred             cccccccCCcceEEEEEeccccEEEEecCCcEEEEEEeC
Confidence            112222356679999999999999999999999999744

>KOG1445|consensus

Probab=99.97  E-value=4.4e-28  Score=214.41  Aligned_cols=380  Identities=17%  Similarity=0.237  Sum_probs=265.7

Q ss_pred             EEeeccCccCeEEEEeCCCC-cEEEEEecCCcEEEEeCCCCcee------EEEEecCeEEEEEEEeeCCCEEEEEeCCCe
Q psy17610        117 TLVNTCHTSAIYDLQFPVNF-SSVFATCSKNDIRIWSVRTLNEL------LRISVMNMICACIVFTYDGKAILSGWNDGF  189 (515)
Q Consensus       117 ~~~~~~h~~~v~~~~~~~~~-~~l~~~~~d~~i~iw~~~~~~~~------~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  189 (515)
                      .-++.+|.+.|+.+.|+|-. ..|++++.|..|+||.+..+-..      ..+.+.+-.+.++.|+|...-|+..+..|.
T Consensus        72 i~~l~~H~d~VtDl~FspF~D~LLAT~S~D~~VKiW~lp~g~~q~LSape~~~g~~~~~vE~l~fHpTaDgil~s~a~g~  151 (1012)
T KOG1445|consen   72 IGILAAHGDQVTDLGFSPFADELLATCSRDEPVKIWKLPRGHSQKLSAPEIDVGGGNVIVECLRFHPTADGILASGAHGS  151 (1012)
T ss_pred             cceeecccceeeccCccccchhhhhcccCCCeeEEEecCCCcccccCCcceeecCCceEEEEeecccCcCceEEeccCce
Confidence            34677899999999999944 45666667999999999854321      223344557899999998877777778999


Q ss_pred             EEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCc-eEEEEEecCCCEE
Q psy17610        190 IRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSS-VSVIQIKSDSKEA  268 (515)
Q Consensus       190 i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l  268 (515)
                      +++||+.+++....+ .+|...|.++.|+.||..|++++.|.+|+|||.+. ....++...+|.+. =..+.|..+-..|
T Consensus       152 v~i~D~stqk~~~el-~~h~d~vQSa~WseDG~llatscKdkqirifDPRa-~~~piQ~te~H~~~rdsRv~w~Gn~~rl  229 (1012)
T KOG1445|consen  152 VYITDISTQKTAVEL-SGHTDKVQSADWSEDGKLLATSCKDKQIRIFDPRA-SMEPIQTTEGHGGMRDSRVLWAGNWERL  229 (1012)
T ss_pred             EEEEEcccCceeecc-cCCchhhhccccccCCceEeeecCCcceEEeCCcc-CCCccccccccccchhheeeeccchhhh
Confidence            999999999999888 79999999999999999999999999999999874 45556666777653 2346666665677


Q ss_pred             EEEeCC----CcEEEEEcccc-eEEEE--EEcCccEEEEEEcCCCcEEEEEEC-CCeEEEEeCCCCceE-----------
Q psy17610        269 MSASTD----GTCVLWDLIKS-TRLII--MILPSMIMSAAYHPSEVQLITCST-NKMIDYWETCDGSII-----------  329 (515)
Q Consensus       269 ~~~~~d----~~i~iwd~~~~-~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~-~~~i~~~d~~~~~~~-----------  329 (515)
                      ++.+.+    ..|++||.+.. ..+..  +.....+.---+.||.++++.++. +.++..+.+...++.           
T Consensus       230 isTGF~~~R~reV~~~Dtr~f~~p~~tleld~stGvLiPl~DpDt~llfLaGKG~~~l~~lE~~d~qPyLs~v~~~tle~  309 (1012)
T KOG1445|consen  230 ISTGFTTKRIREVRAYDTRKFGAPVHTLELDSSTGVLIPLYDPDTRLLFLAGKGTNKLFMLEMQDRQPYLSHVFELTLEE  309 (1012)
T ss_pred             hhcccchhhheeeeeeeccccCCcceeEEeecccceEeeeecCCCceEEEecCCcceEEEEEecCCCcchhhhhhhcchh
Confidence            776654    57999998753 23333  333345666667777776654443 455555543221100           


Q ss_pred             --------------------------------------------------------------------------EEEe--
Q psy17610        330 --------------------------------------------------------------------------RSLE--  333 (515)
Q Consensus       330 --------------------------------------------------------------------------~~~~--  333 (515)
                                                                                                .+..  
T Consensus       310 ~~~GA~lvpkral~VM~~EV~rvlQLt~~~ivPi~y~VPRksyrdFH~DLfPeT~G~~p~~~ageWlnG~Nq~vqKvSl~  389 (1012)
T KOG1445|consen  310 QTLGATLVPKRALHVMDGEVDRVLQLTKSSIVPIPYIVPRKSYRDFHSDLFPETRGAEPGCTAGEWLNGTNQVVQKVSLA  389 (1012)
T ss_pred             hhccceecchhhhhhcchhhhhheecccCceeecccccchhhhhhhhhhhCccccCCccCcCccceecCccccccccccC
Confidence                                                                                      0000  


Q ss_pred             ----cC-----------------------------------------------------------------------C--
Q psy17610        334 ----GS-----------------------------------------------------------------------D--  336 (515)
Q Consensus       334 ----~~-----------------------------------------------------------------------~--  336 (515)
                          .|                                                                       +  
T Consensus       390 Pa~r~h~~~pp~~~P~p~~a~t~sf~~v~~ppaaP~~~~n~~~~~~~~Pd~~~qpaV~~~~e~r~l~~~~~E~~~g~~~~  469 (1012)
T KOG1445|consen  390 PAQRSHSPPPPEPVPTPKVAQTPSFVPVPTPPAAPRPMSNNNSSSNNVPDVQEQPAVPKKEEVRELDYRPYEKENGVHTP  469 (1012)
T ss_pred             chhccCCCCCCCCCCCcccccCCCCccccCCCCCCCccccccccccCCCccccCCCcCcchhhhhhcccccccccCccCC
Confidence                00                                                                       0  


Q ss_pred             ----------Ccc------------------EE---------------------------------------------E-
Q psy17610        337 ----------VAA------------------VN---------------------------------------------C-  342 (515)
Q Consensus       337 ----------~~~------------------i~---------------------------------------------~-  342 (515)
                                ..+                  .+                                             | 
T Consensus       470 ~~dad~~~g~sS~~s~~~~~~~~~~kP~S~plt~~~s~~s~~~P~~~ksvPe~~~~~~g~~~sat~~v~~s~s~r~~s~v  549 (1012)
T KOG1445|consen  470 NADADSTQGNSSPISTISPEPVTIVKPASTPLTDSVSTPSVVGPAFGKSVPEQPPVNFGKPISATNRVPLSQSVRPKSCV  549 (1012)
T ss_pred             CcccccccCCCCCccccCCCcccccCCCCcccccccccccccCccccccCCCCCCcccCCCcccccccccccccccccee
Confidence                      000                  00                                             0 


Q ss_pred             -----------------------------------EEEcCCCCEEEE--EcCCCeEEEEEccCC-eee-eec--cCCCCC
Q psy17610        343 -----------------------------------VDFVDDGKYFLT--GGADQIVKMWMYREG-VPC-FVG--IGHAAS  381 (515)
Q Consensus       343 -----------------------------------~~~~~~~~~l~~--~~~dg~i~i~d~~~~-~~~-~~~--~~~~~~  381 (515)
                                                         =-|+.+...+|+  .+..|.|.||+++.. ++- ..+  .-....
T Consensus       550 ~G~iSKFRH~~Gt~ghks~hi~NLrnln~~~PgEsnGfcan~~rvAVPL~g~gG~iai~el~~PGrLPDgv~p~l~Ngt~  629 (1012)
T KOG1445|consen  550 VGQISKFRHVDGTQGHKSAHISNLRNLNTRLPGESNGFCANNKRVAVPLAGSGGVIAIYELNEPGRLPDGVMPGLFNGTL  629 (1012)
T ss_pred             eccchheeeccCccccchhhhhhhhcccccCCCccCceeeccceEEEEecCCCceEEEEEcCCCCCCCcccccccccCce
Confidence                                               000000011221  233456666666432 111 011  123456


Q ss_pred             eeEEEECC-CCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccC-CcEEEEe
Q psy17610        382 ITKIKISP-DKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPS-EVQLITC  459 (515)
Q Consensus       382 i~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~  459 (515)
                      |+.+.|.| |...|++++.||.|++|.+........             .......+..|...|+.+.|+|- ...|+++
T Consensus       630 vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~-------------~~tPe~~lt~h~eKI~slRfHPLAadvLa~a  696 (1012)
T KOG1445|consen  630 VTDLHWDPFDDERLAVATDDGQINLWRLTANGLPEN-------------EMTPEKILTIHGEKITSLRFHPLAADVLAVA  696 (1012)
T ss_pred             eeecccCCCChHHeeecccCceEEEEEeccCCCCcc-------------cCCcceeeecccceEEEEEecchhhhHhhhh
Confidence            89999999 788999999999999999876542211             12223345567788999999995 4689999


Q ss_pred             ecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEEEEE
Q psy17610        460 STNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICL  512 (515)
Q Consensus       460 ~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~  512 (515)
                      +.|-+|++||+.+++....+.+|. +.|..++|||||+.+|+.+.||+|++|+
T Consensus       697 syd~Ti~lWDl~~~~~~~~l~gHt-dqIf~~AWSpdGr~~AtVcKDg~~rVy~  748 (1012)
T KOG1445|consen  697 SYDSTIELWDLANAKLYSRLVGHT-DQIFGIAWSPDGRRIATVCKDGTLRVYE  748 (1012)
T ss_pred             hccceeeeeehhhhhhhheeccCc-CceeEEEECCCCcceeeeecCceEEEeC
Confidence            999999999999999999999998 9999999999999999999999999986

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.97  E-value=1.5e-26  Score=208.76  Aligned_cols=286  Identities=11%  Similarity=0.061  Sum_probs=216.6

Q ss_pred             CCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEE-EecCCcEEEEeCCCCceeEEEEecCeEEEE
Q psy17610         93 NNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFA-TCSKNDIRIWSVRTLNELLRISVMNMICAC  171 (515)
Q Consensus        93 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~-~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~  171 (515)
                      ++.+++++.|+.|++||+.+++.+.. +..+. .+.+++|+|+++.+++ ++.++.|++||..+++.+..+..+.. +..
T Consensus         1 ~~~~~s~~~d~~v~~~d~~t~~~~~~-~~~~~-~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~   77 (300)
T TIGR03866         1 EKAYVSNEKDNTISVIDTATLEVTRT-FPVGQ-RPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPD-PEL   77 (300)
T ss_pred             CcEEEEecCCCEEEEEECCCCceEEE-EECCC-CCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCC-ccE
Confidence            35688889999999999998655444 44343 4678999999988754 45689999999999888776665443 467


Q ss_pred             EEEeeCCCEEEEE-eCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCC-cEEEEEccCCceeeEEee
Q psy17610        172 IVFTYDGKAILSG-WNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEG-QVRIWKLTRESQSLQCVL  249 (515)
Q Consensus       172 ~~~~~~~~~l~~~-~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~i~iw~~~~~~~~~~~~~  249 (515)
                      ++|+|+++.++++ ..++.+++||+.+++.+..+.  +...+.+++|+|+++++++++.++ .+.+||....  ......
T Consensus        78 ~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~--~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~--~~~~~~  153 (300)
T TIGR03866        78 FALHPNGKILYIANEDDNLVTVIDIETRKVLAEIP--VGVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTY--EIVDNV  153 (300)
T ss_pred             EEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEee--CCCCcceEEECCCCCEEEEEecCCCeEEEEeCCCC--eEEEEE
Confidence            8999999977655 568999999999988776663  334568899999999999888765 4667787533  222222


Q ss_pred             ccccCceEEEEEecCCCEEEEEe-CCCcEEEEEcccceEEEEEEcCc--------cEEEEEEcCCCcEEEEE-ECCCeEE
Q psy17610        250 KEHTSSVSVIQIKSDSKEAMSAS-TDGTCVLWDLIKSTRLIIMILPS--------MIMSAAYHPSEVQLITC-STNKMID  319 (515)
Q Consensus       250 ~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~--------~~~~~~~~~~~~~l~~~-~~~~~i~  319 (515)
                      . .......++|+|++++++.++ .++.+.+||+++++....+....        ....++++|++++++++ ..++.+.
T Consensus       154 ~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~  232 (300)
T TIGR03866       154 L-VDQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVA  232 (300)
T ss_pred             E-cCCCccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEE
Confidence            2 223457789999999886554 58999999999987766554221        23568899999986554 4567899


Q ss_pred             EEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEE-cCCCeEEEEEccCCeeeeeccCCCCCeeEEEECC
Q psy17610        320 YWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTG-GADQIVKMWMYREGVPCFVGIGHAASITKIKISP  389 (515)
Q Consensus       320 ~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~  389 (515)
                      +||..+++....+...  ..+.+++|+|+|++|+++ ..+|.|.+||+++++.+..+... ...+.++++|
T Consensus       233 v~d~~~~~~~~~~~~~--~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~~~  300 (300)
T TIGR03866       233 VVDAKTYEVLDYLLVG--QRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVIKSIKVG-RLPWGVVVRP  300 (300)
T ss_pred             EEECCCCcEEEEEEeC--CCcceEEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEcc-cccceeEeCC
Confidence            9999998887665433  568899999999999886 46899999999999988888654 5558888875

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG4283|consensus

Probab=99.97  E-value=8.1e-28  Score=193.00  Aligned_cols=290  Identities=18%  Similarity=0.301  Sum_probs=232.5

Q ss_pred             CCCCCCeEEEEEcC-CCCEEEEecCCCcEEEEEccCCcee--------e-----EEeeccccCceEEEEEec-CCCEEEE
Q psy17610        206 NAHNRGVTALAITQ-DGTRLLSGGGEGQVRIWKLTRESQS--------L-----QCVLKEHTSSVSVIQIKS-DSKEAMS  270 (515)
Q Consensus       206 ~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~~~--------~-----~~~~~~~~~~v~~~~~~~-~~~~l~~  270 (515)
                      ..|.+.|+++...+ .|+++++|+.||.|.+||++..+..        .     ...-.+|.-.|..+.|-| |...+.+
T Consensus        40 r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFts  119 (397)
T KOG4283|consen   40 RPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTS  119 (397)
T ss_pred             ccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeec
Confidence            67999999999988 7999999999999999999754311        0     112246888899999988 6667888


Q ss_pred             EeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCC---CcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcC
Q psy17610        271 ASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPS---EVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVD  347 (515)
Q Consensus       271 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~  347 (515)
                      ++.|.++++||..+.+....+..+..|++-+++|-   ..++++|..+-.|++-|+.+|.....+.+|. ..|.++.|+|
T Consensus       120 sSFDhtlKVWDtnTlQ~a~~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr-~~vlaV~Wsp  198 (397)
T KOG4283|consen  120 SSFDHTLKVWDTNTLQEAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHR-DGVLAVEWSP  198 (397)
T ss_pred             ccccceEEEeecccceeeEEeecCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeecccc-CceEEEEecc
Confidence            99999999999999999999999999999999984   3467788889999999999999999999988 8999999999


Q ss_pred             CCCE-EEEEcCCCeEEEEEccCC-eeee--------------eccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCC
Q psy17610        348 DGKY-FLTGGADQIVKMWMYREG-VPCF--------------VGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPEL  411 (515)
Q Consensus       348 ~~~~-l~~~~~dg~i~i~d~~~~-~~~~--------------~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  411 (515)
                      ...+ |++|+.||.+++||++.. .+..              .-..|.+.+..++|+.++.++++++.|..+++|+...+
T Consensus       199 ~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G  278 (397)
T KOG4283|consen  199 SSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNMESG  278 (397)
T ss_pred             CceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccceEEeecccC
Confidence            7665 688999999999999753 1222              23467789999999999999999999999999999888


Q ss_pred             cCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEE
Q psy17610        412 EDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVD  491 (515)
Q Consensus       412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~  491 (515)
                      +....+..+........              .-..+. +.+...++.--.++.+.++++-+|+.+..+..|- ..|.|.+
T Consensus       279 ~ntl~~~g~~~~n~~~~--------------~~~~~~-~~~s~vfv~~p~~~~lall~~~sgs~ir~l~~h~-k~i~c~~  342 (397)
T KOG4283|consen  279 RNTLREFGPIIHNQTTS--------------FAVHIQ-SMDSDVFVLFPNDGSLALLNLLEGSFVRRLSTHL-KRINCAA  342 (397)
T ss_pred             ccccccccccccccccc--------------ceEEEe-ecccceEEEEecCCeEEEEEccCceEEEeeeccc-ceeeEEe
Confidence            75444333222111000              001122 2333344444456889999999999999999995 9999999


Q ss_pred             EcCCCcEEEEeecCCeEEEEE
Q psy17610        492 FVDDGKYFLTGGADQIVKICL  512 (515)
Q Consensus       492 ~s~~~~~l~s~~~dg~v~iw~  512 (515)
                      +.|+-+...++..|+.|..|-
T Consensus       343 ~~~~fq~~~tg~~d~ni~~w~  363 (397)
T KOG4283|consen  343 YRPDFEQCFTGDMNGNIYMWS  363 (397)
T ss_pred             ecCchhhhhccccCCcccccc
Confidence            999999999999999999885

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.97  E-value=1.6e-26  Score=208.56  Aligned_cols=286  Identities=14%  Similarity=0.128  Sum_probs=216.4

Q ss_pred             CEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEE-EEecCCCcEEEEEccCCceeeEEeeccccCceE
Q psy17610        179 KAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRL-LSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVS  257 (515)
Q Consensus       179 ~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~  257 (515)
                      +.+++++.|+.+.+||+.+++....+. .+ ..+..++|+|+++.+ ++++.++.|++||....  .....+..+.. +.
T Consensus         2 ~~~~s~~~d~~v~~~d~~t~~~~~~~~-~~-~~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~--~~~~~~~~~~~-~~   76 (300)
T TIGR03866         2 KAYVSNEKDNTISVIDTATLEVTRTFP-VG-QRPRGITLSKDGKLLYVCASDSDTIQVIDLATG--EVIGTLPSGPD-PE   76 (300)
T ss_pred             cEEEEecCCCEEEEEECCCCceEEEEE-CC-CCCCceEECCCCCEEEEEECCCCeEEEEECCCC--cEEEeccCCCC-cc
Confidence            467888999999999999998887773 33 346789999999876 56778899999998543  33334444433 46


Q ss_pred             EEEEecCCCEEEEE-eCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCC-eEEEEeCCCCceEEEEecC
Q psy17610        258 VIQIKSDSKEAMSA-STDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNK-MIDYWETCDGSIIRSLEGS  335 (515)
Q Consensus       258 ~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~i~~~d~~~~~~~~~~~~~  335 (515)
                      .++++|+++.++++ +.++.+++||+.+.+.+..+.....+..++++|++..++++..++ .+.+||..+++........
T Consensus        77 ~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~  156 (300)
T TIGR03866        77 LFALHPNGKILYIANEDDNLVTVIDIETRKVLAEIPVGVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDNVLVD  156 (300)
T ss_pred             EEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEeeCCCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEEEEcC
Confidence            78899999977655 458999999999888777776666678899999999999888765 5677899888776655433


Q ss_pred             CCccEEEEEEcCCCCEEEEE-cCCCeEEEEEccCCeeeeeccCCC-------CCeeEEEECCCCcEEEEE-eCCCcEEEE
Q psy17610        336 DVAAVNCVDFVDDGKYFLTG-GADQIVKMWMYREGVPCFVGIGHA-------ASITKIKISPDKKVIVSV-SADGGIFLW  406 (515)
Q Consensus       336 ~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~-------~~i~~~~~~~~~~~l~~~-~~dg~i~iw  406 (515)
                        ..+..++|+|++++++++ ..++.|++||+++++.+..+..+.       .....++|+|++++++++ +.++.+.+|
T Consensus       157 --~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~  234 (300)
T TIGR03866       157 --QRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVV  234 (300)
T ss_pred             --CCccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEE
Confidence              345789999999988655 458999999999987766543221       123568899999986554 456789999


Q ss_pred             eCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEee-cCCeEEEEecCCCeeeeeecccccc
Q psy17610        407 TFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCS-TNKMIDYWETCDGSIIRSLEGSDVA  485 (515)
Q Consensus       407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~v~iwd~~~~~~~~~~~~~~~~  485 (515)
                      |+.+.+...                     ...+...+.+++|+|+|++|++++ .+|.|++||+.+++++..++..  .
T Consensus       235 d~~~~~~~~---------------------~~~~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~~~--~  291 (300)
T TIGR03866       235 DAKTYEVLD---------------------YLLVGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVIKSIKVG--R  291 (300)
T ss_pred             ECCCCcEEE---------------------EEEeCCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEcc--c
Confidence            986543110                     001123478899999999998864 6899999999999999988764  5


Q ss_pred             eEEEEEEcC
Q psy17610        486 AVNCVDFVD  494 (515)
Q Consensus       486 ~v~~~~~s~  494 (515)
                      ..+.++|+|
T Consensus       292 ~~~~~~~~~  300 (300)
T TIGR03866       292 LPWGVVVRP  300 (300)
T ss_pred             ccceeEeCC
Confidence            668888875

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG0639|consensus

Probab=99.97  E-value=6.9e-29  Score=213.35  Aligned_cols=282  Identities=21%  Similarity=0.386  Sum_probs=239.7

Q ss_pred             CCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCce-eeEEeec--cccCceEEEEEecCCCEEEEEeCCCcEEEEEcc
Q psy17610        207 AHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQ-SLQCVLK--EHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLI  283 (515)
Q Consensus       207 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~-~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~  283 (515)
                      .|..-|.++.++...+++.+|+. |.|+|||+..... .++..+.  .....|.++...|||+.|++|++-.++.|||+.
T Consensus       417 ~HGEvVcAvtIS~~trhVyTgGk-gcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWDLA  495 (705)
T KOG0639|consen  417 AHGEVVCAVTISNPTRHVYTGGK-GCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLA  495 (705)
T ss_pred             ccCcEEEEEEecCCcceeEecCC-CeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceeeeeecc
Confidence            68888889999999999999887 7899999964322 2222222  245678999999999999999999999999998


Q ss_pred             cceEEEEEEcCc---cEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCe
Q psy17610        284 KSTRLIIMILPS---MIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQI  360 (515)
Q Consensus       284 ~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~  360 (515)
                      ........+...   ..+.++.+||.+..++++.||.|.+||+.+...++.+.++. ..+.|+.+++||..|.+|+-|++
T Consensus       496 apTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGht-DGascIdis~dGtklWTGGlDnt  574 (705)
T KOG0639|consen  496 APTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT-DGASCIDISKDGTKLWTGGLDNT  574 (705)
T ss_pred             CCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCC-CCceeEEecCCCceeecCCCccc
Confidence            876655554443   47889999999999999999999999999999999999988 88999999999999999999999


Q ss_pred             EEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecC
Q psy17610        361 VKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMIL  440 (515)
Q Consensus       361 i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  440 (515)
                      |+.||+++++.+... .....|.++..+|++.+|+.|-.++.+.+-.....                     .+..+..|
T Consensus       575 vRcWDlregrqlqqh-dF~SQIfSLg~cP~~dWlavGMens~vevlh~skp---------------------~kyqlhlh  632 (705)
T KOG0639|consen  575 VRCWDLREGRQLQQH-DFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKP---------------------EKYQLHLH  632 (705)
T ss_pred             eeehhhhhhhhhhhh-hhhhhheecccCCCccceeeecccCcEEEEecCCc---------------------cceeeccc
Confidence            999999998766543 34678999999999999999999999888765443                     23345557


Q ss_pred             cccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEEEEEEe
Q psy17610        441 PSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLYI  514 (515)
Q Consensus       441 ~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~  514 (515)
                      .+-|.++.|++.|+++++.+.|..+..|.+.-|..+...+.  .++|.+..+|.|.++++||+.|....||..+
T Consensus       633 eScVLSlKFa~cGkwfvStGkDnlLnawrtPyGasiFqskE--~SsVlsCDIS~ddkyIVTGSGdkkATVYeV~  704 (705)
T KOG0639|consen  633 ESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKE--SSSVLSCDISFDDKYIVTGSGDKKATVYEVI  704 (705)
T ss_pred             ccEEEEEEecccCceeeecCchhhhhhccCccccceeeccc--cCcceeeeeccCceEEEecCCCcceEEEEEe
Confidence            78899999999999999999999999999988877666654  3799999999999999999999999998765

>KOG4283|consensus

Probab=99.97  E-value=7.2e-28  Score=193.31  Aligned_cols=286  Identities=18%  Similarity=0.277  Sum_probs=226.8

Q ss_pred             EecCCCcEEEEEEec-CCCEEEEEecCceEEEEECCCCce----------eE----EeeccCccCeEEEEeCCCCc-EEE
Q psy17610         77 LLKDDSGISSLQYNP-VNNKVFVGTVNCEIFLIDMNSGFT----------LT----LVNTCHTSAIYDLQFPVNFS-SVF  140 (515)
Q Consensus        77 ~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~iw~~~~~~~----------~~----~~~~~h~~~v~~~~~~~~~~-~l~  140 (515)
                      ...|.+.|+++.+.+ .|+|+++|+.||.|.+||+++...          ..    .-..+|.-.|..+.|-|-.. .+.
T Consensus        39 ~r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFt  118 (397)
T KOG4283|consen   39 VRPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFT  118 (397)
T ss_pred             eccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceee
Confidence            446999999999999 899999999999999999986321          11    11235778999999998544 455


Q ss_pred             EEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCC---CEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEE
Q psy17610        141 ATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDG---KAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAI  217 (515)
Q Consensus       141 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~  217 (515)
                      +++.|.++++||..+.+....++ .++.|.+-+++|-.   .++|+|..+-.|++-|+.+|.....+ .+|...|.++.|
T Consensus       119 ssSFDhtlKVWDtnTlQ~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~L-sGHr~~vlaV~W  196 (397)
T KOG4283|consen  119 SSSFDHTLKVWDTNTLQEAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTL-SGHRDGVLAVEW  196 (397)
T ss_pred             cccccceEEEeecccceeeEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeee-ccccCceEEEEe
Confidence            55559999999999988877776 45678888888843   47788889999999999999999988 799999999999


Q ss_pred             cCCCC-EEEEecCCCcEEEEEccCCcee-------------eEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcc
Q psy17610        218 TQDGT-RLLSGGGEGQVRIWKLTRESQS-------------LQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLI  283 (515)
Q Consensus       218 ~~~~~-~l~~~~~d~~i~iw~~~~~~~~-------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~  283 (515)
                      +|... .|++|+.||.|++||++.....             ....-..|.+.+..++|..++.++++++.|..+++|+..
T Consensus       197 sp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~  276 (397)
T KOG4283|consen  197 SPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNME  276 (397)
T ss_pred             ccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccceEEeecc
Confidence            99766 4679999999999999754221             112234688899999999999999999999999999998


Q ss_pred             cceEEEEEEcC-------ccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEc
Q psy17610        284 KSTRLIIMILP-------SMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGG  356 (515)
Q Consensus       284 ~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~  356 (515)
                      +++....-..+       ..-..+. +-+...++.--.++.+.++++-.++.++.+..+. ..+.|.++.|+-+...+|.
T Consensus       277 ~G~ntl~~~g~~~~n~~~~~~~~~~-~~~s~vfv~~p~~~~lall~~~sgs~ir~l~~h~-k~i~c~~~~~~fq~~~tg~  354 (397)
T KOG4283|consen  277 SGRNTLREFGPIIHNQTTSFAVHIQ-SMDSDVFVLFPNDGSLALLNLLEGSFVRRLSTHL-KRINCAAYRPDFEQCFTGD  354 (397)
T ss_pred             cCcccccccccccccccccceEEEe-ecccceEEEEecCCeEEEEEccCceEEEeeeccc-ceeeEEeecCchhhhhccc
Confidence            87643322111       1111122 3344455555566899999999999999999984 8999999999989999999


Q ss_pred             CCCeEEEEEc
Q psy17610        357 ADQIVKMWMY  366 (515)
Q Consensus       357 ~dg~i~i~d~  366 (515)
                      .|+.+..|-.
T Consensus       355 ~d~ni~~w~p  364 (397)
T KOG4283|consen  355 MNGNIYMWSP  364 (397)
T ss_pred             cCCccccccc
Confidence            9999999976

>KOG0646|consensus

Probab=99.97  E-value=3.9e-28  Score=206.97  Aligned_cols=310  Identities=18%  Similarity=0.279  Sum_probs=235.0

Q ss_pred             CCcEEEEeCCCCceeEEEEec-CeEEEEEEEeeCCCEEEEEe-CCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCC
Q psy17610        145 KNDIRIWSVRTLNELLRISVM-NMICACIVFTYDGKAILSGW-NDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGT  222 (515)
Q Consensus       145 d~~i~iw~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~-~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  222 (515)
                      ..++.+||+++|....++++. ...-.++..- ++.+++++. ....+.+|.+......... .--.++|.+++-+|+|.
T Consensus        17 ~~~~~~~dl~TGt~~~~ykg~~~a~~~sl~~l-~~~yllsaq~~rp~l~vw~i~k~~~~~q~-~v~Pg~v~al~s~n~G~   94 (476)
T KOG0646|consen   17 PINCIVWDLRTGTSLLQYKGSYLAQAASLTAL-NNEYLLSAQLKRPLLHVWEILKKDQVVQY-IVLPGPVHALASSNLGY   94 (476)
T ss_pred             CcceeEEecCCCceeEEecCcccccchhhhhh-chhheeeecccCccccccccCchhhhhhh-cccccceeeeecCCCce
Confidence            355999999999999988865 2222222221 235666554 3457899998765544422 24568899999999999


Q ss_pred             EEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEE
Q psy17610        223 RLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAY  302 (515)
Q Consensus       223 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~  302 (515)
                      +|+.|+..|.+++|.+  .++.+...+.+|-..|+++.|+.|+.+|++++.||.|.+|.+..                  
T Consensus        95 ~l~ag~i~g~lYlWel--ssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~------------------  154 (476)
T KOG0646|consen   95 FLLAGTISGNLYLWEL--SSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTD------------------  154 (476)
T ss_pred             EEEeecccCcEEEEEe--ccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEe------------------
Confidence            9999889999999999  56677778899999999999999999999999999999998632                  


Q ss_pred             cCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCC--CCEEEEEcCCCeEEEEEccCCeeeeeccCCCC
Q psy17610        303 HPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDD--GKYFLTGGADQIVKMWMYREGVPCFVGIGHAA  380 (515)
Q Consensus       303 ~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~  380 (515)
                            ++....++        +-+++..+..|. -+|+.+...+.  ..++++++.|.++++||+..+..+.++ ....
T Consensus       155 ------lv~a~~~~--------~~~p~~~f~~Ht-lsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti-~fp~  218 (476)
T KOG0646|consen  155 ------LVSADNDH--------SVKPLHIFSDHT-LSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTI-TFPS  218 (476)
T ss_pred             ------ecccccCC--------CccceeeeccCc-ceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEE-ecCC
Confidence                  11222221        344555555555 78888877664  457999999999999999999888776 3567


Q ss_pred             CeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcc--cEEEeeeccCCcEEEE
Q psy17610        381 SITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPS--MIMSAAYHPSEVQLIT  458 (515)
Q Consensus       381 ~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~~~~s~~~~~l~~  458 (515)
                      .+.+++.+|-++.++.|+.+|.|.+.++...........    .............+.+|..  .|++++.+-||..|++
T Consensus       219 si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~----~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlS  294 (476)
T KOG0646|consen  219 SIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVN----QKGRHEENTQINVLVGHENESAITCLAISTDGTLLLS  294 (476)
T ss_pred             cceeEEEcccccEEEecCCcceEEeeehhcCCccccccc----ccccccccceeeeeccccCCcceeEEEEecCccEEEe
Confidence            899999999999999999999999988876542211111    1111222334445566766  8999999999999999


Q ss_pred             eecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCc
Q psy17610        459 CSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGK  497 (515)
Q Consensus       459 ~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~  497 (515)
                      |+.||.|.|||+.+.++++++.... ++|+.+.+.|-.+
T Consensus       295 Gd~dg~VcvWdi~S~Q~iRtl~~~k-gpVtnL~i~~~~~  332 (476)
T KOG0646|consen  295 GDEDGKVCVWDIYSKQCIRTLQTSK-GPVTNLQINPLER  332 (476)
T ss_pred             eCCCCCEEEEecchHHHHHHHhhhc-cccceeEeecccc
Confidence            9999999999999999999988544 8999999866433

>KOG0639|consensus

Probab=99.97  E-value=6.5e-29  Score=213.51  Aligned_cols=290  Identities=16%  Similarity=0.259  Sum_probs=246.6

Q ss_pred             cceEEEEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCC--ceeEEeec--cCccCeEEEEeCCCCcEEEEEecC
Q psy17610         70 AGVTALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSG--FTLTLVNT--CHTSAIYDLQFPVNFSSVFATCSK  145 (515)
Q Consensus        70 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~--~~~~~~~~--~h~~~v~~~~~~~~~~~l~~~~~d  145 (515)
                      +...++..+.|..-|.++++|...+++.+|+.. -|+|||+...  +.....+.  .....|.++.+.|||+.|++++.-
T Consensus       408 rharq~~tL~HGEvVcAvtIS~~trhVyTgGkg-cVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGea  486 (705)
T KOG0639|consen  408 RHARQINTLAHGEVVCAVTISNPTRHVYTGGKG-CVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEA  486 (705)
T ss_pred             chHHhhhhhccCcEEEEEEecCCcceeEecCCC-eEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEecccc
Confidence            445567788999999999999999999999865 6999999742  11222111  145678999999999999999999


Q ss_pred             CcEEEEeCCCCceeE--EEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCE
Q psy17610        146 NDIRIWSVRTLNELL--RISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTR  223 (515)
Q Consensus       146 ~~i~iw~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  223 (515)
                      .++.|||+....+..  .+......+.+++.+||.+..+++..||.|.|||+.+...+..+ .+|...+.||.++++|..
T Consensus       487 stlsiWDLAapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~Vrqf-qGhtDGascIdis~dGtk  565 (705)
T KOG0639|consen  487 STLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQF-QGHTDGASCIDISKDGTK  565 (705)
T ss_pred             ceeeeeeccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecc-cCCCCCceeEEecCCCce
Confidence            999999998655433  33333456788999999999999999999999999999999988 799999999999999999


Q ss_pred             EEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEc
Q psy17610        224 LLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYH  303 (515)
Q Consensus       224 l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~  303 (515)
                      |.+|+-|.+|+-||++........   ...+.|.++...|++.+++.|-+++.+.+......+......+.+.|.++.|.
T Consensus       566 lWTGGlDntvRcWDlregrqlqqh---dF~SQIfSLg~cP~~dWlavGMens~vevlh~skp~kyqlhlheScVLSlKFa  642 (705)
T KOG0639|consen  566 LWTGGLDNTVRCWDLREGRQLQQH---DFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPEKYQLHLHESCVLSLKFA  642 (705)
T ss_pred             eecCCCccceeehhhhhhhhhhhh---hhhhhheecccCCCccceeeecccCcEEEEecCCccceeecccccEEEEEEec
Confidence            999999999999999754433332   24578999999999999999999999999998887777777888899999999


Q ss_pred             CCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEc
Q psy17610        304 PSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMY  366 (515)
Q Consensus       304 ~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~  366 (515)
                      +.|+++++.+.|..+..|...-|..+...+..  ..|.++.++.|.+++++|+.|....+|.+
T Consensus       643 ~cGkwfvStGkDnlLnawrtPyGasiFqskE~--SsVlsCDIS~ddkyIVTGSGdkkATVYeV  703 (705)
T KOG0639|consen  643 YCGKWFVSTGKDNLLNAWRTPYGASIFQSKES--SSVLSCDISFDDKYIVTGSGDKKATVYEV  703 (705)
T ss_pred             ccCceeeecCchhhhhhccCccccceeecccc--CcceeeeeccCceEEEecCCCcceEEEEE
Confidence            99999999999999999999999888776654  78999999999999999999988888865

>KOG4328|consensus

Probab=99.97  E-value=3.3e-28  Score=206.80  Aligned_cols=291  Identities=16%  Similarity=0.227  Sum_probs=233.2

Q ss_pred             EecCCCcEEEEEEecCC--CEEEEEecCceEEEEECCC---CceeEEeeccCccCeEEEEeCCCC-cEEEEEecCCcEEE
Q psy17610         77 LLKDDSGISSLQYNPVN--NKVFVGTVNCEIFLIDMNS---GFTLTLVNTCHTSAIYDLQFPVNF-SSVFATCSKNDIRI  150 (515)
Q Consensus        77 ~~~~~~~v~~~~~s~~~--~~l~~~~~d~~i~iw~~~~---~~~~~~~~~~h~~~v~~~~~~~~~-~~l~~~~~d~~i~i  150 (515)
                      ..-+.+.|++++|+|..  +++|+|...|.|-+||+.+   ...-...+..|..+|.++.|+|.. ..+++++.||+|++
T Consensus       182 ~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~  261 (498)
T KOG4328|consen  182 AKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRL  261 (498)
T ss_pred             eEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCceeee
Confidence            34578999999999944  6889999999999999942   223344667799999999999954 68889999999999


Q ss_pred             EeCCCCc--eeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcC-CCCEEEEe
Q psy17610        151 WSVRTLN--ELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQ-DGTRLLSG  227 (515)
Q Consensus       151 w~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~  227 (515)
                      -|++++.  .+..+.........+.|+.+...++.+..-|...+||.+++........-|...|..++++| ...+|+++
T Consensus       262 ~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~  341 (498)
T KOG4328|consen  262 QDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFLATA  341 (498)
T ss_pred             eeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCchheeec
Confidence            9998764  34444435556788889888888888888889999999988775444467889999999999 56689999


Q ss_pred             cCCCcEEEEEccCCceee--EEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEc----ccceEEEEEEcCc------
Q psy17610        228 GGEGQVRIWKLTRESQSL--QCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDL----IKSTRLIIMILPS------  295 (515)
Q Consensus       228 ~~d~~i~iw~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~----~~~~~~~~~~~~~------  295 (515)
                      +.|++.+|||+++-..+.  ......|...|.+..|+|.+..|++.+.|..|++||.    ....+...+.++.      
T Consensus       342 s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~~I~Hn~~t~Rwl  421 (498)
T KOG4328|consen  342 SLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLGTIPHNNRTGRWL  421 (498)
T ss_pred             ccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCceEEeecccccccCCccceeeccCcccccc
Confidence            999999999997543333  3455679999999999999988999999999999998    4455556666554      


Q ss_pred             cEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEE-EEEcCCCC-EEEEEcCCCeEEEEEcc
Q psy17610        296 MIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNC-VDFVDDGK-YFLTGGADQIVKMWMYR  367 (515)
Q Consensus       296 ~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~-~~~~~~~~-~l~~~~~dg~i~i~d~~  367 (515)
                      ......|.|+..+++++..-..|-++|-..++.+.++..+....|.+ ..|+|-+. +++.++..|.|+||--+
T Consensus       422 T~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q~v~el~~P~~~tI~~vn~~HP~~~~~~aG~~s~Gki~vft~k  495 (498)
T KOG4328|consen  422 TPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQMVCELHDPESSTIPSVNEFHPMRDTLAAGGNSSGKIYVFTNK  495 (498)
T ss_pred             cchhheeCCCccEEEEeccCcceeEEcCCCCEEeeeccCccccccccceeecccccceeccCCccceEEEEecC
Confidence            25667899999999999999999999999999888887766545554 47999877 45555667888888543

>KOG1963|consensus

Probab=99.96  E-value=4.1e-26  Score=209.97  Aligned_cols=411  Identities=16%  Similarity=0.178  Sum_probs=291.0

Q ss_pred             EEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCc---EEEEEecCCcEEEEeCCCCceeE
Q psy17610         84 ISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFS---SVFATCSKNDIRIWSVRTLNELL  160 (515)
Q Consensus        84 v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~---~l~~~~~d~~i~iw~~~~~~~~~  160 (515)
                      -..-.||+|+++++....+ .|.||...+|..+. .+.+|..++..+.+.|...   ++++++.+|.|++||...++.++
T Consensus        19 ~~~avfSnD~k~l~~~~~~-~V~VyS~~Tg~~i~-~l~~~~a~l~s~~~~~~~~~~~~~~~~sl~G~I~vwd~~~~~Llk   96 (792)
T KOG1963|consen   19 KSPAVFSNDAKFLFLCTGN-FVKVYSTATGECIT-SLEDHTAPLTSVIVLPSSENANYLIVCSLDGTIRVWDWSDGELLK   96 (792)
T ss_pred             ecccccccCCcEEEEeeCC-EEEEEecchHhhhh-hcccccCccceeeecCCCccceEEEEEecCccEEEecCCCcEEEE
Confidence            3345789999988887655 89999999986665 7888999999999977543   56788889999999999887776


Q ss_pred             EEEecCeE----------------------------------------------------------EEEEEEeeCCCEEE
Q psy17610        161 RISVMNMI----------------------------------------------------------CACIVFTYDGKAIL  182 (515)
Q Consensus       161 ~~~~~~~~----------------------------------------------------------v~~~~~~~~~~~l~  182 (515)
                      .+..+...                                                          -.++.+++.|.+..
T Consensus        97 t~~~~~~v~~~~~~~~~a~~s~~~~~s~~~~~~~~~~s~~~~~q~~~~~~~t~~~~~~d~~~~~~~~~~I~~~~~ge~~~  176 (792)
T KOG1963|consen   97 TFDNNLPVHALVYKPAQADISANVYVSVEDYSILTTFSKKLSKQSSRFVLATFDSAKGDFLKEHQEPKSIVDNNSGEFKG  176 (792)
T ss_pred             EEecCCceeEEEechhHhCccceeEeecccceeeeecccccccceeeeEeeeccccchhhhhhhcCCccEEEcCCceEEE
Confidence            65422110                                                          01222222222222


Q ss_pred             EEeCCCeEEEEecCCCce---EEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccC--CceeeEEeeccccCceE
Q psy17610        183 SGWNDGFIRCFTPQSGKL---KFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTR--ESQSLQCVLKEHTSSVS  257 (515)
Q Consensus       183 ~~~~dg~i~~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~--~~~~~~~~~~~~~~~v~  257 (515)
                      .. .+..+.+|+...+..   .......|...+++.+++|+++++++|..||.|.+|.--.  ........+.-|...|.
T Consensus       177 i~-~~~~~~~~~v~~~~~~~~~~~~~~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~  255 (792)
T KOG1963|consen  177 IV-HMCKIHIYFVPKHTKHTSSRDITVHHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVN  255 (792)
T ss_pred             EE-EeeeEEEEEecccceeeccchhhhhhcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccc
Confidence            22 233456666665431   1112235777799999999999999999999999997532  22333455677899999


Q ss_pred             EEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecC--
Q psy17610        258 VIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGS--  335 (515)
Q Consensus       258 ~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~--  335 (515)
                      +++|+++|.+|++|+.++.+.+|.+.++++...-...+++..+.++||+.+.+....|..|.+....+......+.+.  
T Consensus       256 ~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~  335 (792)
T KOG1963|consen  256 SLSFSSDGAYLLSGGREGVLVLWQLETGKKQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTISGIKP  335 (792)
T ss_pred             eeEEecCCceEeecccceEEEEEeecCCCcccccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhccCccC
Confidence            999999999999999999999999999997666678889999999999999999999999999987666554444322  


Q ss_pred             --------CCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeecc-----------CCCCCeeEEEECCCCcEEEE
Q psy17610        336 --------DVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGI-----------GHAASITKIKISPDKKVIVS  396 (515)
Q Consensus       336 --------~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-----------~~~~~i~~~~~~~~~~~l~~  396 (515)
                              ...-.+.++++|.-+.++..+..|.|.+||+.+.+.+..+.           .+.-.++.++.+..|.+++|
T Consensus       336 ~~~~~k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~~~~~gs~maT  415 (792)
T KOG1963|consen  336 PTPSTKTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVARSRFGSWMAT  415 (792)
T ss_pred             CCccccccccccceeEEEcCCCCceeecCCCceEEEEeccccceeeeEEEEeecccCCcceeEEeeeeehhhccceEEEE
Confidence                    12345678899977778888899999999998876554442           23345778888888999988


Q ss_pred             EeC--------C--CcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeec-cCCc-EEEEeecCCe
Q psy17610        397 VSA--------D--GGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYH-PSEV-QLITCSTNKM  464 (515)
Q Consensus       397 ~~~--------d--g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s-~~~~-~l~~~~~dg~  464 (515)
                      .-.        |  -.+++|-........    .+           ...+...|...+...++. |... .+++++.||.
T Consensus       416 ~E~~~d~~~~~~~e~~LKFW~~n~~~kt~----~L-----------~T~I~~PH~~~~vat~~~~~~rs~~~vta~~dg~  480 (792)
T KOG1963|consen  416 LEARIDKFNFFDGEVSLKFWQYNPNSKTF----IL-----------NTKINNPHGNAFVATIFLNPTRSVRCVTASVDGD  480 (792)
T ss_pred             eeeeehhhhccCceEEEEEEEEcCCccee----EE-----------EEEEecCCCceeEEEEEecCcccceeEEeccCCe
Confidence            742        2  246778655432110    00           111122344434444443 3333 7899999999


Q ss_pred             EEEEecCCCe----------eeeeecccccceEEEEEEcCCCcEEEEeecCCeEEEEEEe
Q psy17610        465 IDYWETCDGS----------IIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLYI  514 (515)
Q Consensus       465 v~iwd~~~~~----------~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~  514 (515)
                      +++|-+.+.+          +...-.-| ..++++++|+.||. +++++.|++|.+|||.
T Consensus       481 ~KiW~~~~~~n~~k~~s~W~c~~i~sy~-k~~i~a~~fs~dGs-lla~s~~~~Itiwd~~  538 (792)
T KOG1963|consen  481 FKIWVFTDDSNIYKKSSNWTCKAIGSYH-KTPITALCFSQDGS-LLAVSFDDTITIWDYD  538 (792)
T ss_pred             EEEEEEecccccCcCccceEEeeeeccc-cCcccchhhcCCCc-EEEEecCCEEEEecCC
Confidence            9999884322          11111123 38899999999996 5567788999999985

>KOG1273|consensus

Probab=99.96  E-value=3.1e-27  Score=191.48  Aligned_cols=279  Identities=11%  Similarity=0.202  Sum_probs=218.4

Q ss_pred             EEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEE
Q psy17610         84 ISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRIS  163 (515)
Q Consensus        84 v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~  163 (515)
                      -.|+.|++.|.+||+|+.||.|.|||+.+ ..+..++.+|..+|++++||+||+.|++++.|..|.+||+..|.+++++.
T Consensus        26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T-~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rir  104 (405)
T KOG1273|consen   26 AECCQFSRWGDYLAVGCANGRVVIYDFDT-FRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIR  104 (405)
T ss_pred             cceEEeccCcceeeeeccCCcEEEEEccc-cchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEE
Confidence            78999999999999999999999999999 67888999999999999999999999999999999999999999998887


Q ss_pred             ecCeEEEEEEEeeCCCEEEEE-eCCCeEEEEecCCCceEEEecCCCC----CCeEEEEEcCCCCEEEEecCCCcEEEEEc
Q psy17610        164 VMNMICACIVFTYDGKAILSG-WNDGFIRCFTPQSGKLKFIIPNAHN----RGVTALAITQDGTRLLSGGGEGQVRIWKL  238 (515)
Q Consensus       164 ~~~~~v~~~~~~~~~~~l~~~-~~dg~i~~~~~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~d~~i~iw~~  238 (515)
                       ...+|..+.|+|.....+.+ -.+..-.+.++..+... .++....    ....+..|.+.|+++++|...|.+.+++.
T Consensus       105 -f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~-~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a  182 (405)
T KOG1273|consen  105 -FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHS-VLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDA  182 (405)
T ss_pred             -ccCccceeeeccccCCeEEEEEecCCcEEEEecCCcee-eccCCCccccccccccccccCCCCEEEEecCcceEEEEec
Confidence             56789999999965433333 23333444444442221 1111111    12233468899999999999999999998


Q ss_pred             cCCceeeEEeecccc-CceEEEEEecCCCEEEEEeCCCcEEEEEcccceEE---------EEE---EcCccEEEEEEcCC
Q psy17610        239 TRESQSLQCVLKEHT-SSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRL---------IIM---ILPSMIMSAAYHPS  305 (515)
Q Consensus       239 ~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~---------~~~---~~~~~~~~~~~~~~  305 (515)
                      .  +.+++..++-.. ..|..+.++..|+.|+.-+.|+.|+.|+++.-...         +.+   ....+-.+++|+.+
T Consensus       183 ~--t~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~ccfs~d  260 (405)
T KOG1273|consen  183 E--TLECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKKCCFSGD  260 (405)
T ss_pred             c--hheeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHHHHHHHhhhhhhheeecCC
Confidence            4  455665555444 78999999999999999999999999998631111         000   11123567899999


Q ss_pred             CcEEEEEEC-CCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccC
Q psy17610        306 EVQLITCST-NKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYRE  368 (515)
Q Consensus       306 ~~~l~~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~  368 (515)
                      |.++++++. ...+++|....|..++-+.+........+.|+|-...+++- ..|.+++|....
T Consensus       261 geYv~a~s~~aHaLYIWE~~~GsLVKILhG~kgE~l~DV~whp~rp~i~si-~sg~v~iw~~~~  323 (405)
T KOG1273|consen  261 GEYVCAGSARAHALYIWEKSIGSLVKILHGTKGEELLDVNWHPVRPIIASI-ASGVVYIWAVVQ  323 (405)
T ss_pred             ccEEEeccccceeEEEEecCCcceeeeecCCchhheeecccccceeeeeec-cCCceEEEEeec
Confidence            999988765 46799999999999999998876778889999987777766 678999997643

>KOG0300|consensus

Probab=99.96  E-value=6.7e-28  Score=195.57  Aligned_cols=291  Identities=14%  Similarity=0.217  Sum_probs=243.0

Q ss_pred             eeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEe
Q psy17610        115 TLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFT  194 (515)
Q Consensus       115 ~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~  194 (515)
                      .+...+.||.+.|..++-....+.+.+++.|.+.+||.++++.++.++.+|.+.|.++.|++.+.++++++.|++.+||.
T Consensus       139 ~lvre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~  218 (481)
T KOG0300|consen  139 RLVRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWK  218 (481)
T ss_pred             eehhhhcccccceeeehhhcCCcceeecccccceeEEeeccccceeeecccccceeeEEeccccceEEEccCCcchHHHH
Confidence            45556789999999999987777788888899999999999999999999999999999999999999999999999996


Q ss_pred             ------cCC--------C--------------------------ceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEE
Q psy17610        195 ------PQS--------G--------------------------KLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVR  234 (515)
Q Consensus       195 ------~~~--------~--------------------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~  234 (515)
                            ...        +                          .++..+ .+|...|.+..|...|+.+++++.|.+..
T Consensus       219 ~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~l-tgH~~vV~a~dWL~gg~Q~vTaSWDRTAn  297 (481)
T KOG0300|consen  219 AAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRL-TGHRAVVSACDWLAGGQQMVTASWDRTAN  297 (481)
T ss_pred             HhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeee-eccccceEehhhhcCcceeeeeeccccce
Confidence                  111        0                          011223 57889999999999999999999999999


Q ss_pred             EEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccce-EEEEEEcC-ccEEEEEEcCCCcEEEEE
Q psy17610        235 IWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKST-RLIIMILP-SMIMSAAYHPSEVQLITC  312 (515)
Q Consensus       235 iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-~~~~~~~~-~~~~~~~~~~~~~~l~~~  312 (515)
                      +||+  ++..++..+.+|....+.++-+|..+++++.+.|.+.++||++..- .+..+..+ ..+++..|..+. .++++
T Consensus       298 lwDV--Etge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~dd-~vVSg  374 (481)
T KOG0300|consen  298 LWDV--ETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTDD-RVVSG  374 (481)
T ss_pred             eeee--ccCceeccccCcchhccccccCCcceEEEEeccCceeEeccchhhcceeeeecccccceeEEEEecCC-ceeec
Confidence            9999  5678888999999999999999999999999999999999998542 34444444 468888887665 57899


Q ss_pred             ECCCeEEEEeCCCC-ceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeee----eeccCCCCCeeEEEE
Q psy17610        313 STNKMIDYWETCDG-SIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPC----FVGIGHAASITKIKI  387 (515)
Q Consensus       313 ~~~~~i~~~d~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~----~~~~~~~~~i~~~~~  387 (515)
                      +.|.++++||+++. .++.++...  .+++.++.+..+..++.-..+..|++||+...+..    ..-++|..-|+|.+|
T Consensus       375 SDDrTvKvWdLrNMRsplATIRtd--S~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~RlaRlPrtsRqgHrRMV~c~AW  452 (481)
T KOG0300|consen  375 SDDRTVKVWDLRNMRSPLATIRTD--SPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRLARLPRTSRQGHRRMVTCCAW  452 (481)
T ss_pred             CCCceEEEeeeccccCcceeeecC--CccceeEeecCCceEEeccCCceEEEEecCCCccccCCcccccccceeeeeeec
Confidence            99999999999886 456677665  78899999998889999999999999999654322    233589999999999


Q ss_pred             CCCC--cEEEEEeCCCcEEEEeCCCC
Q psy17610        388 SPDK--KVIVSVSADGGIFLWTFPEL  411 (515)
Q Consensus       388 ~~~~--~~l~~~~~dg~i~iw~~~~~  411 (515)
                      ..+.  .-|++++-|..+.-|++...
T Consensus       453 ~eehp~cnLftcGFDR~v~gW~in~p  478 (481)
T KOG0300|consen  453 LEEHPACNLFTCGFDRMVAGWKINTP  478 (481)
T ss_pred             cccCcccccccccccceeeeeEeccc
Confidence            8643  35889999999999988653

>KOG0301|consensus

Probab=99.96  E-value=2.1e-27  Score=212.24  Aligned_cols=282  Identities=20%  Similarity=0.332  Sum_probs=237.3

Q ss_pred             ceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCcee--EEEEecCeEEEE-EEEee-CCCEEEEEeCCCe
Q psy17610        114 FTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNEL--LRISVMNMICAC-IVFTY-DGKAILSGWNDGF  189 (515)
Q Consensus       114 ~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~--~~~~~~~~~v~~-~~~~~-~~~~l~~~~~dg~  189 (515)
                      .++...+.+|...|..+++.+.. .+++++.|+++++|+-..++-+  ..+.++.+-+.+ +++.+ ++-.+++|+.|..
T Consensus         4 Y~ls~~l~gH~~DVr~v~~~~~~-~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~   82 (745)
T KOG0301|consen    4 YKLSHELEGHKSDVRAVAVTDGV-CIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTT   82 (745)
T ss_pred             ceeEEEeccCccchheeEecCCe-EEeecCCCCceeeeeccCcccccceecccCcceeeccceeccccCcceEeecccce
Confidence            45677888999999999987664 8999999999999997655443  345667776665 77775 4456999999999


Q ss_pred             EEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEE
Q psy17610        190 IRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAM  269 (515)
Q Consensus       190 i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  269 (515)
                      |.+|.+.+..+...+ .+|+..|.+++...++. +++|+.|.++++|..    .++...+++|+..|+++..-|++ .++
T Consensus        83 i~v~~~~~~~P~~~L-kgH~snVC~ls~~~~~~-~iSgSWD~TakvW~~----~~l~~~l~gH~asVWAv~~l~e~-~~v  155 (745)
T KOG0301|consen   83 IIVFKLSQAEPLYTL-KGHKSNVCSLSIGEDGT-LISGSWDSTAKVWRI----GELVYSLQGHTASVWAVASLPEN-TYV  155 (745)
T ss_pred             EEEEecCCCCchhhh-hccccceeeeecCCcCc-eEecccccceEEecc----hhhhcccCCcchheeeeeecCCC-cEE
Confidence            999999999999888 79999999999888877 999999999999986    33455689999999999999987 899


Q ss_pred             EEeCCCcEEEEEcccceEEEEEEcC-ccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCC
Q psy17610        270 SASTDGTCVLWDLIKSTRLIIMILP-SMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDD  348 (515)
Q Consensus       270 ~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~  348 (515)
                      +|+.|.+|++|.-  ++.++.+..+ ..++.+++-+++ .+++++.||.|+.|++ +++.+.+..+|. ..+.+++..++
T Consensus       156 TgsaDKtIklWk~--~~~l~tf~gHtD~VRgL~vl~~~-~flScsNDg~Ir~w~~-~ge~l~~~~ght-n~vYsis~~~~  230 (745)
T KOG0301|consen  156 TGSADKTIKLWKG--GTLLKTFSGHTDCVRGLAVLDDS-HFLSCSNDGSIRLWDL-DGEVLLEMHGHT-NFVYSISMALS  230 (745)
T ss_pred             eccCcceeeeccC--CchhhhhccchhheeeeEEecCC-CeEeecCCceEEEEec-cCceeeeeeccc-eEEEEEEecCC
Confidence            9999999999975  6666666555 468888888764 5778999999999999 899999999887 89999998888


Q ss_pred             CCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCC
Q psy17610        349 GKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPEL  411 (515)
Q Consensus       349 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  411 (515)
                      +..++++++|++++||+..  ++.+.+.-....|.++.+-++|. +++|+.||.|+||.....
T Consensus       231 ~~~Ivs~gEDrtlriW~~~--e~~q~I~lPttsiWsa~~L~NgD-Ivvg~SDG~VrVfT~~k~  290 (745)
T KOG0301|consen  231 DGLIVSTGEDRTLRIWKKD--ECVQVITLPTTSIWSAKVLLNGD-IVVGGSDGRVRVFTVDKD  290 (745)
T ss_pred             CCeEEEecCCceEEEeecC--ceEEEEecCccceEEEEEeeCCC-EEEeccCceEEEEEeccc
Confidence            8999999999999999976  56666655566899999988887 778889999999987743

>KOG1963|consensus

Probab=99.96  E-value=1.1e-25  Score=207.08  Aligned_cols=426  Identities=16%  Similarity=0.185  Sum_probs=283.5

Q ss_pred             EEEEecCCCcEEEEEEecCC---CEEEEEecCceEEEEECCCCceeEEeecc----------CccC--------------
Q psy17610         74 ALYLLKDDSGISSLQYNPVN---NKVFVGTVNCEIFLIDMNSGFTLTLVNTC----------HTSA--------------  126 (515)
Q Consensus        74 ~~~~~~~~~~v~~~~~s~~~---~~l~~~~~d~~i~iw~~~~~~~~~~~~~~----------h~~~--------------  126 (515)
                      ...+.+|..+++.+.+.|..   .++.+++.+|.|++||...+..+......          +...              
T Consensus        50 i~~l~~~~a~l~s~~~~~~~~~~~~~~~~sl~G~I~vwd~~~~~Llkt~~~~~~v~~~~~~~~~a~~s~~~~~s~~~~~~  129 (792)
T KOG1963|consen   50 ITSLEDHTAPLTSVIVLPSSENANYLIVCSLDGTIRVWDWSDGELLKTFDNNLPVHALVYKPAQADISANVYVSVEDYSI  129 (792)
T ss_pred             hhhcccccCccceeeecCCCccceEEEEEecCccEEEecCCCcEEEEEEecCCceeEEEechhHhCccceeEeeccccee
Confidence            33566788999999998844   46778899999999999876443322110          0000              


Q ss_pred             ---------------------------------eEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEE----EEecCeEE
Q psy17610        127 ---------------------------------IYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLR----ISVMNMIC  169 (515)
Q Consensus       127 ---------------------------------v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~----~~~~~~~v  169 (515)
                                                       -.++.+++.| .+.....+..+.+|+..++.....    -..|...+
T Consensus       130 ~~~~s~~~~~q~~~~~~~t~~~~~~d~~~~~~~~~~I~~~~~g-e~~~i~~~~~~~~~~v~~~~~~~~~~~~~~~Htf~~  208 (792)
T KOG1963|consen  130 LTTFSKKLSKQSSRFVLATFDSAKGDFLKEHQEPKSIVDNNSG-EFKGIVHMCKIHIYFVPKHTKHTSSRDITVHHTFNI  208 (792)
T ss_pred             eeecccccccceeeeEeeeccccchhhhhhhcCCccEEEcCCc-eEEEEEEeeeEEEEEecccceeeccchhhhhhcccc
Confidence                                             1222233332 122222344566677665431111    01355568


Q ss_pred             EEEEEeeCCCEEEEEeCCCeEEEEecCC---CceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeE
Q psy17610        170 ACIVFTYDGKAILSGWNDGFIRCFTPQS---GKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQ  246 (515)
Q Consensus       170 ~~~~~~~~~~~l~~~~~dg~i~~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~  246 (515)
                      ++.+++|++++++++..||.|.+|.--.   .....+...=|...|++++|+++|.+|++|+.++.+.+|.+.++.   .
T Consensus       209 t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~---k  285 (792)
T KOG1963|consen  209 TCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGK---K  285 (792)
T ss_pred             eeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeecCCC---c
Confidence            9999999999999999999999996332   222333335688999999999999999999999999999996555   3


Q ss_pred             EeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC------------ccEEEEEEcCCCcEEEEEEC
Q psy17610        247 CVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP------------SMIMSAAYHPSEVQLITCST  314 (515)
Q Consensus       247 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~------------~~~~~~~~~~~~~~l~~~~~  314 (515)
                      +-++.-.++|..+.++||+.+......|..|.+....+......+...            +-.+.++++|..+.++..+.
T Consensus       286 qfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~~vln~~  365 (792)
T KOG1963|consen  286 QFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTNSLVLNGH  365 (792)
T ss_pred             ccccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhccCccCCCccccccccccceeEEEcCCCCceeecCC
Confidence            345666889999999999999999999999999987665544443322            23577889998888888999


Q ss_pred             CCeEEEEeCCCCceEEEEecC----------CCccEEEEEEcCCCCEEEEEc--------CC--CeEEEEEccCCeeee-
Q psy17610        315 NKMIDYWETCDGSIIRSLEGS----------DVAAVNCVDFVDDGKYFLTGG--------AD--QIVKMWMYREGVPCF-  373 (515)
Q Consensus       315 ~~~i~~~d~~~~~~~~~~~~~----------~~~~i~~~~~~~~~~~l~~~~--------~d--g~i~i~d~~~~~~~~-  373 (515)
                      .+.+.+||+.+.+.+..+...          ..-.++.++.+..|.++++.-        .|  -.+++|-........ 
T Consensus       366 ~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~~~kt~~  445 (792)
T KOG1963|consen  366 PGHVQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVARSRFGSWMATLEARIDKFNFFDGEVSLKFWQYNPNSKTFI  445 (792)
T ss_pred             CceEEEEeccccceeeeEEEEeecccCCcceeEEeeeeehhhccceEEEEeeeeehhhhccCceEEEEEEEEcCCcceeE
Confidence            999999999998877666421          113467777788899998863        23  357889775543322 


Q ss_pred             ----eccCCCCCeeEEEECC-C-CcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEe
Q psy17610        374 ----VGIGHAASITKIKISP-D-KKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSA  447 (515)
Q Consensus       374 ----~~~~~~~~i~~~~~~~-~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  447 (515)
                          ...+|...+...++.+ . ....++++.||.+++|-+...+.......          ......+...|..+++.+
T Consensus       446 L~T~I~~PH~~~~vat~~~~~~rs~~~vta~~dg~~KiW~~~~~~n~~k~~s----------~W~c~~i~sy~k~~i~a~  515 (792)
T KOG1963|consen  446 LNTKINNPHGNAFVATIFLNPTRSVRCVTASVDGDFKIWVFTDDSNIYKKSS----------NWTCKAIGSYHKTPITAL  515 (792)
T ss_pred             EEEEEecCCCceeEEEEEecCcccceeEEeccCCeEEEEEEecccccCcCcc----------ceEEeeeeccccCcccch
Confidence                2357877766666654 2 33799999999999999865543221111          112222233467789999


Q ss_pred             eeccCCcEEEEeecCCeEEEEecCC-CeeeeeecccccceEEEEEEcCCC--cEEEEeecCCeEEEEEEeC
Q psy17610        448 AYHPSEVQLITCSTNKMIDYWETCD-GSIIRSLEGSDVAAVNCVDFVDDG--KYFLTGGADQIVKICLYIA  515 (515)
Q Consensus       448 ~~s~~~~~l~~~~~dg~v~iwd~~~-~~~~~~~~~~~~~~v~~~~~s~~~--~~l~s~~~dg~v~iw~~~~  515 (515)
                      +|+.||..|+.+ .++.|.+||..+ .++...... ...++..+.|....  ...+.....+.+.+|++++
T Consensus       516 ~fs~dGslla~s-~~~~Itiwd~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~WNll~  584 (792)
T KOG1963|consen  516 CFSQDGSLLAVS-FDDTITIWDYDTKNELLCTEGS-RNWPIAELLFTAQTQNDGALVHATQQRLSVWNLLS  584 (792)
T ss_pred             hhcCCCcEEEEe-cCCEEEEecCCChhhhhccccc-cccchHhHhhhcccccccceeeccCceEehHhhhh
Confidence            999999766655 588899999988 333332222 22344444443211  1123344567788888753

>KOG1274|consensus

Probab=99.96  E-value=6.1e-27  Score=215.92  Aligned_cols=274  Identities=17%  Similarity=0.250  Sum_probs=227.6

Q ss_pred             ccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCC-ceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCc
Q psy17610        121 TCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTL-NELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGK  199 (515)
Q Consensus       121 ~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~  199 (515)
                      .+|...-+.++|.|+|..|+++++|+.|++|+.... +....+..+...|.+++.  ++.+|++++.+++|.+|.+.+++
T Consensus        10 yaht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~--~s~~f~~~s~~~tv~~y~fps~~   87 (933)
T KOG1274|consen   10 YAHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIAC--YSNHFLTGSEQNTVLRYKFPSGE   87 (933)
T ss_pred             hhccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEee--cccceEEeeccceEEEeeCCCCC
Confidence            358889999999999999999999999999998766 455555556777777665  45689999999999999999887


Q ss_pred             eEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEE
Q psy17610        200 LKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVL  279 (515)
Q Consensus       200 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i  279 (515)
                      .-..+ ....-++.+++|+.+|++++.|+.|-.|++-+..  .......+.+|..+|.++.|+|++++|++.+.||.|++
T Consensus        88 ~~~iL-~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~--D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~i  164 (933)
T KOG1274|consen   88 EDTIL-ARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLD--DSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQI  164 (933)
T ss_pred             cccee-eeeeccceEEEEecCCcEEEeecCceeEEEEecc--ccchheeecccCCceeeeeEcCCCCEEEEEecCceEEE
Confidence            65444 4556789999999999999999999999999985  44556678999999999999999999999999999999


Q ss_pred             EEcccceEEEEEEc---------CccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCc-cEEEEEEcCCC
Q psy17610        280 WDLIKSTRLIIMIL---------PSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVA-AVNCVDFVDDG  349 (515)
Q Consensus       280 wd~~~~~~~~~~~~---------~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~i~~~~~~~~~  349 (515)
                      ||+.++.....+..         ...+..++|+|++..+++...++.|.+|+...++....+...... .+.++.|+|+|
T Consensus       165 w~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG  244 (933)
T KOG1274|consen  165 WDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNG  244 (933)
T ss_pred             EEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCCC
Confidence            99998876655432         234778999999999999999999999999999998888764433 48999999999


Q ss_pred             CEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcE
Q psy17610        350 KYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGI  403 (515)
Q Consensus       350 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i  403 (515)
                      +|||+++.+|.|.|||.++-+.    ......|++++|.|+.+.+-.....|..
T Consensus       245 ~YiAAs~~~g~I~vWnv~t~~~----~~~~~~Vc~~aw~p~~n~it~~~~~g~~  294 (933)
T KOG1274|consen  245 KYIAASTLDGQILVWNVDTHER----HEFKRAVCCEAWKPNANAITLITALGTL  294 (933)
T ss_pred             cEEeeeccCCcEEEEecccchh----ccccceeEEEecCCCCCeeEEEeecccc
Confidence            9999999999999999987222    3345789999999987765544444433

>KOG1538|consensus

Probab=99.96  E-value=1.1e-25  Score=200.51  Aligned_cols=275  Identities=15%  Similarity=0.183  Sum_probs=221.3

Q ss_pred             cEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEE
Q psy17610         83 GISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRI  162 (515)
Q Consensus        83 ~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~  162 (515)
                      .|..++|-|||..|+.+..+ .+.+||.+.| .+...+++|.+.|.+++|+.||+.+++++.|+.|.+|+-.- +-+.++
T Consensus        14 ci~d~afkPDGsqL~lAAg~-rlliyD~ndG-~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~kl-EG~LkY   90 (1081)
T KOG1538|consen   14 CINDIAFKPDGTQLILAAGS-RLLVYDTSDG-TLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKL-EGILKY   90 (1081)
T ss_pred             chheeEECCCCceEEEecCC-EEEEEeCCCc-ccccccccccceEEEEEEccCCceeccCCCceeEEEecccc-cceeee
Confidence            79999999999999887655 8999999997 45557889999999999999999999999999999998643 223333


Q ss_pred             EecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCc
Q psy17610        163 SVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRES  242 (515)
Q Consensus       163 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~  242 (515)
                       .|.+.|.|+.|+|-...|++++-. ..-+|..+......   ......+.+.+|..||++++.|-.||+|.+-+-..+.
T Consensus        91 -SH~D~IQCMsFNP~~h~LasCsLs-dFglWS~~qK~V~K---~kss~R~~~CsWtnDGqylalG~~nGTIsiRNk~gEe  165 (1081)
T KOG1538|consen   91 -SHNDAIQCMSFNPITHQLASCSLS-DFGLWSPEQKSVSK---HKSSSRIICCSWTNDGQYLALGMFNGTISIRNKNGEE  165 (1081)
T ss_pred             -ccCCeeeEeecCchHHHhhhcchh-hccccChhhhhHHh---hhhheeEEEeeecCCCcEEEEeccCceEEeecCCCCc
Confidence             488999999999999999988754 37788876544332   2345678999999999999999999999998765444


Q ss_pred             eeeEEeeccccCceEEEEEecCC-----CEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCe
Q psy17610        243 QSLQCVLKEHTSSVSVIQIKSDS-----KEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKM  317 (515)
Q Consensus       243 ~~~~~~~~~~~~~v~~~~~~~~~-----~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  317 (515)
                      ...+....+..++|.+++|+|..     ..++......++.++.+.....-+.-...-...++.+.++|.+++.|+.++.
T Consensus       166 k~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~LsG~~Igk~r~L~FdP~CisYf~NGEy~LiGGsdk~  245 (1081)
T KOG1538|consen  166 KVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLSGKQIGKDRALNFDPCCISYFTNGEYILLGGSDKQ  245 (1081)
T ss_pred             ceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEecceeecccccCCCCchhheeccCCcEEEEccCCCc
Confidence            44444445678899999999863     4577777778888887754333334444556788999999999999999999


Q ss_pred             EEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEcc
Q psy17610        318 IDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYR  367 (515)
Q Consensus       318 i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~  367 (515)
                      +.+|. +.|-.+.++.... ..|..++..|+++.++.|+.||+|..|++-
T Consensus       246 L~~fT-R~GvrLGTvg~~D-~WIWtV~~~PNsQ~v~~GCqDGTiACyNl~  293 (1081)
T KOG1538|consen  246 LSLFT-RDGVRLGTVGEQD-SWIWTVQAKPNSQYVVVGCQDGTIACYNLI  293 (1081)
T ss_pred             eEEEe-ecCeEEeeccccc-eeEEEEEEccCCceEEEEEccCeeehhhhH
Confidence            99996 5666666666544 899999999999999999999999999763

>KOG1332|consensus

Probab=99.96  E-value=8.3e-28  Score=187.73  Aligned_cols=252  Identities=19%  Similarity=0.314  Sum_probs=202.7

Q ss_pred             EecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCce-eeEEeeccccCceEEEEEec--CCCEEEEEeCCCcEEE
Q psy17610        203 IIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQ-SLQCVLKEHTSSVSVIQIKS--DSKEAMSASTDGTCVL  279 (515)
Q Consensus       203 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~-~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~i  279 (515)
                      ++...|...|..+...--|++|++++.|++|+||..+.+.+ .++..+.+|.++|..++|..  -|..|++++.||.|.+
T Consensus         5 ~idt~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIi   84 (299)
T KOG1332|consen    5 TIDTQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVII   84 (299)
T ss_pred             ehhhhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEE
Confidence            44467899999988888899999999999999999987665 78889999999999999965  7999999999999999


Q ss_pred             EEcccceEEEEE---EcCccEEEEEEcCC--CcEEEEEECCCeEEEEeCCCC--ceEEEEecCCCccEEEEEEcCC---C
Q psy17610        280 WDLIKSTRLIIM---ILPSMIMSAAYHPS--EVQLITCSTNKMIDYWETCDG--SIIRSLEGSDVAAVNCVDFVDD---G  349 (515)
Q Consensus       280 wd~~~~~~~~~~---~~~~~~~~~~~~~~--~~~l~~~~~~~~i~~~d~~~~--~~~~~~~~~~~~~i~~~~~~~~---~  349 (515)
                      |.-.+++-.+..   .+...+.+++|.|.  |-.|++++.||.|.+++.+..  -....+...|.-.+++++|.|-   |
T Consensus        85 Wke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g  164 (299)
T KOG1332|consen   85 WKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPG  164 (299)
T ss_pred             EecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCc
Confidence            998877433332   34567999999885  578899999999999887654  3334444445578999999985   4


Q ss_pred             -----------CEEEEEcCCCeEEEEEccCC--eeeeeccCCCCCeeEEEECCCC----cEEEEEeCCCcEEEEeCCCCc
Q psy17610        350 -----------KYFLTGGADQIVKMWMYREG--VPCFVGIGHAASITKIKISPDK----KVIVSVSADGGIFLWTFPELE  412 (515)
Q Consensus       350 -----------~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~i~~~~~~~~~----~~l~~~~~dg~i~iw~~~~~~  412 (515)
                                 +.|++|+.|+.|+||+..++  +.-.++.+|.+.|+.++|.|.-    .+||+++.||++.||......
T Consensus       165 ~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~  244 (299)
T KOG1332|consen  165 SLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEY  244 (299)
T ss_pred             cccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCcc
Confidence                       56999999999999999875  3345588999999999999953    589999999999999876321


Q ss_pred             CccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecC
Q psy17610        413 DDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETC  471 (515)
Q Consensus       413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~  471 (515)
                      .+                 -....+...+..+..+.||+.|+.|++++.|..|.+|.-.
T Consensus       245 e~-----------------wk~tll~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~  286 (299)
T KOG1332|consen  245 EP-----------------WKKTLLEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWKEN  286 (299)
T ss_pred             Cc-----------------ccccccccCCcceEEEEEeccccEEEEecCCcEEEEEEeC
Confidence            11                 0111122245669999999999999999999999999743

>KOG0264|consensus

Probab=99.96  E-value=6.8e-27  Score=199.00  Aligned_cols=259  Identities=19%  Similarity=0.331  Sum_probs=201.2

Q ss_pred             CCCCCCeEEEEEcCCC-CEEEEecCCCcEEEEEccCCce--------eeEEeeccccCceEEEEEecCC-CEEEEEeCCC
Q psy17610        206 NAHNRGVTALAITQDG-TRLLSGGGEGQVRIWKLTRESQ--------SLQCVLKEHTSSVSVIQIKSDS-KEAMSASTDG  275 (515)
Q Consensus       206 ~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iw~~~~~~~--------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~  275 (515)
                      ..|.+.|+.+.+.|+. ..+++.+..+.+.|||......        .+...+.+|...-.+++|++.. ..+++++.|+
T Consensus       121 i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~  200 (422)
T KOG0264|consen  121 INHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDH  200 (422)
T ss_pred             ccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCCC
Confidence            4799999999999954 5667778889999999864322        2334788999878889998853 4689999999


Q ss_pred             cEEEEEcccceE-------EEEE-EcCccEEEEEEcCC-CcEEEEEECCCeEEEEeCCC--CceEEEEecCCCccEEEEE
Q psy17610        276 TCVLWDLIKSTR-------LIIM-ILPSMIMSAAYHPS-EVQLITCSTNKMIDYWETCD--GSIIRSLEGSDVAAVNCVD  344 (515)
Q Consensus       276 ~i~iwd~~~~~~-------~~~~-~~~~~~~~~~~~~~-~~~l~~~~~~~~i~~~d~~~--~~~~~~~~~~~~~~i~~~~  344 (515)
                      +|++||+.....       ...+ .+...+..++|++- ...+.+++.|+.+.+||+++  .++......|. +.++|++
T Consensus       201 ~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~-~~vn~~~  279 (422)
T KOG0264|consen  201 TICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHS-AEVNCVA  279 (422)
T ss_pred             cEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccC-CceeEEE
Confidence            999999975432       2222 34457899999995 56778899999999999995  45555555555 9999999


Q ss_pred             EcC-CCCEEEEEcCCCeEEEEEccCC-eeeeeccCCCCCeeEEEECCC-CcEEEEEeCCCcEEEEeCCCCcCccCCCccc
Q psy17610        345 FVD-DGKYFLTGGADQIVKMWMYREG-VPCFVGIGHAASITKIKISPD-KKVIVSVSADGGIFLWTFPELEDDVGDSRSL  421 (515)
Q Consensus       345 ~~~-~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~  421 (515)
                      |+| ++..||+|+.|++|++||+++. +++..+.+|...|.++.|+|. ...||+++.|+.+.+||+.....+...... 
T Consensus       280 fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda-  358 (422)
T KOG0264|consen  280 FNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDA-  358 (422)
T ss_pred             eCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccccChhhh-
Confidence            999 6678899999999999999884 677889999999999999994 568899999999999999876543221110 


Q ss_pred             ceeeecccccccceeeecCcccEEEeeeccCCcE-EEEeecCCeEEEEecC
Q psy17610        422 SSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQ-LITCSTNKMIDYWETC  471 (515)
Q Consensus       422 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~-l~~~~~dg~v~iwd~~  471 (515)
                           ..........-.+|...|..+.|+|...+ +++.++|+.+.||...
T Consensus       359 -----~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s  404 (422)
T KOG0264|consen  359 -----EDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMA  404 (422)
T ss_pred             -----ccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecc
Confidence                 00111223445678889999999999885 6688899999999975

>KOG0650|consensus

Probab=99.96  E-value=5.8e-27  Score=205.86  Aligned_cols=326  Identities=18%  Similarity=0.195  Sum_probs=245.8

Q ss_pred             ccCcceeeeccceEEEEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCc-E
Q psy17610         60 VNAEDVSLYSAGVTALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFS-S  138 (515)
Q Consensus        60 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~  138 (515)
                      .+..+.+-|.. ...+...+|.+.|.|+...|.|.+||+|+.||+++||.+.+|.++....  ..+.|.|++|+|.+. .
T Consensus       380 Psp~dLrPFPt-~~~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~--~d~~I~~vaw~P~~~~~  456 (733)
T KOG0650|consen  380 PSPKDLRPFPT-RCALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQ--FDSEIRSVAWNPLSDLC  456 (733)
T ss_pred             CChhhcCCCcc-eeeeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEe--ecceeEEEEecCCCCce
Confidence            33444444443 3456788999999999999999999999999999999999998888765  456899999999764 3


Q ss_pred             EEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEE----eCCCeEEEEecCCCce----EEEecCCCCC
Q psy17610        139 VFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSG----WNDGFIRCFTPQSGKL----KFIIPNAHNR  210 (515)
Q Consensus       139 l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~----~~dg~i~~~~~~~~~~----~~~~~~~~~~  210 (515)
                      +++++....+.|-+..-|..+....             ....|+.+    ..++.+..|.-...+.    +... -.|..
T Consensus       457 vLAvA~~~~~~ivnp~~G~~~e~~~-------------t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~-I~~~k  522 (733)
T KOG0650|consen  457 VLAVAVGECVLIVNPIFGDRLEVGP-------------TKELLASAPNESEPDAAVVTWSRASLDELEKGVCIV-IKHPK  522 (733)
T ss_pred             eEEEEecCceEEeCccccchhhhcc-------------hhhhhhcCCCccCCcccceeechhhhhhhccceEEE-EecCC
Confidence            4555555557777765553222111             01111111    2345677786542211    2222 47899


Q ss_pred             CeEEEEEcCCCCEEEEecCC---CcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceE
Q psy17610        211 GVTALAITQDGTRLLSGGGE---GQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTR  287 (515)
Q Consensus       211 ~v~~~~~~~~~~~l~~~~~d---~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~  287 (515)
                      .|..+.|+..|.+|++...+   ..|.|.++..  ...+..+....+.|.++.|+|...+|+.++. ..|++||+...+.
T Consensus       523 ~i~~vtWHrkGDYlatV~~~~~~~~VliHQLSK--~~sQ~PF~kskG~vq~v~FHPs~p~lfVaTq-~~vRiYdL~kqel  599 (733)
T KOG0650|consen  523 SIRQVTWHRKGDYLATVMPDSGNKSVLIHQLSK--RKSQSPFRKSKGLVQRVKFHPSKPYLFVATQ-RSVRIYDLSKQEL  599 (733)
T ss_pred             ccceeeeecCCceEEEeccCCCcceEEEEeccc--ccccCchhhcCCceeEEEecCCCceEEEEec-cceEEEehhHHHH
Confidence            99999999999999987653   5788999853  3334455566778999999999988888876 5899999988766


Q ss_pred             EEEEEcC-ccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCc-eEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEE
Q psy17610        288 LIIMILP-SMIMSAAYHPSEVQLITCSTNKMIDYWETCDGS-IIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWM  365 (515)
Q Consensus       288 ~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d  365 (515)
                      ++.+... ..+..++.+|.|..++.++.++.+..||+.-.. +.+++..|. ..++.++|++.-.++++|+.||++.||.
T Consensus       600 vKkL~tg~kwiS~msihp~GDnli~gs~d~k~~WfDldlsskPyk~lr~H~-~avr~Va~H~ryPLfas~sdDgtv~Vfh  678 (733)
T KOG0650|consen  600 VKKLLTGSKWISSMSIHPNGDNLILGSYDKKMCWFDLDLSSKPYKTLRLHE-KAVRSVAFHKRYPLFASGSDDGTVIVFH  678 (733)
T ss_pred             HHHHhcCCeeeeeeeecCCCCeEEEecCCCeeEEEEcccCcchhHHhhhhh-hhhhhhhhccccceeeeecCCCcEEEEe
Confidence            6555444 468999999999999999999999999998764 445555554 8999999999999999999999999985


Q ss_pred             cc-------C--CeeeeeccCCCCC----eeEEEECCCCcEEEEEeCCCcEEEE
Q psy17610        366 YR-------E--GVPCFVGIGHAAS----ITKIKISPDKKVIVSVSADGGIFLW  406 (515)
Q Consensus       366 ~~-------~--~~~~~~~~~~~~~----i~~~~~~~~~~~l~~~~~dg~i~iw  406 (515)
                      -.       +  -.++..+++|...    |....|+|...+|++++.||+|++|
T Consensus       679 g~VY~Dl~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tirlf  732 (733)
T KOG0650|consen  679 GMVYNDLLQNPLIVPLKRLRGHEKTNDLGVLDTIWHPRQPWLFSAGADGTIRLF  732 (733)
T ss_pred             eeeehhhhcCCceEeeeeccCceeecccceEeecccCCCceEEecCCCceEEee
Confidence            32       1  1456778888765    8899999999999999999999998

>KOG0264|consensus

Probab=99.95  E-value=9.4e-27  Score=198.15  Aligned_cols=251  Identities=17%  Similarity=0.278  Sum_probs=200.2

Q ss_pred             eEEEEEecCCCcEEEEEEecCC-CEEEEEecCceEEEEECCCCce---------eEEeeccCccCeEEEEeCCCC-cEEE
Q psy17610         72 VTALYLLKDDSGISSLQYNPVN-NKVFVGTVNCEIFLIDMNSGFT---------LTLVNTCHTSAIYDLQFPVNF-SSVF  140 (515)
Q Consensus        72 ~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~d~~i~iw~~~~~~~---------~~~~~~~h~~~v~~~~~~~~~-~~l~  140 (515)
                      +.....+.|.+.|+.+.+-|+. .++|+++..+.+.|||...-..         ....+.+|+..=++++|++.. -+|+
T Consensus       115 v~i~~~i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Ll  194 (422)
T KOG0264|consen  115 VEISQKINHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLL  194 (422)
T ss_pred             eEEEEeccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEe
Confidence            4555667899999999999955 5677788889999999864221         223677899988899999853 4788


Q ss_pred             EEecCCcEEEEeCCCCc-------eeEEEEecCeEEEEEEEeeCC-CEEEEEeCCCeEEEEecCC--CceEEEecCCCCC
Q psy17610        141 ATCSKNDIRIWSVRTLN-------ELLRISVMNMICACIVFTYDG-KAILSGWNDGFIRCFTPQS--GKLKFIIPNAHNR  210 (515)
Q Consensus       141 ~~~~d~~i~iw~~~~~~-------~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~~~~~~--~~~~~~~~~~~~~  210 (515)
                      +++.|++|++||+....       +...+.+|...|..++|++-. ..+++++.|+.+.|||.++  .++.... .+|.+
T Consensus       195 s~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~-~ah~~  273 (422)
T KOG0264|consen  195 SGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSV-KAHSA  273 (422)
T ss_pred             eccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccc-cccCC
Confidence            88889999999997543       345678999999999999954 5778999999999999995  4444444 78999


Q ss_pred             CeEEEEEcC-CCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCC-CEEEEEeCCCcEEEEEcccceEE
Q psy17610        211 GVTALAITQ-DGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDS-KEAMSASTDGTCVLWDLIKSTRL  288 (515)
Q Consensus       211 ~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~  288 (515)
                      +|+|++|+| ++..||+|+.|++|.+||+++-.. ....+.+|...|..+.|+|.. ..|++++.|+.+.+||+..-...
T Consensus       274 ~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~-~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~e  352 (422)
T KOG0264|consen  274 EVNCVAFNPFNEFILATGSADKTVALWDLRNLNK-PLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEE  352 (422)
T ss_pred             ceeEEEeCCCCCceEEeccCCCcEEEeechhccc-CceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccc
Confidence            999999999 677889999999999999985544 677899999999999999975 46778889999999998642211


Q ss_pred             ------------EEEEc---CccEEEEEEcCCCcEE-EEEECCCeEEEEeCC
Q psy17610        289 ------------IIMIL---PSMIMSAAYHPSEVQL-ITCSTNKMIDYWETC  324 (515)
Q Consensus       289 ------------~~~~~---~~~~~~~~~~~~~~~l-~~~~~~~~i~~~d~~  324 (515)
                                  ..+.+   ...|..+.|+|+..++ ++.+.|+.+.||...
T Consensus       353 q~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s  404 (422)
T KOG0264|consen  353 QSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMA  404 (422)
T ss_pred             cChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecc
Confidence                        12222   2468999999988765 567889999999875

>KOG1274|consensus

Probab=99.95  E-value=8.6e-26  Score=208.43  Aligned_cols=271  Identities=13%  Similarity=0.149  Sum_probs=224.6

Q ss_pred             ecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCC-ceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCC
Q psy17610         78 LKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSG-FTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTL  156 (515)
Q Consensus        78 ~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~  156 (515)
                      ..|..+-+.++|.|+|++|.+++.||.|++|+..+. +.+..+. .+...|.+++....  ++++++.+++|.++...++
T Consensus        10 yaht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~-~~g~~v~~ia~~s~--~f~~~s~~~tv~~y~fps~   86 (933)
T KOG1274|consen   10 YAHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETID-ISGELVSSIACYSN--HFLTGSEQNTVLRYKFPSG   86 (933)
T ss_pred             hhccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhh-ccCceeEEEeeccc--ceEEeeccceEEEeeCCCC
Confidence            368899999999999999999999999999998775 3333333 37778888877544  8999999999999999998


Q ss_pred             ceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEE
Q psy17610        157 NELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIW  236 (515)
Q Consensus       157 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw  236 (515)
                      +.-..+.....++.+++|+-+|++++.|+.|-.|++.+..+......+ .+|.++|.++.|+|++++||+.+-||.|++|
T Consensus        87 ~~~~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~l-rgh~apVl~l~~~p~~~fLAvss~dG~v~iw  165 (933)
T KOG1274|consen   87 EEDTILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVL-RGHDAPVLQLSYDPKGNFLAVSSCDGKVQIW  165 (933)
T ss_pred             CccceeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccchheee-cccCCceeeeeEcCCCCEEEEEecCceEEEE
Confidence            877677777888999999999999999999999999999988888777 7999999999999999999999999999999


Q ss_pred             EccCCceeeEEeecc-------c-cCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC---ccEEEEEEcCC
Q psy17610        237 KLTRESQSLQCVLKE-------H-TSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP---SMIMSAAYHPS  305 (515)
Q Consensus       237 ~~~~~~~~~~~~~~~-------~-~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~  305 (515)
                      ++....  ....+.+       . ...+..++|+|++..++..+.|+.|++|+....+....+...   ..+..+.|+|+
T Consensus       166 ~~~~~~--~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPn  243 (933)
T KOG1274|consen  166 DLQDGI--LSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPN  243 (933)
T ss_pred             Ecccch--hhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCC
Confidence            996432  2222211       1 456788999999999999999999999999988877776543   35899999999


Q ss_pred             CcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCC
Q psy17610        306 EVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQ  359 (515)
Q Consensus       306 ~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg  359 (515)
                      |.||++++.+|.|.+||..+.+.     ......|.+++|.|+.+.+-.-...|
T Consensus       244 G~YiAAs~~~g~I~vWnv~t~~~-----~~~~~~Vc~~aw~p~~n~it~~~~~g  292 (933)
T KOG1274|consen  244 GKYIAASTLDGQILVWNVDTHER-----HEFKRAVCCEAWKPNANAITLITALG  292 (933)
T ss_pred             CcEEeeeccCCcEEEEecccchh-----ccccceeEEEecCCCCCeeEEEeecc
Confidence            99999999999999999988322     11226899999999877654443333

>KOG0650|consensus

Probab=99.95  E-value=3.2e-26  Score=201.20  Aligned_cols=324  Identities=12%  Similarity=0.180  Sum_probs=243.8

Q ss_pred             eEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCC--EEEEEeCCCeEEEE
Q psy17610        116 LTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGK--AILSGWNDGFIRCF  193 (515)
Q Consensus       116 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~dg~i~~~  193 (515)
                      ....+.||++.|.++...|.|.+|++++.||+|+||.+.+|.+++++.. .+.|.|++|+|.+.  .||++... .+.+.
T Consensus       392 ~~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~-d~~I~~vaw~P~~~~~vLAvA~~~-~~~iv  469 (733)
T KOG0650|consen  392 CALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQF-DSEIRSVAWNPLSDLCVLAVAVGE-CVLIV  469 (733)
T ss_pred             eeeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEee-cceeEEEEecCCCCceeEEEEecC-ceEEe
Confidence            4456789999999999999999999999999999999999999999874 45899999999875  44444433 46666


Q ss_pred             ecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEe----cCCCcEEEEEccCCc--eeeEEeeccccCceEEEEEecCCCE
Q psy17610        194 TPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSG----GGEGQVRIWKLTRES--QSLQCVLKEHTSSVSVIQIKSDSKE  267 (515)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~----~~d~~i~iw~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~  267 (515)
                      +..-|..+...              +....|+++    ..++.+..|.-....  ..-++....|...|..+.|+..|.+
T Consensus       470 np~~G~~~e~~--------------~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDY  535 (733)
T KOG0650|consen  470 NPIFGDRLEVG--------------PTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDY  535 (733)
T ss_pred             Cccccchhhhc--------------chhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCce
Confidence            65544221110              001112211    235577888754211  1124455678899999999999999


Q ss_pred             EEEEeCC---CcEEEEEcccceEEEEE-EcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEE
Q psy17610        268 AMSASTD---GTCVLWDLIKSTRLIIM-ILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCV  343 (515)
Q Consensus       268 l~~~~~d---~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~  343 (515)
                      |++...+   ..|.|+++........+ ...+.+.++.|+|...+|++++. ..|++||+..+..++++.... ..+..+
T Consensus       536 latV~~~~~~~~VliHQLSK~~sQ~PF~kskG~vq~v~FHPs~p~lfVaTq-~~vRiYdL~kqelvKkL~tg~-kwiS~m  613 (733)
T KOG0650|consen  536 LATVMPDSGNKSVLIHQLSKRKSQSPFRKSKGLVQRVKFHPSKPYLFVATQ-RSVRIYDLSKQELVKKLLTGS-KWISSM  613 (733)
T ss_pred             EEEeccCCCcceEEEEecccccccCchhhcCCceeEEEecCCCceEEEEec-cceEEEehhHHHHHHHHhcCC-eeeeee
Confidence            9988764   46888888776655555 34457999999999999988765 579999999988887777655 789999


Q ss_pred             EEcCCCCEEEEEcCCCeEEEEEccCC-eeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccc
Q psy17610        344 DFVDDGKYFLTGGADQIVKMWMYREG-VPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLS  422 (515)
Q Consensus       344 ~~~~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~  422 (515)
                      +.+|.|.-|+.|+.|+.+..||+.-. ++..++..|...+++++|++.-.++++|+.||++.|+--.-............
T Consensus       614 sihp~GDnli~gs~d~k~~WfDldlsskPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVP  693 (733)
T KOG0650|consen  614 SIHPNGDNLILGSYDKKMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIVP  693 (733)
T ss_pred             eecCCCCeEEEecCCCeeEEEEcccCcchhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEEeeeeehhhhcCCceEe
Confidence            99999999999999999999999754 67788999999999999999999999999999999985332221111111111


Q ss_pred             eeeecccccccceeeecCc----ccEEEeeeccCCcEEEEeecCCeEEEE
Q psy17610        423 SKISRSTARSTRLIIMILP----SMIMSAAYHPSEVQLITCSTNKMIDYW  468 (515)
Q Consensus       423 ~~~~~~~~~~~~~~~~~~~----~~i~~~~~s~~~~~l~~~~~dg~v~iw  468 (515)
                                 ...+.+|.    -.|..+.|+|...+|++++.||+|++|
T Consensus       694 -----------lK~L~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tirlf  732 (733)
T KOG0650|consen  694 -----------LKRLRGHEKTNDLGVLDTIWHPRQPWLFSAGADGTIRLF  732 (733)
T ss_pred             -----------eeeccCceeecccceEeecccCCCceEEecCCCceEEee
Confidence                       11122232    338899999999999999999999998

>KOG0269|consensus

Probab=99.95  E-value=1.2e-26  Score=209.99  Aligned_cols=286  Identities=14%  Similarity=0.225  Sum_probs=224.7

Q ss_pred             CCcEEEEEEecCCCEEEEEecCceEEEEECCCCc---eeEEeeccC---ccCeEEEEeCC-CCcEEEEEecCCcEEEEeC
Q psy17610         81 DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGF---TLTLVNTCH---TSAIYDLQFPV-NFSSVFATCSKNDIRIWSV  153 (515)
Q Consensus        81 ~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~---~~~~~~~~h---~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~  153 (515)
                      .....++...++-..++.++.. .+.+|..+...   ......+..   .-.+..+.|+. +.++|++++..|.|.+||+
T Consensus        39 k~~~nAIs~nr~~~qiv~AGrs-~lklyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~~~~~NlIAT~s~nG~i~vWdl  117 (839)
T KOG0269|consen   39 KAKANAISVNRDINQIVVAGRS-LLKLYAINPNDFSEKCNHRFKTKQNKFYSAADVKWGQLYSNLIATCSTNGVISVWDL  117 (839)
T ss_pred             ccccceEeecCCcceeEEeccc-ceeeEeeCcccCCcceeeecccccceeeehhhcccccchhhhheeecCCCcEEEEec
Confidence            5667788888998889888876 67777765421   111111111   12356677875 3457777778999999999


Q ss_pred             CC---CceeEEEEecCeEEEEEEEeeCC-CEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcC-CCCEEEEec
Q psy17610        154 RT---LNELLRISVMNMICACIVFTYDG-KAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQ-DGTRLLSGG  228 (515)
Q Consensus       154 ~~---~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~  228 (515)
                      ..   .+.+..+..|...+.++.|++-. .+|++|+.||.|++||++..+...++ .+....|..+.|+| .+..++++.
T Consensus       118 nk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~-~~nSESiRDV~fsp~~~~~F~s~~  196 (839)
T KOG0269|consen  118 NKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTF-RSNSESIRDVKFSPGYGNKFASIH  196 (839)
T ss_pred             CccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccc-cccchhhhceeeccCCCceEEEec
Confidence            87   55667888999999999999854 57889999999999999998888877 57888999999999 678999999


Q ss_pred             CCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccce--EEEEEEcCccEEEEEEcCCC
Q psy17610        229 GEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKST--RLIIMILPSMIMSAAYHPSE  306 (515)
Q Consensus       229 ~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~  306 (515)
                      +.|.+++||++. ...+...+.+|.++|.++.|+|++.+|++|+.|++|+|||+.+.+  ....+....++..+.|-|..
T Consensus       197 dsG~lqlWDlRq-p~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~~~tInTiapv~rVkWRP~~  275 (839)
T KOG0269|consen  197 DSGYLQLWDLRQ-PDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAKPKHTINTIAPVGRVKWRPAR  275 (839)
T ss_pred             CCceEEEeeccC-chhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCCccceeEEeecceeeeeeeccCc
Confidence            999999999984 455666788999999999999999999999999999999997654  45666777899999999987


Q ss_pred             cEEEE-EE--CCCeEEEEeCCCCceEEEEecCCCccEEEEEEcC-CCCEEEEEcCCCeEEEEEccCC
Q psy17610        307 VQLIT-CS--TNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVD-DGKYFLTGGADQIVKMWMYREG  369 (515)
Q Consensus       307 ~~l~~-~~--~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~  369 (515)
                      .+.++ ++  .|-.|++||++...........|...++.++|.. |...+.+++.||++..-.+++.
T Consensus       276 ~~hLAtcsmv~dtsV~VWDvrRPYIP~~t~~eH~~~vt~i~W~~~d~~~l~s~sKD~tv~qh~~kna  342 (839)
T KOG0269|consen  276 SYHLATCSMVVDTSVHVWDVRRPYIPYATFLEHTDSVTGIAWDSGDRINLWSCSKDGTVLQHLFKNA  342 (839)
T ss_pred             cchhhhhhccccceEEEEeeccccccceeeeccCccccceeccCCCceeeEeecCccHHHHhhhhcc
Confidence            66544 33  3778999999887765554444448888999976 5567888999998876655543

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.95  E-value=2.3e-22  Score=192.36  Aligned_cols=370  Identities=26%  Similarity=0.447  Sum_probs=288.9

Q ss_pred             EEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCc-cCeEEEEe-CCCCc-EEEEEec-CCcEEEE
Q psy17610         76 YLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHT-SAIYDLQF-PVNFS-SVFATCS-KNDIRIW  151 (515)
Q Consensus        76 ~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~-~~v~~~~~-~~~~~-~l~~~~~-d~~i~iw  151 (515)
                      ....|...+.++.+.+.+..++.++.|+.+.+|+...+......+.++. ..+..+.+ ++++. .++..+. |+.+.+|
T Consensus        60 ~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~  139 (466)
T COG2319          60 LLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLW  139 (466)
T ss_pred             eeeeccceEEEEEECCCCcEEEEecCCCcEEEEEcCCCceeEEEEeccCCCceeeEEEECCCcceEEeccCCCCccEEEE
Confidence            5667999999999999999999999999999999998652333444333 47777777 88887 4444445 8999999


Q ss_pred             eCCC-CceeEEEEecCeEEEEEEEeeCCCEEEEEeC-CCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCC-EEEEec
Q psy17610        152 SVRT-LNELLRISVMNMICACIVFTYDGKAILSGWN-DGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGT-RLLSGG  228 (515)
Q Consensus       152 ~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~  228 (515)
                      +... ......+..|...+..+.|+|++..++.++. ++.+++|+...+.....+ ..|...+.+++|+|++. .+++++
T Consensus       140 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~  218 (466)
T COG2319         140 DLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTL-AGHTDPVSSLAFSPDGGLLIASGS  218 (466)
T ss_pred             EecCCCeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEee-ccCCCceEEEEEcCCcceEEEEec
Confidence            9998 7888889999999999999999998888885 999999999988877777 56999999999999988 555559


Q ss_pred             CCCcEEEEEccCCceeeEE-eeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceE-EEEE-EcCccEEEEEEcCC
Q psy17610        229 GEGQVRIWKLTRESQSLQC-VLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTR-LIIM-ILPSMIMSAAYHPS  305 (515)
Q Consensus       229 ~d~~i~iw~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~-~~~~-~~~~~~~~~~~~~~  305 (515)
                      .|+.+++||..  ...... .+.+|.... ...|++++..+++++.|+.+++|+...... .... .+...+.++.+.|+
T Consensus       219 ~d~~i~~wd~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  295 (466)
T COG2319         219 SDGTIRLWDLS--TGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPD  295 (466)
T ss_pred             CCCcEEEEECC--CCcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEEecCCccEEEEEECCC
Confidence            99999999875  344444 577787775 448999998899999999999999986664 3333 34568999999998


Q ss_pred             CcEEEEEECCCeEEEEeCCCCceEEEEe--cCCCccEEEEEEcCCCCEEEEE-cCCCeEEEEEccCCeeeeeccCCCCCe
Q psy17610        306 EVQLITCSTNKMIDYWETCDGSIIRSLE--GSDVAAVNCVDFVDDGKYFLTG-GADQIVKMWMYREGVPCFVGIGHAASI  382 (515)
Q Consensus       306 ~~~l~~~~~~~~i~~~d~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~i  382 (515)
                      +..+++++.++.+.+||...........  .+. ..+..+.+.+++..++.+ ..|+.+.+|+............. ..+
T Consensus       296 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~-~~~  373 (466)
T COG2319         296 GKLLASGSSDGTVRLWDLETGKLLSSLTLKGHE-GPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGH-SNV  373 (466)
T ss_pred             CCEEEEeeCCCcEEEEEcCCCceEEEeeecccC-CceEEEEECCCCCEEEEeecCCCcEEeeecCCCceeEEecCC-ceE
Confidence            8888888888889999998888777666  443 468888884343455555 67889999999887633332222 228


Q ss_pred             eEEEECCCCcEEEE-EeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeec
Q psy17610        383 TKIKISPDKKVIVS-VSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCST  461 (515)
Q Consensus       383 ~~~~~~~~~~~l~~-~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~  461 (515)
                      ..+.+.+ ...... +..++.+.+|+..............                    ..+....+++++..++.++.
T Consensus       374 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~  432 (466)
T COG2319         374 LSVSFSP-DGRVVSSGSTDGTVRLWDLSTGSLLRNLDGHT--------------------SRVTSLDFSPDGKSLASGSS  432 (466)
T ss_pred             EEEEECC-CCCEEEEecCCCceEEEecccCeeeeeccCCC--------------------CcEEEEEECCCCcEEEEecC
Confidence            8999998 544444 6789999999987654211111100                    45888999999999999999


Q ss_pred             CCeEEEEecCC
Q psy17610        462 NKMIDYWETCD  472 (515)
Q Consensus       462 dg~v~iwd~~~  472 (515)
                      ++.+++|+..+
T Consensus       433 ~~~~~~~~~~~  443 (466)
T COG2319         433 DNTIRLWDLKT  443 (466)
T ss_pred             CCcEEEEeccC
Confidence            99999999887

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.95  E-value=3.3e-22  Score=191.26  Aligned_cols=368  Identities=26%  Similarity=0.471  Sum_probs=287.5

Q ss_pred             eeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCc-eeEEEEecCe-EEEEEEE-eeCCC-EEEEEeC-CCeEEEE
Q psy17610        119 VNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLN-ELLRISVMNM-ICACIVF-TYDGK-AILSGWN-DGFIRCF  193 (515)
Q Consensus       119 ~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~-~~~~~~~~~~-~v~~~~~-~~~~~-~l~~~~~-dg~i~~~  193 (515)
                      ....|...+..+.+.+.+..++.++.|+.+.+|+...+. ....+..... .+..+.+ .+++. .++..+. ++.+.+|
T Consensus        60 ~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~  139 (466)
T COG2319          60 LLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLW  139 (466)
T ss_pred             eeeeccceEEEEEECCCCcEEEEecCCCcEEEEEcCCCceeEEEEeccCCCceeeEEEECCCcceEEeccCCCCccEEEE
Confidence            345689999999999999999999999999999999887 6666666443 6666666 77777 4555444 8999999


Q ss_pred             ecCC-CceEEEecCCCCCCeEEEEEcCCCCEEEEecC-CCcEEEEEccCCceeeEEeeccccCceEEEEEecCCC-EEEE
Q psy17610        194 TPQS-GKLKFIIPNAHNRGVTALAITQDGTRLLSGGG-EGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSK-EAMS  270 (515)
Q Consensus       194 ~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~  270 (515)
                      +... ......+ ..|...|..++|+|++..+++++. |+.+++|+...  ......+.+|...+.+++|+|++. .+++
T Consensus       140 ~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~  216 (466)
T COG2319         140 DLSTPGKLIRTL-EGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRT--GKPLSTLAGHTDPVSSLAFSPDGGLLIAS  216 (466)
T ss_pred             EecCCCeEEEEE-ecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCC--CceEEeeccCCCceEEEEEcCCcceEEEE
Confidence            9998 5666666 689999999999999998888885 99999999953  556667777999999999999988 5555


Q ss_pred             EeCCCcEEEEEcccceEEE-EEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCce-EEEEecCCCccEEEEEEcCC
Q psy17610        271 ASTDGTCVLWDLIKSTRLI-IMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSI-IRSLEGSDVAAVNCVDFVDD  348 (515)
Q Consensus       271 ~~~d~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~i~~~~~~~~  348 (515)
                      ++.|+.+++||...+.... .+..+.......|+|++..+++++.++.+++|+...... ...+..+ ...+.++.|.|+
T Consensus       217 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~  295 (466)
T COG2319         217 GSSDGTIRLWDLSTGKLLRSTLSGHSDSVVSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGH-SSSVLSVAFSPD  295 (466)
T ss_pred             ecCCCcEEEEECCCCcEEeeecCCCCcceeEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEEecC-CccEEEEEECCC
Confidence            5899999999988776666 344333322227999998889999999999999987765 4444333 488999999998


Q ss_pred             CCEEEEEcCCCeEEEEEccCCeeeeecc--CCCCCeeEEEECCCCcEEEEE-eCCCcEEEEeCCCCcCccCCCcccceee
Q psy17610        349 GKYFLTGGADQIVKMWMYREGVPCFVGI--GHAASITKIKISPDKKVIVSV-SADGGIFLWTFPELEDDVGDSRSLSSKI  425 (515)
Q Consensus       349 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~-~~dg~i~iw~~~~~~~~~~~~~~~~~~~  425 (515)
                      +..+++++.|+.+.+|+..+........  .|...+..+.|.+++..++.+ ..|+.+.+|++.... ..          
T Consensus       296 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~----------  364 (466)
T COG2319         296 GKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGK-PL----------  364 (466)
T ss_pred             CCEEEEeeCCCcEEEEEcCCCceEEEeeecccCCceEEEEECCCCCEEEEeecCCCcEEeeecCCCc-ee----------
Confidence            8888889889889999998877666655  788889999994342455555 678899999987643 00          


Q ss_pred             ecccccccceeeecCcccEEEeeeccCCcEEEE-eecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeec
Q psy17610        426 SRSTARSTRLIIMILPSMIMSAAYHPSEVQLIT-CSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA  504 (515)
Q Consensus       426 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~-~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~  504 (515)
                                ........+..+.+++ ...+.. +..++.+.+|+............+. ..+....+++++..+++++.
T Consensus       365 ----------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  432 (466)
T COG2319         365 ----------KTLEGHSNVLSVSFSP-DGRVVSSGSTDGTVRLWDLSTGSLLRNLDGHT-SRVTSLDFSPDGKSLASGSS  432 (466)
T ss_pred             ----------EEecCCceEEEEEECC-CCCEEEEecCCCceEEEecccCeeeeeccCCC-CcEEEEEECCCCcEEEEecC
Confidence                      0000111167778888 543443 6889999999999988887777664 68999999999999999999


Q ss_pred             CCeEEEEEE
Q psy17610        505 DQIVKICLY  513 (515)
Q Consensus       505 dg~v~iw~~  513 (515)
                      ++.+++|+.
T Consensus       433 ~~~~~~~~~  441 (466)
T COG2319         433 DNTIRLWDL  441 (466)
T ss_pred             CCcEEEEec
Confidence            999999985

>KOG4328|consensus

Probab=99.95  E-value=2.3e-25  Score=189.68  Aligned_cols=306  Identities=15%  Similarity=0.214  Sum_probs=226.9

Q ss_pred             ecCCCceEEEecCCCCCCeEEEEEcCCC--CEEEEecCCCcEEEEEcc--CCceeeEEeeccccCceEEEEEecC-CCEE
Q psy17610        194 TPQSGKLKFIIPNAHNRGVTALAITQDG--TRLLSGGGEGQVRIWKLT--RESQSLQCVLKEHTSSVSVIQIKSD-SKEA  268 (515)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~iw~~~--~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l  268 (515)
                      |+..-...... ..+..+|++++|+|..  +.+++|..-|+|-+||+.  .....-...+..|..+|.++.|+|. ...+
T Consensus       172 ~l~~~~~~~v~-kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i  250 (498)
T KOG4328|consen  172 DLDDYRILNVA-KVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQI  250 (498)
T ss_pred             ccccceeccee-EecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhhe
Confidence            33333333333 5688999999999943  588899999999999995  2334455667889999999999995 4679


Q ss_pred             EEEeCCCcEEEEEcccceEEEEEEc---CccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCce-EEEEecCCCccEEEEE
Q psy17610        269 MSASTDGTCVLWDLIKSTRLIIMIL---PSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSI-IRSLEGSDVAAVNCVD  344 (515)
Q Consensus       269 ~~~~~d~~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~i~~~~  344 (515)
                      ++.+.||+|++-|++.......+..   ......+.++.+...++.+..-|...+||++++.. ...+..|. ..|+.++
T Consensus       251 ~ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~-kKI~sv~  329 (498)
T KOG4328|consen  251 YSSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHK-KKITSVA  329 (498)
T ss_pred             eeeccCceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhh-cccceee
Confidence            9999999999999987654333333   23567788888888888888888999999998766 55555555 6999999


Q ss_pred             EcC-CCCEEEEEcCCCeEEEEEccCCe----eeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCc
Q psy17610        345 FVD-DGKYFLTGGADQIVKMWMYREGV----PCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSR  419 (515)
Q Consensus       345 ~~~-~~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~  419 (515)
                      ++| ...+|++++.|++++|||++.-.    ++.....|...|.+..|||.+..|++.+.|..|+|||..-.........
T Consensus       330 ~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~  409 (498)
T KOG4328|consen  330 LNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLG  409 (498)
T ss_pred             cCCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCceEEeecccccccCCccc
Confidence            999 45678999999999999997632    3344568999999999999888899999999999999852111111111


Q ss_pred             ccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEE-EEEcCCCcE
Q psy17610        420 SLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNC-VDFVDDGKY  498 (515)
Q Consensus       420 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~-~~~s~~~~~  498 (515)
                      .+...     ...      +.--......|.|+..++++|..-..|-|+|-..++.+..+.......|.+ ..|+|-+..
T Consensus       410 ~I~Hn-----~~t------~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q~v~el~~P~~~tI~~vn~~HP~~~~  478 (498)
T KOG4328|consen  410 TIPHN-----NRT------GRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQMVCELHDPESSTIPSVNEFHPMRDT  478 (498)
T ss_pred             eeecc-----Ccc------cccccchhheeCCCccEEEEeccCcceeEEcCCCCEEeeeccCccccccccceeecccccc
Confidence            11000     000      000114456899999999999999999999998888888877766446666 489998885


Q ss_pred             EEEe-ecCCeEEEEE
Q psy17610        499 FLTG-GADQIVKICL  512 (515)
Q Consensus       499 l~s~-~~dg~v~iw~  512 (515)
                      +++| +..|.|.||.
T Consensus       479 ~~aG~~s~Gki~vft  493 (498)
T KOG4328|consen  479 LAAGGNSSGKIYVFT  493 (498)
T ss_pred             eeccCCccceEEEEe
Confidence            5554 4567777763

>KOG0321|consensus

Probab=99.94  E-value=2.2e-25  Score=197.44  Aligned_cols=322  Identities=16%  Similarity=0.207  Sum_probs=226.8

Q ss_pred             EEEEec---CCCEEEEEecCceEEEEECCCCc-----eeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCc
Q psy17610         86 SLQYNP---VNNKVFVGTVNCEIFLIDMNSGF-----TLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLN  157 (515)
Q Consensus        86 ~~~~s~---~~~~l~~~~~d~~i~iw~~~~~~-----~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~  157 (515)
                      +..|++   ....||.+.+||.|.++|...-.     ........|.+.|..+.|-|....|++++.|.++++||+++.+
T Consensus        54 ~~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~  133 (720)
T KOG0321|consen   54 ADSFSAAPNKEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSR  133 (720)
T ss_pred             cccccCCCCccceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeeccce
Confidence            366766   33578999999999999987521     1123455799999999999977788888999999999999988


Q ss_pred             eeEE--EEecCeEEEEEEEeeCC-CEEEEEeCCCeEEEEecCCCce--------------------EE----Ee--cCCC
Q psy17610        158 ELLR--ISVMNMICACIVFTYDG-KAILSGWNDGFIRCFTPQSGKL--------------------KF----II--PNAH  208 (515)
Q Consensus       158 ~~~~--~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~~~~~~~~~--------------------~~----~~--~~~~  208 (515)
                      ....  +.+|...|.+++|.|.. ..|++|+.||.|.|||++-...                    ..    .+  ...+
T Consensus       134 l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~  213 (720)
T KOG0321|consen  134 LVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAA  213 (720)
T ss_pred             eecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccc
Confidence            8766  88999999999999966 4778999999999999763320                    00    00  0234


Q ss_pred             CCCeEE---EEEcCCCCEEEEecC-CCcEEEEEccCCceee------EEeeccc---cCceEEEEEecCCCEEEEEeCCC
Q psy17610        209 NRGVTA---LAITQDGTRLLSGGG-EGQVRIWKLTRESQSL------QCVLKEH---TSSVSVIQIKSDSKEAMSASTDG  275 (515)
Q Consensus       209 ~~~v~~---~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~~~------~~~~~~~---~~~v~~~~~~~~~~~l~~~~~d~  275 (515)
                      ...|.+   +.+..|...||+++. |+.|++||++......      ...+..|   .-.+.++.....|.+|++.+.|+
T Consensus       214 s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~  293 (720)
T KOG0321|consen  214 SNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDN  293 (720)
T ss_pred             cCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCC
Confidence            444555   556668888998887 9999999997543211      1122233   33567778888889999999999


Q ss_pred             cEEEEEcccceEEEEEEcCc-----cEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCC-C
Q psy17610        276 TCVLWDLIKSTRLIIMILPS-----MIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDD-G  349 (515)
Q Consensus       276 ~i~iwd~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~-~  349 (515)
                      .|+.|++.+....-.....+     .-..-..+|++.++++|+.+...++|.+.+.+....+...+...+++++|.|. -
T Consensus       294 sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~pS~~  373 (720)
T KOG0321|consen  294 SIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEAPPALLLGHTREVTTVRWLPSAT  373 (720)
T ss_pred             cEEEEeccccCcCchhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCccCChhhhhCcceEEEEEeeccccC
Confidence            99999997654322221111     22334568999999999999999999999877665555555589999999883 2


Q ss_pred             CEEEEEcCCCeEEEEEccCCe--------------eeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCC
Q psy17610        350 KYFLTGGADQIVKMWMYREGV--------------PCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFP  409 (515)
Q Consensus       350 ~~l~~~~~dg~i~i~d~~~~~--------------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~  409 (515)
                      .-++++++|..+++|++..+-              ....+.+|...+..+.++-.+.+..-  ..+..++|...
T Consensus       374 t~v~TcSdD~~~kiW~l~~~l~e~~~adk~s~v~~~~~rfk~~~p~~~nv~ss~~~t~~~p--R~~~~r~~ssP  445 (720)
T KOG0321|consen  374 TPVATCSDDFRVKIWRLSNGLEEIYAADKDSIVYEYSRRFKGHLPQVLNVNSSLRKTYKDP--REGMNRISSSP  445 (720)
T ss_pred             CCceeeccCcceEEEeccCchhhccccccchhhhhhhhhhhccccccccccccccccccch--hhhccccccCc
Confidence            336666999999999996542              12233455555555555443322221  14445566543

>KOG1538|consensus

Probab=99.94  E-value=4.1e-24  Score=190.60  Aligned_cols=272  Identities=17%  Similarity=0.268  Sum_probs=220.1

Q ss_pred             CeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEec
Q psy17610        126 AIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIP  205 (515)
Q Consensus       126 ~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~  205 (515)
                      .|..++|-|||..|+.+.. ..+.+||...|..+.++++|.+.|.|++|+.||+.+++|+.|..|.+|+..-.   ..+.
T Consensus        14 ci~d~afkPDGsqL~lAAg-~rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klE---G~Lk   89 (1081)
T KOG1538|consen   14 CINDIAFKPDGTQLILAAG-SRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLE---GILK   89 (1081)
T ss_pred             chheeEECCCCceEEEecC-CEEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEeccccc---ceee
Confidence            7999999999988887764 56999999999999999999999999999999999999999999999985433   3333


Q ss_pred             CCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccc
Q psy17610        206 NAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKS  285 (515)
Q Consensus       206 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~  285 (515)
                      ..|...|.|+.|+|-...|++++-. ..-+|...+..   +.. ......+.+++|..||++++.|-.+|+|.+-+-...
T Consensus        90 YSH~D~IQCMsFNP~~h~LasCsLs-dFglWS~~qK~---V~K-~kss~R~~~CsWtnDGqylalG~~nGTIsiRNk~gE  164 (1081)
T KOG1538|consen   90 YSHNDAIQCMSFNPITHQLASCSLS-DFGLWSPEQKS---VSK-HKSSSRIICCSWTNDGQYLALGMFNGTISIRNKNGE  164 (1081)
T ss_pred             eccCCeeeEeecCchHHHhhhcchh-hccccChhhhh---HHh-hhhheeEEEeeecCCCcEEEEeccCceEEeecCCCC
Confidence            5799999999999998899988763 57788864221   111 112456888999999999999999999999875433


Q ss_pred             eEEEEEE---cCccEEEEEEcCCC-----cEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcC
Q psy17610        286 TRLIIMI---LPSMIMSAAYHPSE-----VQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA  357 (515)
Q Consensus       286 ~~~~~~~---~~~~~~~~~~~~~~-----~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~  357 (515)
                      +....-.   ..+++.+++|+|..     ..+++...+.++.+|.+ +|+.+..-..-. -...|+.+.++|.++..|+.
T Consensus       165 ek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~L-sG~~Igk~r~L~-FdP~CisYf~NGEy~LiGGs  242 (1081)
T KOG1538|consen  165 EKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQL-SGKQIGKDRALN-FDPCCISYFTNGEYILLGGS  242 (1081)
T ss_pred             cceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEe-cceeecccccCC-CCchhheeccCCcEEEEccC
Confidence            3333333   23579999999963     46788888889988887 455554333322 45569999999999999999


Q ss_pred             CCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCC
Q psy17610        358 DQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFP  409 (515)
Q Consensus       358 dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~  409 (515)
                      |+.+++|.. .|..+.+.......|..++..|++++++.|+.||+|-.|++-
T Consensus       243 dk~L~~fTR-~GvrLGTvg~~D~WIWtV~~~PNsQ~v~~GCqDGTiACyNl~  293 (1081)
T KOG1538|consen  243 DKQLSLFTR-DGVRLGTVGEQDSWIWTVQAKPNSQYVVVGCQDGTIACYNLI  293 (1081)
T ss_pred             CCceEEEee-cCeEEeeccccceeEEEEEEccCCceEEEEEccCeeehhhhH
Confidence            999999964 677777777788899999999999999999999999999864

>KOG2445|consensus

Probab=99.94  E-value=4.3e-24  Score=172.83  Aligned_cols=277  Identities=14%  Similarity=0.261  Sum_probs=202.7

Q ss_pred             ecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCC--ceeeEEeeccccCceEEEEEec--CCCEEEEEeCCCcEEE
Q psy17610        204 IPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRE--SQSLQCVLKEHTSSVSVIQIKS--DSKEAMSASTDGTCVL  279 (515)
Q Consensus       204 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~--~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~i  279 (515)
                      +..+|..-|+++.|.+.|+.+++++.|++++|||.+..  +.......+.|.+.|..+.|.+  -|+.+++++.|+++.+
T Consensus         8 i~s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~i   87 (361)
T KOG2445|consen    8 IDSGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSI   87 (361)
T ss_pred             cccCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceee
Confidence            34678899999999999999999999999999997544  4456667889999999999965  4889999999999999


Q ss_pred             EEcccc----------eEEEEEEcCccEEEEEEcCC--CcEEEEEECCCeEEEEeCCCCceE------EEEe------cC
Q psy17610        280 WDLIKS----------TRLIIMILPSMIMSAAYHPS--EVQLITCSTNKMIDYWETCDGSII------RSLE------GS  335 (515)
Q Consensus       280 wd~~~~----------~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~i~~~d~~~~~~~------~~~~------~~  335 (515)
                      |.-...          ++.......+.++.+.|.|.  |-.+++++.||.+++|+....-.+      .++.      +.
T Consensus        88 WEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~  167 (361)
T KOG2445|consen   88 WEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGK  167 (361)
T ss_pred             eeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCccc
Confidence            975211          11122234567999999995  778999999999999987654322      2222      12


Q ss_pred             CCccEEEEEEcCC---CCEEEEEcCC-----CeEEEEEccCC----eeeeeccCCCCCeeEEEECCC----CcEEEEEeC
Q psy17610        336 DVAAVNCVDFVDD---GKYFLTGGAD-----QIVKMWMYREG----VPCFVGIGHAASITKIKISPD----KKVIVSVSA  399 (515)
Q Consensus       336 ~~~~i~~~~~~~~---~~~l~~~~~d-----g~i~i~d~~~~----~~~~~~~~~~~~i~~~~~~~~----~~~l~~~~~  399 (515)
                      +..+..|+.|+|.   ..+||+|+.+     +.++||....+    ..+.++.+|..+|++++|.|+    -.+||+++.
T Consensus       168 ~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~k  247 (361)
T KOG2445|consen  168 NKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATK  247 (361)
T ss_pred             ccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEeec
Confidence            2367789999983   5678888866     57899987554    345678899999999999995    358999999


Q ss_pred             CCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCC---Ceee
Q psy17610        400 DGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCD---GSII  476 (515)
Q Consensus       400 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~---~~~~  476 (515)
                      || |+||.+......................-.....+..|.+.+..+.|.-.|..|++.+.||.||+|...-   .++.
T Consensus       248 Dg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWkany~n~~kC~  326 (361)
T KOG2445|consen  248 DG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKANYNNLWKCT  326 (361)
T ss_pred             Cc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeecCCCceeeehhhhhhhhheee
Confidence            99 9999998644322211111111111111112223567889999999999999999999999999997532   2444


Q ss_pred             eeecc
Q psy17610        477 RSLEG  481 (515)
Q Consensus       477 ~~~~~  481 (515)
                      ..+..
T Consensus       327 sv~~~  331 (361)
T KOG2445|consen  327 SVLKA  331 (361)
T ss_pred             eEEec
Confidence            44443

>KOG0267|consensus

Probab=99.94  E-value=4.3e-27  Score=211.17  Aligned_cols=235  Identities=19%  Similarity=0.271  Sum_probs=210.5

Q ss_pred             ecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCc
Q psy17610         78 LKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLN  157 (515)
Q Consensus        78 ~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~  157 (515)
                      ..|...|.|+..-..++.+++|+.|..+-+|.......+. .+.+|..+|.++.|+++...|++++.+|+|++||++.++
T Consensus        25 ~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i~-S~~~hespIeSl~f~~~E~LlaagsasgtiK~wDleeAk  103 (825)
T KOG0267|consen   25 VAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAIT-SLTGHESPIESLTFDTSERLLAAGSASGTIKVWDLEEAK  103 (825)
T ss_pred             hhhhhhhceeeeeccceeeccCCCceeeccccccCCchhh-eeeccCCcceeeecCcchhhhcccccCCceeeeehhhhh
Confidence            3588899999987788999999999999999987643333 468899999999999998888889999999999999999


Q ss_pred             eeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEE
Q psy17610        158 ELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWK  237 (515)
Q Consensus       158 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~  237 (515)
                      .++++.+|...+..+.|+|-+.+.+.|+.|+.+.+||.+...+...+ .+|...+..+.|+|+|++++.|++|..+++||
T Consensus       104 ~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~-~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d  182 (825)
T KOG0267|consen  104 IVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTY-KSHTRVVDVLRLSPDGRWVASGGEDNTVKIWD  182 (825)
T ss_pred             hhhhhhccccCcceeeeccceEEeccccccccceehhhhccCceeee-cCCcceeEEEeecCCCceeeccCCcceeeeec
Confidence            99999999999999999999999999999999999999988888888 57999999999999999999999999999999


Q ss_pred             ccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEc-CccEEEEEEcCCCcEEEEEECCC
Q psy17610        238 LTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMIL-PSMIMSAAYHPSEVQLITCSTNK  316 (515)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~  316 (515)
                      .  ..++....+..|...+..+.|+|..-++.+|+.|+++++||+++.+.+..... ...+.+.+|+|++..+++|....
T Consensus       183 ~--~agk~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletfe~I~s~~~~~~~v~~~~fn~~~~~~~~G~q~s  260 (825)
T KOG0267|consen  183 L--TAGKLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETFEVISSGKPETDGVRSLAFNPDGKIVLSGEQIS  260 (825)
T ss_pred             c--cccccccccccccccccccccCchhhhhccCCCCceeeeeccceeEEeeccCCccCCceeeeecCCceeeecCchhh
Confidence            9  45667788899999999999999999999999999999999998877765543 35799999999999988876543

>KOG0321|consensus

Probab=99.94  E-value=1.1e-24  Score=192.98  Aligned_cols=284  Identities=15%  Similarity=0.213  Sum_probs=212.0

Q ss_pred             EEeCC--CCc-EEEEEecCCcEEEEeCCCCce------eEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCce
Q psy17610        130 LQFPV--NFS-SVFATCSKNDIRIWSVRTLNE------LLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKL  200 (515)
Q Consensus       130 ~~~~~--~~~-~l~~~~~d~~i~iw~~~~~~~------~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~  200 (515)
                      ..|++  +.+ .|+.+..||.|.++|.+....      +.....|...|..+.|.|....|++++.|.++++||++++++
T Consensus        55 ~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l  134 (720)
T KOG0321|consen   55 DSFSAAPNKEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRL  134 (720)
T ss_pred             ccccCCCCccceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeecccee
Confidence            55643  333 455555699999999875332      355668999999999999777899999999999999999988


Q ss_pred             EEE-ecCCCCCCeEEEEEcC-CCCEEEEecCCCcEEEEEccCCce-------------------------eeEEeecccc
Q psy17610        201 KFI-IPNAHNRGVTALAITQ-DGTRLLSGGGEGQVRIWKLTRESQ-------------------------SLQCVLKEHT  253 (515)
Q Consensus       201 ~~~-~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~~-------------------------~~~~~~~~~~  253 (515)
                      ... +..+|...|.+++|.| +...|++|+.||.|.|||++-...                         +.......+.
T Consensus       135 ~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s  214 (720)
T KOG0321|consen  135 VGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAAS  214 (720)
T ss_pred             ecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhcccccccccc
Confidence            765 2369999999999999 556889999999999999863220                         0111122344


Q ss_pred             CceEE---EEEecCCCEEEEEeC-CCcEEEEEcccceEEEEEEc--------C----ccEEEEEEcCCCcEEEEEECCCe
Q psy17610        254 SSVSV---IQIKSDSKEAMSAST-DGTCVLWDLIKSTRLIIMIL--------P----SMIMSAAYHPSEVQLITCSTNKM  317 (515)
Q Consensus       254 ~~v~~---~~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~--------~----~~~~~~~~~~~~~~l~~~~~~~~  317 (515)
                      ..|.+   +.+..|...|++++. |+.|++||++..........        +    ..+.++.....|.+|++.+.|+.
T Consensus       215 ~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~s  294 (720)
T KOG0321|consen  215 NTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNS  294 (720)
T ss_pred             CceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCc
Confidence            44544   555678889999888 99999999987654332211        1    24778888888999999999999


Q ss_pred             EEEEeCCCCc--eEEEEecCCCccE-EEEEEcCCCCEEEEEcCCCeEEEEEccCCe-eeeeccCCCCCeeEEEECCC-Cc
Q psy17610        318 IDYWETCDGS--IIRSLEGSDVAAV-NCVDFVDDGKYFLTGGADQIVKMWMYREGV-PCFVGIGHAASITKIKISPD-KK  392 (515)
Q Consensus       318 i~~~d~~~~~--~~~~~~~~~~~~i-~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~i~~~~~~~~-~~  392 (515)
                      |++|++.+..  ++..+.++..... ..-..+|++.++++|+.|...++|.+.+.+ ....+.+|...|++++|.|. -.
T Consensus       295 Iy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~pS~~t  374 (720)
T KOG0321|consen  295 IYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEAPPALLLGHTREVTTVRWLPSATT  374 (720)
T ss_pred             EEEEeccccCcCchhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCccCChhhhhCcceEEEEEeeccccCC
Confidence            9999987643  3333333221111 123578999999999999999999998753 45667899999999999983 34


Q ss_pred             EEEEEeCCCcEEEEeCCCCcC
Q psy17610        393 VIVSVSADGGIFLWTFPELED  413 (515)
Q Consensus       393 ~l~~~~~dg~i~iw~~~~~~~  413 (515)
                      -+++++.|-.+++|++.....
T Consensus       375 ~v~TcSdD~~~kiW~l~~~l~  395 (720)
T KOG0321|consen  375 PVATCSDDFRVKIWRLSNGLE  395 (720)
T ss_pred             CceeeccCcceEEEeccCchh
Confidence            577889999999999966543

>KOG0267|consensus

Probab=99.94  E-value=7.7e-27  Score=209.55  Aligned_cols=255  Identities=19%  Similarity=0.327  Sum_probs=225.4

Q ss_pred             CEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEE
Q psy17610         94 NKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIV  173 (515)
Q Consensus        94 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~  173 (515)
                      .+++.....-.+++|+...       +..|...+.++..-..++.+++++.|..+-+|.+.....+..+.+|..+|.++.
T Consensus         5 ~~~m~~~~~t~Lr~~~~~~-------~~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i~S~~~hespIeSl~   77 (825)
T KOG0267|consen    5 EFLMKTKRATKLRVWDTRE-------FVAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAITSLTGHESPIESLT   77 (825)
T ss_pred             cccceeeeeeccccccchh-------hhhhhhhhceeeeeccceeeccCCCceeeccccccCCchhheeeccCCcceeee
Confidence            3444455555677787654       234888898888866778888888899999999988888888999999999999


Q ss_pred             EeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeecccc
Q psy17610        174 FTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHT  253 (515)
Q Consensus       174 ~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~  253 (515)
                      |+++..+|++|+.+|+|++||++.++.+..+ .+|...+.++.|+|-+.+++.|+.|+.+++||.+  ...+...+.+|.
T Consensus        78 f~~~E~LlaagsasgtiK~wDleeAk~vrtL-tgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~R--k~Gc~~~~~s~~  154 (825)
T KOG0267|consen   78 FDTSERLLAAGSASGTIKVWDLEEAKIVRTL-TGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIR--KKGCSHTYKSHT  154 (825)
T ss_pred             cCcchhhhcccccCCceeeeehhhhhhhhhh-hccccCcceeeeccceEEeccccccccceehhhh--ccCceeeecCCc
Confidence            9999999999999999999999999988888 7999999999999999999999999999999994  455677888899


Q ss_pred             CceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEE-cCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEE
Q psy17610        254 SSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMI-LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSL  332 (515)
Q Consensus       254 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~  332 (515)
                      ..+..+.|+|+|++++.+++|.++++||+..++....+. +...+..+.++|..-.++.|+.|+++++||+++.+.+...
T Consensus       155 ~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletfe~I~s~  234 (825)
T KOG0267|consen  155 RVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETFEVISSG  234 (825)
T ss_pred             ceeEEEeecCCCceeeccCCcceeeeecccccccccccccccccccccccCchhhhhccCCCCceeeeeccceeEEeecc
Confidence            999999999999999999999999999999999998887 5568999999999999999999999999999998888887


Q ss_pred             ecCCCccEEEEEEcCCCCEEEEEcCCC
Q psy17610        333 EGSDVAAVNCVDFVDDGKYFLTGGADQ  359 (515)
Q Consensus       333 ~~~~~~~i~~~~~~~~~~~l~~~~~dg  359 (515)
                      .... ..|.+.+|+|++..+++|....
T Consensus       235 ~~~~-~~v~~~~fn~~~~~~~~G~q~s  260 (825)
T KOG0267|consen  235 KPET-DGVRSLAFNPDGKIVLSGEQIS  260 (825)
T ss_pred             CCcc-CCceeeeecCCceeeecCchhh
Confidence            7664 8999999999999999887653

>KOG1034|consensus

Probab=99.94  E-value=9.6e-25  Score=178.14  Aligned_cols=332  Identities=17%  Similarity=0.224  Sum_probs=224.1

Q ss_pred             eeccCccCeEEEEeCC----CCcEEEEEecCCcEEEEeCCCCce---eEEEE--ecCeEEEEEEEeeCC----CEEEEEe
Q psy17610        119 VNTCHTSAIYDLQFPV----NFSSVFATCSKNDIRIWSVRTLNE---LLRIS--VMNMICACIVFTYDG----KAILSGW  185 (515)
Q Consensus       119 ~~~~h~~~v~~~~~~~----~~~~l~~~~~d~~i~iw~~~~~~~---~~~~~--~~~~~v~~~~~~~~~----~~l~~~~  185 (515)
                      +...|..+|..++|++    +...+++....+.+.++.......   ++.+.  .+......++|+-+.    .++|+++
T Consensus        33 l~ed~~~~I~gv~fN~~~~~~e~~vfatvG~~rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~~G  112 (385)
T KOG1034|consen   33 LKEDHNKPIFGVAFNSFLGCDEPQVFATVGGNRVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNTGNPFLAAGG  112 (385)
T ss_pred             hhccCCCccceeeeehhcCCCCCceEEEeCCcEEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCCCCeeEEeec
Confidence            4556889999999974    456777777788899998765432   23322  245566778887643    4788999


Q ss_pred             CCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCC-CCEEEEecCCCcEEEEEccCCceeeEEe---eccccCceEEEEE
Q psy17610        186 NDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQD-GTRLLSGGGEGQVRIWKLTRESQSLQCV---LKEHTSSVSVIQI  261 (515)
Q Consensus       186 ~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iw~~~~~~~~~~~~---~~~~~~~v~~~~~  261 (515)
                      .-|.|++.|+.+++....+ .+|...|+.+.+.|+ .+++++++.|..|++|+++  +..++..   ..+|.+.|.++.|
T Consensus       113 ~~GvIrVid~~~~~~~~~~-~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~--~~~Cv~VfGG~egHrdeVLSvD~  189 (385)
T KOG1034|consen  113 YLGVIRVIDVVSGQCSKNY-RGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQ--TDVCVAVFGGVEGHRDEVLSVDF  189 (385)
T ss_pred             ceeEEEEEecchhhhccce-eccCccchhhhcCCCCCcEEEEecCCceEEEEecc--CCeEEEEecccccccCcEEEEEE
Confidence            9999999999999998888 799999999999994 5789999999999999995  4444444   4679999999999


Q ss_pred             ecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEE
Q psy17610        262 KSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVN  341 (515)
Q Consensus       262 ~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~  341 (515)
                      ++++.++++++.|.++++|++...+....++..     ..|+|++                                   
T Consensus       190 ~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s-----~~~~~~~-----------------------------------  229 (385)
T KOG1034|consen  190 SLDGDRIASCGMDHSLKLWRLNVKEFKNKLELS-----ITYSPNK-----------------------------------  229 (385)
T ss_pred             cCCCCeeeccCCcceEEEEecChhHHhhhhhhh-----cccCCCC-----------------------------------
Confidence            999999999999999999998754322211111     2222221                                   


Q ss_pred             EEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCccc
Q psy17610        342 CVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSL  421 (515)
Q Consensus       342 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~  421 (515)
                              ...-.-  .....+.+..      +-.-|...|.|+.|-  |+++++-+-++.|..|.....++........
T Consensus       230 --------t~~pfp--t~~~~fp~fs------t~diHrnyVDCvrw~--gd~ilSkscenaI~~w~pgkl~e~~~~vkp~  291 (385)
T KOG1034|consen  230 --------TTRPFP--TPKTHFPDFS------TTDIHRNYVDCVRWF--GDFILSKSCENAIVCWKPGKLEESIHNVKPP  291 (385)
T ss_pred             --------ccCcCC--cccccccccc------ccccccchHHHHHHH--hhheeecccCceEEEEecchhhhhhhccCCC
Confidence                    110000  0001111111      123467777777773  4677777777788888764333221111110


Q ss_pred             ceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeee--ee-cccccceEEEEEEcCCCcE
Q psy17610        422 SSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIR--SL-EGSDVAAVNCVDFVDDGKY  498 (515)
Q Consensus       422 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~--~~-~~~~~~~v~~~~~s~~~~~  498 (515)
                      .....    .-.......-.-+....+|.|-+++||.|...|.|++||++..++..  ++ .......|...+|+.||..
T Consensus       292 es~~T----i~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs~  367 (385)
T KOG1034|consen  292 ESATT----ILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSGKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSFSRDGSI  367 (385)
T ss_pred             cccee----eeeEeccCccceEEEEEeecHHHHHHhhccCCCcEEEEECCCCCCccCceEEeccccceeeeeeecccCcE
Confidence            00000    00000011111234456777889999999999999999998876531  11 1122367999999999999


Q ss_pred             EEEeecCCeEEEEEEeC
Q psy17610        499 FLTGGADQIVKICLYIA  515 (515)
Q Consensus       499 l~s~~~dg~v~iw~~~~  515 (515)
                      |+...+|++|--||.+.
T Consensus       368 lv~vcdd~~Vwrwdrv~  384 (385)
T KOG1034|consen  368 LVLVCDDGTVWRWDRVS  384 (385)
T ss_pred             EEEEeCCCcEEEEEeec
Confidence            99999999999999863

>KOG2919|consensus

Probab=99.93  E-value=9.2e-24  Score=172.10  Aligned_cols=277  Identities=17%  Similarity=0.188  Sum_probs=209.2

Q ss_pred             CeEEEEEcCCCCEEEEecCCCcEEEEEccCCce----------eeEEeec-cccCceEEEEEe-------cCCCEEEEEe
Q psy17610        211 GVTALAITQDGTRLLSGGGEGQVRIWKLTRESQ----------SLQCVLK-EHTSSVSVIQIK-------SDSKEAMSAS  272 (515)
Q Consensus       211 ~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~----------~~~~~~~-~~~~~v~~~~~~-------~~~~~l~~~~  272 (515)
                      -.....|+|||..|++-+.|..+.+|++.....          .....+. .....|...+|-       |+..++++.+
T Consensus        51 f~kgckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~ss  130 (406)
T KOG2919|consen   51 FLKGCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVSS  130 (406)
T ss_pred             hhccceeCCCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeecc
Confidence            345779999999999999999999999852210          0000111 123345666664       6778899999


Q ss_pred             CCCcEEEEEcccceEEEEEEcC------ccEEEEEEcCCCcEEEEEECCCeEEEEeC-CCCceEEEE------ecCCCcc
Q psy17610        273 TDGTCVLWDLIKSTRLIIMILP------SMIMSAAYHPSEVQLITCSTNKMIDYWET-CDGSIIRSL------EGSDVAA  339 (515)
Q Consensus       273 ~d~~i~iwd~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~~~~~~~i~~~d~-~~~~~~~~~------~~~~~~~  339 (515)
                      .+.-|++||.-+++....+..-      ....+++|+|||..|++| .+..|++||+ +.|..-...      +....+.
T Consensus       131 r~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaG-ykrcirvFdt~RpGr~c~vy~t~~~~k~gq~gi  209 (406)
T KOG2919|consen  131 RDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAG-YKRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGI  209 (406)
T ss_pred             ccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeec-ccceEEEeeccCCCCCCcchhhhhcccccccce
Confidence            9999999999999877665432      246889999999999877 5678999998 555322111      1122367


Q ss_pred             EEEEEEcC-CCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeC-CCcEEEEeCCCCcCccCC
Q psy17610        340 VNCVDFVD-DGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSA-DGGIFLWTFPELEDDVGD  417 (515)
Q Consensus       340 i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~  417 (515)
                      +.|++|+| +.+.+++|+....+-||.-..+.++..+-+|.+.|+.+.|.++|+.|++|.. |..|..||++......-.
T Consensus       210 isc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~  289 (406)
T KOG2919|consen  210 ISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVYA  289 (406)
T ss_pred             eeeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchhhh
Confidence            89999999 5669999999999999999899999999999999999999999999999976 778999999875432211


Q ss_pred             CcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCC-CeeeeeecccccceEEEEEEcCCC
Q psy17610        418 SRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCD-GSIIRSLEGSDVAAVNCVDFVDDG  496 (515)
Q Consensus       418 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~-~~~~~~~~~~~~~~v~~~~~s~~~  496 (515)
                      ....       ..         ....-.-+...|++++|++|+.||.|++||+++ |..+..+..+. .-++.++++|--
T Consensus       290 L~rh-------v~---------~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~~~~s-d~vNgvslnP~m  352 (406)
T KOG2919|consen  290 LERH-------VG---------DTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGNEVSVTGNYS-DTVNGVSLNPIM  352 (406)
T ss_pred             hhhh-------cc---------CccceEEEecCCCCceeeccCCCccEEEEecCCCCCccccccccc-ccccceecCccc
Confidence            1110       00         001122356679999999999999999999998 77777887776 889999999998


Q ss_pred             cEEEEeecC
Q psy17610        497 KYFLTGGAD  505 (515)
Q Consensus       497 ~~l~s~~~d  505 (515)
                      .++++++..
T Consensus       353 pilatssGq  361 (406)
T KOG2919|consen  353 PILATSSGQ  361 (406)
T ss_pred             ceeeeccCc
Confidence            888887654

>KOG0269|consensus

Probab=99.93  E-value=1.5e-25  Score=202.85  Aligned_cols=237  Identities=16%  Similarity=0.195  Sum_probs=186.9

Q ss_pred             CCceEEEecCCCCeEEEEcCCCCCCcccccccceEEeeccccccccccccccccccCcceeeeccceEEEEEecCCCcEE
Q psy17610          6 NDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMGCYGKLIKKKVSTKLKDVNAEDVSLYSAGVTALYLLKDDSGIS   85 (515)
Q Consensus         6 ~~~~~~~g~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~   85 (515)
                      +.++|++.+.+|.|.+||++..-                                         +......+..|...++
T Consensus        99 ~~NlIAT~s~nG~i~vWdlnk~~-----------------------------------------rnk~l~~f~EH~Rs~~  137 (839)
T KOG0269|consen   99 YSNLIATCSTNGVISVWDLNKSI-----------------------------------------RNKLLTVFNEHERSAN  137 (839)
T ss_pred             hhhhheeecCCCcEEEEecCccc-----------------------------------------cchhhhHhhhhcccee
Confidence            45678888999999999988520                                         0011123446999999


Q ss_pred             EEEEec-CCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCC-CcEEEEEecCCcEEEEeCCCC-ceeEEE
Q psy17610         86 SLQYNP-VNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVN-FSSVFATCSKNDIRIWSVRTL-NELLRI  162 (515)
Q Consensus        86 ~~~~s~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~~~~~d~~i~iw~~~~~-~~~~~~  162 (515)
                      ++.|++ .-.+|++|+.||.|++||+... .-...+.+....|..+.|+|. +..++++...|.+++||++.. ++...+
T Consensus       138 ~ldfh~tep~iliSGSQDg~vK~~DlR~~-~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~  216 (839)
T KOG0269|consen  138 KLDFHSTEPNILISGSQDGTVKCWDLRSK-KSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKL  216 (839)
T ss_pred             eeeeccCCccEEEecCCCceEEEEeeecc-cccccccccchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHh
Confidence            999999 5678899999999999999984 444455568889999999995 456666677899999999864 467778


Q ss_pred             EecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCC-EEEEec--CCCcEEEEEcc
Q psy17610        163 SVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGT-RLLSGG--GEGQVRIWKLT  239 (515)
Q Consensus       163 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~--~d~~i~iw~~~  239 (515)
                      ..|.++|.|+.|+|++.+||+|++|+.|+|||..+.+......-....++.++.|-|... .|++++  .|-.|+|||++
T Consensus       217 ~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~~~tInTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvr  296 (839)
T KOG0269|consen  217 TAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAKPKHTINTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVR  296 (839)
T ss_pred             hcccCceEEEeecCCCceeeecCCCccEEEEeccCCCccceeEEeecceeeeeeeccCccchhhhhhccccceEEEEeec
Confidence            899999999999999999999999999999999876654333234567899999999654 566554  47899999998


Q ss_pred             CCceeeEEeeccccCceEEEEEec-CCCEEEEEeCCCcEEEEEcccc
Q psy17610        240 RESQSLQCVLKEHTSSVSVIQIKS-DSKEAMSASTDGTCVLWDLIKS  285 (515)
Q Consensus       240 ~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~  285 (515)
                      . ...+...+..|...++.++|.. |...+.+++.||++..-.+++.
T Consensus       297 R-PYIP~~t~~eH~~~vt~i~W~~~d~~~l~s~sKD~tv~qh~~kna  342 (839)
T KOG0269|consen  297 R-PYIPYATFLEHTDSVTGIAWDSGDRINLWSCSKDGTVLQHLFKNA  342 (839)
T ss_pred             c-ccccceeeeccCccccceeccCCCceeeEeecCccHHHHhhhhcc
Confidence            4 4566778889999999999965 5567889999998876655544

>KOG4378|consensus

Probab=99.93  E-value=6.5e-24  Score=182.71  Aligned_cols=289  Identities=14%  Similarity=0.133  Sum_probs=220.3

Q ss_pred             EEeCCCeEEEEecCCCceEEEecCCC--CCCeEEEEEcCCCC-EEEEecCCCcEEEEEccCCcee--eEEeeccccCceE
Q psy17610        183 SGWNDGFIRCFTPQSGKLKFIIPNAH--NRGVTALAITQDGT-RLLSGGGEGQVRIWKLTRESQS--LQCVLKEHTSSVS  257 (515)
Q Consensus       183 ~~~~dg~i~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~-~l~~~~~d~~i~iw~~~~~~~~--~~~~~~~~~~~v~  257 (515)
                      +++....+++||....+....+. .|  ...+.++.|..... .+++.+.|..+++|.-......  ......+  ..-.
T Consensus         7 ~aS~gd~~kl~D~s~~~~~~~~~-~~t~~pg~~s~~w~~~n~lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~g--d~~~   83 (673)
T KOG4378|consen    7 VASTGDKTKLSDFSDLETKSEYV-HQTAEPGDFSFNWQRRNFLVVASMAGDKVMRIKEKDGKTPEVPRVRKLTG--DNAF   83 (673)
T ss_pred             eeccCCceEEeecccccCccccc-cCCCCCcceeeeccccceEEEeecCCceeEEEecccCCCCccceeecccc--chHH
Confidence            34444569999998766554442 22  23488999987653 2334457888999986533222  2222222  2344


Q ss_pred             EEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEc-CccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCC
Q psy17610        258 VIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMIL-PSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSD  336 (515)
Q Consensus       258 ~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~  336 (515)
                      |++......++++++..+.|+|||++...+.+.+.. ...|+++.++-...++++++..|.|.+..+.++....++....
T Consensus        84 Cv~~~s~S~y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~s  163 (673)
T KOG4378|consen   84 CVACASQSLYEISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDS  163 (673)
T ss_pred             HHhhhhcceeeeccCcCceeeehhhHHHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCC
Confidence            555555668999999999999999996666555544 4579999999999999999999999999999999888888776


Q ss_pred             CccEEEEEEcCCCCE-EEEEcCCCeEEEEEccCCeeeee-ccCCCCCeeEEEECC-CCcEEEEEeCCCcEEEEeCCCCcC
Q psy17610        337 VAAVNCVDFVDDGKY-FLTGGADQIVKMWMYREGVPCFV-GIGHAASITKIKISP-DKKVIVSVSADGGIFLWTFPELED  413 (515)
Q Consensus       337 ~~~i~~~~~~~~~~~-l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~~  413 (515)
                      ...++-+.|+|..++ |.+++.+|.|.+||+....+... ...|..+...++|+| +..+|++.+.|..|.+||......
T Consensus       164 gqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s  243 (673)
T KOG4378|consen  164 GQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQAS  243 (673)
T ss_pred             CCeEEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeecccccc
Confidence            677889999997664 56788999999999988777654 468999999999999 567888999999999999875321


Q ss_pred             ccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCC-eeeeeecccccceEEEEEE
Q psy17610        414 DVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDG-SIIRSLEGSDVAAVNCVDF  492 (515)
Q Consensus       414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~-~~~~~~~~~~~~~v~~~~~  492 (515)
                      .                     .......+...++|+++|.+|++|+..|.|..||+... .++.++..|. ..|++++|
T Consensus       244 ~---------------------~~l~y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~Pv~v~sah~-~sVt~vaf  301 (673)
T KOG4378|consen  244 T---------------------DRLTYSHPLSTVAFSECGTYLCAGNSKGELIAYDMRSTKAPVAVRSAHD-ASVTRVAF  301 (673)
T ss_pred             c---------------------ceeeecCCcceeeecCCceEEEeecCCceEEEEecccCCCCceEeeecc-cceeEEEe
Confidence            0                     01112345889999999999999999999999999764 5678888887 78999999


Q ss_pred             cCCC
Q psy17610        493 VDDG  496 (515)
Q Consensus       493 s~~~  496 (515)
                      -|..
T Consensus       302 q~s~  305 (673)
T KOG4378|consen  302 QPSP  305 (673)
T ss_pred             eecc
Confidence            8764

>KOG4378|consensus

Probab=99.93  E-value=5.3e-24  Score=183.27  Aligned_cols=265  Identities=11%  Similarity=0.107  Sum_probs=209.5

Q ss_pred             CcEEEEEEecCCCEEEEE--ecCceEEEEECCCCc-eeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCce
Q psy17610         82 SGISSLQYNPVNNKVFVG--TVNCEIFLIDMNSGF-TLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNE  158 (515)
Q Consensus        82 ~~v~~~~~s~~~~~l~~~--~~d~~i~iw~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~  158 (515)
                      ..+.++.|+.... |+++  +.|..+++|.-.... .+..+.......-.|++......++++++..+.|+|||++...+
T Consensus        35 pg~~s~~w~~~n~-lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~gd~~~Cv~~~s~S~y~~sgG~~~~Vkiwdl~~kl~  113 (673)
T KOG4378|consen   35 PGDFSFNWQRRNF-LVVASMAGDKVMRIKEKDGKTPEVPRVRKLTGDNAFCVACASQSLYEISGGQSGCVKIWDLRAKLI  113 (673)
T ss_pred             Ccceeeeccccce-EEEeecCCceeEEEecccCCCCccceeeccccchHHHHhhhhcceeeeccCcCceeeehhhHHHHH
Confidence            3488999987654 4444  457788888755320 11111111222344555544557999999999999999997777


Q ss_pred             eEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCE-EEEecCCCcEEEEE
Q psy17610        159 LLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTR-LLSGGGEGQVRIWK  237 (515)
Q Consensus       159 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~iw~  237 (515)
                      .+.+..|...|+++.++....+||+++..|.|.+..+.++.....+..+....|.-+.|+|..+. |.+++.+|.|.+||
T Consensus       114 hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwD  193 (673)
T KOG4378|consen  114 HRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWD  193 (673)
T ss_pred             hhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCCCCeEEEeecccccceeeEeeccCCeEEEEe
Confidence            88889999999999999999999999999999999999988777774444566779999996654 55789999999999


Q ss_pred             ccCCceeeEEeeccccCceEEEEEecCC-CEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCC
Q psy17610        238 LTRESQSLQCVLKEHTSSVSVIQIKSDS-KEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNK  316 (515)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  316 (515)
                      +... .+.......|..+...++|+|.. .+|++.+.|..|.+||.........+....+...++|.++|.+|++|...|
T Consensus       194 v~g~-sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l~y~~Plstvaf~~~G~~L~aG~s~G  272 (673)
T KOG4378|consen  194 VQGM-SPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRLTYSHPLSTVAFSECGTYLCAGNSKG  272 (673)
T ss_pred             ccCC-CcccchhhhccCCcCcceecCCccceEEEecccceEEEeecccccccceeeecCCcceeeecCCceEEEeecCCc
Confidence            9633 33444567899999999999965 467789999999999999988888888999999999999999999999999


Q ss_pred             eEEEEeCCCCc-eEEEEecCCCccEEEEEEcCCC
Q psy17610        317 MIDYWETCDGS-IIRSLEGSDVAAVNCVDFVDDG  349 (515)
Q Consensus       317 ~i~~~d~~~~~-~~~~~~~~~~~~i~~~~~~~~~  349 (515)
                      .|..||++..+ ++..+..|. ..|++++|-|..
T Consensus       273 ~~i~YD~R~~k~Pv~v~sah~-~sVt~vafq~s~  305 (673)
T KOG4378|consen  273 ELIAYDMRSTKAPVAVRSAHD-ASVTRVAFQPSP  305 (673)
T ss_pred             eEEEEecccCCCCceEeeecc-cceeEEEeeecc
Confidence            99999999765 455555555 789999998764

>KOG1009|consensus

Probab=99.93  E-value=3.2e-23  Score=174.15  Aligned_cols=324  Identities=16%  Similarity=0.245  Sum_probs=223.0

Q ss_pred             CccCeEEEEeCCCCc-EEEEEecCCcEEEEeCCCCc---------eeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEE
Q psy17610        123 HTSAIYDLQFPVNFS-SVFATCSKNDIRIWSVRTLN---------ELLRISVMNMICACIVFTYDGKAILSGWNDGFIRC  192 (515)
Q Consensus       123 h~~~v~~~~~~~~~~-~l~~~~~d~~i~iw~~~~~~---------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~  192 (515)
                      ...+|..+.|.++.. .+++++.|..|++|.+..+.         .+..+..|...|+++.|+|+|+.|++|+.+|.+.+
T Consensus        12 ~~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~l   91 (434)
T KOG1009|consen   12 DHEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFL   91 (434)
T ss_pred             CCCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEE
Confidence            345799999998876 89999999999999887543         23456689999999999999999999999999999


Q ss_pred             EecC--------C-----C--ceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceE
Q psy17610        193 FTPQ--------S-----G--KLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVS  257 (515)
Q Consensus       193 ~~~~--------~-----~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~  257 (515)
                      |...        +     .  -.+.....+|...|..++|+|++.++++++.|..+++||+  ..+.....+..|...+.
T Consensus        92 Wk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv--~~G~l~~~~~dh~~yvq  169 (434)
T KOG1009|consen   92 WKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDV--HAGQLLAILDDHEHYVQ  169 (434)
T ss_pred             EEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEe--ccceeEeeccccccccc
Confidence            9765        2     1  1233344789999999999999999999999999999999  56778888999999999


Q ss_pred             EEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCC
Q psy17610        258 VIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDV  337 (515)
Q Consensus       258 ~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~  337 (515)
                      .++|.|-++++++-+.|...+.+.+...+........ ....-+.++.        .....++|.-++.+          
T Consensus       170 gvawDpl~qyv~s~s~dr~~~~~~~~~~~~~~~~~~~-~m~~~~~~~~--------e~~s~rLfhDeTlk----------  230 (434)
T KOG1009|consen  170 GVAWDPLNQYVASKSSDRHPEGFSAKLKQVIKRHGLD-IMPAKAFNER--------EGKSTRLFHDETLK----------  230 (434)
T ss_pred             eeecchhhhhhhhhccCcccceeeeeeeeeeeeeeee-EeeecccCCC--------CcceeeeeecCchh----------
Confidence            9999999999999999987777776555444333220 0111111111        11122333222211          


Q ss_pred             ccEEEEEEcCCCCEEEEEcC----CC-----eEEEEEccC-CeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEe
Q psy17610        338 AAVNCVDFVDDGKYFLTGGA----DQ-----IVKMWMYRE-GVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWT  407 (515)
Q Consensus       338 ~~i~~~~~~~~~~~l~~~~~----dg-----~i~i~d~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~  407 (515)
                      .-...++|+|+|.+|++...    .+     ..++|+-.. .++...+.....+...+.|+|              ..|.
T Consensus       231 sFFrRlsfTPdG~llvtPag~~~~g~~~~~n~tYvfsrk~l~rP~~~lp~~~k~~lavr~~p--------------Vy~e  296 (434)
T KOG1009|consen  231 SFFRRLSFTPDGSLLVTPAGLFKVGGGVFRNTSYVFSRKDLKRPAARLPSPKKPALAVRFSP--------------VYYE  296 (434)
T ss_pred             hhhhhcccCCCCcEEEcccceeeeCCceeeceeEeeccccccCceeecCCCCcceEEEEeee--------------eEEE
Confidence            33456789999998887642    11     223332211 133333444444444444443              1222


Q ss_pred             CCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceE
Q psy17610        408 FPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAV  487 (515)
Q Consensus       408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v  487 (515)
                      +.......                            .  +.--|-+-.+|.++ ...|++||.++-+++....+-|-.+|
T Consensus       297 lrp~~~~~----------------------------~--~~~lpyrlvfaiAt-~~svyvydtq~~~P~~~v~nihy~~i  345 (434)
T KOG1009|consen  297 LRPLSSEK----------------------------F--LFVLPYRLVFAIAT-KNSVYVYDTQTLEPLAVVDNIHYSAI  345 (434)
T ss_pred             eccccccc----------------------------c--ccccccceEEEEee-cceEEEeccccccceEEEeeeeeeee
Confidence            22211000                            0  11123344455555 55699999999999999888777999


Q ss_pred             EEEEEcCCCcEEEEeecCCeEEEEE
Q psy17610        488 NCVDFVDDGKYFLTGGADQIVKICL  512 (515)
Q Consensus       488 ~~~~~s~~~~~l~s~~~dg~v~iw~  512 (515)
                      +.++|++||..|+..+.||...+-.
T Consensus       346 TDiaws~dg~~l~vSS~DGyCS~vt  370 (434)
T KOG1009|consen  346 TDIAWSDDGSVLLVSSTDGFCSLVT  370 (434)
T ss_pred             cceeecCCCcEEEEeccCCceEEEE
Confidence            9999999999999999999876544

>KOG2445|consensus

Probab=99.93  E-value=3.7e-23  Score=167.45  Aligned_cols=244  Identities=14%  Similarity=0.199  Sum_probs=191.3

Q ss_pred             ecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCc----eEEEecCCCCCCeEEEEEcC--CCCEEEEecCCCcEEEEE
Q psy17610        164 VMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGK----LKFIIPNAHNRGVTALAITQ--DGTRLLSGGGEGQVRIWK  237 (515)
Q Consensus       164 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~----~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~iw~  237 (515)
                      +|.+-|.++.|.+.|+++++++.|++++|||.+...    +.... +.|.+.|..+.|.+  -|+.+|+++.|+++.||.
T Consensus        11 ~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~W-rah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWE   89 (361)
T KOG2445|consen   11 GHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSW-RAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWE   89 (361)
T ss_pred             CCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeE-EecCCcEEEEEecCccccceEEEEecCCceeeee
Confidence            577889999999999999999999999999965432    33444 68999999999976  589999999999999997


Q ss_pred             ccC-------CceeeEEeeccccCceEEEEEecC--CCEEEEEeCCCcEEEEEcccceEEEE------EE--------cC
Q psy17610        238 LTR-------ESQSLQCVLKEHTSSVSVIQIKSD--SKEAMSASTDGTCVLWDLIKSTRLII------MI--------LP  294 (515)
Q Consensus       238 ~~~-------~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~------~~--------~~  294 (515)
                      -..       .......++......|+.+.|.|.  |-.+++++.||.++||+....-.+..      +.        ..
T Consensus        90 E~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~  169 (361)
T KOG2445|consen   90 EQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNK  169 (361)
T ss_pred             ecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCccccc
Confidence            521       123445567778889999999985  67799999999999998755432222      11        22


Q ss_pred             ccEEEEEEcCC---CcEEEEEECC-----CeEEEEeCCCC----ceEEEEecCCCccEEEEEEcCC----CCEEEEEcCC
Q psy17610        295 SMIMSAAYHPS---EVQLITCSTN-----KMIDYWETCDG----SIIRSLEGSDVAAVNCVDFVDD----GKYFLTGGAD  358 (515)
Q Consensus       295 ~~~~~~~~~~~---~~~l~~~~~~-----~~i~~~d~~~~----~~~~~~~~~~~~~i~~~~~~~~----~~~l~~~~~d  358 (515)
                      .+..++.|+|.   ..++++|+.+     +.+.||....+    ..+.++..+. .+|+.++|.|+    -.+||+++.|
T Consensus       170 ~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~-dpI~di~wAPn~Gr~y~~lAvA~kD  248 (361)
T KOG2445|consen  170 QPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHT-DPIRDISWAPNIGRSYHLLAVATKD  248 (361)
T ss_pred             CcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCC-CcceeeeeccccCCceeeEEEeecC
Confidence            35778889874   4677777765     46778865543    2445556554 89999999995    3579999999


Q ss_pred             CeEEEEEccCC--------------------eeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCC
Q psy17610        359 QIVKMWMYREG--------------------VPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPE  410 (515)
Q Consensus       359 g~i~i~d~~~~--------------------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~  410 (515)
                      | |+||.++..                    +.+..+.+|.+.|..+.|+-.|..|++.+.||.|++|...-
T Consensus       249 g-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWkany  319 (361)
T KOG2445|consen  249 G-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKANY  319 (361)
T ss_pred             c-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeecCCCceeeehhhhh
Confidence            9 999998731                    23456779999999999999999999999999999997643

>KOG0270|consensus

Probab=99.93  E-value=8.4e-24  Score=179.61  Aligned_cols=237  Identities=18%  Similarity=0.224  Sum_probs=183.1

Q ss_pred             CCCEEEEEecCceEEEEECCCC--ceeEE------------------eeccCccCeEEEEeCCCCcE-EEEEecCCcEEE
Q psy17610         92 VNNKVFVGTVNCEIFLIDMNSG--FTLTL------------------VNTCHTSAIYDLQFPVNFSS-VFATCSKNDIRI  150 (515)
Q Consensus        92 ~~~~l~~~~~d~~i~iw~~~~~--~~~~~------------------~~~~h~~~v~~~~~~~~~~~-l~~~~~d~~i~i  150 (515)
                      .|+++|.|+.|..|.|||+.--  -.+..                  .-.+|+..|.+++|+..-+. |++++.|.+|++
T Consensus       191 ~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~l  270 (463)
T KOG0270|consen  191 AGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKL  270 (463)
T ss_pred             CcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEE
Confidence            3689999999999999998521  01111                  12369999999999887654 555666999999


Q ss_pred             EeCCCCceeEEEEecCeEEEEEEEeeCC-CEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCC-CCEEEEec
Q psy17610        151 WSVRTLNELLRISVMNMICACIVFTYDG-KAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQD-GTRLLSGG  228 (515)
Q Consensus       151 w~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~  228 (515)
                      ||+.++++...+..|...|.++.|+|.. ..|++|+.|+++.+.|.+........ -.-.+.|..++|.|. ...++++.
T Consensus       271 WD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~-wk~~g~VEkv~w~~~se~~f~~~t  349 (463)
T KOG0270|consen  271 WDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKE-WKFDGEVEKVAWDPHSENSFFVST  349 (463)
T ss_pred             EEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCce-EEeccceEEEEecCCCceeEEEec
Confidence            9999999999999999999999999954 68899999999999999842221111 134578999999994 45677888


Q ss_pred             CCCcEEEEEccCCceeeEEeeccccCceEEEEEecCC-CEEEEEeCCCcEEEEEcccceEEEEEEcC---ccEEEEEEcC
Q psy17610        229 GEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDS-KEAMSASTDGTCVLWDLIKSTRLIIMILP---SMIMSAAYHP  304 (515)
Q Consensus       229 ~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~  304 (515)
                      .||+++-+|++.. .+++.++..|.++|.++++++.. .++++++.|+.|++|++..........+.   +...++++.|
T Consensus       350 ddG~v~~~D~R~~-~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~~~~~~~~rl~c~~~~~  428 (463)
T KOG0270|consen  350 DDGTVYYFDIRNP-GKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSVKEHSFKLGRLHCFALDP  428 (463)
T ss_pred             CCceEEeeecCCC-CCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCcccccccccccceeecccCC
Confidence            9999999999854 47888999999999999998754 56788999999999998755443332222   2366777777


Q ss_pred             CCc-EEEEEECCCeEEEEeCCCCceEE
Q psy17610        305 SEV-QLITCSTNKMIDYWETCDGSIIR  330 (515)
Q Consensus       305 ~~~-~l~~~~~~~~i~~~d~~~~~~~~  330 (515)
                      +-. .++.|+..+.+++||+.+...++
T Consensus       429 ~~a~~la~GG~k~~~~vwd~~~~~~V~  455 (463)
T KOG0270|consen  429 DVAFTLAFGGEKAVLRVWDIFTNSPVR  455 (463)
T ss_pred             CcceEEEecCccceEEEeecccChhHH
Confidence            654 56677778889999998776543

>KOG4497|consensus

Probab=99.93  E-value=1.3e-23  Score=171.64  Aligned_cols=383  Identities=13%  Similarity=0.171  Sum_probs=259.5

Q ss_pred             EEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec-CCcEEEEeCCCCceeEEEEe
Q psy17610         86 SLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS-KNDIRIWSVRTLNELLRISV  164 (515)
Q Consensus        86 ~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~  164 (515)
                      -..|||+|+++|+++.- .+.|-|.++ .++...+. .-..|..+.|..|.-+++.+.. ++.|.+|++...+-...+..
T Consensus        13 ~c~fSp~g~yiAs~~~y-rlviRd~~t-lq~~qlf~-cldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIde   89 (447)
T KOG4497|consen   13 FCSFSPCGNYIASLSRY-RLVIRDSET-LQLHQLFL-CLDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDE   89 (447)
T ss_pred             ceeECCCCCeeeeeeee-EEEEeccch-hhHHHHHH-HHHHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEecc
Confidence            35799999999998876 788888887 44444333 3457888999998877777766 78999999998888888888


Q ss_pred             cCeEEEEEEEeeCCCEEE-EEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEcc-CCc
Q psy17610        165 MNMICACIVFTYDGKAIL-SGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLT-RES  242 (515)
Q Consensus       165 ~~~~v~~~~~~~~~~~l~-~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~-~~~  242 (515)
                      ...++.+++|+|||+.++ +...+-.|.+|.+.+.+....-  -....+..++|+|+|++.+..+.-.....+++. -..
T Consensus        90 g~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~~--~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~~  167 (447)
T KOG4497|consen   90 GQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLLP--HPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSCKA  167 (447)
T ss_pred             CCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEEec--ccccCceeEEECCCCceeeeeecccHHHHHHHHhhHH
Confidence            889999999999997655 5566889999999987765432  234456899999999998887653221111111 012


Q ss_pred             eeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEe
Q psy17610        243 QSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWE  322 (515)
Q Consensus       243 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d  322 (515)
                      ......+.-.+-..+.+.|+|||+.++         +||-.-.-.+..+.-.-.+..++|+|.++.+++|+.|+.+++.+
T Consensus       168 W~ll~~f~~dT~DltgieWsPdg~~la---------Vwd~~Leykv~aYe~~lG~k~v~wsP~~qflavGsyD~~lrvln  238 (447)
T KOG4497|consen  168 WILLKEFKLDTIDLTGIEWSPDGNWLA---------VWDNVLEYKVYAYERGLGLKFVEWSPCNQFLAVGSYDQMLRVLN  238 (447)
T ss_pred             HHHHHhcCCCcccccCceECCCCcEEE---------EecchhhheeeeeeeccceeEEEeccccceEEeeccchhhhhhc
Confidence            233334444555678899999998765         45433222333444445688899999999999999999999987


Q ss_pred             CCCCceEEEEecCC------------------CccEEEEEEcCCCCEEEEEcCCCeEEEEEcc-------CCeeeeeccC
Q psy17610        323 TCDGSIIRSLEGSD------------------VAAVNCVDFVDDGKYFLTGGADQIVKMWMYR-------EGVPCFVGIG  377 (515)
Q Consensus       323 ~~~~~~~~~~~~~~------------------~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~-------~~~~~~~~~~  377 (515)
                      --+.++..++-...                  .-...|+.|.|..- =+.-.... =.+|+..       ..++..-+..
T Consensus       239 h~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~-~a~~~~~s-e~~YE~~~~pv~~~~lkp~tD~pn  316 (447)
T KOG4497|consen  239 HFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDL-EAHIWEES-ETIYEQQMTPVKVHKLKPPTDFPN  316 (447)
T ss_pred             eeeeeehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCcc-ccCccccc-hhhhhhhhcceeeecccCCCCCCC
Confidence            66655544332110                  01233555555311 01000000 0112111       1122222333


Q ss_pred             CCCCeeEEEECCCCcEEEEEeC--CCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcE
Q psy17610        378 HAASITKIKISPDKKVIVSVSA--DGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQ  455 (515)
Q Consensus       378 ~~~~i~~~~~~~~~~~l~~~~~--dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~  455 (515)
                      ....+.-++|++|..+++|-..  -..+-+||++..+...                     ......+|....|.|....
T Consensus       317 Pk~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~a---------------------vLiQk~piraf~WdP~~pr  375 (447)
T KOG4497|consen  317 PKCGAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHA---------------------VLIQKHPIRAFEWDPGRPR  375 (447)
T ss_pred             cccccceeeecCCceEEeeecCCCCceEEEEechhhhhhh---------------------hhhhccceeEEEeCCCCce
Confidence            4556788999999999998754  3568999998654211                     1112345999999999999


Q ss_pred             EEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCe
Q psy17610        456 LITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQI  507 (515)
Q Consensus       456 l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~  507 (515)
                      |+.+.....+++|.......+.. .... -.|..+.|.-+|..++..+.|..
T Consensus       376 L~vctg~srLY~W~psg~~~V~v-P~~G-F~i~~l~W~~~g~~i~l~~kDaf  425 (447)
T KOG4497|consen  376 LVVCTGKSRLYFWAPSGPRVVGV-PKKG-FNIQKLQWLQPGEFIVLCGKDAF  425 (447)
T ss_pred             EEEEcCCceEEEEcCCCceEEec-CCCC-ceeeeEEecCCCcEEEEEcCCce
Confidence            99998888899999765444333 3333 78999999999999999998863

>KOG0270|consensus

Probab=99.92  E-value=4.3e-23  Score=175.32  Aligned_cols=286  Identities=16%  Similarity=0.195  Sum_probs=203.1

Q ss_pred             EEEeeCCCEEEEEeCCC-----eEEEEecCCCceEEEecCCCCCCeEEEEEcC-------CCCEEEEecCCCcEEEEEcc
Q psy17610        172 IVFTYDGKAILSGWNDG-----FIRCFTPQSGKLKFIIPNAHNRGVTALAITQ-------DGTRLLSGGGEGQVRIWKLT  239 (515)
Q Consensus       172 ~~~~~~~~~l~~~~~dg-----~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-------~~~~l~~~~~d~~i~iw~~~  239 (515)
                      +..-|..+.++++-.+.     .+++|+-........--.--.....|++|..       .|+++|.|+.|..|.|||+.
T Consensus       131 ~~V~psDnlIl~ar~eddvs~LEvYVyn~~e~nlYvHHD~ilpafPLC~ewld~~~~~~~~gNyvAiGtmdp~IeIWDLD  210 (463)
T KOG0270|consen  131 EQVKPSDNLILCARNEDDVSYLEVYVYNEEEENLYVHHDFILPAFPLCIEWLDHGSKSGGAGNYVAIGTMDPEIEIWDLD  210 (463)
T ss_pred             ceeccCCcEEEEeeccCCceEEEEEEEcCCCcceeEecceeccCcchhhhhhhcCCCCCCCcceEEEeccCceeEEeccc
Confidence            44556666666654432     3555554432221100001123345666643       36899999999999999985


Q ss_pred             CCce-------------------eeEEeeccccCceEEEEEecC-CCEEEEEeCCCcEEEEEcccceEEEEEE-cCccEE
Q psy17610        240 RESQ-------------------SLQCVLKEHTSSVSVIQIKSD-SKEAMSASTDGTCVLWDLIKSTRLIIMI-LPSMIM  298 (515)
Q Consensus       240 ~~~~-------------------~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~~  298 (515)
                      -...                   +......+|+..|..++|+.. .+.|++|+.|.+|++||+.++++...+. +..+|.
T Consensus       211 I~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq  290 (463)
T KOG0270|consen  211 IVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQ  290 (463)
T ss_pred             cccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEEEEcCCCCcceehhhcCCcee
Confidence            2211                   011123468888888988765 4568899999999999999999999998 456899


Q ss_pred             EEEEcCC-CcEEEEEECCCeEEEEeCCCCce-EEEEecCCCccEEEEEEcCC-CCEEEEEcCCCeEEEEEccCC-eeeee
Q psy17610        299 SAAYHPS-EVQLITCSTNKMIDYWETCDGSI-IRSLEGSDVAAVNCVDFVDD-GKYFLTGGADQIVKMWMYREG-VPCFV  374 (515)
Q Consensus       299 ~~~~~~~-~~~l~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~-~~~~~  374 (515)
                      ++.|+|. ...|++|+.|+++.+.|.+.... -..++..  +.|-.++|.|. ...++++..||+++-+|++.. +++.+
T Consensus       291 ~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~--g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt  368 (463)
T KOG0270|consen  291 TLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKFD--GEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWT  368 (463)
T ss_pred             EEEecCCCceEEEeccccceEEeeeccCccccCceEEec--cceEEEEecCCCceeEEEecCCceEEeeecCCCCCceeE
Confidence            9999995 57888999999999999985322 2223322  67889999985 456778889999999999875 89999


Q ss_pred             ccCCCCCeeEEEECCC-CcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCC
Q psy17610        375 GIGHAASITKIKISPD-KKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSE  453 (515)
Q Consensus       375 ~~~~~~~i~~~~~~~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~  453 (515)
                      +..|.++|.++++++. ..+|++++.|+.+++|++..........+.+.                  -+...++++.|+-
T Consensus       369 ~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~~~~~~------------------~~rl~c~~~~~~~  430 (463)
T KOG0270|consen  369 LKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSVKEHSFK------------------LGRLHCFALDPDV  430 (463)
T ss_pred             EEeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCccccccccc------------------ccceeecccCCCc
Confidence            9999999999999984 45789999999999999876543222222111                  0225566777776


Q ss_pred             c-EEEEeecCCeEEEEecCCCeeee
Q psy17610        454 V-QLITCSTNKMIDYWETCDGSIIR  477 (515)
Q Consensus       454 ~-~l~~~~~dg~v~iwd~~~~~~~~  477 (515)
                      . ++|.|+..+.+++||+.+...+.
T Consensus       431 a~~la~GG~k~~~~vwd~~~~~~V~  455 (463)
T KOG0270|consen  431 AFTLAFGGEKAVLRVWDIFTNSPVR  455 (463)
T ss_pred             ceEEEecCccceEEEeecccChhHH
Confidence            5 67788888889999998876543

>KOG2919|consensus

Probab=99.92  E-value=1.2e-22  Score=165.69  Aligned_cols=273  Identities=13%  Similarity=0.176  Sum_probs=208.1

Q ss_pred             eEEEEeCCCCcEEEEEecCCcEEEEeCCCC------------ceeEEEE-ecCeEEEEEEEe-------eCCCEEEEEeC
Q psy17610        127 IYDLQFPVNFSSVFATCSKNDIRIWSVRTL------------NELLRIS-VMNMICACIVFT-------YDGKAILSGWN  186 (515)
Q Consensus       127 v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~------------~~~~~~~-~~~~~v~~~~~~-------~~~~~l~~~~~  186 (515)
                      ...+.|+|||..|++.+.|..+.+|++...            +....++ .....|...+|-       |+..++++.+.
T Consensus        52 ~kgckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~ssr  131 (406)
T KOG2919|consen   52 LKGCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVSSR  131 (406)
T ss_pred             hccceeCCCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeeccc
Confidence            345789999999999999999999998631            1111222 233456666664       56778999999


Q ss_pred             CCeEEEEecCCCceEEEec-CCCCC---CeEEEEEcCCCCEEEEecCCCcEEEEEccCCce-eeEEee-----ccccCce
Q psy17610        187 DGFIRCFTPQSGKLKFIIP-NAHNR---GVTALAITQDGTRLLSGGGEGQVRIWKLTRESQ-SLQCVL-----KEHTSSV  256 (515)
Q Consensus       187 dg~i~~~~~~~~~~~~~~~-~~~~~---~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~-~~~~~~-----~~~~~~v  256 (515)
                      +.-|++||.-+|+....+. ..|..   ...+++|+|||..|++|. ...|++||+..... ......     .+..+-+
T Consensus       132 ~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGy-krcirvFdt~RpGr~c~vy~t~~~~k~gq~gii  210 (406)
T KOG2919|consen  132 DQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGY-KRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGII  210 (406)
T ss_pred             cCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeecc-cceEEEeeccCCCCCCcchhhhhccccccccee
Confidence            9999999999999877652 12333   356899999999998664 57999999943322 222222     2346778


Q ss_pred             EEEEEecCCC-EEEEEeCCCcEEEEEcccceEEEEEEc-CccEEEEEEcCCCcEEEEEEC-CCeEEEEeCCCC-ceEEEE
Q psy17610        257 SVIQIKSDSK-EAMSASTDGTCVLWDLIKSTRLIIMIL-PSMIMSAAYHPSEVQLITCST-NKMIDYWETCDG-SIIRSL  332 (515)
Q Consensus       257 ~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~-~~~i~~~d~~~~-~~~~~~  332 (515)
                      .+++|+|-.. .++.++....+-|+.-..+.++..+.. .+.|+.+.|.++|+.|++|.. +..|..||++.- .++..+
T Consensus       211 sc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~L  290 (406)
T KOG2919|consen  211 SCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVYAL  290 (406)
T ss_pred             eeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchhhhh
Confidence            9999999554 788899888888988878877777654 458999999999999999876 778999999864 455555


Q ss_pred             ecCCCccEE--EEEEcCCCCEEEEEcCCCeEEEEEccC-CeeeeeccCCCCCeeEEEECCCCcEEEEEeCC
Q psy17610        333 EGSDVAAVN--CVDFVDDGKYFLTGGADQIVKMWMYRE-GVPCFVGIGHAASITKIKISPDKKVIVSVSAD  400 (515)
Q Consensus       333 ~~~~~~~i~--~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d  400 (515)
                      ..+....-.  -+...|++++|++|+.||.|++||++. +..+..+..|...++.++++|--.++++++..
T Consensus       291 ~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~~~~sd~vNgvslnP~mpilatssGq  361 (406)
T KOG2919|consen  291 ERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGNEVSVTGNYSDTVNGVSLNPIMPILATSSGQ  361 (406)
T ss_pred             hhhccCccceEEEecCCCCceeeccCCCccEEEEecCCCCCcccccccccccccceecCcccceeeeccCc
Confidence            554321222  356678999999999999999999988 77788888999999999999998888888654

>KOG1034|consensus

Probab=99.91  E-value=1.8e-22  Score=165.00  Aligned_cols=291  Identities=16%  Similarity=0.169  Sum_probs=218.1

Q ss_pred             EEEEecCCCcEEEEEEec----CC-CEEEEEecCceEEEEECCCCc--e-eEEeec-cCccCeEEEEeCCC----CcEEE
Q psy17610         74 ALYLLKDDSGISSLQYNP----VN-NKVFVGTVNCEIFLIDMNSGF--T-LTLVNT-CHTSAIYDLQFPVN----FSSVF  140 (515)
Q Consensus        74 ~~~~~~~~~~v~~~~~s~----~~-~~l~~~~~d~~i~iw~~~~~~--~-~~~~~~-~h~~~v~~~~~~~~----~~~l~  140 (515)
                      ......|..+|..++|++    +. +.+|+.+.+ .+.+|+....-  . +..... .|......++|+-+    ..+++
T Consensus        31 ~~l~ed~~~~I~gv~fN~~~~~~e~~vfatvG~~-rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~la  109 (385)
T KOG1034|consen   31 NHLKEDHNKPIFGVAFNSFLGCDEPQVFATVGGN-RVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNTGNPFLA  109 (385)
T ss_pred             eehhccCCCccceeeeehhcCCCCCceEEEeCCc-EEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCCCCeeEE
Confidence            334557889999999985    22 345555544 78999887532  1 122222 36777788888532    46788


Q ss_pred             EEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCC-CEEEEEeCCCeEEEEecCCCceEEEec--CCCCCCeEEEEE
Q psy17610        141 ATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDG-KAILSGWNDGFIRCFTPQSGKLKFIIP--NAHNRGVTALAI  217 (515)
Q Consensus       141 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~~~~~~~~~~~~~~--~~~~~~v~~~~~  217 (515)
                      +++.-|.|+|.|+.+++....+.+|...|..+.+.|+. +++++++.|..|++|++++..++..+-  .+|...|.++.|
T Consensus       110 ~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~  189 (385)
T KOG1034|consen  110 AGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDF  189 (385)
T ss_pred             eecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEEE
Confidence            88889999999999999999999999999999999976 688899999999999999999987762  579999999999


Q ss_pred             cCCCCEEEEecCCCcEEEEEccCCcee----eE----------------E------eeccccCceEEEEEecCCCEEEEE
Q psy17610        218 TQDGTRLLSGGGEGQVRIWKLTRESQS----LQ----------------C------VLKEHTSSVSVIQIKSDSKEAMSA  271 (515)
Q Consensus       218 ~~~~~~l~~~~~d~~i~iw~~~~~~~~----~~----------------~------~~~~~~~~v~~~~~~~~~~~l~~~  271 (515)
                      +++|.++++++.|.++++|++......    ..                .      +..-|...|.|+.|-  |+++++-
T Consensus       190 ~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~--gd~ilSk  267 (385)
T KOG1034|consen  190 SLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWF--GDFILSK  267 (385)
T ss_pred             cCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccchHHHHHHH--hhheeec
Confidence            999999999999999999999621100    00                0      122356666666664  4788998


Q ss_pred             eCCCcEEEEEcc-cceE-------------EEEEEcCc-c--EEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEE--EE
Q psy17610        272 STDGTCVLWDLI-KSTR-------------LIIMILPS-M--IMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIR--SL  332 (515)
Q Consensus       272 ~~d~~i~iwd~~-~~~~-------------~~~~~~~~-~--~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~--~~  332 (515)
                      +-++.|..|..- -.+.             ...+..+. .  ....++.|-.+.|+.|...|.+++||++..++..  ++
T Consensus       268 scenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g~v~vwdL~~~ep~~~ttl  347 (385)
T KOG1034|consen  268 SCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSGKVYVWDLDNNEPPKCTTL  347 (385)
T ss_pred             ccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhhccCCCcEEEEECCCCCCccCceE
Confidence            999999999872 1111             11222222 2  3445667889999999999999999998876631  11


Q ss_pred             -ecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEcc
Q psy17610        333 -EGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYR  367 (515)
Q Consensus       333 -~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~  367 (515)
                       .......|+..+|+.||.+|+..++|++|.-||..
T Consensus       348 ~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwdrv  383 (385)
T KOG1034|consen  348 THSKSGSTVRQTSFSRDGSILVLVCDDGTVWRWDRV  383 (385)
T ss_pred             EeccccceeeeeeecccCcEEEEEeCCCcEEEEEee
Confidence             12223678999999999999999999999999853

>KOG1009|consensus

Probab=99.91  E-value=3.6e-22  Score=167.90  Aligned_cols=309  Identities=17%  Similarity=0.134  Sum_probs=211.1

Q ss_pred             CCCcEEEEEEecCCC-EEEEEecCceEEEEECCCCc--------eeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEE
Q psy17610         80 DDSGISSLQYNPVNN-KVFVGTVNCEIFLIDMNSGF--------TLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRI  150 (515)
Q Consensus        80 ~~~~v~~~~~s~~~~-~l~~~~~d~~i~iw~~~~~~--------~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~i  150 (515)
                      ...+|..+.|.++.. .||+|+.|..|++|.++.+.        .....+..|..+|+++.|+|+|..|++++.+|.|.+
T Consensus        12 ~~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~l   91 (434)
T KOG1009|consen   12 DHEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFL   91 (434)
T ss_pred             CCCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEE
Confidence            356899999999766 99999999999999886421        123356789999999999999999999999999999


Q ss_pred             EeCC--------C--------CceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEE
Q psy17610        151 WSVR--------T--------LNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTA  214 (515)
Q Consensus       151 w~~~--------~--------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~  214 (515)
                      |...        +        ....+.+.+|...+..++|+|++.++++++.|..+++||+..|+....+ ..|...+..
T Consensus        92 Wk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~-~dh~~yvqg  170 (434)
T KOG1009|consen   92 WKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAIL-DDHEHYVQG  170 (434)
T ss_pred             EEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEeec-cccccccce
Confidence            9866        2        1234456688899999999999999999999999999999999999887 799999999


Q ss_pred             EEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccC-ceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEc
Q psy17610        215 LAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTS-SVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMIL  293 (515)
Q Consensus       215 ~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~  293 (515)
                      ++|.|-++++++-+.|...+.+.+....  ..   ..+.. ....-++.+..        ....+++.-++.        
T Consensus       171 vawDpl~qyv~s~s~dr~~~~~~~~~~~--~~---~~~~~~~m~~~~~~~~e--------~~s~rLfhDeTl--------  229 (434)
T KOG1009|consen  171 VAWDPLNQYVASKSSDRHPEGFSAKLKQ--VI---KRHGLDIMPAKAFNERE--------GKSTRLFHDETL--------  229 (434)
T ss_pred             eecchhhhhhhhhccCcccceeeeeeee--ee---eeeeeeEeeecccCCCC--------cceeeeeecCch--------
Confidence            9999999999999999877777763211  11   11110 00011111110        111222211111        


Q ss_pred             CccEEEEEEcCCCcEEEEEEC----CC-----eEEEEeCCC-CceEEEEecCCCccEEEEEEc-----------------
Q psy17610        294 PSMIMSAAYHPSEVQLITCST----NK-----MIDYWETCD-GSIIRSLEGSDVAAVNCVDFV-----------------  346 (515)
Q Consensus       294 ~~~~~~~~~~~~~~~l~~~~~----~~-----~i~~~d~~~-~~~~~~~~~~~~~~i~~~~~~-----------------  346 (515)
                      +.-...++|+|+|..+++...    .+     ..++|+-.. .++...+.... .+...+.++                 
T Consensus       230 ksFFrRlsfTPdG~llvtPag~~~~g~~~~~n~tYvfsrk~l~rP~~~lp~~~-k~~lavr~~pVy~elrp~~~~~~~~~  308 (434)
T KOG1009|consen  230 KSFFRRLSFTPDGSLLVTPAGLFKVGGGVFRNTSYVFSRKDLKRPAARLPSPK-KPALAVRFSPVYYELRPLSSEKFLFV  308 (434)
T ss_pred             hhhhhhcccCCCCcEEEcccceeeeCCceeeceeEeeccccccCceeecCCCC-cceEEEEeeeeEEEeccccccccccc
Confidence            112344566666666655321    11     223333221 12222232222 222222322                 


Q ss_pred             -CCCCEEEEEcCCCeEEEEEccCCeeeeec-cCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCc
Q psy17610        347 -DDGKYFLTGGADQIVKMWMYREGVPCFVG-IGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELE  412 (515)
Q Consensus       347 -~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  412 (515)
                       |.+-.+|+++. +.|++||.++.+++... .-|-..|+.++|++||..|+..+.||...+-.++..+
T Consensus       309 lpyrlvfaiAt~-~svyvydtq~~~P~~~v~nihy~~iTDiaws~dg~~l~vSS~DGyCS~vtfe~~e  375 (434)
T KOG1009|consen  309 LPYRLVFAIATK-NSVYVYDTQTLEPLAVVDNIHYSAITDIAWSDDGSVLLVSSTDGFCSLVTFEPWE  375 (434)
T ss_pred             cccceEEEEeec-ceEEEeccccccceEEEeeeeeeeecceeecCCCcEEEEeccCCceEEEEEcchh
Confidence             33344566665 48999999988777654 3577899999999999999999999988877776654

>KOG0302|consensus

Probab=99.91  E-value=1.1e-22  Score=169.12  Aligned_cols=248  Identities=17%  Similarity=0.288  Sum_probs=188.3

Q ss_pred             eccCccCeEEEEeCCCCcEEEEE--ecCCcEEEEeCCC----------------CceeEEEEecCeEEEEEEEeeCC-CE
Q psy17610        120 NTCHTSAIYDLQFPVNFSSVFAT--CSKNDIRIWSVRT----------------LNELLRISVMNMICACIVFTYDG-KA  180 (515)
Q Consensus       120 ~~~h~~~v~~~~~~~~~~~l~~~--~~d~~i~iw~~~~----------------~~~~~~~~~~~~~v~~~~~~~~~-~~  180 (515)
                      ..+|.+.++.+.-++-++..+++  +..|.|.||++..                .+++.++.+|...=+.++|||-. ..
T Consensus       147 ~i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~  226 (440)
T KOG0302|consen  147 SIPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGR  226 (440)
T ss_pred             ccccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecccccccc
Confidence            34588888888887765444444  4489999999853                35677888898888999999933 24


Q ss_pred             EEEEeCCCeEEEEecCCCceEE--EecCCCCCCeEEEEEcC-CCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceE
Q psy17610        181 ILSGWNDGFIRCFTPQSGKLKF--IIPNAHNRGVTALAITQ-DGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVS  257 (515)
Q Consensus       181 l~~~~~dg~i~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~  257 (515)
                      |++|.-.+.|++|...++....  .-..+|...|..++|+| ....|++|+.||.|+|||++....+.....+.|.+.|+
T Consensus       227 LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~sDVN  306 (440)
T KOG0302|consen  227 LLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHNSDVN  306 (440)
T ss_pred             cccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEeeccCCcee
Confidence            7888888899999998876532  11257999999999999 45689999999999999998776655556689999999


Q ss_pred             EEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCC
Q psy17610        258 VIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDV  337 (515)
Q Consensus       258 ~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~  337 (515)
                      .+.|+....+|++|+.||+++|||+++.+                                      .++++..++.|. 
T Consensus       307 VISWnr~~~lLasG~DdGt~~iwDLR~~~--------------------------------------~~~pVA~fk~Hk-  347 (440)
T KOG0302|consen  307 VISWNRREPLLASGGDDGTLSIWDLRQFK--------------------------------------SGQPVATFKYHK-  347 (440)
T ss_pred             eEEccCCcceeeecCCCceEEEEEhhhcc--------------------------------------CCCcceeEEecc-
Confidence            99999988899999999999999987532                                      345667777666 


Q ss_pred             ccEEEEEEcC-CCCEEEEEcCCCeEEEEEccCCee----------------eeeccCC--CCCeeEEEECCC-CcEEEEE
Q psy17610        338 AAVNCVDFVD-DGKYFLTGGADQIVKMWMYREGVP----------------CFVGIGH--AASITKIKISPD-KKVIVSV  397 (515)
Q Consensus       338 ~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~----------------~~~~~~~--~~~i~~~~~~~~-~~~l~~~  397 (515)
                      .+|+++.|+| +...|++++.|.+|.+||+....-                .+.+--|  +..+..+.|+++ ..+|++.
T Consensus       348 ~pItsieW~p~e~s~iaasg~D~QitiWDlsvE~D~ee~~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsT  427 (440)
T KOG0302|consen  348 APITSIEWHPHEDSVIAASGEDNQITIWDLSVEADEEEIDQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVST  427 (440)
T ss_pred             CCeeEEEeccccCceEEeccCCCcEEEEEeeccCChhhhccccccchhcCCceeEEEecchhHhhhheeccCCCCeEEEe
Confidence            8999999998 456788888999999999853110                0111123  346778899984 3477777


Q ss_pred             eCCCcEEEEe
Q psy17610        398 SADGGIFLWT  407 (515)
Q Consensus       398 ~~dg~i~iw~  407 (515)
                      +.|| +.||.
T Consensus       428 a~dG-fnVfk  436 (440)
T KOG0302|consen  428 AIDG-FNVFK  436 (440)
T ss_pred             cccc-eeEEE
Confidence            7787 45553

>KOG0302|consensus

Probab=99.91  E-value=1.3e-22  Score=168.76  Aligned_cols=261  Identities=16%  Similarity=0.282  Sum_probs=187.8

Q ss_pred             CCCCCCeEEEEEcCCC--CEEEEecCCCcEEEEEccC--------------CceeeEEeeccccCceEEEEEecCC-CEE
Q psy17610        206 NAHNRGVTALAITQDG--TRLLSGGGEGQVRIWKLTR--------------ESQSLQCVLKEHTSSVSVIQIKSDS-KEA  268 (515)
Q Consensus       206 ~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~iw~~~~--------------~~~~~~~~~~~~~~~v~~~~~~~~~-~~l  268 (515)
                      .+|.+.++.+.-.+-+  .+.++-+..|.|.||++..              ....++.++.+|...-..++|+|-. ..+
T Consensus       148 i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~L  227 (440)
T KOG0302|consen  148 IPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGRL  227 (440)
T ss_pred             cccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeeccccccccc
Confidence            4677888888777744  4555667889999999852              2245677888999999999999932 347


Q ss_pred             EEEeCCCcEEEEEcccceEEE----EEEcCccEEEEEEcCCC-cEEEEEECCCeEEEEeCCCCce-EEEEecCCCccEEE
Q psy17610        269 MSASTDGTCVLWDLIKSTRLI----IMILPSMIMSAAYHPSE-VQLITCSTNKMIDYWETCDGSI-IRSLEGSDVAAVNC  342 (515)
Q Consensus       269 ~~~~~d~~i~iwd~~~~~~~~----~~~~~~~~~~~~~~~~~-~~l~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~i~~  342 (515)
                      ++|..-+.|++|...++.-..    ...+...|..++|+|.. ..|++++.||+|+|||++.+.. ...+...+.+.|+.
T Consensus       228 lsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~sDVNV  307 (440)
T KOG0302|consen  228 LSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHNSDVNV  307 (440)
T ss_pred             ccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEeeccCCceee
Confidence            788778899999988764221    22355679999999965 5778899999999999999832 22222344489999


Q ss_pred             EEEcCCCCEEEEEcCCCeEEEEEccC---CeeeeeccCCCCCeeEEEECC-CCcEEEEEeCCCcEEEEeCCCCcCccCCC
Q psy17610        343 VDFVDDGKYFLTGGADQIVKMWMYRE---GVPCFVGIGHAASITKIKISP-DKKVIVSVSADGGIFLWTFPELEDDVGDS  418 (515)
Q Consensus       343 ~~~~~~~~~l~~~~~dg~i~i~d~~~---~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~  418 (515)
                      +.|+.+..+||+|+.||+++|||++.   ++++..+.-|..+|+++.|+| +...|++++.|..|.+||+..........
T Consensus       308 ISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsvE~D~ee~~  387 (440)
T KOG0302|consen  308 ISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLSVEADEEEID  387 (440)
T ss_pred             EEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEeeccCChhhhc
Confidence            99999888999999999999999975   578899999999999999999 45678888899999999997654321111


Q ss_pred             cccceeeecccccccceeeecCcccEEEeeeccCCc-EEEEeecCCeEEEEe
Q psy17610        419 RSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEV-QLITCSTNKMIDYWE  469 (515)
Q Consensus       419 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~v~iwd  469 (515)
                      ..-....  ...++..+....-...+..+.|++.-. ++++.+.|| +.||.
T Consensus       388 ~~a~~~L--~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa~dG-fnVfk  436 (440)
T KOG0302|consen  388 QEAAEGL--QDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAIDG-FNVFK  436 (440)
T ss_pred             cccccch--hcCCceeEEEecchhHhhhheeccCCCCeEEEecccc-eeEEE
Confidence            1110000  011111222222345688899998754 677777777 55554

>KOG1188|consensus

Probab=99.90  E-value=1.7e-22  Score=166.08  Aligned_cols=271  Identities=18%  Similarity=0.225  Sum_probs=205.9

Q ss_pred             cEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEee--CCCEEEEEeCCCeEEEEecCCCceEEEec-CCCC-CCe
Q psy17610        137 SSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTY--DGKAILSGWNDGFIRCFTPQSGKLKFIIP-NAHN-RGV  212 (515)
Q Consensus       137 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~~~~~~~~~~~~~~~-~~~~-~~v  212 (515)
                      ..++++.+.|.|++||..+++.+..++++...+..+.|..  ....+.+++.||+|++||++.......+. ..++ .+.
T Consensus        41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f  120 (376)
T KOG1188|consen   41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPF  120 (376)
T ss_pred             eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcc
Confidence            5788888999999999999999999999999999999977  45678899999999999999876554442 2333 467


Q ss_pred             EEEEEcCCCCEEEEec----CCCcEEEEEccCCceeeEEeeccccCceEEEEEecC-CCEEEEEeCCCcEEEEEcccce-
Q psy17610        213 TALAITQDGTRLLSGG----GEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSD-SKEAMSASTDGTCVLWDLIKST-  286 (515)
Q Consensus       213 ~~~~~~~~~~~l~~~~----~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~-  286 (515)
                      .+++.+-.++.+++|.    .+-.|.+||++..++........|...|+++.|+|+ .+.|++|+.||.|.++|+.... 
T Consensus       121 ~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~E  200 (376)
T KOG1188|consen  121 ICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNE  200 (376)
T ss_pred             eEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCCcc
Confidence            7777776778888875    367899999987666566667889999999999995 5789999999999999997653 


Q ss_pred             ---EEEEEEcCccEEEEEEcCCC-cEEEEEECCCeEEEEeCCCCceEEEEecCCC------------ccEEEEEEcC-CC
Q psy17610        287 ---RLIIMILPSMIMSAAYHPSE-VQLITCSTNKMIDYWETCDGSIIRSLEGSDV------------AAVNCVDFVD-DG  349 (515)
Q Consensus       287 ---~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~------------~~i~~~~~~~-~~  349 (515)
                         ....+...+.|..+.|..++ +.+.+-+......+|+++.+.+...+..+..            .-|.+  .+| ++
T Consensus       201 eDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~~~dY~I~~--~~~~~~  278 (376)
T KOG1188|consen  201 EDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSEETWLENPDVSADDLRKEDNCDYVINE--HSPGDK  278 (376)
T ss_pred             hhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCChhhcccCccchhhhHHhhhhhhheeec--ccCCCc
Confidence               23444566679999998877 5688888899999999999886655554310            11221  223 34


Q ss_pred             CEEEEEcC-CCeEEEEEcc---C---CeeeeeccC-CCCCeeEEEECCCCcEEEEEeCCCcEEEEeCC
Q psy17610        350 KYFLTGGA-DQIVKMWMYR---E---GVPCFVGIG-HAASITKIKISPDKKVIVSVSADGGIFLWTFP  409 (515)
Q Consensus       350 ~~l~~~~~-dg~i~i~d~~---~---~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~  409 (515)
                      ...+.++. -|...++-+.   +   .+....+.+ |..-|+++.|...+.++.+|+.||.+.+|..+
T Consensus       279 ~~~~l~g~~~n~~~~~~~~~~~s~~~~~~~a~l~g~~~eiVR~i~~~~~~~~l~TGGEDG~l~~Wk~~  346 (376)
T KOG1188|consen  279 DTCALAGTDSNKGTIFPLVDTSSGSLLTEPAILQGGHEEIVRDILFDVKNDVLYTGGEDGLLQAWKVE  346 (376)
T ss_pred             ceEEEeccccCceeEEEeeecccccccCccccccCCcHHHHHHHhhhcccceeeccCCCceEEEEecC
Confidence            44444443 5555555433   2   234455555 77788999999899999999999999999864

>KOG1188|consensus

Probab=99.90  E-value=2.8e-22  Score=164.76  Aligned_cols=272  Identities=20%  Similarity=0.256  Sum_probs=200.2

Q ss_pred             CEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCC--CCcEEEEEecCCcEEEEeCCCCceeEEEE--ecC-eE
Q psy17610         94 NKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPV--NFSSVFATCSKNDIRIWSVRTLNELLRIS--VMN-MI  168 (515)
Q Consensus        94 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~~~~~d~~i~iw~~~~~~~~~~~~--~~~-~~  168 (515)
                      ..+|++..+|.|++||..++. ....++++...++.++|..  ....+.+++.||+|++||++...+..++.  .+. .+
T Consensus        41 ~~vav~lSngsv~lyd~~tg~-~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~  119 (376)
T KOG1188|consen   41 TAVAVSLSNGSVRLYDKGTGQ-LLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTP  119 (376)
T ss_pred             eeEEEEecCCeEEEEeccchh-hhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCc
Confidence            678999999999999999964 4456677999999999966  34578888889999999999877655544  333 35


Q ss_pred             EEEEEEeeCCCEEEEEeC----CCeEEEEecCCCce-EEEecCCCCCCeEEEEEcC-CCCEEEEecCCCcEEEEEccCCc
Q psy17610        169 CACIVFTYDGKAILSGWN----DGFIRCFTPQSGKL-KFIIPNAHNRGVTALAITQ-DGTRLLSGGGEGQVRIWKLTRES  242 (515)
Q Consensus       169 v~~~~~~~~~~~l~~~~~----dg~i~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~  242 (515)
                      ..+++..-.++.+++|..    +-.+.+||++..+. +..+...|...|+++.|+| +.+.|++|+.||.|.+||+....
T Consensus       120 f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~  199 (376)
T KOG1188|consen  120 FICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDN  199 (376)
T ss_pred             ceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCCc
Confidence            566666657777887754    56799999998776 7777789999999999999 67899999999999999996442


Q ss_pred             -eeeEEeeccccCceEEEEEecCC-CEEEEEeCCCcEEEEEcccceEEEEEEcCc-------------cEEEEEEcCCCc
Q psy17610        243 -QSLQCVLKEHTSSVSVIQIKSDS-KEAMSASTDGTCVLWDLIKSTRLIIMILPS-------------MIMSAAYHPSEV  307 (515)
Q Consensus       243 -~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-------------~~~~~~~~~~~~  307 (515)
                       ...+...-.|...|..+.|..++ +.+.+-+..++..+|+++.+.+...+..+.             .+...-...+..
T Consensus       200 EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~~~dY~I~~~~~~~~~  279 (376)
T KOG1188|consen  200 EEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSEETWLENPDVSADDLRKEDNCDYVINEHSPGDKD  279 (376)
T ss_pred             chhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCChhhcccCccchhhhHHhhhhhhheeecccCCCcc
Confidence             22233334577789999998876 458888889999999999887655444331             011111122344


Q ss_pred             EEEEEEC-CCeEEEEeC---CC---CceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEc
Q psy17610        308 QLITCST-NKMIDYWET---CD---GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMY  366 (515)
Q Consensus       308 ~l~~~~~-~~~i~~~d~---~~---~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~  366 (515)
                      ..+.++. -+...++-+   .+   .+.+..+.+++..-++++.|...+.++.+|++||.+.+|..
T Consensus       280 ~~~l~g~~~n~~~~~~~~~~~s~~~~~~~a~l~g~~~eiVR~i~~~~~~~~l~TGGEDG~l~~Wk~  345 (376)
T KOG1188|consen  280 TCALAGTDSNKGTIFPLVDTSSGSLLTEPAILQGGHEEIVRDILFDVKNDVLYTGGEDGLLQAWKV  345 (376)
T ss_pred             eEEEeccccCceeEEEeeecccccccCccccccCCcHHHHHHHhhhcccceeeccCCCceEEEEec
Confidence            4444433 444444332   23   34455666666677888999988999999999999999985

>KOG0322|consensus

Probab=99.90  E-value=4.5e-22  Score=157.68  Aligned_cols=303  Identities=14%  Similarity=0.164  Sum_probs=204.9

Q ss_pred             eeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEE
Q psy17610        158 ELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWK  237 (515)
Q Consensus       158 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~  237 (515)
                      +...+++|...++++.|-.+++ |.+|...|.+++|++.+.+....+...+...|+.+.-.|+ ..+.+-+.|+.+.+|+
T Consensus         6 P~fvLRp~~~~v~s~~fqa~~r-L~sg~~~G~V~~w~lqt~r~~~~~r~~g~~~it~lq~~p~-d~l~tqgRd~~L~lw~   83 (323)
T KOG0322|consen    6 PFFVLRPHSSSVTSVLFQANER-LMSGLSVGIVKMWVLQTERDLPLIRLFGRLFITNLQSIPN-DSLDTQGRDPLLILWT   83 (323)
T ss_pred             CeeEeccccchheehhhccchh-hhcccccceEEEEEeecCccchhhhhhccceeeceeecCC-cchhhcCCCceEEEEE
Confidence            4556678889999999987775 9999999999999999998887775478889999999887 4688899999999999


Q ss_pred             ccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCC-cEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCC
Q psy17610        238 LTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDG-TCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNK  316 (515)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  316 (515)
                      +......     ..|+-.+.++.|.+..  +...+... ..-.++-+........                   -++..-
T Consensus        84 ia~s~~i-----~i~Si~~nslgFCrfS--l~~~~k~~eqll~yp~rgsde~h~~-------------------D~g~~t  137 (323)
T KOG0322|consen   84 IAYSAFI-----SIHSIVVNSLGFCRFS--LVKKPKNSEQLLEYPSRGSDETHKQ-------------------DGGDTT  137 (323)
T ss_pred             ccCcceE-----EEeeeeccccccccce--eccCCCcchhheecCCcccchhhhh-------------------ccCccc
Confidence            9542222     2233344444443321  11111110 0111111000000000                   000111


Q ss_pred             eEEEEeCCCCceEEEEecCCCccEEEEEEcC-CC--CEEEEEcCCCeEEEEEccCCe----------eeeeccCCCCCee
Q psy17610        317 MIDYWETCDGSIIRSLEGSDVAAVNCVDFVD-DG--KYFLTGGADQIVKMWMYREGV----------PCFVGIGHAASIT  383 (515)
Q Consensus       317 ~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~-~~--~~l~~~~~dg~i~i~d~~~~~----------~~~~~~~~~~~i~  383 (515)
                      .+++-|-..        ....+.+.|..+.. ++  -++++|.++|.+.+||+.++.          .......|..+|.
T Consensus       138 qv~i~dd~~--------~~Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvl  209 (323)
T KOG0322|consen  138 QVQIADDSE--------RSKLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVL  209 (323)
T ss_pred             eeEccCchh--------ccccCceeeeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcce
Confidence            111111100        01114444544322 22  256788889999999998873          3334457899999


Q ss_pred             EEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCC
Q psy17610        384 KIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNK  463 (515)
Q Consensus       384 ~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg  463 (515)
                      ++.+.+.-..=++++.+..+..|++............                .......+..+..-||++.+|+++.|+
T Consensus       210 sldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~~e----------------~~lknpGv~gvrIRpD~KIlATAGWD~  273 (323)
T KOG0322|consen  210 SLDYASSCDRGISGGADDKLVMYSLNHSTGSLQIRKE----------------ITLKNPGVSGVRIRPDGKILATAGWDH  273 (323)
T ss_pred             eeeechhhcCCcCCCccccceeeeeccccCcccccce----------------EEecCCCccceEEccCCcEEeecccCC
Confidence            9999986666778888889999998754322111111                111223477889999999999999999


Q ss_pred             eEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEEEEEE
Q psy17610        464 MIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLY  513 (515)
Q Consensus       464 ~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~  513 (515)
                      .||+|+.++..++..+.-|. +.|++++|+|+...+|+++.|++|.+|++
T Consensus       274 RiRVyswrtl~pLAVLkyHs-agvn~vAfspd~~lmAaaskD~rISLWkL  322 (323)
T KOG0322|consen  274 RIRVYSWRTLNPLAVLKYHS-AGVNAVAFSPDCELMAAASKDARISLWKL  322 (323)
T ss_pred             cEEEEEeccCCchhhhhhhh-cceeEEEeCCCCchhhhccCCceEEeeec
Confidence            99999999999999999998 99999999999999999999999999986

>KOG0307|consensus

Probab=99.89  E-value=8.8e-23  Score=193.53  Aligned_cols=283  Identities=19%  Similarity=0.303  Sum_probs=213.6

Q ss_pred             EEEEeCCCCc-EEEEEe----------cCCcEEEEeCCCCce------eEEEEecCeEEEEEEEeeCCCE----EEEEeC
Q psy17610        128 YDLQFPVNFS-SVFATC----------SKNDIRIWSVRTLNE------LLRISVMNMICACIVFTYDGKA----ILSGWN  186 (515)
Q Consensus       128 ~~~~~~~~~~-~l~~~~----------~d~~i~iw~~~~~~~------~~~~~~~~~~v~~~~~~~~~~~----l~~~~~  186 (515)
                      ..++|+|++. +++++.          .+.++.||.+.....      +..+. ...+...++|.+.+..    |+.|.+
T Consensus        10 a~~awSp~~~~~laagt~aq~~D~sfst~~slEifeld~~~~~~dlk~~~s~~-s~~rF~kL~W~~~g~~~~GlIaGG~e   88 (1049)
T KOG0307|consen   10 ATFAWSPASPPLLAAGTAAQQFDASFSTSASLEIFELDFSDESSDLKPVGSLQ-SSNRFNKLAWGSYGSHSHGLIAGGLE   88 (1049)
T ss_pred             ceEEecCCCchhhHHHhhhhccccccccccccceeeecccCcccccccccccc-ccccceeeeecccCCCccceeecccc
Confidence            3578888886 333332          244566665542222      22222 3345688999998775    888999


Q ss_pred             CCeEEEEecCCC---c---eEEEecCCCCCCeEEEEEcCC-CCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEE
Q psy17610        187 DGFIRCFTPQSG---K---LKFIIPNAHNRGVTALAITQD-GTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVI  259 (515)
Q Consensus       187 dg~i~~~~~~~~---~---~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~  259 (515)
                      ||.|.+||...-   .   .+... ..|.+.|..+.|++. ++.|++|+.||.|.|||+..........-....+.|.++
T Consensus        89 dG~I~ly~p~~~~~~~~~~~la~~-~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~l  167 (1049)
T KOG0307|consen   89 DGNIVLYDPASIIANASEEVLATK-SKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCL  167 (1049)
T ss_pred             CCceEEecchhhccCcchHHHhhh-cccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEe
Confidence            999999998652   1   23333 679999999999995 559999999999999999753332222223356789999


Q ss_pred             EEecCC-CEEEEEeCCCcEEEEEcccceEEEEEEcCcc---EEEEEEcCCC-cEEEEEECCC---eEEEEeCCCCc-eEE
Q psy17610        260 QIKSDS-KEAMSASTDGTCVLWDLIKSTRLIIMILPSM---IMSAAYHPSE-VQLITCSTNK---MIDYWETCDGS-IIR  330 (515)
Q Consensus       260 ~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~---~~~~~~~~~~-~~l~~~~~~~---~i~~~d~~~~~-~~~  330 (515)
                      +|+..- ..|++++.+|.+.+||++..+.+..+.....   +..++|+|+. ..+++++.|.   .|.+||++... +++
T Consensus       168 sWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k  247 (1049)
T KOG0307|consen  168 SWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLK  247 (1049)
T ss_pred             ccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchh
Confidence            998754 4567888889999999999887777665543   8899999986 4555555543   69999988754 555


Q ss_pred             EEecCCCccEEEEEEcCCC-CEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCc-EEEEEeCCCcEEEEeC
Q psy17610        331 SLEGSDVAAVNCVDFVDDG-KYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKK-VIVSVSADGGIFLWTF  408 (515)
Q Consensus       331 ~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~iw~~  408 (515)
                      .+..|. ..|.++.|++.+ .+|++++.|+.|.+|+.++++.+..+......+..+.|.|... .++.++-||.|.||.+
T Consensus       248 ~~~~H~-~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~~~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl  326 (1049)
T KOG0307|consen  248 ILEGHQ-RGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPAQGNWCFDVQWCPRNPSVMAAASFDGKISIYSL  326 (1049)
T ss_pred             hhcccc-cceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCCCCcceeeeeecCCCcchhhhheeccceeeeee
Confidence            665555 889999999955 8999999999999999999999999988889999999999554 8888899999999999


Q ss_pred             CCCcC
Q psy17610        409 PELED  413 (515)
Q Consensus       409 ~~~~~  413 (515)
                      .....
T Consensus       327 ~~~~~  331 (1049)
T KOG0307|consen  327 QGTDT  331 (1049)
T ss_pred             ecCCc
Confidence            87653

>KOG0303|consensus

Probab=99.89  E-value=1.6e-21  Score=163.42  Aligned_cols=228  Identities=13%  Similarity=0.203  Sum_probs=177.2

Q ss_pred             EEecCCCcEEEEEEec-CCCEEEEEecCceEEEEECCCC------ceeEEeeccCccCeEEEEeCCCC-cEEEEEecCCc
Q psy17610         76 YLLKDDSGISSLQYNP-VNNKVFVGTVNCEIFLIDMNSG------FTLTLVNTCHTSAIYDLQFPVNF-SSVFATCSKND  147 (515)
Q Consensus        76 ~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~iw~~~~~------~~~~~~~~~h~~~v~~~~~~~~~-~~l~~~~~d~~  147 (515)
                      ...+|.++|..++|+| +...+|+|+.|.+|.||++..+      ......+.+|...|--++|+|.. +.|++++.|++
T Consensus        76 ~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~  155 (472)
T KOG0303|consen   76 LVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNT  155 (472)
T ss_pred             CccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCce
Confidence            4568999999999999 7788999999999999998753      23455678999999999999964 56778888999


Q ss_pred             EEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCC-CeEEEEEcCCCCEEEE
Q psy17610        148 IRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNR-GVTALAITQDGTRLLS  226 (515)
Q Consensus       148 i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~  226 (515)
                      |.+||+.+|+.+.++. |.+.|.++.|+.||.+|++.+.|..|++||.++++.+..- .+|.+ .-..+.|-.+|..+-+
T Consensus       156 v~iWnv~tgeali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~-~~heG~k~~Raifl~~g~i~tT  233 (472)
T KOG0303|consen  156 VSIWNVGTGEALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEG-VAHEGAKPARAIFLASGKIFTT  233 (472)
T ss_pred             EEEEeccCCceeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeec-ccccCCCcceeEEeccCceeee
Confidence            9999999999999988 9999999999999999999999999999999999998887 56654 3556677788885544


Q ss_pred             ec---CCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEe-CCCcEEEEEcccceEE----EEEEcCccEE
Q psy17610        227 GG---GEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAS-TDGTCVLWDLIKSTRL----IIMILPSMIM  298 (515)
Q Consensus       227 ~~---~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~----~~~~~~~~~~  298 (515)
                      |-   .+.++-+||...-.......--..++.|.---|.+|.+.++.++ .|+.|+.|.+....+.    ..+....+-.
T Consensus       234 Gfsr~seRq~aLwdp~nl~eP~~~~elDtSnGvl~PFyD~dt~ivYl~GKGD~~IRYyEit~d~P~~hyln~f~S~epQR  313 (472)
T KOG0303|consen  234 GFSRMSERQIALWDPNNLEEPIALQELDTSNGVLLPFYDPDTSIVYLCGKGDSSIRYFEITNEPPFVHYLNTFSSKEPQR  313 (472)
T ss_pred             ccccccccceeccCcccccCcceeEEeccCCceEEeeecCCCCEEEEEecCCcceEEEEecCCCceeEEecccccCCccc
Confidence            42   46899999986443333222223345566666788888776554 5899999998776532    2333344556


Q ss_pred             EEEEcCC
Q psy17610        299 SAAYHPS  305 (515)
Q Consensus       299 ~~~~~~~  305 (515)
                      .+.+.|.
T Consensus       314 G~g~mPK  320 (472)
T KOG0303|consen  314 GMGFMPK  320 (472)
T ss_pred             ccccccc
Confidence            6666664

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.89  E-value=1.3e-19  Score=164.42  Aligned_cols=270  Identities=15%  Similarity=0.138  Sum_probs=181.0

Q ss_pred             EEEeCCCeEEEEecCC-Cc--eEEEecCCCCCCeEEEEEcCCCCEEEEec-CCCcEEEEEccCC-ceeeEEeeccccCce
Q psy17610        182 LSGWNDGFIRCFTPQS-GK--LKFIIPNAHNRGVTALAITQDGTRLLSGG-GEGQVRIWKLTRE-SQSLQCVLKEHTSSV  256 (515)
Q Consensus       182 ~~~~~dg~i~~~~~~~-~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iw~~~~~-~~~~~~~~~~~~~~v  256 (515)
                      ++...++.|.+|++.+ ++  .+..+  .+......++++|++++|++++ .++.|.+|+++.. ......... .....
T Consensus         6 ~~~~~~~~I~~~~~~~~g~l~~~~~~--~~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~-~~~~p   82 (330)
T PRK11028          6 IASPESQQIHVWNLNHEGALTLLQVV--DVPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESP-LPGSP   82 (330)
T ss_pred             EEcCCCCCEEEEEECCCCceeeeeEE--ecCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeec-CCCCc
Confidence            3446789999999964 43  33443  2345677899999999887664 5789999999621 222222222 23346


Q ss_pred             EEEEEecCCCEEEEEeC-CCcEEEEEcccc----eEEEEEEcCccEEEEEEcCCCcEEEEEEC-CCeEEEEeCCCCceEE
Q psy17610        257 SVIQIKSDSKEAMSAST-DGTCVLWDLIKS----TRLIIMILPSMIMSAAYHPSEVQLITCST-NKMIDYWETCDGSIIR  330 (515)
Q Consensus       257 ~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~i~~~d~~~~~~~~  330 (515)
                      ..++++|+++++++++. ++.|.+|++.+.    +.............++++|++++++++.. ++.|.+||+.+...+.
T Consensus        83 ~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~  162 (330)
T PRK11028         83 THISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIEGLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLV  162 (330)
T ss_pred             eEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeeccCCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCccc
Confidence            78999999999888765 789999999642    22233333345677889999998876554 6899999997643221


Q ss_pred             -----EEecCCCccEEEEEEcCCCCEEEEEcC-CCeEEEEEccC--C--eeeeeccCC------CCCeeEEEECCCCcEE
Q psy17610        331 -----SLEGSDVAAVNCVDFVDDGKYFLTGGA-DQIVKMWMYRE--G--VPCFVGIGH------AASITKIKISPDKKVI  394 (515)
Q Consensus       331 -----~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~i~d~~~--~--~~~~~~~~~------~~~i~~~~~~~~~~~l  394 (515)
                           ............++|+|+|+++++... ++.|.+|+++.  +  +.+..+..+      ......+.++|++++|
T Consensus       163 ~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~l  242 (330)
T PRK11028        163 AQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHL  242 (330)
T ss_pred             ccCCCceecCCCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEE
Confidence                 112222245678999999999988876 89999999973  2  223332211      1223468999999999


Q ss_pred             EEEeC-CCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeec-CCeEEEEecC
Q psy17610        395 VSVSA-DGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCST-NKMIDYWETC  471 (515)
Q Consensus       395 ~~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~v~iwd~~  471 (515)
                      +++.. ++.|.+|++........    +.....             .......+.++|+|++|+++.. +++|.+|++.
T Consensus       243 yv~~~~~~~I~v~~i~~~~~~~~----~~~~~~-------------~~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~  304 (330)
T PRK11028        243 YACDRTASLISVFSVSEDGSVLS----FEGHQP-------------TETQPRGFNIDHSGKYLIAAGQKSHHISVYEID  304 (330)
T ss_pred             EEecCCCCeEEEEEEeCCCCeEE----EeEEEe-------------ccccCCceEECCCCCEEEEEEccCCcEEEEEEc
Confidence            98864 78999999865321100    000000             0012456899999999998775 8899999874

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.89  E-value=4.4e-19  Score=161.04  Aligned_cols=245  Identities=11%  Similarity=0.101  Sum_probs=167.8

Q ss_pred             cCCCcEEEEEEecCCCEEEEEe-cCceEEEEECCCCceeEEe-eccCccCeEEEEeCCCCcEEEEEec-CCcEEEEeCCC
Q psy17610         79 KDDSGISSLQYNPVNNKVFVGT-VNCEIFLIDMNSGFTLTLV-NTCHTSAIYDLQFPVNFSSVFATCS-KNDIRIWSVRT  155 (515)
Q Consensus        79 ~~~~~v~~~~~s~~~~~l~~~~-~d~~i~iw~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~  155 (515)
                      .+.+....++++|++++|++++ .++.|.+|+++....+... .....+....++|+|+++++++++. ++.|.+|++++
T Consensus        32 ~~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~~~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~  111 (330)
T PRK11028         32 DVPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESPLPGSPTHISTDHQGRFLFSASYNANCVSVSPLDK  111 (330)
T ss_pred             ecCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeecCCCCceEEEECCCCCEEEEEEcCCCeEEEEEECC
Confidence            3456677899999999987765 4788999998732122111 1113345678999999999998886 88999999974


Q ss_pred             Cc----eeEEEEecCeEEEEEEEeeCCCEEEEEe-CCCeEEEEecCCCceEE-----EecCCCCCCeEEEEEcCCCCEEE
Q psy17610        156 LN----ELLRISVMNMICACIVFTYDGKAILSGW-NDGFIRCFTPQSGKLKF-----IIPNAHNRGVTALAITQDGTRLL  225 (515)
Q Consensus       156 ~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~~~~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~l~  225 (515)
                      ..    .+..+. +......++++|+++++++++ .++.|.+||+.+...+.     ............+.|+|+|++++
T Consensus       112 ~g~~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~ly  190 (330)
T PRK11028        112 DGIPVAPIQIIE-GLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQYAY  190 (330)
T ss_pred             CCCCCCceeecc-CCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecCCCCCCceEEECCCCCEEE
Confidence            32    222222 223457788999999886554 56999999997633221     11112234567899999999998


Q ss_pred             EecC-CCcEEEEEccCC--ceeeEEeeccc------cCceEEEEEecCCCEEEEEeC-CCcEEEEEcccce----EEEEE
Q psy17610        226 SGGG-EGQVRIWKLTRE--SQSLQCVLKEH------TSSVSVIQIKSDSKEAMSAST-DGTCVLWDLIKST----RLIIM  291 (515)
Q Consensus       226 ~~~~-d~~i~iw~~~~~--~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~----~~~~~  291 (515)
                      ++.. ++.|.+|+++..  .......+..+      ......+.++|++++++++.. ++.|.+|++....    .....
T Consensus       191 v~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~  270 (330)
T PRK11028        191 CVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVLSFEGHQ  270 (330)
T ss_pred             EEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEE
Confidence            8876 899999999632  22233333221      112335889999999988854 6899999985432    22333


Q ss_pred             EcCccEEEEEEcCCCcEEEEEEC-CCeEEEEeCC
Q psy17610        292 ILPSMIMSAAYHPSEVQLITCST-NKMIDYWETC  324 (515)
Q Consensus       292 ~~~~~~~~~~~~~~~~~l~~~~~-~~~i~~~d~~  324 (515)
                      ........+.++|++++|+++.. ++.|.+|++.
T Consensus       271 ~~~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~  304 (330)
T PRK11028        271 PTETQPRGFNIDHSGKYLIAAGQKSHHISVYEID  304 (330)
T ss_pred             eccccCCceEECCCCCEEEEEEccCCcEEEEEEc
Confidence            33335668899999999998776 8899999764

>KOG0322|consensus

Probab=99.89  E-value=1.8e-21  Score=154.39  Aligned_cols=291  Identities=19%  Similarity=0.240  Sum_probs=199.0

Q ss_pred             EEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCC
Q psy17610         75 LYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVR  154 (515)
Q Consensus        75 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~  154 (515)
                      +.+.+|.+.|+++.|..+++ |.+|..-|.+++|++.+......+...|...|+.+.--|+ ..+.+-+.|..+.+|++.
T Consensus         8 fvLRp~~~~v~s~~fqa~~r-L~sg~~~G~V~~w~lqt~r~~~~~r~~g~~~it~lq~~p~-d~l~tqgRd~~L~lw~ia   85 (323)
T KOG0322|consen    8 FVLRPHSSSVTSVLFQANER-LMSGLSVGIVKMWVLQTERDLPLIRLFGRLFITNLQSIPN-DSLDTQGRDPLLILWTIA   85 (323)
T ss_pred             eEeccccchheehhhccchh-hhcccccceEEEEEeecCccchhhhhhccceeeceeecCC-cchhhcCCCceEEEEEcc
Confidence            34558999999999997665 8999999999999999965555544468889999999998 588999999999999998


Q ss_pred             CCceeEEEEecCeEEEEEEEee-----CCC----EEEEEeCCC-eEEEEecCCCceEEEe---cCCCCCCeEEEEEcC-C
Q psy17610        155 TLNELLRISVMNMICACIVFTY-----DGK----AILSGWNDG-FIRCFTPQSGKLKFII---PNAHNRGVTALAITQ-D  220 (515)
Q Consensus       155 ~~~~~~~~~~~~~~v~~~~~~~-----~~~----~l~~~~~dg-~i~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~-~  220 (515)
                      -+..+..   |.-.+.++.|.+     +++    .++.-++.. .+++-|......+...   ..+..+.+.+..+.. +
T Consensus        86 ~s~~i~i---~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c  162 (323)
T KOG0322|consen   86 YSAFISI---HSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQDKDHAC  162 (323)
T ss_pred             CcceEEE---eeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceeeeeccccc
Confidence            6544332   333344444443     211    112111111 0111121111111111   023345567766543 3


Q ss_pred             CC--EEEEecCCCcEEEEEccCCce--------eeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEE
Q psy17610        221 GT--RLLSGGGEGQVRIWKLTRESQ--------SLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLII  290 (515)
Q Consensus       221 ~~--~l~~~~~d~~i~iw~~~~~~~--------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~  290 (515)
                      +.  ++++|.++|.+.+||+..+..        +.......|..+|.++.+.+.-..=++++.+..+..|++....    
T Consensus       163 ~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~----  238 (323)
T KOG0322|consen  163 GSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHST----  238 (323)
T ss_pred             cceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeecccc----
Confidence            33  456788899999999975421        2233345678888888887665555666666667666653211    


Q ss_pred             EEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCe
Q psy17610        291 MILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGV  370 (515)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~  370 (515)
                                                       ...+...++...+ -.+..+.+-||++.+|+++.|+.|+||..++..
T Consensus       239 ---------------------------------gslq~~~e~~lkn-pGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~  284 (323)
T KOG0322|consen  239 ---------------------------------GSLQIRKEITLKN-PGVSGVRIRPDGKILATAGWDHRIRVYSWRTLN  284 (323)
T ss_pred             ---------------------------------CcccccceEEecC-CCccceEEccCCcEEeecccCCcEEEEEeccCC
Confidence                                             0111111122222 567788899999999999999999999999999


Q ss_pred             eeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeC
Q psy17610        371 PCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTF  408 (515)
Q Consensus       371 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~  408 (515)
                      ++..+.-|...|++++|+|+...+|+++.|++|.+|++
T Consensus       285 pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL  322 (323)
T KOG0322|consen  285 PLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL  322 (323)
T ss_pred             chhhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence            99999999999999999999999999999999999986

>KOG1007|consensus

Probab=99.88  E-value=1.6e-20  Score=151.01  Aligned_cols=246  Identities=14%  Similarity=0.166  Sum_probs=186.1

Q ss_pred             EEEecCCCcEEEEEEec-CCCEEEEEecC-------ceEEEEECCCCcee---------EEeeccCccCeEEEEeCCCCc
Q psy17610         75 LYLLKDDSGISSLQYNP-VNNKVFVGTVN-------CEIFLIDMNSGFTL---------TLVNTCHTSAIYDLQFPVNFS  137 (515)
Q Consensus        75 ~~~~~~~~~v~~~~~s~-~~~~l~~~~~d-------~~i~iw~~~~~~~~---------~~~~~~h~~~v~~~~~~~~~~  137 (515)
                      ..+..|.+.|..++-+| +.+.|+++..+       ..+-||.+......         ...-..+-+.|.|+.|.|++.
T Consensus        57 kvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~Ldteavg~i~cvew~Pns~  136 (370)
T KOG1007|consen   57 KVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVASLDTEAVGKINCVEWEPNSD  136 (370)
T ss_pred             hhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhcCCHHHhCceeeEEEcCCCC
Confidence            34566889999999999 66677776542       34789998753221         122224566899999999988


Q ss_pred             EEEEEecCCcEEEEeCCCCce-eEEEE-----ecCeEEEEEEEee--CCCEEEEEeCCCeEEEEecCCCceEEEecCCCC
Q psy17610        138 SVFATCSKNDIRIWSVRTLNE-LLRIS-----VMNMICACIVFTY--DGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHN  209 (515)
Q Consensus       138 ~l~~~~~d~~i~iw~~~~~~~-~~~~~-----~~~~~v~~~~~~~--~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~  209 (515)
                      .+++.. |..|.+|+++.+.. +..+.     .+....++-+|+|  +++.+++. .|+++..||+++.+....+..+|.
T Consensus       137 klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt-~d~tl~~~D~RT~~~~~sI~dAHg  214 (370)
T KOG1007|consen  137 KLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATT-SDSTLQFWDLRTMKKNNSIEDAHG  214 (370)
T ss_pred             eeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEe-CCCcEEEEEccchhhhcchhhhhc
Confidence            877766 89999999998766 33332     2455678889998  67777665 588999999999999888889999


Q ss_pred             CCeEEEEEcCCCC-EEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecC-CCEEEEEeCCCcEEEEEcccce-
Q psy17610        210 RGVTALAITQDGT-RLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSD-SKEAMSASTDGTCVLWDLIKST-  286 (515)
Q Consensus       210 ~~v~~~~~~~~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~-  286 (515)
                      ..|..+.|+|+.+ +|++++.||.|++||.+ ....++..+.+|...|.++.|+|. .+++++++.|..|.+|....-. 
T Consensus       215 q~vrdlDfNpnkq~~lvt~gDdgyvriWD~R-~tk~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~svSS  293 (370)
T KOG1007|consen  215 QRVRDLDFNPNKQHILVTCGDDGYVRIWDTR-KTKFPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCASSVSS  293 (370)
T ss_pred             ceeeeccCCCCceEEEEEcCCCccEEEEecc-CCCccccccCCCceEEEEEEecCccceEEEecCCCceeEEEecccccc
Confidence            9999999999654 67899999999999998 456677889999999999999985 4678899999999999653211 


Q ss_pred             -----------------------------EEEEEEcCccEEEEEEcCCCcE-EEEEECCCeEEEEeC
Q psy17610        287 -----------------------------RLIIMILPSMIMSAAYHPSEVQ-LITCSTNKMIDYWET  323 (515)
Q Consensus       287 -----------------------------~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~i~~~d~  323 (515)
                                                   ....-.+...+++++|+.-..+ +++-+.||.+.|=.+
T Consensus       294 E~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPWiFASLSYDGRviIs~V  360 (370)
T KOG1007|consen  294 EQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPWIFASLSYDGRVIISSV  360 (370)
T ss_pred             ccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCCCeeEEEeccCceEEeecC
Confidence                                         0111123456899999886665 456678888877554

>KOG4497|consensus

Probab=99.88  E-value=7.8e-21  Score=155.60  Aligned_cols=343  Identities=10%  Similarity=0.093  Sum_probs=220.5

Q ss_pred             CcEEEEEEecCCCEEEEE-ecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec-CCcEEEEeCCCCcee
Q psy17610         82 SGISSLQYNPVNNKVFVG-TVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS-KNDIRIWSVRTLNEL  159 (515)
Q Consensus        82 ~~v~~~~~s~~~~~l~~~-~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~~  159 (515)
                      ..|.-+.|..|..+++++ ..++.|.+|++...+-..++.. ...++.+++|||||+.++..+. +-.|.+|.+.+.+..
T Consensus        49 dki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIde-g~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~  127 (447)
T KOG4497|consen   49 DKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDE-GQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGY  127 (447)
T ss_pred             HHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEecc-CCCcceeeeECCCcceEeeeecceeEEEEEEeccceeE
Confidence            456677788887776664 5688999999987555555544 6678999999999988888777 899999999886554


Q ss_pred             EEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEec---CCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEE
Q psy17610        160 LRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTP---QSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIW  236 (515)
Q Consensus       160 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw  236 (515)
                      . +.-.+..+..++|+|||++.+.+++..-...+++   ..-.....+ .-..-..+.+.|+|||+.|++         |
T Consensus       128 ~-~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~~W~ll~~f-~~dT~DltgieWsPdg~~laV---------w  196 (447)
T KOG4497|consen  128 L-LPHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSCKAWILLKEF-KLDTIDLTGIEWSPDGNWLAV---------W  196 (447)
T ss_pred             E-ecccccCceeEEECCCCceeeeeecccHHHHHHHHhhHHHHHHHhc-CCCcccccCceECCCCcEEEE---------e
Confidence            3 3334445688999999999888876422211221   122233333 334556788999999987774         4


Q ss_pred             EccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCcc--------------------
Q psy17610        237 KLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSM--------------------  296 (515)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~--------------------  296 (515)
                      |--   .+.........-.+..++|+|.+++++.|+.|+.+++.+--+-+....+.+...                    
T Consensus       197 d~~---Leykv~aYe~~lG~k~v~wsP~~qflavGsyD~~lrvlnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~  273 (447)
T KOG4497|consen  197 DNV---LEYKVYAYERGLGLKFVEWSPCNQFLAVGSYDQMLRVLNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLL  273 (447)
T ss_pred             cch---hhheeeeeeeccceeEEEeccccceEEeeccchhhhhhceeeeeehhhhccchhccCchhhhhhhhhcchhhhc
Confidence            421   110100111234678899999999999999999999987655555444433221                    


Q ss_pred             EEEEEEcCCCcEEEEEECCCeEEEEeCC-------CCceEEEEecCCCccEEEEEEcCCCCEEEEEcCC--CeEEEEEcc
Q psy17610        297 IMSAAYHPSEVQLITCSTNKMIDYWETC-------DGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGAD--QIVKMWMYR  367 (515)
Q Consensus       297 ~~~~~~~~~~~~l~~~~~~~~i~~~d~~-------~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--g~i~i~d~~  367 (515)
                      ..++.|.|..--.-..-..  =.+|...       ..++...+..+ .-.+..++|++|..++++-...  +.+-+||++
T Consensus       274 ~~cLsf~p~~~~a~~~~~s--e~~YE~~~~pv~~~~lkp~tD~pnP-k~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq  350 (447)
T KOG4497|consen  274 HHCLSFTPTDLEAHIWEES--ETIYEQQMTPVKVHKLKPPTDFPNP-KCGAGKLAFSCDSTYAATRNDKYPNALWLWDLQ  350 (447)
T ss_pred             ccccccCCCccccCccccc--hhhhhhhhcceeeecccCCCCCCCc-ccccceeeecCCceEEeeecCCCCceEEEEech
Confidence            2233333321100000000  0011111       11111122222 2567789999999999887643  579999998


Q ss_pred             CCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEe
Q psy17610        368 EGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSA  447 (515)
Q Consensus       368 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  447 (515)
                      ..+....+ ....+|....|+|....|+.+.....+++|.........                     .....-.|..+
T Consensus       351 ~l~l~avL-iQk~piraf~WdP~~prL~vctg~srLY~W~psg~~~V~---------------------vP~~GF~i~~l  408 (447)
T KOG4497|consen  351 NLKLHAVL-IQKHPIRAFEWDPGRPRLVVCTGKSRLYFWAPSGPRVVG---------------------VPKKGFNIQKL  408 (447)
T ss_pred             hhhhhhhh-hhccceeEEEeCCCCceEEEEcCCceEEEEcCCCceEEe---------------------cCCCCceeeeE
Confidence            86655544 456789999999999999998888889999765421100                     00111238899


Q ss_pred             eeccCCcEEEEeecCCe
Q psy17610        448 AYHPSEVQLITCSTNKM  464 (515)
Q Consensus       448 ~~s~~~~~l~~~~~dg~  464 (515)
                      +|.-+|..++..+.|..
T Consensus       409 ~W~~~g~~i~l~~kDaf  425 (447)
T KOG4497|consen  409 QWLQPGEFIVLCGKDAF  425 (447)
T ss_pred             EecCCCcEEEEEcCCce
Confidence            99999999988887753

>KOG4227|consensus

Probab=99.88  E-value=8.1e-21  Score=159.13  Aligned_cols=310  Identities=12%  Similarity=0.119  Sum_probs=225.9

Q ss_pred             EEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCC------CceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcE
Q psy17610        160 LRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQS------GKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQV  233 (515)
Q Consensus       160 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i  233 (515)
                      +.+.+|.+.|.++.|+.++++|++|+.|..+++|+++.      .+++......|...|.|++|.....++.+|..+++|
T Consensus        50 KD~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~V  129 (609)
T KOG4227|consen   50 KDVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTV  129 (609)
T ss_pred             hhhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCccee
Confidence            34567899999999999999999999999999999753      355666656788999999999999999999999999


Q ss_pred             EEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccce----EEEEEEcCccEEEEEEcCCC-cE
Q psy17610        234 RIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKST----RLIIMILPSMIMSAAYHPSE-VQ  308 (515)
Q Consensus       234 ~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~----~~~~~~~~~~~~~~~~~~~~-~~  308 (515)
                      ...|+.+.....+..-....+.|..+..+|-.+.|++.+.++.|.+||.+..+    +......+.....+.|+|.. .+
T Consensus       130 I~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P~L  209 (609)
T KOG4227|consen  130 IKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPETPAL  209 (609)
T ss_pred             EeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeecCCCcee
Confidence            99999654433333333445689999999999999999999999999998654    23333445578889999975 45


Q ss_pred             EEEEECCCeEEEEeCCCCceE-EEEe---cCC--CccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCC---
Q psy17610        309 LITCSTNKMIDYWETCDGSII-RSLE---GSD--VAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHA---  379 (515)
Q Consensus       309 l~~~~~~~~i~~~d~~~~~~~-~~~~---~~~--~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---  379 (515)
                      +++.+..+-+-+||.+..... ....   +-.  ...-....|+|+|+.+.+--....-.+||+.+.++...-..|.   
T Consensus       210 i~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~~V~k~D~N~~G  289 (609)
T KOG4227|consen  210 ILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQRCFVLKSDHNPNG  289 (609)
T ss_pred             EEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCCEEeeeecccceeEeccCCCCc
Confidence            667778888999998765421 1111   111  1122467899999998887776667788887744332222332   


Q ss_pred             ----CCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCccc---ceeeecccccccceeeecCcccEEEeeeccC
Q psy17610        380 ----ASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSL---SSKISRSTARSTRLIIMILPSMIMSAAYHPS  452 (515)
Q Consensus       380 ----~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~  452 (515)
                          ..+.+++|..|.. +++|+.+-.|++|.++...........-   ..............++.+|.+.++.+.|+|.
T Consensus       290 Y~N~~T~KS~~F~~D~~-v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~~~~VLrGHRSv~NQVRF~~H  368 (609)
T KOG4227|consen  290 YCNIKTIKSMTFIDDYT-VATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEKELTVLRGHRSVPNQVRFSQH  368 (609)
T ss_pred             ceeeeeeeeeeeeccee-eeccCcccceEEEecCCCccccCccccCcchhhCchhheecceeEEEecccccccceeecCC
Confidence                3466788876554 9999999999999998765433211100   0001111123344567889999999999999


Q ss_pred             CcEEEEeecCCeEEEEec
Q psy17610        453 EVQLITCSTNKMIDYWET  470 (515)
Q Consensus       453 ~~~l~~~~~dg~v~iwd~  470 (515)
                      ..+|++.+-...+++|.-
T Consensus       369 ~~~l~SSGVE~~~KlWS~  386 (609)
T KOG4227|consen  369 NNLLVSSGVENSFKLWSD  386 (609)
T ss_pred             cceEeccchhhheecccc
Confidence            999999999999999974

>KOG0649|consensus

Probab=99.88  E-value=2.1e-19  Score=141.03  Aligned_cols=283  Identities=18%  Similarity=0.217  Sum_probs=201.2

Q ss_pred             cEEEEEEecCCCEEEEEecCceEEEEECCC---------CceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeC
Q psy17610         83 GISSLQYNPVNNKVFVGTVNCEIFLIDMNS---------GFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSV  153 (515)
Q Consensus        83 ~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~---------~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~  153 (515)
                      .|.+-+++|.+++|++|..+|.|.+..+++         |+......++|.++|+.++|..+  .|++ +.||.|+=|..
T Consensus        12 tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~d~--~Lls-~gdG~V~gw~W   88 (325)
T KOG0649|consen   12 TVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFHDD--FLLS-GGDGLVYGWEW   88 (325)
T ss_pred             HHHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeeehh--heee-ccCceEEEeee
Confidence            355668999999999999999999999864         33344445788889999998832  4444 44588888876


Q ss_pred             CCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcE
Q psy17610        154 RTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQV  233 (515)
Q Consensus       154 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i  233 (515)
                      ....+-                           .+.=++|.+........   ..-..|+++...|..+-++.++.|+.+
T Consensus        89 ~E~~es---------------------------~~~K~lwe~~~P~~~~~---~evPeINam~ldP~enSi~~AgGD~~~  138 (325)
T KOG0649|consen   89 NEEEES---------------------------LATKRLWEVKIPMQVDA---VEVPEINAMWLDPSENSILFAGGDGVI  138 (325)
T ss_pred             hhhhhh---------------------------ccchhhhhhcCccccCc---ccCCccceeEeccCCCcEEEecCCeEE
Confidence            543221                           11223444332221111   123468999999987778888899999


Q ss_pred             EEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCcc---------EEEEEEcC
Q psy17610        234 RIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSM---------IMSAAYHP  304 (515)
Q Consensus       234 ~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~---------~~~~~~~~  304 (515)
                      +-||+  ++++....+++|++.|.++.--.....+++|++||++++||.++++.+..+.....         -.-.+..-
T Consensus       139 y~~dl--E~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~  216 (325)
T KOG0649|consen  139 YQVDL--EDGRIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAV  216 (325)
T ss_pred             EEEEe--cCCEEEEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEec
Confidence            99999  56778889999999999999866667899999999999999999998887754321         11134444


Q ss_pred             CCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeE
Q psy17610        305 SEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITK  384 (515)
Q Consensus       305 ~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~  384 (515)
                      +..++++| ....+.+|.+++.++...+..+  .++..+.|..|  .++++++.+.+.-|.+ +|......+......++
T Consensus       217 ~edWlvCG-gGp~lslwhLrsse~t~vfpip--a~v~~v~F~~d--~vl~~G~g~~v~~~~l-~Gvl~a~ip~~s~~c~s  290 (325)
T KOG0649|consen  217 NEDWLVCG-GGPKLSLWHLRSSESTCVFPIP--ARVHLVDFVDD--CVLIGGEGNHVQSYTL-NGVLQANIPVESTACYS  290 (325)
T ss_pred             cCceEEec-CCCceeEEeccCCCceEEEecc--cceeEeeeecc--eEEEeccccceeeeee-ccEEEEeccCCccceee
Confidence            56677665 4567999999999999888876  67888888654  6778888888999987 45555555555555666


Q ss_pred             EEECCCC-cEEEEEeCCCcEEEE
Q psy17610        385 IKISPDK-KVIVSVSADGGIFLW  406 (515)
Q Consensus       385 ~~~~~~~-~~l~~~~~dg~i~iw  406 (515)
                      ..|+... ++|-.++....+.++
T Consensus       291 ~s~~~~p~k~~s~ag~s~~~~i~  313 (325)
T KOG0649|consen  291 ASWQTSPIKFISIAGFSNKLHIL  313 (325)
T ss_pred             ecccCCceEEEEecccceeeeee
Confidence            6665443 444455566666665

>KOG4227|consensus

Probab=99.88  E-value=1.9e-20  Score=156.95  Aligned_cols=290  Identities=15%  Similarity=0.192  Sum_probs=219.2

Q ss_pred             eccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCC------CceeEEEE-ecCeEEEEEEEeeCCCEEEEEeCCCeEEE
Q psy17610        120 NTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRT------LNELLRIS-VMNMICACIVFTYDGKAILSGWNDGFIRC  192 (515)
Q Consensus       120 ~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~------~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~~  192 (515)
                      +.+|.+.|.++.|+.++++|++++.|..+++|+++.      .+++.... .|...|.|++|......+++|..+++|..
T Consensus        52 ~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~  131 (609)
T KOG4227|consen   52 VREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIK  131 (609)
T ss_pred             hhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcceeEe
Confidence            446999999999999999999999999999999863      34444333 34578999999999999999999999999


Q ss_pred             EecCCCceEEEecC-CCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEE-eeccccCceEEEEEecCC-CEEE
Q psy17610        193 FTPQSGKLKFIIPN-AHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQC-VLKEHTSSVSVIQIKSDS-KEAM  269 (515)
Q Consensus       193 ~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~-~~l~  269 (515)
                      .|+++.+.+..... ...+.|..+..+|-.+.|++.+.++.|.+||.+........ .+.........+.|+|.. .+|+
T Consensus       132 HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P~Li~  211 (609)
T KOG4227|consen  132 HDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPETPALIL  211 (609)
T ss_pred             eecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeecCCCceeEE
Confidence            99999998877621 12348999999998899999999999999999754322221 223344567788899864 5667


Q ss_pred             EEeCCCcEEEEEcccceEEEE-----EEcCc---cEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEE-EEecCC----
Q psy17610        270 SASTDGTCVLWDLIKSTRLII-----MILPS---MIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIR-SLEGSD----  336 (515)
Q Consensus       270 ~~~~d~~i~iwd~~~~~~~~~-----~~~~~---~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~-~~~~~~----  336 (515)
                      +.+..+-+.+||.+.......     ...+.   .-++..|+|+|..+++.-....-.+||+.+.++.. ++....    
T Consensus       212 ~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~~V~k~D~N~~GY~  291 (609)
T KOG4227|consen  212 VNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQRCFVLKSDHNPNGYC  291 (609)
T ss_pred             eccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCCEEeeeecccceeEeccCCCCcce
Confidence            788888999999876543211     11222   34778999999999887777777788887755432 332111    


Q ss_pred             -CccEEEEEEcCCCCEEEEEcCCCeEEEEEccCC-----------------------eeeeeccCCCCCeeEEEECCCCc
Q psy17610        337 -VAAVNCVDFVDDGKYFLTGGADQIVKMWMYREG-----------------------VPCFVGIGHAASITKIKISPDKK  392 (515)
Q Consensus       337 -~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-----------------------~~~~~~~~~~~~i~~~~~~~~~~  392 (515)
                       ...+.+++|..|- .+++|+.+-.|++|.+...                       +.+..+++|..-++.+.|+|...
T Consensus       292 N~~T~KS~~F~~D~-~v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~~~~VLrGHRSv~NQVRF~~H~~  370 (609)
T KOG4227|consen  292 NIKTIKSMTFIDDY-TVATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEKELTVLRGHRSVPNQVRFSQHNN  370 (609)
T ss_pred             eeeeeeeeeeecce-eeeccCcccceEEEecCCCccccCccccCcchhhCchhheecceeEEEecccccccceeecCCcc
Confidence             1235567777654 4899999999999987521                       23456789999999999999999


Q ss_pred             EEEEEeCCCcEEEEeCCC
Q psy17610        393 VIVSVSADGGIFLWTFPE  410 (515)
Q Consensus       393 ~l~~~~~dg~i~iw~~~~  410 (515)
                      +|++.+-...+++|.-..
T Consensus       371 ~l~SSGVE~~~KlWS~~r  388 (609)
T KOG4227|consen  371 LLVSSGVENSFKLWSDHR  388 (609)
T ss_pred             eEeccchhhheecccccc
Confidence            999999999999997543

>KOG0307|consensus

Probab=99.87  E-value=8.2e-22  Score=187.05  Aligned_cols=281  Identities=15%  Similarity=0.213  Sum_probs=212.8

Q ss_pred             EEEEEcCCCC-EEEEe----------cCCCcEEEEEccCCcee----eEEeeccccCceEEEEEecCCCE----EEEEeC
Q psy17610        213 TALAITQDGT-RLLSG----------GGEGQVRIWKLTRESQS----LQCVLKEHTSSVSVIQIKSDSKE----AMSAST  273 (515)
Q Consensus       213 ~~~~~~~~~~-~l~~~----------~~d~~i~iw~~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~----l~~~~~  273 (515)
                      ..++|+|.+. ++++|          +.+.++.+|.+......    ....+. -......++|.+.+..    ++.|.+
T Consensus        10 a~~awSp~~~~~laagt~aq~~D~sfst~~slEifeld~~~~~~dlk~~~s~~-s~~rF~kL~W~~~g~~~~GlIaGG~e   88 (1049)
T KOG0307|consen   10 ATFAWSPASPPLLAAGTAAQQFDASFSTSASLEIFELDFSDESSDLKPVGSLQ-SSNRFNKLAWGSYGSHSHGLIAGGLE   88 (1049)
T ss_pred             ceEEecCCCchhhHHHhhhhccccccccccccceeeecccCcccccccccccc-ccccceeeeecccCCCccceeecccc
Confidence            3568888775 44443          33556777766433222    222222 2456788999887766    888899


Q ss_pred             CCcEEEEEcccc---eEE----EEEEcCccEEEEEEcCCCc-EEEEEECCCeEEEEeCCCCceEEEEe-cCCCccEEEEE
Q psy17610        274 DGTCVLWDLIKS---TRL----IIMILPSMIMSAAYHPSEV-QLITCSTNKMIDYWETCDGSIIRSLE-GSDVAAVNCVD  344 (515)
Q Consensus       274 d~~i~iwd~~~~---~~~----~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~i~~~~  344 (515)
                      ||.|.+||...-   ...    ..-.+.+.|..+.|++... .|++|+.+|.|.|||+...+...... ......|.+++
T Consensus        89 dG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~ls  168 (1049)
T KOG0307|consen   89 DGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLS  168 (1049)
T ss_pred             CCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEec
Confidence            999999998652   111    1224667899999999765 99999999999999998866555542 22347899999


Q ss_pred             EcC-CCCEEEEEcCCCeEEEEEccCCeeeeeccCCCC--CeeEEEECCCC-cEEEEEeCCC---cEEEEeCCCCcCccCC
Q psy17610        345 FVD-DGKYFLTGGADQIVKMWMYREGVPCFVGIGHAA--SITKIKISPDK-KVIVSVSADG---GIFLWTFPELEDDVGD  417 (515)
Q Consensus       345 ~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~i~~~~~~~~~-~~l~~~~~dg---~i~iw~~~~~~~~~~~  417 (515)
                      |+. ....|++++.+|.+.|||++..+++..+..+..  .+..++|+|+. ..|++++.|.   .|.+||++...     
T Consensus       169 WNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~as-----  243 (1049)
T KOG0307|consen  169 WNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFAS-----  243 (1049)
T ss_pred             cchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccC-----
Confidence            987 456788999999999999999888877766654  47789999965 4566666654   59999987643     


Q ss_pred             CcccceeeecccccccceeeecCcccEEEeeeccCC-cEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCC
Q psy17610        418 SRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSE-VQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDG  496 (515)
Q Consensus       418 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~  496 (515)
                                    .....+..|...|.++.|++.+ ++|++++.|+.|.+|+.++++.+..+.... ..+..+.|+|..
T Consensus       244 --------------sP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~~~-nW~fdv~w~pr~  308 (1049)
T KOG0307|consen  244 --------------SPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPAQG-NWCFDVQWCPRN  308 (1049)
T ss_pred             --------------CchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCCCC-cceeeeeecCCC
Confidence                          2223345688889999999977 789999999999999999999999998855 889999999987


Q ss_pred             c-EEEEeecCCeEEEEEEe
Q psy17610        497 K-YFLTGGADQIVKICLYI  514 (515)
Q Consensus       497 ~-~l~s~~~dg~v~iw~~~  514 (515)
                      . .++.++-||.|.|+.+.
T Consensus       309 P~~~A~asfdgkI~I~sl~  327 (1049)
T KOG0307|consen  309 PSVMAAASFDGKISIYSLQ  327 (1049)
T ss_pred             cchhhhheeccceeeeeee
Confidence            6 77788999999999763

>KOG1524|consensus

Probab=99.87  E-value=6e-20  Score=160.12  Aligned_cols=264  Identities=14%  Similarity=0.190  Sum_probs=191.6

Q ss_pred             cCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeC-------CCCcEEEEEecCCcEEEE
Q psy17610         79 KDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFP-------VNFSSVFATCSKNDIRIW  151 (515)
Q Consensus        79 ~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~-------~~~~~l~~~~~d~~i~iw  151 (515)
                      .|...|.|+.|+.....+.+++.+..+.-||+.+......... ...--+.+-.-       .....++.+++||.+.|.
T Consensus        12 r~~e~vc~v~w~~~eei~~~~dDh~~~~~~~~~~~s~~~~~~p-~df~pt~~h~~~rs~~~g~~~d~~~i~s~DGkf~il   90 (737)
T KOG1524|consen   12 RNSEKVCCVDWSSNEEIYFVSDDHQIFKWSDVSRDSVEVAKLP-DDFVPTDMHLGGRSSGGGKGSDTLLICSNDGRFVIL   90 (737)
T ss_pred             ccceeEEeecccccceEEEeccCceEEEeecccchhhhhhhCC-cccCCccccccccccCCCCCcceEEEEcCCceEEEe
Confidence            3667778999998887777666554444455544222111111 11111111111       122578888899999998


Q ss_pred             eCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCC
Q psy17610        152 SVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEG  231 (515)
Q Consensus       152 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~  231 (515)
                      + +.++....+..|.+.+.+-.|+|||.-|+++++||.|++|. ++|-...++ .....+|.|++|.|+.+.++.+.. +
T Consensus        91 ~-k~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWS-rsGMLRStl-~Q~~~~v~c~~W~p~S~~vl~c~g-~  166 (737)
T KOG1524|consen   91 N-KSARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWS-RSGMLRSTV-VQNEESIRCARWAPNSNSIVFCQG-G  166 (737)
T ss_pred             c-ccchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEe-ccchHHHHH-hhcCceeEEEEECCCCCceEEecC-C
Confidence            7 45677778889999999999999999999999999999998 445444444 456778999999998776665544 4


Q ss_pred             cEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEE
Q psy17610        232 QVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLIT  311 (515)
Q Consensus       232 ~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  311 (515)
                      .+.|=.+.  ........+.|.+-|.++.|++..+.+++|++|-..++||-..........+..++++++|+|+ ..++.
T Consensus       167 h~~IKpL~--~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~G~~Lf~S~~~ey~ITSva~npd-~~~~v  243 (737)
T KOG1524|consen  167 HISIKPLA--ANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQGANLFTSAAEEYAITSVAFNPE-KDYLL  243 (737)
T ss_pred             eEEEeecc--cccceeEEeccCcEEEEeecCccccceeecCCceeEEeecccCcccccCChhccceeeeeeccc-cceee
Confidence            56666663  2333456789999999999999999999999999999999765555555566779999999999 55555


Q ss_pred             EECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEE
Q psy17610        312 CSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKM  363 (515)
Q Consensus       312 ~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i  363 (515)
                      ++.+ +++            +..+..+.|..++||+||..+++|+..|.+.+
T Consensus       244 ~S~n-t~R------------~~~p~~GSifnlsWS~DGTQ~a~gt~~G~v~~  282 (737)
T KOG1524|consen  244 WSYN-TAR------------FSSPRVGSIFNLSWSADGTQATCGTSTGQLIV  282 (737)
T ss_pred             eeee-eee------------ecCCCccceEEEEEcCCCceeeccccCceEEE
Confidence            5443 222            44555588999999999999999999887655

>KOG1524|consensus

Probab=99.87  E-value=1.4e-20  Score=164.09  Aligned_cols=265  Identities=14%  Similarity=0.194  Sum_probs=195.4

Q ss_pred             ecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcC-------CCCEEEEecCCCcEEEE
Q psy17610        164 VMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQ-------DGTRLLSGGGEGQVRIW  236 (515)
Q Consensus       164 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-------~~~~l~~~~~d~~i~iw  236 (515)
                      .|...+.|+.|+.+...+.+++++..+.-||+.+... .....+.+.-.+.+..-+       ....|+.++.||.+.+.
T Consensus        12 r~~e~vc~v~w~~~eei~~~~dDh~~~~~~~~~~~s~-~~~~~p~df~pt~~h~~~rs~~~g~~~d~~~i~s~DGkf~il   90 (737)
T KOG1524|consen   12 RNSEKVCCVDWSSNEEIYFVSDDHQIFKWSDVSRDSV-EVAKLPDDFVPTDMHLGGRSSGGGKGSDTLLICSNDGRFVIL   90 (737)
T ss_pred             ccceeEEeecccccceEEEeccCceEEEeecccchhh-hhhhCCcccCCccccccccccCCCCCcceEEEEcCCceEEEe
Confidence            3555567888888776666555444444455543322 111112211112222211       23478888999999998


Q ss_pred             EccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCC
Q psy17610        237 KLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNK  316 (515)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  316 (515)
                      +-   ..+.......|.+.+.+-.|+|||.-|+++++||.|++|.-...-.....+...++++++|.|+.+.++.+ ..+
T Consensus        91 ~k---~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrsGMLRStl~Q~~~~v~c~~W~p~S~~vl~c-~g~  166 (737)
T KOG1524|consen   91 NK---SARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRSGMLRSTVVQNEESIRCARWAPNSNSIVFC-QGG  166 (737)
T ss_pred             cc---cchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEeccchHHHHHhhcCceeEEEEECCCCCceEEe-cCC
Confidence            74   55666778899999999999999999999999999999986444333344566789999999998877665 445


Q ss_pred             eEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEE
Q psy17610        317 MIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVS  396 (515)
Q Consensus       317 ~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~  396 (515)
                      .+.+=.+.....+...+.|. +-|.++.|++..+++++|++|-..++||. .|..+..-..|+.+|++++|.|+ +.++.
T Consensus       167 h~~IKpL~~n~k~i~WkAHD-GiiL~~~W~~~s~lI~sgGED~kfKvWD~-~G~~Lf~S~~~ey~ITSva~npd-~~~~v  243 (737)
T KOG1524|consen  167 HISIKPLAANSKIIRWRAHD-GLVLSLSWSTQSNIIASGGEDFRFKIWDA-QGANLFTSAAEEYAITSVAFNPE-KDYLL  243 (737)
T ss_pred             eEEEeecccccceeEEeccC-cEEEEeecCccccceeecCCceeEEeecc-cCcccccCChhccceeeeeeccc-cceee
Confidence            67777777777778888877 89999999999999999999999999997 56778888899999999999999 55666


Q ss_pred             EeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEE
Q psy17610        397 VSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYW  468 (515)
Q Consensus       397 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iw  468 (515)
                      ++.+ ++++=..+                               .+.|..++||+||..+++|+..|.+.+-
T Consensus       244 ~S~n-t~R~~~p~-------------------------------~GSifnlsWS~DGTQ~a~gt~~G~v~~A  283 (737)
T KOG1524|consen  244 WSYN-TARFSSPR-------------------------------VGSIFNLSWSADGTQATCGTSTGQLIVA  283 (737)
T ss_pred             eeee-eeeecCCC-------------------------------ccceEEEEEcCCCceeeccccCceEEEe
Confidence            6543 45532211                               2449999999999999999999987654

>KOG2110|consensus

Probab=99.87  E-value=1.2e-18  Score=145.36  Aligned_cols=317  Identities=13%  Similarity=0.128  Sum_probs=217.3

Q ss_pred             CCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecC--CcEEEEeCCCCce
Q psy17610         81 DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSK--NDIRIWSVRTLNE  158 (515)
Q Consensus        81 ~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d--~~i~iw~~~~~~~  158 (515)
                      ...+..+.|+.+...|..|+.|| .++|+.+.-.+.... ......|..+-|+..  .++..+.+  +.+++.+.+.+..
T Consensus         5 ~~ti~~~~~Nqd~~~lsvGs~~G-yk~~~~~~~~k~~~~-~~~~~~IvEmLFSSS--LvaiV~~~qpr~Lkv~~~Kk~~~   80 (391)
T KOG2110|consen    5 KPTINFIGFNQDSTLLSVGSKDG-YKIFSCSPFEKCFSK-DTEGVSIVEMLFSSS--LVAIVSIKQPRKLKVVHFKKKTT   80 (391)
T ss_pred             CcceeeeeeccceeEEEccCCCc-eeEEecCchHHhhcc-cCCCeEEEEeecccc--eeEEEecCCCceEEEEEcccCce
Confidence            34567777999999999999997 778888763332111 113345667778765  66666653  4599999988887


Q ss_pred             eEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCC--CCCCeEEEEEcCCCCEEEEe--cCCCcEE
Q psy17610        159 LLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNA--HNRGVTALAITQDGTRLLSG--GGEGQVR  234 (515)
Q Consensus       159 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~--~~d~~i~  234 (515)
                      +..+.. ..+|.++.++  .++|+++-.+. |.|||+++.+++.++...  +...+.++++++.+.+++.-  ...|.|.
T Consensus        81 ICe~~f-pt~IL~VrmN--r~RLvV~Lee~-IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~  156 (391)
T KOG2110|consen   81 ICEIFF-PTSILAVRMN--RKRLVVCLEES-IYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVV  156 (391)
T ss_pred             EEEEec-CCceEEEEEc--cceEEEEEccc-EEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEE
Confidence            777764 4467777775  45677776655 999999999998887543  55667777777777788853  3468999


Q ss_pred             EEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCc-EEEEEcccceEEEEEEcC---ccEEEEEEcCCCcEEE
Q psy17610        235 IWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGT-CVLWDLIKSTRLIIMILP---SMIMSAAYHPSEVQLI  310 (515)
Q Consensus       235 iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~  310 (515)
                      +||.  .+.+....+..|.+++.+++|+++|.+++++++.|+ ||++.+.+++.+..+...   ..|.+++|+|++++|.
T Consensus       157 l~d~--~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~  234 (391)
T KOG2110|consen  157 LFDT--INLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLA  234 (391)
T ss_pred             EEEc--ccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEE
Confidence            9999  566777888999999999999999999999999987 689999999999988755   4699999999999999


Q ss_pred             EEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCC-CCeeEEEECC
Q psy17610        311 TCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHA-ASITKIKISP  389 (515)
Q Consensus       311 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~i~~~~~~~  389 (515)
                      +.+..++|++|.+.... ......+....-..-.++   +.+.+---.+.-.+||....-....+.... ..+..+.-.+
T Consensus       235 ~sS~TeTVHiFKL~~~~-~~~~~~p~~~~~~~~~~s---k~~~sylps~V~~~~~~~R~FAt~~l~~s~~~~~~~l~~~~  310 (391)
T KOG2110|consen  235 ASSNTETVHIFKLEKVS-NNPPESPTAGTSWFGKVS---KAATSYLPSQVSSVLDQSRKFATAKLPESGRKNICSLSSIQ  310 (391)
T ss_pred             EecCCCeEEEEEecccc-cCCCCCCCCCCcccchhh---hhhhhhcchhhhhhhhhccceeEEEccCCCccceEEeeccC
Confidence            99999999999986654 111110000000000111   001000001122235543322222222221 1333333335


Q ss_pred             CCcEEEEEeCCCcEEEEeCCCC
Q psy17610        390 DKKVIVSVSADGGIFLWTFPEL  411 (515)
Q Consensus       390 ~~~~l~~~~~dg~i~iw~~~~~  411 (515)
                      ...++..++.||.+..|.++..
T Consensus       311 ~~~~v~vas~dG~~y~y~l~~~  332 (391)
T KOG2110|consen  311 KIPRVLVASYDGHLYSYRLPPK  332 (391)
T ss_pred             CCCEEEEEEcCCeEEEEEcCCC
Confidence            7788999999999999998764

>KOG0642|consensus

Probab=99.87  E-value=3.3e-21  Score=168.97  Aligned_cols=262  Identities=20%  Similarity=0.343  Sum_probs=198.0

Q ss_pred             eEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCC--------CceeEEEEecCeEEEEEEEeeCCCEEEEEeCC
Q psy17610        116 LTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRT--------LNELLRISVMNMICACIVFTYDGKAILSGWND  187 (515)
Q Consensus       116 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~--------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  187 (515)
                      +...+..|...|+.++|+|-...|++++.|+.+++|+++.        -+++.++.+|.++|.|+++.+++.++++|+.|
T Consensus       286 ik~tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~D  365 (577)
T KOG0642|consen  286 IKFTLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGID  365 (577)
T ss_pred             eeeeeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccC
Confidence            3445667999999999999999999999999999999932        24688899999999999999999999999999


Q ss_pred             CeEEEEecCCCc---------eEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEE
Q psy17610        188 GFIRCFTPQSGK---------LKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSV  258 (515)
Q Consensus       188 g~i~~~~~~~~~---------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~  258 (515)
                      |.|+.|++....         .+.....+|.+.+..+++++....|++++.||+++.|+...... +........+.-.+
T Consensus       366 g~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~-~~f~~~~e~g~Pls  444 (577)
T KOG0642|consen  366 GTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP-CTFGEPKEHGYPLS  444 (577)
T ss_pred             ceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCc-cccCCccccCCcce
Confidence            999999654221         22223369999999999999888999999999999999854333 11111112222344


Q ss_pred             EEEecCC-CEEEEEeCCCcEEEEEcccceEEEEEEcC--------ccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceE
Q psy17610        259 IQIKSDS-KEAMSASTDGTCVLWDLIKSTRLIIMILP--------SMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSII  329 (515)
Q Consensus       259 ~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~--------~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~  329 (515)
                      +.+.... ...++...-+.-.+.++........+...        ..+..+.++|.....+++..++.|+++|..+++++
T Consensus       445 vd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~~l  524 (577)
T KOG0642|consen  445 VDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKTGKIL  524 (577)
T ss_pred             EeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceecccccccccc
Confidence            4443322 12222222233334444444444443321        24677889999999999999999999999999999


Q ss_pred             EEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCC
Q psy17610        330 RSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHA  379 (515)
Q Consensus       330 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~  379 (515)
                      .....+. ..++++++.|+|.+|++++.|+.+++|.+....++.....|.
T Consensus       525 ~s~~a~~-~svtslai~~ng~~l~s~s~d~sv~l~kld~k~~~~es~~~r  573 (577)
T KOG0642|consen  525 HSMVAHK-DSVTSLAIDPNGPYLMSGSHDGSVRLWKLDVKTCVLESTAHR  573 (577)
T ss_pred             hheeecc-ceecceeecCCCceEEeecCCceeehhhccchheeecccccc
Confidence            9988877 899999999999999999999999999997776666655554

>KOG0642|consensus

Probab=99.87  E-value=2.6e-21  Score=169.66  Aligned_cols=248  Identities=20%  Similarity=0.284  Sum_probs=194.4

Q ss_pred             EEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCC--------CceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCc
Q psy17610        161 RISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQS--------GKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQ  232 (515)
Q Consensus       161 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~--------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~  232 (515)
                      ++..|...++.+.|.|....|++++.||.+.+|+++.        -+++.++ .+|.++|.|+++.+++..+++|+.||+
T Consensus       289 tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tf-raH~gPVl~v~v~~n~~~~ysgg~Dg~  367 (577)
T KOG0642|consen  289 TLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTF-RAHEGPVLCVVVPSNGEHCYSGGIDGT  367 (577)
T ss_pred             eeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEE-ecccCceEEEEecCCceEEEeeccCce
Confidence            5556778889999999999999999999999999932        2345666 799999999999999999999999999


Q ss_pred             EEEEEccCC--------ceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEE---cCccEEEEE
Q psy17610        233 VRIWKLTRE--------SQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMI---LPSMIMSAA  301 (515)
Q Consensus       233 i~iw~~~~~--------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~---~~~~~~~~~  301 (515)
                      |+.|++...        .......+.||.+.++.+++++....|++++.||+++.|+.....+ ..+.   ......++.
T Consensus       368 I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~-~~f~~~~e~g~Plsvd  446 (577)
T KOG0642|consen  368 IRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP-CTFGEPKEHGYPLSVD  446 (577)
T ss_pred             eeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCc-cccCCccccCCcceEe
Confidence            999976421        1234556789999999999999999999999999999999876655 2222   222344455


Q ss_pred             EcCCC-cEEEEEECCCeEEEEeCCCCceEEEEecCC------CccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeee
Q psy17610        302 YHPSE-VQLITCSTNKMIDYWETCDGSIIRSLEGSD------VAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFV  374 (515)
Q Consensus       302 ~~~~~-~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~------~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~  374 (515)
                      +-... .+.++....+.-.+++......+..+....      ...+..+..+|.+.+.+++..|+.|+++|..+++++..
T Consensus       447 ~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~~l~s  526 (577)
T KOG0642|consen  447 RTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKTGKILHS  526 (577)
T ss_pred             eccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceecccccccccchh
Confidence            44333 233333333444445555555444443211      13467788899999999999999999999999999999


Q ss_pred             ccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCC
Q psy17610        375 GIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPE  410 (515)
Q Consensus       375 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~  410 (515)
                      ...|...++++++.|+|.+|++++.|+.+++|.+..
T Consensus       527 ~~a~~~svtslai~~ng~~l~s~s~d~sv~l~kld~  562 (577)
T KOG0642|consen  527 MVAHKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDV  562 (577)
T ss_pred             eeeccceecceeecCCCceEEeecCCceeehhhccc
Confidence            999999999999999999999999999999998854

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.87  E-value=5.9e-18  Score=152.45  Aligned_cols=314  Identities=11%  Similarity=0.100  Sum_probs=206.1

Q ss_pred             CCEEEE-EecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEE
Q psy17610         93 NNKVFV-GTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICAC  171 (515)
Q Consensus        93 ~~~l~~-~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~  171 (515)
                      ++++++ -..+|.|.+.|..+.+.+..+.. ....-..+.|+|||+++++++.|+.|.++|+.+++.+.++.....+ ..
T Consensus         5 ~~l~~V~~~~~~~v~viD~~t~~~~~~i~~-~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~~~-~~   82 (369)
T PF02239_consen    5 GNLFYVVERGSGSVAVIDGATNKVVARIPT-GGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGGNP-RG   82 (369)
T ss_dssp             GGEEEEEEGGGTEEEEEETTT-SEEEEEE--STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SSEE-EE
T ss_pred             ccEEEEEecCCCEEEEEECCCCeEEEEEcC-CCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCCCc-ce
Confidence            345544 44679999999999655555543 3333455789999999999999999999999999999999876654 77


Q ss_pred             EEEeeCCCEEEEEe-CCCeEEEEecCCCceEEEecCC------CCCCeEEEEEcCCCCEEEEe-cCCCcEEEEEccCCce
Q psy17610        172 IVFTYDGKAILSGW-NDGFIRCFTPQSGKLKFIIPNA------HNRGVTALAITQDGTRLLSG-GGEGQVRIWKLTRESQ  243 (515)
Q Consensus       172 ~~~~~~~~~l~~~~-~dg~i~~~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~~~-~~d~~i~iw~~~~~~~  243 (515)
                      +++++||++++++. ..+.+.++|.++.+.+..++..      ....+..+..+|....++.. -+.+.|.+.|......
T Consensus        83 i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~  162 (369)
T PF02239_consen   83 IAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKN  162 (369)
T ss_dssp             EEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSC
T ss_pred             EEEcCCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccc
Confidence            99999999998765 6899999999999998877532      23467888888887755544 4458888888764433


Q ss_pred             eeEEeeccccCceEEEEEecCCCEEEEE-eCCCcEEEEEcccceEEEEEEcCc-----cEEEEEEcCCC----------c
Q psy17610        244 SLQCVLKEHTSSVSVIQIKSDSKEAMSA-STDGTCVLWDLIKSTRLIIMILPS-----MIMSAAYHPSE----------V  307 (515)
Q Consensus       244 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~-----~~~~~~~~~~~----------~  307 (515)
                      ... .............|+|++++++.+ ..+..+-++|..+++....+....     +...+ .+|..          .
T Consensus       163 ~~~-~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~-php~~g~vw~~~~~~~  240 (369)
T PF02239_consen  163 LKV-TTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANF-PHPGFGPVWATSGLGY  240 (369)
T ss_dssp             EEE-EEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEE-EETTTEEEEEEEBSSS
T ss_pred             cce-eeecccccccccccCcccceeeecccccceeEEEeeccceEEEEeeccccccccccccc-cCCCcceEEeeccccc
Confidence            222 233334566788999999988765 456789999999988777664321     22222 22322          2


Q ss_pred             EEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEE----cCCCeEEEEEccCCeeeeeccCCC-CCe
Q psy17610        308 QLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTG----GADQIVKMWMYREGVPCFVGIGHA-ASI  382 (515)
Q Consensus       308 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~----~~dg~i~i~d~~~~~~~~~~~~~~-~~i  382 (515)
                      ..+..-....+.+||....+.++++.... .+ .-+..+|+++++.+.    ...+.|.++|.++.+.+..+.... ..+
T Consensus       241 ~~~~~ig~~~v~v~d~~~wkvv~~I~~~G-~g-lFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~~~~~  318 (369)
T PF02239_consen  241 FAIPLIGTDPVSVHDDYAWKVVKTIPTQG-GG-LFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPGPGKRV  318 (369)
T ss_dssp             SEEEEEE--TTT-STTTBTSEEEEEE-SS-SS---EE--TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHHHT--E
T ss_pred             eecccccCCccccchhhcCeEEEEEECCC-Cc-ceeecCCCCccEEeeccCCCCCceEEEEECcCcceeEEEeccCCCcE
Confidence            22222223345578889999999999865 44 678889999999988    445899999999998777764332 358


Q ss_pred             eEEEECCCCcEEEEEeCC--CcEEEEeCCCCc
Q psy17610        383 TKIKISPDKKVIVSVSAD--GGIFLWTFPELE  412 (515)
Q Consensus       383 ~~~~~~~~~~~l~~~~~d--g~i~iw~~~~~~  412 (515)
                      ..+.|+++|+.+..+..+  +.|.+||..+.+
T Consensus       319 ~h~ef~~dG~~v~vS~~~~~~~i~v~D~~Tl~  350 (369)
T PF02239_consen  319 VHMEFNPDGKEVWVSVWDGNGAIVVYDAKTLK  350 (369)
T ss_dssp             EEEEE-TTSSEEEEEEE--TTEEEEEETTTTE
T ss_pred             eccEECCCCCEEEEEEecCCCEEEEEECCCcE
Confidence            899999999977766554  369999988765

...

>KOG2110|consensus

Probab=99.87  E-value=2.7e-18  Score=143.17  Aligned_cols=238  Identities=16%  Similarity=0.241  Sum_probs=178.7

Q ss_pred             CCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCC--CcEEEEEcccce
Q psy17610        209 NRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTD--GTCVLWDLIKST  286 (515)
Q Consensus       209 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--~~i~iwd~~~~~  286 (515)
                      ...+..+.|+.+...|..|+.|| .++|+...... .. ........|.-+-|+.  .+++..+.+  +.+++.+++...
T Consensus         5 ~~ti~~~~~Nqd~~~lsvGs~~G-yk~~~~~~~~k-~~-~~~~~~~~IvEmLFSS--SLvaiV~~~qpr~Lkv~~~Kk~~   79 (391)
T KOG2110|consen    5 KPTINFIGFNQDSTLLSVGSKDG-YKIFSCSPFEK-CF-SKDTEGVSIVEMLFSS--SLVAIVSIKQPRKLKVVHFKKKT   79 (391)
T ss_pred             CcceeeeeeccceeEEEccCCCc-eeEEecCchHH-hh-cccCCCeEEEEeeccc--ceeEEEecCCCceEEEEEcccCc
Confidence            34567777999998899999887 67888753222 11 1111222344445543  455555544  459999999999


Q ss_pred             EEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecC--CCccEEEEEEcCCCCEEEEEc--CCCeEE
Q psy17610        287 RLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGS--DVAAVNCVDFVDDGKYFLTGG--ADQIVK  362 (515)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~--~dg~i~  362 (515)
                      .+-.+..+.+|.++.++.+  +|++.-.+. |++||+++.+.+.++...  +...+.++++++.+.++|.-+  ..|.|.
T Consensus        80 ~ICe~~fpt~IL~VrmNr~--RLvV~Lee~-IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~  156 (391)
T KOG2110|consen   80 TICEIFFPTSILAVRMNRK--RLVVCLEES-IYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVV  156 (391)
T ss_pred             eEEEEecCCceEEEEEccc--eEEEEEccc-EEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEE
Confidence            9999999999999988754  555555544 999999999999998765  334455556666667888543  468999


Q ss_pred             EEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCc-EEEEeCCCCcCccCCCcccceeeecccccccceeeecCc
Q psy17610        363 MWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGG-IFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILP  441 (515)
Q Consensus       363 i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~-i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  441 (515)
                      +||..+-+++..+..|.+++.+++|+++|.+|||+++.|+ ||++.+..++...+..+..                  .+
T Consensus       157 l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~------------------~~  218 (391)
T KOG2110|consen  157 LFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGT------------------YP  218 (391)
T ss_pred             EEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCc------------------ee
Confidence            9999999999999999999999999999999999999987 7899998765432222221                  12


Q ss_pred             ccEEEeeeccCCcEEEEeecCCeEEEEecCC
Q psy17610        442 SMIMSAAYHPSEVQLITCSTNKMIDYWETCD  472 (515)
Q Consensus       442 ~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~  472 (515)
                      ..|.+++|+|++++|++.+..++|++|.+++
T Consensus       219 ~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~  249 (391)
T KOG2110|consen  219 VSIYSLSFSPDSQFLAASSNTETVHIFKLEK  249 (391)
T ss_pred             eEEEEEEECCCCCeEEEecCCCeEEEEEecc
Confidence            4499999999999999999999999998764

>KOG1310|consensus

Probab=99.87  E-value=2.1e-20  Score=163.42  Aligned_cols=220  Identities=17%  Similarity=0.211  Sum_probs=162.5

Q ss_pred             EEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCC--CCcEEEEEecCCcEEEEe
Q psy17610         75 LYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPV--NFSSVFATCSKNDIRIWS  152 (515)
Q Consensus        75 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~~~~~d~~i~iw~  152 (515)
                      ..+.||.+-|+|++|+.+|.+|++|+.|-.+.|||.-.-+.+..+..||...|.++.|-|  +.+.+++++.|..|+++|
T Consensus        44 ~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfd  123 (758)
T KOG1310|consen   44 AELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFD  123 (758)
T ss_pred             hhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEEe
Confidence            356799999999999999999999999999999999887777888899999999999988  346778888899999999


Q ss_pred             CCCC----------ceeEEEEecCeEEEEEEEeeCC-CEEEEEeCCCeEEEEecCCCce-------EEEec--CCCCCCe
Q psy17610        153 VRTL----------NELLRISVMNMICACIVFTYDG-KAILSGWNDGFIRCFTPQSGKL-------KFIIP--NAHNRGV  212 (515)
Q Consensus       153 ~~~~----------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~~~~~~~~~-------~~~~~--~~~~~~v  212 (515)
                      +...          +....+..|...|..++-.|++ ..+.++++||+|+-+|++....       ...+.  .+.--..
T Consensus       124 l~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~~~liel  203 (758)
T KOG1310|consen  124 LDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYNPQLIEL  203 (758)
T ss_pred             cccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhchhhhee
Confidence            9852          2344456788889999999998 6888999999999999975211       10110  1112346


Q ss_pred             EEEEEcC-CCCEEEEecCCCcEEEEEccCCce------e----------eE-Eeecccc-----------CceEEEEEec
Q psy17610        213 TALAITQ-DGTRLLSGGGEGQVRIWKLTRESQ------S----------LQ-CVLKEHT-----------SSVSVIQIKS  263 (515)
Q Consensus       213 ~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~~------~----------~~-~~~~~~~-----------~~v~~~~~~~  263 (515)
                      .++..+| +..+|++|+.|-..++||.+....      .          ++ .-.++|.           ..++-+.|+|
T Consensus       204 k~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~gn~~~~~~~~t~vtfnp  283 (758)
T KOG1310|consen  204 KCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQGNLDRYITCCTYVTFNP  283 (758)
T ss_pred             eeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCcccccccceeeeEEEEECC
Confidence            7889999 567899999999999999532100      0          01 1111221           1145567788


Q ss_pred             CCCEEEEEeCCCcEEEEEcccceEEEEEEcC
Q psy17610        264 DSKEAMSASTDGTCVLWDLIKSTRLIIMILP  294 (515)
Q Consensus       264 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~  294 (515)
                      +|..++..-....|+++|+..++....+..+
T Consensus       284 NGtElLvs~~gEhVYlfdvn~~~~~~~y~~~  314 (758)
T KOG1310|consen  284 NGTELLVSWGGEHVYLFDVNEDKSPTPYFLP  314 (758)
T ss_pred             CCcEEEEeeCCeEEEEEeecCCCCceeecCc
Confidence            8877766655567888888777666555444

>KOG1523|consensus

Probab=99.86  E-value=7.2e-20  Score=149.47  Aligned_cols=234  Identities=12%  Similarity=0.125  Sum_probs=184.4

Q ss_pred             CCCcEEEEEEecCCCEEEEEecCceEEEEECCCCc--eeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCC-
Q psy17610         80 DDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGF--TLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTL-  156 (515)
Q Consensus        80 ~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~-  156 (515)
                      -..+|+|.||++|+..+|++..+..|.||......  +....+..|...|+.+.|+|..+.|++++.|..-.+|....+ 
T Consensus         9 ~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~   88 (361)
T KOG1523|consen    9 LLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGG   88 (361)
T ss_pred             ccCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCC
Confidence            45799999999999999999999999999987643  456678889999999999999999999999999999998433 


Q ss_pred             --ceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceE---EEecCCCCCCeEEEEEcCCCCEEEEecCCC
Q psy17610        157 --NELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLK---FIIPNAHNRGVTALAITQDGTRLLSGGGEG  231 (515)
Q Consensus       157 --~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~  231 (515)
                        ++...+..++...+++.|+|.++.+++|+....|.+|-.+..+--   ..+..++...|+++.|+|++-+|++|+.|+
T Consensus        89 ~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaGs~D~  168 (361)
T KOG1523|consen   89 TWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGSTDG  168 (361)
T ss_pred             eeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceecccccCc
Confidence              355667778899999999999999999999999999988765432   234467889999999999999999999999


Q ss_pred             cEEEEEcc-----CC-----------ceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceE-EEEE-Ec
Q psy17610        232 QVRIWKLT-----RE-----------SQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTR-LIIM-IL  293 (515)
Q Consensus       232 ~i~iw~~~-----~~-----------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~-~~~~-~~  293 (515)
                      ..++|..-     ..           -+.+...+....+.+..+.|+|+|..|+-.+.|..+.+-|...... .... ..
T Consensus       169 k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~~~v~~~~~~  248 (361)
T KOG1523|consen  169 KCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPSERVQSVATA  248 (361)
T ss_pred             ceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCCceEEeecCCCchhccchhhc
Confidence            99999741     10           0112223334567899999999999999999999999999876642 2222 22


Q ss_pred             CccEEEEEEcCCCcEEEEEE
Q psy17610        294 PSMIMSAAYHPSEVQLITCS  313 (515)
Q Consensus       294 ~~~~~~~~~~~~~~~l~~~~  313 (515)
                      .-+..++.|-.+...+.+|.
T Consensus       249 ~lP~ls~~~ise~~vv~ag~  268 (361)
T KOG1523|consen  249 QLPLLSVSWISENSVVAAGY  268 (361)
T ss_pred             cCCceeeEeecCCceeecCC
Confidence            24566666665554444443

>KOG0290|consensus

Probab=99.86  E-value=9.4e-19  Score=141.03  Aligned_cols=287  Identities=16%  Similarity=0.228  Sum_probs=203.9

Q ss_pred             ceeEEEEecCeEEEEEEEee--C-CCEEEEEeC----CCeEEEEe--cCCCceEEEecCCCCCCeEEEEEcCCC-----C
Q psy17610        157 NELLRISVMNMICACIVFTY--D-GKAILSGWN----DGFIRCFT--PQSGKLKFIIPNAHNRGVTALAITQDG-----T  222 (515)
Q Consensus       157 ~~~~~~~~~~~~v~~~~~~~--~-~~~l~~~~~----dg~i~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~-----~  222 (515)
                      +.+..+.. .-++.++.|+.  + ..+|+.|+.    .+.|.+..  .++++.+..-...|.-+++.+.|.|+.     +
T Consensus        36 ~eiy~Y~a-p~~lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~~pd  114 (364)
T KOG0290|consen   36 KEIYTYNA-PWPLYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDANFDHPYPVTKLMWIPDSKGVYPD  114 (364)
T ss_pred             ceEEEecC-CCceeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCCCceeccCCCCCCCCccceEecCCccccCcc
Confidence            33444432 33567788873  2 346777764    34566554  455666555445799999999999975     3


Q ss_pred             EEEEecCCCcEEEEEccCCcee--eEEe-----eccccCceEEEEEec-CCCEEEEEeCCCcEEEEEcccce----EEEE
Q psy17610        223 RLLSGGGEGQVRIWKLTRESQS--LQCV-----LKEHTSSVSVIQIKS-DSKEAMSASTDGTCVLWDLIKST----RLII  290 (515)
Q Consensus       223 ~l~~~~~d~~i~iw~~~~~~~~--~~~~-----~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~----~~~~  290 (515)
                      +||+.+  ..+++|.+..+...  +...     -..+..++++..|+. +.+++.+.+-|-+..+||++++.    ..+.
T Consensus       115 lLATs~--D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQL  192 (364)
T KOG0290|consen  115 LLATSS--DFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQL  192 (364)
T ss_pred             hhhccc--CeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEE
Confidence            455544  47999998632222  2212     224567889999975 66788999999999999999872    4566


Q ss_pred             EEcCccEEEEEEcCCC-cEEEEEECCCeEEEEeCCCCceEEEEec-CC-CccEEEEEEcC-CCCEEEEEcCC-CeEEEEE
Q psy17610        291 MILPSMIMSAAYHPSE-VQLITCSTNKMIDYWETCDGSIIRSLEG-SD-VAAVNCVDFVD-DGKYFLTGGAD-QIVKMWM  365 (515)
Q Consensus       291 ~~~~~~~~~~~~~~~~-~~l~~~~~~~~i~~~d~~~~~~~~~~~~-~~-~~~i~~~~~~~-~~~~l~~~~~d-g~i~i~d  365 (515)
                      +.+..++..++|...+ +.+++.+.||.+++||++..+...-+.. +. ..+...++|++ |-+++|+-..| ..|.|.|
T Consensus       193 IAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLD  272 (364)
T KOG0290|consen  193 IAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILD  272 (364)
T ss_pred             EecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEE
Confidence            7788899999999865 5778899999999999998765444332 22 36788899988 55677765554 4699999


Q ss_pred             ccC-CeeeeeccCCCCCeeEEEECC-CCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCccc
Q psy17610        366 YRE-GVPCFVGIGHAASITKIKISP-DKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSM  443 (515)
Q Consensus       366 ~~~-~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  443 (515)
                      ++. ..++..+++|.+.|+.++|.| ....|++++.|..+.+||+.....+....               ..........
T Consensus       273 iR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~d---------------Pilay~a~~E  337 (364)
T KOG0290|consen  273 IRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGED---------------PILAYTAGGE  337 (364)
T ss_pred             ecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccccCCCC---------------chhhhhccce
Confidence            986 478899999999999999999 56789999999999999998764311111               1111123456


Q ss_pred             EEEeeeccC-CcEEEEeec
Q psy17610        444 IMSAAYHPS-EVQLITCST  461 (515)
Q Consensus       444 i~~~~~s~~-~~~l~~~~~  461 (515)
                      |+.+.|++. ..+++.+..
T Consensus       338 VNqi~Ws~~~~Dwiai~~~  356 (364)
T KOG0290|consen  338 VNQIQWSSSQPDWIAICFG  356 (364)
T ss_pred             eeeeeecccCCCEEEEEec
Confidence            999999965 557777653

>KOG1007|consensus

Probab=99.86  E-value=1.1e-19  Score=146.26  Aligned_cols=283  Identities=17%  Similarity=0.225  Sum_probs=201.5

Q ss_pred             CCeEEEEecCC--CceEEEecCCCCCCeEEEEEcC-CCCEEEEecCC-------CcEEEEEccCCcee-------eEEee
Q psy17610        187 DGFIRCFTPQS--GKLKFIIPNAHNRGVTALAITQ-DGTRLLSGGGE-------GQVRIWKLTRESQS-------LQCVL  249 (515)
Q Consensus       187 dg~i~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d-------~~i~iw~~~~~~~~-------~~~~~  249 (515)
                      |+.|.+.+++.  ++........|.+.|..++-+| +.+.|+++..+       ..+.||.+..+...       .+..+
T Consensus        39 dNqVhll~~d~e~s~l~skvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~L  118 (370)
T KOG1007|consen   39 DNQVHLLRLDSEGSELLSKVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVASL  118 (370)
T ss_pred             cceeEEEEecCccchhhhhhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhcC
Confidence            56676665544  4444444467888999999999 45555555432       25789998543222       22233


Q ss_pred             c-cccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceE-EEEEEc------CccEEEEEEcC--CCcEEEEEECCCeEE
Q psy17610        250 K-EHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTR-LIIMIL------PSMIMSAAYHP--SEVQLITCSTNKMID  319 (515)
Q Consensus       250 ~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~-~~~~~~------~~~~~~~~~~~--~~~~l~~~~~~~~i~  319 (515)
                      . .+-+.|.++.|.|++..+++.. |..|.+|++..+.. ...+..      ....++-+|+|  +++.+++ ..++++.
T Consensus       119 dteavg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~t-t~d~tl~  196 (370)
T KOG1007|consen  119 DTEAVGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVAT-TSDSTLQ  196 (370)
T ss_pred             CHHHhCceeeEEEcCCCCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEE-eCCCcEE
Confidence            3 4556899999999999988876 77999999987766 333322      23467888988  5565554 5788999


Q ss_pred             EEeCCCCceEEEEecCCCccEEEEEEcCCCC-EEEEEcCCCeEEEEEccC-CeeeeeccCCCCCeeEEEECC-CCcEEEE
Q psy17610        320 YWETCDGSIIRSLEGSDVAAVNCVDFVDDGK-YFLTGGADQIVKMWMYRE-GVPCFVGIGHAASITKIKISP-DKKVIVS  396 (515)
Q Consensus       320 ~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~i~~~~~~~-~~~~l~~  396 (515)
                      .||+++.+....+...+...+..+.|+|+.+ +|++++.||.|++||.+. ..++..+.+|...|.++.|+| ..+++++
T Consensus       197 ~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~~hdqLiLs  276 (370)
T KOG1007|consen  197 FWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNPEHDQLILS  276 (370)
T ss_pred             EEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEEecCccceEEEe
Confidence            9999999999999888878899999999765 578899999999999976 468899999999999999999 4568889


Q ss_pred             EeCCCcEEEEeCCCCcCccCCCcccce---------eeecccccccceeeecCcccEEEeeeccCCcE-EEEeecCCeEE
Q psy17610        397 VSADGGIFLWTFPELEDDVGDSRSLSS---------KISRSTARSTRLIIMILPSMIMSAAYHPSEVQ-LITCSTNKMID  466 (515)
Q Consensus       397 ~~~dg~i~iw~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~-l~~~~~dg~v~  466 (515)
                      ++.|..|.+|.......+.........         ................|...|.+++||.-.++ +|+-+.||++.
T Consensus       277 ~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPWiFASLSYDGRvi  356 (370)
T KOG1007|consen  277 GGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPWIFASLSYDGRVI  356 (370)
T ss_pred             cCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCCCeeEEEeccCceEE
Confidence            999999999987654321111100000         00000111122345568899999999988875 56778999988


Q ss_pred             EEecC
Q psy17610        467 YWETC  471 (515)
Q Consensus       467 iwd~~  471 (515)
                      |=.+.
T Consensus       357 Is~V~  361 (370)
T KOG1007|consen  357 ISSVP  361 (370)
T ss_pred             eecCC
Confidence            76653

>KOG0649|consensus

Probab=99.85  E-value=2.6e-18  Score=134.94  Aligned_cols=272  Identities=15%  Similarity=0.194  Sum_probs=186.9

Q ss_pred             ccCCCCceEEEecCCCCeEEEEcCCCCCCcccccccceEEeeccccccccccccccccccCcceeeeccc-eEEEEEecC
Q psy17610          2 KTTPNDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMGCYGKLIKKKVSTKLKDVNAEDVSLYSAG-VTALYLLKD   80 (515)
Q Consensus         2 ~~~~~~~~~~~g~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~   80 (515)
                      +++|-.+|+++|...|+|.++.++...                     +.+.              ++.+ ...+...+|
T Consensus        17 a~sp~~~~l~agn~~G~iav~sl~sl~---------------------s~sa--------------~~~gk~~iv~eqah   61 (325)
T KOG0649|consen   17 AISPSKQYLFAGNLFGDIAVLSLKSLD---------------------SGSA--------------EPPGKLKIVPEQAH   61 (325)
T ss_pred             hhCCcceEEEEecCCCeEEEEEehhhh---------------------cccc--------------CCCCCcceeecccc
Confidence            478999999999999999999987531                     1110              1111 223344789


Q ss_pred             CCcEEEEEEecCCCEEEEEecCceEEEEECCCCce-------eEEeeccCc-----cCeEEEEeCCCCcEEEEEecCCcE
Q psy17610         81 DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFT-------LTLVNTCHT-----SAIYDLQFPVNFSSVFATCSKNDI  148 (515)
Q Consensus        81 ~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~-------~~~~~~~h~-----~~v~~~~~~~~~~~l~~~~~d~~i  148 (515)
                      +++|..++|.  ..+|++|+ ||.|+-|.+....+       .....+-|.     ..|+++...|....++.++.|+.+
T Consensus        62 dgpiy~~~f~--d~~Lls~g-dG~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~  138 (325)
T KOG0649|consen   62 DGPIYYLAFH--DDFLLSGG-DGLVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVI  138 (325)
T ss_pred             CCCeeeeeee--hhheeecc-CceEEEeeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEE
Confidence            9999999998  55677765 59999998865222       011111232     368899999988888888999999


Q ss_pred             EEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEec--------CCCC-CCeEEEEEcC
Q psy17610        149 RIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIP--------NAHN-RGVTALAITQ  219 (515)
Q Consensus       149 ~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~--------~~~~-~~v~~~~~~~  219 (515)
                      .-||+++|+..+.+++|.+.+.++.--.....+++|++||++++||.++++.+..+.        ++|. ..|-+++.+ 
T Consensus       139 y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~~-  217 (325)
T KOG0649|consen  139 YQVDLEDGRIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAVN-  217 (325)
T ss_pred             EEEEecCCEEEEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEecc-
Confidence            999999999999999999999999985556679999999999999999999887663        1222 225555554 


Q ss_pred             CCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC-ccEE
Q psy17610        220 DGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP-SMIM  298 (515)
Q Consensus       220 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~  298 (515)
                       ..++++|+. ..+.+|.++..+......+++   ++..+.|..  +.+++++..+.+.-|.+. +......... ...+
T Consensus       218 -edWlvCGgG-p~lslwhLrsse~t~vfpipa---~v~~v~F~~--d~vl~~G~g~~v~~~~l~-Gvl~a~ip~~s~~c~  289 (325)
T KOG0649|consen  218 -EDWLVCGGG-PKLSLWHLRSSESTCVFPIPA---RVHLVDFVD--DCVLIGGEGNHVQSYTLN-GVLQANIPVESTACY  289 (325)
T ss_pred             -CceEEecCC-CceeEEeccCCCceEEEeccc---ceeEeeeec--ceEEEeccccceeeeeec-cEEEEeccCCcccee
Confidence             557776655 679999997666655555554   456666643  568888888889888874 3333333222 2344


Q ss_pred             EEEEcCCCc-EEEEEECCCeEEE
Q psy17610        299 SAAYHPSEV-QLITCSTNKMIDY  320 (515)
Q Consensus       299 ~~~~~~~~~-~l~~~~~~~~i~~  320 (515)
                      +..++...- .+-.++....+.+
T Consensus       290 s~s~~~~p~k~~s~ag~s~~~~i  312 (325)
T KOG0649|consen  290 SASWQTSPIKFISIAGFSNKLHI  312 (325)
T ss_pred             eecccCCceEEEEecccceeeee
Confidence            444443332 2333333444444

>KOG1517|consensus

Probab=99.85  E-value=3.9e-19  Score=167.26  Aligned_cols=288  Identities=19%  Similarity=0.289  Sum_probs=216.7

Q ss_pred             CCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeecc--CccCeEEEEeCC--CCcEEEEEecCCcEEEEeCC-
Q psy17610         80 DDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTC--HTSAIYDLQFPV--NFSSVFATCSKNDIRIWSVR-  154 (515)
Q Consensus        80 ~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~--h~~~v~~~~~~~--~~~~l~~~~~d~~i~iw~~~-  154 (515)
                      ...+-..+.|+|-...++++...-.|++||.+.++.+..+..+  ....|+.+.+-.  |...+++++.||.|+||+-- 
T Consensus      1063 n~~~pk~~~~hpf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~ 1142 (1387)
T KOG1517|consen 1063 NNQPPKTLKFHPFEPQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWKDYA 1142 (1387)
T ss_pred             CCCCCceeeecCCCceeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCceEEEecccc
Confidence            3446778899998889999987779999999987665544332  345788888854  45688999999999999743 


Q ss_pred             CC----ceeEEEEecC-------eEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcC-CCC
Q psy17610        155 TL----NELLRISVMN-------MICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQ-DGT  222 (515)
Q Consensus       155 ~~----~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~  222 (515)
                      ++    +.+....+-.       +.=.-+.|.....+|++++.-..|+|||.........++.+....|+++.-+. .|+
T Consensus      1143 ~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn 1222 (1387)
T KOG1517|consen 1143 DKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGN 1222 (1387)
T ss_pred             cccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeEeecccCCCccceeecccccCCc
Confidence            21    2222222111       11133567666677888877889999999999999888878778888887655 579


Q ss_pred             EEEEecCCCcEEEEEccCCce-eeEEeeccccCc--eEEEEEecCCCE-EEEEeCCCcEEEEEcccceEEEEE--Ec---
Q psy17610        223 RLLSGGGEGQVRIWKLTRESQ-SLQCVLKEHTSS--VSVIQIKSDSKE-AMSASTDGTCVLWDLIKSTRLIIM--IL---  293 (515)
Q Consensus       223 ~l~~~~~d~~i~iw~~~~~~~-~~~~~~~~~~~~--v~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~--~~---  293 (515)
                      .+++|..||.|++||.+.... ..+...+.|+..  |..+.+.++|-. +++|+.+|.|++||++.......+  ..   
T Consensus      1223 ~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~ 1302 (1387)
T KOG1517|consen 1223 IIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWE 1302 (1387)
T ss_pred             eEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeeccc
Confidence            999999999999999875432 456677888887  999999887654 999999999999999874322221  11   


Q ss_pred             -CccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEE------ecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEc
Q psy17610        294 -PSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSL------EGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMY  366 (515)
Q Consensus       294 -~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~------~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~  366 (515)
                       .+..+++..++....+++|+. +.|.||++...+ +..+      .+...+.+.|++|+|..-++|+|+.|..|.||..
T Consensus      1303 yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~G~~-l~~~k~n~~F~~q~~gs~scL~FHP~~~llAaG~~Ds~V~iYs~ 1380 (1387)
T KOG1517|consen 1303 YGSALTALTVHEHAPIIASGSA-QLIKIYSLSGEQ-LNIIKYNPGFMGQRIGSVSCLAFHPHRLLLAAGSADSTVSIYSC 1380 (1387)
T ss_pred             cCccceeeeeccCCCeeeecCc-ceEEEEecChhh-hcccccCcccccCcCCCcceeeecchhHhhhhccCCceEEEeec
Confidence             235899999999999999988 999999985433 2222      2334467899999999899999999999999987


Q ss_pred             cCC
Q psy17610        367 REG  369 (515)
Q Consensus       367 ~~~  369 (515)
                      ...
T Consensus      1381 ~k~ 1383 (1387)
T KOG1517|consen 1381 EKP 1383 (1387)
T ss_pred             CCc
Confidence            654

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.85  E-value=1.7e-17  Score=149.48  Aligned_cols=317  Identities=12%  Similarity=0.096  Sum_probs=206.9

Q ss_pred             EEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcC
Q psy17610        140 FATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQ  219 (515)
Q Consensus       140 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  219 (515)
                      ++-..++.|.+.|..+.+.+.++......-..+.|+|||+++++++.||.|.++|+.+++.+.++..  ......+++++
T Consensus        10 V~~~~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~--G~~~~~i~~s~   87 (369)
T PF02239_consen   10 VVERGSGSVAVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKV--GGNPRGIAVSP   87 (369)
T ss_dssp             EEEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE---SSEEEEEEE--
T ss_pred             EEecCCCEEEEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEec--CCCcceEEEcC
Confidence            3445589999999999999999987655545678999999999999999999999999999998853  34468899999


Q ss_pred             CCCEEEEec-CCCcEEEEEccCCceeeEEeecc-------ccCceEEEEEecCCCEEEEEeCC-CcEEEEEcccceE--E
Q psy17610        220 DGTRLLSGG-GEGQVRIWKLTRESQSLQCVLKE-------HTSSVSVIQIKSDSKEAMSASTD-GTCVLWDLIKSTR--L  288 (515)
Q Consensus       220 ~~~~l~~~~-~d~~i~iw~~~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~~d-~~i~iwd~~~~~~--~  288 (515)
                      ||++++++. ..+.+.++|..  +.+.+..++.       ....+..+..+|....++..-.| +.|.+.|....+.  .
T Consensus        88 DG~~~~v~n~~~~~v~v~D~~--tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~  165 (369)
T PF02239_consen   88 DGKYVYVANYEPGTVSVIDAE--TLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLKV  165 (369)
T ss_dssp             TTTEEEEEEEETTEEEEEETT--T--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEEE
T ss_pred             CCCEEEEEecCCCceeEeccc--cccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccce
Confidence            999998775 57899999984  3444444332       23466778788888866666554 7888888766543  3


Q ss_pred             EEEEcCccEEEEEEcCCCcEEEEE-ECCCeEEEEeCCCCceEEEEecC---CCccEEEEEEcCC----------CCEEEE
Q psy17610        289 IIMILPSMIMSAAYHPSEVQLITC-STNKMIDYWETCDGSIIRSLEGS---DVAAVNCVDFVDD----------GKYFLT  354 (515)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~i~~~d~~~~~~~~~~~~~---~~~~i~~~~~~~~----------~~~l~~  354 (515)
                      ..+..........|+|++++++++ .....+.++|..+++....+...   +..+...+ .+|.          +...++
T Consensus       166 ~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~-php~~g~vw~~~~~~~~~~~  244 (369)
T PF02239_consen  166 TTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANF-PHPGFGPVWATSGLGYFAIP  244 (369)
T ss_dssp             EEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEE-EETTTEEEEEEEBSSSSEEE
T ss_pred             eeecccccccccccCcccceeeecccccceeEEEeeccceEEEEeeccccccccccccc-cCCCcceEEeeccccceecc
Confidence            455566678899999999998775 44678999999999887766532   11222222 1221          222212


Q ss_pred             EcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEE----eCCCcEEEEeCCCCcCccCCCcccceeeecccc
Q psy17610        355 GGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSV----SADGGIFLWTFPELEDDVGDSRSLSSKISRSTA  430 (515)
Q Consensus       355 ~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~----~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~  430 (515)
                      .-....+.+||..+.+.+.++.....+ .-+..+|+++++.+.    ...+.|.++|.++.+....              
T Consensus       245 ~ig~~~v~v~d~~~wkvv~~I~~~G~g-lFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~--------------  309 (369)
T PF02239_consen  245 LIGTDPVSVHDDYAWKVVKTIPTQGGG-LFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLKVVKT--------------  309 (369)
T ss_dssp             EEE--TTT-STTTBTSEEEEEE-SSSS---EE--TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE---------------
T ss_pred             cccCCccccchhhcCeEEEEEECCCCc-ceeecCCCCccEEeeccCCCCCceEEEEECcCcceeEE--------------
Confidence            112234567888888888888776666 778899999999988    4458899999877531000              


Q ss_pred             cccceeeecCcccEEEeeeccCCcEEEEee--cCCeEEEEecCCCeeeeeecc
Q psy17610        431 RSTRLIIMILPSMIMSAAYHPSEVQLITCS--TNKMIDYWETCDGSIIRSLEG  481 (515)
Q Consensus       431 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--~dg~v~iwd~~~~~~~~~~~~  481 (515)
                           ........+..+.|+++|+++....  .++.|.+||..+.+.+.++..
T Consensus       310 -----i~~~~~~~~~h~ef~~dG~~v~vS~~~~~~~i~v~D~~Tl~~~~~i~~  357 (369)
T PF02239_consen  310 -----ITPGPGKRVVHMEFNPDGKEVWVSVWDGNGAIVVYDAKTLKEKKRIPV  357 (369)
T ss_dssp             -----HHHHHT--EEEEEE-TTSSEEEEEEE--TTEEEEEETTTTEEEEEEE-
T ss_pred             -----EeccCCCcEeccEECCCCCEEEEEEecCCCEEEEEECCCcEEEEEEEe
Confidence                 0000112388999999999765554  344799999999999888773

...

>KOG1523|consensus

Probab=99.85  E-value=8.7e-19  Score=143.23  Aligned_cols=230  Identities=13%  Similarity=0.129  Sum_probs=184.7

Q ss_pred             EEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCc---eEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEE
Q psy17610        161 RISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGK---LKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWK  237 (515)
Q Consensus       161 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~  237 (515)
                      .+.....+|+|.+|++|+..++++.....+.||......   ...++ ..|...|+.+.|+|..+.|++++.|..-++|.
T Consensus         5 ~~~~~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htl-s~Hd~~vtgvdWap~snrIvtcs~drnayVw~   83 (361)
T KOG1523|consen    5 VFHRLLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTL-SEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWT   83 (361)
T ss_pred             EeeeccCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceeh-hhhCcceeEEeecCCCCceeEccCCCCccccc
Confidence            444456789999999999999999999999999987765   34445 78999999999999999999999999999999


Q ss_pred             c-cCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEE-----EEEEcCccEEEEEEcCCCcEEEE
Q psy17610        238 L-TRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRL-----IIMILPSMIMSAAYHPSEVQLIT  311 (515)
Q Consensus       238 ~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~  311 (515)
                      . ...+.++...+..+....+++.|+|.++.|++++....|.+|-++....-     ......+.|.++.|+|++-++++
T Consensus        84 ~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaa  163 (361)
T KOG1523|consen   84 QPSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAA  163 (361)
T ss_pred             cCCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceecc
Confidence            8 55667777788889999999999999999999999999999988655432     22234467899999999999999


Q ss_pred             EECCCeEEEEeCC------------------CCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCe-ee
Q psy17610        312 CSTNKMIDYWETC------------------DGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGV-PC  372 (515)
Q Consensus       312 ~~~~~~i~~~d~~------------------~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~  372 (515)
                      |+.|+..+++..-                  -|+.+.++. ...+.+..+.|+|+|..|+-.+.|..+.+-|..... .+
T Consensus       164 Gs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~-~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~~~v  242 (361)
T KOG1523|consen  164 GSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEAS-SSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPSERV  242 (361)
T ss_pred             cccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhc-cCCCceeeeEeCCCCCEeeEecCCCceEEeecCCCchhc
Confidence            9999999998631                  122333333 233789999999999999999999999999987654 33


Q ss_pred             eeccCCCCCeeEEEECCCCc
Q psy17610        373 FVGIGHAASITKIKISPDKK  392 (515)
Q Consensus       373 ~~~~~~~~~i~~~~~~~~~~  392 (515)
                      .......-+..++.|-.+..
T Consensus       243 ~~~~~~~lP~ls~~~ise~~  262 (361)
T KOG1523|consen  243 QSVATAQLPLLSVSWISENS  262 (361)
T ss_pred             cchhhccCCceeeEeecCCc
Confidence            33333346777777765443

>KOG0644|consensus

Probab=99.85  E-value=2.4e-21  Score=177.40  Aligned_cols=282  Identities=18%  Similarity=0.252  Sum_probs=222.8

Q ss_pred             eccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCc
Q psy17610        120 NTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGK  199 (515)
Q Consensus       120 ~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~  199 (515)
                      +.+|..+|.|+.|...|.++++++.|..++||..+++.++....+|.+.++.++.+.+...+++++.|..|++|.+..+.
T Consensus       186 LlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~  265 (1113)
T KOG0644|consen  186 LLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGA  265 (1113)
T ss_pred             HHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecCCCc
Confidence            45799999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeE-Eee-ccccCceEEEEEecCCCEEEEEeCCCcE
Q psy17610        200 LKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQ-CVL-KEHTSSVSVIQIKSDSKEAMSASTDGTC  277 (515)
Q Consensus       200 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~-~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i  277 (515)
                      ++..+ .+|++.|++++|+|-.    +.+.||++++||.+-...... ..+ .....-+.++.|...+..+++++.|+.-
T Consensus       266 pvsvL-rghtgavtaiafsP~~----sss~dgt~~~wd~r~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs~d~ea  340 (1113)
T KOG0644|consen  266 PVSVL-RGHTGAVTAIAFSPRA----SSSDDGTCRIWDARLEPRIYVPRPLKFTEKDLVDSILFENNGDRFLTGSRDGEA  340 (1113)
T ss_pred             hHHHH-hccccceeeeccCccc----cCCCCCceEeccccccccccCCCCCCcccccceeeeeccccccccccccCCccc
Confidence            99888 7999999999999954    678999999999861111100 000 1123456677788888899999999998


Q ss_pred             EEEEcccceEEEEEEcCccEEEEEEcCC-CcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCC-CCEEEEE
Q psy17610        278 VLWDLIKSTRLIIMILPSMIMSAAYHPS-EVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDD-GKYFLTG  355 (515)
Q Consensus       278 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~  355 (515)
                      ..|.+.......     ..+.-+..+.+ ..+.+++-.+-.+.+|++.++...+.+.++. ..+..+.++|- .+...++
T Consensus       341 ~n~e~~~l~~~~-----~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~ghs-d~~yvLd~Hpfn~ri~msa  414 (1113)
T KOG0644|consen  341 RNHEFEQLAWRS-----NLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLMGHS-DEVYVLDVHPFNPRIAMSA  414 (1113)
T ss_pred             ccchhhHhhhhc-----cceEEEeccccccccceeeeeeeEeeeeecccchhhhhhcccc-cceeeeeecCCCcHhhhhc
Confidence            888764321100     00001111111 2445566667789999999999988888776 78899999994 4555688


Q ss_pred             cCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCc
Q psy17610        356 GADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELE  412 (515)
Q Consensus       356 ~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  412 (515)
                      +.||...|||+..|.++..+......+..-.||+||..++....-|.+.|......+
T Consensus       415 g~dgst~iwdi~eg~pik~y~~gh~kl~d~kFSqdgts~~lsd~hgql~i~g~gqs~  471 (1113)
T KOG0644|consen  415 GYDGSTIIWDIWEGIPIKHYFIGHGKLVDGKFSQDGTSIALSDDHGQLYILGTGQSK  471 (1113)
T ss_pred             cCCCceEeeecccCCcceeeecccceeeccccCCCCceEecCCCCCceEEeccCCCc
Confidence            999999999999998877654445667788999999999988888999998765443

>KOG1587|consensus

Probab=99.85  E-value=7.4e-19  Score=162.34  Aligned_cols=264  Identities=16%  Similarity=0.213  Sum_probs=193.4

Q ss_pred             CeEEEEecCCC-ceEEEecCCCCCCeEEEEEcC-CCCEEEEecCCCcEEEEEccCCceee----EEeeccccCceEEEEE
Q psy17610        188 GFIRCFTPQSG-KLKFIIPNAHNRGVTALAITQ-DGTRLLSGGGEGQVRIWKLTRESQSL----QCVLKEHTSSVSVIQI  261 (515)
Q Consensus       188 g~i~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~~~~----~~~~~~~~~~v~~~~~  261 (515)
                      +.+.+|+++.. .+...+  .-...|+++.|+| +..+++.|..+|+|.+||++.....+    ......|..++..+.|
T Consensus       222 ~~~~vW~~~~p~~Pe~~~--~~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW  299 (555)
T KOG1587|consen  222 GVLLVWSLKNPNTPELVL--ESPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVW  299 (555)
T ss_pred             ceEEEEecCCCCCceEEE--ecCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEE
Confidence            47899999876 333333  5678899999999 67788899999999999997654422    2223468899999999


Q ss_pred             ecCCC--EEEEEeCCCcEEEEEcccceEEE-------------EEEcCccEEEEEEcCC-CcEEEEEECCCeEEEEeCCC
Q psy17610        262 KSDSK--EAMSASTDGTCVLWDLIKSTRLI-------------IMILPSMIMSAAYHPS-EVQLITCSTNKMIDYWETCD  325 (515)
Q Consensus       262 ~~~~~--~l~~~~~d~~i~iwd~~~~~~~~-------------~~~~~~~~~~~~~~~~-~~~l~~~~~~~~i~~~d~~~  325 (515)
                      ..+..  -+++++.||.|..|+++.-....             .......++++.|.+. ...+++|+..|.|..-+...
T Consensus       300 ~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g  379 (555)
T KOG1587|consen  300 LQNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKG  379 (555)
T ss_pred             eccCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccC
Confidence            76544  49999999999999876433211             1112235888999884 56789999999988733322


Q ss_pred             Cce--------EEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEcc-CCeeeeeccCCCCCeeEEEECCCC-cEEE
Q psy17610        326 GSI--------IRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYR-EGVPCFVGIGHAASITKIKISPDK-KVIV  395 (515)
Q Consensus       326 ~~~--------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~i~~~~~~~~~-~~l~  395 (515)
                      .+.        ...+..+ .+++.++.++|-+..++..+.|.+++||... ...++..+..+...+++++|||-. ..++
T Consensus       380 ~~~~~~~~~~~~~~~~~h-~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~  458 (555)
T KOG1587|consen  380 YTPAPEVSYKGHSTFITH-IGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFA  458 (555)
T ss_pred             Cccccccccccccccccc-CcceEeeecCCCccceeeeeccceeEeccccCCCCcchhhhhccceeeeeEEcCcCceEEE
Confidence            221        1223333 3899999999976655555559999999988 677888888888899999999955 5677


Q ss_pred             EEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCC
Q psy17610        396 SVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCD  472 (515)
Q Consensus       396 ~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~  472 (515)
                      ++..||.+.+||+.............                  .....+.+.|++.|+.|++|+..|.+.+|++..
T Consensus       459 ~~d~~G~l~iWDLl~~~~~Pv~s~~~------------------~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~  517 (555)
T KOG1587|consen  459 TVDGDGNLDIWDLLQDDEEPVLSQKV------------------CSPALTRVRWSPNGKLLAVGDANGTTHILKLSE  517 (555)
T ss_pred             EEcCCCceehhhhhccccCCcccccc------------------cccccceeecCCCCcEEEEecCCCcEEEEEcCc
Confidence            78889999999997654321111111                  123367788999999999999999999999854

>KOG0644|consensus

Probab=99.85  E-value=4.4e-21  Score=175.65  Aligned_cols=279  Identities=15%  Similarity=0.223  Sum_probs=221.4

Q ss_pred             EEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCC
Q psy17610         76 YLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRT  155 (515)
Q Consensus        76 ~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~  155 (515)
                      .+++|...|.|..|...|.++++|+.|..++||..+++. ......||.+.|+.++.+.+...+++++.|..|++|.+.+
T Consensus       185 rLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~-~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~  263 (1113)
T KOG0644|consen  185 RLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETAR-CLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPD  263 (1113)
T ss_pred             HHHhhhhheeeeeeccccceEeecCccceeeeeeccchh-hhccCCCCccccchhccchhhhhhhhcccCceEEEEecCC
Confidence            467899999999999999999999999999999999854 4456788999999999999988889999999999999999


Q ss_pred             CceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecC----CCCCCeEEEEEcCCCCEEEEecCCC
Q psy17610        156 LNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPN----AHNRGVTALAITQDGTRLLSGGGEG  231 (515)
Q Consensus       156 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~d~  231 (515)
                      +.++..+.+|++.|++++|+|-.    +.+.||++++||.+ -......+.    ....-+.++.|...+..+++++.|+
T Consensus       264 ~~pvsvLrghtgavtaiafsP~~----sss~dgt~~~wd~r-~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs~d~  338 (1113)
T KOG0644|consen  264 GAPVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDAR-LEPRIYVPRPLKFTEKDLVDSILFENNGDRFLTGSRDG  338 (1113)
T ss_pred             CchHHHHhccccceeeeccCccc----cCCCCCceEecccc-ccccccCCCCCCcccccceeeeeccccccccccccCCc
Confidence            99999999999999999999954    77889999999987 222221111    1234567778888888999999999


Q ss_pred             cEEEEEccCCceeeEEeeccccCceEEEEEecCC-CEEEEEeCCCcEEEEEcccceEEEEEEcC-ccEEEEEEcCCCcE-
Q psy17610        232 QVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDS-KEAMSASTDGTCVLWDLIKSTRLIIMILP-SMIMSAAYHPSEVQ-  308 (515)
Q Consensus       232 ~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~-  308 (515)
                      .-..|.....        ..+...+.-+..+.+- .+.+++-.+-.+++|++.++......... ..+..+.++|-+.. 
T Consensus       339 ea~n~e~~~l--------~~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~ghsd~~yvLd~Hpfn~ri  410 (1113)
T KOG0644|consen  339 EARNHEFEQL--------AWRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLMGHSDEVYVLDVHPFNPRI  410 (1113)
T ss_pred             ccccchhhHh--------hhhccceEEEeccccccccceeeeeeeEeeeeecccchhhhhhcccccceeeeeecCCCcHh
Confidence            9888876421        1122222222222222 45566667788999999999877666544 47888999996554 


Q ss_pred             EEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCC
Q psy17610        309 LITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREG  369 (515)
Q Consensus       309 l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~  369 (515)
                      ...++.||...|||+-.+.+++.....+ ..+...+||++|..++....-|.++|.....+
T Consensus       411 ~msag~dgst~iwdi~eg~pik~y~~gh-~kl~d~kFSqdgts~~lsd~hgql~i~g~gqs  470 (1113)
T KOG0644|consen  411 AMSAGYDGSTIIWDIWEGIPIKHYFIGH-GKLVDGKFSQDGTSIALSDDHGQLYILGTGQS  470 (1113)
T ss_pred             hhhccCCCceEeeecccCCcceeeeccc-ceeeccccCCCCceEecCCCCCceEEeccCCC
Confidence            4578899999999999999988887666 77788899999999999888899999876544

>KOG1517|consensus

Probab=99.84  E-value=1e-18  Score=164.46  Aligned_cols=297  Identities=19%  Similarity=0.249  Sum_probs=208.7

Q ss_pred             EEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCC--CCCCeEEEEEcC--CCCEEEEecCCCcEEEEEccCCce
Q psy17610        168 ICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNA--HNRGVTALAITQ--DGTRLLSGGGEGQVRIWKLTRESQ  243 (515)
Q Consensus       168 ~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~--~~~~l~~~~~d~~i~iw~~~~~~~  243 (515)
                      +...+.|+|-...++++...-.|++||.+.++....+..+  ....|+.+.+-.  |..++++|+.||.|+||+--....
T Consensus      1066 ~pk~~~~hpf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~~ 1145 (1387)
T KOG1517|consen 1066 PPKTLKFHPFEPQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWKDYADKW 1145 (1387)
T ss_pred             CCceeeecCCCceeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCceEEEeccccccc
Confidence            3456788888889999988889999999999887766322  345688888865  556889999999999997522110


Q ss_pred             eeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeC
Q psy17610        244 SLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWET  323 (515)
Q Consensus       244 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~  323 (515)
                      .       ...-|+  +|.+=...+.....-|.+                      +.|.....+|++++.-..|++||.
T Consensus      1146 ~-------~~eLVT--aw~~Ls~~~~~~r~~~~v----------------------~dWqQ~~G~Ll~tGd~r~IRIWDa 1194 (1387)
T KOG1517|consen 1146 K-------KPELVT--AWSSLSDQLPGARGTGLV----------------------VDWQQQSGHLLVTGDVRSIRIWDA 1194 (1387)
T ss_pred             C-------CceeEE--eeccccccCccCCCCCee----------------------eehhhhCCeEEecCCeeEEEEEec
Confidence            0       000111  122211111111111222                      234445556666666788889998


Q ss_pred             CCCceEEEEecCCCccEEEEEEcC-CCCEEEEEcCCCeEEEEEccCC---eeeeeccCCCCC--eeEEEECCCCcE-EEE
Q psy17610        324 CDGSIIRSLEGSDVAAVNCVDFVD-DGKYFLTGGADQIVKMWMYREG---VPCFVGIGHAAS--ITKIKISPDKKV-IVS  396 (515)
Q Consensus       324 ~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~~--i~~~~~~~~~~~-l~~  396 (515)
                      ........+.......++++.-+. .|+.+++|..||.|++||.+..   ..+...+.|+..  |..+.+.+.|-. |++
T Consensus      1195 ~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvS 1274 (1387)
T KOG1517|consen 1195 HKEQVVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVS 1274 (1387)
T ss_pred             ccceeEeecccCCCccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceee
Confidence            888888877766656777765543 5799999999999999998764   356777889887  999999986654 999


Q ss_pred             EeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeee
Q psy17610        397 VSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSII  476 (515)
Q Consensus       397 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~  476 (515)
                      |+.||.|++||++....+.  ....             .......+..+++..+++.+.+|+|+. +.|+||++. |+.+
T Consensus      1275 gs~~G~I~~~DlR~~~~e~--~~~i-------------v~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~-G~~l 1337 (1387)
T KOG1517|consen 1275 GSQDGDIQLLDLRMSSKET--FLTI-------------VAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLS-GEQL 1337 (1387)
T ss_pred             eccCCeEEEEecccCcccc--ccee-------------eeccccCccceeeeeccCCCeeeecCc-ceEEEEecC-hhhh
Confidence            9999999999998742110  0000             000011224889999999999999998 999999974 5554


Q ss_pred             eeec------ccccceEEEEEEcCCCcEEEEeecCCeEEEEE
Q psy17610        477 RSLE------GSDVAAVNCVDFVDDGKYFLTGGADQIVKICL  512 (515)
Q Consensus       477 ~~~~------~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~  512 (515)
                      ..+.      +.....+.|++|+|---+||+|+.|.+|.||.
T Consensus      1338 ~~~k~n~~F~~q~~gs~scL~FHP~~~llAaG~~Ds~V~iYs 1379 (1387)
T KOG1517|consen 1338 NIIKYNPGFMGQRIGSVSCLAFHPHRLLLAAGSADSTVSIYS 1379 (1387)
T ss_pred             cccccCcccccCcCCCcceeeecchhHhhhhccCCceEEEee
Confidence            4443      33346789999999999999999999999985

>KOG0771|consensus

Probab=99.84  E-value=1.1e-18  Score=148.20  Aligned_cols=199  Identities=18%  Similarity=0.214  Sum_probs=157.3

Q ss_pred             EEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccC
Q psy17610        298 MSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIG  377 (515)
Q Consensus       298 ~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~  377 (515)
                      ..+++++++..+++++.||.+|+|+..+...+.....++ ..|.++.|+|||++|++-+.| ..+||+.+++..+....+
T Consensus       148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~-~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~  225 (398)
T KOG0771|consen  148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHH-AEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTP  225 (398)
T ss_pred             eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhc-CccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCC
Confidence            789999999999999999999999988888777777777 899999999999999999999 899999999976665542


Q ss_pred             --CCCCeeEEEECCCC-----cEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeec
Q psy17610        378 --HAASITKIKISPDK-----KVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYH  450 (515)
Q Consensus       378 --~~~~i~~~~~~~~~-----~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s  450 (515)
                        .......+.|+.|+     ..++....-+.|+.|++...... . ......             .......|++++.|
T Consensus       226 ~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~-~-~l~~~~-------------~~~~~~siSsl~VS  290 (398)
T KOG0771|consen  226 FSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGS-N-FLRLRK-------------KIKRFKSISSLAVS  290 (398)
T ss_pred             cccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccc-c-ccchhh-------------hhhccCcceeEEEc
Confidence              23456677888776     33333444567888877654321 0 000000             01112349999999


Q ss_pred             cCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEEEEEE
Q psy17610        451 PSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLY  513 (515)
Q Consensus       451 ~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~  513 (515)
                      ++|+++|.|+.||.|-|++..+-+.++-.+..|...|+.+.|+||.+++++.+.|...+|..+
T Consensus       291 ~dGkf~AlGT~dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l  353 (398)
T KOG0771|consen  291 DDGKFLALGTMDGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKL  353 (398)
T ss_pred             CCCcEEEEeccCCcEEEEEeceeeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEE
Confidence            999999999999999999999999888887766689999999999999999999988877643

>KOG1587|consensus

Probab=99.84  E-value=1.1e-18  Score=161.10  Aligned_cols=264  Identities=16%  Similarity=0.211  Sum_probs=195.4

Q ss_pred             ceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEE-ecCCcEEEEeCCCCce--eEE----EEecCeEEEEEEEe
Q psy17610        103 CEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFAT-CSKNDIRIWSVRTLNE--LLR----ISVMNMICACIVFT  175 (515)
Q Consensus       103 ~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~-~~d~~i~iw~~~~~~~--~~~----~~~~~~~v~~~~~~  175 (515)
                      +.+.+|+++........+. ...+|+++.|+|....++++ +.+|.|.+||+..+..  ...    ...|..++..+.|.
T Consensus       222 ~~~~vW~~~~p~~Pe~~~~-~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~  300 (555)
T KOG1587|consen  222 GVLLVWSLKNPNTPELVLE-SPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWL  300 (555)
T ss_pred             ceEEEEecCCCCCceEEEe-cCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEe
Confidence            4799999998655666655 67789999999976555555 5599999999987765  222    23678899999997


Q ss_pred             eCCCE--EEEEeCCCeEEEEecCCCceEEE-ec---C-------CCCCCeEEEEEcC-CCCEEEEecCCCcEEEEEccCC
Q psy17610        176 YDGKA--ILSGWNDGFIRCFTPQSGKLKFI-IP---N-------AHNRGVTALAITQ-DGTRLLSGGGEGQVRIWKLTRE  241 (515)
Q Consensus       176 ~~~~~--l~~~~~dg~i~~~~~~~~~~~~~-~~---~-------~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~  241 (515)
                      .+..-  +++++.||.|..|+++.-..... ..   .       .....+++++|.+ +...+++|+++|.|.--+....
T Consensus       301 ~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~  380 (555)
T KOG1587|consen  301 QNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGY  380 (555)
T ss_pred             ccCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCC
Confidence            75544  99999999999998765332110 00   0       2234588999988 6678999999998887443222


Q ss_pred             cee------eEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcc-cceEEEEEEcC-ccEEEEEEcCCC-cEEEEE
Q psy17610        242 SQS------LQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLI-KSTRLIIMILP-SMIMSAAYHPSE-VQLITC  312 (515)
Q Consensus       242 ~~~------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~-~~~~~~~~~~~-~~~~~~~~~~~~-~~l~~~  312 (515)
                      ...      ....+..|.++|..+.++|-+..++..+.|.++++|... ...++..+... ..+.+++|+|.. ..++++
T Consensus       381 ~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~~  460 (555)
T KOG1587|consen  381 TPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFATV  460 (555)
T ss_pred             cccccccccccccccccCcceEeeecCCCccceeeeeccceeEeccccCCCCcchhhhhccceeeeeEEcCcCceEEEEE
Confidence            222      244566788999999999987777766669999999977 55555554443 459999999976 456677


Q ss_pred             ECCCeEEEEeCCCC--ceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccC
Q psy17610        313 STNKMIDYWETCDG--SIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYRE  368 (515)
Q Consensus       313 ~~~~~i~~~d~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~  368 (515)
                      ..+|.+.+||+...  .++.+.... ....+.+.|+++|+.|++|...|.+.+|++..
T Consensus       461 d~~G~l~iWDLl~~~~~Pv~s~~~~-~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~  517 (555)
T KOG1587|consen  461 DGDGNLDIWDLLQDDEEPVLSQKVC-SPALTRVRWSPNGKLLAVGDANGTTHILKLSE  517 (555)
T ss_pred             cCCCceehhhhhccccCCccccccc-ccccceeecCCCCcEEEEecCCCcEEEEEcCc
Confidence            77999999998654  344444444 36677888999999999999999999999964

>KOG0771|consensus

Probab=99.84  E-value=7.2e-19  Score=149.28  Aligned_cols=194  Identities=20%  Similarity=0.269  Sum_probs=152.8

Q ss_pred             EEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEE
Q psy17610        213 TALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMI  292 (515)
Q Consensus       213 ~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~  292 (515)
                      ..++|+++|..+++++.||.+|+|+.  +..........|...|.++.|+||++.|++.+.| ..++|+.+++..+....
T Consensus       148 k~vaf~~~gs~latgg~dg~lRv~~~--Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t  224 (398)
T KOG0771|consen  148 KVVAFNGDGSKLATGGTDGTLRVWEW--PSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKT  224 (398)
T ss_pred             eEEEEcCCCCEeeeccccceEEEEec--CcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcC
Confidence            78999999999999999999999997  3444555667899999999999999999999999 89999999996665544


Q ss_pred             c---CccEEEEEEcCCC---cEEE--EEECCCeEEEEeCCCCce-----EEEEecCCCccEEEEEEcCCCCEEEEEcCCC
Q psy17610        293 L---PSMIMSAAYHPSE---VQLI--TCSTNKMIDYWETCDGSI-----IRSLEGSDVAAVNCVDFVDDGKYFLTGGADQ  359 (515)
Q Consensus       293 ~---~~~~~~~~~~~~~---~~l~--~~~~~~~i~~~d~~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg  359 (515)
                      .   +.....+.|..++   .+.+  .....+.++.||+...+.     .++... ....|++++.+++|++++.|+.||
T Consensus       225 ~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~-~~~siSsl~VS~dGkf~AlGT~dG  303 (398)
T KOG0771|consen  225 PFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIK-RFKSISSLAVSDDGKFLALGTMDG  303 (398)
T ss_pred             CcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhh-ccCcceeEEEcCCCcEEEEeccCC
Confidence            2   2346677777766   3333  333455677666544322     111111 125899999999999999999999


Q ss_pred             eEEEEEccCCeeeee-ccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCC
Q psy17610        360 IVKMWMYREGVPCFV-GIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPE  410 (515)
Q Consensus       360 ~i~i~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~  410 (515)
                      .|.|++..+.+.+.. -+.|...|+.+.|+||.+++++.+.|....+..+..
T Consensus       304 sVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~v  355 (398)
T KOG0771|consen  304 SVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLAV  355 (398)
T ss_pred             cEEEEEeceeeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEee
Confidence            999999988776654 357999999999999999999999999999887764

>KOG2139|consensus

Probab=99.83  E-value=6.2e-18  Score=140.57  Aligned_cols=304  Identities=14%  Similarity=0.164  Sum_probs=199.7

Q ss_pred             CCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCce--
Q psy17610         81 DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNE--  158 (515)
Q Consensus        81 ~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~--  158 (515)
                      +-.+.-++|++.-.-+|++..|-.|++|+-+. .....+....+..|++++|-|.+..-++.+-.+-|++|.....-.  
T Consensus        98 ~~dlr~~aWhqH~~~fava~nddvVriy~kss-t~pt~Lks~sQrnvtclawRPlsaselavgCr~gIciW~~s~tln~~  176 (445)
T KOG2139|consen   98 EIDLRGVAWHQHIIAFAVATNDDVVRIYDKSS-TCPTKLKSVSQRNVTCLAWRPLSASELAVGCRAGICIWSDSRTLNAN  176 (445)
T ss_pred             hcceeeEeechhhhhhhhhccCcEEEEeccCC-CCCceecchhhcceeEEEeccCCcceeeeeecceeEEEEcCcccccc
Confidence            35677899999777789999999999999887 455555555677899999999765555555556799998753111  


Q ss_pred             ------------eEEEEecCeEEEEEEEeeCCCEEEEEeC-CCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEE
Q psy17610        159 ------------LLRISVMNMICACIVFTYDGKAILSGWN-DGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLL  225 (515)
Q Consensus       159 ------------~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  225 (515)
                                  +.+..+| .+|+++.|.+||..+++++. +..|.+||++++..+... ....+.++-+.|+||+.+|+
T Consensus       177 r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~-~~glgg~slLkwSPdgd~lf  254 (445)
T KOG2139|consen  177 RNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLI-PKGLGGFSLLKWSPDGDVLF  254 (445)
T ss_pred             cccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCccccc-ccCCCceeeEEEcCCCCEEE
Confidence                        1112233 68999999999999998875 578999999999887665 34556789999999999999


Q ss_pred             EecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCC
Q psy17610        226 SGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPS  305 (515)
Q Consensus       226 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  305 (515)
                      .+.-|+..++|+..+. .....- .-..+.|...+|+|+|..|+.+... .-++|.+.                  |...
T Consensus       255 aAt~davfrlw~e~q~-wt~erw-~lgsgrvqtacWspcGsfLLf~~sg-sp~lysl~------------------f~~~  313 (445)
T KOG2139|consen  255 AATCDAVFRLWQENQS-WTKERW-ILGSGRVQTACWSPCGSFLLFACSG-SPRLYSLT------------------FDGE  313 (445)
T ss_pred             Eecccceeeeehhccc-ceecce-eccCCceeeeeecCCCCEEEEEEcC-CceEEEEe------------------ecCC
Confidence            9999999999976432 222222 2234589999999999988766542 33444432                  2111


Q ss_pred             CcEEE-EEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCC--------eEEEEEccCCeeeeec-
Q psy17610        306 EVQLI-TCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQ--------IVKMWMYREGVPCFVG-  375 (515)
Q Consensus       306 ~~~l~-~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--------~i~i~d~~~~~~~~~~-  375 (515)
                      ...+. .++......+-|+..-..... +.--.+++.+++|.|.|.+||+.-..+        .|.+||.+..-.+... 
T Consensus       314 ~~~~~~~~~~k~~lliaDL~e~ti~ag-~~l~cgeaq~lawDpsGeyLav~fKg~~~v~~~k~~i~~fdtr~sp~vels~  392 (445)
T KOG2139|consen  314 DSVFLRPQSIKRVLLIADLQEVTICAG-QRLCCGEAQCLAWDPSGEYLAVIFKGQSFVLLCKLHISRFDTRKSPPVELSY  392 (445)
T ss_pred             CccccCcccceeeeeeccchhhhhhcC-cccccCccceeeECCCCCEEEEEEcCCchhhhhhhhhhhhcccccCceEEEe
Confidence            11111 111122223333322111111 001126788999999999999876543        4667777654322211 


Q ss_pred             --cCCCCCeeEEEECC---CCcEEEEEeCCCcEEEEeCC
Q psy17610        376 --IGHAASITKIKISP---DKKVIVSVSADGGIFLWTFP  409 (515)
Q Consensus       376 --~~~~~~i~~~~~~~---~~~~l~~~~~dg~i~iw~~~  409 (515)
                        .........+.|+|   ++.+|..+=..|.+.-|++.
T Consensus       393 cg~i~ge~P~~IsF~pl~n~g~lLsiaWsTGriq~ypl~  431 (445)
T KOG2139|consen  393 CGMIGGEYPAYISFGPLKNEGRLLSIAWSTGRIQRYPLT  431 (445)
T ss_pred             cccccCCCCceEEeeecccCCcEEEEEeccCceEeeeeE
Confidence              01112245567776   67778777778888888764

>KOG0303|consensus

Probab=99.83  E-value=5.7e-19  Score=148.26  Aligned_cols=206  Identities=17%  Similarity=0.275  Sum_probs=171.0

Q ss_pred             CCCCCCeEEEEEcC-CCCEEEEecCCCcEEEEEccCCc-----eeeEEeeccccCceEEEEEecC-CCEEEEEeCCCcEE
Q psy17610        206 NAHNRGVTALAITQ-DGTRLLSGGGEGQVRIWKLTRES-----QSLQCVLKEHTSSVSVIQIKSD-SKEAMSASTDGTCV  278 (515)
Q Consensus       206 ~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~-----~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~  278 (515)
                      .+|.++|..++|+| +...||+|++|.+|.||++..+.     ..+...+.+|...|--++|+|. .+.|++++.|.+|.
T Consensus        78 ~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~  157 (472)
T KOG0303|consen   78 CGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVS  157 (472)
T ss_pred             cCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceEE
Confidence            68999999999999 67789999999999999985332     2456678999999999999996 45788999999999


Q ss_pred             EEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEc--
Q psy17610        279 LWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGG--  356 (515)
Q Consensus       279 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--  356 (515)
                      +|++.+++.+..+.++..+.++.|+.+|.++++.+.|..|++||.++++.+..-..|.........|-.+|.++.+|.  
T Consensus       158 iWnv~tgeali~l~hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG~k~~Raifl~~g~i~tTGfsr  237 (472)
T KOG0303|consen  158 IWNVGTGEALITLDHPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGAKPARAIFLASGKIFTTGFSR  237 (472)
T ss_pred             EEeccCCceeeecCCCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccCCCcceeEEeccCceeeecccc
Confidence            999999999999999999999999999999999999999999999999999988777666667778888898665553  


Q ss_pred             -CCCeEEEEEccCCee---eeeccCCCCCeeEEEECCCCcEEEEEe-CCCcEEEEeCCCCc
Q psy17610        357 -ADQIVKMWMYREGVP---CFVGIGHAASITKIKISPDKKVIVSVS-ADGGIFLWTFPELE  412 (515)
Q Consensus       357 -~dg~i~i~d~~~~~~---~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~~  412 (515)
                       .+.++.+||..+-+.   ...+ ..+..|.---|.+|.+.+..++ .|+.|+-|.+....
T Consensus       238 ~seRq~aLwdp~nl~eP~~~~el-DtSnGvl~PFyD~dt~ivYl~GKGD~~IRYyEit~d~  297 (472)
T KOG0303|consen  238 MSERQIALWDPNNLEEPIALQEL-DTSNGVLLPFYDPDTSIVYLCGKGDSSIRYFEITNEP  297 (472)
T ss_pred             ccccceeccCcccccCcceeEEe-ccCCceEEeeecCCCCEEEEEecCCcceEEEEecCCC
Confidence             367899998765432   2233 3345566667888888877665 59999999987654

>KOG1240|consensus

Probab=99.83  E-value=5.8e-18  Score=161.95  Aligned_cols=353  Identities=19%  Similarity=0.207  Sum_probs=222.1

Q ss_pred             EECCCCceeEEeeccCccCeEEEEeCCCC-cEEEEEecCCcEEEEeCCCC-------ceeEEEEecCeEEEEEEEeeCCC
Q psy17610        108 IDMNSGFTLTLVNTCHTSAIYDLQFPVNF-SSVFATCSKNDIRIWSVRTL-------NELLRISVMNMICACIVFTYDGK  179 (515)
Q Consensus       108 w~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~~~~~d~~i~iw~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~  179 (515)
                      |+.+.  .+...+..|...|..++.+++. .++++++.||+|++||...-       +...++......+.++.+.+.++
T Consensus      1034 W~p~G--~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~ 1111 (1431)
T KOG1240|consen 1034 WNPRG--ILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGD 1111 (1431)
T ss_pred             CCccc--eEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCC
Confidence            66554  4445556699999999987765 89999999999999998642       22334445667889999999999


Q ss_pred             EEEEEeCCCeEEEEecCCCceE------EEecCCC-CCCeE-EEEEcC-CCC-EEEEecCCCcEEEEEccCCceeeEEee
Q psy17610        180 AILSGWNDGFIRCFTPQSGKLK------FIIPNAH-NRGVT-ALAITQ-DGT-RLLSGGGEGQVRIWKLTRESQSLQCVL  249 (515)
Q Consensus       180 ~l~~~~~dg~i~~~~~~~~~~~------~~~~~~~-~~~v~-~~~~~~-~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~  249 (515)
                      .+|+++.||.|++.+++..+..      ...+..+ .+.+. .-+|.. .+. .++.+...+.|..||++..........
T Consensus      1112 ~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~ 1191 (1431)
T KOG1240|consen 1112 QFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKN 1191 (1431)
T ss_pred             eEEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhc
Confidence            9999999999999988762111      1111222 23333 334433 233 778888889999999975444333344


Q ss_pred             ccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCc--cEEEEEEcCC---CcEEEEEE--CCCeEEEEe
Q psy17610        250 KEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPS--MIMSAAYHPS---EVQLITCS--TNKMIDYWE  322 (515)
Q Consensus       250 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~---~~~l~~~~--~~~~i~~~d  322 (515)
                      ....+.|++++.+|.+++++.|...|.+.+||++-+.++....++.  ++..+..+|-   ....++++  ..+.+.+|+
T Consensus      1192 ~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn 1271 (1431)
T KOG1240|consen 1192 QLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWN 1271 (1431)
T ss_pred             CccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeee
Confidence            4456789999999999999999999999999999988888877664  5777776663   34444443  478899999


Q ss_pred             CCCCceEEEEecCCC------------------ccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeee-eeccCCCCCee
Q psy17610        323 TCDGSIIRSLEGSDV------------------AAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPC-FVGIGHAASIT  383 (515)
Q Consensus       323 ~~~~~~~~~~~~~~~------------------~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~~i~  383 (515)
                      +.+|.....+.....                  -......+...+.++.+|+.|..|+.||....+.. ....+......
T Consensus      1272 ~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p~~ss~~~~~~s~~~~ 1351 (1431)
T KOG1240|consen 1272 METGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRPEISSYAVPGPSTSYS 1351 (1431)
T ss_pred             cccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCCcccccccccCcccccc
Confidence            999877666654310                  11112233334568889999999999998765433 22222222222


Q ss_pred             EEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCC-cEEEEeecC
Q psy17610        384 KIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSE-VQLITCSTN  462 (515)
Q Consensus       384 ~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~d  462 (515)
                      ....+.+ ..++.++.  .+...-..  +..........  ...............|...|+++++-... .+|++++.|
T Consensus      1352 ~~~~s~~-~~~i~~~~--~i~e~i~~--~~tv~~t~~~~--~~~~~~~~~~~ps~~H~d~Itdma~~~~~q~llvs~s~d 1424 (1431)
T KOG1240|consen 1352 TNSESYD-LSTIPGSQ--FIDEFIIY--QQTVGLTEALR--ENQKLRPGPSDPSTYHHDPITDMATLKSEQPLLVSSSRD 1424 (1431)
T ss_pred             ccchhcc-ccccCCCc--cchhhhhh--hhhcCchhhcc--cccccccCCCCCcccccchhhhhhhhccCccEEEEecCC
Confidence            2222221 11222221  11110000  00000000000  00001112222334567788888876554 588999999


Q ss_pred             CeEEEEe
Q psy17610        463 KMIDYWE  469 (515)
Q Consensus       463 g~v~iwd  469 (515)
                      |.|++|.
T Consensus      1425 G~IkiWk 1431 (1431)
T KOG1240|consen 1425 GVIKIWK 1431 (1431)
T ss_pred             CeeeecC
Confidence            9999994

>KOG1240|consensus

Probab=99.83  E-value=3.1e-18  Score=163.76  Aligned_cols=261  Identities=13%  Similarity=0.154  Sum_probs=189.6

Q ss_pred             EeCCCCceeEEEEecCeEEEEEEEeeCC-CEEEEEeCCCeEEEEecCCC-------ceEEEecCCCCCCeEEEEEcCCCC
Q psy17610        151 WSVRTLNELLRISVMNMICACIVFTYDG-KAILSGWNDGFIRCFTPQSG-------KLKFIIPNAHNRGVTALAITQDGT  222 (515)
Q Consensus       151 w~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~~~~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~  222 (515)
                      |+. .|..+..+..|...+..++.+++. .++++|+.||+|++|+...-       +...++ ......+.++...+.++
T Consensus      1034 W~p-~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~lty-s~~~sr~~~vt~~~~~~ 1111 (1431)
T KOG1240|consen 1034 WNP-RGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTY-SPEGSRVEKVTMCGNGD 1111 (1431)
T ss_pred             CCc-cceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEE-eccCCceEEEEeccCCC
Confidence            665 367888888899888888887765 89999999999999997642       122222 23567899999999999


Q ss_pred             EEEEecCCCcEEEEEccCCceee-----EEeeccc-cCce-EEEEEec-CCC-EEEEEeCCCcEEEEEcccceEEEEEEc
Q psy17610        223 RLLSGGGEGQVRIWKLTRESQSL-----QCVLKEH-TSSV-SVIQIKS-DSK-EAMSASTDGTCVLWDLIKSTRLIIMIL  293 (515)
Q Consensus       223 ~l~~~~~d~~i~iw~~~~~~~~~-----~~~~~~~-~~~v-~~~~~~~-~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~  293 (515)
                      .+|+++.||.|++.+++......     ......+ .+.+ ..-++.. .+. .++.+..-+.|..||++..........
T Consensus      1112 ~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~ 1191 (1431)
T KOG1240|consen 1112 QFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKN 1191 (1431)
T ss_pred             eEEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhc
Confidence            99999999999999986421111     1111111 2222 2233322 233 677788889999999988766555543


Q ss_pred             ---CccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCC---CCEEEEEc--CCCeEEEEE
Q psy17610        294 ---PSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDD---GKYFLTGG--ADQIVKMWM  365 (515)
Q Consensus       294 ---~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~l~~~~--~dg~i~i~d  365 (515)
                         ++.+++++.+|.+.+++.|+..|.+.+||++-+.++..+..+...+++.+..+|-   ....++++  ..+.|.+|+
T Consensus      1192 ~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn 1271 (1431)
T KOG1240|consen 1192 QLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWN 1271 (1431)
T ss_pred             CccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeee
Confidence               4579999999999999999999999999999999999998877788888888773   24455444  467899999


Q ss_pred             ccCCeeeeeccCC-------------------CCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcC
Q psy17610        366 YREGVPCFVGIGH-------------------AASITKIKISPDKKVIVSVSADGGIFLWTFPELED  413 (515)
Q Consensus       366 ~~~~~~~~~~~~~-------------------~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~  413 (515)
                      +.+|.....+...                   .-......+...+..+.+|+.|..|+.||....+.
T Consensus      1272 ~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p~~ 1338 (1431)
T KOG1240|consen 1272 METGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRPEI 1338 (1431)
T ss_pred             cccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCCccc
Confidence            9988655544322                   11122233444566899999999999999887653

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.82  E-value=3.4e-18  Score=159.74  Aligned_cols=236  Identities=13%  Similarity=0.094  Sum_probs=168.5

Q ss_pred             CCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCC---CeEEEEecCCCceEEEecCCCCCCeEEEEEcCCC
Q psy17610        145 KNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWND---GFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDG  221 (515)
Q Consensus       145 d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  221 (515)
                      +..|.+||.+... .+.+..+...+....|+|||+.|+..+.+   ..|++||+.+++.....  ........++|+|||
T Consensus       183 ~~~i~i~d~dg~~-~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~--~~~g~~~~~~wSPDG  259 (429)
T PRK01742        183 PYEVRVADYDGFN-QFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVA--SFRGHNGAPAFSPDG  259 (429)
T ss_pred             eEEEEEECCCCCC-ceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEe--cCCCccCceeECCCC
Confidence            3689999986544 56677778889999999999999987653   46999999988653322  122233468999999


Q ss_pred             CEEEEec-CCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEe-CCCcEEEEEcccc-eEEEEEEcCccEE
Q psy17610        222 TRLLSGG-GEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAS-TDGTCVLWDLIKS-TRLIIMILPSMIM  298 (515)
Q Consensus       222 ~~l~~~~-~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~-~~~~~~~~~~~~~  298 (515)
                      +.|+.+. .+|.+.||.++..... ...+..+...+....|+|||+.++.++ .++...+|++... .....+... . .
T Consensus       260 ~~La~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l~~~-~-~  336 (429)
T PRK01742        260 SRLAFASSKDGVLNIYVMGANGGT-PSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLVGGR-G-Y  336 (429)
T ss_pred             CEEEEEEecCCcEEEEEEECCCCC-eEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEecCC-C-C
Confidence            9888764 6787776654322222 234455666788899999999877665 5678888876532 122222222 2 4


Q ss_pred             EEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEcc--CCeeeeecc
Q psy17610        299 SAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYR--EGVPCFVGI  376 (515)
Q Consensus       299 ~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~--~~~~~~~~~  376 (515)
                      ...|+|+++.++..+.++ +..||+.+++........   ....+.|+|||++|+.++.++...+|++.  ++.....+.
T Consensus       337 ~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~~~lt~~~---~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~G~~~~~l~  412 (429)
T PRK01742        337 SAQISADGKTLVMINGDN-VVKQDLTSGSTEVLSSTF---LDESPSISPNGIMIIYSSTQGLGKVLQLVSADGRFKARLP  412 (429)
T ss_pred             CccCCCCCCEEEEEcCCC-EEEEECCCCCeEEecCCC---CCCCceECCCCCEEEEEEcCCCceEEEEEECCCCceEEcc
Confidence            578999999998887755 556999888754322221   23467899999999999999988887753  577788888


Q ss_pred             CCCCCeeEEEECCC
Q psy17610        377 GHAASITKIKISPD  390 (515)
Q Consensus       377 ~~~~~i~~~~~~~~  390 (515)
                      .|.+.+...+|+|-
T Consensus       413 ~~~g~~~~p~wsp~  426 (429)
T PRK01742        413 GSDGQVKFPAWSPY  426 (429)
T ss_pred             CCCCCCCCcccCCC
Confidence            88888999999984

>KOG1334|consensus

Probab=99.82  E-value=4.4e-19  Score=153.03  Aligned_cols=311  Identities=18%  Similarity=0.223  Sum_probs=225.8

Q ss_pred             eeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcC--CCCEEEEecCCCcEEE
Q psy17610        158 ELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQ--DGTRLLSGGGEGQVRI  235 (515)
Q Consensus       158 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~i  235 (515)
                      ....+..|.+.|..+.|...|..|++++.|..|.+||...++....+..+|...|....|-|  +.+.+++.+.||++++
T Consensus       134 l~~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~  213 (559)
T KOG1334|consen  134 LQKKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRV  213 (559)
T ss_pred             hhhcccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceee
Confidence            44567789999999999999999999999999999999999999888899999998888988  4567999999999999


Q ss_pred             EEccCCceee-EEeeccccCceEEEEEecCC-CEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEE
Q psy17610        236 WKLTRESQSL-QCVLKEHTSSVSVIQIKSDS-KEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCS  313 (515)
Q Consensus       236 w~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  313 (515)
                      =.+....... ...+..|.++|..++..|+. ..|++++.|+.+.-+|++...+...+.                  +-.
T Consensus       214 s~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~------------------cr~  275 (559)
T KOG1334|consen  214 SEILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFV------------------CRE  275 (559)
T ss_pred             eeeccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceee------------------eec
Confidence            8775333222 44566799999999998865 458899999999999987654432211                  000


Q ss_pred             CCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCC-CEEEEEcCCCeEEEEEccCCe------eeeecc------CCCC
Q psy17610        314 TNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDG-KYFLTGGADQIVKMWMYREGV------PCFVGI------GHAA  380 (515)
Q Consensus       314 ~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~------~~~~~~------~~~~  380 (515)
                      .+..                  ..-....++..|.. ..+++|+.|..+++||.+.-.      .+..+.      ...-
T Consensus       276 ~~~~------------------~~v~L~~Ia~~P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v  337 (559)
T KOG1334|consen  276 ADEK------------------ERVGLYTIAVDPRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPV  337 (559)
T ss_pred             cCCc------------------cceeeeeEecCCCCccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcc
Confidence            0000                  00234567777744 478999999999999986421      122222      2234


Q ss_pred             CeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcc--cEEEee-eccCCcEEE
Q psy17610        381 SITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPS--MIMSAA-YHPSEVQLI  457 (515)
Q Consensus       381 ~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~~~-~s~~~~~l~  457 (515)
                      .|++++|+.++.-|.++-.|-.|+++.-..............       .........+|..  .|..+- |.|...+++
T Consensus       338 ~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p~~~s~~-------~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVv  410 (559)
T KOG1334|consen  338 NITGLVYSHDGSELLASYNDEDIYLFNKSMGDGSEPDPSSPR-------EQYVKRVYKGHRNSRTVKGVNFFGPRSEYVV  410 (559)
T ss_pred             cceeEEecCCccceeeeecccceEEeccccccCCCCCCCcch-------hhccchhhcccccccccceeeeccCccceEE
Confidence            699999997766666666777899984332221110000000       0111111223322  244443 578899999


Q ss_pred             EeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEEEEE
Q psy17610        458 TCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICL  512 (515)
Q Consensus       458 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~  512 (515)
                      +|++-|.|.||+-.+++.++-+++.. ..|+||.-+|--..||++|-|..|+||.
T Consensus       411 SGSDCGhIFiW~K~t~eii~~MegDr-~VVNCLEpHP~~PvLAsSGid~DVKIWT  464 (559)
T KOG1334|consen  411 SGSDCGHIFIWDKKTGEIIRFMEGDR-HVVNCLEPHPHLPVLASSGIDHDVKIWT  464 (559)
T ss_pred             ecCccceEEEEecchhHHHHHhhccc-ceEeccCCCCCCchhhccCCccceeeec
Confidence            99999999999999999999999987 6999999999999999999999999995

>KOG0290|consensus

Probab=99.82  E-value=3.1e-18  Score=138.08  Aligned_cols=234  Identities=16%  Similarity=0.173  Sum_probs=174.4

Q ss_pred             ecCCCcEEEEEEecCCC-----EEEEEecCceEEEEECCCCce---eEEe-----eccCccCeEEEEeCCCCc-EEEEEe
Q psy17610         78 LKDDSGISSLQYNPVNN-----KVFVGTVNCEIFLIDMNSGFT---LTLV-----NTCHTSAIYDLQFPVNFS-SVFATC  143 (515)
Q Consensus        78 ~~~~~~v~~~~~s~~~~-----~l~~~~~d~~i~iw~~~~~~~---~~~~-----~~~h~~~v~~~~~~~~~~-~l~~~~  143 (515)
                      ..|.-+++.+.|.|+..     +||+. .| .+++|.+...+.   +...     ...+.+++++..|+.-.. ++.+++
T Consensus        93 fd~~YP~tK~~wiPd~~g~~pdlLATs-~D-~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSS  170 (364)
T KOG0290|consen   93 FDHPYPVTKLMWIPDSKGVYPDLLATS-SD-FLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSS  170 (364)
T ss_pred             CCCCCCccceEecCCccccCcchhhcc-cC-eEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeec
Confidence            47889999999999763     45553 34 799999874211   1111     123667999999987544 555555


Q ss_pred             cCCcEEEEeCCCCc---eeEEEEecCeEEEEEEEeeCC-CEEEEEeCCCeEEEEecCCCceEEEecCC-C-CCCeEEEEE
Q psy17610        144 SKNDIRIWSVRTLN---ELLRISVMNMICACIVFTYDG-KAILSGWNDGFIRCFTPQSGKLKFIIPNA-H-NRGVTALAI  217 (515)
Q Consensus       144 ~d~~i~iw~~~~~~---~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~~~~~~~~~~~~~~~~-~-~~~v~~~~~  217 (515)
                      -|-+..|||++++.   ...++-.|..+|..++|...+ +.+++.+.||.+++||++..+....+... . ..+...++|
T Consensus       171 iDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLsw  250 (364)
T KOG0290|consen  171 IDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSW  250 (364)
T ss_pred             ccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeecc
Confidence            69999999999873   356678899999999999865 47889999999999999987654333222 2 567889999


Q ss_pred             cC-CCCEEEEecCC-CcEEEEEccCCceeeEEeeccccCceEEEEEecC-CCEEEEEeCCCcEEEEEcccceE------E
Q psy17610        218 TQ-DGTRLLSGGGE-GQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSD-SKEAMSASTDGTCVLWDLIKSTR------L  288 (515)
Q Consensus       218 ~~-~~~~l~~~~~d-~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~------~  288 (515)
                      ++ |-+++|+-..| ..|.+.|++. ...++..+++|...|..++|.|. ...+.+++.|..+.+||+.+...      +
T Consensus       251 nkqDpnymATf~~dS~~V~iLDiR~-P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dPi  329 (364)
T KOG0290|consen  251 NKQDPNYMATFAMDSNKVVILDIRV-PCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDPI  329 (364)
T ss_pred             CcCCchHHhhhhcCCceEEEEEecC-CCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccccCCCCch
Confidence            98 55677765544 5799999984 45667789999999999999995 56799999999999999976433      3


Q ss_pred             EEEEcCccEEEEEEcCC-CcEEEEEEC
Q psy17610        289 IIMILPSMIMSAAYHPS-EVQLITCST  314 (515)
Q Consensus       289 ~~~~~~~~~~~~~~~~~-~~~l~~~~~  314 (515)
                      ..+....+|..+.|++. ...++.+..
T Consensus       330 lay~a~~EVNqi~Ws~~~~Dwiai~~~  356 (364)
T KOG0290|consen  330 LAYTAGGEVNQIQWSSSQPDWIAICFG  356 (364)
T ss_pred             hhhhccceeeeeeecccCCCEEEEEec
Confidence            33445678999999974 556655543

>KOG1912|consensus

Probab=99.81  E-value=5.8e-17  Score=147.98  Aligned_cols=374  Identities=13%  Similarity=0.143  Sum_probs=239.2

Q ss_pred             cCCCcEEEEEEecCC------------CEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCC---CC-cEEEEE
Q psy17610         79 KDDSGISSLQYNPVN------------NKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPV---NF-SSVFAT  142 (515)
Q Consensus        79 ~~~~~v~~~~~s~~~------------~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~---~~-~~l~~~  142 (515)
                      .|...|+.+.|.|..            -+||++...|.|.+||...+..+. .+..|..++..++|-|   +. ..|++.
T Consensus        53 ~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s~~~-~l~~~~~~~qdl~W~~~rd~Srd~LlaI  131 (1062)
T KOG1912|consen   53 LHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLASVIN-WLSHSNDSVQDLCWVPARDDSRDVLLAI  131 (1062)
T ss_pred             cCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhhhhh-hhcCCCcchhheeeeeccCcchheeEEe
Confidence            366778888877632            256777788999999999864444 4555889999999965   33 467777


Q ss_pred             ecCCcEEEEeCCCCceeEEEEecCeEEEEEEEee-CCCEEEEEeCCCeEEEEecCC-------CceEEEecCCCCC----
Q psy17610        143 CSKNDIRIWSVRTLNELLRISVMNMICACIVFTY-DGKAILSGWNDGFIRCFTPQS-------GKLKFIIPNAHNR----  210 (515)
Q Consensus       143 ~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~~~~~~-------~~~~~~~~~~~~~----  210 (515)
                      .....+.+||..+|+.............|+.+.| |.+.+..-+..|.+.+-+.-.       ++..+ +...|..    
T Consensus       132 h~ss~lvLwntdtG~k~Wk~~ys~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l~~sep~~pgk~~q-I~sd~Sdl~~l  210 (1062)
T KOG1912|consen  132 HGSSTLVLWNTDTGEKFWKYDYSHEILSCFRVDPFDSRHFCVLGSKGFVLSCKDLGLSEPDVPGKEFQ-ITSDHSDLAHL  210 (1062)
T ss_pred             cCCcEEEEEEccCCceeeccccCCcceeeeeeCCCCcceEEEEccCceEEEEeccCCCCCCCCceeEE-EecCccchhhh
Confidence            7789999999999999999988888888899988 556777777777777665421       12221 1122222    


Q ss_pred             ------------C---------eEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCC--CE
Q psy17610        211 ------------G---------VTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDS--KE  267 (515)
Q Consensus       211 ------------~---------v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~  267 (515)
                                  .         ...++|+|.-+.++.......+.++|++-  ........-..+.+.-+.+-|++  ..
T Consensus       211 ere~at~ns~ts~~~sa~fity~a~faf~p~~rn~lfi~~prellv~dle~--~~~l~vvpier~~akfv~vlP~~~rd~  288 (1062)
T KOG1912|consen  211 ERETATGNSTTSTPASAYFITYCAQFAFSPHWRNILFITFPRELLVFDLEY--ECCLAVVPIERGGAKFVDVLPDPRRDA  288 (1062)
T ss_pred             hhhhhccccccCCCcchhHHHHHHhhhcChhhhceEEEEeccceEEEcchh--hceeEEEEeccCCcceeEeccCCCcce
Confidence                        0         11246677655555556667899999853  33444444445556667776655  46


Q ss_pred             EEEEeCCCcEEEEEcccc----------------eEEEEEEcC--ccEEEEEEcCC-CcEEEEEECCCeEEEEeCCCCce
Q psy17610        268 AMSASTDGTCVLWDLIKS----------------TRLIIMILP--SMIMSAAYHPS-EVQLITCSTNKMIDYWETCDGSI  328 (515)
Q Consensus       268 l~~~~~d~~i~iwd~~~~----------------~~~~~~~~~--~~~~~~~~~~~-~~~l~~~~~~~~i~~~d~~~~~~  328 (515)
                      +++...||.+.+|-.+..                +....+...  ..+......|. ...++.-..+|...+|.+.+++.
T Consensus       289 LfclH~nG~ltirvrk~~~~~f~~~~~~l~~dl~~Q~~~vr~m~~~rp~~~~~cPs~~sa~avl~s~g~~~~w~l~~~ri  368 (1062)
T KOG1912|consen  289 LFCLHSNGRLTIRVRKEEPTEFKKPNASLSMDLGEQVHVVRPMEEFRPVIGASCPSTPSALAVLYSSGDSTFWQLSNGRI  368 (1062)
T ss_pred             EEEEecCCeEEEEEeeccCccccccchhhccccccceEEEeechhcccceeecCCCChhhhhhhhhcchhHHHhhhcCCc
Confidence            889999999999965431                111111111  11222233343 33344444566677777664432


Q ss_pred             EEEE------------------------------ecCCCccEEEEEEcC-----------CC-------CEEEEEcCCCe
Q psy17610        329 IRSL------------------------------EGSDVAAVNCVDFVD-----------DG-------KYFLTGGADQI  360 (515)
Q Consensus       329 ~~~~------------------------------~~~~~~~i~~~~~~~-----------~~-------~~l~~~~~dg~  360 (515)
                      ....                              .+.+.....+....|           .+       .++|.|...|+
T Consensus       369 ~~~~~s~~iel~~pf~f~~~~~~v~k~~l~~LS~dg~h~sGs~~~~~~p~p~~t~~~~~p~~n~~~~~~pLvAvGT~sGT  448 (1062)
T KOG1912|consen  369 HLDYRSSSIELVLPFDFNLSTKLVGKTSLISLSDDGSHSSGSTCVRMRPMPELTKVENDPGGNTPAGTVPLVAVGTNSGT  448 (1062)
T ss_pred             CcccccccccccccccccCceeehhhccccchhhcCCCCCCceeeecccCcccceeecCCCCCccceeeeeEEeecCCce
Confidence            1100                              011112222322222           22       26789999999


Q ss_pred             EEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEe---------CCCcEEEEeCCCCcCccCCCcccceeeeccccc
Q psy17610        361 VKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVS---------ADGGIFLWTFPELEDDVGDSRSLSSKISRSTAR  431 (515)
Q Consensus       361 i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~---------~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~  431 (515)
                      |.++|+.++.....+.-|...|.++.|-...+++-.+.         .-+.+.+-|++++.....               
T Consensus       449 V~vvdvst~~v~~~fsvht~~VkgleW~g~sslvSfsys~~n~~sg~vrN~l~vtdLrtGlsk~f---------------  513 (1062)
T KOG1912|consen  449 VDVVDVSTNAVAASFSVHTSLVKGLEWLGNSSLVSFSYSHVNSASGGVRNDLVVTDLRTGLSKRF---------------  513 (1062)
T ss_pred             EEEEEecchhhhhhhcccccceeeeeeccceeEEEeeeccccccccceeeeEEEEEccccccccc---------------
Confidence            99999999998889999999999999987665443222         123466667766532111               


Q ss_pred             ccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCC
Q psy17610        432 STRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDG  473 (515)
Q Consensus       432 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~  473 (515)
                        +........+|+.+..|..++||+..-.+.-+.+||+++.
T Consensus       514 --R~l~~~despI~~irvS~~~~yLai~Fr~~plEiwd~kt~  553 (1062)
T KOG1912|consen  514 --RGLQKPDESPIRAIRVSSSGRYLAILFRREPLEIWDLKTL  553 (1062)
T ss_pred             --ccCCCCCcCcceeeeecccCceEEEEecccchHHHhhccc
Confidence              1111123466999999999999999999999999998653

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.81  E-value=8.8e-18  Score=157.02  Aligned_cols=235  Identities=15%  Similarity=0.194  Sum_probs=167.4

Q ss_pred             CceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecC---CcEEEEeCCCCceeEEEEecCeEEEEEEEeeCC
Q psy17610        102 NCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSK---NDIRIWSVRTLNELLRISVMNMICACIVFTYDG  178 (515)
Q Consensus       102 d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d---~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~  178 (515)
                      +..|++||.+.. ... .+..|...+.+++|+|||+.|+.++.+   ..|.+||+.+++... +....+....++|+|||
T Consensus       183 ~~~i~i~d~dg~-~~~-~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~-l~~~~g~~~~~~wSPDG  259 (429)
T PRK01742        183 PYEVRVADYDGF-NQF-IVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKV-VASFRGHNGAPAFSPDG  259 (429)
T ss_pred             eEEEEEECCCCC-Cce-EeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEE-EecCCCccCceeECCCC
Confidence            468999999764 333 345578889999999999999888753   369999998875432 22222334568999999


Q ss_pred             CEEEEEe-CCCeEEE--EecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEec-CCCcEEEEEccCCceeeEEeeccccC
Q psy17610        179 KAILSGW-NDGFIRC--FTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGG-GEGQVRIWKLTRESQSLQCVLKEHTS  254 (515)
Q Consensus       179 ~~l~~~~-~dg~i~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iw~~~~~~~~~~~~~~~~~~  254 (515)
                      +.|+.+. .+|.+.+  ||+.+++... + ..+...+....|+|||+.|+..+ .++...+|+++....... .+ .+..
T Consensus       260 ~~La~~~~~~g~~~Iy~~d~~~~~~~~-l-t~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~-~l-~~~~  335 (429)
T PRK01742        260 SRLAFASSKDGVLNIYVMGANGGTPSQ-L-TSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGAS-LV-GGRG  335 (429)
T ss_pred             CEEEEEEecCCcEEEEEEECCCCCeEe-e-ccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeE-Ee-cCCC
Confidence            9888764 5776555  5666666543 3 35666788999999999877554 578889998754333222 22 3333


Q ss_pred             ceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeC--CCCceEEEE
Q psy17610        255 SVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWET--CDGSIIRSL  332 (515)
Q Consensus       255 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~--~~~~~~~~~  332 (515)
                        ....|+|+|+.++..+.++ +.+||+.+++...... ........|+|++++++.++.++...+|++  .+++..+.+
T Consensus       336 --~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~~~lt~-~~~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~G~~~~~l  411 (429)
T PRK01742        336 --YSAQISADGKTLVMINGDN-VVKQDLTSGSTEVLSS-TFLDESPSISPNGIMIIYSSTQGLGKVLQLVSADGRFKARL  411 (429)
T ss_pred             --CCccCCCCCCEEEEEcCCC-EEEEECCCCCeEEecC-CCCCCCceECCCCCEEEEEEcCCCceEEEEEECCCCceEEc
Confidence              4578999999998887764 6669998876543322 223456789999999999999888887765  367778888


Q ss_pred             ecCCCccEEEEEEcCC
Q psy17610        333 EGSDVAAVNCVDFVDD  348 (515)
Q Consensus       333 ~~~~~~~i~~~~~~~~  348 (515)
                      ..+. +.+...+|+|-
T Consensus       412 ~~~~-g~~~~p~wsp~  426 (429)
T PRK01742        412 PGSD-GQVKFPAWSPY  426 (429)
T ss_pred             cCCC-CCCCCcccCCC
Confidence            7654 66788889884

>KOG1334|consensus

Probab=99.80  E-value=7.6e-19  Score=151.58  Aligned_cols=294  Identities=15%  Similarity=0.224  Sum_probs=228.4

Q ss_pred             EEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCC--CcEEEEEecCCcEEEEe
Q psy17610         75 LYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVN--FSSVFATCSKNDIRIWS  152 (515)
Q Consensus        75 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~~~~~d~~i~iw~  152 (515)
                      ..+.+|.+.|..|.|+..|..|++|+.|..|.+||+..+........+|...|..-.|-|.  .+.+++++.||.+++=.
T Consensus       136 ~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~  215 (559)
T KOG1334|consen  136 KKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSE  215 (559)
T ss_pred             hcccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceeeee
Confidence            4567899999999999999999999999999999999988888888899999999888773  46788888999999877


Q ss_pred             CCCCc---eeEEEEecCeEEEEEEEeeCCC-EEEEEeCCCeEEEEecCCCceEEEe--cCCCCC---CeEEEEEcCC-CC
Q psy17610        153 VRTLN---ELLRISVMNMICACIVFTYDGK-AILSGWNDGFIRCFTPQSGKLKFII--PNAHNR---GVTALAITQD-GT  222 (515)
Q Consensus       153 ~~~~~---~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~~~~~~~~~~~~--~~~~~~---~v~~~~~~~~-~~  222 (515)
                      +....   ....+..|.++|.-++..|+.. .|.+++.|+.+.-+|++.+.+...+  ...+..   ....++.+|. ..
T Consensus       216 i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~nt~  295 (559)
T KOG1334|consen  216 ILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPRNTN  295 (559)
T ss_pred             eccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCCCCcc
Confidence            65322   2455678999999999998764 6789999999999999887653322  123333   5678888984 45


Q ss_pred             EEEEecCCCcEEEEEccCCceee----EEe------eccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceE-----
Q psy17610        223 RLLSGGGEGQVRIWKLTRESQSL----QCV------LKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTR-----  287 (515)
Q Consensus       223 ~l~~~~~d~~i~iw~~~~~~~~~----~~~------~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~-----  287 (515)
                      .+++++.|..+++||.+.-....    +..      .....-.|++++|+.++.-++++..|-.|+++.-..+.-     
T Consensus       296 ~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p~~  375 (559)
T KOG1334|consen  296 EFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGSEPDP  375 (559)
T ss_pred             ccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEeccccccCCCCCC
Confidence            89999999999999986422210    111      112344689999998888888888888899995432211     


Q ss_pred             -------EEE-EEcC---ccEEEEE-EcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEE
Q psy17610        288 -------LII-MILP---SMIMSAA-YHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTG  355 (515)
Q Consensus       288 -------~~~-~~~~---~~~~~~~-~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~  355 (515)
                             ... +..+   ..|..+- |-|...++++|+.-|.|.+|+-.+++.++.+++.. .-|+|+.-+|--..||+.
T Consensus       376 ~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~MegDr-~VVNCLEpHP~~PvLAsS  454 (559)
T KOG1334|consen  376 SSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGDR-HVVNCLEPHPHLPVLASS  454 (559)
T ss_pred             CcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHHHHHhhccc-ceEeccCCCCCCchhhcc
Confidence                   111 1111   1355555 46788999999999999999999999999888877 589999999999999999


Q ss_pred             cCCCeEEEEEccCC
Q psy17610        356 GADQIVKMWMYREG  369 (515)
Q Consensus       356 ~~dg~i~i~d~~~~  369 (515)
                      +-|..|+||-..+.
T Consensus       455 Gid~DVKIWTP~~~  468 (559)
T KOG1334|consen  455 GIDHDVKIWTPLTA  468 (559)
T ss_pred             CCccceeeecCCcc
Confidence            99999999987443

>KOG2315|consensus

Probab=99.80  E-value=4.6e-16  Score=137.22  Aligned_cols=318  Identities=14%  Similarity=0.134  Sum_probs=220.3

Q ss_pred             CCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEe-----cC-----CcEEE
Q psy17610         81 DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATC-----SK-----NDIRI  150 (515)
Q Consensus        81 ~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-----~d-----~~i~i  150 (515)
                      ..+.+..++|++|+++|.+..+ .++|++..++..+....  -. .+.++.|+|-|.+|.+--     .+     -.+.+
T Consensus        34 ~~~~~v~~~S~~G~lfA~~~~~-~v~i~~~~~~~~~lt~~--~~-~~~~L~fSP~g~yL~T~e~~~i~~~~~~~~pn~~v  109 (566)
T KOG2315|consen   34 SRPCNVFAYSNNGRLFAYSDNQ-VVKVFEIATLKVVLCVE--LK-KTYDLLFSPKGNYLLTWEPWAIYGPKNASNPNVLV  109 (566)
T ss_pred             CCcceeEEEcCCCcEEEEEcCC-eEEEEEccCCcEEEEec--cc-eeeeeeecccccccccccccccccCCCCCCCceee
Confidence            4557888999999988887655 89999998864333332  22 789999999998876532     12     34789


Q ss_pred             EeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCC--CEEEE--
Q psy17610        151 WSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDG--TRLLS--  226 (515)
Q Consensus       151 w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~--  226 (515)
                      |+++++.....+......-++..|++|..+.+ --..+.+++|++.+.+....  .-|...|+.+.++|.+  ..+++  
T Consensus       110 ~~vet~~~~s~~q~k~Q~~W~~qfs~dEsl~a-rlv~nev~f~~~~~f~~~~~--kl~~~~i~~f~lSpgp~~~~vAvyv  186 (566)
T KOG2315|consen  110 YNVETGVQRSQIQKKMQNGWVPQFSIDESLAA-RLVSNEVQFYDLGSFKTIQH--KLSVSGITMLSLSPGPEPPFVAVYV  186 (566)
T ss_pred             eeeccceehhheehhhhcCcccccccchhhhh-hhhcceEEEEecCCccceee--eeeccceeeEEecCCCCCceEEEEc
Confidence            99999665555553333336889998876433 33456799999887555443  2478889999999863  34443  


Q ss_pred             ---ecCCCcEEEEEccCCceeeEEeec-cccCceEEEEEecCCCEEE-EEe--C---------CCcEEEEEcccceEEEE
Q psy17610        227 ---GGGEGQVRIWKLTRESQSLQCVLK-EHTSSVSVIQIKSDSKEAM-SAS--T---------DGTCVLWDLIKSTRLII  290 (515)
Q Consensus       227 ---~~~d~~i~iw~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~-~~~--~---------d~~i~iwd~~~~~~~~~  290 (515)
                         .+.-+.++||.............+ -....=..+.|++-|.-|+ .++  -         +.++++.++........
T Consensus       187 Pe~kGaPa~vri~~~~~~~~~~~~a~ksFFkadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~  266 (566)
T KOG2315|consen  187 PEKKGAPASVRIYKYPEEGQHQPVANKSFFKADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVP  266 (566)
T ss_pred             cCCCCCCcEEEEeccccccccchhhhccccccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEe
Confidence               355678999988521111100000 0112223467777665433 222  1         34688888886667777


Q ss_pred             EEcCccEEEEEEcCCCcEEEE--EECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcC---CCeEEEEE
Q psy17610        291 MILPSMIMSAAYHPSEVQLIT--CSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA---DQIVKMWM  365 (515)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~l~~--~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---dg~i~i~d  365 (515)
                      +...++|.++.|+|+++.+++  |..-..+.+||+ .+.++..+..   ++-+++-|+|.|++++.++-   .|.+.+||
T Consensus       267 L~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnl-r~~~v~df~e---gpRN~~~fnp~g~ii~lAGFGNL~G~mEvwD  342 (566)
T KOG2315|consen  267 LLKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNL-RGKPVFDFPE---GPRNTAFFNPHGNIILLAGFGNLPGDMEVWD  342 (566)
T ss_pred             cCCCCCceEEEECCCCCEEEEEEecccceEEEEcC-CCCEeEeCCC---CCccceEECCCCCEEEEeecCCCCCceEEEe
Confidence            777899999999999987765  455778999997 4555555543   56678999999999988765   47899999


Q ss_pred             ccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeC------CCcEEEEeCCCC
Q psy17610        366 YREGVPCFVGIGHAASITKIKISPDKKVIVSVSA------DGGIFLWTFPEL  411 (515)
Q Consensus       366 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~------dg~i~iw~~~~~  411 (515)
                      +.+.+++..+....  -+-+.|+|||++++|+..      |+.++||+....
T Consensus       343 v~n~K~i~~~~a~~--tt~~eW~PdGe~flTATTaPRlrvdNg~KiwhytG~  392 (566)
T KOG2315|consen  343 VPNRKLIAKFKAAN--TTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYTGS  392 (566)
T ss_pred             ccchhhccccccCC--ceEEEEcCCCcEEEEEeccccEEecCCeEEEEecCc
Confidence            99988887775443  356899999999999875      678999998654

>KOG1272|consensus

Probab=99.79  E-value=6.3e-19  Score=151.14  Aligned_cols=274  Identities=17%  Similarity=0.213  Sum_probs=216.6

Q ss_pred             CCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeE
Q psy17610         81 DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELL  160 (515)
Q Consensus        81 ~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~  160 (515)
                      .-.-..+.++.+|++|+.|+..|.|-.+|+.++ .+...+. -...|.++.|-.+. .+++++..+.+.|||- .|.+++
T Consensus       129 eFGPY~~~ytrnGrhlllgGrKGHlAa~Dw~t~-~L~~Ei~-v~Etv~Dv~~LHne-q~~AVAQK~y~yvYD~-~GtElH  204 (545)
T KOG1272|consen  129 EFGPYHLDYTRNGRHLLLGGRKGHLAAFDWVTK-KLHFEIN-VMETVRDVTFLHNE-QFFAVAQKKYVYVYDN-NGTELH  204 (545)
T ss_pred             ccCCeeeeecCCccEEEecCCccceeeeecccc-eeeeeee-hhhhhhhhhhhcch-HHHHhhhhceEEEecC-CCcEEe
Confidence            345568899999999999999999999999995 4443333 45679999998775 5566667788999994 577888


Q ss_pred             EEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccC
Q psy17610        161 RISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTR  240 (515)
Q Consensus       161 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~  240 (515)
                      .+..+ ..|..+.|.|.--+|++++..|.++.-|+.+|+.+..+ ....+.+..++-+|-+..+-+|..+|+|.+|... 
T Consensus       205 Clk~~-~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~-~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~-  281 (545)
T KOG1272|consen  205 CLKRH-IRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASI-RTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPN-  281 (545)
T ss_pred             ehhhc-CchhhhcccchhheeeecccCCceEEEeechhhhhHHH-HccCCccchhhcCCccceEEEcCCCceEEecCCC-
Confidence            77755 46788999999989999999999999999999999888 4667788899999988899999999999999984 


Q ss_pred             CceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEE
Q psy17610        241 ESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDY  320 (515)
Q Consensus       241 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~  320 (515)
                       ...+...+..|.++|.++++.++|.++++++.|..++|||++....+..+..+.+...++++..|  +++.+....+.+
T Consensus       282 -skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~tp~~a~~ls~Sqkg--lLA~~~G~~v~i  358 (545)
T KOG1272|consen  282 -SKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRTPHPASNLSLSQKG--LLALSYGDHVQI  358 (545)
T ss_pred             -CcchHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeeccccccceeecCCCcccccccccc--ceeeecCCeeee
Confidence             45566677889999999999999999999999999999999999888888888888888887655  445556677888


Q ss_pred             EeC-CCCc--eEEEE-ecCCCccEEEEEEcCCCCEEEEEcCCCeEEEE
Q psy17610        321 WET-CDGS--IIRSL-EGSDVAAVNCVDFVDDGKYFLTGGADQIVKMW  364 (515)
Q Consensus       321 ~d~-~~~~--~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~  364 (515)
                      |.- -.+.  .-..+ .....+.|..+.|.|-...|-+|...|.-.+.
T Consensus       359 w~d~~~~s~~~~~pYm~H~~~~~V~~l~FcP~EDvLGIGH~~G~tsil  406 (545)
T KOG1272|consen  359 WKDALKGSGHGETPYMNHRCGGPVEDLRFCPYEDVLGIGHAGGITSIL  406 (545)
T ss_pred             ehhhhcCCCCCCcchhhhccCcccccceeccHHHeeeccccCCceeEe
Confidence            842 2211  11111 11112578889999987777777766654443

>KOG2111|consensus

Probab=99.79  E-value=1.2e-15  Score=125.17  Aligned_cols=234  Identities=15%  Similarity=0.219  Sum_probs=164.2

Q ss_pred             EEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCC--eEEEEEcCCCCEEE-EecCC------CcEEEEEcc
Q psy17610        169 CACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRG--VTALAITQDGTRLL-SGGGE------GQVRIWKLT  239 (515)
Q Consensus       169 v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~-~~~~d------~~i~iw~~~  239 (515)
                      ..+++|+.|...++++.++| .++|+.+.-+..... ..+...  +..+-|  ..++++ +|+.+      ..+.|||= 
T Consensus         8 ~lsvs~NQD~ScFava~~~G-friyn~~P~ke~~~r-~~~~~G~~~veMLf--R~N~laLVGGg~~pky~pNkviIWDD-   82 (346)
T KOG2111|consen    8 TLSVSFNQDHSCFAVATDTG-FRIYNCDPFKESASR-QFIDGGFKIVEMLF--RSNYLALVGGGSRPKYPPNKVIIWDD-   82 (346)
T ss_pred             eeEEEEccCCceEEEEecCc-eEEEecCchhhhhhh-ccccCchhhhhHhh--hhceEEEecCCCCCCCCCceEEEEec-
Confidence            44589999999999998888 899998764432221 122222  222223  334554 34333      47999993 


Q ss_pred             CCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcc-cceEEEEEEc---CccEEEEEEcCCCcEEEE-EEC
Q psy17610        240 RESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLI-KSTRLIIMIL---PSMIMSAAYHPSEVQLIT-CST  314 (515)
Q Consensus       240 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~-~~~~~~~~~~---~~~~~~~~~~~~~~~l~~-~~~  314 (515)
                       ....++..+ ....+|.++.+.++  .+++.- ++.|.+|.+. +.+.+..+..   |....+++-..+...|+. |..
T Consensus        83 -~k~~~i~el-~f~~~I~~V~l~r~--riVvvl-~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~LafPg~k  157 (346)
T KOG2111|consen   83 -LKERCIIEL-SFNSEIKAVKLRRD--RIVVVL-ENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLAFPGFK  157 (346)
T ss_pred             -ccCcEEEEE-EeccceeeEEEcCC--eEEEEe-cCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEEcCCCc
Confidence             333344333 35678999998765  455544 4689999987 4455555543   334333333334444544 345


Q ss_pred             CCeEEEEeCCCCce--EEEEecCCCccEEEEEEcCCCCEEEEEcCCCe-EEEEEccCCeeeeeccCC--CCCeeEEEECC
Q psy17610        315 NKMIDYWETCDGSI--IRSLEGSDVAAVNCVDFVDDGKYFLTGGADQI-VKMWMYREGVPCFVGIGH--AASITKIKISP  389 (515)
Q Consensus       315 ~~~i~~~d~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~-i~i~d~~~~~~~~~~~~~--~~~i~~~~~~~  389 (515)
                      -|.|++-|+...+.  ...+..|. ..|.|++++.+|.++|+++..|+ |+|||..+|+++.+++..  ...|.+|+|||
T Consensus       158 ~GqvQi~dL~~~~~~~p~~I~AH~-s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp  236 (346)
T KOG2111|consen  158 TGQVQIVDLASTKPNAPSIINAHD-SDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSP  236 (346)
T ss_pred             cceEEEEEhhhcCcCCceEEEccc-CceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCC
Confidence            69999999987666  35566665 99999999999999999999997 899999999999888643  45799999999


Q ss_pred             CCcEEEEEeCCCcEEEEeCCCCcC
Q psy17610        390 DKKVIVSVSADGGIFLWTFPELED  413 (515)
Q Consensus       390 ~~~~l~~~~~dg~i~iw~~~~~~~  413 (515)
                      +..+|+++|..|++.|+.+.....
T Consensus       237 ~~s~LavsSdKgTlHiF~l~~~~~  260 (346)
T KOG2111|consen  237 NSSWLAVSSDKGTLHIFSLRDTEN  260 (346)
T ss_pred             CccEEEEEcCCCeEEEEEeecCCC
Confidence            999999999999999999987543

>KOG2321|consensus

Probab=99.79  E-value=1.2e-16  Score=141.01  Aligned_cols=283  Identities=12%  Similarity=0.172  Sum_probs=210.5

Q ss_pred             cCccCeEEEEeCCCCcEEEEEec-CCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCce
Q psy17610        122 CHTSAIYDLQFPVNFSSVFATCS-KNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKL  200 (515)
Q Consensus       122 ~h~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~  200 (515)
                      .|...-+.+..+|||+++++++. .-.|++||+.+......-......|...-++.|-..++.-..|..|.+...-..-.
T Consensus        49 e~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLKFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak~G~hy  128 (703)
T KOG2321|consen   49 EMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAKYGRHY  128 (703)
T ss_pred             CCccccceeEecCCCcEEEEecccCCceEEEEcccceeeeeecccccceeEEEeccchhhheEeecCceeeehhhcCeee
Confidence            36777899999999999988876 78899999986554333322334455555555655666667777777654322111


Q ss_pred             EEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEE
Q psy17610        201 KFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLW  280 (515)
Q Consensus       201 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw  280 (515)
                      ...++    ..-..++++.-.--|+.++....|+-+++  ..+..+..+....+.++++..++-..+|++|+.+|.|..|
T Consensus       129 ~~RIP----~~GRDm~y~~~scDly~~gsg~evYRlNL--EqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfw  202 (703)
T KOG2321|consen  129 RTRIP----KFGRDMKYHKPSCDLYLVGSGSEVYRLNL--EQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFW  202 (703)
T ss_pred             eeecC----cCCccccccCCCccEEEeecCcceEEEEc--cccccccccccccccceeeeecCccceEEecccCceEEEe
Confidence            11221    12245566553333444444456777777  5677777787788999999999999999999999999999


Q ss_pred             EcccceEEEEEEcCcc------------EEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCC
Q psy17610        281 DLIKSTRLIIMILPSM------------IMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDD  348 (515)
Q Consensus       281 d~~~~~~~~~~~~~~~------------~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~  348 (515)
                      |.+....+..+.....            ++++.|+.+|-.+++|+..|.+.+||+++.+++..-......+|..+.|.+.
T Consensus       203 DpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~  282 (703)
T KOG2321|consen  203 DPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLDWQDT  282 (703)
T ss_pred             cchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCCccceeeeccccc
Confidence            9998877766654333            8999999999999999999999999999999988776666678999999875


Q ss_pred             --CCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCc
Q psy17610        349 --GKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELE  412 (515)
Q Consensus       349 --~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  412 (515)
                        ++.+++. ....++|||-.+|+....+.. ...+..+++-|++.+++++-.++.+..|=++...
T Consensus       283 ~~q~~v~S~-Dk~~~kiWd~~~Gk~~asiEp-t~~lND~C~~p~sGm~f~Ane~~~m~~yyiP~LG  346 (703)
T KOG2321|consen  283 DQQNKVVSM-DKRILKIWDECTGKPMASIEP-TSDLNDFCFVPGSGMFFTANESSKMHTYYIPSLG  346 (703)
T ss_pred             CCCceEEec-chHHhhhcccccCCceeeccc-cCCcCceeeecCCceEEEecCCCcceeEEccccC
Confidence              3445544 456899999999998888754 4459999999999999999999888888776543

>KOG2321|consensus

Probab=99.78  E-value=1e-16  Score=141.40  Aligned_cols=278  Identities=16%  Similarity=0.267  Sum_probs=209.3

Q ss_pred             CCCCCeEEEEEcCCCCEEE-EecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccc
Q psy17610        207 AHNRGVTALAITQDGTRLL-SGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKS  285 (515)
Q Consensus       207 ~~~~~v~~~~~~~~~~~l~-~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~  285 (515)
                      .+...-+.|..+|||++++ +|..--.|++||+.+-..+....+  ....|.-.-.+.|-..++.-..|.+|.+...  .
T Consensus        49 e~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLKFERhl--Dae~V~feiLsDD~SK~v~L~~DR~IefHak--~  124 (703)
T KOG2321|consen   49 EMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLKFERHL--DAEVVDFEILSDDYSKSVFLQNDRTIEFHAK--Y  124 (703)
T ss_pred             CCccccceeEecCCCcEEEEecccCCceEEEEcccceeeeeecc--cccceeEEEeccchhhheEeecCceeeehhh--c
Confidence            5667788999999999865 667788999999964443333322  2344555556667666777777888776542  2


Q ss_pred             eEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEE
Q psy17610        286 TRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWM  365 (515)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d  365 (515)
                      -....+..|..-..++++.-..-|++++....|+-+++..|..+..+.... +.++++..++...+|++|+.+|.|..||
T Consensus       125 G~hy~~RIP~~GRDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~~-~~lN~v~in~~hgLla~Gt~~g~VEfwD  203 (703)
T KOG2321|consen  125 GRHYRTRIPKFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETDS-GELNVVSINEEHGLLACGTEDGVVEFWD  203 (703)
T ss_pred             CeeeeeecCcCCccccccCCCccEEEeecCcceEEEEcccccccccccccc-ccceeeeecCccceEEecccCceEEEec
Confidence            334445566667778887766667777777889999999999999988776 8899999999999999999999999999


Q ss_pred             ccCCeeeeecc------CCCC-----CeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccc
Q psy17610        366 YREGVPCFVGI------GHAA-----SITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTR  434 (515)
Q Consensus       366 ~~~~~~~~~~~------~~~~-----~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~  434 (515)
                      .+....+..+.      .|.+     .|+++.|+.+|-.+++|..+|.+.|||++........                 
T Consensus       204 pR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~k-----------------  266 (703)
T KOG2321|consen  204 PRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVK-----------------  266 (703)
T ss_pred             chhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeec-----------------
Confidence            98865554442      2333     4999999999999999999999999999875432111                 


Q ss_pred             eeeecCcccEEEeeeccC--CcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEEEE
Q psy17610        435 LIIMILPSMIMSAAYHPS--EVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKIC  511 (515)
Q Consensus       435 ~~~~~~~~~i~~~~~s~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw  511 (515)
                        -....-+|..+.|.+.  +..+++. +...++|||-.+|+....++..  ..++.+++-|++.+++++-+++.+..|
T Consensus       267 --dh~~e~pi~~l~~~~~~~q~~v~S~-Dk~~~kiWd~~~Gk~~asiEpt--~~lND~C~~p~sGm~f~Ane~~~m~~y  340 (703)
T KOG2321|consen  267 --DHGYELPIKKLDWQDTDQQNKVVSM-DKRILKIWDECTGKPMASIEPT--SDLNDFCFVPGSGMFFTANESSKMHTY  340 (703)
T ss_pred             --ccCCccceeeecccccCCCceEEec-chHHhhhcccccCCceeecccc--CCcCceeeecCCceEEEecCCCcceeE
Confidence              1122345788888766  3455554 3567999999999999988876  469999999999999999888766544

>KOG2111|consensus

Probab=99.78  E-value=1.9e-15  Score=123.96  Aligned_cols=278  Identities=12%  Similarity=0.127  Sum_probs=185.5

Q ss_pred             CeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEE-EEeCC------CcEEEEEcc
Q psy17610        211 GVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAM-SASTD------GTCVLWDLI  283 (515)
Q Consensus       211 ~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d------~~i~iwd~~  283 (515)
                      ...+++|+.|..-+++|..+| .+||+.+.-............-.+..+-|  ..++++ .|+.+      ..+.+||-.
T Consensus         7 ~~lsvs~NQD~ScFava~~~G-friyn~~P~ke~~~r~~~~~G~~~veMLf--R~N~laLVGGg~~pky~pNkviIWDD~   83 (346)
T KOG2111|consen    7 KTLSVSFNQDHSCFAVATDTG-FRIYNCDPFKESASRQFIDGGFKIVEMLF--RSNYLALVGGGSRPKYPPNKVIIWDDL   83 (346)
T ss_pred             ceeEEEEccCCceEEEEecCc-eEEEecCchhhhhhhccccCchhhhhHhh--hhceEEEecCCCCCCCCCceEEEEecc
Confidence            345699999999899887766 89999853211111111111112222222  234444 33332      479999988


Q ss_pred             cceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCC-CCceEEEEecCC-CccEEEEEEcCCCCEEEE-EcCCCe
Q psy17610        284 KSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETC-DGSIIRSLEGSD-VAAVNCVDFVDDGKYFLT-GGADQI  360 (515)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~-~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~-~~~dg~  360 (515)
                      ..+++..+....+|.++.+.++.  +++. ..+.|++|... +.+.++.+.... +....++.-..+..+||. |-.-|.
T Consensus        84 k~~~i~el~f~~~I~~V~l~r~r--iVvv-l~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~LafPg~k~Gq  160 (346)
T KOG2111|consen   84 KERCIIELSFNSEIKAVKLRRDR--IVVV-LENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLAFPGFKTGQ  160 (346)
T ss_pred             cCcEEEEEEeccceeeEEEcCCe--EEEE-ecCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEEcCCCccce
Confidence            88899999999999999998763  3333 46789999987 556666665433 234444444445555554 445689


Q ss_pred             EEEEEccCCee--eeeccCCCCCeeEEEECCCCcEEEEEeCCCc-EEEEeCCCCcCccCCCcccceeeecccccccceee
Q psy17610        361 VKMWMYREGVP--CFVGIGHAASITKIKISPDKKVIVSVSADGG-IFLWTFPELEDDVGDSRSLSSKISRSTARSTRLII  437 (515)
Q Consensus       361 i~i~d~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~-i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  437 (515)
                      |+|-|+...+.  ...+..|...|.+++.+.+|.++||+|..|+ |+|||..+++...+..+.                 
T Consensus       161 vQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG-----------------  223 (346)
T KOG2111|consen  161 VQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRG-----------------  223 (346)
T ss_pred             EEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecC-----------------
Confidence            99999977654  4677899999999999999999999999997 899999877532221111                 


Q ss_pred             ecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeee-----------e-------------cccccceEEEEEEc
Q psy17610        438 MILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRS-----------L-------------EGSDVAAVNCVDFV  493 (515)
Q Consensus       438 ~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~-----------~-------------~~~~~~~v~~~~~s  493 (515)
                       .....|.+++|||+..+||++++.|+++|+.+.....-..           +             .-.. +...-++|-
T Consensus       224 -~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~~~~~~~~~SSl~~~~~~lpky~~S~wS~~~f~l~~-~~~~~~~fg  301 (346)
T KOG2111|consen  224 -VDRADIYCIAFSPNSSWLAVSSDKGTLHIFSLRDTENTEDESSSLSFKRLVLPKYFSSEWSFAKFQLPQ-GTQCIIAFG  301 (346)
T ss_pred             -CchheEEEEEeCCCccEEEEEcCCCeEEEEEeecCCCCccccccccccccccchhcccceeEEEEEccC-CCcEEEEec
Confidence             1234599999999999999999999999998865321111           1             0111 334456776


Q ss_pred             CCCcEEEEeecCCeEEEEEE
Q psy17610        494 DDGKYFLTGGADQIVKICLY  513 (515)
Q Consensus       494 ~~~~~l~s~~~dg~v~iw~~  513 (515)
                      .+.+.++..+.||+-.-+.|
T Consensus       302 ~~~nsvi~i~~Dgsy~k~~f  321 (346)
T KOG2111|consen  302 SETNTVIAICADGSYYKFKF  321 (346)
T ss_pred             CCCCeEEEEEeCCcEEEEEe
Confidence            66566667777776554433

>KOG0974|consensus

Probab=99.78  E-value=3.2e-16  Score=148.08  Aligned_cols=414  Identities=14%  Similarity=0.139  Sum_probs=242.3

Q ss_pred             CCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCe---EEEEeCCCCcEEEEEecCCcEEEEeCCCCc
Q psy17610         81 DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAI---YDLQFPVNFSSVFATCSKNDIRIWSVRTLN  157 (515)
Q Consensus        81 ~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v---~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~  157 (515)
                      .+.|..-.+.-+...++.++.++.+.+||...+.....+........   .-+.++++.-++++++.-+.|.+|+....+
T Consensus        87 s~wi~g~~l~~e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~dn  166 (967)
T KOG0974|consen   87 SDWIFGAKLFEENKKIALVTSRNSLLIRDSKNSSVLSKIQSDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHEDN  166 (967)
T ss_pred             cccccccchhhhcceEEEEEcCceEEEEecccCceehhcCCCceEEEEeEEEEeccCcEEEEEeccccccEEEEeccccC
Confidence            45555566667788899999999999999998654444432222221   223357776788888889999999988545


Q ss_pred             eeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEE
Q psy17610        158 ELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWK  237 (515)
Q Consensus       158 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~  237 (515)
                      ....+.+|.+.+..+.++.||.++++.++|.++++|++++.+.....-.+|...|..++|.|+  .+++++.|-+.++|+
T Consensus       167 ~p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i~t~gedctcrvW~  244 (967)
T KOG0974|consen  167 KPIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RIITVGEDCTCRVWG  244 (967)
T ss_pred             CcceecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccc--eeEEeccceEEEEEe
Confidence            555788999999999999999999999999999999999998876444699999999999998  899999999999998


Q ss_pred             ccCCceeeEEeecccc-CceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEE------cCccEEEEEEcCCCcEEE
Q psy17610        238 LTRESQSLQCVLKEHT-SSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMI------LPSMIMSAAYHPSEVQLI  310 (515)
Q Consensus       238 ~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~  310 (515)
                      .+.   .....+.+|. ..+..++..++....++++.|+.+++|++..........      .........|-.....+.
T Consensus       245 ~~~---~~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~r~~e~~~~~~~~~~s~~kl~~~~f~k~~~~~~  321 (967)
T KOG0974|consen  245 VNG---TQLEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNGRGLEGHVEQSSLLSSIVKLKDDQFVKCDTLLN  321 (967)
T ss_pred             ccc---ceehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhhhhccccccceeeeeeecchhhhcceeeeehHHHHH
Confidence            642   2233666665 468899999998999999999999999986432211111      000111111111000000


Q ss_pred             EEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCC
Q psy17610        311 TCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPD  390 (515)
Q Consensus       311 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~  390 (515)
                      ..-..+...+-+....+.+..+......++..-+  .+..+++.++..+.+.+.-.....    ..++.+-...+.-+|.
T Consensus       322 ~~~~~~~~~~~~~~~~~~l~~~~~~s~~~i~~~~--~~~~~v~~~~~k~~~~v~~~~~~~----~~~~~~~h~~~s~~~~  395 (967)
T KOG0974|consen  322 FANHGGKLSILGNKGEKELITFESDSMLRIIFSC--TNDDWVAHMSNKGDIYVAWHQNTI----VITTSSLHRKLSANPI  395 (967)
T ss_pred             HHhcCCeEeecccccccceeeeeeccCccceehc--cccceeeeccCCCcEEEEEeeccc----CccchhHHHHHhhCcc
Confidence            0000111111111222222222222112221111  123456666666666655443321    1111111111111221


Q ss_pred             Cc-----EEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeE
Q psy17610        391 KK-----VIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMI  465 (515)
Q Consensus       391 ~~-----~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v  465 (515)
                      .+     +...-..+|..+.|.....-.........         ...+.........+.++.-.+....++.|+.-|.+
T Consensus       396 ~~~~~~~~~~~~~~~g~~~~r~~~~~~~~~ad~~~i---------~~~~~f~~~~~~~~~~l~~~~~~~~~l~Gs~~g~l  466 (967)
T KOG0974|consen  396 SQVCEASYVASKLIDGSIQVRNLSGSLESFADVLNI---------RSLKEFRLPFAFRIPCLTSVVEDNLILIGSRHGEL  466 (967)
T ss_pred             cceeeeeeehhhccCCcchhhhhhcccccccceeEE---------eeeeeeccccCCCCcceecccCcceEEEccCcCcE
Confidence            11     12222345566666532211100000000         00111111223346677777777889999999999


Q ss_pred             EEEecCCCeeeeeec---cccc---ceEEEEEEcCCCcEEEEeecCCeEEEEEEe
Q psy17610        466 DYWETCDGSIIRSLE---GSDV---AAVNCVDFVDDGKYFLTGGADQIVKICLYI  514 (515)
Q Consensus       466 ~iwd~~~~~~~~~~~---~~~~---~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~  514 (515)
                      .++++..+.......   .|..   +.+....--++.-++.+.+.||.+-++.+.
T Consensus       467 v~~~l~~~~~~~~~~~~~~~~~~~~~si~~~~~kdn~~~~~~~g~dg~~~~~~~~  521 (967)
T KOG0974|consen  467 VLYNLDEPNDDIVLSLSRSHELDTGSSITCIRSKDNSAIFMTTGRDGYWSTIELI  521 (967)
T ss_pred             EEecCCCCCccceeeccCcccccccccEEEEecCCCcEEEEEecCCcEEEEEEEe
Confidence            999987654322222   1211   344444444455567788899988776653

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=99.78  E-value=1.1e-15  Score=133.29  Aligned_cols=319  Identities=13%  Similarity=0.148  Sum_probs=223.5

Q ss_pred             CCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecC--------------
Q psy17610         80 DDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSK--------------  145 (515)
Q Consensus        80 ~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d--------------  145 (515)
                      -.-++..+++||.|.+|++.... .|.+|.......+..+.  | ..|..+.|+|.+++|.+-+..              
T Consensus        31 ~~~p~~~~~~SP~G~~l~~~~~~-~V~~~~g~~~~~l~~~~--~-~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~  106 (561)
T COG5354          31 ENWPVAYVSESPLGTYLFSEHAA-GVECWGGPSKAKLVRFR--H-PDVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTS  106 (561)
T ss_pred             cCcchhheeecCcchheehhhcc-ceEEccccchhheeeee--c-CCceecccCcccceeeeeccCCccChhhccCCccc
Confidence            45678899999999999998777 49999998865444332  4 359999999999999887643              


Q ss_pred             -CcEEEEeCCCCceeEEEEecCeE--EE-EEEEeeCCCEEEEEeCCCeEEEEecCCCceE-EEecCCCCCCeEEEEEcCC
Q psy17610        146 -NDIRIWSVRTLNELLRISVMNMI--CA-CIVFTYDGKAILSGWNDGFIRCFTPQSGKLK-FIIPNAHNRGVTALAITQD  220 (515)
Q Consensus       146 -~~i~iw~~~~~~~~~~~~~~~~~--v~-~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~  220 (515)
                       +.+.+||..+|..+..+.....+  .. -+.|+.+.+++|-. ....+.++++ ++... ..+..-....|....|+|.
T Consensus       107 ~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARv-v~~sl~i~e~-t~n~~~~p~~~lr~~gi~dFsisP~  184 (561)
T COG5354         107 KNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARV-VGSSLYIHEI-TDNIEEHPFKNLRPVGILDFSISPE  184 (561)
T ss_pred             cCceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhh-ccCeEEEEec-CCccccCchhhccccceeeEEecCC
Confidence             35999999999999888866655  34 67899888877754 3346999997 43332 1111122466888899995


Q ss_pred             C--CEEEE-----ecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEe-----------CCCcEEEEEc
Q psy17610        221 G--TRLLS-----GGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAS-----------TDGTCVLWDL  282 (515)
Q Consensus       221 ~--~~l~~-----~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-----------~d~~i~iwd~  282 (515)
                      +  ..|+.     .+..+++++|.+...+......+.  .-.=..+.|.+.|++++.--           .+..+.++++
T Consensus       185 ~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lf--k~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~  262 (561)
T COG5354         185 GNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLF--KVSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRI  262 (561)
T ss_pred             CCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeE--eecccEEEEecCCceEEEEEEEeeecccceeccceEEEEee
Confidence            3  34443     456789999999644333333332  22224578888888766421           1356888888


Q ss_pred             ccceEEEEEEcCccEEEEEEcCCCcEEEEEE--CCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCC--
Q psy17610        283 IKSTRLIIMILPSMIMSAAYHPSEVQLITCS--TNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGAD--  358 (515)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--  358 (515)
                      ............++|...+|.|.++.+++.+  ....+.++|++.. ....+.  . ..-+.+.|+|.+++++.++-|  
T Consensus       263 ~e~~i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N-l~~~~P--e-~~rNT~~fsp~~r~il~agF~nl  338 (561)
T COG5354         263 TERSIPVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN-LRFYFP--E-QKRNTIFFSPHERYILFAGFDNL  338 (561)
T ss_pred             cccccceeccccccceeeeecccCCceeEEecccccceeecccccc-eEEecC--C-cccccccccCcccEEEEecCCcc
Confidence            7544444445678999999999988877654  5788999998776 333222  2 344568899999999987765  


Q ss_pred             -CeEEEEEccCCeeee-eccCCCCCeeEEEECCCCcEEEEEe------CCCcEEEEeCCCCc
Q psy17610        359 -QIVKMWMYREGVPCF-VGIGHAASITKIKISPDKKVIVSVS------ADGGIFLWTFPELE  412 (515)
Q Consensus       359 -g~i~i~d~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~------~dg~i~iw~~~~~~  412 (515)
                       |.+.+||......+. .+.+.  ..+-+.|+||++++.+..      .|..+.||++....
T Consensus       339 ~gni~i~~~~~rf~~~~~~~~~--n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g~~  398 (561)
T COG5354         339 QGNIEIFDPAGRFKVAGAFNGL--NTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYGAK  398 (561)
T ss_pred             ccceEEeccCCceEEEEEeecC--CceEeeccCCceEEEecCCCcccccCcceEEEEecCch
Confidence             679999987664444 44433  335578999999888764      37789999987643

>KOG2139|consensus

Probab=99.78  E-value=5.3e-16  Score=129.25  Aligned_cols=297  Identities=13%  Similarity=0.149  Sum_probs=190.1

Q ss_pred             CCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEee-ccccCceEEEEEecCCC-EEEEEeCCCcEEEEEcccc-
Q psy17610        209 NRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVL-KEHTSSVSVIQIKSDSK-EAMSASTDGTCVLWDLIKS-  285 (515)
Q Consensus       209 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~-  285 (515)
                      +..+..++|++.-..++++..|-.|++|+-..   .....+ ......|++++|-|.+. .|+.++. +-|.+|..... 
T Consensus        98 ~~dlr~~aWhqH~~~fava~nddvVriy~kss---t~pt~Lks~sQrnvtclawRPlsaselavgCr-~gIciW~~s~tl  173 (445)
T KOG2139|consen   98 EIDLRGVAWHQHIIAFAVATNDDVVRIYDKSS---TCPTKLKSVSQRNVTCLAWRPLSASELAVGCR-AGICIWSDSRTL  173 (445)
T ss_pred             hcceeeEeechhhhhhhhhccCcEEEEeccCC---CCCceecchhhcceeEEEeccCCcceeeeeec-ceeEEEEcCccc
Confidence            34577899999777788999999999999754   222222 23456799999999655 4555555 56999976421 


Q ss_pred             ---e--------EEEEEE--cCccEEEEEEcCCCcEEEEEEC-CCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCE
Q psy17610        286 ---T--------RLIIMI--LPSMIMSAAYHPSEVQLITCST-NKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKY  351 (515)
Q Consensus       286 ---~--------~~~~~~--~~~~~~~~~~~~~~~~l~~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  351 (515)
                         .        ....+.  .+.+|+++.|.+||..+++++. +..|.+||..++..+.-..... +.++-+.|||||.+
T Consensus       174 n~~r~~~~~s~~~~qvl~~pgh~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~gl-gg~slLkwSPdgd~  252 (445)
T KOG2139|consen  174 NANRNIRMMSTHHLQVLQDPGHNPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGL-GGFSLLKWSPDGDV  252 (445)
T ss_pred             ccccccccccccchhheeCCCCceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCC-CceeeEEEcCCCCE
Confidence               1        111222  3357999999999999998776 6789999999987766553333 78889999999999


Q ss_pred             EEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccc--eeeecc-
Q psy17610        352 FLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLS--SKISRS-  428 (515)
Q Consensus       352 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~--~~~~~~-  428 (515)
                      |+++.-|+..++|......-.....-..+.|....|+|+|++|+.... |.-++|.+.-.++.....+...  ...... 
T Consensus       253 lfaAt~davfrlw~e~q~wt~erw~lgsgrvqtacWspcGsfLLf~~s-gsp~lysl~f~~~~~~~~~~~~~k~~lliaD  331 (445)
T KOG2139|consen  253 LFAATCDAVFRLWQENQSWTKERWILGSGRVQTACWSPCGSFLLFACS-GSPRLYSLTFDGEDSVFLRPQSIKRVLLIAD  331 (445)
T ss_pred             EEEecccceeeeehhcccceecceeccCCceeeeeecCCCCEEEEEEc-CCceEEEEeecCCCccccCcccceeeeeecc
Confidence            999999999999965443222222334458999999999987765543 3455666554332222111100  000000 


Q ss_pred             -cccccceeeecCcccEEEeeeccCCcEEEEeecCCe--------EEEEecCCCeeeee-----ecccccceEEEEEEcC
Q psy17610        429 -TARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKM--------IDYWETCDGSIIRS-----LEGSDVAAVNCVDFVD  494 (515)
Q Consensus       429 -~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~--------v~iwd~~~~~~~~~-----~~~~~~~~v~~~~~s~  494 (515)
                       .............+.+.+++|.|.|.+||+.-..+.        |.+||....-.+.-     ..+.   ....++|+|
T Consensus       332 L~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~~~v~~~k~~i~~fdtr~sp~vels~cg~i~ge---~P~~IsF~p  408 (445)
T KOG2139|consen  332 LQEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQSFVLLCKLHISRFDTRKSPPVELSYCGMIGGE---YPAYISFGP  408 (445)
T ss_pred             chhhhhhcCcccccCccceeeECCCCCEEEEEEcCCchhhhhhhhhhhhcccccCceEEEecccccCC---CCceEEeee
Confidence             000000001112456889999999999998875543        66777654322211     1222   234456655


Q ss_pred             ---CCcEEEEeecCCeEEEEEEe
Q psy17610        495 ---DGKYFLTGGADQIVKICLYI  514 (515)
Q Consensus       495 ---~~~~l~s~~~dg~v~iw~~~  514 (515)
                         ++.+|..+=.-|.+.-|.+.
T Consensus       409 l~n~g~lLsiaWsTGriq~ypl~  431 (445)
T KOG2139|consen  409 LKNEGRLLSIAWSTGRIQRYPLT  431 (445)
T ss_pred             cccCCcEEEEEeccCceEeeeeE
Confidence               56677767677877777653

>KOG1272|consensus

Probab=99.77  E-value=1.3e-18  Score=149.15  Aligned_cols=273  Identities=15%  Similarity=0.161  Sum_probs=214.2

Q ss_pred             eEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeE
Q psy17610        167 MICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQ  246 (515)
Q Consensus       167 ~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~  246 (515)
                      .....+.++.+|++|+.|+..|.+..+|..++++...+  .-...|.++.|..+.+++|++-. ..+.|||-   .+..+
T Consensus       130 FGPY~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei--~v~Etv~Dv~~LHneq~~AVAQK-~y~yvYD~---~GtEl  203 (545)
T KOG1272|consen  130 FGPYHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEI--NVMETVRDVTFLHNEQFFAVAQK-KYVYVYDN---NGTEL  203 (545)
T ss_pred             cCCeeeeecCCccEEEecCCccceeeeecccceeeeee--ehhhhhhhhhhhcchHHHHhhhh-ceEEEecC---CCcEE
Confidence            34467889999999999999999999999999998887  45677899999988888887654 68999994   45555


Q ss_pred             EeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC-ccEEEEEEcCCCcEEEEEECCCeEEEEeCCC
Q psy17610        247 CVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP-SMIMSAAYHPSEVQLITCSTNKMIDYWETCD  325 (515)
Q Consensus       247 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~  325 (515)
                      +.+..| ..|..+.|-|.--+|++++..|.++.-|+.+++.+..+... +.+..+.-+|-+..+-+|..+|++.+|....
T Consensus       204 HClk~~-~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~s  282 (545)
T KOG1272|consen  204 HCLKRH-IRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNS  282 (545)
T ss_pred             eehhhc-CchhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCCCC
Confidence            566655 46888999999888999999999999999999988877655 4678888999999999999999999999999


Q ss_pred             CceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEE
Q psy17610        326 GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFL  405 (515)
Q Consensus       326 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i  405 (515)
                      .+++..+..|. ++|.++++.++|+|+++.+.|..++|||++....+.++.. ..+...+++|..| +|| ++....+.+
T Consensus       283 kePLvKiLcH~-g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~t-p~~a~~ls~Sqkg-lLA-~~~G~~v~i  358 (545)
T KOG1272|consen  283 KEPLVKILCHR-GPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRT-PHPASNLSLSQKG-LLA-LSYGDHVQI  358 (545)
T ss_pred             cchHHHHHhcC-CCcceEEECCCCcEEeecccccceeEeeeccccccceeec-CCCcccccccccc-cee-eecCCeeee
Confidence            99999998887 9999999999999999999999999999998776665544 4566788888665 344 445568999


Q ss_pred             EeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeE
Q psy17610        406 WTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMI  465 (515)
Q Consensus       406 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v  465 (515)
                      |.=........               ...-........|..+.|.|-...|-.|...|--
T Consensus       359 w~d~~~~s~~~---------------~~pYm~H~~~~~V~~l~FcP~EDvLGIGH~~G~t  403 (545)
T KOG1272|consen  359 WKDALKGSGHG---------------ETPYMNHRCGGPVEDLRFCPYEDVLGIGHAGGIT  403 (545)
T ss_pred             ehhhhcCCCCC---------------CcchhhhccCcccccceeccHHHeeeccccCCce
Confidence            95322110000               0011111123468889999988777777665543

>KOG0974|consensus

Probab=99.77  E-value=5.6e-15  Score=139.83  Aligned_cols=191  Identities=16%  Similarity=0.197  Sum_probs=149.1

Q ss_pred             CCCceEEEecCCCCeEEEEcCCCCCCcccccccceEEeeccccccccccccccccccCcceeeeccceEEEEEecCCCcE
Q psy17610          5 PNDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMGCYGKLIKKKVSTKLKDVNAEDVSLYSAGVTALYLLKDDSGI   84 (515)
Q Consensus         5 ~~~~~~~~g~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v   84 (515)
                      .++..++.++.+..+.+||......+......+...+..+                                        
T Consensus        97 ~e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~~l~~~----------------------------------------  136 (967)
T KOG0974|consen   97 EENKKIALVTSRNSLLIRDSKNSSVLSKIQSDERCTLYSS----------------------------------------  136 (967)
T ss_pred             hhcceEEEEEcCceEEEEecccCceehhcCCCceEEEEeE----------------------------------------
Confidence            4455677777777777777666554444443333332222                                        


Q ss_pred             EEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeE-EEE
Q psy17610         85 SSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELL-RIS  163 (515)
Q Consensus        85 ~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~-~~~  163 (515)
                      .-+.++++.-++++|+.-+.|.+|+... ......+.+|.+.|.++.|+.||.++++.+.|.++++|++++.+... ..-
T Consensus       137 ~~~g~s~~~~~i~~gsv~~~iivW~~~~-dn~p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~f  215 (967)
T KOG0974|consen  137 LIIGDSAEELYIASGSVFGEIIVWKPHE-DNKPIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGF  215 (967)
T ss_pred             EEEeccCcEEEEEeccccccEEEEeccc-cCCcceecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccc
Confidence            1234566677899999999999999984 33333678899999999999999999999999999999999988776 667


Q ss_pred             ecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCC-CCCeEEEEEcCCCCEEEEecCCCcEEEEEccC
Q psy17610        164 VMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAH-NRGVTALAITQDGTRLLSGGGEGQVRIWKLTR  240 (515)
Q Consensus       164 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~  240 (515)
                      +|...+..+.|.|+  .+++++.|.+.++|+.+. +....+ ..| ...+..++..++...+++++.|+.+++|++..
T Consensus       216 gHsaRvw~~~~~~n--~i~t~gedctcrvW~~~~-~~l~~y-~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~  289 (967)
T KOG0974|consen  216 GHSARVWACCFLPN--RIITVGEDCTCRVWGVNG-TQLEVY-DEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNG  289 (967)
T ss_pred             cccceeEEEEeccc--eeEEeccceEEEEEeccc-ceehhh-hhhhhcceeEEEEcCCceEEEeeccCcchhhhhhhc
Confidence            89999999999998  899999999999997554 334355 455 45699999999999999999999999999853

>KOG1912|consensus

Probab=99.77  E-value=9.8e-16  Score=140.15  Aligned_cols=409  Identities=10%  Similarity=0.076  Sum_probs=271.2

Q ss_pred             CCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCC-----------cE-EEEEecCCcE
Q psy17610         81 DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNF-----------SS-VFATCSKNDI  148 (515)
Q Consensus        81 ~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~-----------~~-l~~~~~d~~i  148 (515)
                      ...-.++.|+|.| ++|.|+.. .|.+.|..+ .+......-|+..|+.+.|.|..           .. |+++.-.|.|
T Consensus        15 ~sN~~A~Dw~~~G-LiAygshs-lV~VVDs~s-~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrI   91 (1062)
T KOG1912|consen   15 RSNRNAADWSPSG-LIAYGSHS-LVSVVDSRS-LQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRI   91 (1062)
T ss_pred             cccccccccCccc-eEEEecCc-eEEEEehhh-hhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcE
Confidence            3446788999877 57777655 799999888 45555566699999999997631           12 3333337999


Q ss_pred             EEEeCCCCceeEEEEecCeEEEEEEEeeC---C-CEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcC-CCCE
Q psy17610        149 RIWSVRTLNELLRISVMNMICACIVFTYD---G-KAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQ-DGTR  223 (515)
Q Consensus       149 ~iw~~~~~~~~~~~~~~~~~v~~~~~~~~---~-~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~  223 (515)
                      .+||...+..+..+..+..++..++|-+.   . ..|++-.....+.+|+..+|+...... .......|+.+.| |.+.
T Consensus        92 il~d~~~~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~-ys~~iLs~f~~DPfd~rh  170 (1062)
T KOG1912|consen   92 ILVDFVLASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYD-YSHEILSCFRVDPFDSRH  170 (1062)
T ss_pred             EEEEehhhhhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccc-cCCcceeeeeeCCCCcce
Confidence            99999999888889999999999999773   3 467777778899999999999988873 4445677899999 6677


Q ss_pred             EEEecCCCcEEEEEccCCc-----eeeEEeeccccC-------------------------ceEEEEEecCCCEEEEEeC
Q psy17610        224 LLSGGGEGQVRIWKLTRES-----QSLQCVLKEHTS-------------------------SVSVIQIKSDSKEAMSAST  273 (515)
Q Consensus       224 l~~~~~d~~i~iw~~~~~~-----~~~~~~~~~~~~-------------------------~v~~~~~~~~~~~l~~~~~  273 (515)
                      +..-+..|.+.+-+.-..+     ++..+....|.+                         ....++|+|.-+.++....
T Consensus       171 ~~~l~s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~lfi~~  250 (1062)
T KOG1912|consen  171 FCVLGSKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNILFITF  250 (1062)
T ss_pred             EEEEccCceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhceEEEEe
Confidence            7766667777776653111     111221122211                         0123456777666777777


Q ss_pred             CCcEEEEEcccceEEEEEEcCc-cEEEEEEcCC--CcEEEEEECCCeEEEEeCCCCc----------------eEEEEec
Q psy17610        274 DGTCVLWDLIKSTRLIIMILPS-MIMSAAYHPS--EVQLITCSTNKMIDYWETCDGS----------------IIRSLEG  334 (515)
Q Consensus       274 d~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~--~~~l~~~~~~~~i~~~d~~~~~----------------~~~~~~~  334 (515)
                      ...+.++|++-..++.....+. .+.-+.+-|+  ...|++...||.+.+|-.+...                +...+..
T Consensus       251 prellv~dle~~~~l~vvpier~~akfv~vlP~~~rd~LfclH~nG~ltirvrk~~~~~f~~~~~~l~~dl~~Q~~~vr~  330 (1062)
T KOG1912|consen  251 PRELLVFDLEYECCLAVVPIERGGAKFVDVLPDPRRDALFCLHSNGRLTIRVRKEEPTEFKKPNASLSMDLGEQVHVVRP  330 (1062)
T ss_pred             ccceEEEcchhhceeEEEEeccCCcceeEeccCCCcceEEEEecCCeEEEEEeeccCccccccchhhccccccceEEEee
Confidence            7889999999888888776664 3444555554  5678999999999999755421                1111111


Q ss_pred             CCCccEEEEEEcCC-CCEEEEEcCCCeEEEEEccCCeeeee-------------------------------ccCCCCCe
Q psy17610        335 SDVAAVNCVDFVDD-GKYFLTGGADQIVKMWMYREGVPCFV-------------------------------GIGHAASI  382 (515)
Q Consensus       335 ~~~~~i~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~-------------------------------~~~~~~~i  382 (515)
                      -....+......|. ...++.--.+|.+.+|.+.+++.-..                               -.+|....
T Consensus       331 m~~~rp~~~~~cPs~~sa~avl~s~g~~~~w~l~~~ri~~~~~s~~iel~~pf~f~~~~~~v~k~~l~~LS~dg~h~sGs  410 (1062)
T KOG1912|consen  331 MEEFRPVIGASCPSTPSALAVLYSSGDSTFWQLSNGRIHLDYRSSSIELVLPFDFNLSTKLVGKTSLISLSDDGSHSSGS  410 (1062)
T ss_pred             chhcccceeecCCCChhhhhhhhhcchhHHHhhhcCCcCcccccccccccccccccCceeehhhccccchhhcCCCCCCc
Confidence            11112222233343 33444445567777887764421100                               01344444


Q ss_pred             eEEEECC-----------CC-------cEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccE
Q psy17610        383 TKIKISP-----------DK-------KVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMI  444 (515)
Q Consensus       383 ~~~~~~~-----------~~-------~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  444 (515)
                      ++....|           -+       .++|.|...|+|.++|+.+...                    ...+..|++.|
T Consensus       411 ~~~~~~p~p~~t~~~~~p~~n~~~~~~pLvAvGT~sGTV~vvdvst~~v--------------------~~~fsvht~~V  470 (1062)
T KOG1912|consen  411 TCVRMRPMPELTKVENDPGGNTPAGTVPLVAVGTNSGTVDVVDVSTNAV--------------------AASFSVHTSLV  470 (1062)
T ss_pred             eeeecccCcccceeecCCCCCccceeeeeEEeecCCceEEEEEecchhh--------------------hhhhcccccce
Confidence            4444333           11       3678899999999999876531                    12233466678


Q ss_pred             EEeeeccCCcEEEEe---------ecCCeEEEEecCCCe--eeeeecccccceEEEEEEcCCCcEEEEeecCCeEEEEEE
Q psy17610        445 MSAAYHPSEVQLITC---------STNKMIDYWETCDGS--IIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLY  513 (515)
Q Consensus       445 ~~~~~s~~~~~l~~~---------~~dg~v~iwd~~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~  513 (515)
                      .++.|-...+++-.+         ..-+.+.+-|+.+|.  ..+.+++....+|..+..|..|+||+..-.|.-+-+||+
T Consensus       471 kgleW~g~sslvSfsys~~n~~sg~vrN~l~vtdLrtGlsk~fR~l~~~despI~~irvS~~~~yLai~Fr~~plEiwd~  550 (1062)
T KOG1912|consen  471 KGLEWLGNSSLVSFSYSHVNSASGGVRNDLVVTDLRTGLSKRFRGLQKPDESPIRAIRVSSSGRYLAILFRREPLEIWDL  550 (1062)
T ss_pred             eeeeeccceeEEEeeeccccccccceeeeEEEEEcccccccccccCCCCCcCcceeeeecccCceEEEEecccchHHHhh
Confidence            888887666554333         223457788998884  445556666699999999999999999999999999985

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=99.76  E-value=4.3e-13  Score=116.33  Aligned_cols=316  Identities=13%  Similarity=0.114  Sum_probs=209.3

Q ss_pred             EEEEEecCCCcEEEEEEecCCCEEEEE-------ecCceEEEEECCCCceeEEeeccCccCeEEEE-eCCCCcEEEEEec
Q psy17610         73 TALYLLKDDSGISSLQYNPVNNKVFVG-------TVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQ-FPVNFSSVFATCS  144 (515)
Q Consensus        73 ~~~~~~~~~~~v~~~~~s~~~~~l~~~-------~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~-~~~~~~~l~~~~~  144 (515)
                      +..++..|-+-|+.-.|+|+|+.+|..       ...+.+.+.+.++|+..+.++-|  ..-+.++ |.|||+.++++..
T Consensus        70 ~~~ritS~lGVvnn~kf~pdGrkvaf~rv~~~ss~~taDly~v~~e~Ge~kRiTyfG--r~fT~VaG~~~dg~iiV~TD~  147 (668)
T COG4946          70 KPLRITSGLGVVNNPKFSPDGRKVAFSRVMLGSSLQTADLYVVPSEDGEAKRITYFG--RRFTRVAGWIPDGEIIVSTDF  147 (668)
T ss_pred             CeeEEecccceeccccCCCCCcEEEEEEEEecCCCccccEEEEeCCCCcEEEEEEec--cccceeeccCCCCCEEEEecc
Confidence            456777788999999999999998872       23466999999998766665543  3344444 8888877665532


Q ss_pred             ---------------C-------------------CcEEE----EeCC-----------------C-Cce---e------
Q psy17610        145 ---------------K-------------------NDIRI----WSVR-----------------T-LNE---L------  159 (515)
Q Consensus       145 ---------------d-------------------~~i~i----w~~~-----------------~-~~~---~------  159 (515)
                                     |                   |.+.|    +|+.                 . ++.   .      
T Consensus       148 ~tPF~q~~~lYkv~~dg~~~e~LnlGpathiv~~dg~ivigRntydLP~WK~YkGGtrGklWis~d~g~tFeK~vdl~~~  227 (668)
T COG4946         148 HTPFSQWTELYKVNVDGIKTEPLNLGPATHIVIKDGIIVIGRNTYDLPHWKGYKGGTRGKLWISSDGGKTFEKFVDLDGN  227 (668)
T ss_pred             CCCcccceeeeEEccCCceeeeccCCceeeEEEeCCEEEEccCcccCcccccccCCccceEEEEecCCcceeeeeecCCC
Confidence                           1                   11111    0110                 0 000   0      


Q ss_pred             -----------EEEEecC--eEEEEEEE-------------------eeCCCEEEEEeCCCeEEEEecCCCceEEEecC-
Q psy17610        160 -----------LRISVMN--MICACIVF-------------------TYDGKAILSGWNDGFIRCFTPQSGKLKFIIPN-  206 (515)
Q Consensus       160 -----------~~~~~~~--~~v~~~~~-------------------~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~-  206 (515)
                                 .-+..|.  +.+.++.+                   +.||+.++. +..|.|.+||.++.+....-.. 
T Consensus       228 vS~PmIV~~RvYFlsD~eG~GnlYSvdldGkDlrrHTnFtdYY~R~~nsDGkrIvF-q~~GdIylydP~td~lekldI~l  306 (668)
T COG4946         228 VSSPMIVGERVYFLSDHEGVGNLYSVDLDGKDLRRHTNFTDYYPRNANSDGKRIVF-QNAGDIYLYDPETDSLEKLDIGL  306 (668)
T ss_pred             cCCceEEcceEEEEecccCccceEEeccCCchhhhcCCchhccccccCCCCcEEEE-ecCCcEEEeCCCcCcceeeecCC
Confidence                       0011111  11222222                   225555554 3457799999887654332111 


Q ss_pred             CC----C-----CCeEEEE-EcC-CCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCC
Q psy17610        207 AH----N-----RGVTALA-ITQ-DGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDG  275 (515)
Q Consensus       207 ~~----~-----~~v~~~~-~~~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~  275 (515)
                      +.    .     .+..-+. |++ +|.+++..+. |...+.+...  ...  ..-+|...|.-..+..+++-++.|..||
T Consensus       307 pl~rk~k~~k~~~pskyledfa~~~Gd~ia~VSR-GkaFi~~~~~--~~~--iqv~~~~~VrY~r~~~~~e~~vigt~dg  381 (668)
T COG4946         307 PLDRKKKQPKFVNPSKYLEDFAVVNGDYIALVSR-GKAFIMRPWD--GYS--IQVGKKGGVRYRRIQVDPEGDVIGTNDG  381 (668)
T ss_pred             ccccccccccccCHHHhhhhhccCCCcEEEEEec-CcEEEECCCC--Cee--EEcCCCCceEEEEEccCCcceEEeccCC
Confidence            00    0     1111111 343 6788888876 6777776531  111  2235677788888888888899999998


Q ss_pred             -cEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEE
Q psy17610        276 -TCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLT  354 (515)
Q Consensus       276 -~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~  354 (515)
                       .+-++|..+++.......-+.|.++..+|+|+.++++.....+.++|+.++..... .....+-|+.++|+|+++++|-
T Consensus       382 D~l~iyd~~~~e~kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididngnv~~i-dkS~~~lItdf~~~~nsr~iAY  460 (668)
T COG4946         382 DKLGIYDKDGGEVKRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRLI-DKSEYGLITDFDWHPNSRWIAY  460 (668)
T ss_pred             ceEEEEecCCceEEEeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeEe-cccccceeEEEEEcCCceeEEE
Confidence             89999999998888777778999999999999999999999999999999876443 3334488999999999999998


Q ss_pred             EcCCC----eEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEe
Q psy17610        355 GGADQ----IVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVS  398 (515)
Q Consensus       355 ~~~dg----~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~  398 (515)
                      +--+|    .|+++|+.+++....- ...+.=.+-+|.||+++|.--+
T Consensus       461 afP~gy~tq~Iklydm~~~Kiy~vT-T~ta~DfsPaFD~d~ryLYfLs  507 (668)
T COG4946         461 AFPEGYYTQSIKLYDMDGGKIYDVT-TPTAYDFSPAFDPDGRYLYFLS  507 (668)
T ss_pred             ecCcceeeeeEEEEecCCCeEEEec-CCcccccCcccCCCCcEEEEEe
Confidence            87665    6899999887665443 2233345678999999887654

>KOG2315|consensus

Probab=99.76  E-value=1.3e-14  Score=128.30  Aligned_cols=337  Identities=12%  Similarity=0.186  Sum_probs=218.3

Q ss_pred             cCCcEEEEeCCCCceeEEEEec---CeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCC
Q psy17610        144 SKNDIRIWSVRTLNELLRISVM---NMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQD  220 (515)
Q Consensus       144 ~d~~i~iw~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  220 (515)
                      +.-.+.+|+............+   ..++...+++++|++++.+ .+..++|++..++..+.+..  .. .+.++.|+|.
T Consensus         9 sSe~~~l~~~~~~~~~~~~f~~~~~~~~~~v~~~S~~G~lfA~~-~~~~v~i~~~~~~~~~lt~~--~~-~~~~L~fSP~   84 (566)
T KOG2315|consen    9 SSEGFYLFNGPGSKDAVTVFEQNKTSRPCNVFAYSNNGRLFAYS-DNQVVKVFEIATLKVVLCVE--LK-KTYDLLFSPK   84 (566)
T ss_pred             ccceeEEeccCCccccccccccCCCCCcceeEEEcCCCcEEEEE-cCCeEEEEEccCCcEEEEec--cc-eeeeeeeccc
Confidence            3345777776543322222222   3446778899999877765 56679999998886554442  22 7899999999


Q ss_pred             CCEEEEe-----c-----CCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEE
Q psy17610        221 GTRLLSG-----G-----GEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLII  290 (515)
Q Consensus       221 ~~~l~~~-----~-----~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~  290 (515)
                      |.+|.+=     .     ..-.+.+|+..+  ......+......-++..|++|..+.+- -..+.+.+|++.+.+....
T Consensus        85 g~yL~T~e~~~i~~~~~~~~pn~~v~~vet--~~~~s~~q~k~Q~~W~~qfs~dEsl~ar-lv~nev~f~~~~~f~~~~~  161 (566)
T KOG2315|consen   85 GNYLLTWEPWAIYGPKNASNPNVLVYNVET--GVQRSQIQKKMQNGWVPQFSIDESLAAR-LVSNEVQFYDLGSFKTIQH  161 (566)
T ss_pred             ccccccccccccccCCCCCCCceeeeeecc--ceehhheehhhhcCcccccccchhhhhh-hhcceEEEEecCCccceee
Confidence            9988752     1     124577999864  2222222222222257888888664332 2345799999988666666


Q ss_pred             EEcCccEEEEEEcCCC-cE-EEE-----EECCCeEEEEeCCCCceEEEEec--CCCccEEEEEEcCCCCEEE-EEcC---
Q psy17610        291 MILPSMIMSAAYHPSE-VQ-LIT-----CSTNKMIDYWETCDGSIIRSLEG--SDVAAVNCVDFVDDGKYFL-TGGA---  357 (515)
Q Consensus       291 ~~~~~~~~~~~~~~~~-~~-l~~-----~~~~~~i~~~d~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~-~~~~---  357 (515)
                      ..+...+..+.++|.. .. +++     .+.-+.+++|.......-..+..  .....--.+.|++-|.-|+ ..+.   
T Consensus       162 kl~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~~~a~ksFFkadkvqm~WN~~gt~LLvLastdVD  241 (566)
T KOG2315|consen  162 KLSVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQHQPVANKSFFKADKVQMKWNKLGTALLVLASTDVD  241 (566)
T ss_pred             eeeccceeeEEecCCCCCceEEEEccCCCCCCcEEEEeccccccccchhhhccccccceeEEEeccCCceEEEEEEEeec
Confidence            6667788889999873 33 332     23456799998763322111111  1112223567877665332 2211   


Q ss_pred             --------CCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEE--eCCCcEEEEeCCCCcCccCCCcccceeeec
Q psy17610        358 --------DQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSV--SADGGIFLWTFPELEDDVGDSRSLSSKISR  427 (515)
Q Consensus       358 --------dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~--~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~  427 (515)
                              +..+++.+++ |.....-....++|.++.|+|+++-++++  -.--.+.|+|++-.                
T Consensus       242 ktn~SYYGEq~Lyll~t~-g~s~~V~L~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~~----------------  304 (566)
T KOG2315|consen  242 KTNASYYGEQTLYLLATQ-GESVSVPLLKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRGK----------------  304 (566)
T ss_pred             CCCccccccceEEEEEec-CceEEEecCCCCCceEEEECCCCCEEEEEEecccceEEEEcCCCC----------------
Confidence                    3468888887 33333333457999999999999876654  34567888887542                


Q ss_pred             ccccccceeeecCcccEEEeeeccCCcEEEEeec---CCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeec
Q psy17610        428 STARSTRLIIMILPSMIMSAAYHPSEVQLITCST---NKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA  504 (515)
Q Consensus       428 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~---dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~  504 (515)
                             ......+++-+.+-|+|.|++++.++-   .|.|.+||+.+.+++..+....   -+-+.|+|||++++|+..
T Consensus       305 -------~v~df~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a~~---tt~~eW~PdGe~flTATT  374 (566)
T KOG2315|consen  305 -------PVFDFPEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKAAN---TTVFEWSPDGEYFLTATT  374 (566)
T ss_pred             -------EeEeCCCCCccceEECCCCCEEEEeecCCCCCceEEEeccchhhccccccCC---ceEEEEcCCCcEEEEEec
Confidence                   122223345678899999999887764   4889999999999998888753   456799999999999865


Q ss_pred             ------CCeEEEEEEe
Q psy17610        505 ------DQIVKICLYI  514 (515)
Q Consensus       505 ------dg~v~iw~~~  514 (515)
                            |+.++||+|.
T Consensus       375 aPRlrvdNg~Kiwhyt  390 (566)
T KOG2315|consen  375 APRLRVDNGIKIWHYT  390 (566)
T ss_pred             cccEEecCCeEEEEec
Confidence                  7889999983

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=99.75  E-value=9e-14  Score=126.11  Aligned_cols=296  Identities=16%  Similarity=0.217  Sum_probs=191.7

Q ss_pred             EEEEeCC----CeEEEEec--CCCceEEEecCCCCCCeEEEEEcCCCCEEEEecC----CCcEEEEEccCC--ceeeEEe
Q psy17610        181 ILSGWND----GFIRCFTP--QSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGG----EGQVRIWKLTRE--SQSLQCV  248 (515)
Q Consensus       181 l~~~~~d----g~i~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~i~iw~~~~~--~~~~~~~  248 (515)
                      +++|+..    +.|.+|++  ++++....-..........++++|++++|.+..+    ++.|..|++...  ....+..
T Consensus         2 ~~vgsy~~~~~~gI~~~~~d~~~g~l~~~~~~~~~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~   81 (345)
T PF10282_consen    2 LYVGSYTNGKGGGIYVFRFDEETGTLTLVQTVAEGENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNS   81 (345)
T ss_dssp             EEEEECCSSSSTEEEEEEEETTTTEEEEEEEEEESSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEE
T ss_pred             EEEEcCCCCCCCcEEEEEEcCCCCCceEeeeecCCCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeee
Confidence            4455554    67888877  5555433221234455678899999999998866    579999998754  3333444


Q ss_pred             eccccCceEEEEEecCCCEEEEEeC-CCcEEEEEccc-ceEEEE---EE-----------cCccEEEEEEcCCCcEEEEE
Q psy17610        249 LKEHTSSVSVIQIKSDSKEAMSAST-DGTCVLWDLIK-STRLII---MI-----------LPSMIMSAAYHPSEVQLITC  312 (515)
Q Consensus       249 ~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iwd~~~-~~~~~~---~~-----------~~~~~~~~~~~~~~~~l~~~  312 (515)
                      ..........++++|++++++++.. +|.+.++++.. +.....   ..           ......++.++|+++++++.
T Consensus        82 ~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~  161 (345)
T PF10282_consen   82 VPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVP  161 (345)
T ss_dssp             EEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEE
T ss_pred             eccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEE
Confidence            4434455567999999999998875 89999999976 332222   21           12347899999999998886


Q ss_pred             EC-CCeEEEEeCCCCc--e--EEEEecCCCccEEEEEEcCCCCEEEEEc-CCCeEEEEEcc--CCe--eeeecc----C-
Q psy17610        313 ST-NKMIDYWETCDGS--I--IRSLEGSDVAAVNCVDFVDDGKYFLTGG-ADQIVKMWMYR--EGV--PCFVGI----G-  377 (515)
Q Consensus       313 ~~-~~~i~~~d~~~~~--~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~--~~~--~~~~~~----~-  377 (515)
                      .. ...|.+|++....  .  ...+..+.....+.++|+|+++++++.. .++.|.++++.  ++.  .+....    + 
T Consensus       162 dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~  241 (345)
T PF10282_consen  162 DLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGF  241 (345)
T ss_dssp             ETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTS
T ss_pred             ecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccc
Confidence            55 5689999987654  3  2344555557889999999999886665 47789999988  332  222221    1 


Q ss_pred             -CCCCeeEEEECCCCcEEEEEeC-CCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcE
Q psy17610        378 -HAASITKIKISPDKKVIVSVSA-DGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQ  455 (515)
Q Consensus       378 -~~~~i~~~~~~~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~  455 (515)
                       .......++++||+++|.++.. ++.|.+|++..........                ..........+.++++|+|++
T Consensus       242 ~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~----------------~~~~~~G~~Pr~~~~s~~g~~  305 (345)
T PF10282_consen  242 TGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLV----------------QTVPTGGKFPRHFAFSPDGRY  305 (345)
T ss_dssp             CSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEE----------------EEEEESSSSEEEEEE-TTSSE
T ss_pred             cccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEE----------------EEEeCCCCCccEEEEeCCCCE
Confidence             1225788999999999888764 6689999985432111000                001111234788999999999


Q ss_pred             EEEee-cCCeEEEEec--CCCeeeeeecccccceEEEEEE
Q psy17610        456 LITCS-TNKMIDYWET--CDGSIIRSLEGSDVAAVNCVDF  492 (515)
Q Consensus       456 l~~~~-~dg~v~iwd~--~~~~~~~~~~~~~~~~v~~~~~  492 (515)
                      |+++. .++.|.+|++  ++|.+...-.........|+.|
T Consensus       306 l~Va~~~s~~v~vf~~d~~tG~l~~~~~~~~~~~p~ci~f  345 (345)
T PF10282_consen  306 LYVANQDSNTVSVFDIDPDTGKLTPVGSSVPIPSPVCIVF  345 (345)
T ss_dssp             EEEEETTTTEEEEEEEETTTTEEEEEEEEEESSSEEEEEE
T ss_pred             EEEEecCCCeEEEEEEeCCCCcEEEecccccCCCCEEEeC
Confidence            99887 5568999876  5676654443222255667765

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.75  E-value=1.8e-15  Score=141.00  Aligned_cols=233  Identities=13%  Similarity=0.101  Sum_probs=162.9

Q ss_pred             cEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeC---CCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCE
Q psy17610        147 DIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWN---DGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTR  223 (515)
Q Consensus       147 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  223 (515)
                      .|.+||.+... .+.+..+...+...+|+|||+.|+..+.   +..+.+|++.+++.....  .....+....|+|||+.
T Consensus       180 ~l~~~d~dg~~-~~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~--~~~~~~~~~~~SPDG~~  256 (429)
T PRK03629        180 ELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVA--SFPRHNGAPAFSPDGSK  256 (429)
T ss_pred             eEEEEcCCCCC-CEEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEcc--CCCCCcCCeEECCCCCE
Confidence            68889987543 4445556678899999999999986543   457999999888754432  22333456899999998


Q ss_pred             EEEe-cCCC--cEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCC-C--cEEEEEcccceEEEEEEcCccE
Q psy17610        224 LLSG-GGEG--QVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTD-G--TCVLWDLIKSTRLIIMILPSMI  297 (515)
Q Consensus       224 l~~~-~~d~--~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~--~i~iwd~~~~~~~~~~~~~~~~  297 (515)
                      |+.. +.+|  .|.+||+....  .. .+..+...+....|+|||+.++..+.+ +  .|..+|+.+++...........
T Consensus       257 La~~~~~~g~~~I~~~d~~tg~--~~-~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~~lt~~~~~~  333 (429)
T PRK03629        257 LAFALSKTGSLNLYVMDLASGQ--IR-QVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQRITWEGSQN  333 (429)
T ss_pred             EEEEEcCCCCcEEEEEECCCCC--EE-EccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeEEeecCCCCc
Confidence            8854 4444  58888885433  22 233344567789999999998877764 3  4555567666554433333445


Q ss_pred             EEEEEcCCCcEEEEEECC---CeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCe---EEEEEccCCee
Q psy17610        298 MSAAYHPSEVQLITCSTN---KMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQI---VKMWMYREGVP  371 (515)
Q Consensus       298 ~~~~~~~~~~~l~~~~~~---~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~---i~i~d~~~~~~  371 (515)
                      ....|+|+++.++....+   ..|.+||+.+++.. .+...  .......|+|||++|+..+.++.   +.++++ ++..
T Consensus       334 ~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~-~Lt~~--~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~-~G~~  409 (429)
T PRK03629        334 QDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLTDT--FLDETPSIAPNGTMVIYSSSQGMGSVLNLVST-DGRF  409 (429)
T ss_pred             cCEEECCCCCEEEEEEccCCCceEEEEECCCCCeE-EeCCC--CCCCCceECCCCCEEEEEEcCCCceEEEEEEC-CCCC
Confidence            678899999999876653   35888999887643 33322  22346789999999998887764   677777 4556


Q ss_pred             eeeccCCCCCeeEEEECC
Q psy17610        372 CFVGIGHAASITKIKISP  389 (515)
Q Consensus       372 ~~~~~~~~~~i~~~~~~~  389 (515)
                      ...+..|.+.+...+|+|
T Consensus       410 ~~~l~~~~~~~~~p~Wsp  427 (429)
T PRK03629        410 KARLPATDGQVKFPAWSP  427 (429)
T ss_pred             eEECccCCCCcCCcccCC
Confidence            666778888899999987

>KOG2314|consensus

Probab=99.75  E-value=2.9e-15  Score=131.91  Aligned_cols=316  Identities=12%  Similarity=0.117  Sum_probs=212.3

Q ss_pred             EEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec-----------CCcEEEEeC
Q psy17610         85 SSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS-----------KNDIRIWSV  153 (515)
Q Consensus        85 ~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-----------d~~i~iw~~  153 (515)
                      +-+.|||.|.||++--..| |.+|--++-..+.++.  |.+ |.-+.|||..++|++-+.           ...++|||+
T Consensus       214 tyv~wSP~GTYL~t~Hk~G-I~lWGG~~f~r~~RF~--Hp~-Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI  289 (698)
T KOG2314|consen  214 TYVRWSPKGTYLVTFHKQG-IALWGGESFDRIQRFY--HPG-VQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDI  289 (698)
T ss_pred             eeEEecCCceEEEEEeccc-eeeecCccHHHHHhcc--CCC-ceeeecCCccceEEEecCCccccCcccCCCceEEEEEc
Confidence            5689999999999988776 8899877733333333  654 899999999999999774           156999999


Q ss_pred             CCCceeEEEEecCe---EEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCC
Q psy17610        154 RTLNELLRISVMNM---ICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGE  230 (515)
Q Consensus       154 ~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  230 (515)
                      .+|...+.+.....   .-.-..||.|++++|.-..+ .|.||+..+..++..- .-.-..|....|+|.++.||.=...
T Consensus       290 ~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~~-sisIyEtpsf~lld~K-slki~gIr~FswsP~~~llAYwtpe  367 (698)
T KOG2314|consen  290 ATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTGN-SISIYETPSFMLLDKK-SLKISGIRDFSWSPTSNLLAYWTPE  367 (698)
T ss_pred             cccchhcceeccCCCccccceEEeccCCceeEEeccc-eEEEEecCceeeeccc-ccCCccccCcccCCCcceEEEEccc
Confidence            99999888875322   22357899999999977664 5999987774443322 2345678899999998887754321


Q ss_pred             -----CcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeC----------CCcEEEEEcccc-eEEEEEEcC
Q psy17610        231 -----GQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST----------DGTCVLWDLIKS-TRLIIMILP  294 (515)
Q Consensus       231 -----~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----------d~~i~iwd~~~~-~~~~~~~~~  294 (515)
                           ..+.+-.+  .+...+....-+.-.=..+.|-.+|.+|..--.          -..+.|+.++.. -++......
T Consensus       368 ~~~~parvtL~ev--Ps~~~iRt~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~velk  445 (698)
T KOG2314|consen  368 TNNIPARVTLMEV--PSKREIRTKNLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEVVELK  445 (698)
T ss_pred             ccCCcceEEEEec--CccceeeeccceeeeccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCCceeeecc
Confidence                 23444444  222222222222222234566677777764221          123455555433 345556677


Q ss_pred             ccEEEEEEcCCCcEEEEEEC---CCeEEEEeCCC-C---ceEEEEecCCCccEEEEEEcCCCCEEEEE---cCCCeEEEE
Q psy17610        295 SMIMSAAYHPSEVQLITCST---NKMIDYWETCD-G---SIIRSLEGSDVAAVNCVDFVDDGKYFLTG---GADQIVKMW  364 (515)
Q Consensus       295 ~~~~~~~~~~~~~~l~~~~~---~~~i~~~d~~~-~---~~~~~~~~~~~~~i~~~~~~~~~~~l~~~---~~dg~i~i~  364 (515)
                      ..+...+|.|.|..+++-+.   ..++.+|...+ .   +.+..+..   ...+.+.|+|.|++++++   +..|.+.++
T Consensus       446 e~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~dk---~~~N~vfwsPkG~fvvva~l~s~~g~l~F~  522 (698)
T KOG2314|consen  446 ESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELDK---KFANTVFWSPKGRFVVVAALVSRRGDLEFY  522 (698)
T ss_pred             hheeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhhhhcc---cccceEEEcCCCcEEEEEEecccccceEEE
Confidence            78999999999998877554   35688887763 2   22333332   456789999999998876   457889999


Q ss_pred             EccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeC------CCcEEEEeCCCC
Q psy17610        365 MYREGVPCFVGIGHAASITKIKISPDKKVIVSVSA------DGGIFLWTFPEL  411 (515)
Q Consensus       365 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~------dg~i~iw~~~~~  411 (515)
                      |.........-.......+.+.|.|.|+|+++++.      |..-++|+++..
T Consensus       523 D~~~a~~k~~~~~eh~~at~veWDPtGRYvvT~ss~wrhk~d~GYri~tfqGr  575 (698)
T KOG2314|consen  523 DTDYADLKDTASPEHFAATEVEWDPTGRYVVTSSSSWRHKVDNGYRIFTFQGR  575 (698)
T ss_pred             ecchhhhhhccCccccccccceECCCCCEEEEeeehhhhccccceEEEEeecH
Confidence            98753332222222244678999999999999975      455678877653

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.74  E-value=1.5e-15  Score=141.56  Aligned_cols=236  Identities=14%  Similarity=0.143  Sum_probs=160.7

Q ss_pred             ceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec---CCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCC
Q psy17610        103 CEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS---KNDIRIWSVRTLNELLRISVMNMICACIVFTYDGK  179 (515)
Q Consensus       103 ~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~---d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~  179 (515)
                      ..|.++|.+.. ....+. .+...+.+.+|+|||+.|+..+.   +..+.+|++.+++... +.........+.|+|||+
T Consensus       179 ~~l~~~d~dg~-~~~~lt-~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~-l~~~~~~~~~~~~SPDG~  255 (429)
T PRK03629        179 YELRVSDYDGY-NQFVVH-RSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ-VASFPRHNGAPAFSPDGS  255 (429)
T ss_pred             eeEEEEcCCCC-CCEEee-cCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEE-ccCCCCCcCCeEECCCCC
Confidence            37999998864 333333 36678999999999999987653   4569999998875432 222333445689999999


Q ss_pred             EEEEE-eCCC--eEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCC-CcEEEEEccCCceeeEEeeccccCc
Q psy17610        180 AILSG-WNDG--FIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGE-GQVRIWKLTRESQSLQCVLKEHTSS  255 (515)
Q Consensus       180 ~l~~~-~~dg--~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~~i~iw~~~~~~~~~~~~~~~~~~~  255 (515)
                      .|+.. +.+|  .|.+||+++++.....  .+...+....|+|+|+.|+..+.+ +...+|.++....... .+..+...
T Consensus       256 ~La~~~~~~g~~~I~~~d~~tg~~~~lt--~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~-~lt~~~~~  332 (429)
T PRK03629        256 KLAFALSKTGSLNLYVMDLASGQIRQVT--DGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQ-RITWEGSQ  332 (429)
T ss_pred             EEEEEEcCCCCcEEEEEECCCCCEEEcc--CCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeE-EeecCCCC
Confidence            88865 3344  5889999988765443  344567889999999988766653 4555554332222222 22233344


Q ss_pred             eEEEEEecCCCEEEEEeCC---CcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCe---EEEEeCCCCceE
Q psy17610        256 VSVIQIKSDSKEAMSASTD---GTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKM---IDYWETCDGSII  329 (515)
Q Consensus       256 v~~~~~~~~~~~l~~~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---i~~~d~~~~~~~  329 (515)
                      .....|+|||++++..+.+   ..|.+||+.+++.... ..........|+|||+.++..+.++.   +.++++ +++..
T Consensus       333 ~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~~L-t~~~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~-~G~~~  410 (429)
T PRK03629        333 NQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVL-TDTFLDETPSIAPNGTMVIYSSSQGMGSVLNLVST-DGRFK  410 (429)
T ss_pred             ccCEEECCCCCEEEEEEccCCCceEEEEECCCCCeEEe-CCCCCCCCceECCCCCEEEEEEcCCCceEEEEEEC-CCCCe
Confidence            5678899999999876654   3588899987764433 22333456789999999999887654   667777 45555


Q ss_pred             EEEecCCCccEEEEEEcC
Q psy17610        330 RSLEGSDVAAVNCVDFVD  347 (515)
Q Consensus       330 ~~~~~~~~~~i~~~~~~~  347 (515)
                      ..+..+. +.+...+|+|
T Consensus       411 ~~l~~~~-~~~~~p~Wsp  427 (429)
T PRK03629        411 ARLPATD-GQVKFPAWSP  427 (429)
T ss_pred             EECccCC-CCcCCcccCC
Confidence            6666544 6677788887

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.74  E-value=1.4e-15  Score=142.06  Aligned_cols=237  Identities=12%  Similarity=0.103  Sum_probs=161.6

Q ss_pred             CcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCC---CeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCC
Q psy17610        146 NDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWND---GFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGT  222 (515)
Q Consensus       146 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  222 (515)
                      ..|.++|.+ +...+.+..+...+.+.+|+|||+.|+..+.+   ..|.+||+.+++.....  .....+....|+|||+
T Consensus       176 ~~L~~~D~d-G~~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l~--~~~g~~~~~~~SPDG~  252 (427)
T PRK02889        176 YQLQISDAD-GQNAQSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVVA--NFKGSNSAPAWSPDGR  252 (427)
T ss_pred             cEEEEECCC-CCCceEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEee--cCCCCccceEECCCCC
Confidence            357777764 55555666677788999999999999877643   46999999988765432  2334567889999999


Q ss_pred             EEE-EecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeC-CCcEEEEEc--ccceEEEEEEcCccEE
Q psy17610        223 RLL-SGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST-DGTCVLWDL--IKSTRLIIMILPSMIM  298 (515)
Q Consensus       223 ~l~-~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iwd~--~~~~~~~~~~~~~~~~  298 (515)
                      .|+ +.+.++...+|.++..... ...+..+........|+|||+.++..+. ++...+|.+  .+++............
T Consensus       253 ~la~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~lt~~g~~~~  331 (427)
T PRK02889        253 TLAVALSRDGNSQIYTVNADGSG-LRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQRVTFTGSYNT  331 (427)
T ss_pred             EEEEEEccCCCceEEEEECCCCC-cEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEEEecCCCCcC
Confidence            887 4677888777766433332 2334445555667889999999887664 456666654  4444333322223345


Q ss_pred             EEEEcCCCcEEEEEECCC---eEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCC---eEEEEEccCCeee
Q psy17610        299 SAAYHPSEVQLITCSTNK---MIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQ---IVKMWMYREGVPC  372 (515)
Q Consensus       299 ~~~~~~~~~~l~~~~~~~---~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg---~i~i~d~~~~~~~  372 (515)
                      ...|+|+|++++..+.++   .|.+||+.+++... +...  .......|+|||+.|+..+.++   .+.+.+. .+...
T Consensus       332 ~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~~-lt~~--~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~-~g~~~  407 (427)
T PRK02889        332 SPRISPDGKLLAYISRVGGAFKLYVQDLATGQVTA-LTDT--TRDESPSFAPNGRYILYATQQGGRSVLAAVSS-DGRIK  407 (427)
T ss_pred             ceEECCCCCEEEEEEccCCcEEEEEEECCCCCeEE-ccCC--CCccCceECCCCCEEEEEEecCCCEEEEEEEC-CCCce
Confidence            678999999998776654   69999998877543 3222  2335779999999988876543   3566666 45555


Q ss_pred             eeccCCCCCeeEEEECCC
Q psy17610        373 FVGIGHAASITKIKISPD  390 (515)
Q Consensus       373 ~~~~~~~~~i~~~~~~~~  390 (515)
                      ..+..+.+.+...+|+|-
T Consensus       408 ~~l~~~~g~~~~p~wsp~  425 (427)
T PRK02889        408 QRLSVQGGDVREPSWGPF  425 (427)
T ss_pred             EEeecCCCCCCCCccCCC
Confidence            556566677888888873

>KOG2041|consensus

Probab=99.74  E-value=2.6e-14  Score=129.91  Aligned_cols=424  Identities=9%  Similarity=0.133  Sum_probs=274.7

Q ss_pred             cCCCcEEEEEEecCCCEEEEEecCceEEEEECCCC--------------ceeEEeeccCccCeEEEEeCCCCcEEEEEec
Q psy17610         79 KDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSG--------------FTLTLVNTCHTSAIYDLQFPVNFSSVFATCS  144 (515)
Q Consensus        79 ~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~--------------~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~  144 (515)
                      +......|++|+....++|+|+.||.+++..+.+.              ..+...+.||.+.|.-+.|+.+.+.|-++..
T Consensus        12 PnnvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt   91 (1189)
T KOG2041|consen   12 PNNVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDT   91 (1189)
T ss_pred             CCCceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCC
Confidence            45677899999999999999999999999988652              1223457799999999999998888888888


Q ss_pred             CCcEEEEeCCCCceeEEE--EecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCC
Q psy17610        145 KNDIRIWSVRTLNELLRI--SVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGT  222 (515)
Q Consensus       145 d~~i~iw~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  222 (515)
                      +|.|.+|-+-.|.-....  ......|.+++|..||..++....||.|.+=.++..+....-..+  .....+.|++|.+
T Consensus        92 ~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNRIwgKeLkg--~~l~hv~ws~D~~  169 (1189)
T KOG2041|consen   92 SGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNRIWGKELKG--QLLAHVLWSEDLE  169 (1189)
T ss_pred             CceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccceecchhcch--heccceeecccHH
Confidence            999999998776532221  234567899999999999999999999988887766553322111  2234788999999


Q ss_pred             EEEEecCCCcEEEEEccCCce-----ee-E---EeeccccCceEEEEEe--------cCCCEEEEEeCCCcEEEEEcccc
Q psy17610        223 RLLSGGGEGQVRIWKLTRESQ-----SL-Q---CVLKEHTSSVSVIQIK--------SDSKEAMSASTDGTCVLWDLIKS  285 (515)
Q Consensus       223 ~l~~~~~d~~i~iw~~~~~~~-----~~-~---~~~~~~~~~v~~~~~~--------~~~~~l~~~~~d~~i~iwd~~~~  285 (515)
                      .++.+-.+|.+.++|...+-.     .+ +   ..+......|..+.|.        |+...++.+-..|.+.+..-.+.
T Consensus       170 ~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lavcy~nGr~QiMR~eND  249 (1189)
T KOG2041|consen  170 QALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVCYANGRMQIMRSEND  249 (1189)
T ss_pred             HHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCCEEEEEEcCceehhhhhcCC
Confidence            888899999999999753210     11 0   0111122234555553        57788999999999988877766


Q ss_pred             eEEEEEEcCccEEEEEEcCCCcEEEEEECCC---------eEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEc
Q psy17610        286 TRLIIMILPSMIMSAAYHPSEVQLITCSTNK---------MIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGG  356 (515)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---------~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~  356 (515)
                      .....+..+-.+..+.|+++|..|++++.+.         .|.+|. .-|+.+.+++.+. ..|+.++|-..|-.++.+-
T Consensus       250 ~~Pvv~dtgm~~vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fys-p~G~i~gtlkvpg-~~It~lsWEg~gLriA~Av  327 (1189)
T KOG2041|consen  250 PEPVVVDTGMKIVGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFYS-PYGHIVGTLKVPG-SCITGLSWEGTGLRIAIAV  327 (1189)
T ss_pred             CCCeEEecccEeecceecCCCcEEEEccCcccccCccccceEEEec-cchhheEEEecCC-ceeeeeEEcCCceEEEEEe
Confidence            6666677778899999999999999987642         455554 4677778887776 7888888877665444332


Q ss_pred             CCC--------------------------------eEEEEEccCCeeeee----------cc-----------CC-----
Q psy17610        357 ADQ--------------------------------IVKMWMYREGVPCFV----------GI-----------GH-----  378 (515)
Q Consensus       357 ~dg--------------------------------~i~i~d~~~~~~~~~----------~~-----------~~-----  378 (515)
                       |+                                .|.+||..+.+....          ..           +|     
T Consensus       328 -dsfiyfanIRP~ykWgy~e~TvVy~y~~~e~p~y~i~Fwdtk~nek~vK~V~~~~~~a~~~ehCvL~~~~d~~~i~e~s  406 (1189)
T KOG2041|consen  328 -DSFIYFANIRPEYKWGYIEETVVYVYQKEELPQYGIMFWDTKTNEKTVKTVTHFENMAFYREHCVLINRQDDGVIPEYS  406 (1189)
T ss_pred             -cceEEEEeecccceEEEeeeEEEEEEccCCCcceEEEEEecccChhhhhhhcceeehheecccEEEEeccccCCCcchh
Confidence             22                                244555544321100          00           00     


Q ss_pred             ----CCCeeEEEEC--------------------CCCcEEEEEeCCCcEEEEeCCCCcCccCCCc-------ccce----
Q psy17610        379 ----AASITKIKIS--------------------PDKKVIVSVSADGGIFLWTFPELEDDVGDSR-------SLSS----  423 (515)
Q Consensus       379 ----~~~i~~~~~~--------------------~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-------~~~~----  423 (515)
                          .+.+..+...                    -++.+++.+|.+ .+.+|.....+.......       ....    
T Consensus       407 ~le~~~~~~~l~LCNSIGT~lD~kytdirP~Fv~vn~~~vviAS~e-~~~iWhy~~pK~~s~l~~~k~rkegr~h~Ddtp  485 (1189)
T KOG2041|consen  407 TLENRSRVYFLQLCNSIGTSLDYKYTDIRPKFVCVNGICVVIASEE-RYFIWHYVLPKFNSVLAGVKIRKEGRFHGDDTP  485 (1189)
T ss_pred             hhhcccceEEEeeecccCCcCCCCcceeeeeEEEecceEEEEeccc-cEEEEEEeccchhhhhhhhhhcccccccCCCCc
Confidence                0111111110                    134455556555 678887654332111000       0000    


Q ss_pred             -eeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEe
Q psy17610        424 -KISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTG  502 (515)
Q Consensus       424 -~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~  502 (515)
                       ...............+...+|.+++.+  .++|..+-..|.|+-|.+.+..+.....-.  ..+..+..+-+...++.-
T Consensus       486 ~ga~d~~l~ys~kt~~G~~DpICAl~~s--dk~l~vareSG~I~rySl~nv~l~n~y~~n--~~~y~~~lNCnstRlAiI  561 (1189)
T KOG2041|consen  486 EGAQDRTLEYSTKTLLGSKDPICALCIS--DKFLMVARESGGIYRYSLNNVVLTNSYPVN--PSIYSIKLNCNSTRLAII  561 (1189)
T ss_pred             cchhhceeeccceeeccCCCcceeeeec--ceEEEEEeccCceEEEEecceeeeeccccC--chheeEeeccCcchhhhh
Confidence             000000011122344556778888776  568889999999999999888776665543  466777776666656555


Q ss_pred             ecCCeEEEEE
Q psy17610        503 GADQIVKICL  512 (515)
Q Consensus       503 ~~dg~v~iw~  512 (515)
                      .--|.+.+.|
T Consensus       562 d~~gv~tf~d  571 (1189)
T KOG2041|consen  562 DLVGVVTFQD  571 (1189)
T ss_pred             hhhceeeeee
Confidence            5555554444

>KOG1310|consensus

Probab=99.73  E-value=4.6e-17  Score=142.80  Aligned_cols=214  Identities=17%  Similarity=0.221  Sum_probs=165.4

Q ss_pred             eeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcC--CCCEEEEecCCCcEEE
Q psy17610        158 ELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQ--DGTRLLSGGGEGQVRI  235 (515)
Q Consensus       158 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~i  235 (515)
                      ....+.+|.+-|.|+.|+.+|.+|++|+.|-.+.|||.-..+++..+..+|...|.++.|-|  +.+.+++|..|..|++
T Consensus        42 lE~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~l  121 (758)
T KOG1310|consen   42 LEAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKL  121 (758)
T ss_pred             hhhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEE
Confidence            34567899999999999999999999999999999999999999999899999999999999  5678899999999999


Q ss_pred             EEccCCc--------eeeEEeeccccCceEEEEEecCC-CEEEEEeCCCcEEEEEcccceEEEEEE-----------cCc
Q psy17610        236 WKLTRES--------QSLQCVLKEHTSSVSVIQIKSDS-KEAMSASTDGTCVLWDLIKSTRLIIMI-----------LPS  295 (515)
Q Consensus       236 w~~~~~~--------~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~-----------~~~  295 (515)
                      ||+...+        ......+..|...|..++..|++ ..+.++++||+++-+|++.......-.           .--
T Consensus       122 fdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~~~li  201 (758)
T KOG1310|consen  122 FDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYNPQLI  201 (758)
T ss_pred             EecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhchhhh
Confidence            9997421        23344567799999999999988 789999999999999998643211110           012


Q ss_pred             cEEEEEEcCCC-cEEEEEECCCeEEEEeCCCC--------c----------eEEEEecCC--------C---ccEEEEEE
Q psy17610        296 MIMSAAYHPSE-VQLITCSTNKMIDYWETCDG--------S----------IIRSLEGSD--------V---AAVNCVDF  345 (515)
Q Consensus       296 ~~~~~~~~~~~-~~l~~~~~~~~i~~~d~~~~--------~----------~~~~~~~~~--------~---~~i~~~~~  345 (515)
                      ...++.++|.. .+|++|+.+-..++||.+..        .          ++..+...+        .   ..++-++|
T Consensus       202 elk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~gn~~~~~~~~t~vtf  281 (758)
T KOG1310|consen  202 ELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQGNLDRYITCCTYVTF  281 (758)
T ss_pred             eeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCcccccccceeeeEEEEE
Confidence            46788999964 67888999999999994321        0          122221111        0   12566789


Q ss_pred             cCCCCEEEEEcCCCeEEEEEccCCee
Q psy17610        346 VDDGKYFLTGGADQIVKMWMYREGVP  371 (515)
Q Consensus       346 ~~~~~~l~~~~~dg~i~i~d~~~~~~  371 (515)
                      +|+|.-|++.-....|+++|+..++.
T Consensus       282 npNGtElLvs~~gEhVYlfdvn~~~~  307 (758)
T KOG1310|consen  282 NPNGTELLVSWGGEHVYLFDVNEDKS  307 (758)
T ss_pred             CCCCcEEEEeeCCeEEEEEeecCCCC
Confidence            99998887776667899999976543

>KOG2314|consensus

Probab=99.73  E-value=1.8e-14  Score=127.08  Aligned_cols=339  Identities=12%  Similarity=0.133  Sum_probs=224.0

Q ss_pred             EEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEe
Q psy17610        148 IRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSG  227 (515)
Q Consensus       148 i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  227 (515)
                      ...|+.........-...+-.-+-+.|||-|.||++--..| |.+|--++-...+.+  .|. .|.-+.|||..++|++=
T Consensus       192 svfwN~~~n~p~~ie~RenWTetyv~wSP~GTYL~t~Hk~G-I~lWGG~~f~r~~RF--~Hp-~Vq~idfSP~EkYLVT~  267 (698)
T KOG2314|consen  192 SVFWNSKFNEPSLIEERENWTETYVRWSPKGTYLVTFHKQG-IALWGGESFDRIQRF--YHP-GVQFIDFSPNEKYLVTY  267 (698)
T ss_pred             EEEccccCCchhhhhhhhcceeeeEEecCCceEEEEEeccc-eeeecCccHHHHHhc--cCC-CceeeecCCccceEEEe
Confidence            55677654332222222222346789999999999988777 889976655555555  454 58899999999999986


Q ss_pred             cC-----------CCcEEEEEccCCceeeEEeecc--ccCc-eEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEE-
Q psy17610        228 GG-----------EGQVRIWKLTRESQSLQCVLKE--HTSS-VSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMI-  292 (515)
Q Consensus       228 ~~-----------d~~i~iw~~~~~~~~~~~~~~~--~~~~-v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-  292 (515)
                      +.           ...+.|||+.++.  ....+..  .... -.-..||.|+++++.-..+ .|.+|+..+...+.... 
T Consensus       268 s~~p~~~~~~d~e~~~l~IWDI~tG~--lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~~-sisIyEtpsf~lld~Ksl  344 (698)
T KOG2314|consen  268 SPEPIIVEEDDNEGQQLIIWDIATGL--LKRSFPVIKSPYLKWPIFRWSHDDKYFARMTGN-SISIYETPSFMLLDKKSL  344 (698)
T ss_pred             cCCccccCcccCCCceEEEEEccccc--hhcceeccCCCccccceEEeccCCceeEEeccc-eEEEEecCceeeeccccc
Confidence            43           2579999996543  3333332  1222 2346789999999877764 69999877644433222 


Q ss_pred             cCccEEEEEEcCCCcEEEEEEC-----CCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcC----------
Q psy17610        293 LPSMIMSAAYHPSEVQLITCST-----NKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA----------  357 (515)
Q Consensus       293 ~~~~~~~~~~~~~~~~l~~~~~-----~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~----------  357 (515)
                      ....|....|+|.++.|+.-..     -..+.+..+.+++.+++....+ -.=..+-|-.+|.+|+.--.          
T Consensus       345 ki~gIr~FswsP~~~llAYwtpe~~~~parvtL~evPs~~~iRt~nlfn-VsDckLhWQk~gdyLcvkvdR~tK~~~~g~  423 (698)
T KOG2314|consen  345 KISGIRDFSWSPTSNLLAYWTPETNNIPARVTLMEVPSKREIRTKNLFN-VSDCKLHWQKSGDYLCVKVDRHTKSKVKGQ  423 (698)
T ss_pred             CCccccCcccCCCcceEEEEcccccCCcceEEEEecCccceeeecccee-eeccEEEeccCCcEEEEEEEeeccccccce
Confidence            2346889999999998886543     2357778888888887766554 22234677788888875321          


Q ss_pred             CCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCC---CcEEEEeCCCCcCccCCCcccceeeecccccccc
Q psy17610        358 DQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSAD---GGIFLWTFPELEDDVGDSRSLSSKISRSTARSTR  434 (515)
Q Consensus       358 dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~  434 (515)
                      -..+.|+.++..........-...|...+|-|.|+.+++.+.+   .++.+|.+......                  ..
T Consensus       424 f~n~eIfrireKdIpve~velke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~------------------~~  485 (698)
T KOG2314|consen  424 FSNLEIFRIREKDIPVEVVELKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKK------------------PS  485 (698)
T ss_pred             EeeEEEEEeeccCCCceeeecchheeeeeeccCCCeEEEEEccccccceeEEEeecCCCc------------------hh
Confidence            1235566665543222223456788999999999988877653   46888877642111                  11


Q ss_pred             eeeecCcccEEEeeeccCCcEEEEee---cCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeec------C
Q psy17610        435 LIIMILPSMIMSAAYHPSEVQLITCS---TNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA------D  505 (515)
Q Consensus       435 ~~~~~~~~~i~~~~~s~~~~~l~~~~---~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~------d  505 (515)
                      ++........+.+.|+|.|++++.+.   ..|.+.++|+.-..+..+-...| ...+.+.|.|.|+|++|++.      |
T Consensus       486 lVk~~dk~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~a~~k~~~~~eh-~~at~veWDPtGRYvvT~ss~wrhk~d  564 (698)
T KOG2314|consen  486 LVKELDKKFANTVFWSPKGRFVVVAALVSRRGDLEFYDTDYADLKDTASPEH-FAATEVEWDPTGRYVVTSSSSWRHKVD  564 (698)
T ss_pred             hhhhhcccccceEEEcCCCcEEEEEEecccccceEEEecchhhhhhccCccc-cccccceECCCCCEEEEeeehhhhccc
Confidence            11111223477899999999988664   57889999987544444333334 67788999999999999875      4


Q ss_pred             CeEEEEEE
Q psy17610        506 QIVKICLY  513 (515)
Q Consensus       506 g~v~iw~~  513 (515)
                      .--+||+|
T Consensus       565 ~GYri~tf  572 (698)
T KOG2314|consen  565 NGYRIFTF  572 (698)
T ss_pred             cceEEEEe
Confidence            45677776

>KOG1409|consensus

Probab=99.73  E-value=3.3e-16  Score=129.59  Aligned_cols=352  Identities=14%  Similarity=0.177  Sum_probs=233.3

Q ss_pred             ceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEe-cCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEE
Q psy17610        157 NELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFT-PQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRI  235 (515)
Q Consensus       157 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i  235 (515)
                      ..+..+.++.+.++....-|..+-+++.+.|.++++|- .+.++.-..+......+++++.+.++...|+.|-.+|++.-
T Consensus        15 ~ll~~~eG~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ngtvte   94 (404)
T KOG1409|consen   15 ELLSKIEGSQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDNGTVTE   94 (404)
T ss_pred             hhhhhhcCchhhhhhheeccCCCCeEEccccceeeeEEeccccccCchhhhhCCCCceEeeeeccceEEEEEEecceEEE
Confidence            34566788888888888888888899999999999994 44566555554556788999999999999999999999999


Q ss_pred             EEccC--CceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEE
Q psy17610        236 WKLTR--ESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCS  313 (515)
Q Consensus       236 w~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  313 (515)
                      +.+..  ++.........|...+..+-|+...+++++.+.|..+.---.+.+..+..+........+.+.-.  +...|.
T Consensus        95 fs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~~t~~~~d~~--~~fvGd  172 (404)
T KOG1409|consen   95 FALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFETPASALQFDAL--YAFVGD  172 (404)
T ss_pred             EEhhhhhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEeeccCCCCceeeE--EEEecc
Confidence            87743  23344556678999999999999999999999998766555555555444333322222222212  455566


Q ss_pred             CCCeEEEEeC--CCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCe-eeeeccCCCCCeeEEEECCC
Q psy17610        314 TNKMIDYWET--CDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGV-PCFVGIGHAASITKIKISPD  390 (515)
Q Consensus       314 ~~~~i~~~d~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~i~~~~~~~~  390 (515)
                      ..|.+....+  ....++.++.++. +.+.+++|.|..+.|++|..|..+.+||+..++ ....+.+|...|..+...+-
T Consensus       173 ~~gqvt~lr~~~~~~~~i~~~~~h~-~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~  251 (404)
T KOG1409|consen  173 HSGQITMLKLEQNGCQLITTFNGHT-GEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQH  251 (404)
T ss_pred             cccceEEEEEeecCCceEEEEcCcc-cceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhhh
Confidence            6666655443  4456677777766 899999999999999999999999999996543 34567899999999999988


Q ss_pred             CcEEEEEeCCCcEEEEeCCCCcCccCCCccc--ceeeeccccc-------ccceeeec----CcccEEEeeeccCCcEEE
Q psy17610        391 KKVIVSVSADGGIFLWTFPELEDDVGDSRSL--SSKISRSTAR-------STRLIIMI----LPSMIMSAAYHPSEVQLI  457 (515)
Q Consensus       391 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~--~~~~~~~~~~-------~~~~~~~~----~~~~i~~~~~s~~~~~l~  457 (515)
                      -+.|++++.||.|.+|+++....+...-..-  .........-       .....+..    +-+...+...+.+.....
T Consensus       252 t~~l~S~~edg~i~~w~mn~~r~etpewl~s~~cQ~c~qpffwn~~~m~~~k~~glr~h~crkcg~avc~~c~s~~~~~p  331 (404)
T KOG1409|consen  252 TRQLISCGEDGGIVVWNMNVKRVETPEWLDSDSCQKCNQPFFWNFRQMWDRKQLGLRQHHCRKCGKAVCGKCSSNRSSYP  331 (404)
T ss_pred             heeeeeccCCCeEEEEeccceeecCccccccchhhhhCchHHHHHHHHHhhhhhhhhhhhhhhhhhhcCcccccCccccc
Confidence            8999999999999999987654322111000  0000000000       00000000    000111111111111111


Q ss_pred             EeecCCeEEEE--------ecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEEEEEE
Q psy17610        458 TCSTNKMIDYW--------ETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLY  513 (515)
Q Consensus       458 ~~~~dg~v~iw--------d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~  513 (515)
                      +-+..-.+|+-        |.. ..++..+...+ ..|+.+.+...-.+|+|+|.|..|+|||.
T Consensus       332 ~mg~e~~vR~~~~c~~~i~~~~-~t~LA~phei~-tgItamhlqetlglLvTsG~~Rvi~iwd~  393 (404)
T KOG1409|consen  332 TMGFEFSVRVCDSCYPTIKDEE-RTPLAIPHEIK-TGITAMHLQETLGLLVTSGTDRVIKIWDV  393 (404)
T ss_pred             cccceeEEEEecccchhhhcCC-CCccccccccc-cceeEEEhhhhccceeecCCceEEEEEec
Confidence            11222234443        322 23344444333 67999999988889999999999999996

>KOG1354|consensus

Probab=99.73  E-value=9.9e-16  Score=126.82  Aligned_cols=349  Identities=16%  Similarity=0.242  Sum_probs=206.7

Q ss_pred             cCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCce----eEEeeccCc------------cCeEEEEeCCCC--cEEE
Q psy17610         79 KDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFT----LTLVNTCHT------------SAIYDLQFPVNF--SSVF  140 (515)
Q Consensus        79 ~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~----~~~~~~~h~------------~~v~~~~~~~~~--~~l~  140 (515)
                      ....-|.++.|...|++||+|..+|.|.++.-+....    ....++.|.            ..|..+.|.+++  ..++
T Consensus        23 teadiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FL  102 (433)
T KOG1354|consen   23 TEADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFL  102 (433)
T ss_pred             chhcceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEE
Confidence            3457799999999999999999999999997654222    333444443            468889998765  4677


Q ss_pred             EEecCCcEEEEeCCCCceeEE-E----EecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEE
Q psy17610        141 ATCSKNDIRIWSVRTLNELLR-I----SVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTAL  215 (515)
Q Consensus       141 ~~~~d~~i~iw~~~~~~~~~~-~----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~  215 (515)
                      ..+.|++|++|.+........ .    ......++++..      .+.+..+-.+      ...+...+..+|.--|+++
T Consensus       103 lstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~------p~~~~~~~~v------ea~prRv~aNaHtyhiNSI  170 (433)
T KOG1354|consen  103 LSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRL------PVEGRHDLEV------EASPRRVYANAHTYHINSI  170 (433)
T ss_pred             EecCCcceeeeeeeccccccccccccccCCCCccceeec------eeecccccee------eeeeeeeccccceeEeeee
Confidence            778899999999875332220 0    011111222111      1111111111      1123444557899999999


Q ss_pred             EEcCCCCEEEEecCCCcEEEEEccCCceeeE-Ee-----eccccCceEEEEEecC-CCEEEEEeCCCcEEEEEcccceEE
Q psy17610        216 AITQDGTRLLSGGGEGQVRIWKLTRESQSLQ-CV-----LKEHTSSVSVIQIKSD-SKEAMSASTDGTCVLWDLIKSTRL  288 (515)
Q Consensus       216 ~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~-~~-----~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~  288 (515)
                      .++.|...++++ .|=.|.+|++.-..+..- ..     +..-+.-|++..|+|. .+.++..+..|+|++-|++.....
T Consensus       171 S~NsD~Et~lSA-DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLC  249 (433)
T KOG1354|consen  171 SVNSDKETFLSA-DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALC  249 (433)
T ss_pred             eecCccceEeec-cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhh
Confidence            999999988876 457899999853322211 11     1223456788888885 456777778889999988743211


Q ss_pred             EEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEc-c
Q psy17610        289 IIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMY-R  367 (515)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~-~  367 (515)
                      .                          ..-+++.......-+.+-..--..|..+.|+++|+++++-.. -+|++||+ .
T Consensus       250 d--------------------------~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~nm  302 (433)
T KOG1354|consen  250 D--------------------------AHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDLNM  302 (433)
T ss_pred             c--------------------------chhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEecc-ceeEEEeccc
Confidence            0                          000111100000001111111156788999999999998764 48999999 4


Q ss_pred             CCeeeeeccCCC------------CCe---eEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCc-ccceeeeccccc
Q psy17610        368 EGVPCFVGIGHA------------ASI---TKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSR-SLSSKISRSTAR  431 (515)
Q Consensus       368 ~~~~~~~~~~~~------------~~i---~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-~~~~~~~~~~~~  431 (515)
                      ..+++.+++-|.            ..|   ..++|+.++.+++||+....++++++..+........ .......+....
T Consensus       303 e~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~~~v~TGsy~n~frvf~~~~gsk~d~tl~asr~~~~~~~~~k  382 (433)
T KOG1354|consen  303 EAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGNDSYVMTGSYNNVFRVFNLARGSKEDFTLEASRKNMKPRKVLK  382 (433)
T ss_pred             cCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCCcceEecccccceEEEecCCCCcceeecccccccCCccccccc
Confidence            456666665553            122   3578999999999999999999999665532211100 000000000000


Q ss_pred             cc-------------ceeeecCcccEEEeeeccCCcEEEEeecCCeEEEE
Q psy17610        432 ST-------------RLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYW  468 (515)
Q Consensus       432 ~~-------------~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iw  468 (515)
                      ..             ..........+...+|+|..+.+|++..+. +++|
T Consensus       383 ~~~V~~~g~r~~~~~~vd~ldf~kkilh~aWhp~en~ia~aatnn-lyif  431 (433)
T KOG1354|consen  383 LRLVSSSGKRKRDEISVDALDFRKKILHTAWHPKENSIAVAATNN-LYIF  431 (433)
T ss_pred             ceeeecCCCccccccccchhhhhhHHHhhccCCccceeeeeecCc-eEEe
Confidence            00             000111223477788999999988887654 5554

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=99.73  E-value=1.5e-12  Score=130.56  Aligned_cols=406  Identities=13%  Similarity=0.096  Sum_probs=249.2

Q ss_pred             CCCcEEEEEEecCCCEEEEEecCceEEEE----ECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCC
Q psy17610         80 DDSGISSLQYNPVNNKVFVGTVNCEIFLI----DMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRT  155 (515)
Q Consensus        80 ~~~~v~~~~~s~~~~~l~~~~~d~~i~iw----~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~  155 (515)
                      ..+.|.++.|-++...+..+..+|.|.+.    +..+  ........-...|.+++||||+..|+.++.++++.+.+-.=
T Consensus        74 ~~~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~--~~~E~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~mt~~f  151 (928)
T PF04762_consen   74 PNDKIVSFQYLADSESLCIALASGDIILVREDPDPDE--DEIEIVGSVDSGILAASWSPDEELLALVTGEGNLLLMTRDF  151 (928)
T ss_pred             CCCcEEEEEeccCCCcEEEEECCceEEEEEccCCCCC--ceeEEEEEEcCcEEEEEECCCcCEEEEEeCCCEEEEEeccc
Confidence            45789999999999999999999999999    5554  22333334567899999999999999999998887764210


Q ss_pred             -----------------------CceeEEEEe------------------------cCeEEEEEEEeeCCCEEEEEeC--
Q psy17610        156 -----------------------LNELLRISV------------------------MNMICACIVFTYDGKAILSGWN--  186 (515)
Q Consensus       156 -----------------------~~~~~~~~~------------------------~~~~v~~~~~~~~~~~l~~~~~--  186 (515)
                                             |+.-.++++                        ....-..++|-.||.++|+.+.  
T Consensus       152 d~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s~dd~~~~ISWRGDG~yFAVss~~~  231 (928)
T PF04762_consen  152 DPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLSWDDGRVRISWRGDGEYFAVSSVEP  231 (928)
T ss_pred             eEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccccCCCceEEEECCCCcEEEEEEEEc
Confidence                                   111111110                        1223456889999999998764  


Q ss_pred             -C---CeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecC---CCcEEEEEccCCc-eeeEEeeccccCceEE
Q psy17610        187 -D---GFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGG---EGQVRIWKLTRES-QSLQCVLKEHTSSVSV  258 (515)
Q Consensus       187 -d---g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~iw~~~~~~-~~~~~~~~~~~~~v~~  258 (515)
                       .   ..+++|+-+ |+..... ..-.+--.+++|.|.|+++|+...   ...|.+|.-+... +.+...+......|..
T Consensus       232 ~~~~~R~iRVy~Re-G~L~stS-E~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfErNGLrhgeF~l~~~~~~~~v~~  309 (928)
T PF04762_consen  232 ETGSRRVIRVYSRE-GELQSTS-EPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFERNGLRHGEFTLRFDPEEEKVIE  309 (928)
T ss_pred             CCCceeEEEEECCC-ceEEecc-ccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEecCCcEeeeEecCCCCCCceeeE
Confidence             2   579999965 6655444 344444567899999999997754   3567777753211 1222222245668999


Q ss_pred             EEEecCCCEEEEEeCCCcEEEEEcccceE--EEEEE--cCccEEEEEEcCCC-cEEEEEECCCeEEEEeCCCCceEEEEe
Q psy17610        259 IQIKSDSKEAMSASTDGTCVLWDLIKSTR--LIIMI--LPSMIMSAAYHPSE-VQLITCSTNKMIDYWETCDGSIIRSLE  333 (515)
Q Consensus       259 ~~~~~~~~~l~~~~~d~~i~iwd~~~~~~--~~~~~--~~~~~~~~~~~~~~-~~l~~~~~~~~i~~~d~~~~~~~~~~~  333 (515)
                      +.|++|+..|+....|. |.+|-..+..-  .+.+.  ....+..+.|+|.. ..|...+.++.+..++..         
T Consensus       310 l~Wn~ds~iLAv~~~~~-vqLWt~~NYHWYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~~~~~---------  379 (928)
T PF04762_consen  310 LAWNSDSEILAVWLEDR-VQLWTRSNYHWYLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYEIYDFA---------  379 (928)
T ss_pred             EEECCCCCEEEEEecCC-ceEEEeeCCEEEEEEEEEccCCCCCCceEECCCCCCEEEEEecCCcEEEEEEE---------
Confidence            99999999999877665 99998877542  22222  22345569999954 456666666776665531         


Q ss_pred             cCCCccEEEEEEc----CCCCEEEEEcCCCeEEEEEccCCe-----eeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEE
Q psy17610        334 GSDVAAVNCVDFV----DDGKYFLTGGADQIVKMWMYREGV-----PCFVGIGHAASITKIKISPDKKVIVSVSADGGIF  404 (515)
Q Consensus       334 ~~~~~~i~~~~~~----~~~~~l~~~~~dg~i~i~d~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~  404 (515)
                             ..+..+    |+..-++..-....+.+-.++...     ....+ .-..+|.+++|++++..+++...||.+.
T Consensus       380 -------~~v~~s~~~~~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~l-~~~~~v~~vaf~~~~~~~avl~~d~~l~  451 (928)
T PF04762_consen  380 -------WDVSRSPGSSPNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYEL-ELPSPVNDVAFSPSNSRFAVLTSDGSLS  451 (928)
T ss_pred             -------EEEEecCCCCccCceEEEEEeCCeEEEecccccCCCchHhceEE-cCCCCcEEEEEeCCCCeEEEEECCCCEE
Confidence                   111111    222222222223356666655431     11222 3357899999999998899999999999


Q ss_pred             EEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecC---CeEEEEecCCCe---eeee
Q psy17610        405 LWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTN---KMIDYWETCDGS---IIRS  478 (515)
Q Consensus       405 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---g~v~iwd~~~~~---~~~~  478 (515)
                      +|......................  .............+..++|..+...++..+.+   ..+.+++....+   ....
T Consensus       452 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  529 (928)
T PF04762_consen  452 IYEWDLKNMWSVKPPKLLSSISLD--SMDISDSELPLGSLRQLAWLNDDTLLVLSDSDSNQSKIVLVDIDDSENSASVES  529 (928)
T ss_pred             EEEecCCCcccccCcchhhhcccc--cccccccccccccEEEEEEeCCCEEEEEEecCcccceEEEEEeccCCCceeEEE
Confidence            998655432211111111111000  00000111123457888898888777766654   568888874432   2222


Q ss_pred             ecccccceEEEEEEcCCCcEEEEeecCCeEEE
Q psy17610        479 LEGSDVAAVNCVDFVDDGKYFLTGGADQIVKI  510 (515)
Q Consensus       479 ~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~i  510 (515)
                      ..... ..+..+...++...++.-..||.+..
T Consensus       530 ~~~~~-~~~~~~~~~~~~~~~~~q~~~G~v~~  560 (928)
T PF04762_consen  530 STEVD-GVVLIISSSPDSGSLYIQTNDGKVFQ  560 (928)
T ss_pred             EeccC-ceEEEEeeCCCCcEEEEEECCCEEEE
Confidence            22222 55666666666554566667887663

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.73  E-value=4.3e-15  Score=139.55  Aligned_cols=220  Identities=13%  Similarity=0.116  Sum_probs=151.7

Q ss_pred             EEEecCCCcEEEEEEecCCCEEEEEec---CceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec-CCc--E
Q psy17610         75 LYLLKDDSGISSLQYNPVNNKVFVGTV---NCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS-KND--I  148 (515)
Q Consensus        75 ~~~~~~~~~v~~~~~s~~~~~l~~~~~---d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-d~~--i  148 (515)
                      ..+..|...+.+.+|+|||+.|+..+.   +..|++||+.++...  .+..+.+.+...+|+|||+.|+.+.. ++.  |
T Consensus       195 ~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~--~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~I  272 (435)
T PRK05137        195 RYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE--LVGNFPGMTFAPRFSPDGRKVVMSLSQGGNTDI  272 (435)
T ss_pred             EEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE--EeecCCCcccCcEECCCCCEEEEEEecCCCceE
Confidence            345567889999999999999988764   468999999986543  23346667889999999998875543 544  7


Q ss_pred             EEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeC-C--CeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEE
Q psy17610        149 RIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWN-D--GFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLL  225 (515)
Q Consensus       149 ~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d--g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  225 (515)
                      .+||+++++. ..+..+........|+|||+.|+..+. +  ..|.++|+.+++.....  .+...+....|+|+|+.|+
T Consensus       273 y~~d~~~~~~-~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~~lt--~~~~~~~~~~~SpdG~~ia  349 (435)
T PRK05137        273 YTMDLRSGTT-TRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPRRIS--FGGGRYSTPVWSPRGDLIA  349 (435)
T ss_pred             EEEECCCCce-EEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeEEee--cCCCcccCeEECCCCCEEE
Confidence            7779887654 455555556677899999999887764 3  36888898877655433  2344566789999999998


Q ss_pred             EecCC---CcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCC------CcEEEEEcccceEEEEEEcCcc
Q psy17610        226 SGGGE---GQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTD------GTCVLWDLIKSTRLIIMILPSM  296 (515)
Q Consensus       226 ~~~~d---~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~  296 (515)
                      ....+   ..|.+||+......   .+. ....+....|+|||+.++..+.+      ..+.++|+..+.. ..+..+..
T Consensus       350 ~~~~~~~~~~i~~~d~~~~~~~---~lt-~~~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~~~-~~l~~~~~  424 (435)
T PRK05137        350 FTKQGGGQFSIGVMKPDGSGER---ILT-SGFLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTGRNE-REVPTPGD  424 (435)
T ss_pred             EEEcCCCceEEEEEECCCCceE---ecc-CCCCCCCCeECCCCCEEEEEEccCCCCCcceEEEEECCCCce-EEccCCCC
Confidence            76543   35777887433221   222 12346778999999998876543      2577778765544 33334444


Q ss_pred             EEEEEEcC
Q psy17610        297 IMSAAYHP  304 (515)
Q Consensus       297 ~~~~~~~~  304 (515)
                      +...+|+|
T Consensus       425 ~~~p~Wsp  432 (435)
T PRK05137        425 ASDPAWSP  432 (435)
T ss_pred             ccCcccCC
Confidence            55556655

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=99.72  E-value=4.7e-12  Score=127.01  Aligned_cols=328  Identities=14%  Similarity=0.165  Sum_probs=211.2

Q ss_pred             CCCcEEEEEEecCCCEEEEEecCceEEEEECCC-------------C----------ceeEEe-----------------
Q psy17610         80 DDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNS-------------G----------FTLTLV-----------------  119 (515)
Q Consensus        80 ~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~-------------~----------~~~~~~-----------------  119 (515)
                      -+.+|.|++||||++.||..+.++++.+.+.+=             |          ++...+                 
T Consensus       119 vd~GI~a~~WSPD~Ella~vT~~~~l~~mt~~fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~  198 (928)
T PF04762_consen  119 VDSGILAASWSPDEELLALVTGEGNLLLMTRDFDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTV  198 (928)
T ss_pred             EcCcEEEEEECCCcCEEEEEeCCCEEEEEeccceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCC
Confidence            368999999999999999999999988865320             0          000000                 


Q ss_pred             -------eccCccCeEEEEeCCCCcEEEEEec---C---CcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeC
Q psy17610        120 -------NTCHTSAIYDLQFPVNFSSVFATCS---K---NDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWN  186 (515)
Q Consensus       120 -------~~~h~~~v~~~~~~~~~~~l~~~~~---d---~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  186 (515)
                             +. +...-..++|-.||.++++.+.   .   +.++||+-+ |.....-..-.+--.+++|-|.|+++|+...
T Consensus       199 ~~~d~~~~s-~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE~v~gLe~~l~WrPsG~lIA~~q~  276 (928)
T PF04762_consen  199 PKVDEGKLS-WDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQSTSEPVDGLEGALSWRPSGNLIASSQR  276 (928)
T ss_pred             CccccCccc-cCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ceEEeccccCCCccCCccCCCCCCEEEEEEE
Confidence                   00 2224567889999999998875   2   469999965 5543333333333467899999999988765


Q ss_pred             ---CCeEEEEecCCCceEEEec---CCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccc-cCceEEE
Q psy17610        187 ---DGFIRCFTPQSGKLKFIIP---NAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEH-TSSVSVI  259 (515)
Q Consensus       187 ---dg~i~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~-~~~v~~~  259 (515)
                         ...|.+|.- +|.....+.   ......|..+.|++++..||....|. |.+|-..+-..-+.+.+... ...+..+
T Consensus       277 ~~~~~~VvFfEr-NGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NYHWYLKqei~~~~~~~~~~~  354 (928)
T PF04762_consen  277 LPDRHDVVFFER-NGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSNYHWYLKQEIRFSSSESVNFV  354 (928)
T ss_pred             cCCCcEEEEEec-CCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeCCEEEEEEEEEccCCCCCCce
Confidence               345777764 333332221   14566799999999999999877655 99999865555555544422 2334558


Q ss_pred             EEecCC-CEEEEEeCCCcEEEEEcc----c----------------ceE----------------EEEEEcCccEEEEEE
Q psy17610        260 QIKSDS-KEAMSASTDGTCVLWDLI----K----------------STR----------------LIIMILPSMIMSAAY  302 (515)
Q Consensus       260 ~~~~~~-~~l~~~~~d~~i~iwd~~----~----------------~~~----------------~~~~~~~~~~~~~~~  302 (515)
                      .|+|.. ..|...+.+|.+..+++.    .                |..                ...+..+.++..++|
T Consensus       355 ~Wdpe~p~~L~v~t~~g~~~~~~~~~~v~~s~~~~~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~l~~~~~v~~vaf  434 (928)
T PF04762_consen  355 KWDPEKPLRLHVLTSNGQYEIYDFAWDVSRSPGSSPNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYELELPSPVNDVAF  434 (928)
T ss_pred             EECCCCCCEEEEEecCCcEEEEEEEEEEEecCCCCccCceEEEEEeCCeEEEecccccCCCchHhceEEcCCCCcEEEEE
Confidence            898853 446666665666555431    0                111                122334567999999


Q ss_pred             cCCCcEEEEEECCCeEEEEeCCCCceE--------EEEec---------CCCccEEEEEEcCCCCEEEEEcCC---CeEE
Q psy17610        303 HPSEVQLITCSTNKMIDYWETCDGSII--------RSLEG---------SDVAAVNCVDFVDDGKYFLTGGAD---QIVK  362 (515)
Q Consensus       303 ~~~~~~l~~~~~~~~i~~~d~~~~~~~--------~~~~~---------~~~~~i~~~~~~~~~~~l~~~~~d---g~i~  362 (515)
                      ++++..+++-..+|.+.+|........        ..+..         .....+..++|..+..+++....+   ..+.
T Consensus       435 ~~~~~~~avl~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  514 (928)
T PF04762_consen  435 SPSNSRFAVLTSDGSLSIYEWDLKNMWSVKPPKLLSSISLDSMDISDSELPLGSLRQLAWLNDDTLLVLSDSDSNQSKIV  514 (928)
T ss_pred             eCCCCeEEEEECCCCEEEEEecCCCcccccCcchhhhcccccccccccccccccEEEEEEeCCCEEEEEEecCcccceEE
Confidence            999988999999999999885433211        11111         112567788888877766666554   5788


Q ss_pred             EEEccCCe---eeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCC
Q psy17610        363 MWMYREGV---PCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPEL  411 (515)
Q Consensus       363 i~d~~~~~---~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  411 (515)
                      +++....+   .......-...+..+...++...++.-..+|.+...+....
T Consensus       515 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~G~v~~~~~~~~  566 (928)
T PF04762_consen  515 LVDIDDSENSASVESSTEVDGVVLIISSSPDSGSLYIQTNDGKVFQLSSDGE  566 (928)
T ss_pred             EEEeccCCCceeEEEEeccCceEEEEeeCCCCcEEEEEECCCEEEEeecCCC
Confidence            88774332   23333334555666666666655667778999886665544

>KOG1409|consensus

Probab=99.72  E-value=1.1e-15  Score=126.58  Aligned_cols=331  Identities=15%  Similarity=0.187  Sum_probs=233.5

Q ss_pred             EEecCCCcEEEEEEecCCCEEEEEecCceEEEEEC-CCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCC
Q psy17610         76 YLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDM-NSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVR  154 (515)
Q Consensus        76 ~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~-~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~  154 (515)
                      ++.||.+.|++...-|..+-+++.+.|.++++|-- +.++.-..+......+++++.+.++...|+++-..|++.-+.+.
T Consensus        19 ~~eG~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ngtvtefs~s   98 (404)
T KOG1409|consen   19 KIEGSQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDNGTVTEFALS   98 (404)
T ss_pred             hhcCchhhhhhheeccCCCCeEEccccceeeeEEeccccccCchhhhhCCCCceEeeeeccceEEEEEEecceEEEEEhh
Confidence            45688999999999998888999999999999954 44544455555567789999999998888888889999888654


Q ss_pred             ----CCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCC
Q psy17610        155 ----TLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGE  230 (515)
Q Consensus       155 ----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  230 (515)
                          ....++....|...+..+.|+.....+++.+.|..+.---.+.+..+..+..  ....+++.+.-.  +...|...
T Consensus        99 edfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~--~~~~t~~~~d~~--~~fvGd~~  174 (404)
T KOG1409|consen   99 EDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNF--ETPASALQFDAL--YAFVGDHS  174 (404)
T ss_pred             hhhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEe--eccCCCCceeeE--EEEecccc
Confidence                3445666778999999999999999999999998776555555554433211  111111222111  55667778


Q ss_pred             CcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccc--eEEEEEEcCccEEEEEEcCCCcE
Q psy17610        231 GQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKS--TRLIIMILPSMIMSAAYHPSEVQ  308 (515)
Q Consensus       231 ~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~  308 (515)
                      |.|.+-.+......+...+.+|.+.+.+++|.+....++++..|..+.+||+.-.  .......+...+..+...+--+.
T Consensus       175 gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~  254 (404)
T KOG1409|consen  175 GQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQ  254 (404)
T ss_pred             cceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhhee
Confidence            8888888776777888899999999999999999999999999999999998643  34444455667888888888889


Q ss_pred             EEEEECCCeEEEEeCCCCceEEE-E----------------------------ecCC---CccEEEEEEcCCCCEEEEEc
Q psy17610        309 LITCSTNKMIDYWETCDGSIIRS-L----------------------------EGSD---VAAVNCVDFVDDGKYFLTGG  356 (515)
Q Consensus       309 l~~~~~~~~i~~~d~~~~~~~~~-~----------------------------~~~~---~~~i~~~~~~~~~~~l~~~~  356 (515)
                      +++++.||.|.+|+......... .                            ..++   -+..-|...+.+.....+-+
T Consensus       255 l~S~~edg~i~~w~mn~~r~etpewl~s~~cQ~c~qpffwn~~~m~~~k~~glr~h~crkcg~avc~~c~s~~~~~p~mg  334 (404)
T KOG1409|consen  255 LISCGEDGGIVVWNMNVKRVETPEWLDSDSCQKCNQPFFWNFRQMWDRKQLGLRQHHCRKCGKAVCGKCSSNRSSYPTMG  334 (404)
T ss_pred             eeeccCCCeEEEEeccceeecCccccccchhhhhCchHHHHHHHHHhhhhhhhhhhhhhhhhhhcCcccccCcccccccc
Confidence            99999999999999865432110 0                            0000   01111222222222222223


Q ss_pred             CCCeEEEEEcc-------CCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCC
Q psy17610        357 ADQIVKMWMYR-------EGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPE  410 (515)
Q Consensus       357 ~dg~i~i~d~~-------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~  410 (515)
                      ..-.+++.|.-       +..++..+..-...|+.+.+...-.+|+|++.|..|+|||++.
T Consensus       335 ~e~~vR~~~~c~~~i~~~~~t~LA~phei~tgItamhlqetlglLvTsG~~Rvi~iwd~~~  395 (404)
T KOG1409|consen  335 FEFSVRVCDSCYPTIKDEERTPLAIPHEIKTGITAMHLQETLGLLVTSGTDRVIKIWDVRS  395 (404)
T ss_pred             ceeEEEEecccchhhhcCCCCccccccccccceeEEEhhhhccceeecCCceEEEEEechh
Confidence            33345554421       1233444444456799999998888999999999999999865

>KOG2394|consensus

Probab=99.72  E-value=6.5e-16  Score=135.36  Aligned_cols=241  Identities=21%  Similarity=0.232  Sum_probs=167.8

Q ss_pred             EEEEEEeeCCCEEEEEeCCCeEEEEecCCCceE----EEecCCCCCCeEEEEE-----cCCCCEEEEecCCCcEEEEEcc
Q psy17610        169 CACIVFTYDGKAILSGWNDGFIRCFTPQSGKLK----FIIPNAHNRGVTALAI-----TQDGTRLLSGGGEGQVRIWKLT  239 (515)
Q Consensus       169 v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~----~~~~~~~~~~v~~~~~-----~~~~~~l~~~~~d~~i~iw~~~  239 (515)
                      +....++-.|++|+..- ...+.+|+.+.+...    ..... .....+|-+|     .|.+--++.|-.-|.+.+.|..
T Consensus       126 ~~~~~~~~~gd~lcFnv-g~~lyv~~~~g~~~~~~pi~k~~y-~gt~P~cHdfn~~~a~~~g~dllIGf~tGqvq~idp~  203 (636)
T KOG2394|consen  126 VTNTNQSGKGDRLCFNV-GRELYVYSYRGAADLSKPIDKREY-KGTSPTCHDFNSFTATPKGLDLLIGFTTGQVQLIDPI  203 (636)
T ss_pred             eeeccccCCCCEEEEec-CCeEEEEEccCcchhccchhhhcc-cCCCCceecccccccCCCCcceEEeeccCceEEecch
Confidence            34444555566666543 235778877643221    11100 1111223333     3456678888888999999875


Q ss_pred             CCceeeEEee--ccccCceEEEEEecCC-CEEEEEeCCCcEEEEEccc--------------ceEEE-------------
Q psy17610        240 RESQSLQCVL--KEHTSSVSVIQIKSDS-KEAMSASTDGTCVLWDLIK--------------STRLI-------------  289 (515)
Q Consensus       240 ~~~~~~~~~~--~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~--------------~~~~~-------------  289 (515)
                      ..+.......  .-....++++.|-|.+ ..++.+-.+|.++++|...              +....             
T Consensus       204 ~~~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv  283 (636)
T KOG2394|consen  204 NFEVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPV  283 (636)
T ss_pred             hhHHHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCcc
Confidence            3211111111  1124689999998854 4566777899999997521              11110             


Q ss_pred             -EE-EcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEcc
Q psy17610        290 -IM-ILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYR  367 (515)
Q Consensus       290 -~~-~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~  367 (515)
                       .. .....+...+|+|||++|++.+.||.++|||..+.+.+..++.-. +...|++|||||++|++|++|..|.||.+.
T Consensus       284 ~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYF-GGLLCvcWSPDGKyIvtGGEDDLVtVwSf~  362 (636)
T KOG2394|consen  284 ARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYF-GGLLCVCWSPDGKYIVTGGEDDLVTVWSFE  362 (636)
T ss_pred             ceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHhhc-cceEEEEEcCCccEEEecCCcceEEEEEec
Confidence             00 112358889999999999999999999999999888776666544 789999999999999999999999999999


Q ss_pred             CCeeeeeccCCCCCeeEEEECCC-----------------------------------C-------------cEEEEEeC
Q psy17610        368 EGVPCFVGIGHAASITKIKISPD-----------------------------------K-------------KVIVSVSA  399 (515)
Q Consensus       368 ~~~~~~~~~~~~~~i~~~~~~~~-----------------------------------~-------------~~l~~~~~  399 (515)
                      .++.+..-.+|...|+.++|.|-                                   +             -.+.+.+.
T Consensus       363 erRVVARGqGHkSWVs~VaFDpytt~~ee~~~~~~~~~~~~~~~~~~~~r~~~~~S~~~~~~s~~~~~~~v~YRfGSVGq  442 (636)
T KOG2394|consen  363 ERRVVARGQGHKSWVSVVAFDPYTTSTEEWNNFSGMDSTFSDVAHDFEIRANGTGSAEGCPLSSFNRINSVTYRFGSVGQ  442 (636)
T ss_pred             cceEEEeccccccceeeEeecccccccccccccccccccccchhcccccccCCCCCcCCCcccccccccceEEEeecccc
Confidence            99999999999999999999830                                   1             15677888


Q ss_pred             CCcEEEEeCCCCc
Q psy17610        400 DGGIFLWTFPELE  412 (515)
Q Consensus       400 dg~i~iw~~~~~~  412 (515)
                      |..+.+||+....
T Consensus       443 DTqlcLWDlteD~  455 (636)
T KOG2394|consen  443 DTQLCLWDLTEDV  455 (636)
T ss_pred             cceEEEEecchhh
Confidence            9999999997643

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.72  E-value=3.3e-15  Score=140.15  Aligned_cols=234  Identities=13%  Similarity=0.086  Sum_probs=162.4

Q ss_pred             CcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCC---CeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCC
Q psy17610        146 NDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWND---GFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGT  222 (515)
Q Consensus       146 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  222 (515)
                      ..|.+||.. +...+.+..+...+.+.+|+|||+.|+..+.+   ..|.+||+.+++.....  .......+..|+|+|+
T Consensus       184 ~~l~i~D~~-g~~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~l~--~~~g~~~~~~~SpDG~  260 (433)
T PRK04922        184 YALQVADSD-GYNPQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRELVA--SFRGINGAPSFSPDGR  260 (433)
T ss_pred             EEEEEECCC-CCCceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEEec--cCCCCccCceECCCCC
Confidence            358999985 45556676677788999999999999987643   46999999888764432  3344456789999999


Q ss_pred             EEE-EecCCC--cEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeC-CCc--EEEEEcccceEEEEEEcCcc
Q psy17610        223 RLL-SGGGEG--QVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST-DGT--CVLWDLIKSTRLIIMILPSM  296 (515)
Q Consensus       223 ~l~-~~~~d~--~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~--i~iwd~~~~~~~~~~~~~~~  296 (515)
                      .++ +.+.+|  .|.+||+....   ...+..+.......+|+||++.++..+. +|.  |.++|+.+++..........
T Consensus       261 ~l~~~~s~~g~~~Iy~~d~~~g~---~~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~lt~~g~~  337 (433)
T PRK04922        261 RLALTLSRDGNPEIYVMDLGSRQ---LTRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAERLTFQGNY  337 (433)
T ss_pred             EEEEEEeCCCCceEEEEECCCCC---eEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEEeecCCCC
Confidence            776 444555  58888885433   2234445445567899999999887764 444  66777766654443333334


Q ss_pred             EEEEEEcCCCcEEEEEECCC---eEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCC---CeEEEEEccCCe
Q psy17610        297 IMSAAYHPSEVQLITCSTNK---MIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGAD---QIVKMWMYREGV  370 (515)
Q Consensus       297 ~~~~~~~~~~~~l~~~~~~~---~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---g~i~i~d~~~~~  370 (515)
                      ....+|+|+++.++..+.++   .|.+||+.+++.. .+...  .......|+|||++++..+.+   +.+.++++. +.
T Consensus       338 ~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~-~Lt~~--~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~-g~  413 (433)
T PRK04922        338 NARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR-TLTPG--SLDESPSFAPNGSMVLYATREGGRGVLAAVSTD-GR  413 (433)
T ss_pred             ccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeE-ECCCC--CCCCCceECCCCCEEEEEEecCCceEEEEEECC-CC
Confidence            55789999999998765443   6999999887754 33322  233457899999988876653   457888884 44


Q ss_pred             eeeeccCCCCCeeEEEECC
Q psy17610        371 PCFVGIGHAASITKIKISP  389 (515)
Q Consensus       371 ~~~~~~~~~~~i~~~~~~~  389 (515)
                      ....+..+.+.+...+|+|
T Consensus       414 ~~~~l~~~~g~~~~p~wsp  432 (433)
T PRK04922        414 VRQRLVSADGEVREPAWSP  432 (433)
T ss_pred             ceEEcccCCCCCCCCccCC
Confidence            4555555667778888876

>KOG3881|consensus

Probab=99.72  E-value=1.6e-15  Score=127.85  Aligned_cols=222  Identities=15%  Similarity=0.186  Sum_probs=171.2

Q ss_pred             ecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCc----eeEEeeccCccCeEEEEeCCCCcEEEEEe-cC--CcEEE
Q psy17610         78 LKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGF----TLTLVNTCHTSAIYDLQFPVNFSSVFATC-SK--NDIRI  150 (515)
Q Consensus        78 ~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~----~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-~d--~~i~i  150 (515)
                      ....++|..++..  ...|++|..+|.+.+|..+.+.    .+....  -..++..+.-++..+++++.+ ..  ..+.|
T Consensus       102 ~l~~~~I~gl~~~--dg~Litc~~sG~l~~~~~k~~d~hss~l~~la--~g~g~~~~r~~~~~p~Iva~GGke~~n~lki  177 (412)
T KOG3881|consen  102 SLGTKSIKGLKLA--DGTLITCVSSGNLQVRHDKSGDLHSSKLIKLA--TGPGLYDVRQTDTDPYIVATGGKENINELKI  177 (412)
T ss_pred             ccccccccchhhc--CCEEEEEecCCcEEEEeccCCccccccceeee--cCCceeeeccCCCCCceEecCchhcccceee
Confidence            3445677777665  4468888899999999998432    222222  235677888888777877744 46  78999


Q ss_pred             EeCCCCceeEEEEec---------CeEEEEEEEeeC--CCEEEEEeCCCeEEEEecCCCc-eEEEecCCCCCCeEEEEEc
Q psy17610        151 WSVRTLNELLRISVM---------NMICACIVFTYD--GKAILSGWNDGFIRCFTPQSGK-LKFIIPNAHNRGVTALAIT  218 (515)
Q Consensus       151 w~~~~~~~~~~~~~~---------~~~v~~~~~~~~--~~~l~~~~~dg~i~~~~~~~~~-~~~~~~~~~~~~v~~~~~~  218 (515)
                      ||++..+++.+-+..         .-.++.+.|.+.  ...|++++.-+.+++||.+.++ ++..+ .-...+++++...
T Consensus       178 wdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~f-d~~E~~is~~~l~  256 (412)
T KOG3881|consen  178 WDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQF-DFLENPISSTGLT  256 (412)
T ss_pred             eecccceeeeeccCCCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccCcceeEe-ccccCcceeeeec
Confidence            999988665544321         124678889887  7899999999999999998765 45555 4567899999999


Q ss_pred             CCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEE
Q psy17610        219 QDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIM  298 (515)
Q Consensus       219 ~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~  298 (515)
                      |+++++++|..-|.+..||++. .....+.+.+..+.|+++..+|...++++++-|+.++|+|+.+.+.+......+.++
T Consensus       257 p~gn~Iy~gn~~g~l~~FD~r~-~kl~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~ktrkll~kvYvKs~lt  335 (412)
T KOG3881|consen  257 PSGNFIYTGNTKGQLAKFDLRG-GKLLGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTRKLLHKVYVKSRLT  335 (412)
T ss_pred             CCCcEEEEecccchhheecccC-ceeeccccCCccCCcceEEEcCCCceEEeeccceeEEEeecccchhhhhhhhhcccc
Confidence            9999999999999999999963 233444588899999999999999999999999999999999977776666666666


Q ss_pred             EEEEcCC
Q psy17610        299 SAAYHPS  305 (515)
Q Consensus       299 ~~~~~~~  305 (515)
                      .+.+.++
T Consensus       336 ~il~~~~  342 (412)
T KOG3881|consen  336 FILLRDD  342 (412)
T ss_pred             EEEecCC
Confidence            6666554

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=99.72  E-value=2.9e-13  Score=119.02  Aligned_cols=263  Identities=11%  Similarity=0.085  Sum_probs=177.3

Q ss_pred             ceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec----------CCcEEEEeCCCCceeEEEEecCe-----
Q psy17610        103 CEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS----------KNDIRIWSVRTLNELLRISVMNM-----  167 (515)
Q Consensus       103 ~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~----------d~~i~iw~~~~~~~~~~~~~~~~-----  167 (515)
                      ++|.+.|.++++.+..+..+....  .+ ++||++.+++++.          +..|.+||..+++.+.++.....     
T Consensus        27 ~~v~ViD~~~~~v~g~i~~G~~P~--~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~  103 (352)
T TIGR02658        27 TQVYTIDGEAGRVLGMTDGGFLPN--PV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLV  103 (352)
T ss_pred             ceEEEEECCCCEEEEEEEccCCCc--ee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhc
Confidence            799999999966555555443333  24 9999999988877          67899999999999988875332     


Q ss_pred             --EEEEEEEeeCCCEEEEEe-C-CCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCce
Q psy17610        168 --ICACIVFTYDGKAILSGW-N-DGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQ  243 (515)
Q Consensus       168 --~v~~~~~~~~~~~l~~~~-~-dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~  243 (515)
                        ....++++|||++|++.. . +..|.+.|+.+++.+.++..+  ....-...+++..+  +-+.||......+.....
T Consensus       104 ~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp--~~~~vy~t~e~~~~--~~~~Dg~~~~v~~d~~g~  179 (352)
T TIGR02658       104 GTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVP--DCYHIFPTANDTFF--MHCRDGSLAKVGYGTKGN  179 (352)
T ss_pred             cCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCC--CCcEEEEecCCccE--EEeecCceEEEEecCCCc
Confidence              224789999999999776 3 689999999999999888532  22222223222222  223445554444432221


Q ss_pred             eeEEeecc-cc--CceE-EEEEec-CCCEEEEEeCCCcEEEEEcccc-----eEEEEEE--------cCccEEEEEEcCC
Q psy17610        244 SLQCVLKE-HT--SSVS-VIQIKS-DSKEAMSASTDGTCVLWDLIKS-----TRLIIMI--------LPSMIMSAAYHPS  305 (515)
Q Consensus       244 ~~~~~~~~-~~--~~v~-~~~~~~-~~~~l~~~~~d~~i~iwd~~~~-----~~~~~~~--------~~~~~~~~~~~~~  305 (515)
                      ......+- +.  .++. .-.+.+ ++++++...+ |+|.+.|+...     +....+.        .+....-++++|+
T Consensus       180 ~~~~~~~vf~~~~~~v~~rP~~~~~dg~~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~d  258 (352)
T TIGR02658       180 PKIKPTEVFHPEDEYLINHPAYSNKSGRLVWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRA  258 (352)
T ss_pred             eEEeeeeeecCCccccccCCceEcCCCcEEEEecC-CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCC
Confidence            11111110 11  0100 003455 7777766666 99999996432     2222221        1223445999999


Q ss_pred             CcEEEEEE----------CCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCC-EEEEEc-CCCeEEEEEccCCeeee
Q psy17610        306 EVQLITCS----------TNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGK-YFLTGG-ADQIVKMWMYREGVPCF  373 (515)
Q Consensus       306 ~~~l~~~~----------~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~-~dg~i~i~d~~~~~~~~  373 (515)
                      ++++++..          ..+.|.++|..+++.+..+...  ..+..++++||++ +|++.. .++.|.++|..+++.+.
T Consensus       259 g~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~vG--~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~i~  336 (352)
T TIGR02658       259 RDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIELG--HEIDSINVSQDAKPLLYALSTGDKTLYIFDAETGKELS  336 (352)
T ss_pred             CCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeCC--CceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCeEEe
Confidence            99988843          2257999999999999999876  5788999999999 777666 57889999999998888


Q ss_pred             ec
Q psy17610        374 VG  375 (515)
Q Consensus       374 ~~  375 (515)
                      ..
T Consensus       337 ~i  338 (352)
T TIGR02658       337 SV  338 (352)
T ss_pred             ee
Confidence            76

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.71  E-value=4.3e-15  Score=139.32  Aligned_cols=234  Identities=14%  Similarity=0.116  Sum_probs=157.8

Q ss_pred             ceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec---CCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCC
Q psy17610        103 CEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS---KNDIRIWSVRTLNELLRISVMNMICACIVFTYDGK  179 (515)
Q Consensus       103 ~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~---d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~  179 (515)
                      ..|++||... .....+. .+...+.+.+|+|||+.|+.++.   +..|.+||+.+++.. .+........+..|+|||+
T Consensus       184 ~~l~i~D~~g-~~~~~lt-~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~-~l~~~~g~~~~~~~SpDG~  260 (433)
T PRK04922        184 YALQVADSDG-YNPQTIL-RSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRE-LVASFRGINGAPSFSPDGR  260 (433)
T ss_pred             EEEEEECCCC-CCceEee-cCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEE-EeccCCCCccCceECCCCC
Confidence            4699999875 3444333 36778999999999999998875   346999999887653 3333344456789999999


Q ss_pred             EEEE-EeCCC--eEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecC-CCc--EEEEEccCCceeeEEeecccc
Q psy17610        180 AILS-GWNDG--FIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGG-EGQ--VRIWKLTRESQSLQCVLKEHT  253 (515)
Q Consensus       180 ~l~~-~~~dg--~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~--i~iw~~~~~~~~~~~~~~~~~  253 (515)
                      .++. .+.+|  .|.+||+.+++....  ..+.......+|+|+|+.|+..+. +|.  |.++++.......+   ..+.
T Consensus       261 ~l~~~~s~~g~~~Iy~~d~~~g~~~~l--t~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~l---t~~g  335 (433)
T PRK04922        261 RLALTLSRDGNPEIYVMDLGSRQLTRL--TNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAERL---TFQG  335 (433)
T ss_pred             EEEEEEeCCCCceEEEEECCCCCeEEC--ccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEEe---ecCC
Confidence            8764 45555  599999998876543  344445567899999998887653 444  55556543322222   1222


Q ss_pred             CceEEEEEecCCCEEEEEeCCC---cEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECC---CeEEEEeCCCCc
Q psy17610        254 SSVSVIQIKSDSKEAMSASTDG---TCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTN---KMIDYWETCDGS  327 (515)
Q Consensus       254 ~~v~~~~~~~~~~~l~~~~~d~---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~i~~~d~~~~~  327 (515)
                      ......+|+|+|++++..+.++   .|.+||+.+++... +..........|+|+++.++..+.+   +.|.++++. +.
T Consensus       336 ~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~~-Lt~~~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~-g~  413 (433)
T PRK04922        336 NYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVRT-LTPGSLDESPSFAPNGSMVLYATREGGRGVLAAVSTD-GR  413 (433)
T ss_pred             CCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeEE-CCCCCCCCCceECCCCCEEEEEEecCCceEEEEEECC-CC
Confidence            3345689999999998766543   59999998776553 3333344567899999998876653   468888874 44


Q ss_pred             eEEEEecCCCccEEEEEEcC
Q psy17610        328 IIRSLEGSDVAAVNCVDFVD  347 (515)
Q Consensus       328 ~~~~~~~~~~~~i~~~~~~~  347 (515)
                      ....+..+. +.+...+|+|
T Consensus       414 ~~~~l~~~~-g~~~~p~wsp  432 (433)
T PRK04922        414 VRQRLVSAD-GEVREPAWSP  432 (433)
T ss_pred             ceEEcccCC-CCCCCCccCC
Confidence            445554432 4556667765

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.71  E-value=6.3e-15  Score=137.66  Aligned_cols=236  Identities=13%  Similarity=0.102  Sum_probs=157.0

Q ss_pred             ceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecC---CcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCC
Q psy17610        103 CEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSK---NDIRIWSVRTLNELLRISVMNMICACIVFTYDGK  179 (515)
Q Consensus       103 ~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d---~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~  179 (515)
                      ..|.++|.+. .....+. .+...+.+.+|+|||+.|+.++.+   ..|.+||+.+++.. .+....+......|+|||+
T Consensus       176 ~~L~~~D~dG-~~~~~l~-~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~-~l~~~~g~~~~~~~SPDG~  252 (427)
T PRK02889        176 YQLQISDADG-QNAQSAL-SSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRR-VVANFKGSNSAPAWSPDGR  252 (427)
T ss_pred             cEEEEECCCC-CCceEec-cCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEE-EeecCCCCccceEECCCCC
Confidence            4688888754 3433333 477889999999999999887753   35999999988654 3443445567889999999


Q ss_pred             EEEE-EeCCCeEEEE--ecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecC-CCcEEEEEccCCceeeEEeeccccCc
Q psy17610        180 AILS-GWNDGFIRCF--TPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGG-EGQVRIWKLTRESQSLQCVLKEHTSS  255 (515)
Q Consensus       180 ~l~~-~~~dg~i~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~  255 (515)
                      .|+. .+.+|...+|  |+.++.. ..+ ..+........|+|||+.|+..+. ++...+|.++......... ..+...
T Consensus       253 ~la~~~~~~g~~~Iy~~d~~~~~~-~~l-t~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~l-t~~g~~  329 (427)
T PRK02889        253 TLAVALSRDGNSQIYTVNADGSGL-RRL-TQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQRV-TFTGSY  329 (427)
T ss_pred             EEEEEEccCCCceEEEEECCCCCc-EEC-CCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEEE-ecCCCC
Confidence            8874 5667765555  5555543 333 345555667899999998886554 4667777664332222211 112233


Q ss_pred             eEEEEEecCCCEEEEEeCCC---cEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCC---eEEEEeCCCCceE
Q psy17610        256 VSVIQIKSDSKEAMSASTDG---TCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNK---MIDYWETCDGSII  329 (515)
Q Consensus       256 v~~~~~~~~~~~l~~~~~d~---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~i~~~d~~~~~~~  329 (515)
                      .....|+|+|++++..+.++   .|.+||+.+++..... .........|+|+++.++....++   .+.+.+. ++...
T Consensus       330 ~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~~lt-~~~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~-~g~~~  407 (427)
T PRK02889        330 NTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVTALT-DTTRDESPSFAPNGRYILYATQQGGRSVLAAVSS-DGRIK  407 (427)
T ss_pred             cCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeEEcc-CCCCccCceECCCCCEEEEEEecCCCEEEEEEEC-CCCce
Confidence            44678999999998877654   5999999887654433 233446789999999998877543   3666666 45555


Q ss_pred             EEEecCCCccEEEEEEcC
Q psy17610        330 RSLEGSDVAAVNCVDFVD  347 (515)
Q Consensus       330 ~~~~~~~~~~i~~~~~~~  347 (515)
                      ..+..+. +.+...+|+|
T Consensus       408 ~~l~~~~-g~~~~p~wsp  424 (427)
T PRK02889        408 QRLSVQG-GDVREPSWGP  424 (427)
T ss_pred             EEeecCC-CCCCCCccCC
Confidence            5555433 5566677776

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=99.71  E-value=4.4e-14  Score=123.42  Aligned_cols=357  Identities=12%  Similarity=0.071  Sum_probs=235.4

Q ss_pred             EEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEe
Q psy17610        106 FLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGW  185 (515)
Q Consensus       106 ~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  185 (515)
                      ..|+..+ ...........-++..++|||.|.+|++... ..|.+|.-..+..+.++.  ...|..+.|+|++++|.+-+
T Consensus        15 ~f~~~~s-~~~~~~~~~~~~p~~~~~~SP~G~~l~~~~~-~~V~~~~g~~~~~l~~~~--~~~V~~~~fSP~~kYL~tw~   90 (561)
T COG5354          15 VFWNSQS-EVIHTRFESENWPVAYVSESPLGTYLFSEHA-AGVECWGGPSKAKLVRFR--HPDVKYLDFSPNEKYLVTWS   90 (561)
T ss_pred             EeecCcc-ccccccccccCcchhheeecCcchheehhhc-cceEEccccchhheeeee--cCCceecccCcccceeeeec
Confidence            3455554 3344444446678999999999987777655 458999988877666554  34578899999999999876


Q ss_pred             CCC---------------eEEEEecCCCceEEEecCCCCCC--eE-EEEEcCCCCEEEEecCCCcEEEEEccCCcee--e
Q psy17610        186 NDG---------------FIRCFTPQSGKLKFIIPNAHNRG--VT-ALAITQDGTRLLSGGGEGQVRIWKLTRESQS--L  245 (515)
Q Consensus       186 ~dg---------------~i~~~~~~~~~~~~~~~~~~~~~--v~-~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~--~  245 (515)
                      ..+               .+.+||..+|..+..+. ....+  .. -+.|+-+..++|-.. ...+.++++. ....  .
T Consensus        91 ~~pi~~pe~e~sp~~~~n~~~vwd~~sg~iv~sf~-~~~q~~~~Wp~~k~s~~D~y~ARvv-~~sl~i~e~t-~n~~~~p  167 (561)
T COG5354          91 REPIIEPEIEISPFTSKNNVFVWDIASGMIVFSFN-GISQPYLGWPVLKFSIDDKYVARVV-GSSLYIHEIT-DNIEEHP  167 (561)
T ss_pred             cCCccChhhccCCccccCceeEEeccCceeEeecc-ccCCcccccceeeeeecchhhhhhc-cCeEEEEecC-CccccCc
Confidence            533               48999999999998874 33333  23 678888877776442 2469999962 2221  1


Q ss_pred             EEeeccccCceEEEEEecCCC--EEEE-----EeCCCcEEEEEcccceEEEEEEcC-ccEEEEEEcCCCcEEEEEE----
Q psy17610        246 QCVLKEHTSSVSVIQIKSDSK--EAMS-----ASTDGTCVLWDLIKSTRLIIMILP-SMIMSAAYHPSEVQLITCS----  313 (515)
Q Consensus       246 ~~~~~~~~~~v~~~~~~~~~~--~l~~-----~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~----  313 (515)
                      ...+  ....|....++|.++  .|+.     ....+++++|.+..+..+.....- ..-..+.|.+.|+++++-.    
T Consensus       168 ~~~l--r~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qLkW~~~g~~ll~l~~t~~  245 (561)
T COG5354         168 FKNL--RPVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQLKWQVLGKYLLVLVMTHT  245 (561)
T ss_pred             hhhc--cccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeecccEEEEecCCceEEEEEEEee
Confidence            1111  135677888888643  2332     355788999998866655544322 2345678888888776421    


Q ss_pred             -------CCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEE--cCCCeEEEEEccCCeeeeeccCCCCCeeE
Q psy17610        314 -------TNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTG--GADQIVKMWMYREGVPCFVGIGHAASITK  384 (515)
Q Consensus       314 -------~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~--~~dg~i~i~d~~~~~~~~~~~~~~~~i~~  384 (515)
                             ....++++++......... . ..++|...+|.|.++.+++.  -.+-.+.++|++.. ....+  ....=..
T Consensus       246 ksnKsyfgesnLyl~~~~e~~i~V~~-~-~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N-l~~~~--Pe~~rNT  320 (561)
T COG5354         246 KSNKSYFGESNLYLLRITERSIPVEK-D-LKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN-LRFYF--PEQKRNT  320 (561)
T ss_pred             ecccceeccceEEEEeecccccceec-c-ccccceeeeecccCCceeEEecccccceeecccccc-eEEec--CCccccc
Confidence                   1346788888744443333 2 23899999999988876654  46778999999766 33333  3344467


Q ss_pred             EEECCCCcEEEEEeCC---CcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEee-
Q psy17610        385 IKISPDKKVIVSVSAD---GGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCS-  460 (515)
Q Consensus       385 ~~~~~~~~~l~~~~~d---g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-  460 (515)
                      +.|+|.+++++.++-|   |.+.+|+....-...                     .........-+.|+||++++.+.. 
T Consensus       321 ~~fsp~~r~il~agF~nl~gni~i~~~~~rf~~~---------------------~~~~~~n~s~~~wspd~qF~~~~~t  379 (561)
T COG5354         321 IFFSPHERYILFAGFDNLQGNIEIFDPAGRFKVA---------------------GAFNGLNTSYCDWSPDGQFYDTDTT  379 (561)
T ss_pred             ccccCcccEEEEecCCccccceEEeccCCceEEE---------------------EEeecCCceEeeccCCceEEEecCC
Confidence            8899999999998764   679999875432100                     001112245578999999887764 


Q ss_pred             -----cCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCC
Q psy17610        461 -----TNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQ  506 (515)
Q Consensus       461 -----~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg  506 (515)
                           .|..+.|||+.....         ...+.+.|.|.|++..+.+.+.
T Consensus       380 s~k~~~Dn~i~l~~v~g~~~---------fel~~~~W~p~~~~~ttsSs~~  421 (561)
T COG5354         380 SEKLRVDNSIKLWDVYGAKV---------FELTNITWDPSGQYVTTSSSCP  421 (561)
T ss_pred             CcccccCcceEEEEecCchh---------hhhhhccccCCcccceeeccCC
Confidence                 367799999854322         2456677888777766665544

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.71  E-value=2e-14  Score=135.12  Aligned_cols=233  Identities=10%  Similarity=0.027  Sum_probs=162.7

Q ss_pred             CcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeC---CCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCC
Q psy17610        146 NDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWN---DGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGT  222 (515)
Q Consensus       146 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  222 (515)
                      ..|.++|.+ +...+.+..+...+...+|+|||+.|+..+.   +..|.+||+.+++....  ..+...+...+|+|||+
T Consensus       182 ~~l~~~d~d-g~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~~l--~~~~g~~~~~~~SPDG~  258 (435)
T PRK05137        182 KRLAIMDQD-GANVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRELV--GNFPGMTFAPRFSPDGR  258 (435)
T ss_pred             eEEEEECCC-CCCcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEEEe--ecCCCcccCcEECCCCC
Confidence            368888875 4555667778888999999999999987764   46899999998876433  34556677899999999


Q ss_pred             EEE-EecCCCc--EEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeC-CC--cEEEEEcccceEEEEEEcCcc
Q psy17610        223 RLL-SGGGEGQ--VRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST-DG--TCVLWDLIKSTRLIIMILPSM  296 (515)
Q Consensus       223 ~l~-~~~~d~~--i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~--~i~iwd~~~~~~~~~~~~~~~  296 (515)
                      .|+ +.+.++.  |.+||+....  . ..+..+........|+|||+.++..+. +|  .|.++|+..++..........
T Consensus       259 ~la~~~~~~g~~~Iy~~d~~~~~--~-~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~~lt~~~~~  335 (435)
T PRK05137        259 KVVMSLSQGGNTDIYTMDLRSGT--T-TRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPRRISFGGGR  335 (435)
T ss_pred             EEEEEEecCCCceEEEEECCCCc--e-EEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeEEeecCCCc
Confidence            876 4555555  6666775332  2 334445556677899999999887764 33  688889877665554444455


Q ss_pred             EEEEEEcCCCcEEEEEECC---CeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCC------CeEEEEEcc
Q psy17610        297 IMSAAYHPSEVQLITCSTN---KMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGAD------QIVKMWMYR  367 (515)
Q Consensus       297 ~~~~~~~~~~~~l~~~~~~---~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d------g~i~i~d~~  367 (515)
                      .....|+|+++.++....+   ..|.+||+..+.. ..+...  ..+....|+|||+.|+..+.+      ..+.++|+.
T Consensus       336 ~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~-~~lt~~--~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~  412 (435)
T PRK05137        336 YSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSGE-RILTSG--FLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLT  412 (435)
T ss_pred             ccCeEECCCCCEEEEEEcCCCceEEEEEECCCCce-EeccCC--CCCCCCeECCCCCEEEEEEccCCCCCcceEEEEECC
Confidence            6678899999999887653   3688889765543 333322  345678999999998765442      357888886


Q ss_pred             CCeeeeeccCCCCCeeEEEECC
Q psy17610        368 EGVPCFVGIGHAASITKIKISP  389 (515)
Q Consensus       368 ~~~~~~~~~~~~~~i~~~~~~~  389 (515)
                      .+.. ..+. ....+...+|+|
T Consensus       413 g~~~-~~l~-~~~~~~~p~Wsp  432 (435)
T PRK05137        413 GRNE-REVP-TPGDASDPAWSP  432 (435)
T ss_pred             CCce-EEcc-CCCCccCcccCC
Confidence            6544 3443 344567777876

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=99.70  E-value=4e-12  Score=115.44  Aligned_cols=290  Identities=16%  Similarity=0.221  Sum_probs=185.0

Q ss_pred             EEEEecC----ceEEEEEC--CCCceeEEee-ccCccCeEEEEeCCCCcEEEEEec----CCcEEEEeCCCC--c--eeE
Q psy17610         96 VFVGTVN----CEIFLIDM--NSGFTLTLVN-TCHTSAIYDLQFPVNFSSVFATCS----KNDIRIWSVRTL--N--ELL  160 (515)
Q Consensus        96 l~~~~~d----~~i~iw~~--~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~~~~~----d~~i~iw~~~~~--~--~~~  160 (515)
                      +++|+..    +.|.+|++  +++ .+.... .........++++|++++|+++..    ++.|..|++...  +  .+.
T Consensus         2 ~~vgsy~~~~~~gI~~~~~d~~~g-~l~~~~~~~~~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~   80 (345)
T PF10282_consen    2 LYVGSYTNGKGGGIYVFRFDEETG-TLTLVQTVAEGENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLN   80 (345)
T ss_dssp             EEEEECCSSSSTEEEEEEEETTTT-EEEEEEEEEESSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEE
T ss_pred             EEEEcCCCCCCCcEEEEEEcCCCC-CceEeeeecCCCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEee
Confidence            4455554    68888888  443 222221 123345677899999999999987    468988888764  2  233


Q ss_pred             EEEecCeEEEEEEEeeCCCEEEEEe-CCCeEEEEecCC-CceEEE---ec---------CCCCCCeEEEEEcCCCCEEEE
Q psy17610        161 RISVMNMICACIVFTYDGKAILSGW-NDGFIRCFTPQS-GKLKFI---IP---------NAHNRGVTALAITQDGTRLLS  226 (515)
Q Consensus       161 ~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~~~~~-~~~~~~---~~---------~~~~~~v~~~~~~~~~~~l~~  226 (515)
                      +..........++++|++++|+++. .+|.+.++++.. +.....   ..         ........++.++|+++++++
T Consensus        81 ~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v  160 (345)
T PF10282_consen   81 SVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYV  160 (345)
T ss_dssp             EEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEE
T ss_pred             eeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEE
Confidence            3333334456789999999999886 489999999987 443322   10         112345789999999998887


Q ss_pred             ec-CCCcEEEEEccCCceee--EEeec-cccCceEEEEEecCCCEEEEEeC-CCcEEEEEcc--cce--EEEEEEcC---
Q psy17610        227 GG-GEGQVRIWKLTRESQSL--QCVLK-EHTSSVSVIQIKSDSKEAMSAST-DGTCVLWDLI--KST--RLIIMILP---  294 (515)
Q Consensus       227 ~~-~d~~i~iw~~~~~~~~~--~~~~~-~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iwd~~--~~~--~~~~~~~~---  294 (515)
                      .. ....|.+|+++.....+  ...+. ......+.+.|+|++++++...+ +++|.++++.  ++.  .......-   
T Consensus       161 ~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~  240 (345)
T PF10282_consen  161 PDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEG  240 (345)
T ss_dssp             EETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETT
T ss_pred             EecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeecccc
Confidence            53 33579999997655322  22221 23445688999999998876655 6789999988  332  22333211   


Q ss_pred             ----ccEEEEEEcCCCcEEEEEEC-CCeEEEEeCC--CCc--eEEEEecCCCccEEEEEEcCCCCEEEEEc-CCCeEEEE
Q psy17610        295 ----SMIMSAAYHPSEVQLITCST-NKMIDYWETC--DGS--IIRSLEGSDVAAVNCVDFVDDGKYFLTGG-ADQIVKMW  364 (515)
Q Consensus       295 ----~~~~~~~~~~~~~~l~~~~~-~~~i~~~d~~--~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~  364 (515)
                          .....++++|++++|+++.. .+.|.+|++.  +++  .+..+.... ...+.++++|+|++|+++. .++.|.+|
T Consensus       241 ~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G-~~Pr~~~~s~~g~~l~Va~~~s~~v~vf  319 (345)
T PF10282_consen  241 FTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGG-KFPRHFAFSPDGRYLYVANQDSNTVSVF  319 (345)
T ss_dssp             SCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESS-SSEEEEEE-TTSSEEEEEETTTTEEEEE
T ss_pred             ccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCC-CCccEEEEeCCCCEEEEEecCCCeEEEE
Confidence                14788999999999888765 6789999983  233  333344322 4578999999999999886 46789999


Q ss_pred             Ec--cCCeeeeecc-CCCCCeeEEEE
Q psy17610        365 MY--REGVPCFVGI-GHAASITKIKI  387 (515)
Q Consensus       365 d~--~~~~~~~~~~-~~~~~i~~~~~  387 (515)
                      ++  ++|.+...-. ..-....|+.|
T Consensus       320 ~~d~~tG~l~~~~~~~~~~~p~ci~f  345 (345)
T PF10282_consen  320 DIDPDTGKLTPVGSSVPIPSPVCIVF  345 (345)
T ss_dssp             EEETTTTEEEEEEEEEESSSEEEEEE
T ss_pred             EEeCCCCcEEEecccccCCCCEEEeC
Confidence            76  4565443321 12234455554

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>KOG3881|consensus

Probab=99.69  E-value=6.5e-15  Score=124.17  Aligned_cols=242  Identities=13%  Similarity=0.192  Sum_probs=175.8

Q ss_pred             CeEEEEEEEeeCCC--EEEEEeCCCeEEEEecCCCceEEEe-----cCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEc
Q psy17610        166 NMICACIVFTYDGK--AILSGWNDGFIRCFTPQSGKLKFII-----PNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKL  238 (515)
Q Consensus       166 ~~~v~~~~~~~~~~--~l~~~~~dg~i~~~~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~  238 (515)
                      ...++.++|..+++  .+...+.+..+..+.+.........     ......+|..++.. + ..|++|-.+|.+.+|..
T Consensus        55 ~~ris~l~~~~d~~tevl~~r~~~~~~~~~~~~E~~~~s~~~~~~~~~l~~~~I~gl~~~-d-g~Litc~~sG~l~~~~~  132 (412)
T KOG3881|consen   55 LDRISSLLFGVDGETEVLNARSADDDLPKFVIEEFEISSSLDDAKTVSLGTKSIKGLKLA-D-GTLITCVSSGNLQVRHD  132 (412)
T ss_pred             hhhhhhheeecCCceeEeeccccCcccccccccCCccccccccccccccccccccchhhc-C-CEEEEEecCCcEEEEec
Confidence            34566666765543  3333335555666665554443332     12344556666654 3 36788888999999998


Q ss_pred             cCCc--eeeEEeeccccCceEEEEEecCCCE-EEEEeCC--CcEEEEEcccceEEEEEE----------cCccEEEEEEc
Q psy17610        239 TRES--QSLQCVLKEHTSSVSVIQIKSDSKE-AMSASTD--GTCVLWDLIKSTRLIIMI----------LPSMIMSAAYH  303 (515)
Q Consensus       239 ~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d--~~i~iwd~~~~~~~~~~~----------~~~~~~~~~~~  303 (515)
                      ..+.  ......+..+ ..+..+.-++.... +++|+..  ..+.+||++..+.+..-.          .|-.++.+.|-
T Consensus       133 k~~d~hss~l~~la~g-~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl  211 (412)
T KOG3881|consen  133 KSGDLHSSKLIKLATG-PGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRFL  211 (412)
T ss_pred             cCCccccccceeeecC-CceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCCCccccceeeeeeccceec
Confidence            6332  2222223322 34455555554444 5558888  789999998886554432          23347788898


Q ss_pred             CC--CcEEEEEECCCeEEEEeCCCCc-eEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeee-ccCCC
Q psy17610        304 PS--EVQLITCSTNKMIDYWETCDGS-IIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFV-GIGHA  379 (515)
Q Consensus       304 ~~--~~~l~~~~~~~~i~~~d~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~  379 (515)
                      +.  ...|++++.-+.+++||.+.++ ++..+.... .+++++...|+++++++|..-|.+..||++.++.... +.+..
T Consensus       212 ~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E-~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~t  290 (412)
T KOG3881|consen  212 EGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLE-NPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGIT  290 (412)
T ss_pred             CCCCCceEEEEecceeEEEecCcccCcceeEecccc-CcceeeeecCCCcEEEEecccchhheecccCceeeccccCCcc
Confidence            87  8899999999999999998764 556666554 8999999999999999999999999999999988876 88999


Q ss_pred             CCeeEEEECCCCcEEEEEeCCCcEEEEeCCCC
Q psy17610        380 ASITKIKISPDKKVIVSVSADGGIFLWTFPEL  411 (515)
Q Consensus       380 ~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  411 (515)
                      +.|+++..+|..++|++++-|..++|+|+.+.
T Consensus       291 Gsirsih~hp~~~~las~GLDRyvRIhD~ktr  322 (412)
T KOG3881|consen  291 GSIRSIHCHPTHPVLASCGLDRYVRIHDIKTR  322 (412)
T ss_pred             CCcceEEEcCCCceEEeeccceeEEEeecccc
Confidence            99999999999999999999999999999874

>KOG2394|consensus

Probab=99.69  E-value=5.2e-16  Score=135.97  Aligned_cols=170  Identities=19%  Similarity=0.333  Sum_probs=131.8

Q ss_pred             ecCCCEEEEEecCceEEEEECCCCceeEEeec----cCccCeEEEEeCCCCcEE-EEEecCCcEEEEeCCC---------
Q psy17610         90 NPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNT----CHTSAIYDLQFPVNFSSV-FATCSKNDIRIWSVRT---------  155 (515)
Q Consensus        90 s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~----~h~~~v~~~~~~~~~~~l-~~~~~d~~i~iw~~~~---------  155 (515)
                      .|++--|++|-..|.+.+.|... +...+.+.    -.+..|+++.|-|.++.+ +++-.+|.+.++|.+-         
T Consensus       182 ~~~g~dllIGf~tGqvq~idp~~-~~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~  260 (636)
T KOG2394|consen  182 TPKGLDLLIGFTTGQVQLIDPIN-FEVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSY  260 (636)
T ss_pred             CCCCcceEEeeccCceEEecchh-hHHHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcc
Confidence            34566788888889999998765 33222211    134689999998865544 4445589999997542         


Q ss_pred             -----C--------------ceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEE
Q psy17610        156 -----L--------------NELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALA  216 (515)
Q Consensus       156 -----~--------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~  216 (515)
                           +              .++..+....+.|...+|+|||++||+.+.||.++|||..+.+++... +.--+...|++
T Consensus       261 ~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~m-kSYFGGLLCvc  339 (636)
T KOG2394|consen  261 QALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVM-KSYFGGLLCVC  339 (636)
T ss_pred             cccCCCCeeEEeeeeccccCCccceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHH-HhhccceEEEE
Confidence                 1              122333344557889999999999999999999999999998877665 45567899999


Q ss_pred             EcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEec
Q psy17610        217 ITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKS  263 (515)
Q Consensus       217 ~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~  263 (515)
                      |+|||++|++|++|-.|.||.+  ...+.+..-++|.+.|..++|.|
T Consensus       340 WSPDGKyIvtGGEDDLVtVwSf--~erRVVARGqGHkSWVs~VaFDp  384 (636)
T KOG2394|consen  340 WSPDGKYIVTGGEDDLVTVWSF--EERRVVARGQGHKSWVSVVAFDP  384 (636)
T ss_pred             EcCCccEEEecCCcceEEEEEe--ccceEEEeccccccceeeEeecc
Confidence            9999999999999999999999  56677888899999999999983

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.68  E-value=9.7e-15  Score=119.50  Aligned_cols=147  Identities=16%  Similarity=0.279  Sum_probs=106.2

Q ss_pred             EEEEEcCCCCEEEEEcC----------CCeEEEEEccC-Ceeeeecc-CCCCCeeEEEECCCCcEEEEEe--CCCcEEEE
Q psy17610        341 NCVDFVDDGKYFLTGGA----------DQIVKMWMYRE-GVPCFVGI-GHAASITKIKISPDKKVIVSVS--ADGGIFLW  406 (515)
Q Consensus       341 ~~~~~~~~~~~l~~~~~----------dg~i~i~d~~~-~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~--~dg~i~iw  406 (515)
                      ..+.|+|+|++|++-..          -+...+|.++. +.+...+. ...++|.+++|+|+++.+++..  .+..+.+|
T Consensus         9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~ly   88 (194)
T PF08662_consen    9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLY   88 (194)
T ss_pred             EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEE
Confidence            35789999988775433          13455565532 23333332 2345799999999999876653  56799999


Q ss_pred             eCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeec---CCeEEEEecCCCeeeeeecccc
Q psy17610        407 TFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCST---NKMIDYWETCDGSIIRSLEGSD  483 (515)
Q Consensus       407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~---dg~v~iwd~~~~~~~~~~~~~~  483 (515)
                      |++...                       ........+..+.|+|+|++|++++.   .|.|.+||+.+.+.+...+.  
T Consensus        89 d~~~~~-----------------------i~~~~~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~~--  143 (194)
T PF08662_consen   89 DVKGKK-----------------------IFSFGTQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFEH--  143 (194)
T ss_pred             cCcccE-----------------------eEeecCCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeecccc--
Confidence            985211                       01112244778999999999998864   46799999998888877664  


Q ss_pred             cceEEEEEEcCCCcEEEEeec------CCeEEEEEE
Q psy17610        484 VAAVNCVDFVDDGKYFLTGGA------DQIVKICLY  513 (515)
Q Consensus       484 ~~~v~~~~~s~~~~~l~s~~~------dg~v~iw~~  513 (515)
                       ..++.++|+|||++|+++..      |..++||+|
T Consensus       144 -~~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~  178 (194)
T PF08662_consen  144 -SDATDVEWSPDGRYLATATTSPRLRVDNGFKIWSF  178 (194)
T ss_pred             -CcEEEEEEcCCCCEEEEEEeccceeccccEEEEEe
Confidence             45789999999999999874      788999997

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.67  E-value=1.9e-14  Score=117.77  Aligned_cols=148  Identities=14%  Similarity=0.255  Sum_probs=110.0

Q ss_pred             EEEEEecCCCEEEEEec----------CceEEEEEC--CCCceeEEeeccCccCeEEEEeCCCCcEEEEEe--cCCcEEE
Q psy17610         85 SSLQYNPVNNKVFVGTV----------NCEIFLIDM--NSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATC--SKNDIRI  150 (515)
Q Consensus        85 ~~~~~s~~~~~l~~~~~----------d~~i~iw~~--~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~--~d~~i~i  150 (515)
                      ..+.|+|+|++|++-..          -+...+|.+  .+ .....+.....++|.+++|+|+|+.+++..  .+..|.+
T Consensus         9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~-~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~l   87 (194)
T PF08662_consen    9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKN-IPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTL   87 (194)
T ss_pred             EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCC-CccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEE
Confidence            45788888888776433          133445544  33 233333333556799999999999887664  3679999


Q ss_pred             EeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeC---CCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEe
Q psy17610        151 WSVRTLNELLRISVMNMICACIVFTYDGKAILSGWN---DGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSG  227 (515)
Q Consensus       151 w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  227 (515)
                      ||++ ++.+..+.  ...+..+.|+|+|++|++++.   .|.+.+||.++.+.+...  .| ..++.++|+|+|++|+++
T Consensus        88 yd~~-~~~i~~~~--~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~--~~-~~~t~~~WsPdGr~~~ta  161 (194)
T PF08662_consen   88 YDVK-GKKIFSFG--TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTF--EH-SDATDVEWSPDGRYLATA  161 (194)
T ss_pred             EcCc-ccEeEeec--CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeecc--cc-CcEEEEEEcCCCCEEEEE
Confidence            9996 66666654  556788999999999998874   467999999988887765  33 357899999999999988


Q ss_pred             cC------CCcEEEEEcc
Q psy17610        228 GG------EGQVRIWKLT  239 (515)
Q Consensus       228 ~~------d~~i~iw~~~  239 (515)
                      ..      |..++||+..
T Consensus       162 ~t~~r~~~dng~~Iw~~~  179 (194)
T PF08662_consen  162 TTSPRLRVDNGFKIWSFQ  179 (194)
T ss_pred             EeccceeccccEEEEEec
Confidence            64      6789999984

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=99.65  E-value=1.4e-11  Score=108.52  Aligned_cols=241  Identities=10%  Similarity=0.016  Sum_probs=158.7

Q ss_pred             EecCCCEEEEEec----------CceEEEEECCCCceeEEeeccCc------cCeEEEEeCCCCcEEEEEe-c-CCcEEE
Q psy17610         89 YNPVNNKVFVGTV----------NCEIFLIDMNSGFTLTLVNTCHT------SAIYDLQFPVNFSSVFATC-S-KNDIRI  150 (515)
Q Consensus        89 ~s~~~~~l~~~~~----------d~~i~iw~~~~~~~~~~~~~~h~------~~v~~~~~~~~~~~l~~~~-~-d~~i~i  150 (515)
                      +||||+.|+++..          +..|.+||..+.+....+..+..      ..-..++++|||++|++.. . +..|.+
T Consensus        53 ~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~V  132 (352)
T TIGR02658        53 VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGV  132 (352)
T ss_pred             ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEE
Confidence            8999999888765          67999999999766655543211      1234788999999999877 3 789999


Q ss_pred             EeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCC-Cce-EEEecCCCC--CCeE-EEEEcC-CCCEE
Q psy17610        151 WSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQS-GKL-KFIIPNAHN--RGVT-ALAITQ-DGTRL  224 (515)
Q Consensus       151 w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~-~~~-~~~~~~~~~--~~v~-~~~~~~-~~~~l  224 (515)
                      .|+.+++.+.++...... .-...+++.. + +-+.||......+.+ |+. ....+..+.  .++. .-.|.+ +|+++
T Consensus       133 vD~~~~kvv~ei~vp~~~-~vy~t~e~~~-~-~~~~Dg~~~~v~~d~~g~~~~~~~~vf~~~~~~v~~rP~~~~~dg~~~  209 (352)
T TIGR02658       133 VDLEGKAFVRMMDVPDCY-HIFPTANDTF-F-MHCRDGSLAKVGYGTKGNPKIKPTEVFHPEDEYLINHPAYSNKSGRLV  209 (352)
T ss_pred             EECCCCcEEEEEeCCCCc-EEEEecCCcc-E-EEeecCceEEEEecCCCceEEeeeeeecCCccccccCCceEcCCCcEE
Confidence            999999999888754321 1122222221 1 222344433332221 211 111101011  0000 004455 78877


Q ss_pred             EEecCCCcEEEEEccCCceeeEEeec----------cccCceEEEEEecCCCEEEEEe----------CCCcEEEEEccc
Q psy17610        225 LSGGGEGQVRIWKLTRESQSLQCVLK----------EHTSSVSVIQIKSDSKEAMSAS----------TDGTCVLWDLIK  284 (515)
Q Consensus       225 ~~~~~d~~i~iw~~~~~~~~~~~~~~----------~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~iwd~~~  284 (515)
                      .+..+ |.|.+.|+..........+.          -..+...-+++++++++++...          ..+.|.++|..+
T Consensus       210 ~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t  288 (352)
T TIGR02658       210 WPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKT  288 (352)
T ss_pred             EEecC-CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCC
Confidence            77666 99999996433222111111          1233445599999999988743          124799999999


Q ss_pred             ceEEEEEEcCccEEEEEEcCCCc-EEEEEE-CCCeEEEEeCCCCceEEEEe
Q psy17610        285 STRLIIMILPSMIMSAAYHPSEV-QLITCS-TNKMIDYWETCDGSIIRSLE  333 (515)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~-~~~~i~~~d~~~~~~~~~~~  333 (515)
                      .+.+..+.....+..++++||++ +|++.. .++.|.++|..+++.++++.
T Consensus       289 ~kvi~~i~vG~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~i~~i~  339 (352)
T TIGR02658       289 GKRLRKIELGHEIDSINVSQDAKPLLYALSTGDKTLYIFDAETGKELSSVN  339 (352)
T ss_pred             CeEEEEEeCCCceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCeEEeeec
Confidence            99999999999999999999999 777666 47889999999999999884

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=99.64  E-value=1.4e-12  Score=120.85  Aligned_cols=298  Identities=13%  Similarity=0.143  Sum_probs=192.9

Q ss_pred             CCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEE
Q psy17610         92 VNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICAC  171 (515)
Q Consensus        92 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~  171 (515)
                      .+..+++++.+|.|..+|..+|+.+-.... .......+..  ++..+++++.++.+..+|.++|+.+.+..........
T Consensus        64 ~~~~v~v~~~~g~v~a~d~~tG~~~W~~~~-~~~~~~~p~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~  140 (377)
T TIGR03300        64 AGGKVYAADADGTVVALDAETGKRLWRVDL-DERLSGGVGA--DGGLVFVGTEKGEVIALDAEDGKELWRAKLSSEVLSP  140 (377)
T ss_pred             ECCEEEEECCCCeEEEEEccCCcEeeeecC-CCCcccceEE--cCCEEEEEcCCCEEEEEECCCCcEeeeeccCceeecC
Confidence            367888999999999999999876544322 1111112222  4568888889999999999999998876643322221


Q ss_pred             EEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCe-----EEEEEcCCCCEEEEecCCCcEEEEEccCCceeeE
Q psy17610        172 IVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGV-----TALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQ  246 (515)
Q Consensus       172 ~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~  246 (515)
                      ...  .+..++.+..++.+..+|.++|+.+...... ....     .+...  .+..++.+..++.+..+|..++.....
T Consensus       141 p~v--~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~-~~~~~~~~~~sp~~--~~~~v~~~~~~g~v~ald~~tG~~~W~  215 (377)
T TIGR03300       141 PLV--ANGLVVVRTNDGRLTALDAATGERLWTYSRV-TPALTLRGSASPVI--ADGGVLVGFAGGKLVALDLQTGQPLWE  215 (377)
T ss_pred             CEE--ECCEEEEECCCCeEEEEEcCCCceeeEEccC-CCceeecCCCCCEE--ECCEEEEECCCCEEEEEEccCCCEeee
Confidence            222  3456777888999999999999987776321 1111     11111  124677788889999999865443222


Q ss_pred             EeeccccC--c------e-EEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCe
Q psy17610        247 CVLKEHTS--S------V-SVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKM  317 (515)
Q Consensus       247 ~~~~~~~~--~------v-~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  317 (515)
                      .......+  .      + ....+  .+..++.++.+|.+..+|..+++.+........ ..  ....+..+++++.+|.
T Consensus       216 ~~~~~~~g~~~~~~~~~~~~~p~~--~~~~vy~~~~~g~l~a~d~~tG~~~W~~~~~~~-~~--p~~~~~~vyv~~~~G~  290 (377)
T TIGR03300       216 QRVALPKGRTELERLVDVDGDPVV--DGGQVYAVSYQGRVAALDLRSGRVLWKRDASSY-QG--PAVDDNRLYVTDADGV  290 (377)
T ss_pred             eccccCCCCCchhhhhccCCccEE--ECCEEEEEEcCCEEEEEECCCCcEEEeeccCCc-cC--ceEeCCEEEEECCCCe
Confidence            21111000  0      0 01111  346788888899999999999987766553321 11  1234677888889999


Q ss_pred             EEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCee-EEEECCCCcEEEE
Q psy17610        318 IDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASIT-KIKISPDKKVIVS  396 (515)
Q Consensus       318 i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~-~~~~~~~~~~l~~  396 (515)
                      +..+|..+++.+.+..............  .+..+++++.+|.++++|..+++.+..+..+...+. +..+. ++ .|+.
T Consensus       291 l~~~d~~tG~~~W~~~~~~~~~~ssp~i--~g~~l~~~~~~G~l~~~d~~tG~~~~~~~~~~~~~~~sp~~~-~~-~l~v  366 (377)
T TIGR03300       291 VVALDRRSGSELWKNDELKYRQLTAPAV--VGGYLVVGDFEGYLHWLSREDGSFVARLKTDGSGIASPPVVV-GD-GLLV  366 (377)
T ss_pred             EEEEECCCCcEEEccccccCCccccCEE--ECCEEEEEeCCCEEEEEECCCCCEEEEEEcCCCccccCCEEE-CC-EEEE
Confidence            9999999998876653221122222222  356888999999999999999999988776654332 22332 33 5788


Q ss_pred             EeCCCcEEEE
Q psy17610        397 VSADGGIFLW  406 (515)
Q Consensus       397 ~~~dg~i~iw  406 (515)
                      ++.||.|..+
T Consensus       367 ~~~dG~l~~~  376 (377)
T TIGR03300       367 QTRDGDLYAF  376 (377)
T ss_pred             EeCCceEEEe
Confidence            8899998775

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=99.61  E-value=1.5e-11  Score=103.71  Aligned_cols=291  Identities=18%  Similarity=0.177  Sum_probs=191.1

Q ss_pred             CCeEEEEecCC--CceEEEecCCCCCCeEEEEEcCCCCEEEEecC---CCcEEEEEccCCcee--eEEeeccccCceEEE
Q psy17610        187 DGFIRCFTPQS--GKLKFIIPNAHNRGVTALAITQDGTRLLSGGG---EGQVRIWKLTRESQS--LQCVLKEHTSSVSVI  259 (515)
Q Consensus       187 dg~i~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~iw~~~~~~~~--~~~~~~~~~~~v~~~  259 (515)
                      +.-|.+|++.+  ++........+...++-++|+|+++.|.++..   +|.|.-|.++...+.  .+........+-..+
T Consensus        15 s~gI~v~~ld~~~g~l~~~~~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yv   94 (346)
T COG2706          15 SQGIYVFNLDTKTGELSLLQLVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYV   94 (346)
T ss_pred             CCceEEEEEeCcccccchhhhccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEE
Confidence            45699998874  33322222456778899999999999988754   478888888754333  222222233344789


Q ss_pred             EEecCCCEEEEEeC-CCcEEEEEccc-ce---EEEEEEcCcc----------EEEEEEcCCCcEEEEEEC-CCeEEEEeC
Q psy17610        260 QIKSDSKEAMSAST-DGTCVLWDLIK-ST---RLIIMILPSM----------IMSAAYHPSEVQLITCST-NKMIDYWET  323 (515)
Q Consensus       260 ~~~~~~~~l~~~~~-d~~i~iwd~~~-~~---~~~~~~~~~~----------~~~~~~~~~~~~l~~~~~-~~~i~~~d~  323 (515)
                      ++++++++++++.. .|.|.++-++. +.   .+....+...          +....+.|+++++++... ...|.+|++
T Consensus        95 svd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~  174 (346)
T COG2706          95 SVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDL  174 (346)
T ss_pred             EECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEc
Confidence            99999999988876 47899998865 22   2233333333          788899999999988765 457999999


Q ss_pred             CCCceEEE--EecCCCccEEEEEEcCCCCEEEEEcC-CCeEEEEEccCC-eeeeeccC---------CCCCeeEEEECCC
Q psy17610        324 CDGSIIRS--LEGSDVAAVNCVDFVDDGKYFLTGGA-DQIVKMWMYREG-VPCFVGIG---------HAASITKIKISPD  390 (515)
Q Consensus       324 ~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~-~~~~~~~~---------~~~~i~~~~~~~~  390 (515)
                      ..++....  .........+.|.|+|++++..+.++ +++|.+|..... ..+..++.         ......+|..++|
T Consensus       175 ~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~d  254 (346)
T COG2706         175 DDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPD  254 (346)
T ss_pred             ccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCC
Confidence            87765322  22233467889999999999877665 889999998773 22222221         2345678999999


Q ss_pred             CcEEEEEeC-CCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCC-eEEEE
Q psy17610        391 KKVIVSVSA-DGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNK-MIDYW  468 (515)
Q Consensus       391 ~~~l~~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg-~v~iw  468 (515)
                      |++|.++.. ...|.++.+......+...                .....+....+.+.++|.|++|+++..++ .|.+|
T Consensus       255 GrFLYasNRg~dsI~~f~V~~~~g~L~~~----------------~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf  318 (346)
T COG2706         255 GRFLYASNRGHDSIAVFSVDPDGGKLELV----------------GITPTEGQFPRDFNINPSGRFLIAANQKSDNITVF  318 (346)
T ss_pred             CCEEEEecCCCCeEEEEEEcCCCCEEEEE----------------EEeccCCcCCccceeCCCCCEEEEEccCCCcEEEE
Confidence            999998854 3478888776543211000                00111222367889999999999888654 47777


Q ss_pred             ec--CCCeeeeeecccccceEEEEEEc
Q psy17610        469 ET--CDGSIIRSLEGSDVAAVNCVDFV  493 (515)
Q Consensus       469 d~--~~~~~~~~~~~~~~~~v~~~~~s  493 (515)
                      ..  ++|++.............|+.|.
T Consensus       319 ~~d~~TG~L~~~~~~~~~p~Pvcv~f~  345 (346)
T COG2706         319 ERDKETGRLTLLGRYAVVPEPVCVKFL  345 (346)
T ss_pred             EEcCCCceEEecccccCCCCcEEEEEc
Confidence            65  45655444432222455667664

>KOG2041|consensus

Probab=99.61  E-value=7.6e-13  Score=120.59  Aligned_cols=281  Identities=12%  Similarity=0.112  Sum_probs=205.8

Q ss_pred             CccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCc---------------eeEEEEecCeEEEEEEEeeCCCEEEEEeCC
Q psy17610        123 HTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLN---------------ELLRISVMNMICACIVFTYDGKAILSGWND  187 (515)
Q Consensus       123 h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~---------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  187 (515)
                      ......|++|+.+..++++++.||.+++..+.+..               .-+++.+|+..|.-+.|+.+.+.|-+...+
T Consensus        13 nnvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~   92 (1189)
T KOG2041|consen   13 NNVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTS   92 (1189)
T ss_pred             CCceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCC
Confidence            44567899999999999999999999999876532               234577999999999999999999999999


Q ss_pred             CeEEEEecCCCceEEEe-cCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCC
Q psy17610        188 GFIRCFTPQSGKLKFII-PNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSK  266 (515)
Q Consensus       188 g~i~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  266 (515)
                      |.|.+|-+-.|...... .....+.|.+++|+.+|..+.....||.|.+=.++.+ ...-..+++  .....+.|++|.+
T Consensus        93 GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGN-RIwgKeLkg--~~l~hv~ws~D~~  169 (1189)
T KOG2041|consen   93 GLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGN-RIWGKELKG--QLLAHVLWSEDLE  169 (1189)
T ss_pred             ceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccc-eecchhcch--heccceeecccHH
Confidence            99999998877653322 1334567899999999999999999999988776522 111112222  1234678999999


Q ss_pred             EEEEEeCCCcEEEEEcccce-------E-EEE----EEcCccEEEEEE--------cCCCcEEEEEECCCeEEEEeCCCC
Q psy17610        267 EAMSASTDGTCVLWDLIKST-------R-LII----MILPSMIMSAAY--------HPSEVQLITCSTNKMIDYWETCDG  326 (515)
Q Consensus       267 ~l~~~~~d~~i~iwd~~~~~-------~-~~~----~~~~~~~~~~~~--------~~~~~~l~~~~~~~~i~~~d~~~~  326 (515)
                      .++.+-..|.+.++|....-       + +..    ...+..+..+.|        -|+...++++..+|.+.+..-.+.
T Consensus       170 ~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lavcy~nGr~QiMR~eND  249 (1189)
T KOG2041|consen  170 QALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVCYANGRMQIMRSEND  249 (1189)
T ss_pred             HHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCCEEEEEEcCceehhhhhcCC
Confidence            99999899999999975321       1 110    012233555555        357889999999999988765555


Q ss_pred             ceEEEEecCCCccEEEEEEcCCCCEEEEEcCC---------CeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEE
Q psy17610        327 SIIRSLEGSDVAAVNCVDFVDDGKYFLTGGAD---------QIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSV  397 (515)
Q Consensus       327 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---------g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~  397 (515)
                      .....+..+  ..+....|+++|..|++++.+         +.|.+|.. -|+.+.+++-....|++++|-..|-.++.+
T Consensus       250 ~~Pvv~dtg--m~~vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fysp-~G~i~gtlkvpg~~It~lsWEg~gLriA~A  326 (1189)
T KOG2041|consen  250 PEPVVVDTG--MKIVGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFYSP-YGHIVGTLKVPGSCITGLSWEGTGLRIAIA  326 (1189)
T ss_pred             CCCeEEecc--cEeecceecCCCcEEEEccCcccccCccccceEEEecc-chhheEEEecCCceeeeeEEcCCceEEEEE
Confidence            444444443  577889999999999998764         35566543 467777888888899999998777777665


Q ss_pred             eCCCcEEEEeCCC
Q psy17610        398 SADGGIFLWTFPE  410 (515)
Q Consensus       398 ~~dg~i~iw~~~~  410 (515)
                       .|+.|.+=+++.
T Consensus       327 -vdsfiyfanIRP  338 (1189)
T KOG2041|consen  327 -VDSFIYFANIRP  338 (1189)
T ss_pred             -ecceEEEEeecc
Confidence             567777666553

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.61  E-value=6.7e-13  Score=125.24  Aligned_cols=231  Identities=12%  Similarity=0.048  Sum_probs=155.4

Q ss_pred             cEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCC---CeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCE
Q psy17610        147 DIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWND---GFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTR  223 (515)
Q Consensus       147 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  223 (515)
                      .|.++|.. +...+.+..+...+....|+|||++|+.+...   ..|++||+.+++.....  .+...+.+++|+|+|+.
T Consensus       171 ~l~~~d~~-g~~~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~~--~~~~~~~~~~~spDg~~  247 (417)
T TIGR02800       171 ELQVADYD-GANPQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKVA--SFPGMNGAPAFSPDGSK  247 (417)
T ss_pred             eEEEEcCC-CCCCEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEee--cCCCCccceEECCCCCE
Confidence            58888875 34455566666678889999999999987654   47999999988665432  34556677899999987


Q ss_pred             EEE-ecCCC--cEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCC-C--cEEEEEcccceEEEEEEcCccE
Q psy17610        224 LLS-GGGEG--QVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTD-G--TCVLWDLIKSTRLIIMILPSMI  297 (515)
Q Consensus       224 l~~-~~~d~--~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~--~i~iwd~~~~~~~~~~~~~~~~  297 (515)
                      |+. .+.++  .|.+|++.....   ..+..+........|+|+++.++..+.. +  .|.++|+.+++...........
T Consensus       248 l~~~~~~~~~~~i~~~d~~~~~~---~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~~l~~~~~~~  324 (417)
T TIGR02800       248 LAVSLSKDGNPDIYVMDLDGKQL---TRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVRRLTFRGGYN  324 (417)
T ss_pred             EEEEECCCCCccEEEEECCCCCE---EECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecCCCCc
Confidence            764 44444  588888754322   2233344445567899999988876653 3  5888888776654444444566


Q ss_pred             EEEEEcCCCcEEEEEECCC---eEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCC---eEEEEEccCCee
Q psy17610        298 MSAAYHPSEVQLITCSTNK---MIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQ---IVKMWMYREGVP  371 (515)
Q Consensus       298 ~~~~~~~~~~~l~~~~~~~---~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg---~i~i~d~~~~~~  371 (515)
                      ....|+|++++++.+..++   .|.+||+.++... .+...  .......|+|+|++|+..+.++   .+.+.+. ++..
T Consensus       325 ~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~~-~l~~~--~~~~~p~~spdg~~l~~~~~~~~~~~l~~~~~-~g~~  400 (417)
T TIGR02800       325 ASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGER-VLTDT--GLDESPSFAPNGRMILYATTRGGRGVLGLVST-DGRF  400 (417)
T ss_pred             cCeEECCCCCEEEEEEccCCceEEEEEeCCCCCeE-EccCC--CCCCCceECCCCCEEEEEEeCCCcEEEEEEEC-CCce
Confidence            7889999999999888765   7899998876543 23222  2234568999999888776654   4555554 3444


Q ss_pred             eeeccCCCCCeeEEEE
Q psy17610        372 CFVGIGHAASITKIKI  387 (515)
Q Consensus       372 ~~~~~~~~~~i~~~~~  387 (515)
                      ...+..+.+.+..++|
T Consensus       401 ~~~~~~~~g~~~~~~w  416 (417)
T TIGR02800       401 RARLPLGNGDVREPAW  416 (417)
T ss_pred             eeECCCCCCCcCCCCC
Confidence            4444444444544444

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>PRK01029 tolB translocation protein TolB; Provisional

Probab=99.61  E-value=1.6e-12  Score=120.86  Aligned_cols=240  Identities=15%  Similarity=0.113  Sum_probs=153.2

Q ss_pred             ceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEE--EEec-C--CcEEEEeCCCCceeEEEEecCeEEEEEEEeeC
Q psy17610        103 CEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVF--ATCS-K--NDIRIWSVRTLNELLRISVMNMICACIVFTYD  177 (515)
Q Consensus       103 ~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~--~~~~-d--~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~  177 (515)
                      ..|++.|.+.+. ...+. .....+..-+|+|||+.++  ..+. +  ..|.+.++.+++.. .+....+.....+|+||
T Consensus       165 ~~l~~~d~dG~~-~~~lt-~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~-~lt~~~g~~~~p~wSPD  241 (428)
T PRK01029        165 GELWSVDYDGQN-LRPLT-QEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGK-KILALQGNQLMPTFSPR  241 (428)
T ss_pred             ceEEEEcCCCCC-ceEcc-cCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCce-EeecCCCCccceEECCC
Confidence            478888887643 33332 2455678889999997632  2333 3  35777888877543 33334444566899999


Q ss_pred             CCEEEEEeC-CC----eEEEEecCCC---ceEEEecCCCCCCeEEEEEcCCCCEEEEec-CCCcEEEEEccCC-ceeeEE
Q psy17610        178 GKAILSGWN-DG----FIRCFTPQSG---KLKFIIPNAHNRGVTALAITQDGTRLLSGG-GEGQVRIWKLTRE-SQSLQC  247 (515)
Q Consensus       178 ~~~l~~~~~-dg----~i~~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iw~~~~~-~~~~~~  247 (515)
                      |+.|+..+. +|    .+..|++..+   +..... ..+.......+|+|||+.|+..+ .+|...+|.+... ......
T Consensus       242 G~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt-~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~  320 (428)
T PRK01029        242 KKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLL-NEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPR  320 (428)
T ss_pred             CCEEEEEECCCCCcceeEEEeecccCCCCcceEee-cCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceE
Confidence            998887653 22    3444776653   333222 23333446789999999887655 4665556644211 111223


Q ss_pred             eeccccCceEEEEEecCCCEEEEEeCC---CcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEEC---CCeEEEE
Q psy17610        248 VLKEHTSSVSVIQIKSDSKEAMSASTD---GTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCST---NKMIDYW  321 (515)
Q Consensus       248 ~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~i~~~  321 (515)
                      .+..+...+....|+|||+.++..+.+   ..|.+||+.+++..........+....|+|+++.++....   ...|+++
T Consensus       321 ~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~v  400 (428)
T PRK01029        321 LLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQLTTSPENKESPSWAIDSLHLVYSAGNSNESELYLI  400 (428)
T ss_pred             EeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEEccCCCCCccceEECCCCCEEEEEECCCCCceEEEE
Confidence            333444566788999999998876653   3699999988877655444446778999999998876543   3568889


Q ss_pred             eCCCCceEEEEecCCCccEEEEEEcCC
Q psy17610        322 ETCDGSIIRSLEGSDVAAVNCVDFVDD  348 (515)
Q Consensus       322 d~~~~~~~~~~~~~~~~~i~~~~~~~~  348 (515)
                      |+..++........  +.+...+|+|-
T Consensus       401 dl~~g~~~~Lt~~~--g~~~~p~Ws~~  425 (428)
T PRK01029        401 SLITKKTRKIVIGS--GEKRFPSWGAF  425 (428)
T ss_pred             ECCCCCEEEeecCC--CcccCceecCC
Confidence            98877654443322  45566778774

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.60  E-value=1e-12  Score=124.07  Aligned_cols=221  Identities=13%  Similarity=0.120  Sum_probs=148.7

Q ss_pred             ceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecC---CcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCC
Q psy17610        103 CEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSK---NDIRIWSVRTLNELLRISVMNMICACIVFTYDGK  179 (515)
Q Consensus       103 ~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d---~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~  179 (515)
                      ..|.++|.+. .....+.. +...+...+|+|||++|+.++.+   ..|.+||+.+++... +..+...+.+++|+|||+
T Consensus       170 ~~l~~~d~~g-~~~~~l~~-~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~-~~~~~~~~~~~~~spDg~  246 (417)
T TIGR02800       170 YELQVADYDG-ANPQTITR-SREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREK-VASFPGMNGAPAFSPDGS  246 (417)
T ss_pred             ceEEEEcCCC-CCCEEeec-CCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEE-eecCCCCccceEECCCCC
Confidence            3688888865 33444433 66678999999999999988763   479999998876543 334555567789999999


Q ss_pred             EEEEE-eCCC--eEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecC-CC--cEEEEEccCCceeeEEeecccc
Q psy17610        180 AILSG-WNDG--FIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGG-EG--QVRIWKLTRESQSLQCVLKEHT  253 (515)
Q Consensus       180 ~l~~~-~~dg--~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~--~i~iw~~~~~~~~~~~~~~~~~  253 (515)
                      .|+.. +.++  .|.+|++.+++.....  .+........|+|+|+.|+..+. ++  .|.++++....  . ..+..+.
T Consensus       247 ~l~~~~~~~~~~~i~~~d~~~~~~~~l~--~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~--~-~~l~~~~  321 (417)
T TIGR02800       247 KLAVSLSKDGNPDIYVMDLDGKQLTRLT--NGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGE--V-RRLTFRG  321 (417)
T ss_pred             EEEEEECCCCCccEEEEECCCCCEEECC--CCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCC--E-EEeecCC
Confidence            87754 4343  5888999887654432  34444557789999998876554 33  56667764332  2 2233344


Q ss_pred             CceEEEEEecCCCEEEEEeCCC---cEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCC---eEEEEeCCCCc
Q psy17610        254 SSVSVIQIKSDSKEAMSASTDG---TCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNK---MIDYWETCDGS  327 (515)
Q Consensus       254 ~~v~~~~~~~~~~~l~~~~~d~---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~i~~~d~~~~~  327 (515)
                      .......|+|++++++.++.++   .|.+||+.++.... +..........|+|+++.++..+.++   .+++.+. ++.
T Consensus       322 ~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~~~-l~~~~~~~~p~~spdg~~l~~~~~~~~~~~l~~~~~-~g~  399 (417)
T TIGR02800       322 GYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGERV-LTDTGLDESPSFAPNGRMILYATTRGGRGVLGLVST-DGR  399 (417)
T ss_pred             CCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCeEE-ccCCCCCCCceECCCCCEEEEEEeCCCcEEEEEEEC-CCc
Confidence            5667789999999999888775   78999988755433 22233345568999999988877653   3455553 344


Q ss_pred             eEEEEe
Q psy17610        328 IIRSLE  333 (515)
Q Consensus       328 ~~~~~~  333 (515)
                      ....+.
T Consensus       400 ~~~~~~  405 (417)
T TIGR02800       400 FRARLP  405 (417)
T ss_pred             eeeECC
Confidence            444443

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=99.60  E-value=3.9e-11  Score=101.30  Aligned_cols=273  Identities=15%  Similarity=0.128  Sum_probs=177.7

Q ss_pred             EEEEecCCCcEEEEEEecCCCEEEEEecC---ceEEEEECCC--CceeEEe-eccCccCeEEEEeCCCCcEEEEEec-CC
Q psy17610         74 ALYLLKDDSGISSLQYNPVNNKVFVGTVN---CEIFLIDMNS--GFTLTLV-NTCHTSAIYDLQFPVNFSSVFATCS-KN  146 (515)
Q Consensus        74 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---~~i~iw~~~~--~~~~~~~-~~~h~~~v~~~~~~~~~~~l~~~~~-d~  146 (515)
                      ...+..+.+.++-|+|+|++++|.++..+   |.|.-|.++.  |+..... ......+-+.+++++++++++++.. .+
T Consensus        32 ~~~~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~g  111 (346)
T COG2706          32 LLQLVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHSG  111 (346)
T ss_pred             hhhhccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECCCCCEEEEEEccCc
Confidence            33445577889999999999999987654   6787777764  4322211 1112233488999999999999987 78


Q ss_pred             cEEEEeCCC-CceeE--EEEecCeE----------EEEEEEeeCCCEEEEEeC-CCeEEEEecCCCceEEEec--CCCCC
Q psy17610        147 DIRIWSVRT-LNELL--RISVMNMI----------CACIVFTYDGKAILSGWN-DGFIRCFTPQSGKLKFIIP--NAHNR  210 (515)
Q Consensus       147 ~i~iw~~~~-~~~~~--~~~~~~~~----------v~~~~~~~~~~~l~~~~~-dg~i~~~~~~~~~~~~~~~--~~~~~  210 (515)
                      .|.++-+.. |....  ....|.+.          +.+..+.|++++|++..- .-.|.+|+++.|.+.....  .....
T Consensus       112 ~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v~~G~  191 (346)
T COG2706         112 SVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTPADPAEVKPGA  191 (346)
T ss_pred             eEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEcccCccccccccccCCCC
Confidence            899999865 33211  22234333          788999999999988753 3469999999876543221  23455


Q ss_pred             CeEEEEEcCCCCEEEEecC-CCcEEEEEccCCceee--EEeec------cccCceEEEEEecCCCEEEEEeC-CCcEEEE
Q psy17610        211 GVTALAITQDGTRLLSGGG-EGQVRIWKLTRESQSL--QCVLK------EHTSSVSVIQIKSDSKEAMSAST-DGTCVLW  280 (515)
Q Consensus       211 ~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~~~--~~~~~------~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iw  280 (515)
                      ....|.|+|++++.....+ +++|.+|..+...++.  ++.+.      ........+.+++||++|.++.. ...|.++
T Consensus       192 GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~f  271 (346)
T COG2706         192 GPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAVF  271 (346)
T ss_pred             CcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEEEE
Confidence            6789999999998776654 7899999997532222  22211      12345677888999999887654 2367777


Q ss_pred             Ecccc--eEEE--EEEcCc-cEEEEEEcCCCcEEEEEECCC-eEEEEeC--CCCceEEEEecCCCccEEEEEEc
Q psy17610        281 DLIKS--TRLI--IMILPS-MIMSAAYHPSEVQLITCSTNK-MIDYWET--CDGSIIRSLEGSDVAAVNCVDFV  346 (515)
Q Consensus       281 d~~~~--~~~~--~~~~~~-~~~~~~~~~~~~~l~~~~~~~-~i~~~d~--~~~~~~~~~~~~~~~~i~~~~~~  346 (515)
                      .+...  +...  ...... ..+...+++.+++|+++..++ .|.+|..  .+|+.-............|+.|.
T Consensus       272 ~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~~TG~L~~~~~~~~~p~Pvcv~f~  345 (346)
T COG2706         272 SVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAANQKSDNITVFERDKETGRLTLLGRYAVVPEPVCVKFL  345 (346)
T ss_pred             EEcCCCCEEEEEEEeccCCcCCccceeCCCCCEEEEEccCCCcEEEEEEcCCCceEEecccccCCCCcEEEEEc
Confidence            66533  2211  122223 378899999999999988754 5666654  44544433332222344566553

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.60  E-value=1.9e-12  Score=122.19  Aligned_cols=234  Identities=11%  Similarity=0.050  Sum_probs=155.9

Q ss_pred             cEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCC---CeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCE
Q psy17610        147 DIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWND---GFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTR  223 (515)
Q Consensus       147 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  223 (515)
                      .|.++|.+.+ ..+.+..+...+....|+|||+.|+..+.+   ..|.+|++.+++.....  .....+....|+|+|+.
T Consensus       180 ~l~~~d~~g~-~~~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l~--~~~g~~~~~~~SpDG~~  256 (430)
T PRK00178        180 TLQRSDYDGA-RAVTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQIT--NFEGLNGAPAWSPDGSK  256 (430)
T ss_pred             EEEEECCCCC-CceEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEEcc--CCCCCcCCeEECCCCCE
Confidence            4777887644 445566677788999999999999876643   36899999988765432  23344557899999998


Q ss_pred             EEE-ecCCC--cEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeC-CC--cEEEEEcccceEEEEEEcCccE
Q psy17610        224 LLS-GGGEG--QVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST-DG--TCVLWDLIKSTRLIIMILPSMI  297 (515)
Q Consensus       224 l~~-~~~d~--~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~--~i~iwd~~~~~~~~~~~~~~~~  297 (515)
                      |+. ...+|  .|.++|+.....   ..+..+........|+||++.++..+. ++  .|.++++.+++...........
T Consensus       257 la~~~~~~g~~~Iy~~d~~~~~~---~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt~~~~~~  333 (430)
T PRK00178        257 LAFVLSKDGNPEIYVMDLASRQL---SRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERVTFVGNYN  333 (430)
T ss_pred             EEEEEccCCCceEEEEECCCCCe---EEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecCCCCc
Confidence            874 44454  577778854332   223344455667889999998877664 33  5777888777654433323334


Q ss_pred             EEEEEcCCCcEEEEEECC-C--eEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCC---CeEEEEEccCCee
Q psy17610        298 MSAAYHPSEVQLITCSTN-K--MIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGAD---QIVKMWMYREGVP  371 (515)
Q Consensus       298 ~~~~~~~~~~~l~~~~~~-~--~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~  371 (515)
                      ....|+|+++.++..... +  .|.++|+.+++... +...  .......|+|||+.++..+.+   ..+.+++.. +..
T Consensus       334 ~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~~-lt~~--~~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~~-g~~  409 (430)
T PRK00178        334 ARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSVRI-LTDT--SLDESPSVAPNGTMLIYATRQQGRGVLMLVSIN-GRV  409 (430)
T ss_pred             cceEECCCCCEEEEEEccCCceEEEEEECCCCCEEE-ccCC--CCCCCceECCCCCEEEEEEecCCceEEEEEECC-CCc
Confidence            457899999999877653 2  58889998876533 3222  122245899999998876643   347777774 334


Q ss_pred             eeeccCCCCCeeEEEECCC
Q psy17610        372 CFVGIGHAASITKIKISPD  390 (515)
Q Consensus       372 ~~~~~~~~~~i~~~~~~~~  390 (515)
                      ...+..+.+.+...+|+|-
T Consensus       410 ~~~l~~~~g~~~~p~ws~~  428 (430)
T PRK00178        410 RLPLPTAQGEVREPSWSPY  428 (430)
T ss_pred             eEECcCCCCCcCCCccCCC
Confidence            4445455566777788763

>KOG1354|consensus

Probab=99.59  E-value=1.1e-13  Score=114.97  Aligned_cols=288  Identities=16%  Similarity=0.228  Sum_probs=183.5

Q ss_pred             CCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCc---eeeEEeecccc------------CceEEEEEecCCC--EEEE
Q psy17610        208 HNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRES---QSLQCVLKEHT------------SSVSVIQIKSDSK--EAMS  270 (515)
Q Consensus       208 ~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~---~~~~~~~~~~~------------~~v~~~~~~~~~~--~l~~  270 (515)
                      ...-|.++.|...|.+|++|..+|.|.+|.-....   ......++.|.            ..|..+.|.++++  .++.
T Consensus        24 eadiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLl  103 (433)
T KOG1354|consen   24 EADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLL  103 (433)
T ss_pred             hhcceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEE
Confidence            34568899999999999999999999999754222   12333344443            3577888887654  5778


Q ss_pred             EeCCCcEEEEEcccceEEE-EEE-----cCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEE
Q psy17610        271 ASTDGTCVLWDLIKSTRLI-IMI-----LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVD  344 (515)
Q Consensus       271 ~~~d~~i~iwd~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~  344 (515)
                      .+.|.+|++|.+....... ...     .+..+.++..      .+.+..+-.+      ...+.+.+...|...|+++.
T Consensus       104 stNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~------p~~~~~~~~v------ea~prRv~aNaHtyhiNSIS  171 (433)
T KOG1354|consen  104 STNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRL------PVEGRHDLEV------EASPRRVYANAHTYHINSIS  171 (433)
T ss_pred             ecCCcceeeeeeeccccccccccccccCCCCccceeec------eeecccccee------eeeeeeeccccceeEeeeee
Confidence            8889999999986543222 000     1111211111      0001111000      12344555566668899999


Q ss_pred             EcCCCCEEEEEcCCCeEEEEEccCCee---eeeccCC-----CCCeeEEEECC-CCcEEEEEeCCCcEEEEeCCCCcCcc
Q psy17610        345 FVDDGKYFLTGGADQIVKMWMYREGVP---CFVGIGH-----AASITKIKISP-DKKVIVSVSADGGIFLWTFPELEDDV  415 (515)
Q Consensus       345 ~~~~~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~-----~~~i~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~~~~  415 (515)
                      ++.|+..++++. |=.|.+|+++-...   +.-++++     ..-|++..|+| ..+.++..+..|+|++-|++......
T Consensus       172 ~NsD~Et~lSAD-dLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd  250 (433)
T KOG1354|consen  172 VNSDKETFLSAD-DLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCD  250 (433)
T ss_pred             ecCccceEeecc-ceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhc
Confidence            999999888765 67899998864322   1222333     35688999999 45678888899999999998543211


Q ss_pred             CCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEec-CCCeeeeeecccc-----------
Q psy17610        416 GDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWET-CDGSIIRSLEGSD-----------  483 (515)
Q Consensus       416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~-~~~~~~~~~~~~~-----------  483 (515)
                      .......    ....+..+..+...-+.|..+.|+++|+++++-+ --+|++||+ ...+++.+.+-|.           
T Consensus       251 ~hsKlfE----epedp~~rsffseiIsSISDvKFs~sGryilsRD-yltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYE  325 (433)
T KOG1354|consen  251 AHSKLFE----EPEDPSSRSFFSEIISSISDVKFSHSGRYILSRD-YLTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYE  325 (433)
T ss_pred             chhhhhc----cccCCcchhhHHHHhhhhhceEEccCCcEEEEec-cceeEEEeccccCCcceEEeehHhHHHHHHHHhh
Confidence            1111000    0001111122222335588999999999999875 357999999 5566776666543           


Q ss_pred             cceE---EEEEEcCCCcEEEEeecCCeEEEEEE
Q psy17610        484 VAAV---NCVDFVDDGKYFLTGGADQIVKICLY  513 (515)
Q Consensus       484 ~~~v---~~~~~s~~~~~l~s~~~dg~v~iw~~  513 (515)
                      ...|   ..++|+-++.+++||+....+++++.
T Consensus       326 nD~IfdKFec~~sg~~~~v~TGsy~n~frvf~~  358 (433)
T KOG1354|consen  326 NDAIFDKFECSWSGNDSYVMTGSYNNVFRVFNL  358 (433)
T ss_pred             ccchhheeEEEEcCCcceEecccccceEEEecC
Confidence            1222   35799999999999999999999873

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.59  E-value=1.7e-12  Score=121.66  Aligned_cols=233  Identities=11%  Similarity=0.043  Sum_probs=152.7

Q ss_pred             cEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCC---CeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCE
Q psy17610        147 DIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWND---GFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTR  223 (515)
Q Consensus       147 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  223 (515)
                      .+.++|.+.. ..+.+......+....|+|||+.|+..+.+   ..|.++|+.+++.....  ..........|+|||+.
T Consensus       199 ~l~i~d~dG~-~~~~l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~lt--~~~g~~~~~~wSPDG~~  275 (448)
T PRK04792        199 QLMIADYDGY-NEQMLLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKVT--SFPGINGAPRFSPDGKK  275 (448)
T ss_pred             EEEEEeCCCC-CceEeecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEec--CCCCCcCCeeECCCCCE
Confidence            5677786544 345566667788899999999999876543   36889999888754332  22233457899999998


Q ss_pred             EEE-ecCCCc--EEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeC-CC--cEEEEEcccceEEEEEEcCccE
Q psy17610        224 LLS-GGGEGQ--VRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST-DG--TCVLWDLIKSTRLIIMILPSMI  297 (515)
Q Consensus       224 l~~-~~~d~~--i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~--~i~iwd~~~~~~~~~~~~~~~~  297 (515)
                      |+. .+.++.  |.++|+....  . ..+..+........|+||++.++..+. ++  .|.++|+.+++...........
T Consensus       276 La~~~~~~g~~~Iy~~dl~tg~--~-~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~Lt~~g~~~  352 (448)
T PRK04792        276 LALVLSKDGQPEIYVVDIATKA--L-TRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSRLTFEGEQN  352 (448)
T ss_pred             EEEEEeCCCCeEEEEEECCCCC--e-EECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEEecCCCCC
Confidence            875 455665  6666764332  2 233344455677899999998877654 33  4667777776654433222334


Q ss_pred             EEEEEcCCCcEEEEEECC-C--eEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCC-C--eEEEEEccCCee
Q psy17610        298 MSAAYHPSEVQLITCSTN-K--MIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGAD-Q--IVKMWMYREGVP  371 (515)
Q Consensus       298 ~~~~~~~~~~~l~~~~~~-~--~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-g--~i~i~d~~~~~~  371 (515)
                      ...+|+|+++.++..+.+ +  .|.++|+.+++... +...  .......|+|||+.|+....+ +  .+.+++. ++..
T Consensus       353 ~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~~~-lt~~--~~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~-~G~~  428 (448)
T PRK04792        353 LGGSITPDGRSMIMVNRTNGKFNIARQDLETGAMQV-LTST--RLDESPSVAPNGTMVIYSTTYQGKQVLAAVSI-DGRF  428 (448)
T ss_pred             cCeeECCCCCEEEEEEecCCceEEEEEECCCCCeEE-ccCC--CCCCCceECCCCCEEEEEEecCCceEEEEEEC-CCCc
Confidence            457899999998876553 3  46668888776532 3222  112245799999988765543 3  3777776 4555


Q ss_pred             eeeccCCCCCeeEEEECC
Q psy17610        372 CFVGIGHAASITKIKISP  389 (515)
Q Consensus       372 ~~~~~~~~~~i~~~~~~~  389 (515)
                      ...+..+.+.+...+|+|
T Consensus       429 ~~~l~~~~g~~~~p~Wsp  446 (448)
T PRK04792        429 KARLPAGQGEVKSPAWSP  446 (448)
T ss_pred             eEECcCCCCCcCCCccCC
Confidence            666666667778888887

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=99.58  E-value=9e-12  Score=108.30  Aligned_cols=149  Identities=12%  Similarity=0.092  Sum_probs=119.6

Q ss_pred             EEecCCCcEEEEEEecCCCEEEEEecCc-eEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCC
Q psy17610         76 YLLKDDSGISSLQYNPVNNKVFVGTVNC-EIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVR  154 (515)
Q Consensus        76 ~~~~~~~~v~~~~~s~~~~~l~~~~~d~-~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~  154 (515)
                      ...+|.+.|.-..+.-+++-++.|..|| .+-|+|..+++ ...+ ...-+.|.++..+|+|+.++++-....+.+.|++
T Consensus       354 iqv~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e-~kr~-e~~lg~I~av~vs~dGK~~vvaNdr~el~vidid  431 (668)
T COG4946         354 IQVGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGE-VKRI-EKDLGNIEAVKVSPDGKKVVVANDRFELWVIDID  431 (668)
T ss_pred             EEcCCCCceEEEEEccCCcceEEeccCCceEEEEecCCce-EEEe-eCCccceEEEEEcCCCcEEEEEcCceEEEEEEec
Confidence            3457888899999998888999999998 89999999863 3333 3467789999999999999999888999999999


Q ss_pred             CCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCC----eEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEec
Q psy17610        155 TLNELLRISVMNMICACIVFTYDGKAILSGWNDG----FIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGG  228 (515)
Q Consensus       155 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  228 (515)
                      +++....-+...+-|+.+.|+|+++++|-+--+|    .|+++|+.+++.....  ...+.=.+-+|.|++++|..-+
T Consensus       432 ngnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vT--T~ta~DfsPaFD~d~ryLYfLs  507 (668)
T COG4946         432 NGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVT--TPTAYDFSPAFDPDGRYLYFLS  507 (668)
T ss_pred             CCCeeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEec--CCcccccCcccCCCCcEEEEEe
Confidence            9987665566677899999999999999776554    6899999998876543  1222224568999999887554

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.58  E-value=1.1e-12  Score=122.94  Aligned_cols=233  Identities=15%  Similarity=0.126  Sum_probs=149.1

Q ss_pred             eEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecC---CcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCE
Q psy17610        104 EIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSK---NDIRIWSVRTLNELLRISVMNMICACIVFTYDGKA  180 (515)
Q Consensus       104 ~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d---~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  180 (515)
                      .|.++|.+.. ....+ ..+...+.+..|+|||+.|+.++.+   ..|.+||+.+++... +...........|+|||+.
T Consensus       199 ~l~i~d~dG~-~~~~l-~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~-lt~~~g~~~~~~wSPDG~~  275 (448)
T PRK04792        199 QLMIADYDGY-NEQML-LRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREK-VTSFPGINGAPRFSPDGKK  275 (448)
T ss_pred             EEEEEeCCCC-CceEe-ecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEE-ecCCCCCcCCeeECCCCCE
Confidence            6788887663 33333 3367789999999999999887653   258889998876532 3322333456899999998


Q ss_pred             EEE-EeCCCe--EEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecC-CCc--EEEEEccCCceeeEEeeccccC
Q psy17610        181 ILS-GWNDGF--IRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGG-EGQ--VRIWKLTRESQSLQCVLKEHTS  254 (515)
Q Consensus       181 l~~-~~~dg~--i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~--i~iw~~~~~~~~~~~~~~~~~~  254 (515)
                      |+. .+.++.  |.++|+.+++.....  .+........|+|||+.++..+. ++.  |.++|+.......+ ...+  .
T Consensus       276 La~~~~~~g~~~Iy~~dl~tg~~~~lt--~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~L-t~~g--~  350 (448)
T PRK04792        276 LALVLSKDGQPEIYVVDIATKALTRIT--RHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSRL-TFEG--E  350 (448)
T ss_pred             EEEEEeCCCCeEEEEEECCCCCeEECc--cCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEE-ecCC--C
Confidence            875 455564  788898887765432  34455677899999998876543 444  55556543332222 1222  2


Q ss_pred             ceEEEEEecCCCEEEEEeCC-C--cEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECC-C--eEEEEeCCCCce
Q psy17610        255 SVSVIQIKSDSKEAMSASTD-G--TCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTN-K--MIDYWETCDGSI  328 (515)
Q Consensus       255 ~v~~~~~~~~~~~l~~~~~d-~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~--~i~~~d~~~~~~  328 (515)
                      ......|+|||++++..+.+ +  .|.++|+.+++.... ..........|+|+++.++....+ +  .+++++. ++..
T Consensus       351 ~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~~~l-t~~~~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~-~G~~  428 (448)
T PRK04792        351 QNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAMQVL-TSTRLDESPSVAPNGTMVIYSTTYQGKQVLAAVSI-DGRF  428 (448)
T ss_pred             CCcCeeECCCCCEEEEEEecCCceEEEEEECCCCCeEEc-cCCCCCCCceECCCCCEEEEEEecCCceEEEEEEC-CCCc
Confidence            23456899999998876653 3  456678777654332 222223345799999988876553 3  3777776 5555


Q ss_pred             EEEEecCCCccEEEEEEcC
Q psy17610        329 IRSLEGSDVAAVNCVDFVD  347 (515)
Q Consensus       329 ~~~~~~~~~~~i~~~~~~~  347 (515)
                      ...+..+. +.+...+|+|
T Consensus       429 ~~~l~~~~-g~~~~p~Wsp  446 (448)
T PRK04792        429 KARLPAGQ-GEVKSPAWSP  446 (448)
T ss_pred             eEECcCCC-CCcCCCccCC
Confidence            55565443 5566677776

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.58  E-value=2.3e-12  Score=121.54  Aligned_cols=233  Identities=14%  Similarity=0.087  Sum_probs=151.7

Q ss_pred             eEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecC---CcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCE
Q psy17610        104 EIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSK---NDIRIWSVRTLNELLRISVMNMICACIVFTYDGKA  180 (515)
Q Consensus       104 ~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d---~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  180 (515)
                      .|.++|.+.+ ....+. .+...+....|+|||+.|+..+.+   ..|.+||+.+++... +....+......|+|||+.
T Consensus       180 ~l~~~d~~g~-~~~~l~-~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~-l~~~~g~~~~~~~SpDG~~  256 (430)
T PRK00178        180 TLQRSDYDGA-RAVTLL-QSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQ-ITNFEGLNGAPAWSPDGSK  256 (430)
T ss_pred             EEEEECCCCC-CceEEe-cCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEE-ccCCCCCcCCeEECCCCCE
Confidence            5888888764 344333 367789999999999999887753   368999998876533 3333344557899999998


Q ss_pred             EEE-EeCCC--eEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecC-CC--cEEEEEccCCceeeEEeeccccC
Q psy17610        181 ILS-GWNDG--FIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGG-EG--QVRIWKLTRESQSLQCVLKEHTS  254 (515)
Q Consensus       181 l~~-~~~dg--~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~--~i~iw~~~~~~~~~~~~~~~~~~  254 (515)
                      |+. ...+|  .|.++|+.+++... + ..+........|+|+|+.++..+. ++  .|.++++........ ...+  .
T Consensus       257 la~~~~~~g~~~Iy~~d~~~~~~~~-l-t~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~l-t~~~--~  331 (430)
T PRK00178        257 LAFVLSKDGNPEIYVMDLASRQLSR-V-TNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERV-TFVG--N  331 (430)
T ss_pred             EEEEEccCCCceEEEEECCCCCeEE-c-ccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEe-ecCC--C
Confidence            874 44444  68888999887654 3 344555667899999998876553 33  466667643332222 1222  2


Q ss_pred             ceEEEEEecCCCEEEEEeCC-C--cEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECC---CeEEEEeCCCCce
Q psy17610        255 SVSVIQIKSDSKEAMSASTD-G--TCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTN---KMIDYWETCDGSI  328 (515)
Q Consensus       255 ~v~~~~~~~~~~~l~~~~~d-~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~i~~~d~~~~~~  328 (515)
                      ......|+|+++.++..+.+ +  .|.++|+.+++..... .........|+|+++.++..+.+   ..+.++++.. ..
T Consensus       332 ~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~~lt-~~~~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~~g-~~  409 (430)
T PRK00178        332 YNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSVRILT-DTSLDESPSVAPNGTMLIYATRQQGRGVLMLVSING-RV  409 (430)
T ss_pred             CccceEECCCCCEEEEEEccCCceEEEEEECCCCCEEEcc-CCCCCCCceECCCCCEEEEEEecCCceEEEEEECCC-Cc
Confidence            23456899999999877653 2  5888998877654332 22233356899999999877653   3567777743 33


Q ss_pred             EEEEecCCCccEEEEEEcC
Q psy17610        329 IRSLEGSDVAAVNCVDFVD  347 (515)
Q Consensus       329 ~~~~~~~~~~~i~~~~~~~  347 (515)
                      ...+..+. +.+...+|+|
T Consensus       410 ~~~l~~~~-g~~~~p~ws~  427 (430)
T PRK00178        410 RLPLPTAQ-GEVREPSWSP  427 (430)
T ss_pred             eEECcCCC-CCcCCCccCC
Confidence            33444332 4555666665

>PRK01029 tolB translocation protein TolB; Provisional

Probab=99.57  E-value=3.4e-12  Score=118.67  Aligned_cols=220  Identities=14%  Similarity=0.068  Sum_probs=140.4

Q ss_pred             CCCcEEEEEEecCCCEEE---EEecC--ceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec-CC----cEE
Q psy17610         80 DDSGISSLQYNPVNNKVF---VGTVN--CEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS-KN----DIR  149 (515)
Q Consensus        80 ~~~~v~~~~~s~~~~~l~---~~~~d--~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-d~----~i~  149 (515)
                      ....+..-+|||||+.++   +...+  ..|++.++.+++.....  ...+.....+|+|||+.|+..+. ++    .+.
T Consensus       183 ~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt--~~~g~~~~p~wSPDG~~Laf~s~~~g~~di~~~  260 (428)
T PRK01029        183 EHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKIL--ALQGNQLMPTFSPRKKLLAFISDRYGNPDLFIQ  260 (428)
T ss_pred             CCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceEee--cCCCCccceEECCCCCEEEEEECCCCCcceeEE
Confidence            455667789999997533   33333  46888899886543322  24445567899999999988764 22    244


Q ss_pred             EEeCCCC--ceeEEEEec-CeEEEEEEEeeCCCEEEEEe-CCCeEEEE--ecCC-CceEEEecCCCCCCeEEEEEcCCCC
Q psy17610        150 IWSVRTL--NELLRISVM-NMICACIVFTYDGKAILSGW-NDGFIRCF--TPQS-GKLKFIIPNAHNRGVTALAITQDGT  222 (515)
Q Consensus       150 iw~~~~~--~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~-~dg~i~~~--~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~  222 (515)
                      +|++..+  .....+... .......+|+|||+.|+..+ .+|...+|  ++.. +.....+ ..+...+....|+|||+
T Consensus       261 ~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~l-t~~~~~~~~p~wSPDG~  339 (428)
T PRK01029        261 SFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLL-TKKYRNSSCPAWSPDGK  339 (428)
T ss_pred             EeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEe-ccCCCCccceeECCCCC
Confidence            4777653  233333322 23346789999999888765 45654444  4432 2223333 23445667889999999


Q ss_pred             EEEEecCC---CcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeC---CCcEEEEEcccceEEEEEEcCcc
Q psy17610        223 RLLSGGGE---GQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST---DGTCVLWDLIKSTRLIIMILPSM  296 (515)
Q Consensus       223 ~l~~~~~d---~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~iwd~~~~~~~~~~~~~~~  296 (515)
                      .|+..+.+   ..|.+||+.......   +......+....|+|||+.|+....   ...|.++|+..++..........
T Consensus       340 ~Laf~~~~~g~~~I~v~dl~~g~~~~---Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~~~Lt~~~g~  416 (428)
T PRK01029        340 KIAFCSVIKGVRQICVYDLATGRDYQ---LTTSPENKESPSWAIDSLHLVYSAGNSNESELYLISLITKKTRKIVIGSGE  416 (428)
T ss_pred             EEEEEEcCCCCcEEEEEECCCCCeEE---ccCCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecCCCc
Confidence            88866543   468999986543322   2222345677899999998876543   35688889887776665555555


Q ss_pred             EEEEEEcCC
Q psy17610        297 IMSAAYHPS  305 (515)
Q Consensus       297 ~~~~~~~~~  305 (515)
                      ....+|+|-
T Consensus       417 ~~~p~Ws~~  425 (428)
T PRK01029        417 KRFPSWGAF  425 (428)
T ss_pred             ccCceecCC
Confidence            666777764

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=99.56  E-value=1.9e-11  Score=113.32  Aligned_cols=300  Identities=14%  Similarity=0.097  Sum_probs=188.2

Q ss_pred             CCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCce
Q psy17610        177 DGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSV  256 (515)
Q Consensus       177 ~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v  256 (515)
                      .+..+++++.+|.+..+|..+|+.+...... .........  ++..++.++.++.+..+|..+++........   ..+
T Consensus        64 ~~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~-~~~~~~p~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~---~~~  137 (377)
T TIGR03300        64 AGGKVYAADADGTVVALDAETGKRLWRVDLD-ERLSGGVGA--DGGLVFVGTEKGEVIALDAEDGKELWRAKLS---SEV  137 (377)
T ss_pred             ECCEEEEECCCCeEEEEEccCCcEeeeecCC-CCcccceEE--cCCEEEEEcCCCEEEEEECCCCcEeeeeccC---cee
Confidence            3667888989999999999999988765322 111112222  4667888889999999998654433322221   122


Q ss_pred             EEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEE--EcC--CCcEEEEEECCCeEEEEeCCCCceEEEE
Q psy17610        257 SVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAA--YHP--SEVQLITCSTNKMIDYWETCDGSIIRSL  332 (515)
Q Consensus       257 ~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~--~~~--~~~~l~~~~~~~~i~~~d~~~~~~~~~~  332 (515)
                      .+.... .+..++.++.++.+..+|.++++.+.......+.....  -+|  .+..++.+..++.+..+|.++++.+.+.
T Consensus       138 ~~~p~v-~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~~~~~v~~~~~~g~v~ald~~tG~~~W~~  216 (377)
T TIGR03300       138 LSPPLV-ANGLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRGSASPVIADGGVLVGFAGGKLVALDLQTGQPLWEQ  216 (377)
T ss_pred             ecCCEE-ECCEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecCCCCCEEECCEEEEECCCCEEEEEEccCCCEeeee
Confidence            211111 24567778889999999999998887765544321111  011  1346778888899999999999887654


Q ss_pred             ecCCCc---c---EEEEEEcC--CCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEE
Q psy17610        333 EGSDVA---A---VNCVDFVD--DGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIF  404 (515)
Q Consensus       333 ~~~~~~---~---i~~~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~  404 (515)
                      ......   .   ...+.-+|  .+..+++++.+|.+..+|.++++.+......  ......  .++..++.++.+|.+.
T Consensus       217 ~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~tG~~~W~~~~~--~~~~p~--~~~~~vyv~~~~G~l~  292 (377)
T TIGR03300       217 RVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVAALDLRSGRVLWKRDAS--SYQGPA--VDDNRLYVTDADGVVV  292 (377)
T ss_pred             ccccCCCCCchhhhhccCCccEEECCEEEEEEcCCEEEEEECCCCcEEEeeccC--CccCce--EeCCEEEEECCCCeEE
Confidence            321100   0   00111111  3457778888999999999999877655421  112222  2466788888999999


Q ss_pred             EEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeeccccc
Q psy17610        405 LWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDV  484 (515)
Q Consensus       405 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~  484 (515)
                      .+|..+++....... ..                  .........  .+..+++++.+|.++++|..+|+.+..+..+. 
T Consensus       293 ~~d~~tG~~~W~~~~-~~------------------~~~~ssp~i--~g~~l~~~~~~G~l~~~d~~tG~~~~~~~~~~-  350 (377)
T TIGR03300       293 ALDRRSGSELWKNDE-LK------------------YRQLTAPAV--VGGYLVVGDFEGYLHWLSREDGSFVARLKTDG-  350 (377)
T ss_pred             EEECCCCcEEEcccc-cc------------------CCccccCEE--ECCEEEEEeCCCEEEEEECCCCCEEEEEEcCC-
Confidence            999876642211100 00                  000111111  35688899999999999999999998887654 


Q ss_pred             ceEE-EEEEcCCCcEEEEeecCCeEEEE
Q psy17610        485 AAVN-CVDFVDDGKYFLTGGADQIVKIC  511 (515)
Q Consensus       485 ~~v~-~~~~s~~~~~l~s~~~dg~v~iw  511 (515)
                      ..+. ..++. ++ .|+.++.||.|..|
T Consensus       351 ~~~~~sp~~~-~~-~l~v~~~dG~l~~~  376 (377)
T TIGR03300       351 SGIASPPVVV-GD-GLLVQTRDGDLYAF  376 (377)
T ss_pred             CccccCCEEE-CC-EEEEEeCCceEEEe
Confidence            3332 22333 44 47888999988765

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=99.48  E-value=2.4e-10  Score=106.35  Aligned_cols=306  Identities=11%  Similarity=0.081  Sum_probs=188.9

Q ss_pred             CCCEEEEEecCceEEEEECCCCceeEEeeccCccCe----------EEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEE
Q psy17610         92 VNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAI----------YDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLR  161 (515)
Q Consensus        92 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v----------~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~  161 (515)
                      .+..+++++.+|.+.-+|.++|+.+-..........          ..+..  ++..+++++.++.+.-+|.++|+.+.+
T Consensus        68 ~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~v~v~~~~g~l~ald~~tG~~~W~  145 (394)
T PRK11138         68 AYNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTV--AGGKVYIGSEKGQVYALNAEDGEVAWQ  145 (394)
T ss_pred             ECCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEE--ECCEEEEEcCCCEEEEEECCCCCCccc
Confidence            366788888889999999999876655322111000          01111  345788888899999999999999887


Q ss_pred             EEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcC--CCCEEEEecCCCcEEEEEcc
Q psy17610        162 ISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQ--DGTRLLSGGGEGQVRIWKLT  239 (515)
Q Consensus       162 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~iw~~~  239 (515)
                      .............  .+..++++..++.+..+|.++|+.+...............-+|  .+..++.++.+|.+..+|..
T Consensus       146 ~~~~~~~~ssP~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~sP~v~~~~v~~~~~~g~v~a~d~~  223 (394)
T PRK11138        146 TKVAGEALSRPVV--SDGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRGESAPATAFGGAIVGGDNGRVSAVLME  223 (394)
T ss_pred             ccCCCceecCCEE--ECCEEEEECCCCEEEEEEccCCCEeeeecCCCCcccccCCCCCEEECCEEEEEcCCCEEEEEEcc
Confidence            7654332222222  2446777888999999999999998876422110000000111  13356677788888888876


Q ss_pred             CCceeeEEeecccc--C---ceEEEEEec--CCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEE
Q psy17610        240 RESQSLQCVLKEHT--S---SVSVIQIKS--DSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITC  312 (515)
Q Consensus       240 ~~~~~~~~~~~~~~--~---~v~~~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  312 (515)
                      +++...........  .   ....+..+|  .+..++.++.+|.+..+|..+++.+........ ..+  ...+..++++
T Consensus       224 ~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~-~~~--~~~~~~vy~~  300 (394)
T PRK11138        224 QGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSGQIVWKREYGSV-NDF--AVDGGRIYLV  300 (394)
T ss_pred             CChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEECCCCCEEEeecCCCc-cCc--EEECCEEEEE
Confidence            44332222111100  0   000011111  245677788899999999999987766543321 111  2246678888


Q ss_pred             ECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeE-EEECCCC
Q psy17610        313 STNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITK-IKISPDK  391 (515)
Q Consensus       313 ~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~-~~~~~~~  391 (515)
                      +.++.+..+|..+++.+................  .+..+++++.+|.+...|..+|+.+....-....+.+ ..+  .+
T Consensus       301 ~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v--~~g~l~v~~~~G~l~~ld~~tG~~~~~~~~~~~~~~s~P~~--~~  376 (394)
T PRK11138        301 DQNDRVYALDTRGGVELWSQSDLLHRLLTAPVL--YNGYLVVGDSEGYLHWINREDGRFVAQQKVDSSGFLSEPVV--AD  376 (394)
T ss_pred             cCCCeEEEEECCCCcEEEcccccCCCcccCCEE--ECCEEEEEeCCCEEEEEECCCCCEEEEEEcCCCcceeCCEE--EC
Confidence            899999999999998776543221111222222  2457788899999999999999888766443332222 222  34


Q ss_pred             cEEEEEeCCCcEEEEeC
Q psy17610        392 KVIVSVSADGGIFLWTF  408 (515)
Q Consensus       392 ~~l~~~~~dg~i~iw~~  408 (515)
                      ..|+.++.||.+..++.
T Consensus       377 ~~l~v~t~~G~l~~~~~  393 (394)
T PRK11138        377 DKLLIQARDGTVYAITR  393 (394)
T ss_pred             CEEEEEeCCceEEEEeC
Confidence            47888899999988764

>KOG0280|consensus

Probab=99.47  E-value=6.4e-11  Score=96.66  Aligned_cols=264  Identities=14%  Similarity=0.193  Sum_probs=170.8

Q ss_pred             CceEEEEECCCCceeE--EeeccCccCeEEEEeCC---CCc-EEEEEecCCcEEEEeCCCCceeEEEEecC------eEE
Q psy17610        102 NCEIFLIDMNSGFTLT--LVNTCHTSAIYDLQFPV---NFS-SVFATCSKNDIRIWSVRTLNELLRISVMN------MIC  169 (515)
Q Consensus       102 d~~i~iw~~~~~~~~~--~~~~~h~~~v~~~~~~~---~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~------~~v  169 (515)
                      .|++.+|++...+...  .+..-....+..+.|..   +|. .++-+-.+|.|.++..........+.+-.      ...
T Consensus        45 ~Gkl~Lys~~d~~~~~l~~~q~~dts~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~  124 (339)
T KOG0280|consen   45 SGKLHLYSLEDMKLSPLDTLQCTDTSTEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVEA  124 (339)
T ss_pred             ccceEEEeecccccCccceeeeecccccceeeeeeccCCccceeeeccccceEEEEeeccceeeeeecccchhhhhheee
Confidence            4678999887633222  22222445677777752   444 45555668999999876544443333221      134


Q ss_pred             EEEEEeeCCCEEEEEeCCCeEEEEecCCCceEE--EecCCCCCCeEEEEEcC-CCCEEEEecCCCcEEEEEccCCceeeE
Q psy17610        170 ACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKF--IIPNAHNRGVTALAITQ-DGTRLLSGGGEGQVRIWKLTRESQSLQ  246 (515)
Q Consensus       170 ~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~~~~~  246 (515)
                      .++.|++.+..++++..+|.+.+-+........  .. ++|+.+.....|+. +.+.+.+|+.|+.+..||++.+..-.-
T Consensus       125 lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~w-k~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~  203 (339)
T KOG0280|consen  125 LSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTW-KVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIW  203 (339)
T ss_pred             eEEEeeccCceEEEEcCCCcEEEEecceeeeeecccc-cccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceee
Confidence            578899999999999999999966655544433  44 78999999999987 557889999999999999984443333


Q ss_pred             EeeccccCceEEEEEec-CCCEEEEEeCCCcEEEEEcc-cceEEEEEEcCccEEEEEEcCCCc--EEEEEECCCeEEEEe
Q psy17610        247 CVLKEHTSSVSVIQIKS-DSKEAMSASTDGTCVLWDLI-KSTRLIIMILPSMIMSAAYHPSEV--QLITCSTNKMIDYWE  322 (515)
Q Consensus       247 ~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~~~~i~~~d  322 (515)
                      ...+.|...|.++.-+| .+.++++|+.|..|++||.+ -++++..-...+.|..+..+|.-.  .++++-.+| .++.+
T Consensus       204 ~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~~v~GGVWRi~~~p~~~~~lL~~CMh~G-~ki~~  282 (339)
T KOG0280|consen  204 HNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKAKVGGGVWRIKHHPEIFHRLLAACMHNG-AKILD  282 (339)
T ss_pred             ecceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCccccCccccceEEEEecchhhhHHHHHHHhcC-ceEEE
Confidence            33567888999988776 57789999999999999998 466777777778999999999543  333333333 44444


Q ss_pred             CCCCce-----EEEEecCCCccEEEEEEcCCCCEEEEEc-CCCeEE-EEEccC
Q psy17610        323 TCDGSI-----IRSLEGSDVAAVNCVDFVDDGKYFLTGG-ADQIVK-MWMYRE  368 (515)
Q Consensus       323 ~~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~-i~d~~~  368 (515)
                      .+.+..     ......|+ +-...-.|.....++++++ .|+.++ +|-.-+
T Consensus       283 ~~~~~~e~~~~~~s~~~hd-Sl~YG~DWd~~~~~lATCsFYDk~~~~~Wl~~t  334 (339)
T KOG0280|consen  283 SSDKVLEFQIVLPSDKIHD-SLCYGGDWDSKDSFLATCSFYDKKIRQLWLHIT  334 (339)
T ss_pred             ecccccchheeeecccccc-ceeeccccccccceeeeeeccccceeeeeeecc
Confidence            443321     12222232 3333344433334566643 355433 554333

>KOG4547|consensus

Probab=99.46  E-value=2.4e-11  Score=108.75  Aligned_cols=190  Identities=15%  Similarity=0.132  Sum_probs=149.6

Q ss_pred             ecCCCEEEEEecCceEEEEECCCCceeEEeecc--CccCeEEEEe------CC--------------CCcEEEEEecCCc
Q psy17610         90 NPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTC--HTSAIYDLQF------PV--------------NFSSVFATCSKND  147 (515)
Q Consensus        90 s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~--h~~~v~~~~~------~~--------------~~~~l~~~~~d~~  147 (515)
                      .|-..++|....||.+++|+...++....+.+.  -.+..++..|      +|              |...++-+...|.
T Consensus         2 ~~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~   81 (541)
T KOG4547|consen    2 PPALDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGS   81 (541)
T ss_pred             CchhheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCcc
Confidence            356789999999999999999886443332211  1223333333      22              3335666667899


Q ss_pred             EEEEeCCCCceeEEEE--ecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEE
Q psy17610        148 IRIWSVRTLNELLRIS--VMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLL  225 (515)
Q Consensus       148 i~iw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  225 (515)
                      |.++++..++....+.  .|.+.|.++.++.+-..|.+++.|+.+..|+...++..... ......+.+++.+|||..++
T Consensus        82 v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~-~~~~~~~~sl~is~D~~~l~  160 (541)
T KOG4547|consen   82 VLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIW-KEQKPLVSSLCISPDGKILL  160 (541)
T ss_pred             EEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeee-ccCCCccceEEEcCCCCEEE
Confidence            9999999998888776  68889999999999999999999999999999999988877 57778899999999999999


Q ss_pred             EecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecC-----CCEEEEEe-CCCcEEEEEccc
Q psy17610        226 SGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSD-----SKEAMSAS-TDGTCVLWDLIK  284 (515)
Q Consensus       226 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~~~l~~~~-~d~~i~iwd~~~  284 (515)
                      +++  ++|++||+  ++.+.+..+.+|.++|.++.|..+     |.+++++. .+.-+.+|-...
T Consensus       161 ~as--~~ik~~~~--~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~  221 (541)
T KOG4547|consen  161 TAS--RQIKVLDI--ETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEK  221 (541)
T ss_pred             ecc--ceEEEEEc--cCceEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEEEEc
Confidence            887  57999999  677888999999999999999876     67766543 455677776554

>KOG4547|consensus

Probab=99.45  E-value=1.8e-11  Score=109.54  Aligned_cols=209  Identities=12%  Similarity=0.148  Sum_probs=155.2

Q ss_pred             CCCCceEEEecCCCCeEEEEcCCCCCCcccccccceEEeeccccccccccccccccccCcceeeeccceEEEEEecCCCc
Q psy17610          4 TPNDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMGCYGKLIKKKVSTKLKDVNAEDVSLYSAGVTALYLLKDDSG   83 (515)
Q Consensus         4 ~~~~~~~~~g~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (515)
                      +|-..|++..+.+|.+++|+..++..-..+.|....            +.......|..     + .+       .....
T Consensus         2 ~~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~------------s~t~~~~~w~L-----~-~~-------~s~~k   56 (541)
T KOG4547|consen    2 PPALDYFALSTGDGRLRIWDTAKNQLQQEFAPIASL------------SGTCTYTKWGL-----S-AD-------YSPMK   56 (541)
T ss_pred             CchhheEeecCCCCeEEEEEccCceeeeeeccchhc------------cCcceeEEEEE-----E-ec-------cchHH
Confidence            455678899999999999999888666555544110            00000111210     0 00       00000


Q ss_pred             EEEE----EEecCCCEEEEEecCceEEEEECCCCceeEEee-ccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCce
Q psy17610         84 ISSL----QYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVN-TCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNE  158 (515)
Q Consensus        84 v~~~----~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~  158 (515)
                      ..++    .-+-+...++-|...|.|.+|+...|+...++. .+|.+.|.++.++.+-..+.+++.|..+..|+...++.
T Consensus        57 ~~~~~~~~~~s~~t~~lvlgt~~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~  136 (541)
T KOG4547|consen   57 WLSLEKAKKASLDTSMLVLGTPQGSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVI  136 (541)
T ss_pred             HHhHHHHhhccCCceEEEeecCCccEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEeccccee
Confidence            1111    113345678889999999999999876555544 57999999999999988999999999999999999999


Q ss_pred             eEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCC-----CCEEEEe-cCCCc
Q psy17610        159 LLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQD-----GTRLLSG-GGEGQ  232 (515)
Q Consensus       159 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~~~l~~~-~~d~~  232 (515)
                      .+.....+..+.+++.+||+..+++++  +.|++||+++++.+..+ .+|.++|.++.|...     |.+++++ ..+..
T Consensus       137 ~~~~~~~~~~~~sl~is~D~~~l~~as--~~ik~~~~~~kevv~~f-tgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~  213 (541)
T KOG4547|consen  137 IRIWKEQKPLVSSLCISPDGKILLTAS--RQIKVLDIETKEVVITF-TGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERG  213 (541)
T ss_pred             eeeeccCCCccceEEEcCCCCEEEecc--ceEEEEEccCceEEEEe-cCCCcceEEEEEEEeccccccceeeeccccccc
Confidence            999999899999999999999999886  56999999999999999 799999999999876     6666654 44566


Q ss_pred             EEEEEccC
Q psy17610        233 VRIWKLTR  240 (515)
Q Consensus       233 i~iw~~~~  240 (515)
                      +.+|-...
T Consensus       214 i~~w~v~~  221 (541)
T KOG4547|consen  214 ITVWVVEK  221 (541)
T ss_pred             eeEEEEEc
Confidence            77887653

>KOG1064|consensus

Probab=99.43  E-value=1.5e-12  Score=130.14  Aligned_cols=205  Identities=13%  Similarity=0.236  Sum_probs=164.1

Q ss_pred             EEEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeC
Q psy17610         74 ALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSV  153 (515)
Q Consensus        74 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~  153 (515)
                      ......+-..|.++.=+|...+.++|+.||.+++|....+.++.....+....|+.+.|+.+|.....+..||.+.+|.+
T Consensus      2201 ~~~~k~~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~ 2280 (2439)
T KOG1064|consen 2201 SVMIKHPVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQA 2280 (2439)
T ss_pred             eeEeecccCceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeeccc
Confidence            34455566889999999999999999999999999999888777766666689999999999999999999999999998


Q ss_pred             CCCceeEEEEecCeEEEEEEEeeCCCEEEEEe---CCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCC
Q psy17610        154 RTLNELLRISVMNMICACIVFTYDGKAILSGW---NDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGE  230 (515)
Q Consensus       154 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  230 (515)
                      . .++....+.|+.....+.|-.  ..+++++   .++.+.+||..-......+...|.+.++++++.|..+.|++|+.+
T Consensus      2281 ~-pk~~~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qllisggr~ 2357 (2439)
T KOG1064|consen 2281 S-PKPYTSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLLISGGRK 2357 (2439)
T ss_pred             C-CcceeccccCCccccceeeee--hhhhccccCCCCCcccchhcccCcccceeeeecCCCceEEEEcCcceEEEecCCc
Confidence            7 566777778888888888865  4566654   467899999654433333336899999999999999999999999


Q ss_pred             CcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEc
Q psy17610        231 GQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMIL  293 (515)
Q Consensus       231 ~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~  293 (515)
                      |.|++||++.  .++.+.++.         +. ...++++++..|.++||++.....+..+..
T Consensus      2358 G~v~l~D~rq--rql~h~~~~---------~~-~~~~f~~~ss~g~ikIw~~s~~~ll~~~p~ 2408 (2439)
T KOG1064|consen 2358 GEVCLFDIRQ--RQLRHTFQA---------LD-TREYFVTGSSEGNIKIWRLSEFGLLHTFPS 2408 (2439)
T ss_pred             CcEEEeehHH--HHHHHHhhh---------hh-hhheeeccCcccceEEEEccccchhhcCch
Confidence            9999999953  333333322         33 557899999999999999987765555443

>KOG0280|consensus

Probab=99.40  E-value=1.4e-10  Score=94.79  Aligned_cols=224  Identities=14%  Similarity=0.132  Sum_probs=151.7

Q ss_pred             EEEEEeCCCeEEEEecCCCceEEEecCCCC------CCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeecccc
Q psy17610        180 AILSGWNDGFIRCFTPQSGKLKFIIPNAHN------RGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHT  253 (515)
Q Consensus       180 ~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~------~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~  253 (515)
                      .++-+-..|.|.++.....+....+ .+-.      ....++.|++.+..++++..+|.+.+-+......+..+.++.|.
T Consensus        87 ~l~~a~a~G~i~~~r~~~~~ss~~L-~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He  165 (339)
T KOG0280|consen   87 NLLDAHARGQIQLYRNDEDESSVHL-RGLSSKKISVVEALSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHE  165 (339)
T ss_pred             eeeeccccceEEEEeeccceeeeee-cccchhhhhheeeeEEEeeccCceEEEEcCCCcEEEEecceeeeeecccccccc
Confidence            4555666788888876544433333 1111      12457788998889999999999996665444444555788999


Q ss_pred             CceEEEEEec-CCCEEEEEeCCCcEEEEEcccce-EEE--EEEcCccEEEEEEcC-CCcEEEEEECCCeEEEEeCCC-Cc
Q psy17610        254 SSVSVIQIKS-DSKEAMSASTDGTCVLWDLIKST-RLI--IMILPSMIMSAAYHP-SEVQLITCSTNKMIDYWETCD-GS  327 (515)
Q Consensus       254 ~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~-~~~--~~~~~~~~~~~~~~~-~~~~l~~~~~~~~i~~~d~~~-~~  327 (515)
                      -+.....|+. +.+.+++|+.|+.+..||++... .+.  ...+...|.++.-+| .+.++++|+.|..|++||.+. ++
T Consensus       166 ~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~k  245 (339)
T KOG0280|consen  166 FEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGK  245 (339)
T ss_pred             eeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEEeccccceeeeehhcccC
Confidence            9999999875 45688999999999999999333 222  223455677777766 578999999999999999984 66


Q ss_pred             eEEEEecCCCccEEEEEEcCC--CCEEEEEcCCCeEEEEEccCC--e---eeeeccCCCCCeeEEEECCCCcEEEEEe-C
Q psy17610        328 IIRSLEGSDVAAVNCVDFVDD--GKYFLTGGADQIVKMWMYREG--V---PCFVGIGHAASITKIKISPDKKVIVSVS-A  399 (515)
Q Consensus       328 ~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~i~d~~~~--~---~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~  399 (515)
                      ++..-...  +.|..+..+|.  +++|+++-.+| .+|.+.+.+  +   .......|.+-...-.|......|+|++ .
T Consensus       246 Pl~~~~v~--GGVWRi~~~p~~~~~lL~~CMh~G-~ki~~~~~~~~e~~~~~~s~~~hdSl~YG~DWd~~~~~lATCsFY  322 (339)
T KOG0280|consen  246 PLFKAKVG--GGVWRIKHHPEIFHRLLAACMHNG-AKILDSSDKVLEFQIVLPSDKIHDSLCYGGDWDSKDSFLATCSFY  322 (339)
T ss_pred             ccccCccc--cceEEEEecchhhhHHHHHHHhcC-ceEEEecccccchheeeeccccccceeeccccccccceeeeeecc
Confidence            66555443  88999999984  33444444444 556665443  2   3344556766666666655456788875 3


Q ss_pred             CCcEE-EEe
Q psy17610        400 DGGIF-LWT  407 (515)
Q Consensus       400 dg~i~-iw~  407 (515)
                      |..++ +|-
T Consensus       323 Dk~~~~~Wl  331 (339)
T KOG0280|consen  323 DKKIRQLWL  331 (339)
T ss_pred             ccceeeeee
Confidence            66644 664

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.38  E-value=2.2e-09  Score=110.42  Aligned_cols=242  Identities=10%  Similarity=0.067  Sum_probs=161.8

Q ss_pred             EEEEEecC-CCEEEEEecCceEEEEECCCCceeEEeec-cC------------ccCeEEEEeCCCCcEEEEEec-CCcEE
Q psy17610         85 SSLQYNPV-NNKVFVGTVNCEIFLIDMNSGFTLTLVNT-CH------------TSAIYDLQFPVNFSSVFATCS-KNDIR  149 (515)
Q Consensus        85 ~~~~~s~~-~~~l~~~~~d~~i~iw~~~~~~~~~~~~~-~h------------~~~v~~~~~~~~~~~l~~~~~-d~~i~  149 (515)
                      ..++++++ ++++++-+.++.|+++|... ..+..+-. +.            -.....+++.+++..|+++.. .+.|+
T Consensus       571 ~gvavd~~~g~lyVaDs~n~rI~v~d~~G-~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~Ir  649 (1057)
T PLN02919        571 GKLAIDLLNNRLFISDSNHNRIVVTDLDG-NFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHALR  649 (1057)
T ss_pred             ceEEEECCCCeEEEEECCCCeEEEEeCCC-CEEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCceEE
Confidence            36889885 55555556678999999875 33333221 11            123578999998877766655 57799


Q ss_pred             EEeCCCCceeEEEEec-----------------CeEEEEEEEee-CCCEEEEEeCCCeEEEEecCCCceEEEecC-----
Q psy17610        150 IWSVRTLNELLRISVM-----------------NMICACIVFTY-DGKAILSGWNDGFIRCFTPQSGKLKFIIPN-----  206 (515)
Q Consensus       150 iw~~~~~~~~~~~~~~-----------------~~~v~~~~~~~-~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~-----  206 (515)
                      ++|..++. +.++.+.                 -.....++++| ++..+++.+.++.|++||..++........     
T Consensus       650 ~id~~~~~-V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~~~G~G~~~~  728 (1057)
T PLN02919        650 EIDFVNET-VRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRVFSGDGYERN  728 (1057)
T ss_pred             EEecCCCE-EEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEEEEecCCcccc
Confidence            99987653 4333211                 01235789999 455566667788999999887754321100     


Q ss_pred             --C------CCCCeEEEEEcCCCCEE-EEecCCCcEEEEEccCCceeeEEe-----------ec--------cccCceEE
Q psy17610        207 --A------HNRGVTALAITQDGTRL-LSGGGEGQVRIWKLTRESQSLQCV-----------LK--------EHTSSVSV  258 (515)
Q Consensus       207 --~------~~~~v~~~~~~~~~~~l-~~~~~d~~i~iw~~~~~~~~~~~~-----------~~--------~~~~~v~~  258 (515)
                        +      .-.....++++|+++.| ++-+.++.|++||+..........           +.        ..-.....
T Consensus       729 ~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~G  808 (1057)
T PLN02919        729 LNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLG  808 (1057)
T ss_pred             CCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCce
Confidence              0      11235679999998844 455667899999986433221110           00        00112357


Q ss_pred             EEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC--------------ccEEEEEEcCCCcEEEEEECCCeEEEEeCC
Q psy17610        259 IQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP--------------SMIMSAAYHPSEVQLITCSTNKMIDYWETC  324 (515)
Q Consensus       259 ~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~  324 (515)
                      ++++++|+.+++-..++.|++||..++.........              .....++++++|+.+++-+.++.|++||+.
T Consensus       809 vavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~  888 (1057)
T PLN02919        809 VLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLN  888 (1057)
T ss_pred             eeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEECC
Confidence            899999998888888999999999877655433211              146789999999988888889999999999


Q ss_pred             CCce
Q psy17610        325 DGSI  328 (515)
Q Consensus       325 ~~~~  328 (515)
                      +++.
T Consensus       889 ~~~~  892 (1057)
T PLN02919        889 KGEA  892 (1057)
T ss_pred             CCcc
Confidence            8865

>KOG1064|consensus

Probab=99.38  E-value=3.4e-12  Score=127.76  Aligned_cols=200  Identities=12%  Similarity=0.158  Sum_probs=162.6

Q ss_pred             CccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEE-ecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceE
Q psy17610        123 HTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRIS-VMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLK  201 (515)
Q Consensus       123 h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~  201 (515)
                      +-..|.++.-+|...+.++++.||.+++|....++.+..++ ..+..|+.+.|+.+|+.+..+..||.+.+|... .++.
T Consensus      2207 ~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~-pk~~ 2285 (2439)
T KOG1064|consen 2207 PVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQAS-PKPY 2285 (2439)
T ss_pred             ccCceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecccC-Ccce
Confidence            56678888899999999999999999999999998887776 233789999999999999999999999999977 3333


Q ss_pred             EEecCCCCCCeEEEEEcCCCCEEEEec---CCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEE
Q psy17610        202 FIIPNAHNRGVTALAITQDGTRLLSGG---GEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCV  278 (515)
Q Consensus       202 ~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~  278 (515)
                      ... +.|....+.+.|-.  ..+++++   .++.+.+||.......... -..|.+.++++++-|..+.|++|+.+|.|+
T Consensus      2286 ~s~-qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~v-~~~H~~gaT~l~~~P~~qllisggr~G~v~ 2361 (2439)
T KOG1064|consen 2286 TSW-QCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSLV-HTCHDGGATVLAYAPKHQLLISGGRKGEVC 2361 (2439)
T ss_pred             ecc-ccCCccccceeeee--hhhhccccCCCCCcccchhcccCccccee-eeecCCCceEEEEcCcceEEEecCCcCcEE
Confidence            333 68888888888875  5566654   5789999997544333222 278999999999999999999999999999


Q ss_pred             EEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCC
Q psy17610        279 LWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSD  336 (515)
Q Consensus       279 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~  336 (515)
                      +||++..+....+..        ++ ...++++++..|.++||++.....+..+...+
T Consensus      2362 l~D~rqrql~h~~~~--------~~-~~~~f~~~ss~g~ikIw~~s~~~ll~~~p~e~ 2410 (2439)
T KOG1064|consen 2362 LFDIRQRQLRHTFQA--------LD-TREYFVTGSSEGNIKIWRLSEFGLLHTFPSEH 2410 (2439)
T ss_pred             EeehHHHHHHHHhhh--------hh-hhheeeccCcccceEEEEccccchhhcCchhh
Confidence            999987766555443        44 66789999999999999999887777776543

>KOG0309|consensus

Probab=99.36  E-value=1.4e-11  Score=113.01  Aligned_cols=300  Identities=19%  Similarity=0.282  Sum_probs=200.4

Q ss_pred             EecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeec-cCccCeEEEEeCCC--CcEEEEEecCCcEEEEeC
Q psy17610         77 LLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNT-CHTSAIYDLQFPVN--FSSVFATCSKNDIRIWSV  153 (515)
Q Consensus        77 ~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~-~h~~~v~~~~~~~~--~~~l~~~~~d~~i~iw~~  153 (515)
                      .+.-.+++.++.++|.|+-+|.++.-| +.+.|+.........+. -..-.|..+.|+|.  -.+-++..+...-.+|++
T Consensus        20 sl~v~~~~~a~si~p~grdi~lAsr~g-l~i~dld~p~~ppr~l~h~tpw~vad~qws~h~a~~~wiVsts~qkaiiwnl   98 (1081)
T KOG0309|consen   20 SLKVDGGFNAVSINPSGRDIVLASRQG-LYIIDLDDPFTPPRWLHHITPWQVADVQWSPHPAKPYWIVSTSNQKAIIWNL   98 (1081)
T ss_pred             EEEecCcccceeeccccchhhhhhhcC-eEEEeccCCCCCceeeeccCcchhcceecccCCCCceeEEecCcchhhhhhh
Confidence            344678899999999999999998886 66778876544444433 12235777888764  345566666667778998


Q ss_pred             CCC---ceeEEEEecCeEEEEEEEeeCC-CEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecC
Q psy17610        154 RTL---NELLRISVMNMICACIVFTYDG-KAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGG  229 (515)
Q Consensus       154 ~~~---~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  229 (515)
                      ...   ..-..+.+|...++.+.|.|.. ..+++++.|-.+..||+++-.........-......++|+.....+++.+.
T Consensus        99 A~ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlassh  178 (1081)
T KOG0309|consen   99 AKSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSH  178 (1081)
T ss_pred             hcCCccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhcc
Confidence            632   2344567899999999999865 478899999999999998865433222344556678899885545555666


Q ss_pred             CCcEEEEEccCCceeeEEeeccccCceEEEEEecC-CCEEEEEeCCCcEEEEEcccceE--EEEEEcCccEEEEEEcCCC
Q psy17610        230 EGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSD-SKEAMSASTDGTCVLWDLIKSTR--LIIMILPSMIMSAAYHPSE  306 (515)
Q Consensus       230 d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~  306 (515)
                      ...|.+||.+. ...+...+++|...|..+.|..- ...+++.+.|++|+.||......  ........++....+.|-|
T Consensus       179 g~~i~vwd~r~-gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~vtt~~piw~~r~~Pfg  257 (1081)
T KOG0309|consen  179 GNDIFVWDLRK-GSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRTVTTNFPIWRGRYLPFG  257 (1081)
T ss_pred             CCceEEEeccC-CCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeecccccccccceeccccCcceeccccccC
Confidence            67899999984 45667788889999999988652 34578899999999999865432  2333333445444444433


Q ss_pred             cEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccC-CeeeeeccCCCCCeeEE
Q psy17610        307 VQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYRE-GVPCFVGIGHAASITKI  385 (515)
Q Consensus       307 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~i~~~  385 (515)
                      .-.                                ++-+.-.++.+-.---++....|+..+ .+++..+.+|...|...
T Consensus       258 ~g~--------------------------------~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eF  305 (1081)
T KOG0309|consen  258 EGY--------------------------------CIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEF  305 (1081)
T ss_pred             cee--------------------------------EeccccCCeeeeeccccchhhhhccccCCcceeeecCcchHHHHH
Confidence            211                                111111111111111122334454443 36788889999888777


Q ss_pred             EECCCC----------cEEEEEeCCCcEEEEeCCC
Q psy17610        386 KISPDK----------KVIVSVSADGGIFLWTFPE  410 (515)
Q Consensus       386 ~~~~~~----------~~l~~~~~dg~i~iw~~~~  410 (515)
                      .|-..+          -.|+|-+.|..+++|.+..
T Consensus       306 lWR~r~e~~~d~d~rdfQLVTWSkD~~lrlWpI~~  340 (1081)
T KOG0309|consen  306 LWRKRKECDGDYDSRDFQLVTWSKDQTLRLWPIDS  340 (1081)
T ss_pred             hhhhcccccCCCCccceeEEEeecCCceEeeeccH
Confidence            764422          2799999999999998764

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=99.35  E-value=1.8e-08  Score=87.35  Aligned_cols=218  Identities=15%  Similarity=0.156  Sum_probs=147.7

Q ss_pred             EEEEec-CCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeC-CCCcEEEEEecCCcEEEEeCCCCceeEEEE
Q psy17610         86 SLQYNP-VNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFP-VNFSSVFATCSKNDIRIWSVRTLNELLRIS  163 (515)
Q Consensus        86 ~~~~s~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~  163 (515)
                      +++|.+ ++.++++-...+.|+.|+..++........+    ...+++. +++ .++++... .+.++|..+++......
T Consensus         4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~~~~~~----~~G~~~~~~~g-~l~v~~~~-~~~~~d~~~g~~~~~~~   77 (246)
T PF08450_consen    4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEVIDLPG----PNGMAFDRPDG-RLYVADSG-GIAVVDPDTGKVTVLAD   77 (246)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEESSS----EEEEEEECTTS-EEEEEETT-CEEEEETTTTEEEEEEE
T ss_pred             ceEEECCCCEEEEEEcCCCEEEEEECCCCeEEEEecCC----CceEEEEccCC-EEEEEEcC-ceEEEecCCCcEEEEee
Confidence            578898 6666677667899999999986443333221    6777777 664 66666554 45556998886544444


Q ss_pred             e-----cCeEEEEEEEeeCCCEEEEEeCC--------CeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEE-EecC
Q psy17610        164 V-----MNMICACIVFTYDGKAILSGWND--------GFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLL-SGGG  229 (515)
Q Consensus       164 ~-----~~~~v~~~~~~~~~~~l~~~~~d--------g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~  229 (515)
                      .     .......+++.|+|+..++....        |.+..++.. ++.....  ..-...+.++|+|+++.|+ +-+.
T Consensus        78 ~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~--~~~~~pNGi~~s~dg~~lyv~ds~  154 (246)
T PF08450_consen   78 LPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVA--DGLGFPNGIAFSPDGKTLYVADSF  154 (246)
T ss_dssp             EETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEE--EEESSEEEEEEETTSSEEEEEETT
T ss_pred             ccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEe--cCcccccceEECCcchheeecccc
Confidence            3     34578899999999966665543        557777777 5543333  2345678999999998775 5567


Q ss_pred             CCcEEEEEccCCce--e---eEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC-ccEEEEEE-
Q psy17610        230 EGQVRIWKLTRESQ--S---LQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP-SMIMSAAY-  302 (515)
Q Consensus       230 d~~i~iw~~~~~~~--~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~-  302 (515)
                      .+.|..+++.....  .   ....+....+....+++..+|+..++....+.|.+++.. ++.+..+..+ ..+++++| 
T Consensus       155 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~~~~i~~p~~~~t~~~fg  233 (246)
T PF08450_consen  155 NGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-GKLLREIELPVPRPTNCAFG  233 (246)
T ss_dssp             TTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-SCEEEEEE-SSSSEEEEEEE
T ss_pred             cceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-ccEEEEEcCCCCCEEEEEEE
Confidence            78899999864333  1   111222222347889999999988887788999999987 8888888877 68999999 


Q ss_pred             cCCCcEEEEEE
Q psy17610        303 HPSEVQLITCS  313 (515)
Q Consensus       303 ~~~~~~l~~~~  313 (515)
                      -++.+.|++.+
T Consensus       234 g~~~~~L~vTt  244 (246)
T PF08450_consen  234 GPDGKTLYVTT  244 (246)
T ss_dssp             STTSSEEEEEE
T ss_pred             CCCCCEEEEEe
Confidence            46666665543

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>KOG4190|consensus

Probab=99.35  E-value=8.5e-12  Score=110.62  Aligned_cols=281  Identities=15%  Similarity=0.175  Sum_probs=189.2

Q ss_pred             eeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCC-------CceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEE
Q psy17610        119 VNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRT-------LNELLRISVMNMICACIVFTYDGKAILSGWNDGFIR  191 (515)
Q Consensus       119 ~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~  191 (515)
                      .+.||+..|..++--.+.+.+++++.|++|++|.++.       ..+..+++.|+.+|..+.|-.+.++++++  ||-|+
T Consensus       730 nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~Sc--D~giH  807 (1034)
T KOG4190|consen  730 NFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASC--DGGIH  807 (1034)
T ss_pred             cccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeec--cCcce
Confidence            4678999999988777778899999999999999873       23566788999999999999998877765  78899


Q ss_pred             EEecCCCceEEEecC-CCCCCeEEEEEcC--CCCEEEEe-cCCCcEEEEEccCCceeeEEee---ccccCceEEEEEecC
Q psy17610        192 CFTPQSGKLKFIIPN-AHNRGVTALAITQ--DGTRLLSG-GGEGQVRIWKLTRESQSLQCVL---KEHTSSVSVIQIKSD  264 (515)
Q Consensus       192 ~~~~~~~~~~~~~~~-~~~~~v~~~~~~~--~~~~l~~~-~~d~~i~iw~~~~~~~~~~~~~---~~~~~~v~~~~~~~~  264 (515)
                      +||.--++++..... +..+.+..+..-+  +...++.| +...+|+++|.+..........   ++...-+.+++..+.
T Consensus       808 lWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaVa~~  887 (1034)
T KOG4190|consen  808 LWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAVADK  887 (1034)
T ss_pred             eecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEEEeccC
Confidence            999988877653321 2223333333333  34444444 6788999999976554443332   344566889999999


Q ss_pred             CCEEEEEeCCCcEEEEEcccceEEEEEEcCc-cEEEEEEcCCCcEEEEEECCCeEEE-EeCCCCceEEEEecCCCccEEE
Q psy17610        265 SKEAMSASTDGTCVLWDLIKSTRLIIMILPS-MIMSAAYHPSEVQLITCSTNKMIDY-WETCDGSIIRSLEGSDVAAVNC  342 (515)
Q Consensus       265 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~i~~-~d~~~~~~~~~~~~~~~~~i~~  342 (515)
                      |+.++.+-.+|.|.+.|.++++.+....... ....+ -.|..+.++....+.++.+ |...++....+.+.+. .+..-
T Consensus       888 GN~lAa~LSnGci~~LDaR~G~vINswrpmecdllql-aapsdq~L~~saldHslaVnWhaldgimh~q~kppp-epahf  965 (1034)
T KOG4190|consen  888 GNKLAAALSNGCIAILDARNGKVINSWRPMECDLLQL-AAPSDQALAQSALDHSLAVNWHALDGIMHLQDKPPP-EPAHF  965 (1034)
T ss_pred             cchhhHHhcCCcEEEEecCCCceeccCCcccchhhhh-cCchhHHHHhhcccceeEeeehhcCCeeeeccCCCC-cchhh
Confidence            9999999999999999999998776544322 11111 1355666777777788877 8776666555544332 22111


Q ss_pred             EEEcCCCCEEEEEcCCCeEEEEEccCC----eeeeec--cCCCCCeeEEEECCCCcEEEEEeCCCcEEE
Q psy17610        343 VDFVDDGKYFLTGGADQIVKMWMYREG----VPCFVG--IGHAASITKIKISPDKKVIVSVSADGGIFL  405 (515)
Q Consensus       343 ~~~~~~~~~l~~~~~dg~i~i~d~~~~----~~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i  405 (515)
                        ...-|.-|++....+.+.+|.-...    ..+..+  ....+..++++.-|-..-+..|...|.|.+
T Consensus       966 --lqsvgpSLV~a~~Gn~lgVYad~a~~ha~stitKiR~d~f~G~lTala~LPLN~afLaGne~G~IaL 1032 (1034)
T KOG4190|consen  966 --LQSVGPSLVTAQNGNILGVYADSAELHAESTITKIRPDEFPGTLTALAPLPLNCAFLAGNEHGAIAL 1032 (1034)
T ss_pred             --hhccCceeEEeccCcEEEEEecchhhhhhhhhccccccccCCccceeeeccccchhhccCCCCceee
Confidence              1123555777776667777742110    111112  233566788888887766777888888765

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.34  E-value=5.7e-09  Score=107.38  Aligned_cols=243  Identities=10%  Similarity=0.098  Sum_probs=159.4

Q ss_pred             EEEEeCCCCcEEE-EEecCCcEEEEeCCCCceeEEEEec--------------CeEEEEEEEeeCCCEEEEEeC-CCeEE
Q psy17610        128 YDLQFPVNFSSVF-ATCSKNDIRIWSVRTLNELLRISVM--------------NMICACIVFTYDGKAILSGWN-DGFIR  191 (515)
Q Consensus       128 ~~~~~~~~~~~l~-~~~~d~~i~iw~~~~~~~~~~~~~~--------------~~~v~~~~~~~~~~~l~~~~~-dg~i~  191 (515)
                      ..+++++++..++ +-+..+.|+++|.. ++.+..+...              -.....+++.++++.|+++.. .+.|+
T Consensus       571 ~gvavd~~~g~lyVaDs~n~rI~v~d~~-G~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~Ir  649 (1057)
T PLN02919        571 GKLAIDLLNNRLFISDSNHNRIVVTDLD-GNFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHALR  649 (1057)
T ss_pred             ceEEEECCCCeEEEEECCCCeEEEEeCC-CCEEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCceEE
Confidence            4678887544444 44557889999975 4444443321              012477899998887766554 56799


Q ss_pred             EEecCCCceEEEecCCC---------------CCCeEEEEEcC-CCCEEEEecCCCcEEEEEccCCceeeEE------ee
Q psy17610        192 CFTPQSGKLKFIIPNAH---------------NRGVTALAITQ-DGTRLLSGGGEGQVRIWKLTRESQSLQC------VL  249 (515)
Q Consensus       192 ~~~~~~~~~~~~~~~~~---------------~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~------~~  249 (515)
                      .+|+.++........+.               -.....++++| ++..+++.+.++.|++||..........      ..
T Consensus       650 ~id~~~~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~~~G~G~~~~~  729 (1057)
T PLN02919        650 EIDFVNETVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRVFSGDGYERNL  729 (1057)
T ss_pred             EEecCCCEEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEEEEecCCccccC
Confidence            99987765432110000               12346899999 5666677778899999998543211100      00


Q ss_pred             cc------ccCceEEEEEecCCCEEE-EEeCCCcEEEEEcccceEEEEEEc----------------------CccEEEE
Q psy17610        250 KE------HTSSVSVIQIKSDSKEAM-SASTDGTCVLWDLIKSTRLIIMIL----------------------PSMIMSA  300 (515)
Q Consensus       250 ~~------~~~~v~~~~~~~~~~~l~-~~~~d~~i~iwd~~~~~~~~~~~~----------------------~~~~~~~  300 (515)
                      .+      .-.....++++|+++.++ +-+.++.|++||+.++........                      -.....+
T Consensus       730 ~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gv  809 (1057)
T PLN02919        730 NGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGV  809 (1057)
T ss_pred             CCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCcee
Confidence            01      112356799999998554 555678999999987653221100                      0124688


Q ss_pred             EEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecC------------CCccEEEEEEcCCCCEEEEEcCCCeEEEEEccC
Q psy17610        301 AYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGS------------DVAAVNCVDFVDDGKYFLTGGADQIVKMWMYRE  368 (515)
Q Consensus       301 ~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~------------~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~  368 (515)
                      ++++++..+++-..++.|++||..++.........            .......++++++|+++++-+.++.|++||+.+
T Consensus       810 avd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~  889 (1057)
T PLN02919        810 LCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLNK  889 (1057)
T ss_pred             eEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEECCC
Confidence            99999998888888999999999877655332211            112567899999999999888999999999988


Q ss_pred             Cee
Q psy17610        369 GVP  371 (515)
Q Consensus       369 ~~~  371 (515)
                      ++.
T Consensus       890 ~~~  892 (1057)
T PLN02919        890 GEA  892 (1057)
T ss_pred             Ccc
Confidence            754

>KOG4190|consensus

Probab=99.34  E-value=1.1e-11  Score=109.98  Aligned_cols=279  Identities=14%  Similarity=0.201  Sum_probs=190.8

Q ss_pred             CCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCC-----ceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEE
Q psy17610        206 NAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRE-----SQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLW  280 (515)
Q Consensus       206 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw  280 (515)
                      .+|+..|..++--.+.+-+++++.|++|++|.++.+     +..+..++..|+.+|..+.|-.+.+++++  .||.|.+|
T Consensus       732 ~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~S--cD~giHlW  809 (1034)
T KOG4190|consen  732 TGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIAS--CDGGIHLW  809 (1034)
T ss_pred             cCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeee--ccCcceee
Confidence            689999998887778888999999999999999643     23467788899999999999988777765  47889999


Q ss_pred             EcccceEEEEEEc---CccEEEEEEcC--CCcEEEEE-ECCCeEEEEeCCCCceEEEEecC----CCccEEEEEEcCCCC
Q psy17610        281 DLIKSTRLIIMIL---PSMIMSAAYHP--SEVQLITC-STNKMIDYWETCDGSIIRSLEGS----DVAAVNCVDFVDDGK  350 (515)
Q Consensus       281 d~~~~~~~~~~~~---~~~~~~~~~~~--~~~~l~~~-~~~~~i~~~d~~~~~~~~~~~~~----~~~~i~~~~~~~~~~  350 (515)
                      |.--++.+..+..   ++....+..-+  +...++++ +...+++++|.+.++-..+++..    ...-+++++..+.|+
T Consensus       810 DPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaVa~~GN  889 (1034)
T KOG4190|consen  810 DPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAVADKGN  889 (1034)
T ss_pred             cccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEEEeccCcc
Confidence            9877766553322   12223333333  33444444 66889999999998877666532    225688999999999


Q ss_pred             EEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEE-EeCCCCcCccCCCcccceeeeccc
Q psy17610        351 YFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFL-WTFPELEDDVGDSRSLSSKISRST  429 (515)
Q Consensus       351 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i-w~~~~~~~~~~~~~~~~~~~~~~~  429 (515)
                      .++++-.+|.|.+.|.++|+.+..++.-......++- |..+.|+....|.++.+ |-...+............      
T Consensus       890 ~lAa~LSnGci~~LDaR~G~vINswrpmecdllqlaa-psdq~L~~saldHslaVnWhaldgimh~q~kpppep------  962 (1034)
T KOG4190|consen  890 KLAAALSNGCIAILDARNGKVINSWRPMECDLLQLAA-PSDQALAQSALDHSLAVNWHALDGIMHLQDKPPPEP------  962 (1034)
T ss_pred             hhhHHhcCCcEEEEecCCCceeccCCcccchhhhhcC-chhHHHHhhcccceeEeeehhcCCeeeeccCCCCcc------
Confidence            9999999999999999999998888776666555554 45556777777888887 754433211111100000      


Q ss_pred             ccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCe-----eeeeecc-cccceEEEEEEcCCCcEEEEee
Q psy17610        430 ARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGS-----IIRSLEG-SDVAAVNCVDFVDDGKYFLTGG  503 (515)
Q Consensus       430 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~-----~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~  503 (515)
                                      .--.-.-|..|+++.....+.+|.- .++     .+..+.. .-.+..++++.-|-+.-+..|.
T Consensus       963 ----------------ahflqsvgpSLV~a~~Gn~lgVYad-~a~~ha~stitKiR~d~f~G~lTala~LPLN~afLaGn 1025 (1034)
T KOG4190|consen  963 ----------------AHFLQSVGPSLVTAQNGNILGVYAD-SAELHAESTITKIRPDEFPGTLTALAPLPLNCAFLAGN 1025 (1034)
T ss_pred             ----------------hhhhhccCceeEEeccCcEEEEEec-chhhhhhhhhccccccccCCccceeeeccccchhhccC
Confidence                            0001112556677666666777752 111     1112221 1125678889889888888899


Q ss_pred             cCCeEEE
Q psy17610        504 ADQIVKI  510 (515)
Q Consensus       504 ~dg~v~i  510 (515)
                      +.|.|++
T Consensus      1026 e~G~IaL 1032 (1034)
T KOG4190|consen 1026 EHGAIAL 1032 (1034)
T ss_pred             CCCceee
Confidence            9998876

>PRK04043 tolB translocation protein TolB; Provisional

Probab=99.33  E-value=1.5e-09  Score=100.38  Aligned_cols=192  Identities=13%  Similarity=0.084  Sum_probs=125.5

Q ss_pred             CcEEEEEEecCCCE-EEEEec---CceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec---CCcEEEEeCC
Q psy17610         82 SGISSLQYNPVNNK-VFVGTV---NCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS---KNDIRIWSVR  154 (515)
Q Consensus        82 ~~v~~~~~s~~~~~-l~~~~~---d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~---d~~i~iw~~~  154 (515)
                      +......|||||+. ++..+.   +..|+++|+.+++..... . ..+......|+|||+.++....   +..|.++|+.
T Consensus       188 ~~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt-~-~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~  265 (419)
T PRK04043        188 GLNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIA-S-SQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTN  265 (419)
T ss_pred             CCeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEe-c-CCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECC
Confidence            37889999999985 664433   357999999987544333 2 4555667889999988876654   3468888887


Q ss_pred             CCceeEEEEecCeEEEEEEEeeCCCEEEEEeCC-C--eEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCC-
Q psy17610        155 TLNELLRISVMNMICACIVFTYDGKAILSGWND-G--FIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGE-  230 (515)
Q Consensus       155 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g--~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-  230 (515)
                      +++ ...+..+........|+|||+.|+..+.. +  .|.+.|+.+++.......+..    ...|+|+|+.++..... 
T Consensus       266 ~g~-~~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~g~~----~~~~SPDG~~Ia~~~~~~  340 (419)
T PRK04043        266 TKT-LTQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVFHGKN----NSSVSTYKNYIVYSSRET  340 (419)
T ss_pred             CCc-EEEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCccCCCc----CceECCCCCEEEEEEcCC
Confidence            765 44455444334456899999988876643 2  688889888877544322221    24899999988866543 


Q ss_pred             --------CcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCC---cEEEEEccc
Q psy17610        231 --------GQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDG---TCVLWDLIK  284 (515)
Q Consensus       231 --------~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---~i~iwd~~~  284 (515)
                              ..|.+.|+.......   +... .......|+|||+.++....++   .+.+.++..
T Consensus       341 ~~~~~~~~~~I~v~d~~~g~~~~---LT~~-~~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l~g  401 (419)
T PRK04043        341 NNEFGKNTFNLYLISTNSDYIRR---LTAN-GVNQFPRFSSDGGSIMFIKYLGNQSALGIIRLNY  401 (419)
T ss_pred             CcccCCCCcEEEEEECCCCCeEE---CCCC-CCcCCeEECCCCCEEEEEEccCCcEEEEEEecCC
Confidence                    257777775443322   2222 2233578999999887766432   345555543

>PRK02888 nitrous-oxide reductase; Validated

Probab=99.33  E-value=2e-09  Score=100.01  Aligned_cols=353  Identities=12%  Similarity=0.070  Sum_probs=200.2

Q ss_pred             EEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEe
Q psy17610         96 VFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFT  175 (515)
Q Consensus        96 l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~  175 (515)
                      +.+|+..|.++|+-+.+++.+..+---...+-+.--+....+.++..+..+....|.    .      .|.-.++.-.=.
T Consensus        69 f~SgG~sG~~~v~G~PSmr~l~~ipvf~~~~~~G~G~~~esk~~l~~~~~~~~~~~g----D------~HHp~~s~t~g~  138 (635)
T PRK02888         69 FWSGGHSGEVRILGLPSMRELMRIPVFNRDSATGWGITNESKKVLGEGARGGKYLNG----D------THHPHMSFTDGT  138 (635)
T ss_pred             EeeCCccceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHhhccccCCcccCC----C------cCCCcccccCCc
Confidence            567888999999999997766654211111111111222222233221111111221    0      111111111112


Q ss_pred             eCCCEEEEEeC-CCeEEEEecCCCceEEEecCCCCCCeEEEEEc--CCCCEEEEecCCCcEEEEEccCCceeeEEeeccc
Q psy17610        176 YDGKAILSGWN-DGFIRCFTPQSGKLKFIIPNAHNRGVTALAIT--QDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEH  252 (515)
Q Consensus       176 ~~~~~l~~~~~-dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~  252 (515)
                      .||++|+.-.. +..|...+++..++...+..+....+..+++-  |+..+++.+++.                      
T Consensus       139 ydGr~~findk~n~Rvari~l~~~~~~~i~~iPn~~~~Hg~~~~~~p~t~yv~~~~e~----------------------  196 (635)
T PRK02888        139 YDGRYLFINDKANTRVARIRLDVMKCDKITELPNVQGIHGLRPQKIPRTGYVFCNGEF----------------------  196 (635)
T ss_pred             cceeEEEEecCCCcceEEEECccEeeceeEeCCCccCccccCccccCCccEEEeCccc----------------------
Confidence            37788887764 55677777777666555545566667777775  666676665442                      


Q ss_pred             cCceEEEEEecCCCEEEE-EeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECC----CeEEEEeCCCCc
Q psy17610        253 TSSVSVIQIKSDSKEAMS-ASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTN----KMIDYWETCDGS  327 (515)
Q Consensus       253 ~~~v~~~~~~~~~~~l~~-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~i~~~d~~~~~  327 (515)
                           .+-++|||+.+.. .-..+.+.+.|..+.+....+..+.....+.++|+++++++.+.+    ..+...+.....
T Consensus       197 -----~~PlpnDGk~l~~~~ey~~~vSvID~etmeV~~qV~Vdgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d  271 (635)
T PRK02888        197 -----RIPLPNDGKDLDDPKKYRSLFTAVDAETMEVAWQVMVDGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERD  271 (635)
T ss_pred             -----ccccCCCCCEeecccceeEEEEEEECccceEEEEEEeCCCcccceECCCCCEEEEeccCcccCcceeeeccccCc
Confidence                 1112334443322 222456777788888888888888888889999999999888642    233333332222


Q ss_pred             eEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccC----CeeeeeccCCCCCeeEEEECCCCcEEEEEeC-CCc
Q psy17610        328 IIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYRE----GVPCFVGIGHAASITKIKISPDKKVIVSVSA-DGG  402 (515)
Q Consensus       328 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~----~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~  402 (515)
                      ....+....     .-++.++|++...+  ++.|.+.|..+    +..+.....-......+.++|||+++++++. +.+
T Consensus       272 ~~vvfni~~-----iea~vkdGK~~~V~--gn~V~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVanklS~t  344 (635)
T PRK02888        272 WVVVFNIAR-----IEEAVKAGKFKTIG--GSKVPVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIANGKLSPT  344 (635)
T ss_pred             eEEEEchHH-----HHHhhhCCCEEEEC--CCEEEEEECCccccCCcceEEEEECCCCccceEECCCCCEEEEeCCCCCc
Confidence            222221110     01334578877663  57899999988    3333333344566788999999999887765 889


Q ss_pred             EEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCC----------
Q psy17610        403 IFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCD----------  472 (515)
Q Consensus       403 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~----------  472 (515)
                      +.+.|+.+................         ............+|.++|....+-.-|..|..|++.+          
T Consensus       345 VSVIDv~k~k~~~~~~~~~~~~vv---------aevevGlGPLHTaFDg~G~aytslf~dsqv~kwn~~~a~~~~~g~~~  415 (635)
T PRK02888        345 VTVIDVRKLDDLFDGKIKPRDAVV---------AEPELGLGPLHTAFDGRGNAYTTLFLDSQIVKWNIEAAIRAYKGEKV  415 (635)
T ss_pred             EEEEEChhhhhhhhccCCccceEE---------EeeccCCCcceEEECCCCCEEEeEeecceeEEEehHHHHHHhccccC
Confidence            999999876542211111110000         0001122355678999998888888899999999876          


Q ss_pred             CeeeeeecccccceEEEEE------EcCCCcEEEEee
Q psy17610        473 GSIIRSLEGSDVAAVNCVD------FVDDGKYFLTGG  503 (515)
Q Consensus       473 ~~~~~~~~~~~~~~v~~~~------~s~~~~~l~s~~  503 (515)
                      ...+..+.-|-  .+-.+.      -.|||++|++..
T Consensus       416 ~~v~~k~dV~y--~pgh~~~~~g~t~~~dgk~l~~~n  450 (635)
T PRK02888        416 DPIVQKLDVHY--QPGHNHASMGETKEADGKWLVSLN  450 (635)
T ss_pred             CcceecccCCC--ccceeeecCCCcCCCCCCEEEEcc
Confidence            23444444331  222222      367888888753

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=99.31  E-value=9.3e-09  Score=95.77  Aligned_cols=302  Identities=12%  Similarity=0.070  Sum_probs=183.1

Q ss_pred             CCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeE------EEEEcC--CCCEEEEecCCCcEEEEEccCCceeeEEee
Q psy17610        178 GKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVT------ALAITQ--DGTRLLSGGGEGQVRIWKLTRESQSLQCVL  249 (515)
Q Consensus       178 ~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~------~~~~~~--~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~  249 (515)
                      +..+++++.++.+..+|.++|+.+............      .+.-.|  .+..++.++.++.+.-+|..+++.......
T Consensus        69 ~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~  148 (394)
T PRK11138         69 YNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTVAGGKVYIGSEKGQVYALNAEDGEVAWQTKV  148 (394)
T ss_pred             CCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEEECCEEEEEcCCCEEEEEECCCCCCcccccC
Confidence            557888888899999999999988766322211100      001111  345677788899999999865544333332


Q ss_pred             ccccCceEE-EEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEE--EEcC--CCcEEEEEECCCeEEEEeCC
Q psy17610        250 KEHTSSVSV-IQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSA--AYHP--SEVQLITCSTNKMIDYWETC  324 (515)
Q Consensus       250 ~~~~~~v~~-~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~--~~~~--~~~~l~~~~~~~~i~~~d~~  324 (515)
                      .+   .+.+ ...  .+..++.+..++.+..+|.++++.+.......+....  .-+|  .+..++.+..++.+..+|..
T Consensus       149 ~~---~~~ssP~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~sP~v~~~~v~~~~~~g~v~a~d~~  223 (394)
T PRK11138        149 AG---EALSRPVV--SDGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRGESAPATAFGGAIVGGDNGRVSAVLME  223 (394)
T ss_pred             CC---ceecCCEE--ECCEEEEECCCCEEEEEEccCCCEeeeecCCCCcccccCCCCCEEECCEEEEEcCCCEEEEEEcc
Confidence            22   1111 111  2456777888899999999999988777654321110  0112  23457778889999999999


Q ss_pred             CCceEEEEecCCCc------cEEEEEEcC--CCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEE
Q psy17610        325 DGSIIRSLEGSDVA------AVNCVDFVD--DGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVS  396 (515)
Q Consensus       325 ~~~~~~~~~~~~~~------~i~~~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~  396 (515)
                      +++.+.+.......      ....+..+|  .+..+++++.+|.+..+|..+|+.+.....  .....+..  .+..++.
T Consensus       224 ~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG~~~W~~~~--~~~~~~~~--~~~~vy~  299 (394)
T PRK11138        224 QGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSGQIVWKREY--GSVNDFAV--DGGRIYL  299 (394)
T ss_pred             CChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEECCCCCEEEeecC--CCccCcEE--ECCEEEE
Confidence            99877665422100      011111223  245677777899999999999987765432  11112222  4567777


Q ss_pred             EeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeee
Q psy17610        397 VSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSII  476 (515)
Q Consensus       397 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~  476 (515)
                      ++.+|.+...|..+++..-..... ..                  ........  .+.+|+.++.+|.++..|..+|+.+
T Consensus       300 ~~~~g~l~ald~~tG~~~W~~~~~-~~------------------~~~~sp~v--~~g~l~v~~~~G~l~~ld~~tG~~~  358 (394)
T PRK11138        300 VDQNDRVYALDTRGGVELWSQSDL-LH------------------RLLTAPVL--YNGYLVVGDSEGYLHWINREDGRFV  358 (394)
T ss_pred             EcCCCeEEEEECCCCcEEEccccc-CC------------------CcccCCEE--ECCEEEEEeCCCEEEEEECCCCCEE
Confidence            888999999998766421111000 00                  00111111  2557788899999999999999988


Q ss_pred             eeecccccceEEE-EEEcCCCcEEEEeecCCeEEEEE
Q psy17610        477 RSLEGSDVAAVNC-VDFVDDGKYFLTGGADQIVKICL  512 (515)
Q Consensus       477 ~~~~~~~~~~v~~-~~~s~~~~~l~s~~~dg~v~iw~  512 (515)
                      ...+-.. ..+.+ ..+  .+..|+.++.||.|..++
T Consensus       359 ~~~~~~~-~~~~s~P~~--~~~~l~v~t~~G~l~~~~  392 (394)
T PRK11138        359 AQQKVDS-SGFLSEPVV--ADDKLLIQARDGTVYAIT  392 (394)
T ss_pred             EEEEcCC-CcceeCCEE--ECCEEEEEeCCceEEEEe
Confidence            7775432 22322 222  234688889999888765

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=99.29  E-value=5.2e-08  Score=84.41  Aligned_cols=220  Identities=15%  Similarity=0.101  Sum_probs=147.3

Q ss_pred             EEEEee-CCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEc-CCCCEEEEecCCCcEEEEEccCCceeeEEe
Q psy17610        171 CIVFTY-DGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAIT-QDGTRLLSGGGEGQVRIWKLTRESQSLQCV  248 (515)
Q Consensus       171 ~~~~~~-~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~  248 (515)
                      ++.|.+ ++.++++-...+.|..|+..+++..... ...   ...+.+. +++. ++.+.. +.+.++|..+........
T Consensus         4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~~~-~~~---~~G~~~~~~~g~-l~v~~~-~~~~~~d~~~g~~~~~~~   77 (246)
T PF08450_consen    4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEVID-LPG---PNGMAFDRPDGR-LYVADS-GGIAVVDPDTGKVTVLAD   77 (246)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEE-SSS---EEEEEEECTTSE-EEEEET-TCEEEEETTTTEEEEEEE
T ss_pred             ceEEECCCCEEEEEEcCCCEEEEEECCCCeEEEEe-cCC---CceEEEEccCCE-EEEEEc-CceEEEecCCCcEEEEee
Confidence            567888 5666666667899999999888765432 122   6777887 5654 555555 445666886555444444


Q ss_pred             ec--c-ccCceEEEEEecCCCEEEEEeCC--------CcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEE-EECCC
Q psy17610        249 LK--E-HTSSVSVIQIKSDSKEAMSASTD--------GTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLIT-CSTNK  316 (515)
Q Consensus       249 ~~--~-~~~~v~~~~~~~~~~~l~~~~~d--------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~  316 (515)
                      ..  . .....+.+++.++|+..++....        |.+..++.. ++.......-.....++|+|+++.|++ -+..+
T Consensus        78 ~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~~~~~pNGi~~s~dg~~lyv~ds~~~  156 (246)
T PF08450_consen   78 LPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVADGLGFPNGIAFSPDGKTLYVADSFNG  156 (246)
T ss_dssp             EETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEEEESSEEEEEEETTSSEEEEEETTTT
T ss_pred             ccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEecCcccccceEECCcchheeecccccc
Confidence            42  1 34567899999999977766543        457777776 555555555566889999999997765 45678


Q ss_pred             eEEEEeCCCCce----EEEE-ecCCC-ccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEE-CC
Q psy17610        317 MIDYWETCDGSI----IRSL-EGSDV-AAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKI-SP  389 (515)
Q Consensus       317 ~i~~~d~~~~~~----~~~~-~~~~~-~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~-~~  389 (515)
                      .|..+++.....    .+.+ ..... +....+++..+|++.++....+.|.+++.+ |+.+..+.-....+++++| -+
T Consensus       157 ~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~~~~i~~p~~~~t~~~fgg~  235 (246)
T PF08450_consen  157 RIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-GKLLREIELPVPRPTNCAFGGP  235 (246)
T ss_dssp             EEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-SCEEEEEE-SSSSEEEEEEEST
T ss_pred             eeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-ccEEEEEcCCCCCEEEEEEECC
Confidence            899998853221    1222 22221 347889999999988888888999999987 8877776655568999999 46


Q ss_pred             CCcEEEEEe
Q psy17610        390 DKKVIVSVS  398 (515)
Q Consensus       390 ~~~~l~~~~  398 (515)
                      +.+.|+..+
T Consensus       236 ~~~~L~vTt  244 (246)
T PF08450_consen  236 DGKTLYVTT  244 (246)
T ss_dssp             TSSEEEEEE
T ss_pred             CCCEEEEEe
Confidence            766665543

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>PRK04043 tolB translocation protein TolB; Provisional

Probab=99.26  E-value=1.6e-08  Score=93.54  Aligned_cols=211  Identities=9%  Similarity=-0.020  Sum_probs=133.1

Q ss_pred             ceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcE-EEEEecC---CcEEEEeCCCCceeEEEEecCeEEEEEEEeeCC
Q psy17610        103 CEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSS-VFATCSK---NDIRIWSVRTLNELLRISVMNMICACIVFTYDG  178 (515)
Q Consensus       103 ~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~~~~~d---~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~  178 (515)
                      ..|.+-|.+. .....+..+  +......|+|||+. ++..+.+   ..|.++|+.+++..... ...+......|+|||
T Consensus       169 ~~l~~~d~dg-~~~~~~~~~--~~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt-~~~g~~~~~~~SPDG  244 (419)
T PRK04043        169 SNIVLADYTL-TYQKVIVKG--GLNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIA-SSQGMLVVSDVSKDG  244 (419)
T ss_pred             ceEEEECCCC-CceeEEccC--CCeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEe-cCCCcEEeeEECCCC
Confidence            4677777765 334434433  37889999999985 5544443   45888999887654433 345555677899999


Q ss_pred             CEEEEEe-C--CCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecC-CC--cEEEEEccCCceeeEEeeccc
Q psy17610        179 KAILSGW-N--DGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGG-EG--QVRIWKLTRESQSLQCVLKEH  252 (515)
Q Consensus       179 ~~l~~~~-~--dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~--~i~iw~~~~~~~~~~~~~~~~  252 (515)
                      +.++... .  +..|.++|+.+++.....  .+........|+|||+.|+..+. .+  .|.+.|+..+....+ ...+.
T Consensus       245 ~~la~~~~~~g~~~Iy~~dl~~g~~~~LT--~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rl-t~~g~  321 (419)
T PRK04043        245 SKLLLTMAPKGQPDIYLYDTNTKTLTQIT--NYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQV-VFHGK  321 (419)
T ss_pred             CEEEEEEccCCCcEEEEEECCCCcEEEcc--cCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeC-ccCCC
Confidence            8777543 2  356888898888754432  23332345689999998776553 33  566667653332221 11121


Q ss_pred             cCceEEEEEecCCCEEEEEeCC---------CcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCC---eEEE
Q psy17610        253 TSSVSVIQIKSDSKEAMSASTD---------GTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNK---MIDY  320 (515)
Q Consensus       253 ~~~v~~~~~~~~~~~l~~~~~d---------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~i~~  320 (515)
                        .  ...|+|+|+.++.....         ..|.+.|+.++....... ........|+|||+.++.....+   .+.+
T Consensus       322 --~--~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~~~LT~-~~~~~~p~~SPDG~~I~f~~~~~~~~~L~~  396 (419)
T PRK04043        322 --N--NSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYIRRLTA-NGVNQFPRFSSDGGSIMFIKYLGNQSALGI  396 (419)
T ss_pred             --c--CceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCeEECCC-CCCcCCeEECCCCCEEEEEEccCCcEEEEE
Confidence              1  24899999998877654         267888887776543333 33344688999999887765432   3556


Q ss_pred             EeCCC
Q psy17610        321 WETCD  325 (515)
Q Consensus       321 ~d~~~  325 (515)
                      +++..
T Consensus       397 ~~l~g  401 (419)
T PRK04043        397 IRLNY  401 (419)
T ss_pred             EecCC
Confidence            66533

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=99.26  E-value=4.2e-10  Score=92.78  Aligned_cols=240  Identities=13%  Similarity=0.217  Sum_probs=162.3

Q ss_pred             CCCcEEEEEEecCCCEEEEEecCceEEEEECCCCce----eEEeeccCc------------cCeEEEEeCCCC--cEEEE
Q psy17610         80 DDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFT----LTLVNTCHT------------SAIYDLQFPVNF--SSVFA  141 (515)
Q Consensus        80 ~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~----~~~~~~~h~------------~~v~~~~~~~~~--~~l~~  141 (515)
                      ....|+++.|...|.||++|...|.|.+|.-+....    ....+++|.            ..|..+.|..++  ..++.
T Consensus        25 ead~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLl  104 (460)
T COG5170          25 EADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLL  104 (460)
T ss_pred             ccceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEE
Confidence            457899999999999999999999999998765321    111234453            357888886554  46777


Q ss_pred             EecCCcEEEEeCCCCc-------------------ee-----------------------EEE-EecCeEEEEEEEeeCC
Q psy17610        142 TCSKNDIRIWSVRTLN-------------------EL-----------------------LRI-SVMNMICACIVFTYDG  178 (515)
Q Consensus       142 ~~~d~~i~iw~~~~~~-------------------~~-----------------------~~~-~~~~~~v~~~~~~~~~  178 (515)
                      ++.|++|++|.+....                   ++                       +.+ ..|.-.+.++.|..|.
T Consensus       105 stNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD~  184 (460)
T COG5170         105 STNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSDK  184 (460)
T ss_pred             ecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCch
Confidence            8889999999875420                   00                       001 2355667889999888


Q ss_pred             CEEEEEeCCCeEEEEecCCCce---EEEecCCCC-----CCeEEEEEcCC-CCEEEEecCCCcEEEEEccCCce-----e
Q psy17610        179 KAILSGWNDGFIRCFTPQSGKL---KFIIPNAHN-----RGVTALAITQD-GTRLLSGGGEGQVRIWKLTRESQ-----S  244 (515)
Q Consensus       179 ~~l~~~~~dg~i~~~~~~~~~~---~~~~~~~~~-----~~v~~~~~~~~-~~~l~~~~~d~~i~iw~~~~~~~-----~  244 (515)
                      +.++++ .|-.|.+|+++--..   +..+ .+|.     .-|++..|+|. ...+...+..|.|++-|+++...     .
T Consensus       185 et~lSa-DdLrINLWnl~i~D~sFnIVDi-KP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~~k  262 (460)
T COG5170         185 ETLLSA-DDLRINLWNLEIIDGSFNIVDI-KPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNSKK  262 (460)
T ss_pred             heeeec-cceeeeeccccccCCceEEEec-cCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccCchh
Confidence            877776 566799999874322   2222 3443     45888999994 45666677789999999973211     0


Q ss_pred             ---------eEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccce-EEEEEEcCc----------------cEE
Q psy17610        245 ---------LQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKST-RLIIMILPS----------------MIM  298 (515)
Q Consensus       245 ---------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-~~~~~~~~~----------------~~~  298 (515)
                               -..-+.+-...|..+.|+++|+++++-+. -++++||.+..+ ++.++..+.                .-.
T Consensus       263 lfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdy-ltvkiwDvnm~k~pikTi~~h~~l~~~l~d~YEnDaifdkF  341 (460)
T COG5170         263 LFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDY-LTVKIWDVNMAKNPIKTIPMHCDLMDELNDVYENDAIFDKF  341 (460)
T ss_pred             hhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEecc-ceEEEEecccccCCceeechHHHHHHHHHhhhhccceeeeE
Confidence                     01112234567889999999999888765 489999997643 444443221                124


Q ss_pred             EEEEcCCCcEEEEEECCCeEEEEe
Q psy17610        299 SAAYHPSEVQLITCSTNKMIDYWE  322 (515)
Q Consensus       299 ~~~~~~~~~~l~~~~~~~~i~~~d  322 (515)
                      .+.|+.+.+.+++|+.....-+|-
T Consensus       342 eisfSgd~~~v~sgsy~NNfgiyp  365 (460)
T COG5170         342 EISFSGDDKHVLSGSYSNNFGIYP  365 (460)
T ss_pred             EEEecCCcccccccccccceeeec
Confidence            567788888888888776666654

>KOG4532|consensus

Probab=99.25  E-value=6.2e-09  Score=84.19  Aligned_cols=258  Identities=11%  Similarity=0.033  Sum_probs=166.6

Q ss_pred             cCceEEEEECCCC-ceeEEeeccCccCeEEEEeCC-----CCcEEEEEecCCcEEEEeCCCCce-eEEEEecCeEEEEEE
Q psy17610        101 VNCEIFLIDMNSG-FTLTLVNTCHTSAIYDLQFPV-----NFSSVFATCSKNDIRIWSVRTLNE-LLRISVMNMICACIV  173 (515)
Q Consensus       101 ~d~~i~iw~~~~~-~~~~~~~~~h~~~v~~~~~~~-----~~~~l~~~~~d~~i~iw~~~~~~~-~~~~~~~~~~v~~~~  173 (515)
                      ....+.+|+..+. +.+..+.       +.+.|-|     ...+|+.++..|...+|...+.+. ++....+...|+-+.
T Consensus        50 ~t~sv~i~~~y~N~~~iv~~y-------~g~~F~p~s~~~kc~~la~gG~~g~fd~~~~~tn~~h~~~cd~snn~v~~~~  122 (344)
T KOG4532|consen   50 KTISVPINSHYSNPKGIVEFY-------TGMTFTPGSFINKCVTLADGGASGQFDLFACNTNDGHLYQCDVSNNDVTLVK  122 (344)
T ss_pred             ceeeeEeccccCCchhhEEee-------ecccccchHhhccccEEEeccccceeeeecccCcccceeeecccccchhhhh
Confidence            4456888887653 2234343       2344443     335888888999999999986553 333334443332111


Q ss_pred             E-eeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEE-eecc
Q psy17610        174 F-TYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQC-VLKE  251 (515)
Q Consensus       174 ~-~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~-~~~~  251 (515)
                      = .-..-.+..++.|.++++.+++.+........+ .-.+.+++++++++++++.+....|..|.++........ ....
T Consensus       123 r~cd~~~~~~i~sndht~k~~~~~~~s~~~~~h~~-~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~  201 (344)
T KOG4532|consen  123 RYCDLKFPLNIASNDHTGKTMVVSGDSNKFAVHNQ-NLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAP  201 (344)
T ss_pred             hhcccccceeeccCCcceeEEEEecCcccceeecc-ccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecc
Confidence            1 111224667788888888888765544433111 133789999999999999999999999999866655554 2333


Q ss_pred             ccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEE------EcCccEEEEEEcCCCc--EEEEEECCCeEEEEeC
Q psy17610        252 HTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIM------ILPSMIMSAAYHPSEV--QLITCSTNKMIDYWET  323 (515)
Q Consensus       252 ~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~------~~~~~~~~~~~~~~~~--~l~~~~~~~~i~~~d~  323 (515)
                      .++.-.+..|+.....++++..||++.+||++........      .+.+.+..+.|++.|.  +|+..-.-+.+.+.|+
T Consensus       202 t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~  281 (344)
T KOG4532|consen  202 TSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDT  281 (344)
T ss_pred             cCCCceeeeeccCcceEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEc
Confidence            3445567889999999999999999999999876433222      2345789999998653  4555556678999999


Q ss_pred             CCCceEEEEecCC-------CccEEEEEEcCCCCEEEEEcCCCeEEEEEcc
Q psy17610        324 CDGSIIRSLEGSD-------VAAVNCVDFVDDGKYFLTGGADQIVKMWMYR  367 (515)
Q Consensus       324 ~~~~~~~~~~~~~-------~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~  367 (515)
                      +++...+.+....       ...+..-.|+.++.-+.+.+++ .+.=|++.
T Consensus       282 R~~~~~q~I~i~~d~~~~~~tq~ifgt~f~~~n~s~~v~~e~-~~ae~ni~  331 (344)
T KOG4532|consen  282 RNYVNHQVIVIPDDVERKHNTQHIFGTNFNNENESNDVKNEL-QGAEYNIL  331 (344)
T ss_pred             ccCceeeEEecCccccccccccccccccccCCCcccccccch-hhheeecc
Confidence            9987666554332       1235555566655555554443 23344443

>KOG4532|consensus

Probab=99.23  E-value=4.7e-09  Score=84.87  Aligned_cols=209  Identities=7%  Similarity=0.010  Sum_probs=145.6

Q ss_pred             EEEEec-----CCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEe-CCCCcEEEEEecCCcEEEEeCCCCcee
Q psy17610         86 SLQYNP-----VNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQF-PVNFSSVFATCSKNDIRIWSVRTLNEL  159 (515)
Q Consensus        86 ~~~~s~-----~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~~l~~~~~d~~i~iw~~~~~~~~  159 (515)
                      .|.|-|     .-.+||.|+..|...+|...+.+.....-..|...|+-+.= .-....+..++.|.++++.+++-+...
T Consensus        72 g~~F~p~s~~~kc~~la~gG~~g~fd~~~~~tn~~h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~~  151 (344)
T KOG4532|consen   72 GMTFTPGSFINKCVTLADGGASGQFDLFACNTNDGHLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSNK  151 (344)
T ss_pred             cccccchHhhccccEEEeccccceeeeecccCcccceeeecccccchhhhhhhcccccceeeccCCcceeEEEEecCccc
Confidence            455555     34589999999999999998754444443334443332221 112235777788999999988765544


Q ss_pred             EEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCc--eEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEE
Q psy17610        160 LRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGK--LKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWK  237 (515)
Q Consensus       160 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~  237 (515)
                      .......-.+.++++++|++++++.+....|..|.+....  ............=.+..|+.....+|++..||++.|||
T Consensus       152 ~~~h~~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~D  231 (344)
T KOG4532|consen  152 FAVHNQNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYD  231 (344)
T ss_pred             ceeeccccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEE
Confidence            4443333347889999999999999999999999886543  23323344455567889999999999999999999999


Q ss_pred             ccCCceee---EEeeccccCceEEEEEecCCC--EEEEEeCCCcEEEEEcccceEEEEEEcC
Q psy17610        238 LTRESQSL---QCVLKEHTSSVSVIQIKSDSK--EAMSASTDGTCVLWDLIKSTRLIIMILP  294 (515)
Q Consensus       238 ~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~i~iwd~~~~~~~~~~~~~  294 (515)
                      ++......   ...-+.|.+.+..+.|++-|.  +|+..-.-+.+.+.|+++....+.+..+
T Consensus       232 VR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I~i~  293 (344)
T KOG4532|consen  232 VRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQVIVIP  293 (344)
T ss_pred             ecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceeeEEecC
Confidence            97433221   223356899999999998553  3455555578999999998877766544

>KOG0882|consensus

Probab=99.23  E-value=7.5e-10  Score=95.97  Aligned_cols=314  Identities=12%  Similarity=0.109  Sum_probs=204.3

Q ss_pred             cCCCcEEEEEEecCCCEEEEEecCceEEEEECCC--CceeEEeeccCccCeEEEEeCCCCcEEEEEec-CCcEEEEeCCC
Q psy17610         79 KDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNS--GFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS-KNDIRIWSVRT  155 (515)
Q Consensus        79 ~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~--~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~  155 (515)
                      -|.+.|+.+.-+ .-+++.+++.||.++.|.-..  |......+..|-+.|.+++.+-++..+.+.+. |..++++|+++
T Consensus         7 mhrd~i~hv~~t-ka~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn   85 (558)
T KOG0882|consen    7 MHRDVITHVFPT-KAKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVEN   85 (558)
T ss_pred             cccceeeeEeee-hhheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeec
Confidence            477888887665 567899999999999998654  44445556678999999999999977777777 99999999987


Q ss_pred             CceeEEEEecCeEEEEEEEeeCCC---EEE-EEeCCCeEEEEecCCCc-eEEEecCCCCCCeEEEEEcCCCCEEEEecCC
Q psy17610        156 LNELLRISVMNMICACIVFTYDGK---AIL-SGWNDGFIRCFTPQSGK-LKFIIPNAHNRGVTALAITQDGTRLLSGGGE  230 (515)
Q Consensus       156 ~~~~~~~~~~~~~v~~~~~~~~~~---~l~-~~~~dg~i~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  230 (515)
                      -..+..++...-+=.+-.+...|.   .++ +...++.+.++|-.... ....+..-|..+|..+.+++-+..+++....
T Consensus        86 ~DminmiKL~~lPg~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~  165 (558)
T KOG0882|consen   86 FDMINMIKLVDLPGFAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDIS  165 (558)
T ss_pred             cchhhhcccccCCCceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceeecccc
Confidence            665533332111111111222231   333 33457899999977654 3444446799999999999999999999999


Q ss_pred             CcEEEEEccCC----cee---------eEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccE
Q psy17610        231 GQVRIWKLTRE----SQS---------LQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMI  297 (515)
Q Consensus       231 ~~i~iw~~~~~----~~~---------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~  297 (515)
                      |.|.-|.....    ...         ....+........++.|+|++..+.+-+.|..|+++++.+++..+.+......
T Consensus       166 gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqeiDE~~t~  245 (558)
T KOG0882|consen  166 GMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEIDEVLTD  245 (558)
T ss_pred             ceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCcccEEEEEEeccchhhhhhhccchh
Confidence            99999998631    110         11112234456789999999999999999999999999999877765432110


Q ss_pred             EEEEEcCCCcEEEEEECCCeEEEEeCCCCc---eEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeee
Q psy17610        298 MSAAYHPSEVQLITCSTNKMIDYWETCDGS---IIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFV  374 (515)
Q Consensus       298 ~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~  374 (515)
                        ..+-|...          +.+-.+.-++   ..+.++.+....-..+.|...|++|+-|+-=| |++.++.+++..+.
T Consensus       246 --~~~q~ks~----------y~l~~VelgRRmaverelek~~~~~~~~~~fdes~~flly~t~~g-ikvin~~tn~v~ri  312 (558)
T KOG0882|consen  246 --AQYQPKSP----------YGLMHVELGRRMAVERELEKHGSTVGTNAVFDESGNFLLYGTILG-IKVINLDTNTVVRI  312 (558)
T ss_pred             --hhhccccc----------cccceeehhhhhhHHhhHhhhcCcccceeEEcCCCCEEEeeccee-EEEEEeecCeEEEE
Confidence              00111110          1111111111   11222233334455678999999999887654 88888888776655


Q ss_pred             ccC------------------CCCCe-------eEEEECCCCcEEEEEeCCCcEEEE
Q psy17610        375 GIG------------------HAASI-------TKIKISPDKKVIVSVSADGGIFLW  406 (515)
Q Consensus       375 ~~~------------------~~~~i-------~~~~~~~~~~~l~~~~~dg~i~iw  406 (515)
                      +-.                  +...+       ..+.+.+|...++++-...+++++
T Consensus       313 ~gk~e~ir~~~~sl~q~~~k~~~~~~~~~a~~np~~~~~~dpt~~c~a~kk~rfylf  369 (558)
T KOG0882|consen  313 LGKDEAIRFTRLSLYQGAQKSNLAALEVAASNNPLLEFQKDPTIVCTAFKKNRFYLF  369 (558)
T ss_pred             eccchhhhhhhHHHHhhhhhccchhhhhhhccCcccccCCCCeEEEeeeecceEEEE
Confidence            421                  10000       112355666677777777778887

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=99.22  E-value=7.1e-08  Score=82.12  Aligned_cols=231  Identities=16%  Similarity=0.157  Sum_probs=156.0

Q ss_pred             eEEEEEec-CCCEEEEEeCCCc-EEEEEcccceEEEEEEcCcc---EEEEEEcCCCcEEEEEEC-----CCeEEEEeCC-
Q psy17610        256 VSVIQIKS-DSKEAMSASTDGT-CVLWDLIKSTRLIIMILPSM---IMSAAYHPSEVQLITCST-----NKMIDYWETC-  324 (515)
Q Consensus       256 v~~~~~~~-~~~~l~~~~~d~~-i~iwd~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~-----~~~i~~~d~~-  324 (515)
                      ...++.+| ....++.+-.-|+ ..+||..+++....+..+..   .-..+|++||++|++.-.     .|.|-+||.. 
T Consensus         7 gH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~   86 (305)
T PF07433_consen    7 GHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAAR   86 (305)
T ss_pred             ccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcC
Confidence            34567778 4455556665554 77899999998887765543   346789999999998644     5789999998 


Q ss_pred             CCceEEEEecCCCccEEEEEEcCCCCEEEEEcC------------------CCeEEEEEccCCeeeee--c--cCCCCCe
Q psy17610        325 DGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA------------------DQIVKMWMYREGVPCFV--G--IGHAASI  382 (515)
Q Consensus       325 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~------------------dg~i~i~d~~~~~~~~~--~--~~~~~~i  382 (515)
                      +.+.+.++..+. -....+.+.|||+.|+++.-                  +-.+...|..+|+.+..  +  ..|..+|
T Consensus        87 ~~~ri~E~~s~G-IGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSi  165 (305)
T PF07433_consen   87 GYRRIGEFPSHG-IGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSI  165 (305)
T ss_pred             CcEEEeEecCCC-cChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCccccccce
Confidence            667777787665 44567889999988877632                  23455567778887766  4  3478899


Q ss_pred             eEEEECCCCcEEEEEeCCCc-------EEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcE
Q psy17610        383 TKIKISPDKKVIVSVSADGG-------IFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQ  455 (515)
Q Consensus       383 ~~~~~~~~~~~l~~~~~dg~-------i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~  455 (515)
                      ..+++.++|..++..-..|.       +-+++........               .............+-++++++++.+
T Consensus       166 RHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g~~~~~~---------------~~p~~~~~~l~~Y~gSIa~~~~g~~  230 (305)
T PF07433_consen  166 RHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRGGALRLL---------------PAPEEQWRRLNGYIGSIAADRDGRL  230 (305)
T ss_pred             eeEEecCCCcEEEEEecCCCCCccCCeEEEEcCCCcceec---------------cCChHHHHhhCCceEEEEEeCCCCE
Confidence            99999999887666544432       2222221110000               0000011223467999999999988


Q ss_pred             EEEee-cCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCC
Q psy17610        456 LITCS-TNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQ  506 (515)
Q Consensus       456 l~~~~-~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg  506 (515)
                      +++.+ ..+.+.+||..+++.+....-.   .+..++-.+++ +++|.+.-.
T Consensus       231 ia~tsPrGg~~~~~d~~tg~~~~~~~l~---D~cGva~~~~~-f~~ssG~G~  278 (305)
T PF07433_consen  231 IAVTSPRGGRVAVWDAATGRLLGSVPLP---DACGVAPTDDG-FLVSSGQGQ  278 (305)
T ss_pred             EEEECCCCCEEEEEECCCCCEeeccccC---ceeeeeecCCc-eEEeCCCcc
Confidence            76555 5678999999999998877654   45667777666 666665443

>KOG4649|consensus

Probab=99.20  E-value=5.2e-07  Score=73.14  Aligned_cols=301  Identities=15%  Similarity=0.130  Sum_probs=169.0

Q ss_pred             CCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEE
Q psy17610         93 NNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACI  172 (515)
Q Consensus        93 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~  172 (515)
                      ..+++.|+..+.+.-.|.++|...-...-  ...|.+-+.- -|.+++.++..+.+.+.+.++|++...+.....-=...
T Consensus        23 kT~v~igSHs~~~~avd~~sG~~~We~il--g~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~a   99 (354)
T KOG4649|consen   23 KTLVVIGSHSGIVIAVDPQSGNLIWEAIL--GVRIECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVRA   99 (354)
T ss_pred             ceEEEEecCCceEEEecCCCCcEEeehhh--CceeeeeeEE-ECCEEEEEEccCcEEEEEecchhheeeeeehhhhccce
Confidence            46778888889999999998755444322  2333333322 35689999999999999999998888877544322334


Q ss_pred             EEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcC-CCCEEEEecCCCcEEEEEccCCceeeEEeecc
Q psy17610        173 VFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQ-DGTRLLSGGGEGQVRIWKLTRESQSLQCVLKE  251 (515)
Q Consensus       173 ~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~  251 (515)
                      ...+++..+..++.|+..+..|..+...+.+.. .......+-+..| ++. |..+...|.+.--..+......... ..
T Consensus       100 ~~d~~~glIycgshd~~~yalD~~~~~cVyksk-cgG~~f~sP~i~~g~~s-ly~a~t~G~vlavt~~~~~~~~~w~-~~  176 (354)
T KOG4649|consen  100 QCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSK-CGGGTFVSPVIAPGDGS-LYAAITAGAVLAVTKNPYSSTEFWA-AT  176 (354)
T ss_pred             EEcCCCceEEEecCCCcEEEecccccceEEecc-cCCceeccceecCCCce-EEEEeccceEEEEccCCCCcceehh-hh
Confidence            567889999999999999999999988887752 3333333445566 443 4444444555444432211111100 00


Q ss_pred             ccCceEE--EEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEE-EEE-cCCCcEEEEEECCCe--------EE
Q psy17610        252 HTSSVSV--IQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMS-AAY-HPSEVQLITCSTNKM--------ID  319 (515)
Q Consensus       252 ~~~~v~~--~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~-~~~~~~l~~~~~~~~--------i~  319 (515)
                      ..+++.+  ++   -+..+..+.-||.+.-++ ..++.+......+++.. -+- .|..+.+..+..+-.        -.
T Consensus       177 ~~~PiF~splc---v~~sv~i~~VdG~l~~f~-~sG~qvwr~~t~GpIf~~Pc~s~Ps~q~i~~~~~~Cf~~~~p~~ghL  252 (354)
T KOG4649|consen  177 RFGPIFASPLC---VGSSVIITTVDGVLTSFD-ESGRQVWRPATKGPIFMEPCESRPSCQQISLENENCFCAPLPIAGHL  252 (354)
T ss_pred             cCCccccCcee---ccceEEEEEeccEEEEEc-CCCcEEEeecCCCceecccccCCCcceEEEEecCCeEEEeccccceE
Confidence            1122211  11   123344555566666666 45555554444444321 111 144344444433322        23


Q ss_pred             EEeCCCCceEEEEecCCCccEEEEEEcC----CCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEE--------E
Q psy17610        320 YWETCDGSIIRSLEGSDVAAVNCVDFVD----DGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIK--------I  387 (515)
Q Consensus       320 ~~d~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~--------~  387 (515)
                      +|..+++...+....+.    ...+++.    ..+++..++.||.+.|.-.+  +.+.....|.+.+..+.        |
T Consensus       253 ~w~~~~g~t~~vy~~p~----l~F~~h~~~~S~~~ll~~~s~dgkv~il~~~--~sl~~~~s~~g~lq~~~~~el~~eIF  326 (354)
T KOG4649|consen  253 LWATQSGTTLHVYLSPK----LRFDLHSPGISYPKLLRRSSGDGKVMILMTS--KSLAEISSNGGELQNLEAIELSNEIF  326 (354)
T ss_pred             EEEecCCcEEEEEeCcc----cceeccCCCCcchhhhhhhcCCCcEEEEEec--ccccccccCCCccceEEEeecCcccc
Confidence            56655654443333221    0122221    24567778889988877443  22444444444433332        2


Q ss_pred             -CC---CCcEEEEEeCCCcEEEEeCCC
Q psy17610        388 -SP---DKKVIVSVSADGGIFLWTFPE  410 (515)
Q Consensus       388 -~~---~~~~l~~~~~dg~i~iw~~~~  410 (515)
                       ||   +| +|+.|+.|..++.||+..
T Consensus       327 sSPvii~g-rl~igcRDdYv~cldl~~  352 (354)
T KOG4649|consen  327 SSPVIIDG-RLLIGCRDDYVRCLDLDT  352 (354)
T ss_pred             cCCeEEcc-EEEEEEccCeEEEEeccc
Confidence             23   44 477788999999999865

>KOG0882|consensus

Probab=99.20  E-value=8.2e-10  Score=95.70  Aligned_cols=271  Identities=13%  Similarity=0.107  Sum_probs=185.8

Q ss_pred             CCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccC-CceeeEEeeccccCceEEEEEecCCCEEEEEeC-CCcEEEEEccc
Q psy17610        207 AHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTR-ESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST-DGTCVLWDLIK  284 (515)
Q Consensus       207 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iwd~~~  284 (515)
                      -|...|+.+..+ ..+++++++.||.++.|.-.. .....+..+..|...|.+++.+.++.++.+.+. |..++++|+++
T Consensus         7 mhrd~i~hv~~t-ka~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn   85 (558)
T KOG0882|consen    7 MHRDVITHVFPT-KAKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVEN   85 (558)
T ss_pred             cccceeeeEeee-hhheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeec
Confidence            477777766554 456899999999999998754 344566667889999999999999999999887 99999999988


Q ss_pred             ceEEEEEEcCccEEEEEEcC-CC--c-EEE-EEECCCeEEEEeCCCCc-eEEEEecCCCccEEEEEEcCCCCEEEEEcCC
Q psy17610        285 STRLIIMILPSMIMSAAYHP-SE--V-QLI-TCSTNKMIDYWETCDGS-IIRSLEGSDVAAVNCVDFVDDGKYFLTGGAD  358 (515)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~-~~--~-~l~-~~~~~~~i~~~d~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d  358 (515)
                      ......+........+.|.. .|  . .++ ....++.+.++|-.... +..-+..-+..+|.++.+.|-+..+++....
T Consensus        86 ~DminmiKL~~lPg~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~  165 (558)
T KOG0882|consen   86 FDMINMIKLVDLPGFAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDIS  165 (558)
T ss_pred             cchhhhcccccCCCceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceeecccc
Confidence            76665554444333333322 22  1 233 33457899999977654 4455555566999999999999999999999


Q ss_pred             CeEEEEEccC------Ceee---------eeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccce
Q psy17610        359 QIVKMWMYRE------GVPC---------FVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSS  423 (515)
Q Consensus       359 g~i~i~d~~~------~~~~---------~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~  423 (515)
                      |.|.-|..+.      .+..         ..+.......+++.|+|++..+.+-+.|..|+++.+.++............
T Consensus       166 gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqeiDE~~t~  245 (558)
T KOG0882|consen  166 GMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEIDEVLTD  245 (558)
T ss_pred             ceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCcccEEEEEEeccchhhhhhhccchh
Confidence            9999998763      1111         112234456789999999999999999999999998876532211111000


Q ss_pred             e--eeccccc----------c-cceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeee
Q psy17610        424 K--ISRSTAR----------S-TRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSL  479 (515)
Q Consensus       424 ~--~~~~~~~----------~-~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~  479 (515)
                      .  .......          . .+.........-+.+.|...|++|+.++--| |++.++.++++.+.+
T Consensus       246 ~~~q~ks~y~l~~VelgRRmaverelek~~~~~~~~~~fdes~~flly~t~~g-ikvin~~tn~v~ri~  313 (558)
T KOG0882|consen  246 AQYQPKSPYGLMHVELGRRMAVERELEKHGSTVGTNAVFDESGNFLLYGTILG-IKVINLDTNTVVRIL  313 (558)
T ss_pred             hhhccccccccceeehhhhhhHHhhHhhhcCcccceeEEcCCCCEEEeeccee-EEEEEeecCeEEEEe
Confidence            0  0000000          0 0000011122356788999999999998777 899999988877665

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=99.20  E-value=1.2e-07  Score=78.28  Aligned_cols=226  Identities=19%  Similarity=0.253  Sum_probs=133.2

Q ss_pred             EEEeeCCCEEEEEeCCCeEEEEecCCC--c--eEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEE
Q psy17610        172 IVFTYDGKAILSGWNDGFIRCFTPQSG--K--LKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQC  247 (515)
Q Consensus       172 ~~~~~~~~~l~~~~~dg~i~~~~~~~~--~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~  247 (515)
                      ++.+++|+.||+. .|..|.+-..+..  .  ....+++.....=..++|+||+..||.+...|+|++||+....   ..
T Consensus         3 ~~~~~~Gk~lAi~-qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~---lf   78 (282)
T PF15492_consen    3 LALSSDGKLLAIL-QDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMGSE---LF   78 (282)
T ss_pred             eeecCCCcEEEEE-eccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEecccce---eE
Confidence            4567788876665 5666776654432  1  1223333444456789999999999999999999999985321   11


Q ss_pred             eec-------cccCceEEEEEecC------CCEEEEEeCCCcEEEEEccc-----ceEEEEEE----cCccEEEEEEcCC
Q psy17610        248 VLK-------EHTSSVSVIQIKSD------SKEAMSASTDGTCVLWDLIK-----STRLIIMI----LPSMIMSAAYHPS  305 (515)
Q Consensus       248 ~~~-------~~~~~v~~~~~~~~------~~~l~~~~~d~~i~iwd~~~-----~~~~~~~~----~~~~~~~~~~~~~  305 (515)
                      .++       .-...|..+.|.+.      ...|++...+|.++-|-+..     .+....+.    .+..+.++.++|.
T Consensus        79 ~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~  158 (282)
T PF15492_consen   79 VIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPK  158 (282)
T ss_pred             EcCcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCC
Confidence            111       12345666766442      22467777788887776532     23333333    3457999999999


Q ss_pred             CcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEE--EEEcCCC------eEEEEEccCCeeeeeccC
Q psy17610        306 EVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYF--LTGGADQ------IVKMWMYREGVPCFVGIG  377 (515)
Q Consensus       306 ~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l--~~~~~dg------~i~i~d~~~~~~~~~~~~  377 (515)
                      .+.|++|+....      +++.     .......+++-..-.+..+.  ++...|+      +..+|.+-+.+.......
T Consensus       159 h~LLlVgG~~~~------~~~~-----s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~~~  227 (282)
T PF15492_consen  159 HRLLLVGGCEQN------QDGM-----SKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFKFFSRQGQ  227 (282)
T ss_pred             CCEEEEeccCCC------CCcc-----ccccccCceEEEEcCCCCcEEEccccCccccccccccceeeccceeeeecccc
Confidence            999888765422      0000     00000122221111111111  1122121      123344333333222234


Q ss_pred             CCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCc
Q psy17610        378 HAASITKIKISPDKKVIVSVSADGGIFLWTFPELE  412 (515)
Q Consensus       378 ~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  412 (515)
                      ....|..|..||||+.||+...+|.|.+|+++...
T Consensus       228 ~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~  262 (282)
T PF15492_consen  228 EQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLR  262 (282)
T ss_pred             CCCceEEEEECCCCCEEEEEEcCCeEEEEecCcch
Confidence            56789999999999999999999999999998765

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=99.19  E-value=4.1e-08  Score=80.88  Aligned_cols=234  Identities=12%  Similarity=0.118  Sum_probs=138.7

Q ss_pred             EEeCCCCcEEEEEecCCcEEEEeCCCC--ceeEEEEec---CeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEe
Q psy17610        130 LQFPVNFSSVFATCSKNDIRIWSVRTL--NELLRISVM---NMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFII  204 (515)
Q Consensus       130 ~~~~~~~~~l~~~~~d~~i~iw~~~~~--~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~  204 (515)
                      ++.+++|+ +++.-.|..|.|-..++.  ..+.+.+.+   ...-..++|+||+..||.+...|+|+++|+...+. ..+
T Consensus         3 ~~~~~~Gk-~lAi~qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~l-f~I   80 (282)
T PF15492_consen    3 LALSSDGK-LLAILQDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMGSEL-FVI   80 (282)
T ss_pred             eeecCCCc-EEEEEeccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEeccccee-EEc
Confidence            55677874 555566777877766542  122333322   23457899999999999999999999999876443 333


Q ss_pred             cCCC------CCCeEEEEEcCC------CCEEEEecCCCcEEEEEccC---CceeeEEe--ec-cccCceEEEEEecCCC
Q psy17610        205 PNAH------NRGVTALAITQD------GTRLLSGGGEGQVRIWKLTR---ESQSLQCV--LK-EHTSSVSVIQIKSDSK  266 (515)
Q Consensus       205 ~~~~------~~~v~~~~~~~~------~~~l~~~~~d~~i~iw~~~~---~~~~~~~~--~~-~~~~~v~~~~~~~~~~  266 (515)
                      +..+      ...|..+.|.+-      ...|++-..+|.++-|-+..   ........  +. .+...|.++.++|..+
T Consensus        81 ~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~  160 (282)
T PF15492_consen   81 PPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHR  160 (282)
T ss_pred             CcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCCC
Confidence            3222      345677777542      22566677788888887632   12222222  22 2467899999999988


Q ss_pred             EEEEEeCCCc-----------EEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecC
Q psy17610        267 EAMSASTDGT-----------CVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGS  335 (515)
Q Consensus       267 ~l~~~~~d~~-----------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~  335 (515)
                      +|+.|+....           +..|.+-++.+-..         .....+...-....   +..++.+.+.+... ....
T Consensus       161 LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk---------~v~~~~~~~~~~~~---~~~~~~~~~~~~fs-~~~~  227 (282)
T PF15492_consen  161 LLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYYK---------QVTSSEDDITASSK---RRGLLRIPSFKFFS-RQGQ  227 (282)
T ss_pred             EEEEeccCCCCCccccccccCceEEEEcCCCCcEE---------EccccCcccccccc---ccceeeccceeeee-cccc
Confidence            8887765321           33333322221111         00011111100110   11222222211111 1223


Q ss_pred             CCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCC
Q psy17610        336 DVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGH  378 (515)
Q Consensus       336 ~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~  378 (515)
                      ....|..|..||||+.||+...+|.|.+|++.+-++......+
T Consensus       228 ~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W~~~  270 (282)
T PF15492_consen  228 EQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSWKQD  270 (282)
T ss_pred             CCCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhcccchh
Confidence            3478999999999999999999999999999887766655433

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=99.18  E-value=4.7e-07  Score=78.15  Aligned_cols=266  Identities=13%  Similarity=0.137  Sum_probs=171.7

Q ss_pred             ceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec----------CCcEEEEeCCCCceeEEEEecCe-EE--
Q psy17610        103 CEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS----------KNDIRIWSVRTLNELLRISVMNM-IC--  169 (515)
Q Consensus       103 ~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~----------d~~i~iw~~~~~~~~~~~~~~~~-~v--  169 (515)
                      ++++++|.++++.+..+..+.   .-.+..+|+++.++++..          ...|.+||..+......+..+.. ..  
T Consensus        17 ~rv~viD~d~~k~lGmi~~g~---~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~   93 (342)
T PF06433_consen   17 SRVYVIDADSGKLLGMIDTGF---LGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQV   93 (342)
T ss_dssp             EEEEEEETTTTEEEEEEEEES---SEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--B
T ss_pred             ceEEEEECCCCcEEEEeeccc---CCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchhee
Confidence            489999999977666665444   344678999999988653          23499999999988887765543 21  


Q ss_pred             ----EEEEEeeCCCEEEEEeC--CCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCce
Q psy17610        170 ----ACIVFTYDGKAILSGWN--DGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQ  243 (515)
Q Consensus       170 ----~~~~~~~~~~~l~~~~~--dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~  243 (515)
                          ..++++.|++++++...  ...|.|.|+..++.+.++..  .+...  .+-...+.+.+-+.||.+.-..++....
T Consensus        94 ~~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~--PGC~~--iyP~~~~~F~~lC~DGsl~~v~Ld~~Gk  169 (342)
T PF06433_consen   94 VPYKNMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDT--PGCWL--IYPSGNRGFSMLCGDGSLLTVTLDADGK  169 (342)
T ss_dssp             S--GGGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEG--TSEEE--EEEEETTEEEEEETTSCEEEEEETSTSS
T ss_pred             cccccceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecC--CCEEE--EEecCCCceEEEecCCceEEEEECCCCC
Confidence                24678889998887543  45799999999998887742  22211  1211234578888999999999874332


Q ss_pred             eeEEe---eccccCce-EEEEEecCCCEEEEEeCCCcEEEEEcccceEEE--EEEc-----------CccEEEEEEcCCC
Q psy17610        244 SLQCV---LKEHTSSV-SVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLI--IMIL-----------PSMIMSAAYHPSE  306 (515)
Q Consensus       244 ~~~~~---~~~~~~~v-~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~--~~~~-----------~~~~~~~~~~~~~  306 (515)
                      .....   +.....++ ..-++...+..++..+.+|.|+--|+.......  ....           ++.-.-+++++..
T Consensus       170 ~~~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~  249 (342)
T PF06433_consen  170 EAQKSTKVFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHAAS  249 (342)
T ss_dssp             EEEEEEEESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEETTT
T ss_pred             EeEeeccccCCCCcccccccceECCCCeEEEEecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeecccc
Confidence            22211   11112222 233455566677778999999998887654322  2211           1223457787766


Q ss_pred             cEEEEEECC----------CeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCC-EEEE-EcCCCeEEEEEccCCeeeee
Q psy17610        307 VQLITCSTN----------KMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGK-YFLT-GGADQIVKMWMYREGVPCFV  374 (515)
Q Consensus       307 ~~l~~~~~~----------~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~-~~~dg~i~i~d~~~~~~~~~  374 (515)
                      ++|++....          ..|.++|+.+++.+.++...  .++.+++.+.+.+ +|++ ...++.+.+||..+|+.+..
T Consensus       250 ~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l~--~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~  327 (342)
T PF06433_consen  250 GRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPLE--HPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRS  327 (342)
T ss_dssp             TEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEEE--EEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEE
T ss_pred             CeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEEeCC--CccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEee
Confidence            655543221          24888899999999999876  5677999998766 4544 34678999999999998887


Q ss_pred             ccC
Q psy17610        375 GIG  377 (515)
Q Consensus       375 ~~~  377 (515)
                      ..+
T Consensus       328 ~~~  330 (342)
T PF06433_consen  328 IEQ  330 (342)
T ss_dssp             E--
T ss_pred             hhc
Confidence            754

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>PRK02888 nitrous-oxide reductase; Validated

Probab=99.17  E-value=2e-07  Score=87.13  Aligned_cols=345  Identities=14%  Similarity=0.068  Sum_probs=197.2

Q ss_pred             Cce--EEEecCCCCeEEEEcCCCCCCcccccccceEEeeccccccccccccccccccCcceeeeccceEEEEEecCCCcE
Q psy17610          7 DEF--AYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMGCYGKLIKKKVSTKLKDVNAEDVSLYSAGVTALYLLKDDSGI   84 (515)
Q Consensus         7 ~~~--~~~g~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v   84 (515)
                      |+|  +.+|.++|++.++-+-.++.++.+..=.+....+-    ......+++..-... ...|.-|-      .|.-.+
T Consensus        64 deyy~f~SgG~sG~~~v~G~PSmr~l~~ipvf~~~~~~G~----G~~~esk~~l~~~~~-~~~~~~gD------~HHp~~  132 (635)
T PRK02888         64 DEYYGFWSGGHSGEVRILGLPSMRELMRIPVFNRDSATGW----GITNESKKVLGEGAR-GGKYLNGD------THHPHM  132 (635)
T ss_pred             ccEEEEeeCCccceEEEEecCCcceEEEeeeecCCCCccc----CCchhHHHHhhcccc-CCcccCCC------cCCCcc
Confidence            454  66899999999999998877766553222111111    111111111100000 00010000      021111


Q ss_pred             EEEEEecCCCEEEEEec-CceEEEEECCCCceeEEeeccCccCeEEEEeC--CCCcEEEEEecCCcEEEEeCCCCceeEE
Q psy17610         85 SSLQYNPVNNKVFVGTV-NCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFP--VNFSSVFATCSKNDIRIWSVRTLNELLR  161 (515)
Q Consensus        85 ~~~~~s~~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~l~~~~~d~~i~iw~~~~~~~~~~  161 (515)
                      +--.=..||+||+.-.. +.+|-..+++.-+.-..+.......+..++|-  |+..++++.+..                
T Consensus       133 s~t~g~ydGr~~findk~n~Rvari~l~~~~~~~i~~iPn~~~~Hg~~~~~~p~t~yv~~~~e~----------------  196 (635)
T PRK02888        133 SFTDGTYDGRYLFINDKANTRVARIRLDVMKCDKITELPNVQGIHGLRPQKIPRTGYVFCNGEF----------------  196 (635)
T ss_pred             cccCCccceeEEEEecCCCcceEEEECccEeeceeEeCCCccCccccCccccCCccEEEeCccc----------------
Confidence            11111237888888764 56677777776333222333355566677774  666666665531                


Q ss_pred             EEecCeEEEEEEEeeCCCEEEE-EeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCC----cEEEE
Q psy17610        162 ISVMNMICACIVFTYDGKAILS-GWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEG----QVRIW  236 (515)
Q Consensus       162 ~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~----~i~iw  236 (515)
                               .+=+.|||+.+.. .-..+.+.+.|.++.+...++..  ......+.++|+|+++++.+.+.    .+..-
T Consensus       197 ---------~~PlpnDGk~l~~~~ey~~~vSvID~etmeV~~qV~V--dgnpd~v~~spdGk~afvTsyNsE~G~tl~em  265 (635)
T PRK02888        197 ---------RIPLPNDGKDLDDPKKYRSLFTAVDAETMEVAWQVMV--DGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEM  265 (635)
T ss_pred             ---------ccccCCCCCEeecccceeEEEEEEECccceEEEEEEe--CCCcccceECCCCCEEEEeccCcccCcceeee
Confidence                     1223445544432 22345677778888777766643  23456778999999998876321    22222


Q ss_pred             EccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEccc-----ceEEEEEEcCccEEEEEEcCCCcEEEE
Q psy17610        237 KLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIK-----STRLIIMILPSMIMSAAYHPSEVQLIT  311 (515)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~  311 (515)
                      +.  ........+.-.  .+  -++.++|++...  .++.|.+.|.++     .+....+..+.....+.++|||+++++
T Consensus       266 ~a--~e~d~~vvfni~--~i--ea~vkdGK~~~V--~gn~V~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyV  337 (635)
T PRK02888        266 MA--AERDWVVVFNIA--RI--EEAVKAGKFKTI--GGSKVPVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIA  337 (635)
T ss_pred             cc--ccCceEEEEchH--HH--HHhhhCCCEEEE--CCCEEEEEECCccccCCcceEEEEECCCCccceEECCCCCEEEE
Confidence            22  111111111100  00  123457776665  356899999998     567778888899999999999999887


Q ss_pred             EEC-CCeEEEEeCCCCce------------EEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccC----------
Q psy17610        312 CST-NKMIDYWETCDGSI------------IRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYRE----------  368 (515)
Q Consensus       312 ~~~-~~~i~~~d~~~~~~------------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~----------  368 (515)
                      ++. +.++.++|+.+.+.            ..+.+..  ......+|.++|+.+.+-.-|..|..|++..          
T Consensus       338 anklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevevG--lGPLHTaFDg~G~aytslf~dsqv~kwn~~~a~~~~~g~~~  415 (635)
T PRK02888        338 NGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPELG--LGPLHTAFDGRGNAYTTLFLDSQIVKWNIEAAIRAYKGEKV  415 (635)
T ss_pred             eCCCCCcEEEEEChhhhhhhhccCCccceEEEeeccC--CCcceEEECCCCCEEEeEeecceeEEEehHHHHHHhccccC
Confidence            765 88999999988653            3444432  3445678999999888888899999999876          


Q ss_pred             CeeeeeccCCCCC-----eeEEEECCCCcEEEEEeC
Q psy17610        369 GVPCFVGIGHAAS-----ITKIKISPDKKVIVSVSA  399 (515)
Q Consensus       369 ~~~~~~~~~~~~~-----i~~~~~~~~~~~l~~~~~  399 (515)
                      ...+..+.-|-.+     ...=.-.|||++|++...
T Consensus       416 ~~v~~k~dV~y~pgh~~~~~g~t~~~dgk~l~~~nk  451 (635)
T PRK02888        416 DPIVQKLDVHYQPGHNHASMGETKEADGKWLVSLNK  451 (635)
T ss_pred             CcceecccCCCccceeeecCCCcCCCCCCEEEEccc
Confidence            2223333222221     112223678898887754

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=99.16  E-value=2.2e-09  Score=88.61  Aligned_cols=253  Identities=13%  Similarity=0.216  Sum_probs=155.9

Q ss_pred             CCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCc---eeeEEeecccc------------CceEEEEEecCC--CEEEE
Q psy17610        208 HNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRES---QSLQCVLKEHT------------SSVSVIQIKSDS--KEAMS  270 (515)
Q Consensus       208 ~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~---~~~~~~~~~~~------------~~v~~~~~~~~~--~~l~~  270 (515)
                      ....|+++.|...|.++++|...|.|.+|.-....   .+....+++|.            ..|..+.|..++  ..++.
T Consensus        25 ead~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLl  104 (460)
T COG5170          25 EADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLL  104 (460)
T ss_pred             ccceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEE
Confidence            34568999999999999999999999999864322   22223344443            346677776554  45778


Q ss_pred             EeCCCcEEEEEcccceE--------------------------------------------EEEEEcCccEEEEEEcCCC
Q psy17610        271 ASTDGTCVLWDLIKSTR--------------------------------------------LIIMILPSMIMSAAYHPSE  306 (515)
Q Consensus       271 ~~~d~~i~iwd~~~~~~--------------------------------------------~~~~~~~~~~~~~~~~~~~  306 (515)
                      .+.|.+|++|.+.....                                            +..-.++..+.++.++.|.
T Consensus       105 stNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD~  184 (460)
T COG5170         105 STNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSDK  184 (460)
T ss_pred             ecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCch
Confidence            88899999998743200                                            0000122346778888887


Q ss_pred             cEEEEEECCCeEEEEeCCCCceEE---EEecCC----CccEEEEEEcCCC-CEEEEEcCCCeEEEEEccCCee------e
Q psy17610        307 VQLITCSTNKMIDYWETCDGSIIR---SLEGSD----VAAVNCVDFVDDG-KYFLTGGADQIVKMWMYREGVP------C  372 (515)
Q Consensus       307 ~~l~~~~~~~~i~~~d~~~~~~~~---~~~~~~----~~~i~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~------~  372 (515)
                      ..++++ .+-.|.+|++.-.....   .++.+.    ..-|++..|+|.. ..+.-.+..|.|++-|++....      +
T Consensus       185 et~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~~kl  263 (460)
T COG5170         185 ETLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNSKKL  263 (460)
T ss_pred             heeeec-cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccCchhh
Confidence            777665 56678899876543222   222222    1347788899843 4555667789999999974321      1


Q ss_pred             e----------eccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcc
Q psy17610        373 F----------VGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPS  442 (515)
Q Consensus       373 ~----------~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  442 (515)
                      .          -+.+-...|..+.|+++|+++++-+. -++++||+...........-......+       ........
T Consensus       264 fe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdy-ltvkiwDvnm~k~pikTi~~h~~l~~~-------l~d~YEnD  335 (460)
T COG5170         264 FELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDY-LTVKIWDVNMAKNPIKTIPMHCDLMDE-------LNDVYEND  335 (460)
T ss_pred             hhhccCcccchhHHHHhhhhcceEEcCCCcEEEEecc-ceEEEEecccccCCceeechHHHHHHH-------HHhhhhcc
Confidence            1          11233457889999999999987755 489999998765433222111100000       00000001


Q ss_pred             c---EEEeeeccCCcEEEEeecCCeEEEEe
Q psy17610        443 M---IMSAAYHPSEVQLITCSTNKMIDYWE  469 (515)
Q Consensus       443 ~---i~~~~~s~~~~~l~~~~~dg~v~iwd  469 (515)
                      .   -..+.||.|...+.+|+.....-+|-
T Consensus       336 aifdkFeisfSgd~~~v~sgsy~NNfgiyp  365 (460)
T COG5170         336 AIFDKFEISFSGDDKHVLSGSYSNNFGIYP  365 (460)
T ss_pred             ceeeeEEEEecCCcccccccccccceeeec
Confidence            1   23577888888888888776666665

>KOG3914|consensus

Probab=99.16  E-value=6.7e-10  Score=94.96  Aligned_cols=163  Identities=17%  Similarity=0.178  Sum_probs=114.3

Q ss_pred             eEEEEeCCCCcEEEEEecCCcEEEEeCCCCce----eEEEEecCeEEEEEEEeeCCCEEEEEeCCC---eEEEEecCCCc
Q psy17610        127 IYDLQFPVNFSSVFATCSKNDIRIWSVRTLNE----LLRISVMNMICACIVFTYDGKAILSGWNDG---FIRCFTPQSGK  199 (515)
Q Consensus       127 v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---~i~~~~~~~~~  199 (515)
                      ...+..+|.++.++.+..++...++++....+    +.... -....+++.|..+......+...|   .+.+|....+.
T Consensus        65 ~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~-v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~  143 (390)
T KOG3914|consen   65 PALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSC-VPKRPTAISFIREDTSVLVADKAGDVYSFDILSADSGR  143 (390)
T ss_pred             ccccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEee-cccCcceeeeeeccceEEEEeecCCceeeeeecccccC
Confidence            34455677777777777777766776654332    22222 222335566666666565554444   45566555555


Q ss_pred             eEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEE
Q psy17610        200 LKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVL  279 (515)
Q Consensus       200 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i  279 (515)
                      ....  .+|-..++.++|+||+++++++..|..|++-... .......-..||+.-|..++.-++ ..|++++.|+++++
T Consensus       144 ~~~~--lGhvSml~dVavS~D~~~IitaDRDEkIRvs~yp-a~f~IesfclGH~eFVS~isl~~~-~~LlS~sGD~tlr~  219 (390)
T KOG3914|consen  144 CEPI--LGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYP-ATFVIESFCLGHKEFVSTISLTDN-YLLLSGSGDKTLRL  219 (390)
T ss_pred             cchh--hhhhhhhheeeecCCCCEEEEecCCceEEEEecC-cccchhhhccccHhheeeeeeccC-ceeeecCCCCcEEE
Confidence            5544  4899999999999999999999999999998874 222223335689999999998765 56999999999999


Q ss_pred             EEcccceEEEEEEcC
Q psy17610        280 WDLIKSTRLIIMILP  294 (515)
Q Consensus       280 wd~~~~~~~~~~~~~  294 (515)
                      ||+.+++.+..+...
T Consensus       220 Wd~~sgk~L~t~dl~  234 (390)
T KOG3914|consen  220 WDITSGKLLDTCDLS  234 (390)
T ss_pred             EecccCCcccccchh
Confidence            999999988666544

>KOG0309|consensus

Probab=99.15  E-value=3.6e-10  Score=103.94  Aligned_cols=212  Identities=17%  Similarity=0.163  Sum_probs=154.2

Q ss_pred             eEEEEEecCCCcEEEEEEecC-CCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEE
Q psy17610         72 VTALYLLKDDSGISSLQYNPV-NNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRI  150 (515)
Q Consensus        72 ~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~i  150 (515)
                      ...+.+.+|...|+.+-|.|+ ...+|+++.|-.+..||+.+..........-...-..++|+-....+++.+..+.|++
T Consensus       105 aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlasshg~~i~v  184 (1081)
T KOG0309|consen  105 AIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSHGNDIFV  184 (1081)
T ss_pred             ceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhccCCceEE
Confidence            346678899999999999995 4678999999999999998865554444444456788999987788888888899999


Q ss_pred             EeCCCCc-eeEEEEecCeEEEEEEEeeC-CCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCC--EEEE
Q psy17610        151 WSVRTLN-ELLRISVMNMICACIVFTYD-GKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGT--RLLS  226 (515)
Q Consensus       151 w~~~~~~-~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~  226 (515)
                      ||++.|. ++..+++|...+..+.|..- ...+.+.+.|++|+.||.+..............+|..-.+.|-|.  .+.-
T Consensus       185 wd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~vtt~~piw~~r~~Pfg~g~~~mp  264 (1081)
T KOG0309|consen  185 WDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRTVTTNFPIWRGRYLPFGEGYCIMP  264 (1081)
T ss_pred             EeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeecccccccccceeccccCcceeccccccCceeEecc
Confidence            9998764 67788888888888888653 235788999999999998765443333234566777777777443  2221


Q ss_pred             ecCCCcEEEEEccC--------CceeeEEeeccccCceEEEEEecCC----------CEEEEEeCCCcEEEEEcc
Q psy17610        227 GGGEGQVRIWKLTR--------ESQSLQCVLKEHTSSVSVIQIKSDS----------KEAMSASTDGTCVLWDLI  283 (515)
Q Consensus       227 ~~~d~~i~iw~~~~--------~~~~~~~~~~~~~~~v~~~~~~~~~----------~~l~~~~~d~~i~iwd~~  283 (515)
                      .-.+..+.+++.+.        ....++..+.||.+.|....|-..+          -.|++-+.|.++++|-+.
T Consensus       265 ~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQLVTWSkD~~lrlWpI~  339 (1081)
T KOG0309|consen  265 MVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSRDFQLVTWSKDQTLRLWPID  339 (1081)
T ss_pred             ccCCeeeeeccccchhhhhccccCCcceeeecCcchHHHHHhhhhcccccCCCCccceeEEEeecCCceEeeecc
Confidence            11122444443321        1345788899999998777774432          258999999999999764

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=99.15  E-value=6.8e-08  Score=83.59  Aligned_cols=224  Identities=17%  Similarity=0.146  Sum_probs=141.7

Q ss_pred             CceEEEEECCCCceeEEeeccC-ccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCE
Q psy17610        102 NCEIFLIDMNSGFTLTLVNTCH-TSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKA  180 (515)
Q Consensus       102 d~~i~iw~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  180 (515)
                      +|.|..||..+|+.+-....+. .....+. ..+++..+++++.++.+..||..+|+.+.+...... +.... ..++..
T Consensus         2 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~-~~~~~-~~~~~~   78 (238)
T PF13360_consen    2 DGTLSALDPRTGKELWSYDLGPGIGGPVAT-AVPDGGRVYVASGDGNLYALDAKTGKVLWRFDLPGP-ISGAP-VVDGGR   78 (238)
T ss_dssp             TSEEEEEETTTTEEEEEEECSSSCSSEEET-EEEETTEEEEEETTSEEEEEETTTSEEEEEEECSSC-GGSGE-EEETTE
T ss_pred             CCEEEEEECCCCCEEEEEECCCCCCCccce-EEEeCCEEEEEcCCCEEEEEECCCCCEEEEeecccc-cccee-eecccc
Confidence            6889999999887776653211 1112211 233456888888999999999999999988875322 11111 334566


Q ss_pred             EEEEeCCCeEEEEecCCCceEEEecCCCC---CCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccC---
Q psy17610        181 ILSGWNDGFIRCFTPQSGKLKFIIPNAHN---RGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTS---  254 (515)
Q Consensus       181 l~~~~~dg~i~~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~---  254 (515)
                      +++++.++.+..+|..+|+..........   ...........+..++.+..++.|..+|+.++.............   
T Consensus        79 v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~  158 (238)
T PF13360_consen   79 VYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSSP  158 (238)
T ss_dssp             EEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS--
T ss_pred             cccccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCCcc
Confidence            77777888999999999999887412211   111222233337788888889999999986554433333321111   


Q ss_pred             -----ceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceE
Q psy17610        255 -----SVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSII  329 (515)
Q Consensus       255 -----~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~  329 (515)
                           .+..-....++ .++.++.++.+..+|+.+++.+.... ...... ...+++..+++++.++.+..||+++++.+
T Consensus       159 ~~~~~~~~~~~~~~~~-~v~~~~~~g~~~~~d~~tg~~~w~~~-~~~~~~-~~~~~~~~l~~~~~~~~l~~~d~~tG~~~  235 (238)
T PF13360_consen  159 ISSFSDINGSPVISDG-RVYVSSGDGRVVAVDLATGEKLWSKP-ISGIYS-LPSVDGGTLYVTSSDGRLYALDLKTGKVV  235 (238)
T ss_dssp             EEEETTEEEEEECCTT-EEEEECCTSSEEEEETTTTEEEEEEC-SS-ECE-CEECCCTEEEEEETTTEEEEEETTTTEEE
T ss_pred             eeeecccccceEEECC-EEEEEcCCCeEEEEECCCCCEEEEec-CCCccC-CceeeCCEEEEEeCCCEEEEEECCCCCEE
Confidence                 11122222234 77777777764444999999765333 333322 24567788888889999999999999876


Q ss_pred             EE
Q psy17610        330 RS  331 (515)
Q Consensus       330 ~~  331 (515)
                      .+
T Consensus       236 W~  237 (238)
T PF13360_consen  236 WQ  237 (238)
T ss_dssp             EE
T ss_pred             eE
Confidence            53

...

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=99.15  E-value=1.3e-07  Score=81.78  Aligned_cols=221  Identities=13%  Similarity=0.096  Sum_probs=141.7

Q ss_pred             CCcEEEEeCCCCceeEEEEecC--eEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCC
Q psy17610        145 KNDIRIWSVRTLNELLRISVMN--MICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGT  222 (515)
Q Consensus       145 d~~i~iw~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  222 (515)
                      +++|..||..+|+.+.+.....  ....+. ..+++..+++++.++.+..||..+|+.+......  ..+.... ...+.
T Consensus         2 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~--~~~~~~~-~~~~~   77 (238)
T PF13360_consen    2 DGTLSALDPRTGKELWSYDLGPGIGGPVAT-AVPDGGRVYVASGDGNLYALDAKTGKVLWRFDLP--GPISGAP-VVDGG   77 (238)
T ss_dssp             TSEEEEEETTTTEEEEEEECSSSCSSEEET-EEEETTEEEEEETTSEEEEEETTTSEEEEEEECS--SCGGSGE-EEETT
T ss_pred             CCEEEEEECCCCCEEEEEECCCCCCCccce-EEEeCCEEEEEcCCCEEEEEECCCCCEEEEeecc--cccccee-eeccc
Confidence            6789999999999999886421  111111 3346777888899999999999999988776432  2211111 22345


Q ss_pred             EEEEecCCCcEEEEEccCCceeeEEeecc-c-cCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccE---
Q psy17610        223 RLLSGGGEGQVRIWKLTRESQSLQCVLKE-H-TSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMI---  297 (515)
Q Consensus       223 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~-~-~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~---  297 (515)
                      .+++++.++.+..+|..++.......... . ...........++..++.+..++.+..+|+++++.+.......+.   
T Consensus        78 ~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~  157 (238)
T PF13360_consen   78 RVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSS  157 (238)
T ss_dssp             EEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS-
T ss_pred             ccccccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCCc
Confidence            66767788899999975544433311111 0 111222333334788889888999999999999998887664321   


Q ss_pred             --------EEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCC
Q psy17610        298 --------MSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREG  369 (515)
Q Consensus       298 --------~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~  369 (515)
                              ..-....++ .++.+..++.+.-+|+.+++.+.... .  .....+ ...++..+++++.++.+..||++++
T Consensus       158 ~~~~~~~~~~~~~~~~~-~v~~~~~~g~~~~~d~~tg~~~w~~~-~--~~~~~~-~~~~~~~l~~~~~~~~l~~~d~~tG  232 (238)
T PF13360_consen  158 PISSFSDINGSPVISDG-RVYVSSGDGRVVAVDLATGEKLWSKP-I--SGIYSL-PSVDGGTLYVTSSDGRLYALDLKTG  232 (238)
T ss_dssp             -EEEETTEEEEEECCTT-EEEEECCTSSEEEEETTTTEEEEEEC-S--S-ECEC-EECCCTEEEEEETTTEEEEEETTTT
T ss_pred             ceeeecccccceEEECC-EEEEEcCCCeEEEEECCCCCEEEEec-C--CCccCC-ceeeCCEEEEEeCCCEEEEEECCCC
Confidence                    122223344 77777777754444999999775333 2  223221 3456777888879999999999999


Q ss_pred             eeeee
Q psy17610        370 VPCFV  374 (515)
Q Consensus       370 ~~~~~  374 (515)
                      +....
T Consensus       233 ~~~W~  237 (238)
T PF13360_consen  233 KVVWQ  237 (238)
T ss_dssp             EEEEE
T ss_pred             CEEeE
Confidence            87643

...

>KOG4714|consensus

Probab=99.15  E-value=1.9e-09  Score=86.71  Aligned_cols=216  Identities=15%  Similarity=0.109  Sum_probs=123.0

Q ss_pred             cccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEE-E-cCccEEEEEEcCCCcEEEEEE-----CCCeEEEEeC
Q psy17610        251 EHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIM-I-LPSMIMSAAYHPSEVQLITCS-----TNKMIDYWET  323 (515)
Q Consensus       251 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-~-~~~~~~~~~~~~~~~~l~~~~-----~~~~i~~~d~  323 (515)
                      .|.++-.+-+.+--++.++++..||.+.+++.+.-...... . ......+.++...++.+.++.     .-+..+.|++
T Consensus        87 ~~sep~p~~~~s~~~t~V~~~~~dg~~~v~s~~~~~~~~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~  166 (319)
T KOG4714|consen   87 KNSEIDPNDACTMTDNRVCIGYADGSLAVFSTDKDLALMSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQDNFYANTL  166 (319)
T ss_pred             ccCCCCCcccccccCCceEecCCCceEEEEechHHHhhhhhcccccccccccceeecccEEecCCcceEeeccceeeecc
Confidence            44443333333344677999999999999987652111110 0 001111222223344333321     2234556666


Q ss_pred             CCCceEEEEecCCCccEEEEEEcCC-CCEEEEEcCCCeEEEEEccCCe-eeeeccCCCCCeeEEEECC-CCcEEEEEeCC
Q psy17610        324 CDGSIIRSLEGSDVAAVNCVDFVDD-GKYFLTGGADQIVKMWMYREGV-PCFVGIGHAASITKIKISP-DKKVIVSVSAD  400 (515)
Q Consensus       324 ~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d  400 (515)
                      +..+.+..-.... ..+.+++-+|. .+.+++|+.||.+.+||.++.. +...+..|+.+|..+.|+| ++..|++++.|
T Consensus       167 ~p~~t~~~~~~~~-~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sed  245 (319)
T KOG4714|consen  167 DPIKTLIPSKKAL-DAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSED  245 (319)
T ss_pred             ccccccccccccc-ccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCC
Confidence            5544333222222 44888888884 5677889999999999998864 3456789999999999999 67899999999


Q ss_pred             CcEEEEeCCCCcCccCCCcccce-eeeccccccccee---eecCcccEEEeeeccCCcEEEEeecCCeEEEEe
Q psy17610        401 GGIFLWTFPELEDDVGDSRSLSS-KISRSTARSTRLI---IMILPSMIMSAAYHPSEVQLITCSTNKMIDYWE  469 (515)
Q Consensus       401 g~i~iw~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd  469 (515)
                      |.+..||................ -......+....+   +......|+.  |.--|..|++|++-+.|++++
T Consensus       246 Gslw~wdas~~~l~i~~~~s~~s~WLsgD~v~s~i~i~~ll~~~~~Sins--fDV~g~~lVcgtd~eaIyl~~  316 (319)
T KOG4714|consen  246 GSLWHWDASTTFLSISNQASVISSWLSGDPVKSRIEITSLLPSRSLSINS--FDVLGPCLVCGTDAEAIYLTR  316 (319)
T ss_pred             CcEEEEcCCCceEEecCccccccccccCCcccceEeeeccccccceeeee--eeccCceEEeccccceEEEec
Confidence            99999998742211111110000 0000000000000   1111112333  344578899999889898875

>KOG4714|consensus

Probab=99.12  E-value=1.3e-09  Score=87.71  Aligned_cols=160  Identities=10%  Similarity=0.170  Sum_probs=106.8

Q ss_pred             cCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeecc-CccCeEEEEeCCCCcEEEEEe-----cCCcEEEEe
Q psy17610         79 KDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTC-HTSAIYDLQFPVNFSSVFATC-----SKNDIRIWS  152 (515)
Q Consensus        79 ~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~~~~-----~d~~i~iw~  152 (515)
                      .|.++=.+-+.+-.++.++++..||.+.+++.+.-..+...... |.+ -.+.+....+..+.+..     .-+..+.|+
T Consensus        87 ~~sep~p~~~~s~~~t~V~~~~~dg~~~v~s~~~~~~~~~~i~~~~~~-~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~  165 (319)
T KOG4714|consen   87 KNSEIDPNDACTMTDNRVCIGYADGSLAVFSTDKDLALMSRIPSIHSG-SASRKICRHGNSILSGGCGNWNAQDNFYANT  165 (319)
T ss_pred             ccCCCCCcccccccCCceEecCCCceEEEEechHHHhhhhhccccccc-ccccceeecccEEecCCcceEeeccceeeec
Confidence            45554445555556778999999999999998763222211111 111 11222223333433332     134566777


Q ss_pred             CCCCceeEEEEecCeEEEEEEEeeCCC-EEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcC-CCCEEEEecCC
Q psy17610        153 VRTLNELLRISVMNMICACIVFTYDGK-AILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQ-DGTRLLSGGGE  230 (515)
Q Consensus       153 ~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d  230 (515)
                      ++..+.+..-......|.+++-+|..+ .+++|+.||.+.+||.+.......+...|..++..+.|+| ++..|+++++|
T Consensus       166 ~~p~~t~~~~~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sed  245 (319)
T KOG4714|consen  166 LDPIKTLIPSKKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSED  245 (319)
T ss_pred             ccccccccccccccccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCC
Confidence            664443332222333488899888665 5667888999999999998776666689999999999999 77899999999


Q ss_pred             CcEEEEEcc
Q psy17610        231 GQVRIWKLT  239 (515)
Q Consensus       231 ~~i~iw~~~  239 (515)
                      |.+..||..
T Consensus       246 Gslw~wdas  254 (319)
T KOG4714|consen  246 GSLWHWDAS  254 (319)
T ss_pred             CcEEEEcCC
Confidence            999999974

>KOG4649|consensus

Probab=99.11  E-value=2.2e-06  Score=69.69  Aligned_cols=143  Identities=18%  Similarity=0.115  Sum_probs=96.7

Q ss_pred             CCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceE
Q psy17610        178 GKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVS  257 (515)
Q Consensus       178 ~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~  257 (515)
                      ..+++.|+..+.+...|..+|+...+..  -...|.+-+.- -|++++.|+..|.+++.+.+++..-......+  .-=.
T Consensus        23 kT~v~igSHs~~~~avd~~sG~~~We~i--lg~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~--~vk~   97 (354)
T KOG4649|consen   23 KTLVVIGSHSGIVIAVDPQSGNLIWEAI--LGVRIECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILE--TVKV   97 (354)
T ss_pred             ceEEEEecCCceEEEecCCCCcEEeehh--hCceeeeeeEE-ECCEEEEEEccCcEEEEEecchhheeeeeehh--hhcc
Confidence            3467788899999999999999877642  33344443333 46789999999999999986554333222221  1112


Q ss_pred             EEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccE-EEEEEcCCCcEEEEEECCCeEEEEeCCC
Q psy17610        258 VIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMI-MSAAYHPSEVQLITCSTNKMIDYWETCD  325 (515)
Q Consensus       258 ~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~i~~~d~~~  325 (515)
                      .....+++..+..++.|++.+..|.++..++.....++.+ .+-+..|-...|+++...|.+.--...+
T Consensus        98 ~a~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~~f~sP~i~~g~~sly~a~t~G~vlavt~~~  166 (354)
T KOG4649|consen   98 RAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGGTFVSPVIAPGDGSLYAAITAGAVLAVTKNP  166 (354)
T ss_pred             ceEEcCCCceEEEecCCCcEEEecccccceEEecccCCceeccceecCCCceEEEEeccceEEEEccCC
Confidence            2345678999999999999999999999988887666543 3455666445555555556554444433

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=99.11  E-value=5.8e-07  Score=76.70  Aligned_cols=224  Identities=18%  Similarity=0.194  Sum_probs=150.5

Q ss_pred             eEEEEeCCCCcEEEEEec-CC-cEEEEeCCCCceeEEEEecCeEE--EEEEEeeCCCEEEEEeC-----CCeEEEEecC-
Q psy17610        127 IYDLQFPVNFSSVFATCS-KN-DIRIWSVRTLNELLRISVMNMIC--ACIVFTYDGKAILSGWN-----DGFIRCFTPQ-  196 (515)
Q Consensus       127 v~~~~~~~~~~~l~~~~~-d~-~i~iw~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~~-----dg~i~~~~~~-  196 (515)
                      ...++.+|.....++.+. .| ...+||..+++....+....+.-  ---.|++||++|++.-.     .|.|-|||.. 
T Consensus         7 gH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~   86 (305)
T PF07433_consen    7 GHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAAR   86 (305)
T ss_pred             ccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcC
Confidence            456788895555555554 44 48899999999888776544332  24679999999998644     4889999999 


Q ss_pred             CCceEEEecCCCCCCeEEEEEcCCCCEEEEecC------------------CCcEEEEEccCCceeeEEee--ccccCce
Q psy17610        197 SGKLKFIIPNAHNRGVTALAITQDGTRLLSGGG------------------EGQVRIWKLTRESQSLQCVL--KEHTSSV  256 (515)
Q Consensus       197 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------------------d~~i~iw~~~~~~~~~~~~~--~~~~~~v  256 (515)
                      +-+.+.++ ..|.-....+.+.|||+.|+++..                  +..+...|..+........+  ..|...|
T Consensus        87 ~~~ri~E~-~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSi  165 (305)
T PF07433_consen   87 GYRRIGEF-PSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSI  165 (305)
T ss_pred             CcEEEeEe-cCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCccccccce
Confidence            55667777 466667788999999988887632                  12334444433332233335  3477889


Q ss_pred             EEEEEecCCCEEEEEeCCCc-------EEEEEcccceEEEEEEc--------CccEEEEEEcCCCcEEEEEEC-CCeEEE
Q psy17610        257 SVIQIKSDSKEAMSASTDGT-------CVLWDLIKSTRLIIMIL--------PSMIMSAAYHPSEVQLITCST-NKMIDY  320 (515)
Q Consensus       257 ~~~~~~~~~~~l~~~~~d~~-------i~iwd~~~~~~~~~~~~--------~~~~~~~~~~~~~~~l~~~~~-~~~i~~  320 (515)
                      .-+++.++|..++..-..|.       +-+++  .++....+..        ...+-++++++++..+++.+- .+.+.+
T Consensus       166 RHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~--~g~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~  243 (305)
T PF07433_consen  166 RHLAVDGDGTVAFAMQYQGDPGDAPPLVALHR--RGGALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRGGRVAV  243 (305)
T ss_pred             eeEEecCCCcEEEEEecCCCCCccCCeEEEEc--CCCcceeccCChHHHHhhCCceEEEEEeCCCCEEEEECCCCCEEEE
Confidence            99999999876665544432       33333  2333333332        245899999999988866654 678999


Q ss_pred             EeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcC
Q psy17610        321 WETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA  357 (515)
Q Consensus       321 ~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~  357 (515)
                      ||..+++.+......   .+..++..+++ ++++.+.
T Consensus       244 ~d~~tg~~~~~~~l~---D~cGva~~~~~-f~~ssG~  276 (305)
T PF07433_consen  244 WDAATGRLLGSVPLP---DACGVAPTDDG-FLVSSGQ  276 (305)
T ss_pred             EECCCCCEeeccccC---ceeeeeecCCc-eEEeCCC
Confidence            999999998887664   35566666666 5555554

>KOG1832|consensus

Probab=99.10  E-value=5.5e-11  Score=111.46  Aligned_cols=259  Identities=12%  Similarity=0.103  Sum_probs=175.4

Q ss_pred             EEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCC--cEEEEeC
Q psy17610         76 YLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKN--DIRIWSV  153 (515)
Q Consensus        76 ~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~--~i~iw~~  153 (515)
                      .+..|....+|++|+-+.++|++|+..|.|+++++.+|.... ...+|..+|+.+.-+.||..+++.+.-.  ...+|++
T Consensus      1096 ~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~-s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~ 1174 (1516)
T KOG1832|consen 1096 SFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEE-SVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDA 1174 (1516)
T ss_pred             hhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccc-cccccccccccccccCCcceeeeeccccCchHHHhcc
Confidence            355688999999999999999999999999999999985544 4567999999999999999888887733  4789998


Q ss_pred             CC-CceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCC---CCCCeEEEEEcCCCCEEEEecC
Q psy17610        154 RT-LNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNA---HNRGVTALAITQDGTRLLSGGG  229 (515)
Q Consensus       154 ~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~  229 (515)
                      .+ +.+.+.+.+    -.++.|+.....-+.|.......+||++++....++..+   .+..-++..|+|+..+++   .
T Consensus      1175 ~s~~~~~Hsf~e----d~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~D~LIl---n 1247 (1516)
T KOG1832|consen 1175 SSTGGPRHSFDE----DKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPCDTLIL---N 1247 (1516)
T ss_pred             ccccCccccccc----cceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCCCcceEe---e
Confidence            64 444555443    367888877666666766677999999999876664322   222337889999888776   3


Q ss_pred             CCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEE
Q psy17610        230 EGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQL  309 (515)
Q Consensus       230 d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l  309 (515)
                      ||  .+||.+..  ..++.+...+..+ .-.|+|.|..++.-++     +||+++.+.+.....-. -..+.|+..|..+
T Consensus      1248 dG--vLWDvR~~--~aIh~FD~ft~~~-~G~FHP~g~eVIINSE-----IwD~RTF~lLh~VP~Ld-qc~VtFNstG~Vm 1316 (1516)
T KOG1832|consen 1248 DG--VLWDVRIP--EAIHRFDQFTDYG-GGGFHPSGNEVIINSE-----IWDMRTFKLLHSVPSLD-QCAVTFNSTGDVM 1316 (1516)
T ss_pred             Cc--eeeeeccH--HHHhhhhhheecc-cccccCCCceEEeech-----hhhhHHHHHHhcCcccc-ceEEEeccCccch
Confidence            44  58999643  4444444444222 2358999999888664     89999887665443222 2356677777665


Q ss_pred             EEEEC------C-----------CeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEE
Q psy17610        310 ITCST------N-----------KMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTG  355 (515)
Q Consensus       310 ~~~~~------~-----------~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~  355 (515)
                      +..-.      |           ...+-+|...-+.+.++...  ..+..++-+|...++.+-
T Consensus      1317 Ya~~~~~d~~sdvh~~r~k~p~fSSFRTf~a~dYs~iaTi~v~--R~~~Dlct~~~D~~l~vI 1377 (1516)
T KOG1832|consen 1317 YAMLNIEDVMSDVHTRRVKHPLFSSFRTFDAIDYSDIATIPVD--RCLLDLCTEPTDSFLGVI 1377 (1516)
T ss_pred             hhhhhhhhhhhhhcccccccchhhhhccccccccccceeeecc--cchhhhhcCCccceEEEE
Confidence            54320      0           12333444444555555543  345555555555555543

>KOG1920|consensus

Probab=99.07  E-value=2.7e-06  Score=83.94  Aligned_cols=238  Identities=11%  Similarity=0.064  Sum_probs=154.6

Q ss_pred             CCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeC----CC
Q psy17610         80 DDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSV----RT  155 (515)
Q Consensus        80 ~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~----~~  155 (515)
                      .++.|.++.|-.+++-+..+...|.|.+-|.++. . ..+...-...|.+++|+||++.++..+.++++.+-.-    -.
T Consensus        67 gd~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~-~-~eivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT~~f~~i~  144 (1265)
T KOG1920|consen   67 GDDEIVSVQFLADTNSICVITALGDIILVDPETL-E-LEIVGNVDNGISAASWSPDEELLALITGRQTLLFMTKDFEPIA  144 (1265)
T ss_pred             CCcceEEEEEecccceEEEEecCCcEEEEccccc-c-eeeeeeccCceEEEeecCCCcEEEEEeCCcEEEEEeccccchh
Confidence            3468999999999999999999999999998873 2 2233336678999999999999999998888766432    11


Q ss_pred             -------------------CceeEEEEecC---------------------eEEEEEEEeeCCCEEEEE-----eCCCeE
Q psy17610        156 -------------------LNELLRISVMN---------------------MICACIVFTYDGKAILSG-----WNDGFI  190 (515)
Q Consensus       156 -------------------~~~~~~~~~~~---------------------~~v~~~~~~~~~~~l~~~-----~~dg~i  190 (515)
                                         |+....+.+..                     ..=+.+.|--||+++++.     .....|
T Consensus       145 E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~Rki  224 (1265)
T KOG1920|consen  145 EKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTRKI  224 (1265)
T ss_pred             ccccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCceeE
Confidence                               11112222111                     112358899999999873     233789


Q ss_pred             EEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEec---CCCcEEEEEccCCc-eeeEEeeccccCceEEEEEecCCC
Q psy17610        191 RCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGG---GEGQVRIWKLTRES-QSLQCVLKEHTSSVSVIQIKSDSK  266 (515)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d~~i~iw~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~  266 (515)
                      ++||-+ |.....- ......-.+++|-|.|..+++-.   .|+.|.+|.-+... +.....++.....+..++|+.++.
T Consensus       225 rV~drE-g~Lns~s-e~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL~hg~f~l~~p~de~~ve~L~Wns~sd  302 (1265)
T KOG1920|consen  225 RVYDRE-GALNSTS-EPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGLRHGEFVLPFPLDEKEVEELAWNSNSD  302 (1265)
T ss_pred             EEeccc-chhhccc-CcccccccceeecCCCCeEeeeeecCCCCcEEEEecCCccccccccCCcccccchheeeecCCCC
Confidence            999977 5443322 33444456899999999888653   45679999864321 222223344445589999999999


Q ss_pred             EEEE---EeCCCcEEEEEcccceE--EEEEEcCccEEEEEEcCCC-cEEEEEECCCeEEEEe
Q psy17610        267 EAMS---ASTDGTCVLWDLIKSTR--LIIMILPSMIMSAAYHPSE-VQLITCSTNKMIDYWE  322 (515)
Q Consensus       267 ~l~~---~~~d~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~i~~~d  322 (515)
                      .|+.   ......|.+|-+.+..-  .+.+..+.... +.|+|.. ..+.+-..+|...+++
T Consensus       303 iLAv~~~~~e~~~v~lwt~~NyhWYLKq~l~~~~~~~-~~W~p~~~~~L~v~~~sG~~~v~~  363 (1265)
T KOG1920|consen  303 ILAVVTSNLENSLVQLWTTGNYHWYLKQELQFSQKAL-LMWDPVTEKTLHVLRESGQRLVRD  363 (1265)
T ss_pred             ceeeeecccccceEEEEEecCeEEEEEEEEecccccc-ccccCCCceeEEEEecCCcEEEEE
Confidence            8887   44455599998876542  22333333322 6777743 2333333455544444

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=99.07  E-value=5.8e-07  Score=85.79  Aligned_cols=276  Identities=12%  Similarity=0.148  Sum_probs=168.9

Q ss_pred             CCEEEEEecCceEEEEECCCCceeEEeeccCc-----cCeE--EEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEec
Q psy17610         93 NNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHT-----SAIY--DLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVM  165 (515)
Q Consensus        93 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~-----~~v~--~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~  165 (515)
                      +..+++++.++.+.-.|..+|+.+-.......     ..+.  .+... ++..++.++.++.|.-+|.++|+.+.+....
T Consensus        61 ~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~-~~~~V~v~~~~g~v~AlD~~TG~~~W~~~~~  139 (488)
T cd00216          61 DGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYW-DPRKVFFGTFDGRLVALDAETGKQVWKFGNN  139 (488)
T ss_pred             CCEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEc-cCCeEEEecCCCeEEEEECCCCCEeeeecCC
Confidence            55677788889999999999866654432111     0110  11111 2258888888999999999999999887644


Q ss_pred             CeE-----EE-EEEEeeCCCEEEEEe---------CCCeEEEEecCCCceEEEecCCCCCC-------------------
Q psy17610        166 NMI-----CA-CIVFTYDGKAILSGW---------NDGFIRCFTPQSGKLKFIIPNAHNRG-------------------  211 (515)
Q Consensus       166 ~~~-----v~-~~~~~~~~~~l~~~~---------~dg~i~~~~~~~~~~~~~~~~~~~~~-------------------  211 (515)
                      ...     +. ...+.  +..++.++         .++.+..+|..+|+.+..........                   
T Consensus       140 ~~~~~~~~i~ssP~v~--~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~  217 (488)
T cd00216         140 DQVPPGYTMTGAPTIV--KKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGT  217 (488)
T ss_pred             CCcCcceEecCCCEEE--CCEEEEeccccccccCCCCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCCCC
Confidence            321     11 12222  24455554         36789999999999887764322110                   


Q ss_pred             e-EEEEEcCCCCEEEEecCCC------------------cEEEEEccCCceeeEEeeccccC----ceEEEEEe----cC
Q psy17610        212 V-TALAITQDGTRLLSGGGEG------------------QVRIWKLTRESQSLQCVLKEHTS----SVSVIQIK----SD  264 (515)
Q Consensus       212 v-~~~~~~~~~~~l~~~~~d~------------------~i~iw~~~~~~~~~~~~~~~~~~----~v~~~~~~----~~  264 (515)
                      + ...++.+.+..++.++.++                  .+.-+|..+.+.........|..    ......+.    -+
T Consensus       218 vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~  297 (488)
T cd00216         218 SWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQTTPHDLWDYDGPNQPSLADIKPKD  297 (488)
T ss_pred             ccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEeeCCCCCCcccccCCCCeEEeccccC
Confidence            1 1234455566777777665                  57777876555444433322211    00001111    13


Q ss_pred             CC---EEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEE------------------ECCCeEEEEeC
Q psy17610        265 SK---EAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITC------------------STNKMIDYWET  323 (515)
Q Consensus       265 ~~---~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~------------------~~~~~i~~~d~  323 (515)
                      +.   .++.++.+|.+...|.++++.+.......  ..++..|  ..++.+                  ..+|.+.-+|+
T Consensus       298 g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~~--~~~~~~~--~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~  373 (488)
T cd00216         298 GKPVPAIVHAPKNGFFYVLDRTTGKLISARPEVE--QPMAYDP--GLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDP  373 (488)
T ss_pred             CCeeEEEEEECCCceEEEEECCCCcEeeEeEeec--cccccCC--ceEEEccccccccCcccccCCCCCCCceEEEEEeC
Confidence            33   57788889999999999999887765431  1223334  233332                  23678999999


Q ss_pred             CCCceEEEEecCCC-------ccE--EEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccC
Q psy17610        324 CDGSIIRSLEGSDV-------AAV--NCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIG  377 (515)
Q Consensus       324 ~~~~~~~~~~~~~~-------~~i--~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~  377 (515)
                      .+++.+.+......       .+.  ..+..  .+..+++++.||.++.+|.++|+.+.+.+-
T Consensus       374 ~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~--~g~~v~~g~~dG~l~ald~~tG~~lW~~~~  434 (488)
T cd00216         374 KTGKVVWEKREGTIRDSWNIGFPHWGGSLAT--AGNLVFAGAADGYFRAFDATTGKELWKFRT  434 (488)
T ss_pred             CCCcEeeEeeCCccccccccCCcccCcceEe--cCCeEEEECCCCeEEEEECCCCceeeEEEC
Confidence            99998887765410       011  11222  457888999999999999999998877654

The alignment model contains an 8-bladed beta-propeller.

>KOG3914|consensus

Probab=99.05  E-value=5.4e-09  Score=89.57  Aligned_cols=162  Identities=14%  Similarity=0.150  Sum_probs=119.0

Q ss_pred             eEEEEEcCCCCEEEEecCCCcEEEEEccCCce--eeEEeeccccCceEEEEEecCCCEEEEEeC---CCcEEEEEcccce
Q psy17610        212 VTALAITQDGTRLLSGGGEGQVRIWKLTRESQ--SLQCVLKEHTSSVSVIQIKSDSKEAMSAST---DGTCVLWDLIKST  286 (515)
Q Consensus       212 v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~iwd~~~~~  286 (515)
                      ...+..++.++++|.+..+....++++.....  ++...... ...-+.+.+..+......+..   ...+.+|....+.
T Consensus        65 ~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v-~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~  143 (390)
T KOG3914|consen   65 PALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSCV-PKRPTAISFIREDTSVLVADKAGDVYSFDILSADSGR  143 (390)
T ss_pred             ccccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEeec-ccCcceeeeeeccceEEEEeecCCceeeeeecccccC
Confidence            34456677888899888888877877754432  22222221 222344555455555554444   3445555555577


Q ss_pred             EEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEc
Q psy17610        287 RLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMY  366 (515)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~  366 (515)
                      ....+.+-+.+..++++||+++++++..|..|++-.......+..+-..|..-|..++.-++ ..|++++.|+++++||+
T Consensus       144 ~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~-~~LlS~sGD~tlr~Wd~  222 (390)
T KOG3914|consen  144 CEPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDN-YLLLSGSGDKTLRLWDI  222 (390)
T ss_pred             cchhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccC-ceeeecCCCCcEEEEec
Confidence            77777788899999999999999999999999999988888888888767688999999875 45899999999999999


Q ss_pred             cCCeeeeec
Q psy17610        367 REGVPCFVG  375 (515)
Q Consensus       367 ~~~~~~~~~  375 (515)
                      .+|+.+.++
T Consensus       223 ~sgk~L~t~  231 (390)
T KOG3914|consen  223 TSGKLLDTC  231 (390)
T ss_pred             ccCCccccc
Confidence            999887655

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=99.04  E-value=6.2e-06  Score=71.42  Aligned_cols=248  Identities=15%  Similarity=0.134  Sum_probs=156.1

Q ss_pred             EEEEecCCCEEEEEe----------cCceEEEEECCCCceeEEe-ecc-Ccc----CeEEEEeCCCCcEEEEEec--CCc
Q psy17610         86 SLQYNPVNNKVFVGT----------VNCEIFLIDMNSGFTLTLV-NTC-HTS----AIYDLQFPVNFSSVFATCS--KND  147 (515)
Q Consensus        86 ~~~~s~~~~~l~~~~----------~d~~i~iw~~~~~~~~~~~-~~~-h~~----~v~~~~~~~~~~~l~~~~~--d~~  147 (515)
                      .+++||+++.++++.          ..-.|.+||.++-.....+ +.+ |..    ....++++.|++++++.-.  -.+
T Consensus        40 ~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~TPa~S  119 (342)
T PF06433_consen   40 NVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFTPATS  119 (342)
T ss_dssp             EEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEESSSEE
T ss_pred             ceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheecccccceEEccCCcEEEEEccCCCCe
Confidence            366799999888753          2346999999984333222 221 111    2234678899998888765  567


Q ss_pred             EEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecC-CCceEEE---ecCCCCCCe-EEEEEcCCCC
Q psy17610        148 IRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQ-SGKLKFI---IPNAHNRGV-TALAITQDGT  222 (515)
Q Consensus       148 i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~-~~~~~~~---~~~~~~~~v-~~~~~~~~~~  222 (515)
                      |.|-|+..++.+..+.....  ..+ +-...+.+.+.+.||.+.-..+. .|+....   +......++ ..-++...+.
T Consensus       120 VtVVDl~~~kvv~ei~~PGC--~~i-yP~~~~~F~~lC~DGsl~~v~Ld~~Gk~~~~~t~~F~~~~dp~f~~~~~~~~~~  196 (342)
T PF06433_consen  120 VTVVDLAAKKVVGEIDTPGC--WLI-YPSGNRGFSMLCGDGSLLTVTLDADGKEAQKSTKVFDPDDDPLFEHPAYSRDGG  196 (342)
T ss_dssp             EEEEETTTTEEEEEEEGTSE--EEE-EEEETTEEEEEETTSCEEEEEETSTSSEEEEEEEESSTTTS-B-S--EEETTTT
T ss_pred             EEEEECCCCceeeeecCCCE--EEE-EecCCCceEEEecCCceEEEEECCCCCEeEeeccccCCCCcccccccceECCCC
Confidence            99999999888887765432  111 21123468888899999888887 4554322   112222222 2334555555


Q ss_pred             EEEEecCCCcEEEEEccCCceeeEEeecc----------ccCceEEEEEecCCCEEEEEeC---C-------CcEEEEEc
Q psy17610        223 RLLSGGGEGQVRIWKLTRESQSLQCVLKE----------HTSSVSVIQIKSDSKEAMSAST---D-------GTCVLWDL  282 (515)
Q Consensus       223 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~l~~~~~---d-------~~i~iwd~  282 (515)
                      .++--+.+|.|+--|+..........+.-          ..+.-..+++++..++|+..-.   +       ..|.++|+
T Consensus       197 ~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~  276 (342)
T PF06433_consen  197 RLYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDL  276 (342)
T ss_dssp             EEEEEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEET
T ss_pred             eEEEEecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEEC
Confidence            66667888999999987655444443321          1223455778776666554322   1       15888899


Q ss_pred             ccceEEEEEEcCccEEEEEEcCCCc-EEEEEE-CCCeEEEEeCCCCceEEEEecCC
Q psy17610        283 IKSTRLIIMILPSMIMSAAYHPSEV-QLITCS-TNKMIDYWETCDGSIIRSLEGSD  336 (515)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~-~~~~i~~~d~~~~~~~~~~~~~~  336 (515)
                      .+++.+..+....++.++..+.+.+ +|++.+ .++.+.+||..+++.++++..-.
T Consensus       277 ~t~krv~Ri~l~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~~lG  332 (342)
T PF06433_consen  277 KTHKRVARIPLEHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIEQLG  332 (342)
T ss_dssp             TTTEEEEEEEEEEEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE---S
T ss_pred             CCCeEEEEEeCCCccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehhccC
Confidence            9999999999988899999999876 444444 47899999999999999887543

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=99.00  E-value=3.3e-06  Score=80.69  Aligned_cols=236  Identities=13%  Similarity=0.132  Sum_probs=143.1

Q ss_pred             CEEEEEecCceEEEEECCCCceeEEeeccCcc-CeEEEEeCC--CCcEEEEEe---------cCCcEEEEeCCCCceeEE
Q psy17610         94 NKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTS-AIYDLQFPV--NFSSVFATC---------SKNDIRIWSVRTLNELLR  161 (515)
Q Consensus        94 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~-~v~~~~~~~--~~~~l~~~~---------~d~~i~iw~~~~~~~~~~  161 (515)
                      ..++.++.++.|+-+|.++|+.+-........ .-..+.-+|  .+..++.++         .++.+.-.|.++|+.+.+
T Consensus       111 ~~V~v~~~~g~v~AlD~~TG~~~W~~~~~~~~~~~~~i~ssP~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~  190 (488)
T cd00216         111 RKVFFGTFDGRLVALDAETGKQVWKFGNNDQVPPGYTMTGAPTIVKKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWR  190 (488)
T ss_pred             CeEEEecCCCeEEEEECCCCCEeeeecCCCCcCcceEecCCCEEECCEEEEeccccccccCCCCcEEEEEECCCCceeeE
Confidence            67888888999999999998776554322110 000111111  123555554         257889999999999887


Q ss_pred             EEecCe--------------------EE-EEEEEeeCCCEEEEEeCCC------------------eEEEEecCCCceEE
Q psy17610        162 ISVMNM--------------------IC-ACIVFTYDGKAILSGWNDG------------------FIRCFTPQSGKLKF  202 (515)
Q Consensus       162 ~~~~~~--------------------~v-~~~~~~~~~~~l~~~~~dg------------------~i~~~~~~~~~~~~  202 (515)
                      +.....                    .+ ...++.+.+..++.++.++                  .+.-+|.++|+...
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W  270 (488)
T cd00216         191 FYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKW  270 (488)
T ss_pred             eeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEE
Confidence            764211                    01 1234455566788777665                  79999999999988


Q ss_pred             EecCCCCC-----CeEEEEEc----CCCC---EEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEE
Q psy17610        203 IIPNAHNR-----GVTALAIT----QDGT---RLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMS  270 (515)
Q Consensus       203 ~~~~~~~~-----~v~~~~~~----~~~~---~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  270 (515)
                      .....+..     ......+.    -++.   .++.++.+|.+...|..+.+.........     ..+..+|  ..++.
T Consensus       271 ~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~~-----~~~~~~~--~~vyv  343 (488)
T cd00216         271 FYQTTPHDLWDYDGPNQPSLADIKPKDGKPVPAIVHAPKNGFFYVLDRTTGKLISARPEVE-----QPMAYDP--GLVYL  343 (488)
T ss_pred             EeeCCCCCCcccccCCCCeEEeccccCCCeeEEEEEECCCceEEEEECCCCcEeeEeEeec-----cccccCC--ceEEE
Confidence            76433211     00011111    1333   57788889999999986554433322211     1122233  22222


Q ss_pred             E------------------eCCCcEEEEEcccceEEEEEEcC---------ccEEEEEEcCCCcEEEEEECCCeEEEEeC
Q psy17610        271 A------------------STDGTCVLWDLIKSTRLIIMILP---------SMIMSAAYHPSEVQLITCSTNKMIDYWET  323 (515)
Q Consensus       271 ~------------------~~d~~i~iwd~~~~~~~~~~~~~---------~~~~~~~~~~~~~~l~~~~~~~~i~~~d~  323 (515)
                      +                  ..+|.+...|+.+++.+-.....         .+...-.....+..+++++.+|.++.+|.
T Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~~g~~v~~g~~dG~l~ald~  423 (488)
T cd00216         344 GAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLATAGNLVFAGAADGYFRAFDA  423 (488)
T ss_pred             ccccccccCcccccCCCCCCCceEEEEEeCCCCcEeeEeeCCccccccccCCcccCcceEecCCeEEEECCCCeEEEEEC
Confidence            1                  23578888899988887776654         11111111225678888899999999999


Q ss_pred             CCCceEEEEecCC
Q psy17610        324 CDGSIIRSLEGSD  336 (515)
Q Consensus       324 ~~~~~~~~~~~~~  336 (515)
                      .+|+.+.+.+...
T Consensus       424 ~tG~~lW~~~~~~  436 (488)
T cd00216         424 TTGKELWKFRTPS  436 (488)
T ss_pred             CCCceeeEEECCC
Confidence            9999999887643

The alignment model contains an 8-bladed beta-propeller.

>KOG1275|consensus

Probab=99.00  E-value=4.9e-09  Score=99.08  Aligned_cols=182  Identities=16%  Similarity=0.219  Sum_probs=141.3

Q ss_pred             CCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCce
Q psy17610        177 DGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSV  256 (515)
Q Consensus       177 ~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v  256 (515)
                      ++..++.|+-...+..+|+.+.+...... -....|+-++.  +++.+.+|...|+|.+-|.  .+.+.++++..|++.|
T Consensus       146 ~~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~-v~a~~v~imR~--Nnr~lf~G~t~G~V~LrD~--~s~~~iht~~aHs~si  220 (1118)
T KOG1275|consen  146 GPSTLIMGGLQEKLIHIDLNTEKETRTTN-VSASGVTIMRY--NNRNLFCGDTRGTVFLRDP--NSFETIHTFDAHSGSI  220 (1118)
T ss_pred             CCcceeecchhhheeeeecccceeeeeee-ccCCceEEEEe--cCcEEEeecccceEEeecC--CcCceeeeeeccccce
Confidence            45567888888889999999988877652 33334666655  5789999999999999999  5677888999999999


Q ss_pred             EEEEEecCCCEEEEEeC---------CCcEEEEEcccceEEEEEEcCccEEEEEEcCC-CcEEEEEECCCeEEEEeCC--
Q psy17610        257 SVIQIKSDSKEAMSAST---------DGTCVLWDLIKSTRLIIMILPSMIMSAAYHPS-EVQLITCSTNKMIDYWETC--  324 (515)
Q Consensus       257 ~~~~~~~~~~~l~~~~~---------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~i~~~d~~--  324 (515)
                      ..+.  -.|+.|++++.         |.-|++||++..+.+..+..+....-+.|+|. ...+++++..|...+-|..  
T Consensus       221 SDfD--v~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P~flrf~Psl~t~~~V~S~sGq~q~vd~~~l  298 (1118)
T KOG1275|consen  221 SDFD--VQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGPQFLRFHPSLTTRLAVTSQSGQFQFVDTATL  298 (1118)
T ss_pred             eeee--ccCCeEEEeecccccccccccchhhhhhhhhhhccCCcccccCchhhhhcccccceEEEEecccceeecccccc
Confidence            8755  47889998875         55689999999988887777776677788885 4678888899999998833  


Q ss_pred             -CCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEE
Q psy17610        325 -DGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWM  365 (515)
Q Consensus       325 -~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d  365 (515)
                       ....-.....+....+..+.++++++.++.|..+|.|.+|.
T Consensus       299 sNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa  340 (1118)
T KOG1275|consen  299 SNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWA  340 (1118)
T ss_pred             CCCccceeEEccCCCcceeEEecCCCceEEEecccCcEeeec
Confidence             32222222223335599999999999999999999999997

>KOG1920|consensus

Probab=98.97  E-value=2.2e-06  Score=84.51  Aligned_cols=276  Identities=11%  Similarity=0.099  Sum_probs=159.5

Q ss_pred             ccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEE
Q psy17610        124 TSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFI  203 (515)
Q Consensus       124 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~  203 (515)
                      .+.|.++.|..+...++.+..+|.|.+-|.++... .....-...|.+++|+||++.++..+..+++.+-. .+..++..
T Consensus        68 d~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~-eivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT-~~f~~i~E  145 (1265)
T KOG1920|consen   68 DDEIVSVQFLADTNSICVITALGDIILVDPETLEL-EIVGNVDNGISAASWSPDEELLALITGRQTLLFMT-KDFEPIAE  145 (1265)
T ss_pred             CcceEEEEEecccceEEEEecCCcEEEEcccccce-eeeeeccCceEEEeecCCCcEEEEEeCCcEEEEEe-ccccchhc
Confidence            35899999999999999999999999998876543 22333566799999999999999998888776643 22222222


Q ss_pred             ecC----CCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEe-----CC
Q psy17610        204 IPN----AHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAS-----TD  274 (515)
Q Consensus       204 ~~~----~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-----~d  274 (515)
                      .+.    ...+....+-|-.....+ -|+. |.....+... ..+......-+ +.=+.+.|-.||+++++..     ..
T Consensus       146 ~~L~~d~~~~sk~v~VGwGrkeTqf-rgs~-gr~~~~~~~~-~ek~~~~~~~~-~~~~~IsWRgDg~~fAVs~~~~~~~~  221 (1265)
T KOG1920|consen  146 KPLDADDERKSKFVNVGWGRKETQF-RGSE-GRQAARQKIE-KEKALEQIEQD-DHKTSISWRGDGEYFAVSFVESETGT  221 (1265)
T ss_pred             cccccccccccccceecccccceee-ecch-hhhccccccc-ccccccchhhc-cCCceEEEccCCcEEEEEEEeccCCc
Confidence            110    111222333343322111 1111 2222211110 00000000112 2224688999999988732     23


Q ss_pred             CcEEEEEcccceEEEE-EEcCccEEEEEEcCCCcEEEEEEC---CCeEEEEeCCC---CceEEEEecCCCccEEEEEEcC
Q psy17610        275 GTCVLWDLIKSTRLII-MILPSMIMSAAYHPSEVQLITCST---NKMIDYWETCD---GSIIRSLEGSDVAAVNCVDFVD  347 (515)
Q Consensus       275 ~~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~---~~~i~~~d~~~---~~~~~~~~~~~~~~i~~~~~~~  347 (515)
                      +.+++||-+ +..-.. ......-.+++|-|.|..+++...   ++.|.+|.-+.   ++....+.... ..+..++|+.
T Consensus       222 RkirV~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL~hg~f~l~~p~de-~~ve~L~Wns  299 (1265)
T KOG1920|consen  222 RKIRVYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGLRHGEFVLPFPLDE-KEVEELAWNS  299 (1265)
T ss_pred             eeEEEeccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecCCccccccccCCcccc-cchheeeecC
Confidence            789999976 222111 112234578999999999887543   55688887432   22222222222 3488999999


Q ss_pred             CCCEEEE---EcCCCeEEEEEccCCe--eeeeccCCCCCeeEEEECCC-CcEEEEEeCCCcEEEEeCC
Q psy17610        348 DGKYFLT---GGADQIVKMWMYREGV--PCFVGIGHAASITKIKISPD-KKVIVSVSADGGIFLWTFP  409 (515)
Q Consensus       348 ~~~~l~~---~~~dg~i~i~d~~~~~--~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~i~iw~~~  409 (515)
                      ++..|++   ......|++|-+.+..  ....+.-.....  +.|+|. ...|..-..+|...++++.
T Consensus       300 ~sdiLAv~~~~~e~~~v~lwt~~NyhWYLKq~l~~~~~~~--~~W~p~~~~~L~v~~~sG~~~v~~~~  365 (1265)
T KOG1920|consen  300 NSDILAVVTSNLENSLVQLWTTGNYHWYLKQELQFSQKAL--LMWDPVTEKTLHVLRESGQRLVRDFA  365 (1265)
T ss_pred             CCCceeeeecccccceEEEEEecCeEEEEEEEEecccccc--ccccCCCceeEEEEecCCcEEEEEEE
Confidence            9999998   4555569999887642  112222122222  888883 2334444467777666654

>KOG3617|consensus

Probab=98.92  E-value=1.7e-07  Score=88.28  Aligned_cols=310  Identities=10%  Similarity=0.078  Sum_probs=172.7

Q ss_pred             EEEEeCCCCcEEEEEec----CCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEE
Q psy17610        128 YDLQFPVNFSSVFATCS----KNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFI  203 (515)
Q Consensus       128 ~~~~~~~~~~~l~~~~~----d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~  203 (515)
                      +-..|+|..+.+++++-    .|.|.|+- ++|++-+... ..-.+++++|+|..-.|+.|..-|.+.+|...+.+.. +
T Consensus        19 ti~SWHPsePlfAVA~fS~er~GSVtIfa-dtGEPqr~Vt-~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~h-t   95 (1416)
T KOG3617|consen   19 TISSWHPSEPLFAVASFSPERGGSVTIFA-DTGEPQRDVT-YPVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETH-T   95 (1416)
T ss_pred             cccccCCCCceeEEEEecCCCCceEEEEe-cCCCCCcccc-cceehhhhccChHHHHHhhccccceeEEEecCCceee-e
Confidence            34578999888888764    67888884 6677544333 2234577999999989999999999999997765544 4


Q ss_pred             ecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccc--cCceE--EEEEecCCCE------EEEEeC
Q psy17610        204 IPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEH--TSSVS--VIQIKSDSKE------AMSAST  273 (515)
Q Consensus       204 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~--~~~v~--~~~~~~~~~~------l~~~~~  273 (515)
                      ....|..+|..+.|+++|..++++..-|.+.+|............+..|  ...++  +...++++.-      .+.++.
T Consensus        96 v~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d~~g~~q~~~~~~hel~~~ltl~cfRL~~~~Ee~~~laKaaVtgD  175 (1416)
T KOG3617|consen   96 VVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYDVIGEIQTSNIMQHELNDQLTLWCFRLSYDREEKFKLAKAAVTGD  175 (1416)
T ss_pred             eccCCCCCceeEEecCCCCeEEEcCCCceeEEEEeeeccccccchhhhhHhhceeeEEEEecCCChHHhhhhhhhhccCc
Confidence            4579999999999999999999999999999999863221111111122  12233  3333455321      223333


Q ss_pred             CCcEE-EEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEE
Q psy17610        274 DGTCV-LWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYF  352 (515)
Q Consensus       274 d~~i~-iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l  352 (515)
                      +..+- .++.+..........       .=.|+|..++.++.+|+|+..|- .+++....+...  . -.+-|.+.-.-+
T Consensus       176 e~alD~~fnwk~~~a~rs~~k-------sgv~~g~~F~~~~~~GtVyyvdq-~g~~~~V~k~dS--~-vQmLf~~~~eai  244 (1416)
T KOG3617|consen  176 ESALDEPFNWKESLAERSDEK-------SGVPKGTEFLFAGKSGTVYYVDQ-NGRQRTVHKLDS--E-VQMLFMGYCEAI  244 (1416)
T ss_pred             hhhhcccccCccchhhccccc-------cCCCCCcEEEEEcCCceEEEEcC-CCcEEEEEEccc--h-HHHHHhcccceE
Confidence            33332 333221111111111       12477888899999999988874 333333222211  0 011122211111


Q ss_pred             EEEcCCCeEEEEEcc-----------------------------CCee--eee-ccCCCCCeeEEEECCCCcEEEEEeCC
Q psy17610        353 LTGGADQIVKMWMYR-----------------------------EGVP--CFV-GIGHAASITKIKISPDKKVIVSVSAD  400 (515)
Q Consensus       353 ~~~~~dg~i~i~d~~-----------------------------~~~~--~~~-~~~~~~~i~~~~~~~~~~~l~~~~~d  400 (515)
                      .+--.+-.+.++-..                             .|..  ... -......+++++++..+..|+.+...
T Consensus       245 ~~i~e~lr~~l~~v~~~G~~ee~~~vk~sgk~GgrqGgiA~sEssGvLr~~eKyg~e~ge~~~c~cY~~~~~~l~agt~~  324 (1416)
T KOG3617|consen  245 SIIIEFLRDCLIFVLAKGTSEERCAVKVSGKLGGRQGGIACSESSGVLRKSEKYGLELGEGILCMCYGEKEIRLWAGTKE  324 (1416)
T ss_pred             EEEeeeceeeEEEecCCCchHHhhhhhhccccCCccCccccccccccccCCcchhhhcCCceEEEEEeccceEEEecccC
Confidence            111111111111100                             0100  000 01234578999999999999999999


Q ss_pred             CcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeec
Q psy17610        401 GGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCST  461 (515)
Q Consensus       401 g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~  461 (515)
                      |.+.+|.-........+....      ..    ........+.|+.+.|.|-.+.++.-+.
T Consensus       325 gnv~~w~~v~~~f~g~p~~d~------w~----l~~~~e~~g~I~~i~Wg~~k~~~avn~~  375 (1416)
T KOG3617|consen  325 GNVTIWLDVNKGFQGDPTIDV------WT----LNGKRESLGKISLIRWGPIKSTAAVNTE  375 (1416)
T ss_pred             CcEEEeeecCccccCCCCcce------EE----ecCchhhccceEEEEeccccchhhhhhh
Confidence            999999643221111110000      00    0001112345888999887666555443

>KOG1897|consensus

Probab=98.92  E-value=7.5e-05  Score=72.57  Aligned_cols=403  Identities=12%  Similarity=0.076  Sum_probs=223.9

Q ss_pred             CCCcEEEEEEecCC---C---EEEEEecCceEEEE-ECCCCceeEEe-ecc--CccCeEEEEeCCCCcEEEEEecCCcEE
Q psy17610         80 DDSGISSLQYNPVN---N---KVFVGTVNCEIFLI-DMNSGFTLTLV-NTC--HTSAIYDLQFPVNFSSVFATCSKNDIR  149 (515)
Q Consensus        80 ~~~~v~~~~~s~~~---~---~l~~~~~d~~i~iw-~~~~~~~~~~~-~~~--h~~~v~~~~~~~~~~~l~~~~~d~~i~  149 (515)
                      -...|.|+.++|-|   +   ++|+|..+..+.+. -..+...+... +.+  -...|.-..|-.|..+|+++..||.+.
T Consensus       529 ~e~evaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l~~~pd~~~~~~~~l~~~~iPRSIl~~~~e~d~~yLlvalgdG~l~  608 (1096)
T KOG1897|consen  529 FEYEVACLDISPLGDAPNKSRLLAVGLWSDISMILTFLPDLILITHEQLSGEIIPRSILLTTFEGDIHYLLVALGDGALL  608 (1096)
T ss_pred             ecceeEEEecccCCCCCCcceEEEEEeecceEEEEEECCCcceeeeeccCCCccchheeeEEeeccceEEEEEcCCceEE
Confidence            45789999999842   2   78888766554443 33332222222 111  123455556666678999999999987


Q ss_pred             EEeCC--CCcee--EEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeE-EEEEcC--CCC
Q psy17610        150 IWSVR--TLNEL--LRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVT-ALAITQ--DGT  222 (515)
Q Consensus       150 iw~~~--~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~--~~~  222 (515)
                      -+.+.  ++..-  ++..-...++.--.|+..++.-+.+..|.-..+|.. +++....-. .- ..+. ...|+.  -..
T Consensus       609 ~fv~d~~tg~lsd~Kk~~lGt~P~~Lr~f~sk~~t~vfa~sdrP~viY~~-n~kLv~spl-s~-kev~~~c~f~s~a~~d  685 (1096)
T KOG1897|consen  609 YFVLDINTGQLSDRKKVTLGTQPISLRTFSSKSRTAVFALSDRPTVIYSS-NGKLVYSPL-SL-KEVNHMCPFNSDAYPD  685 (1096)
T ss_pred             EEEEEcccceEccccccccCCCCcEEEEEeeCCceEEEEeCCCCEEEEec-CCcEEEecc-ch-HHhhhhcccccccCCc
Confidence            66554  44321  222234455666667666554444444554555543 333332211 11 1111 112322  123


Q ss_pred             EEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeC-----------C---CcEEEEEcccceEE
Q psy17610        223 RLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST-----------D---GTCVLWDLIKSTRL  288 (515)
Q Consensus       223 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----------d---~~i~iwd~~~~~~~  288 (515)
                      .++++.. +.+++.-++.-.....++.+-+ .....+++.+....+.+.+.           .   ..++++|-++.+..
T Consensus       686 ~l~~~~~-~~l~i~tid~iqkl~irtvpl~-~~prrI~~q~~sl~~~v~s~r~e~~~~~~~ee~~~s~l~vlD~nTf~vl  763 (1096)
T KOG1897|consen  686 SLASANG-GALTIGTIDEIQKLHIRTVPLG-ESPRRICYQESSLTFGVLSNRIESSAEYYGEEYEVSFLRVLDQNTFEVL  763 (1096)
T ss_pred             eEEEecC-CceEEEEecchhhcceeeecCC-CChhheEecccceEEEEEecccccchhhcCCcceEEEEEEecCCceeEE
Confidence            4555544 5688877754333334444333 34456666664444433322           1   13667777776666


Q ss_pred             EEEEcCc-----cEEEEEEcCC-CcEEEEEEC----------CCeEEEEeCCCCceEEEEec-CCCccEEEEEEcCCCCE
Q psy17610        289 IIMILPS-----MIMSAAYHPS-EVQLITCST----------NKMIDYWETCDGSIIRSLEG-SDVAAVNCVDFVDDGKY  351 (515)
Q Consensus       289 ~~~~~~~-----~~~~~~~~~~-~~~l~~~~~----------~~~i~~~d~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~  351 (515)
                      ...+...     .+.++.|..| +.++++|+.          .|.|.+|.....+.++.... .-.+.+.++..- +|++
T Consensus       764 ~~hef~~~E~~~Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v~Gav~aL~~f-ngkl  842 (1096)
T KOG1897|consen  764 SSHEFERNETALSIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVVKGAVYALVEF-NGKL  842 (1096)
T ss_pred             eeccccccceeeeeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeeeccceeehhhh-CCeE
Confidence            5544432     3555568777 677777652          47788887776433333322 112344443322 5676


Q ss_pred             EEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeeccccc
Q psy17610        352 FLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTAR  431 (515)
Q Consensus       352 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~  431 (515)
                      +|.-  +..|++|+..+.+.++.-..|..++..+...-.+..+++|+.-+++.+-..+..+....               
T Consensus       843 lA~I--n~~vrLye~t~~~eLr~e~~~~~~~~aL~l~v~gdeI~VgDlm~Sitll~y~~~eg~f~---------------  905 (1096)
T KOG1897|consen  843 LAGI--NQSVRLYEWTTERELRIECNISNPIIALDLQVKGDEIAVGDLMRSITLLQYKGDEGNFE---------------  905 (1096)
T ss_pred             EEec--CcEEEEEEccccceehhhhcccCCeEEEEEEecCcEEEEeeccceEEEEEEeccCCceE---------------
Confidence            6654  45899999998878877778889999999999999999999988888776654431111               


Q ss_pred             ccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCC-------------------CeeeeeecccccceEEE--E
Q psy17610        432 STRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCD-------------------GSIIRSLEGSDVAAVNC--V  490 (515)
Q Consensus       432 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~-------------------~~~~~~~~~~~~~~v~~--~  490 (515)
                        ......++.+++++.+-.+.. .+.+..+|.+.+-...+                   |+.+..+.  +..-|.+  -
T Consensus       906 --evArD~~p~Wmtaveil~~d~-ylgae~~gNlf~v~~d~~~~td~eR~~l~~~~~~hlGelvn~f~--hg~lv~~~~~  980 (1096)
T KOG1897|consen  906 --EVARDYNPNWMTAVEILDDDT-YLGAENSGNLFTVRKDSDATTDEERQILEEVGKFHLGELVNKFR--HGSLVMQLGD  980 (1096)
T ss_pred             --EeehhhCccceeeEEEecCce-EEeecccccEEEEEecCCCCchhhhhcccceeeEEeccceeeee--ecceEeeccc
Confidence              111122445667776665444 44455677776655432                   11122221  2123333  1


Q ss_pred             EEcCCCcEEEEeecCCeEEE
Q psy17610        491 DFVDDGKYFLTGGADQIVKI  510 (515)
Q Consensus       491 ~~s~~~~~l~s~~~dg~v~i  510 (515)
                      ..+|-+..+..|..+|.|-+
T Consensus       981 s~~~~~~~vlfgTv~GsIG~ 1000 (1096)
T KOG1897|consen  981 SMIPLEPKVLFGTVNGSIGI 1000 (1096)
T ss_pred             cccCCCCcEEEEEccceEEE
Confidence            33455556778888888765

>KOG1645|consensus

Probab=98.90  E-value=2.3e-07  Score=79.83  Aligned_cols=255  Identities=10%  Similarity=0.075  Sum_probs=159.5

Q ss_pred             EEEEeCCCCceeEEEEecCeEEEEEEEeeCCC-EEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCC-CEEE
Q psy17610        148 IRIWSVRTLNELLRISVMNMICACIVFTYDGK-AILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDG-TRLL  225 (515)
Q Consensus       148 i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~  225 (515)
                      +++.+..+.+...-+..+...|..++|+|..+ ++..++.+..|++.|+++......+ ..+ ..+.+++|.-+. +++.
T Consensus       175 v~~l~~~~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy-~a~-~~~wSC~wDlde~h~IY  252 (463)
T KOG1645|consen  175 VQKLESHDFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSY-IAY-NQIWSCCWDLDERHVIY  252 (463)
T ss_pred             eEEeccCCcchhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeehe-ecc-CCceeeeeccCCcceeE
Confidence            55555555555566667778899999999887 6788999999999999999888777 345 789999998854 5677


Q ss_pred             EecCCCcEEEEEccCCceeeEEeecc--ccCceEEEEE------ecCCCEEEEEeCCCcEEEEEcc----cceEEEEEEc
Q psy17610        226 SGGGEGQVRIWKLTRESQSLQCVLKE--HTSSVSVIQI------KSDSKEAMSASTDGTCVLWDLI----KSTRLIIMIL  293 (515)
Q Consensus       226 ~~~~d~~i~iw~~~~~~~~~~~~~~~--~~~~v~~~~~------~~~~~~l~~~~~d~~i~iwd~~----~~~~~~~~~~  293 (515)
                      .|..+|.|.+||++..+.... .+.+  ...+|..++.      .+.+.+++....+  +..|++.    ...++..+..
T Consensus       253 aGl~nG~VlvyD~R~~~~~~~-e~~a~~t~~pv~~i~~~~~n~~f~~gglLv~~lt~--l~f~ei~~s~~~~p~vlele~  329 (463)
T KOG1645|consen  253 AGLQNGMVLVYDMRQPEGPLM-ELVANVTINPVHKIAPVQPNKIFTSGGLLVFALTV--LQFYEIVFSAECLPCVLELEP  329 (463)
T ss_pred             EeccCceEEEEEccCCCchHh-hhhhhhccCcceeecccCccccccccceEEeeehh--hhhhhhhccccCCCcccccCC
Confidence            788899999999986543322 2211  2234444333      2334445544443  5566543    2334455556


Q ss_pred             CccEEEEEEcCCCcEEEEEECCC--------eEEEEeCCCCceEEEEecCC-Ccc------EEEEEEcCCCCEEE-EEcC
Q psy17610        294 PSMIMSAAYHPSEVQLITCSTNK--------MIDYWETCDGSIIRSLEGSD-VAA------VNCVDFVDDGKYFL-TGGA  357 (515)
Q Consensus       294 ~~~~~~~~~~~~~~~l~~~~~~~--------~i~~~d~~~~~~~~~~~~~~-~~~------i~~~~~~~~~~~l~-~~~~  357 (515)
                      ++...++.+.+..+.++......        .+.-.|..+|.++...+... ...      -..+.-.++.++++ +|..
T Consensus       330 pG~cismqy~~~snh~l~tyRs~pn~p~~r~il~~~d~~dG~pVc~~r~~~~Gs~~~kl~t~~ai~~~~~nn~iv~~gd~  409 (463)
T KOG1645|consen  330 PGICISMQYHGVSNHLLLTYRSNPNFPQSRFILGRIDFRDGFPVCGKRRTYFGSKQTKLSTTQAIRAVEDNNYIVVVGDS  409 (463)
T ss_pred             CcceeeeeecCccceEEEEecCCCCCccceeeeeeeccccCceeeeecccccCCcccccccccceeccccccEEEEecCC
Confidence            67788888888777666654431        11122333444443322211 000      01122233445554 4556


Q ss_pred             CCeEEEEEccCCeeeeeccCCCCCeeEEEECC-C-CcEEEEEeCCCcEEEEeCC
Q psy17610        358 DQIVKMWMYREGVPCFVGIGHAASITKIKISP-D-KKVIVSVSADGGIFLWTFP  409 (515)
Q Consensus       358 dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~-~-~~~l~~~~~dg~i~iw~~~  409 (515)
                      .+.+.+||..+.+.+..+.- ..+|..+.... + +.+|++- .|..++||..+
T Consensus       410 tn~lil~D~~s~evvQ~l~~-~epv~Dicp~~~n~~syLa~L-Td~~v~Iyk~e  461 (463)
T KOG1645|consen  410 TNELILQDPHSFEVVQTLAL-SEPVLDICPNDTNGSSYLALL-TDDRVHIYKNE  461 (463)
T ss_pred             cceeEEeccchhheeeeccc-CcceeecceeecCCcchhhhe-ecceEEEEecC
Confidence            67899999999998888754 47788777654 3 3466655 55688888653

>KOG2066|consensus

Probab=98.89  E-value=3.8e-07  Score=85.61  Aligned_cols=142  Identities=13%  Similarity=0.112  Sum_probs=102.8

Q ss_pred             ecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCC-----CcEEEEEecCCcEEEEeCC--CCceeEEE
Q psy17610         90 NPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVN-----FSSVFATCSKNDIRIWSVR--TLNELLRI  162 (515)
Q Consensus        90 s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~-----~~~l~~~~~d~~i~iw~~~--~~~~~~~~  162 (515)
                      .-+|+++++|+.||+|.|-.+-++...... . ...++.+++++|+     .+++++++..| +.++.-.  ..+....+
T Consensus        80 ~~~Gey~asCS~DGkv~I~sl~~~~~~~~~-d-f~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l  156 (846)
T KOG2066|consen   80 ILEGEYVASCSDDGKVVIGSLFTDDEITQY-D-FKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVL  156 (846)
T ss_pred             ccCCceEEEecCCCcEEEeeccCCccceeE-e-cCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceee
Confidence            557999999999999999999886544432 2 5678999999998     46778888777 7776432  11112245


Q ss_pred             EecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCC-----eEEEEEcCCCCEEEEecCCCcEEEEE
Q psy17610        163 SVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRG-----VTALAITQDGTRLLSGGGEGQVRIWK  237 (515)
Q Consensus       163 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l~~~~~d~~i~iw~  237 (515)
                      ....++|.++.|.  |+++|-++.+| |++||..+++.+..++.++...     ...+.|.++. .|+.|-. .+|++..
T Consensus       157 ~~~eG~I~~i~W~--g~lIAWand~G-v~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~-~LVIGW~-d~v~i~~  231 (846)
T KOG2066|consen  157 SEGEGPIHSIKWR--GNLIAWANDDG-VKVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDED-RLVIGWG-DSVKICS  231 (846)
T ss_pred             ecCccceEEEEec--CcEEEEecCCC-cEEEeccccceeeccCCCCCCCCcccCCCceEecCCC-eEEEecC-CeEEEEE
Confidence            6677899999995  77888888887 9999999998887776555321     3456777655 4555544 4789988


Q ss_pred             cc
Q psy17610        238 LT  239 (515)
Q Consensus       238 ~~  239 (515)
                      ++
T Consensus       232 I~  233 (846)
T KOG2066|consen  232 IK  233 (846)
T ss_pred             Ee
Confidence            86

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=98.88  E-value=7.2e-09  Score=60.15  Aligned_cols=39  Identities=21%  Similarity=0.622  Sum_probs=36.6

Q ss_pred             CeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEEEEE
Q psy17610        473 GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICL  512 (515)
Q Consensus       473 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~  512 (515)
                      |+++.++.+|. .+|++++|+|++++|++++.|++|++||
T Consensus         1 g~~~~~~~~h~-~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    1 GKCVRTFRGHS-SSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEEESSS-SSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             CeEEEEEcCCC-CcEEEEEEecccccceeeCCCCEEEEEC
Confidence            46788999997 9999999999999999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=98.88  E-value=1e-05  Score=74.09  Aligned_cols=292  Identities=13%  Similarity=0.114  Sum_probs=156.9

Q ss_pred             ecCCCEEEEEe---------cCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeE
Q psy17610         90 NPVNNKVFVGT---------VNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELL  160 (515)
Q Consensus        90 s~~~~~l~~~~---------~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~  160 (515)
                      |||+++++...         ..+.+.++|++++ ....+.. ....+....|||+|+.++... ++.|.+++..+++.. 
T Consensus         1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~-~~~~l~~-~~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~-   76 (353)
T PF00930_consen    1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETG-EITPLTP-PPPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQET-   76 (353)
T ss_dssp             -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTT-EEEESS--EETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEE-
T ss_pred             CCCCCeEEEEECcEEeeeeccceeEEEEecCCC-ceEECcC-CccccccceeecCCCeeEEEe-cCceEEEECCCCCeE-
Confidence            68888888753         3468999999995 4444333 267899999999998888776 578999998877433 


Q ss_pred             EEEecC------------------eEEEEEEEeeCCCEEEEEeCC-CeEEEEecCCCceEEEecCCCC---CCeEEEEEc
Q psy17610        161 RISVMN------------------MICACIVFTYDGKAILSGWND-GFIRCFTPQSGKLKFIIPNAHN---RGVTALAIT  218 (515)
Q Consensus       161 ~~~~~~------------------~~v~~~~~~~~~~~l~~~~~d-g~i~~~~~~~~~~~~~~~~~~~---~~v~~~~~~  218 (515)
                      ++....                  +.-..+.||||+++|+....| ..+..+.+.      .. ....   ..+..+.+-
T Consensus        77 ~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~------~~-~~~~~~yp~~~~~~YP  149 (353)
T PF00930_consen   77 QLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLP------DY-SPPDSQYPEVESIRYP  149 (353)
T ss_dssp             ESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEE------EE-SSSTESS-EEEEEE--
T ss_pred             EeccccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEee------cc-CCccccCCcccccccC
Confidence            222111                  112568899999999876543 333333211      01 1111   123444443


Q ss_pred             CCCCEEEEecCCCcEEEEEccCCceeeEEee---ccccCceEEEEEecCCCEEEEEe--CC---CcEEEEEcccceEEEE
Q psy17610        219 QDGTRLLSGGGEGQVRIWKLTRESQSLQCVL---KEHTSSVSVIQIKSDSKEAMSAS--TD---GTCVLWDLIKSTRLII  290 (515)
Q Consensus       219 ~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~--~d---~~i~iwd~~~~~~~~~  290 (515)
                      .-|.-...    -.+.++|+..++.......   ......+..+.|.++++.++..-  .+   ..+.+.|..++.....
T Consensus       150 k~G~~np~----v~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~  225 (353)
T PF00930_consen  150 KAGDPNPR----VSLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVV  225 (353)
T ss_dssp             BTTS---E----EEEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEE
T ss_pred             CCCCcCCc----eEEEEEECCCCcEEEeeeccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEE
Confidence            22221111    1355677754443322222   23455688999999988444433  22   2466677766544333


Q ss_pred             EE--cCcc---EEEEEEc-CCCcEEE-EEECCC--eEEEEeCCCCceEEEEecCCCccEE-EEEEcCCCCEEE-EEcCC-
Q psy17610        291 MI--LPSM---IMSAAYH-PSEVQLI-TCSTNK--MIDYWETCDGSIIRSLEGSDVAAVN-CVDFVDDGKYFL-TGGAD-  358 (515)
Q Consensus       291 ~~--~~~~---~~~~~~~-~~~~~l~-~~~~~~--~i~~~d~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~l~-~~~~d-  358 (515)
                      ..  .+..   .....+. +++..++ ....+|  .|.+++...+.. ..+.... -.|. -+.++++++.++ ++..+ 
T Consensus       226 ~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~~~-~~lT~G~-~~V~~i~~~d~~~~~iyf~a~~~~  303 (353)
T PF00930_consen  226 LEETSDGWVDVYDPPHFLGPDGNEFLWISERDGYRHLYLYDLDGGKP-RQLTSGD-WEVTSILGWDEDNNRIYFTANGDN  303 (353)
T ss_dssp             EEEESSSSSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEETTSSEE-EESS-SS-S-EEEEEEEECTSSEEEEEESSGG
T ss_pred             EEecCCcceeeecccccccCCCCEEEEEEEcCCCcEEEEEcccccce-eccccCc-eeecccceEcCCCCEEEEEecCCC
Confidence            32  2221   2234443 6555444 444555  466667666653 3443333 4564 467888766554 55442 


Q ss_pred             ---CeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEe
Q psy17610        359 ---QIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVS  398 (515)
Q Consensus       359 ---g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~  398 (515)
                         ..+...++..+.....+......-..+.|||++++++...
T Consensus       304 p~~r~lY~v~~~~~~~~~~LT~~~~~~~~~~~Spdg~y~v~~~  346 (353)
T PF00930_consen  304 PGERHLYRVSLDSGGEPKCLTCEDGDHYSASFSPDGKYYVDTY  346 (353)
T ss_dssp             TTSBEEEEEETTETTEEEESSTTSSTTEEEEE-TTSSEEEEEE
T ss_pred             CCceEEEEEEeCCCCCeEeccCCCCCceEEEECCCCCEEEEEE
Confidence               3566666762333444443333336899999999887553

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=98.88  E-value=2.5e-05  Score=74.92  Aligned_cols=243  Identities=13%  Similarity=0.149  Sum_probs=143.6

Q ss_pred             CCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCC---CCcEEEEEec------CCcEEEEeCCCCceeEEEE
Q psy17610         93 NNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPV---NFSSVFATCS------KNDIRIWSVRTLNELLRIS  163 (515)
Q Consensus        93 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~---~~~~l~~~~~------d~~i~iw~~~~~~~~~~~~  163 (515)
                      +..+++++.++.+.-.|.++|+.+-.........-..+.-+|   ++ .++++..      ++.|.-+|.++|+.+.++.
T Consensus       120 ~~~v~v~t~dg~l~ALDa~TGk~~W~~~~~~~~~~~~~tssP~v~~g-~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~  198 (527)
T TIGR03075       120 DGKVFFGTLDARLVALDAKTGKVVWSKKNGDYKAGYTITAAPLVVKG-KVITGISGGEFGVRGYVTAYDAKTGKLVWRRY  198 (527)
T ss_pred             CCEEEEEcCCCEEEEEECCCCCEEeecccccccccccccCCcEEECC-EEEEeecccccCCCcEEEEEECCCCceeEecc
Confidence            446777888999999999998776554321111001111122   33 5555543      6789999999999887654


Q ss_pred             ecCe-------------------------------EE-EEEEEeeCCCEEEEEeCC-----C-----------eEEEEec
Q psy17610        164 VMNM-------------------------------IC-ACIVFTYDGKAILSGWND-----G-----------FIRCFTP  195 (515)
Q Consensus       164 ~~~~-------------------------------~v-~~~~~~~~~~~l~~~~~d-----g-----------~i~~~~~  195 (515)
                      .-..                               .+ ..+++.|+..++..+..+     +           .|.-.|+
T Consensus       199 ~~p~~~~~~~~~~~~~~~~~~~~tw~~~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~  278 (527)
T TIGR03075       199 TVPGDMGYLDKADKPVGGEPGAKTWPGDAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDP  278 (527)
T ss_pred             CcCCCcccccccccccccccccCCCCCCccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEcc
Confidence            2211                               11 134566666666665421     1           6778899


Q ss_pred             CCCceEEEecCCCC--------CCeEEEEEcCCCC---EEEEecCCCcEEEEEccCCceeeE------Eee----cccc-
Q psy17610        196 QSGKLKFIIPNAHN--------RGVTALAITQDGT---RLLSGGGEGQVRIWKLTRESQSLQ------CVL----KEHT-  253 (515)
Q Consensus       196 ~~~~~~~~~~~~~~--------~~v~~~~~~~~~~---~l~~~~~d~~i~iw~~~~~~~~~~------~~~----~~~~-  253 (515)
                      ++|+....+...|.        ....-+....+|+   .++.+..+|.+.+.|..+.+....      ...    .... 
T Consensus       279 ~TG~~~W~~Q~~~~D~wD~d~~~~p~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i~~~~~~~~~~w~~~~~~~~g  358 (527)
T TIGR03075       279 DTGKIKWHYQTTPHDEWDYDGVNEMILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLLSAEPFVDTVNWATGVDLKTG  358 (527)
T ss_pred             ccCCEEEeeeCCCCCCccccCCCCcEEEEeccCCcEEEEEEEeCCCceEEEEECCCCceeccccccCCcccccccCCCCC
Confidence            99999877643221        1122233334665   777899999999999865432100      000    0000 


Q ss_pred             Cce----------------------------EEEEEecCCCEEEEEeC--------------------------------
Q psy17610        254 SSV----------------------------SVIQIKSDSKEAMSAST--------------------------------  273 (515)
Q Consensus       254 ~~v----------------------------~~~~~~~~~~~l~~~~~--------------------------------  273 (515)
                      .++                            ..++++|+..+++....                                
T Consensus       359 ~p~~~~~~~~~~~~~~~~~~~~Pg~~Gg~~W~~~A~Dp~~g~~yvp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~  438 (527)
T TIGR03075       359 RPIEVPEARSADGKKGKPVGVCPGFLGGKNWQPMAYSPKTGLFYVPANEVCMDYEPEKVSYKKGAAYLGAGLTIKPPPDD  438 (527)
T ss_pred             CCccChhhCcCCCCCCCeeEECCCCcCCCCCCCceECCCCCEEEEecccccccccccccccCCCCceeccccccCCCCCC
Confidence            000                            11455555544443222                                


Q ss_pred             -CCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCC
Q psy17610        274 -DGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSD  336 (515)
Q Consensus       274 -d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~  336 (515)
                       -|.+.-+|+.+++..-......+...-.+.-.+..++.+..+|.++.+|.++|+.+.+.+...
T Consensus       439 ~~g~l~AiD~~tGk~~W~~~~~~p~~~~~l~t~g~lvf~g~~~G~l~a~D~~TGe~lw~~~~g~  502 (527)
T TIGR03075       439 HMGSLIAWDPITGKIVWEHKEDFPLWGGVLATAGDLVFYGTLEGYFKAFDAKTGEELWKFKTGS  502 (527)
T ss_pred             CceeEEEEeCCCCceeeEecCCCCCCCcceEECCcEEEEECCCCeEEEEECCCCCEeEEEeCCC
Confidence             245788888888887776655432222222345567778889999999999999999887653

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>KOG3617|consensus

Probab=98.87  E-value=1e-07  Score=89.69  Aligned_cols=317  Identities=13%  Similarity=0.085  Sum_probs=178.5

Q ss_pred             EEEEEeeCCCEEEEEeC----CCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceee
Q psy17610        170 ACIVFTYDGKAILSGWN----DGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSL  245 (515)
Q Consensus       170 ~~~~~~~~~~~l~~~~~----dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~  245 (515)
                      +-..|+|...++++++.    .|.|.||- ++|++....  ...-.+++++|+|..-.|+.|-.-|.+.+|..  +..+.
T Consensus        19 ti~SWHPsePlfAVA~fS~er~GSVtIfa-dtGEPqr~V--t~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~--~~~e~   93 (1416)
T KOG3617|consen   19 TISSWHPSEPLFAVASFSPERGGSVTIFA-DTGEPQRDV--TYPVHATSLCWHPEEFVLAQGWEMGVSDVQKT--NTTET   93 (1416)
T ss_pred             cccccCCCCceeEEEEecCCCCceEEEEe-cCCCCCccc--ccceehhhhccChHHHHHhhccccceeEEEec--CCcee
Confidence            44679999998888764    57888884 566654433  12234578999998888889988999999997  44455


Q ss_pred             EEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEE-----EcCcc--EEEEEEcCCCcE------EEEE
Q psy17610        246 QCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIM-----ILPSM--IMSAAYHPSEVQ------LITC  312 (515)
Q Consensus       246 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-----~~~~~--~~~~~~~~~~~~------l~~~  312 (515)
                      ......|..+|..+.|+++|..++++..-|.+.+|....-..++..     .....  ..+..+++++.-      .++.
T Consensus        94 htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d~~g~~q~~~~~~hel~~~ltl~cfRL~~~~Ee~~~laKaaVt  173 (1416)
T KOG3617|consen   94 HTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYDVIGEIQTSNIMQHELNDQLTLWCFRLSYDREEKFKLAKAAVT  173 (1416)
T ss_pred             eeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEeeeccccccchhhhhHhhceeeEEEEecCCChHHhhhhhhhhcc
Confidence            5566789999999999999999999999999999987532222111     11222  333444555321      2222


Q ss_pred             ECCCeEE-EEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCC
Q psy17610        313 STNKMID-YWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDK  391 (515)
Q Consensus       313 ~~~~~i~-~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~  391 (515)
                      +.+..+- .++-+.....+...         -.-.|+|..++.++.+|+|+-.|- .|+........+  --.+-|.+..
T Consensus       174 gDe~alD~~fnwk~~~a~rs~~---------ksgv~~g~~F~~~~~~GtVyyvdq-~g~~~~V~k~dS--~vQmLf~~~~  241 (1416)
T KOG3617|consen  174 GDESALDEPFNWKESLAERSDE---------KSGVPKGTEFLFAGKSGTVYYVDQ-NGRQRTVHKLDS--EVQMLFMGYC  241 (1416)
T ss_pred             CchhhhcccccCccchhhcccc---------ccCCCCCcEEEEEcCCceEEEEcC-CCcEEEEEEccc--hHHHHHhccc
Confidence            2222221 22111100000000         012467888888899999887774 333333221111  1234444444


Q ss_pred             cEEEEEeCCCcEEEEeCCCCcCc-cCCCcccceeeec-----------ccccccceeeecCcccEEEeeeccCCcEEEEe
Q psy17610        392 KVIVSVSADGGIFLWTFPELEDD-VGDSRSLSSKISR-----------STARSTRLIIMILPSMIMSAAYHPSEVQLITC  459 (515)
Q Consensus       392 ~~l~~~~~dg~i~iw~~~~~~~~-~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~  459 (515)
                      .-++..-.+-++.++-+...... .........+...           .........-......+++++++..+..|..|
T Consensus       242 eai~~i~e~lr~~l~~v~~~G~~ee~~~vk~sgk~GgrqGgiA~sEssGvLr~~eKyg~e~ge~~~c~cY~~~~~~l~ag  321 (1416)
T KOG3617|consen  242 EAISIIIEFLRDCLIFVLAKGTSEERCAVKVSGKLGGRQGGIACSESSGVLRKSEKYGLELGEGILCMCYGEKEIRLWAG  321 (1416)
T ss_pred             ceEEEEeeeceeeEEEecCCCchHHhhhhhhccccCCccCccccccccccccCCcchhhhcCCceEEEEEeccceEEEec
Confidence            44444444444444433221100 0000000000000           00011111122234569999999999999999


Q ss_pred             ecCCeEEEEecCCC-------eeeeeeccc--ccceEEEEEEcCCCcEEEEee
Q psy17610        460 STNKMIDYWETCDG-------SIIRSLEGS--DVAAVNCVDFVDDGKYFLTGG  503 (515)
Q Consensus       460 ~~dg~v~iwd~~~~-------~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~~  503 (515)
                      ...|.+.+|--...       +-...+.+.  ..+.|+.+.|.|-...++.-+
T Consensus       322 t~~gnv~~w~~v~~~f~g~p~~d~w~l~~~~e~~g~I~~i~Wg~~k~~~avn~  374 (1416)
T KOG3617|consen  322 TKEGNVTIWLDVNKGFQGDPTIDVWTLNGKRESLGKISLIRWGPIKSTAAVNT  374 (1416)
T ss_pred             ccCCcEEEeeecCccccCCCCcceEEecCchhhccceEEEEeccccchhhhhh
Confidence            99999999963321       122233322  126799999998655544433

>KOG3621|consensus

Probab=98.86  E-value=7.1e-07  Score=82.70  Aligned_cols=138  Identities=11%  Similarity=0.052  Sum_probs=101.8

Q ss_pred             CCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCcee
Q psy17610         80 DDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNEL  159 (515)
Q Consensus        80 ~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~  159 (515)
                      |...|.--+++..+++++.|+.-|.+++|+-..++.......+-.+.+..+..+++..++++++..|.|.++-+..+.+.
T Consensus        32 ~~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~  111 (726)
T KOG3621|consen   32 FPARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPR  111 (726)
T ss_pred             CcceEEEEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCC
Confidence            45556666677789999999999999999999876655555555566777788988877888888999999988764321


Q ss_pred             EE-----E-EecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCc----eEEEecCCCCCCeEEEEEc
Q psy17610        160 LR-----I-SVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGK----LKFIIPNAHNRGVTALAIT  218 (515)
Q Consensus       160 ~~-----~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~----~~~~~~~~~~~~v~~~~~~  218 (515)
                      ..     . ..|...|++++|++++..+++|...|+|.+-.+.+..    ....+ ......|.-+.+.
T Consensus       112 ~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s~~~~~~~~q~i-l~~ds~IVQlD~~  179 (726)
T KOG3621|consen  112 DLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDSRQAFLSKSQEI-LSEDSEIVQLDYL  179 (726)
T ss_pred             cceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEechhhhhcccccee-eccCcceEEeecc
Confidence            11     1 1367789999999999999999999999998887721    11122 2345667666665

>KOG1832|consensus

Probab=98.85  E-value=1.8e-09  Score=101.64  Aligned_cols=220  Identities=13%  Similarity=0.222  Sum_probs=161.1

Q ss_pred             ceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCC--cEE
Q psy17610        157 NELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEG--QVR  234 (515)
Q Consensus       157 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~  234 (515)
                      +..+.+..++...+|++|+-+.++|++|+..|.|+++++.+|...... ..|..+|+-+.-+.+|..+++.+.-.  ...
T Consensus      1092 r~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~-ncH~SavT~vePs~dgs~~Ltsss~S~Plsa 1170 (1516)
T KOG1832|consen 1092 RSWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESV-NCHQSAVTLVEPSVDGSTQLTSSSSSSPLSA 1170 (1516)
T ss_pred             ccchhhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccc-cccccccccccccCCcceeeeeccccCchHH
Confidence            344556677888999999999999999999999999999999998887 79999999999999998887665432  577


Q ss_pred             EEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC-----ccEEEEEEcCCCcEE
Q psy17610        235 IWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP-----SMIMSAAYHPSEVQL  309 (515)
Q Consensus       235 iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l  309 (515)
                      +|++.. .....+.+.    .-.++.|+.....-+.|.......+||+.++.++..+..+     ..-....|+|+...+
T Consensus      1171 LW~~~s-~~~~~Hsf~----ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~D~LI 1245 (1516)
T KOG1832|consen 1171 LWDASS-TGGPRHSFD----EDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPCDTLI 1245 (1516)
T ss_pred             Hhcccc-ccCcccccc----ccceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCCCcceE
Confidence            899863 333444433    2356777766554455555567899999998877664332     134677899988877


Q ss_pred             EEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECC
Q psy17610        310 ITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISP  389 (515)
Q Consensus       310 ~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~  389 (515)
                      +   .||  .+||.+..+.++.+....  .-..-.|+|.|.-++.-++     |||+++.+.+...+.-  .-..+.|+.
T Consensus      1246 l---ndG--vLWDvR~~~aIh~FD~ft--~~~~G~FHP~g~eVIINSE-----IwD~RTF~lLh~VP~L--dqc~VtFNs 1311 (1516)
T KOG1832|consen 1246 L---NDG--VLWDVRIPEAIHRFDQFT--DYGGGGFHPSGNEVIINSE-----IWDMRTFKLLHSVPSL--DQCAVTFNS 1311 (1516)
T ss_pred             e---eCc--eeeeeccHHHHhhhhhhe--ecccccccCCCceEEeech-----hhhhHHHHHHhcCccc--cceEEEecc
Confidence            6   344  479999988887776542  2223469999998888764     8999998777655332  235677887


Q ss_pred             CCcEEEE
Q psy17610        390 DKKVIVS  396 (515)
Q Consensus       390 ~~~~l~~  396 (515)
                      .|..+..
T Consensus      1312 tG~VmYa 1318 (1516)
T KOG1832|consen 1312 TGDVMYA 1318 (1516)
T ss_pred             Cccchhh
Confidence            7775543

>KOG1645|consensus

Probab=98.84  E-value=1.7e-07  Score=80.56  Aligned_cols=256  Identities=13%  Similarity=0.080  Sum_probs=148.3

Q ss_pred             EEEEECCCCceeEEeeccCccCeEEEEeCCCCc-EEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCC-CEEE
Q psy17610        105 IFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFS-SVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDG-KAIL  182 (515)
Q Consensus       105 i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~  182 (515)
                      ++..+..+- +...++.+|...|.+++|||... .+..++.++.|+|.|+++...+..+..+ ..+++++|.-|. .++.
T Consensus       175 v~~l~~~~f-kssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IY  252 (463)
T KOG1645|consen  175 VQKLESHDF-KSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIY  252 (463)
T ss_pred             eEEeccCCc-chhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeE
Confidence            444444442 22336677889999999999876 5677777999999999999888888877 678899998766 4677


Q ss_pred             EEeCCCeEEEEecCCCceEEEecC--CCCCCeEEEEE------cCCCCEEEEecCCCcEEEEEccCCceeeEEeec-ccc
Q psy17610        183 SGWNDGFIRCFTPQSGKLKFIIPN--AHNRGVTALAI------TQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLK-EHT  253 (515)
Q Consensus       183 ~~~~dg~i~~~~~~~~~~~~~~~~--~~~~~v~~~~~------~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-~~~  253 (515)
                      .|...|.|.+||++..+-......  -...+|..++.      .+.|.+++....+  +..|++..........++ +..
T Consensus       253 aGl~nG~VlvyD~R~~~~~~~e~~a~~t~~pv~~i~~~~~n~~f~~gglLv~~lt~--l~f~ei~~s~~~~p~vlele~p  330 (463)
T KOG1645|consen  253 AGLQNGMVLVYDMRQPEGPLMELVANVTINPVHKIAPVQPNKIFTSGGLLVFALTV--LQFYEIVFSAECLPCVLELEPP  330 (463)
T ss_pred             EeccCceEEEEEccCCCchHhhhhhhhccCcceeecccCccccccccceEEeeehh--hhhhhhhccccCCCcccccCCC
Confidence            888899999999986543211111  12233444333      2334445444432  566776533333332222 224


Q ss_pred             CceEEEEEecCCCEEEEEeCCC-------cEE-EEEcccceEEEEEEc---Ccc------EEEEEEcCCCcEEE-EEECC
Q psy17610        254 SSVSVIQIKSDSKEAMSASTDG-------TCV-LWDLIKSTRLIIMIL---PSM------IMSAAYHPSEVQLI-TCSTN  315 (515)
Q Consensus       254 ~~v~~~~~~~~~~~l~~~~~d~-------~i~-iwd~~~~~~~~~~~~---~~~------~~~~~~~~~~~~l~-~~~~~  315 (515)
                      +...++++.+..+.++......       .+- --|...+..+.....   .+.      -..+.-.++.++++ ++...
T Consensus       331 G~cismqy~~~snh~l~tyRs~pn~p~~r~il~~~d~~dG~pVc~~r~~~~Gs~~~kl~t~~ai~~~~~nn~iv~~gd~t  410 (463)
T KOG1645|consen  331 GICISMQYHGVSNHLLLTYRSNPNFPQSRFILGRIDFRDGFPVCGKRRTYFGSKQTKLSTTQAIRAVEDNNYIVVVGDST  410 (463)
T ss_pred             cceeeeeecCccceEEEEecCCCCCccceeeeeeeccccCceeeeecccccCCcccccccccceeccccccEEEEecCCc
Confidence            4555666666545544433220       000 011122222111110   000      01111233445544 34456


Q ss_pred             CeEEEEeCCCCceEEEEecCCCccEEEEEEcC-C-CCEEEEEcCCCeEEEEEcc
Q psy17610        316 KMIDYWETCDGSIIRSLEGSDVAAVNCVDFVD-D-GKYFLTGGADQIVKMWMYR  367 (515)
Q Consensus       316 ~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~-~-~~~l~~~~~dg~i~i~d~~  367 (515)
                      ..+.+||..+.+.+.++...  .++..+.... + +.+|++-. |..++||..+
T Consensus       411 n~lil~D~~s~evvQ~l~~~--epv~Dicp~~~n~~syLa~LT-d~~v~Iyk~e  461 (463)
T KOG1645|consen  411 NELILQDPHSFEVVQTLALS--EPVLDICPNDTNGSSYLALLT-DDRVHIYKNE  461 (463)
T ss_pred             ceeEEeccchhheeeecccC--cceeecceeecCCcchhhhee-cceEEEEecC
Confidence            78999999999999998876  5777666544 3 34555554 5578887654

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=98.84  E-value=2.6e-05  Score=69.05  Aligned_cols=274  Identities=14%  Similarity=0.139  Sum_probs=141.0

Q ss_pred             EEecCCCEEEEEec---CceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEe
Q psy17610         88 QYNPVNNKVFVGTV---NCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISV  164 (515)
Q Consensus        88 ~~s~~~~~l~~~~~---d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~  164 (515)
                      +|.+||+.|+.++.   ...+++.|+++++..+.+...+ .......++|+.+.++.......++--|+++.+....+..
T Consensus        42 ~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g-~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~~~vy~~  120 (386)
T PF14583_consen   42 CFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPG-DNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEERVVYEV  120 (386)
T ss_dssp             -B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS--B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--EEEEEE-
T ss_pred             CcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCC-CCccceEEecCCCeEEEEECCCeEEEEECCcCcEEEEEEC
Confidence            67889987777665   4568888999965554443222 3333566788888888777778899999999887777777


Q ss_pred             cCeEEEEEEEee--CCCEEEEEeC----------------------CCeEEEEecCCCceEEEecCCCCCCeEEEEEcCC
Q psy17610        165 MNMICACIVFTY--DGKAILSGWN----------------------DGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQD  220 (515)
Q Consensus       165 ~~~~v~~~~~~~--~~~~l~~~~~----------------------dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  220 (515)
                      +...+....|..  |+..++..-.                      ...|.-.|+.+|+....+  ....-+..+.|+|.
T Consensus       121 p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~~~v~--~~~~wlgH~~fsP~  198 (386)
T PF14583_consen  121 PDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGERKVVF--EDTDWLGHVQFSPT  198 (386)
T ss_dssp             -TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT--EEEEE--EESS-EEEEEEETT
T ss_pred             CcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCceeEEE--ecCccccCcccCCC
Confidence            777666566653  4555443211                      134666688888765554  34556788999994


Q ss_pred             C-CEEEEec---CCC-cEEEEEccCCceeeEEeecccc--CceEEEEEecCCCEEEEEeC-----CCcEEEEEcccceEE
Q psy17610        221 G-TRLLSGG---GEG-QVRIWKLTRESQSLQCVLKEHT--SSVSVIQIKSDSKEAMSAST-----DGTCVLWDLIKSTRL  288 (515)
Q Consensus       221 ~-~~l~~~~---~d~-~i~iw~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~-----d~~i~iwd~~~~~~~  288 (515)
                      . ..|..|-   .+. .-+||-++....... .+..+.  ..+.-=-|.|||..+..-+.     +..|.-+|+.+++..
T Consensus       199 dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~-~v~~~~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~~~~  277 (386)
T PF14583_consen  199 DPTLIMFCHEGPWDLVDQRIWTINTDGSNVK-KVHRRMEGESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDTGERR  277 (386)
T ss_dssp             EEEEEEEEE-S-TTTSS-SEEEEETTS---E-ESS---TTEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT--EE
T ss_pred             CCCEEEEeccCCcceeceEEEEEEcCCCcce-eeecCCCCcccccccccCCCCEEEEEeecCCCCceEEEeeCCCCCCce
Confidence            4 4444432   222 236776654332222 222222  22333457889988765332     446777888888765


Q ss_pred             EEEEcCccEEEEEEcCCCcEEEEEECC----------------CeEEEEeCCCCceEEEEe---------cCCCccEEEE
Q psy17610        289 IIMILPSMIMSAAYHPSEVQLITCSTN----------------KMIDYWETCDGSIIRSLE---------GSDVAAVNCV  343 (515)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~l~~~~~~----------------~~i~~~d~~~~~~~~~~~---------~~~~~~i~~~  343 (515)
                      .....+ .......++++++++-=+.|                .-|++++...+.......         ++....-...
T Consensus       278 ~~~~~p-~~~H~~ss~Dg~L~vGDG~d~p~~v~~~~~~~~~~~p~i~~~~~~~~~~~~l~~h~~sw~v~~~~~q~~hPhp  356 (386)
T PF14583_consen  278 RLMEMP-WCSHFMSSPDGKLFVGDGGDAPVDVADAGGYKIENDPWIYLFDVEAGRFRKLARHDTSWKVLDGDRQVTHPHP  356 (386)
T ss_dssp             EEEEE--SEEEEEE-TTSSEEEEEE-------------------EEEEEETTTTEEEEEEE-------BTTBSSTT----
T ss_pred             EEEeCC-ceeeeEEcCCCCEEEecCCCCCccccccccceecCCcEEEEeccccCceeeeeeccCcceeecCCCccCCCCC
Confidence            544444 45566778899888753333                146677887665432111         1111112357


Q ss_pred             EEcCCCCEEEEE-cCCCeEEEEEc
Q psy17610        344 DFVDDGKYFLTG-GADQIVKMWMY  366 (515)
Q Consensus       344 ~~~~~~~~l~~~-~~dg~i~i~d~  366 (515)
                      .|+|||++++.. ...|...||-+
T Consensus       357 ~FSPDgk~VlF~Sd~~G~~~vY~v  380 (386)
T PF14583_consen  357 SFSPDGKWVLFRSDMEGPPAVYLV  380 (386)
T ss_dssp             EE-TTSSEEEEEE-TTSS-EEEEE
T ss_pred             ccCCCCCEEEEECCCCCCccEEEE
Confidence            899999987654 45666666543

>KOG1275|consensus

Probab=98.83  E-value=1.7e-07  Score=89.02  Aligned_cols=182  Identities=12%  Similarity=0.104  Sum_probs=133.0

Q ss_pred             CCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeE
Q psy17610        305 SEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITK  384 (515)
Q Consensus       305 ~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~  384 (515)
                      ++..++.|+....+..+|+++.+..+...... ..+.-|.  .+++++.+|...|+|.+-|.++.+.+.++..|++.|..
T Consensus       146 ~~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a-~~v~imR--~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSD  222 (1118)
T KOG1275|consen  146 GPSTLIMGGLQEKLIHIDLNTEKETRTTNVSA-SGVTIMR--YNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISD  222 (1118)
T ss_pred             CCcceeecchhhheeeeecccceeeeeeeccC-CceEEEE--ecCcEEEeecccceEEeecCCcCceeeeeeccccceee
Confidence            45667788888888899999988877776554 3444444  46889999999999999999999999999999999987


Q ss_pred             EEECCCCcEEEEEeC---------CCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCC-c
Q psy17610        385 IKISPDKKVIVSVSA---------DGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSE-V  454 (515)
Q Consensus       385 ~~~~~~~~~l~~~~~---------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~-~  454 (515)
                      +..  .|+.|++++.         |..|++||++............                     ...-+.|.|.- .
T Consensus       223 fDv--~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~---------------------~P~flrf~Psl~t  279 (1118)
T KOG1275|consen  223 FDV--QGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPY---------------------GPQFLRFHPSLTT  279 (1118)
T ss_pred             eec--cCCeEEEeecccccccccccchhhhhhhhhhhccCCccccc---------------------Cchhhhhcccccc
Confidence            766  6889999885         4568999998754221111110                     01234566653 4


Q ss_pred             EEEEeecCCeEEEEecCC---CeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEEEEE
Q psy17610        455 QLITCSTNKMIDYWETCD---GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICL  512 (515)
Q Consensus       455 ~l~~~~~dg~v~iwd~~~---~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~  512 (515)
                      .+++++..|...+-|..+   ...-........+.+..+++|++|+.|+.|..+|.|.+|.
T Consensus       280 ~~~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa  340 (1118)
T KOG1275|consen  280 RLAVTSQSGQFQFVDTATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWA  340 (1118)
T ss_pred             eEEEEecccceeeccccccCCCccceeEEccCCCcceeEEecCCCceEEEecccCcEeeec
Confidence            678888899999998432   2111112222225599999999999999999999999994

>KOG2114|consensus

Probab=98.82  E-value=2.3e-06  Score=81.19  Aligned_cols=192  Identities=17%  Similarity=0.169  Sum_probs=132.9

Q ss_pred             EEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCc-eEEEEEecCCCEEEEEeCCCc-----EEEEEcccc----
Q psy17610        216 AITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSS-VSVIQIKSDSKEAMSASTDGT-----CVLWDLIKS----  285 (515)
Q Consensus       216 ~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~d~~-----i~iwd~~~~----  285 (515)
                      +|++.+..++.|+.+|.|.+.+-   .......+..+... |..+....+..+|++.++|+.     +++|+++..    
T Consensus        30 c~~s~~~~vvigt~~G~V~~Ln~---s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~  106 (933)
T KOG2114|consen   30 CCSSSTGSVVIGTADGRVVILNS---SFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNN  106 (933)
T ss_pred             EEcCCCceEEEeeccccEEEecc---cceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCC
Confidence            56778889999999999988884   45555667777666 555544445568888877654     899998643    


Q ss_pred             --eEE---EEEE-----cCccEEEEEEcCCCcEEEEEECCCeEEEEeC---CCCceEEEEecCCCccEEEEEEcCCCCEE
Q psy17610        286 --TRL---IIMI-----LPSMIMSAAYHPSEVQLITCSTNKMIDYWET---CDGSIIRSLEGSDVAAVNCVDFVDDGKYF  352 (515)
Q Consensus       286 --~~~---~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~l  352 (515)
                        .+.   ..+.     .+.++.+++.+.+-+.+++|..+|.|..+.-   +.......+......+|+.+++..+++.+
T Consensus       107 sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s~  186 (933)
T KOG2114|consen  107 SPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKSV  186 (933)
T ss_pred             CcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCcee
Confidence              222   2222     2357889999999999999999999998842   11111222333344899999999988873


Q ss_pred             EEEcCCCeEEEEEccCCee-eeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCC
Q psy17610        353 LTGGADQIVKMWMYREGVP-CFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPEL  411 (515)
Q Consensus       353 ~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  411 (515)
                      +....-..|.+|.+....+ ...+..|..++.|..+++....+++++. ..+.+|+.+..
T Consensus       187 lFv~Tt~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca~~-e~l~fY~sd~~  245 (933)
T KOG2114|consen  187 LFVATTEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICAGS-EFLYFYDSDGR  245 (933)
T ss_pred             EEEEecceeEEEEecCCCcceeeeccCCccceeeecCCCCccEEEecC-ceEEEEcCCCc
Confidence            3233345799999874442 4447788889999999986665665544 47999987643

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=98.81  E-value=6.1e-06  Score=75.53  Aligned_cols=232  Identities=10%  Similarity=0.111  Sum_probs=131.7

Q ss_pred             CCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccC----------------ccCeEEEEeCCCCcEEEEEec
Q psy17610         81 DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCH----------------TSAIYDLQFPVNFSSVFATCS  144 (515)
Q Consensus        81 ~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h----------------~~~v~~~~~~~~~~~l~~~~~  144 (515)
                      ...+....|||+|+.+|... ++.|++++..++.....+..|-                -+.-..+.||||+++|+....
T Consensus        42 ~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~  120 (353)
T PF00930_consen   42 PPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRF  120 (353)
T ss_dssp             ETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEE
T ss_pred             ccccccceeecCCCeeEEEe-cCceEEEECCCCCeEEeccccceeEEcCccceeccccccccccceEECCCCCEEEEEEE
Confidence            56788899999999999875 5689999998875444444330                112356889999999887654


Q ss_pred             C-Cc-----------------------------------EEEEeCCCCceeE-EEE----ecCeEEEEEEEeeCCCEEEE
Q psy17610        145 K-ND-----------------------------------IRIWSVRTLNELL-RIS----VMNMICACIVFTYDGKAILS  183 (515)
Q Consensus       145 d-~~-----------------------------------i~iw~~~~~~~~~-~~~----~~~~~v~~~~~~~~~~~l~~  183 (515)
                      | ..                                   +.|+|+.+++... ...    .....+..+.|.++++.|+.
T Consensus       121 d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~  200 (353)
T PF00930_consen  121 DEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRVSLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDGKRLWV  200 (353)
T ss_dssp             E-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EEEEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETTEEEEE
T ss_pred             CCcCCceEEeeccCCccccCCcccccccCCCCCcCCceEEEEEECCCCcEEEeeeccccCCCccCcccceecCCCcEEEE
Confidence            2 22                                   2234444443321 111    13445788999999984544


Q ss_pred             Ee--CC---CeEEEEecCCCceEEEecCCCCCC---eEEEEEc-CCCC-EEEEecCCCcEEEEEccCCceeeEEeecccc
Q psy17610        184 GW--ND---GFIRCFTPQSGKLKFIIPNAHNRG---VTALAIT-QDGT-RLLSGGGEGQVRIWKLTRESQSLQCVLKEHT  253 (515)
Q Consensus       184 ~~--~d---g~i~~~~~~~~~~~~~~~~~~~~~---v~~~~~~-~~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~  253 (515)
                      ..  ++   ..+.+.|..+++............   -....+. +++. ++.....+|.-+||-++....... .+....
T Consensus       201 ~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~~~~-~lT~G~  279 (353)
T PF00930_consen  201 QWLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDGYRHLYLYDLDGGKPR-QLTSGD  279 (353)
T ss_dssp             EEEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEETTSSEEE-ESS-SS
T ss_pred             EEcccCCCEEEEEEEECCCCceeEEEEecCCcceeeecccccccCCCCEEEEEEEcCCCcEEEEEccccccee-ccccCc
Confidence            32  22   246677887776544332222222   2345554 5554 444555777666666554444333 444444


Q ss_pred             CceE-EEEEecCCCEEEE-EeCC----CcEEEEEcccceEEEEEEcCccE-EEEEEcCCCcEEEEEEC
Q psy17610        254 SSVS-VIQIKSDSKEAMS-ASTD----GTCVLWDLIKSTRLIIMILPSMI-MSAAYHPSEVQLITCST  314 (515)
Q Consensus       254 ~~v~-~~~~~~~~~~l~~-~~~d----~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~  314 (515)
                      -.|. .+.++++++.++. +..+    ..+..-++..+.....+...... ..+.|+|++++++..+.
T Consensus       280 ~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~~~~LT~~~~~~~~~~~Spdg~y~v~~~s  347 (353)
T PF00930_consen  280 WEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSGGEPKCLTCEDGDHYSASFSPDGKYYVDTYS  347 (353)
T ss_dssp             S-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTETTEEEESSTTSSTTEEEEE-TTSSEEEEEEE
T ss_pred             eeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCCCCeEeccCCCCCceEEEECCCCCEEEEEEc
Confidence            5564 4677888777654 4432    24555566623344444443333 58999999999886543

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>KOG2114|consensus

Probab=98.81  E-value=2.8e-06  Score=80.60  Aligned_cols=201  Identities=17%  Similarity=0.268  Sum_probs=136.6

Q ss_pred             cEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccC-eEEEEeCCCCcEEEEEecCC-----cEEEEeCCCC
Q psy17610         83 GISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSA-IYDLQFPVNFSSVFATCSKN-----DIRIWSVRTL  156 (515)
Q Consensus        83 ~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~-v~~~~~~~~~~~l~~~~~d~-----~i~iw~~~~~  156 (515)
                      .|+|  +++.+..+|.|+.+|.|.+.+-.  .+...-++.+... |..+....+...|++.+.|+     .++||+++.-
T Consensus        27 ~isc--~~s~~~~vvigt~~G~V~~Ln~s--~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~  102 (933)
T KOG2114|consen   27 AISC--CSSSTGSVVIGTADGRVVILNSS--FQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKV  102 (933)
T ss_pred             ceeE--EcCCCceEEEeeccccEEEeccc--ceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEeccccc
Confidence            4444  57788999999999988887654  3554455556666 55554444446788877754     4899998743


Q ss_pred             ------cee--EEEEe-----cCeEEEEEEEeeCCCEEEEEeCCCeEEEEecC--CCc-eEEEecCCCCCCeEEEEEcCC
Q psy17610        157 ------NEL--LRISV-----MNMICACIVFTYDGKAILSGWNDGFIRCFTPQ--SGK-LKFIIPNAHNRGVTALAITQD  220 (515)
Q Consensus       157 ------~~~--~~~~~-----~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~--~~~-~~~~~~~~~~~~v~~~~~~~~  220 (515)
                            .++  .++.+     ...++.+++.+.+-+.+|+|-.+|.|.++.-+  ..+ ....+......+|+.+.+..+
T Consensus       103 ~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d  182 (933)
T KOG2114|consen  103 DKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSD  182 (933)
T ss_pred             CCCCCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecC
Confidence                  223  12222     24568899999999999999999999998422  111 122222345678999999998


Q ss_pred             CCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEE
Q psy17610        221 GTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLI  289 (515)
Q Consensus       221 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~  289 (515)
                      +..++.+.....|.+|.+...+ .....+..|...+.|..+++....+++++.+ .+.+|+.....+..
T Consensus       183 ~~s~lFv~Tt~~V~~y~l~gr~-p~~~~ld~~G~~lnCss~~~~t~qfIca~~e-~l~fY~sd~~~~cf  249 (933)
T KOG2114|consen  183 GKSVLFVATTEQVMLYSLSGRT-PSLKVLDNNGISLNCSSFSDGTYQFICAGSE-FLYFYDSDGRGPCF  249 (933)
T ss_pred             CceeEEEEecceeEEEEecCCC-cceeeeccCCccceeeecCCCCccEEEecCc-eEEEEcCCCcceee
Confidence            8773433444679999997444 4555678888899999998776656666554 68888876544433

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=98.80  E-value=8.1e-05  Score=71.48  Aligned_cols=281  Identities=13%  Similarity=0.163  Sum_probs=164.2

Q ss_pred             CCEEEEEecCceEEEEECCCCceeEEeeccCccCeE----------EEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEE
Q psy17610         93 NNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIY----------DLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRI  162 (515)
Q Consensus        93 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~----------~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~  162 (515)
                      +..|++++.++.|+-.|.++|+.+-.....-...+.          .+++.  +..++.++.++.+.-.|.++|+.+.+.
T Consensus        69 ~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av~--~~~v~v~t~dg~l~ALDa~TGk~~W~~  146 (527)
T TIGR03075        69 DGVMYVTTSYSRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVALY--DGKVFFGTLDARLVALDAKTGKVVWSK  146 (527)
T ss_pred             CCEEEEECCCCcEEEEECCCCceeeEecCCCCcccccccccccccccceEE--CCEEEEEcCCCEEEEEECCCCCEEeec
Confidence            567778888889999999998766554321111111          12222  347788888999999999999998776


Q ss_pred             EecCe----EEEEEEEeeCCCEEEEEeC------CCeEEEEecCCCceEEEecCCCCC----------------------
Q psy17610        163 SVMNM----ICACIVFTYDGKAILSGWN------DGFIRCFTPQSGKLKFIIPNAHNR----------------------  210 (515)
Q Consensus       163 ~~~~~----~v~~~~~~~~~~~l~~~~~------dg~i~~~~~~~~~~~~~~~~~~~~----------------------  210 (515)
                      .....    .+.+.-.--++ .++++..      +|.|..+|.++|+.+.........                      
T Consensus       147 ~~~~~~~~~~~tssP~v~~g-~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~p~~~~~~~~~~~~~~~~~~~~tw~~  225 (527)
T TIGR03075       147 KNGDYKAGYTITAAPLVVKG-KVITGISGGEFGVRGYVTAYDAKTGKLVWRRYTVPGDMGYLDKADKPVGGEPGAKTWPG  225 (527)
T ss_pred             ccccccccccccCCcEEECC-EEEEeecccccCCCcEEEEEECCCCceeEeccCcCCCcccccccccccccccccCCCCC
Confidence            53211    11111111134 4555432      689999999999987765322111                      


Q ss_pred             --------Ce-EEEEEcCCCCEEEEecCC-----C-----------cEEEEEccCCceeeEEeecccc-------CceEE
Q psy17610        211 --------GV-TALAITQDGTRLLSGGGE-----G-----------QVRIWKLTRESQSLQCVLKEHT-------SSVSV  258 (515)
Q Consensus       211 --------~v-~~~~~~~~~~~l~~~~~d-----~-----------~i~iw~~~~~~~~~~~~~~~~~-------~~v~~  258 (515)
                              .+ ..+++.++..++..+..+     +           .|.-.|+++++.........|.       ....-
T Consensus       226 ~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~TG~~~W~~Q~~~~D~wD~d~~~~p~l  305 (527)
T TIGR03075       226 DAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPDTGKIKWHYQTTPHDEWDYDGVNEMIL  305 (527)
T ss_pred             CccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEccccCCEEEeeeCCCCCCccccCCCCcEE
Confidence                    01 134666666666665532     2           3444455444333333332231       11122


Q ss_pred             EEEecCCC---EEEEEeCCCcEEEEEcccceEEEEE------------EcCc--c-------------------------
Q psy17610        259 IQIKSDSK---EAMSASTDGTCVLWDLIKSTRLIIM------------ILPS--M-------------------------  296 (515)
Q Consensus       259 ~~~~~~~~---~l~~~~~d~~i~iwd~~~~~~~~~~------------~~~~--~-------------------------  296 (515)
                      +....+|+   .++.+..+|.+.+.|.++++.+...            ....  +                         
T Consensus       306 ~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i~~~~~~~~~~w~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~Pg~~G  385 (527)
T TIGR03075       306 FDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLLSAEPFVDTVNWATGVDLKTGRPIEVPEARSADGKKGKPVGVCPGFLG  385 (527)
T ss_pred             EEeccCCcEEEEEEEeCCCceEEEEECCCCceeccccccCCcccccccCCCCCCCccChhhCcCCCCCCCeeEECCCCcC
Confidence            22334665   6778999999999999998875211            0000  0                         


Q ss_pred             ---EEEEEEcCCCcEEEEEECC---------------------------------CeEEEEeCCCCceEEEEecCCCccE
Q psy17610        297 ---IMSAAYHPSEVQLITCSTN---------------------------------KMIDYWETCDGSIIRSLEGSDVAAV  340 (515)
Q Consensus       297 ---~~~~~~~~~~~~l~~~~~~---------------------------------~~i~~~d~~~~~~~~~~~~~~~~~i  340 (515)
                         -..++++|+..++++...+                                 +.+.-+|+.+++...+....... .
T Consensus       386 g~~W~~~A~Dp~~g~~yvp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~g~l~AiD~~tGk~~W~~~~~~p~-~  464 (527)
T TIGR03075       386 GKNWQPMAYSPKTGLFYVPANEVCMDYEPEKVSYKKGAAYLGAGLTIKPPPDDHMGSLIAWDPITGKIVWEHKEDFPL-W  464 (527)
T ss_pred             CCCCCCceECCCCCEEEEecccccccccccccccCCCCceeccccccCCCCCCCceeEEEEeCCCCceeeEecCCCCC-C
Confidence               0125566665555443222                                 45777888888887776543211 1


Q ss_pred             EEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCC
Q psy17610        341 NCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGH  378 (515)
Q Consensus       341 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~  378 (515)
                      ... +.-.+.+++.+..+|.++.+|.++|+.+...+-.
T Consensus       465 ~~~-l~t~g~lvf~g~~~G~l~a~D~~TGe~lw~~~~g  501 (527)
T TIGR03075       465 GGV-LATAGDLVFYGTLEGYFKAFDAKTGEELWKFKTG  501 (527)
T ss_pred             Ccc-eEECCcEEEEECCCCeEEEEECCCCCEeEEEeCC
Confidence            111 1124557778888999999999999998877543

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=98.79  E-value=1e-05  Score=73.80  Aligned_cols=265  Identities=14%  Similarity=0.144  Sum_probs=141.1

Q ss_pred             cEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCC-------
Q psy17610         83 GISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRT-------  155 (515)
Q Consensus        83 ~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~-------  155 (515)
                      .|+.+.|+++..-||+|...|.|.+|.+...+...   .....+-....+.+-+      ..++.-.+-|+..       
T Consensus         3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~---~~~~~~~~~~~~~~~~------~~~~~~~l~di~~r~~~~~~   73 (395)
T PF08596_consen    3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYG---NREQPPDLDYNFRRFS------LNNSPGKLTDISDRAPPSLK   73 (395)
T ss_dssp             -EEEEEEETTTTEEEEEETTS-EEEEEEEE---------------------S--------GGGSS-SEEE-GGG--TT-S
T ss_pred             eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCC---ccCCCcccCccccccc------ccCCCcceEEehhhCCcccc
Confidence            58999999998999999999999999886532221   0001111111111100      0011112222221       


Q ss_pred             --CceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEec-------CCCCCCeEEEEEcC-----CC
Q psy17610        156 --LNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIP-------NAHNRGVTALAITQ-----DG  221 (515)
Q Consensus       156 --~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~-------~~~~~~v~~~~~~~-----~~  221 (515)
                        ..+..-+....++|++++.|. =-++++|..+|.+.+.|++....+..-.       ......++++.|.-     |+
T Consensus        74 ~gf~P~~l~~~~~g~vtal~~S~-iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~  152 (395)
T PF08596_consen   74 EGFLPLTLLDAKQGPVTALKNSD-IGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDG  152 (395)
T ss_dssp             EEEEEEEEE---S-SEEEEEE-B-TSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSS
T ss_pred             cccCchhheeccCCcEeEEecCC-CcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCc
Confidence              123344555678999999974 4589999999999999998887766521       12344688888862     33


Q ss_pred             ---CEEEEecCCCcEEEEEccC-CceeeE----EeeccccCceEEEE-EecCC--------------------CEEEEEe
Q psy17610        222 ---TRLLSGGGEGQVRIWKLTR-ESQSLQ----CVLKEHTSSVSVIQ-IKSDS--------------------KEAMSAS  272 (515)
Q Consensus       222 ---~~l~~~~~d~~i~iw~~~~-~~~~~~----~~~~~~~~~v~~~~-~~~~~--------------------~~l~~~~  272 (515)
                         -.+++|...|.+.+|.+.- ......    .....+.++|..+. ++.+.                    ..++...
T Consensus       153 ySSi~L~vGTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvv  232 (395)
T PF08596_consen  153 YSSICLLVGTNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVV  232 (395)
T ss_dssp             SEEEEEEEEETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE
T ss_pred             ccceEEEEEeCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEE
Confidence               4688899999999998852 222222    22224556666555 32221                    2244445


Q ss_pred             CCCcEEEEEcccceEEEEEEcC-ccEEEEEEc-----CCCcEEEEEECCCeEEEEeCCCCceEEEEecCCC---ccEEEE
Q psy17610        273 TDGTCVLWDLIKSTRLIIMILP-SMIMSAAYH-----PSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDV---AAVNCV  343 (515)
Q Consensus       273 ~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~---~~i~~~  343 (515)
                      .+..++++...+.+........ .....+.+-     ..+..|++-..+|.+++|.+..-+.+........   ..+...
T Consensus       233 Se~~irv~~~~~~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~~~~d~~~~~~s  312 (395)
T PF08596_consen  233 SESDIRVFKPPKSKGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLPPPLDSRRLSSS  312 (395)
T ss_dssp             -SSEEEEE-TT---EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-SS---HHHHTT-
T ss_pred             cccceEEEeCCCCcccceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhcccCCCcccccccccc
Confidence            5678999999887776655533 233344442     3567788889999999999999999888876421   234455


Q ss_pred             EEcCCCCEEEEEcC
Q psy17610        344 DFVDDGKYFLTGGA  357 (515)
Q Consensus       344 ~~~~~~~~l~~~~~  357 (515)
                      .++++|..++..+.
T Consensus       313 sis~~Gdi~~~~gp  326 (395)
T PF08596_consen  313 SISRNGDIFYWTGP  326 (395)
T ss_dssp             EE-TTS-EEEE-SS
T ss_pred             EECCCCCEEEEeCc
Confidence            66777776655543

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>KOG2695|consensus

Probab=98.78  E-value=2.2e-08  Score=84.05  Aligned_cols=153  Identities=16%  Similarity=0.238  Sum_probs=119.1

Q ss_pred             EEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCC-----ceEEEecCCCCCCeEE
Q psy17610        140 FATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSG-----KLKFIIPNAHNRGVTA  214 (515)
Q Consensus       140 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~-----~~~~~~~~~~~~~v~~  214 (515)
                      ++++.+..|-+-|+++|... .+. ....|.++.|...++.+..|.++|.|..+|++.+     .+...+  -|...|++
T Consensus       228 fs~G~sqqv~L~nvetg~~q-sf~-sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rl--yh~Ssvts  303 (425)
T KOG2695|consen  228 FSVGLSQQVLLTNVETGHQQ-SFQ-SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRL--YHDSSVTS  303 (425)
T ss_pred             ecccccceeEEEEeeccccc-ccc-cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEE--EcCcchhh
Confidence            56666778888888876432 232 5667888999988999999999999999999865     334444  69999999


Q ss_pred             EEEcC-CCCEEEEecCCCcEEEEEccCCc-eeeEEeeccccCceEEEE--EecCCCEEEEEeCCCcEEEEEcccceEEEE
Q psy17610        215 LAITQ-DGTRLLSGGGEGQVRIWKLTRES-QSLQCVLKEHTSSVSVIQ--IKSDSKEAMSASTDGTCVLWDLIKSTRLII  290 (515)
Q Consensus       215 ~~~~~-~~~~l~~~~~d~~i~iw~~~~~~-~~~~~~~~~~~~~v~~~~--~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~  290 (515)
                      +..-. ++++|.+.+.+|.|++||.+.-+ ..-+..+.+|...-.-+.  ..+....+++++.|...++|.++.+..+.+
T Consensus       304 lq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl~t  383 (425)
T KOG2695|consen  304 LQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLLCT  383 (425)
T ss_pred             hhhhccccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEecccCceeec
Confidence            98877 78899999999999999996322 234777888876544443  356677889999999999999999998888


Q ss_pred             EEcCcc
Q psy17610        291 MILPSM  296 (515)
Q Consensus       291 ~~~~~~  296 (515)
                      +..+..
T Consensus       384 ipf~~s  389 (425)
T KOG2695|consen  384 IPFPYS  389 (425)
T ss_pred             cCCCCc
Confidence            776654

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=98.77  E-value=2.5e-08  Score=57.86  Aligned_cols=39  Identities=38%  Similarity=0.520  Sum_probs=36.6

Q ss_pred             CeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEe
Q psy17610        369 GVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWT  407 (515)
Q Consensus       369 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~  407 (515)
                      ++++..+.+|...|++++|+|++++|++++.|+.|++||
T Consensus         1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            367788999999999999999999999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>KOG2695|consensus

Probab=98.73  E-value=2.9e-08  Score=83.36  Aligned_cols=136  Identities=23%  Similarity=0.330  Sum_probs=105.1

Q ss_pred             CCcEEEEEEecCCCEEEEEecCceEEEEECCCC-----ceeEEeeccCccCeEEEEeCC-CCcEEEEEecCCcEEEEeCC
Q psy17610         81 DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSG-----FTLTLVNTCHTSAIYDLQFPV-NFSSVFATCSKNDIRIWSVR  154 (515)
Q Consensus        81 ~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~-----~~~~~~~~~h~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~  154 (515)
                      .+.|.++.|...++++..|+.+|.|..+|+..+     +....++  |...|+++..-. ++++|++++.+|+|++||.+
T Consensus       252 ksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rly--h~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R  329 (425)
T KOG2695|consen  252 KSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLY--HDSSVTSLQILQFSQQKLMASDMTGKIKLYDLR  329 (425)
T ss_pred             chhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEEE--cCcchhhhhhhccccceEeeccCcCceeEeeeh
Confidence            477899999998999999999999999999763     3333333  999999998766 67899999999999999998


Q ss_pred             CCce---eEEEEecCeEEEE--EEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCC---CCeEEEEEc
Q psy17610        155 TLNE---LLRISVMNMICAC--IVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHN---RGVTALAIT  218 (515)
Q Consensus       155 ~~~~---~~~~~~~~~~v~~--~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~---~~v~~~~~~  218 (515)
                      --++   +.++.+|-..-.-  +...+....+++++.|...++|.++.|....+++....   ..+.+++|.
T Consensus       330 ~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl~tipf~~s~~e~d~~sv~~~  401 (425)
T KOG2695|consen  330 ATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLLCTIPFPYSASEVDIPSVAFD  401 (425)
T ss_pred             hhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEecccCceeeccCCCCccccccccceehh
Confidence            7666   7888887654322  23345667888999999999999999999888753322   234455554

>KOG2066|consensus

Probab=98.71  E-value=9.3e-07  Score=83.11  Aligned_cols=181  Identities=15%  Similarity=0.145  Sum_probs=133.6

Q ss_pred             CCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEE
Q psy17610        210 RGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLI  289 (515)
Q Consensus       210 ~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~  289 (515)
                      ..++|++++  +++|+.|+.+|.|++++....   . .....|+..      ..+|.++++++.||+|.+-.+-+.+...
T Consensus        40 D~is~~av~--~~~~~~GtH~g~v~~~~~~~~---~-~~~~~~s~~------~~~Gey~asCS~DGkv~I~sl~~~~~~~  107 (846)
T KOG2066|consen   40 DAISCCAVH--DKFFALGTHRGAVYLTTCQGN---P-KTNFDHSSS------ILEGEYVASCSDDGKVVIGSLFTDDEIT  107 (846)
T ss_pred             hHHHHHHhh--cceeeeccccceEEEEecCCc---c-ccccccccc------ccCCceEEEecCCCcEEEeeccCCccce
Confidence            345666665  568999999999999997532   1 223334433      5689999999999999999999999999


Q ss_pred             EEEcCccEEEEEEcCC-----CcEEEEEECCCeEEEEeCCC---CceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeE
Q psy17610        290 IMILPSMIMSAAYHPS-----EVQLITCSTNKMIDYWETCD---GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIV  361 (515)
Q Consensus       290 ~~~~~~~~~~~~~~~~-----~~~l~~~~~~~~i~~~d~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i  361 (515)
                      .+....++.+++++|+     .+.+++|+..| +.++.-+=   ...+ .+. ...++|.++.|.  |+++|-++.+| |
T Consensus       108 ~~df~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v-~l~-~~eG~I~~i~W~--g~lIAWand~G-v  181 (846)
T KOG2066|consen  108 QYDFKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSV-VLS-EGEGPIHSIKWR--GNLIAWANDDG-V  181 (846)
T ss_pred             eEecCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccce-eee-cCccceEEEEec--CcEEEEecCCC-c
Confidence            9999999999999997     57889999888 76665321   1112 222 233899999996  77999998776 8


Q ss_pred             EEEEccCCeeeeeccCCCCCe------eEEEECCCCcEEEEEeCCCcEEEEeCCC
Q psy17610        362 KMWMYREGVPCFVGIGHAASI------TKIKISPDKKVIVSVSADGGIFLWTFPE  410 (515)
Q Consensus       362 ~i~d~~~~~~~~~~~~~~~~i------~~~~~~~~~~~l~~~~~dg~i~iw~~~~  410 (515)
                      ++||..+++.+..++.....+      ..+.|.++.+ |+.| ...+|++..++.
T Consensus       182 ~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~~-LVIG-W~d~v~i~~I~~  234 (846)
T KOG2066|consen  182 KVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDEDR-LVIG-WGDSVKICSIKK  234 (846)
T ss_pred             EEEeccccceeeccCCCCCCCCcccCCCceEecCCCe-EEEe-cCCeEEEEEEec
Confidence            999999988777665443333      4577776654 5545 555899998873

>KOG1897|consensus

Probab=98.70  E-value=0.00041  Score=67.70  Aligned_cols=403  Identities=11%  Similarity=0.096  Sum_probs=224.9

Q ss_pred             CCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCC--Cc----EEEEEecCCcE-EEEeC
Q psy17610         81 DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVN--FS----SVFATCSKNDI-RIWSV  153 (515)
Q Consensus        81 ~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~----~l~~~~~d~~i-~iw~~  153 (515)
                      .+.++..+.+.+...++.++.++.+...+...+.............|.|+.++|-  ++    .++++..+..+ .+--.
T Consensus       487 p~~~ti~~~~~n~sqVvvA~~~~~l~y~~i~~~~l~e~~~~~~e~evaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l~~~  566 (1096)
T KOG1897|consen  487 PGKITIGVVSANASQVVVAGGGLALFYLEIEDGGLREVSHKEFEYEVACLDISPLGDAPNKSRLLAVGLWSDISMILTFL  566 (1096)
T ss_pred             CCceEEEEEeecceEEEEecCccEEEEEEeeccceeeeeeheecceeEEEecccCCCCCCcceEEEEEeecceEEEEEEC
Confidence            4667777777777788888888888888887754222222234568999999974  32    45555544443 33333


Q ss_pred             CCCceeEEEE----ecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecC--CCceEEEec-CCCCCCeEEEEEcCCCCEEEE
Q psy17610        154 RTLNELLRIS----VMNMICACIVFTYDGKAILSGWNDGFIRCFTPQ--SGKLKFIIP-NAHNRGVTALAITQDGTRLLS  226 (515)
Q Consensus       154 ~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~--~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~  226 (515)
                      .+...+....    .-...|....+-.|..+|.++..||.+.-|.+.  ++.....-. .--..++.--.|+..++.-+.
T Consensus       567 pd~~~~~~~~l~~~~iPRSIl~~~~e~d~~yLlvalgdG~l~~fv~d~~tg~lsd~Kk~~lGt~P~~Lr~f~sk~~t~vf  646 (1096)
T KOG1897|consen  567 PDLILITHEQLSGEIIPRSILLTTFEGDIHYLLVALGDGALLYFVLDINTGQLSDRKKVTLGTQPISLRTFSSKSRTAVF  646 (1096)
T ss_pred             CCcceeeeeccCCCccchheeeEEeeccceEEEEEcCCceEEEEEEEcccceEccccccccCCCCcEEEEEeeCCceEEE
Confidence            4433332221    112234445565668899999999998766544  444321110 112445666667665544444


Q ss_pred             ecCCCcEEEEEccCCceeeEEeeccccCceEE-EEEecC--CCEEEEEeCCCcEEEEEcccceE--EEEEEcCccEEEEE
Q psy17610        227 GGGEGQVRIWKLTRESQSLQCVLKEHTSSVSV-IQIKSD--SKEAMSASTDGTCVLWDLIKSTR--LIIMILPSMIMSAA  301 (515)
Q Consensus       227 ~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~-~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~--~~~~~~~~~~~~~~  301 (515)
                      +..|.-..+|..+   .++...--. -..+.. ..|+.+  ...++++. .+.+++.-+..-+.  .++.........++
T Consensus       647 a~sdrP~viY~~n---~kLv~spls-~kev~~~c~f~s~a~~d~l~~~~-~~~l~i~tid~iqkl~irtvpl~~~prrI~  721 (1096)
T KOG1897|consen  647 ALSDRPTVIYSSN---GKLVYSPLS-LKEVNHMCPFNSDAYPDSLASAN-GGALTIGTIDEIQKLHIRTVPLGESPRRIC  721 (1096)
T ss_pred             EeCCCCEEEEecC---CcEEEeccc-hHHhhhhcccccccCCceEEEec-CCceEEEEecchhhcceeeecCCCChhheE
Confidence            5555666666642   222211100 011111 122211  22344443 34566665543322  33355556677777


Q ss_pred             EcCCCcEEEEEECC--------------CeEEEEeCCCCceEEEEecCCCcc---EEEEEEcCC-CCEEEEEcC------
Q psy17610        302 YHPSEVQLITCSTN--------------KMIDYWETCDGSIIRSLEGSDVAA---VNCVDFVDD-GKYFLTGGA------  357 (515)
Q Consensus       302 ~~~~~~~l~~~~~~--------------~~i~~~d~~~~~~~~~~~~~~~~~---i~~~~~~~~-~~~l~~~~~------  357 (515)
                      +.+....+.+.+..              ..++++|.++.+.+...+......   +.++.|..| +.++++|..      
T Consensus       722 ~q~~sl~~~v~s~r~e~~~~~~~ee~~~s~l~vlD~nTf~vl~~hef~~~E~~~Si~s~~~~~d~~t~~vVGT~~v~Pde  801 (1096)
T KOG1897|consen  722 YQESSLTFGVLSNRIESSAEYYGEEYEVSFLRVLDQNTFEVLSSHEFERNETALSIISCKFTDDPNTYYVVGTGLVYPDE  801 (1096)
T ss_pred             ecccceEEEEEecccccchhhcCCcceEEEEEEecCCceeEEeeccccccceeeeeeeeeecCCCceEEEEEEEeeccCC
Confidence            77755444443321              246778877777666555443333   344457777 777887753      


Q ss_pred             ----CCeEEEEEccCCeeeeeccCC--CCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeeccccc
Q psy17610        358 ----DQIVKMWMYREGVPCFVGIGH--AASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTAR  431 (515)
Q Consensus       358 ----dg~i~i~d~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~  431 (515)
                          .|.|.+|.+..+..+.....+  ++.+.++.. -+|++||..  ...|++|+....+....               
T Consensus       802 ~ep~~GRIivfe~~e~~~L~~v~e~~v~Gav~aL~~-fngkllA~I--n~~vrLye~t~~~eLr~---------------  863 (1096)
T KOG1897|consen  802 NEPVNGRIIVFEFEELNSLELVAETVVKGAVYALVE-FNGKLLAGI--NQSVRLYEWTTERELRI---------------  863 (1096)
T ss_pred             CCcccceEEEEEEecCCceeeeeeeeeccceeehhh-hCCeEEEec--CcEEEEEEccccceehh---------------
Confidence                478888888774444433222  234444332 167766654  45799998876522111               


Q ss_pred             ccceeeecCcccEEEeeeccCCcEEEEeecCCeEEE--EecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEE
Q psy17610        432 STRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDY--WETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVK  509 (515)
Q Consensus       432 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~i--wd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~  509 (515)
                           ...+..++..+...-.|..+++|+--+++.+  |+-..|...-....-++...+++.+-.+..++ -+..+|.+.
T Consensus       864 -----e~~~~~~~~aL~l~v~gdeI~VgDlm~Sitll~y~~~eg~f~evArD~~p~Wmtaveil~~d~yl-gae~~gNlf  937 (1096)
T KOG1897|consen  864 -----ECNISNPIIALDLQVKGDEIAVGDLMRSITLLQYKGDEGNFEEVARDYNPNWMTAVEILDDDTYL-GAENSGNLF  937 (1096)
T ss_pred             -----hhcccCCeEEEEEEecCcEEEEeeccceEEEEEEeccCCceEEeehhhCccceeeEEEecCceEE-eecccccEE
Confidence                 1112345777888888999999998777665  44445556555555555677888887665544 455667666


Q ss_pred             EEE
Q psy17610        510 ICL  512 (515)
Q Consensus       510 iw~  512 (515)
                      +-.
T Consensus       938 ~v~  940 (1096)
T KOG1897|consen  938 TVR  940 (1096)
T ss_pred             EEE
Confidence            543

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=98.69  E-value=2.6e-05  Score=72.26  Aligned_cols=223  Identities=17%  Similarity=0.082  Sum_probs=125.1

Q ss_pred             CCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCcee
Q psy17610         80 DDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNEL  159 (515)
Q Consensus        80 ~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~  159 (515)
                      ..-....+.++|+|+++++ +.+|...|+..... .-..     .+.-...+|.+.+ .+++-...++|.|+.--+.+..
T Consensus        31 ~~~~p~~ls~npngr~v~V-~g~geY~iyt~~~~-r~k~-----~G~g~~~vw~~~n-~yAv~~~~~~I~I~kn~~~~~~  102 (443)
T PF04053_consen   31 CEIYPQSLSHNPNGRFVLV-CGDGEYEIYTALAW-RNKA-----FGSGLSFVWSSRN-RYAVLESSSTIKIYKNFKNEVV  102 (443)
T ss_dssp             -SS--SEEEE-TTSSEEEE-EETTEEEEEETTTT-EEEE-----EEE-SEEEE-TSS-EEEEE-TTS-EEEEETTEE-TT
T ss_pred             CCcCCeeEEECCCCCEEEE-EcCCEEEEEEccCC-cccc-----cCceeEEEEecCc-cEEEEECCCeEEEEEcCccccc
Confidence            4455789999999999998 55778888885442 2222     2344668898865 5666666888999643333333


Q ss_pred             EEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEcc
Q psy17610        160 LRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLT  239 (515)
Q Consensus       160 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~  239 (515)
                      ..+.... .+..+-.   |..|+..+.+ .|.+||.++++.+..+.  . .+|..+.|++++++++..+.+ .+.+++.+
T Consensus       103 k~i~~~~-~~~~If~---G~LL~~~~~~-~i~~yDw~~~~~i~~i~--v-~~vk~V~Ws~~g~~val~t~~-~i~il~~~  173 (443)
T PF04053_consen  103 KSIKLPF-SVEKIFG---GNLLGVKSSD-FICFYDWETGKLIRRID--V-SAVKYVIWSDDGELVALVTKD-SIYILKYN  173 (443)
T ss_dssp             -----SS--EEEEE----SSSEEEEETT-EEEEE-TTT--EEEEES--S--E-EEEEE-TTSSEEEEE-S--SEEEEEE-
T ss_pred             eEEcCCc-ccceEEc---CcEEEEECCC-CEEEEEhhHcceeeEEe--c-CCCcEEEEECCCCEEEEEeCC-eEEEEEec
Confidence            3444332 2333322   7766666544 89999999999999883  2 248999999999999988765 68887764


Q ss_pred             CC---------ceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEE
Q psy17610        240 RE---------SQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLI  310 (515)
Q Consensus       240 ~~---------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  310 (515)
                      ..         -.........-...|.+..|..+  .++..... .++.  +..++.......+.++.-+.+.|..+.++
T Consensus       174 ~~~~~~~~~~g~e~~f~~~~E~~~~IkSg~W~~d--~fiYtT~~-~lkY--l~~Ge~~~i~~ld~~~yllgy~~~~~~ly  248 (443)
T PF04053_consen  174 LEAVAAIPEEGVEDAFELIHEISERIKSGCWVED--CFIYTTSN-HLKY--LVNGETGIIAHLDKPLYLLGYLPKENRLY  248 (443)
T ss_dssp             HHHHHHBTTTB-GGGEEEEEEE-S--SEEEEETT--EEEEE-TT-EEEE--EETTEEEEEEE-SS--EEEEEETTTTEEE
T ss_pred             chhcccccccCchhceEEEEEecceeEEEEEEcC--EEEEEcCC-eEEE--EEcCCcceEEEcCCceEEEEEEccCCEEE
Confidence            32         00122233333678888999766  55554544 6666  55666666666677777788888777888


Q ss_pred             EEECCCeEEEEeCC
Q psy17610        311 TCSTNKMIDYWETC  324 (515)
Q Consensus       311 ~~~~~~~i~~~d~~  324 (515)
                      ....++.+..+.+.
T Consensus       249 ~~Dr~~~v~~~~ld  262 (443)
T PF04053_consen  249 LIDRDGNVISYELD  262 (443)
T ss_dssp             EE-TT--EEEEE--
T ss_pred             EEECCCCEEEEEEC
Confidence            88788777776553

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=98.66  E-value=0.00012  Score=64.95  Aligned_cols=244  Identities=15%  Similarity=0.141  Sum_probs=119.8

Q ss_pred             eCCCCceeEEEEecCeEEEE-----EEEeeCCCEEEEEeC-C--CeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCE
Q psy17610        152 SVRTLNELLRISVMNMICAC-----IVFTYDGKAILSGWN-D--GFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTR  223 (515)
Q Consensus       152 ~~~~~~~~~~~~~~~~~v~~-----~~~~~~~~~l~~~~~-d--g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  223 (515)
                      |..+|..+.++.........     =+|.++|+.|+.++. +  ..+.+.|+.+++..+...... .......++|+++.
T Consensus        16 D~~TG~~VtrLT~~~~~~h~~YF~~~~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g-~~~~g~~~s~~~~~   94 (386)
T PF14583_consen   16 DPDTGHRVTRLTPPDGHSHRLYFYQNCFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPG-DNTFGGFLSPDDRA   94 (386)
T ss_dssp             -TTT--EEEE-S-TTS-EE---TTS--B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS--B-TTT-EE-TTSSE
T ss_pred             CCCCCceEEEecCCCCcccceeecCCCcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCC-CCccceEEecCCCe
Confidence            56677777777655443332     346778987776654 3  467888999998877653222 22224567788888


Q ss_pred             EEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEE--ecCCCEEEEEe----------------------CCCcEEE
Q psy17610        224 LLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQI--KSDSKEAMSAS----------------------TDGTCVL  279 (515)
Q Consensus       224 l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~----------------------~d~~i~i  279 (515)
                      ++.......++-.|+.+.+...+...+  ...+-...|  +.++..++-.-                      -...|.-
T Consensus        95 ~~Yv~~~~~l~~vdL~T~e~~~vy~~p--~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~  172 (386)
T PF14583_consen   95 LYYVKNGRSLRRVDLDTLEERVVYEVP--DDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFT  172 (386)
T ss_dssp             EEEEETTTEEEEEETTT--EEEEEE----TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEE
T ss_pred             EEEEECCCeEEEEECCcCcEEEEEECC--cccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEE
Confidence            776555567888888665554444443  333433444  34455543221                      1224566


Q ss_pred             EEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCC-----eEEEEeCCC-CceEEEEecC-CCccEEEEEEcCCCCEE
Q psy17610        280 WDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNK-----MIDYWETCD-GSIIRSLEGS-DVAAVNCVDFVDDGKYF  352 (515)
Q Consensus       280 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~i~~~d~~~-~~~~~~~~~~-~~~~i~~~~~~~~~~~l  352 (515)
                      .|+.+++....+.....+..+.++|....+++-+..|     .-++|-+++ +...+.+..+ ....+..=-|.|||..|
T Consensus       173 idl~tG~~~~v~~~~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~~e~~gHEfw~~DG~~i  252 (386)
T PF14583_consen  173 IDLKTGERKVVFEDTDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRMEGESVGHEFWVPDGSTI  252 (386)
T ss_dssp             EETTT--EEEEEEESS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS---EESS---TTEEEEEEEE-TTSS-E
T ss_pred             EECCCCceeEEEecCccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCcceeeecCCCCcccccccccCCCCEE
Confidence            6888888888888888889999999776666554433     124454332 3333333222 22344555689999877


Q ss_pred             EEE-----cCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCC
Q psy17610        353 LTG-----GADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSAD  400 (515)
Q Consensus       353 ~~~-----~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d  400 (515)
                      .--     +.+..|.-+|..+++.....  .......+--++|+++++-=+.|
T Consensus       253 ~y~~~~~~~~~~~i~~~d~~t~~~~~~~--~~p~~~H~~ss~Dg~L~vGDG~d  303 (386)
T PF14583_consen  253 WYDSYTPGGQDFWIAGYDPDTGERRRLM--EMPWCSHFMSSPDGKLFVGDGGD  303 (386)
T ss_dssp             EEEEEETTT--EEEEEE-TTT--EEEEE--EE-SEEEEEE-TTSSEEEEEE--
T ss_pred             EEEeecCCCCceEEEeeCCCCCCceEEE--eCCceeeeEEcCCCCEEEecCCC
Confidence            642     22446777888877553322  11234456677899877644443

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=98.64  E-value=9.5e-05  Score=68.65  Aligned_cols=244  Identities=12%  Similarity=0.040  Sum_probs=128.0

Q ss_pred             eEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCce-------eEEEEecCeEEEEEEEee
Q psy17610        104 EIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNE-------LLRISVMNMICACIVFTY  176 (515)
Q Consensus       104 ~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~-------~~~~~~~~~~v~~~~~~~  176 (515)
                      .|.||+... ..+..+.-.+ +.|.++.|+.+ ..|++...||.++++|+. |+.       +.........+....+..
T Consensus        62 ~I~iys~sG-~ll~~i~w~~-~~iv~~~wt~~-e~LvvV~~dG~v~vy~~~-G~~~fsl~~~i~~~~v~e~~i~~~~~~~  137 (410)
T PF04841_consen   62 SIQIYSSSG-KLLSSIPWDS-GRIVGMGWTDD-EELVVVQSDGTVRVYDLF-GEFQFSLGEEIEEEKVLECRIFAIWFYK  137 (410)
T ss_pred             EEEEECCCC-CEeEEEEECC-CCEEEEEECCC-CeEEEEEcCCEEEEEeCC-CceeechhhhccccCcccccccccccCC
Confidence            599999876 4555543333 89999999986 578888899999999986 333       111111112222223333


Q ss_pred             CCCEEEEEeCCCeEEEEecCCCc-eEEE---ecCC----CCC-CeEE-EEEcCCCCEEEEecCCCcEEEEEccCCceeeE
Q psy17610        177 DGKAILSGWNDGFIRCFTPQSGK-LKFI---IPNA----HNR-GVTA-LAITQDGTRLLSGGGEGQVRIWKLTRESQSLQ  246 (515)
Q Consensus       177 ~~~~l~~~~~dg~i~~~~~~~~~-~~~~---~~~~----~~~-~v~~-~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~  246 (515)
                      +|  ++.-..++.+.+.+-.... ....   .+..    +.. .... ..++.+....+....++.+.+.+-..-  .  
T Consensus       138 ~G--ivvLt~~~~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~i~~~~g~~i~~i~~~~~--~--  211 (410)
T PF04841_consen  138 NG--IVVLTGNNRFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVEILLANGETIYIIDENSF--K--  211 (410)
T ss_pred             CC--EEEECCCCeEEEEeCccccchhhccccCCCcccccccccccccceEeecCcceEEEEecCCEEEEEEcccc--c--
Confidence            45  4444445555544322211 1111   1100    000 0000 223334444444444455553332110  0  


Q ss_pred             EeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC--ccEEEEEEcCCCcEEEEEECCCeEEEEeCC
Q psy17610        247 CVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP--SMIMSAAYHPSEVQLITCSTNKMIDYWETC  324 (515)
Q Consensus       247 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~  324 (515)
                       .+. ..+++..+++||++++++.-..+|.+.+.+..-.+....+...  .....+.|.-++..++.-  ...+.+... 
T Consensus       212 -~i~-~~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~dav~l~~--~~~l~lvg~-  286 (410)
T PF04841_consen  212 -QID-SDGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGNDAVVLSW--EDELLLVGP-  286 (410)
T ss_pred             -ccc-CCCCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecCcCCCCcEEEEECCCcEEEEe--CCEEEEECC-
Confidence             011 2468999999999999999999999988876655555555544  456667776554333222  223333321 


Q ss_pred             CCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccC
Q psy17610        325 DGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIG  377 (515)
Q Consensus       325 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~  377 (515)
                                 ...   .+.|.-++..++..-.|| ++|+.-..-+.+...+.
T Consensus       287 -----------~~~---~~~~~~~~~~~l~~E~DG-~riit~~~~~~l~~Vp~  324 (410)
T PF04841_consen  287 -----------DGD---SISFWYDGPVILVSEIDG-VRIITSTSHEFLQRVPD  324 (410)
T ss_pred             -----------CCC---ceEEeccCceEEeccCCc-eEEEeCCceEEEEECCH
Confidence                       111   123333444444454555 77776555555555443

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=98.61  E-value=0.00014  Score=66.93  Aligned_cols=121  Identities=14%  Similarity=0.101  Sum_probs=84.0

Q ss_pred             EEEcCccEEEEEEcCC-CcEEEEE----ECCCe----EEEEeCCCCce--EEEEecCCCccEEEEEEcCCCCEEEEEcCC
Q psy17610        290 IMILPSMIMSAAYHPS-EVQLITC----STNKM----IDYWETCDGSI--IRSLEGSDVAAVNCVDFVDDGKYFLTGGAD  358 (515)
Q Consensus       290 ~~~~~~~~~~~~~~~~-~~~l~~~----~~~~~----i~~~d~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d  358 (515)
                      .+.......++.|+.. ...+.+.    +.+|.    -.+|+....+.  +.....+....+.+++++|+...++.|+.|
T Consensus       201 yirTE~dPl~~~Fs~~~~~qi~tVE~s~s~~g~~~~d~ciYE~~r~klqrvsvtsipL~s~v~~ca~sp~E~kLvlGC~D  280 (545)
T PF11768_consen  201 YIRTENDPLDVEFSLNQPYQIHTVEQSISVKGEPSADSCIYECSRNKLQRVSVTSIPLPSQVICCARSPSEDKLVLGCED  280 (545)
T ss_pred             EEEecCCcEEEEccCCCCcEEEEEEEecCCCCCceeEEEEEEeecCceeEEEEEEEecCCcceEEecCcccceEEEEecC
Confidence            3344445566777653 3333332    22332    34566654432  222333444789999999999999999999


Q ss_pred             CeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCc
Q psy17610        359 QIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELE  412 (515)
Q Consensus       359 g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  412 (515)
                      |.|.+||...+...  .....-..+.++|+|+|..+++|+..|.+.+||+.-..
T Consensus       281 gSiiLyD~~~~~t~--~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALsp  332 (545)
T PF11768_consen  281 GSIILYDTTRGVTL--LAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALSP  332 (545)
T ss_pred             CeEEEEEcCCCeee--eeeecccceEEEEcCCCcEEEEEcCCceEEEEEeecCc
Confidence            99999998766333  33455667899999999999999999999999987543

>KOG3621|consensus

Probab=98.59  E-value=4.4e-05  Score=71.28  Aligned_cols=137  Identities=15%  Similarity=0.180  Sum_probs=99.5

Q ss_pred             eEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeE
Q psy17610        167 MICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQ  246 (515)
Q Consensus       167 ~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~  246 (515)
                      ..+.--+++..+++++.|+..|.+.+|+-..++.......+....+.....+++..++|.|+..|.|.++.++.......
T Consensus        34 ~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~  113 (726)
T KOG3621|consen   34 ARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDL  113 (726)
T ss_pred             ceEEEEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcc
Confidence            34455566778899999999999999998887776554334455566778888888999999999999998865322211


Q ss_pred             Ee----eccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccc-----eEEEEEEcCccEEEEEEc
Q psy17610        247 CV----LKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKS-----TRLIIMILPSMIMSAAYH  303 (515)
Q Consensus       247 ~~----~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-----~~~~~~~~~~~~~~~~~~  303 (515)
                      ..    -..|...|++++|++++..+++|...|+|.+-.+...     .....+..++.|..+.+.
T Consensus       114 ~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s~~~~~~~~q~il~~ds~IVQlD~~  179 (726)
T KOG3621|consen  114 DYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDSRQAFLSKSQEILSEDSEIVQLDYL  179 (726)
T ss_pred             eeeccccccCCceEEEEEecccccEEeecCCCceEEEEEechhhhhccccceeeccCcceEEeecc
Confidence            11    1236789999999999999999999999998887761     222333445555555543

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=98.59  E-value=2.9e-05  Score=71.24  Aligned_cols=132  Identities=11%  Similarity=0.200  Sum_probs=92.8

Q ss_pred             ceEEEEEecCCCcEEEEEEec-CCCEEEEE----ecCce----EEEEECCCCc--eeEEeeccCccCeEEEEeCCCCcEE
Q psy17610         71 GVTALYLLKDDSGISSLQYNP-VNNKVFVG----TVNCE----IFLIDMNSGF--TLTLVNTCHTSAIYDLQFPVNFSSV  139 (515)
Q Consensus        71 ~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~----~~d~~----i~iw~~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l  139 (515)
                      +.+.+.....+....++.||- +...+.+-    +.+|.    -.+|++..++  .+..+.-.....|.+.+++|+...+
T Consensus       195 klEvL~yirTE~dPl~~~Fs~~~~~qi~tVE~s~s~~g~~~~d~ciYE~~r~klqrvsvtsipL~s~v~~ca~sp~E~kL  274 (545)
T PF11768_consen  195 KLEVLSYIRTENDPLDVEFSLNQPYQIHTVEQSISVKGEPSADSCIYECSRNKLQRVSVTSIPLPSQVICCARSPSEDKL  274 (545)
T ss_pred             cEEEEEEEEecCCcEEEEccCCCCcEEEEEEEecCCCCCceeEEEEEEeecCceeEEEEEEEecCCcceEEecCcccceE
Confidence            345555555666778888887 44444442    22333    4456665432  1122233578899999999999999


Q ss_pred             EEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEe
Q psy17610        140 FATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFII  204 (515)
Q Consensus       140 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~  204 (515)
                      +.||.||+|.+||...+..  ......-..+.++|+|+|..+++|+..|.+.+||+.-......+
T Consensus       275 vlGC~DgSiiLyD~~~~~t--~~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALspi~~qL  337 (545)
T PF11768_consen  275 VLGCEDGSIILYDTTRGVT--LLAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALSPIKMQL  337 (545)
T ss_pred             EEEecCCeEEEEEcCCCee--eeeeecccceEEEEcCCCcEEEEEcCCceEEEEEeecCccceee
Confidence            9999999999999876533  33344556788999999999999999999999998765444333

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=98.59  E-value=0.00017  Score=61.12  Aligned_cols=200  Identities=17%  Similarity=0.160  Sum_probs=115.9

Q ss_pred             eeccCccCeEEEEeCCCCcEEEEEec-CCcEEEEeCCCCceeEEEEecC-eEEEEEEEeeCCCEEEEEeCCCeEEEEecC
Q psy17610        119 VNTCHTSAIYDLQFPVNFSSVFATCS-KNDIRIWSVRTLNELLRISVMN-MICACIVFTYDGKAILSGWNDGFIRCFTPQ  196 (515)
Q Consensus       119 ~~~~h~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~  196 (515)
                      .+.+-...+..++|.|+...|++... .+.|...+. +|+.++++.... +..-.+++..++.++++--+++.+.++++.
T Consensus        16 ~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~   94 (248)
T PF06977_consen   16 PLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTID   94 (248)
T ss_dssp             E-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE-
T ss_pred             ECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEEe
Confidence            34455566999999998777777766 677877886 478888876443 346778888777766666568999998883


Q ss_pred             CCc--e----EEEe----cCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccC--Cc-eeeEEee------ccccCceE
Q psy17610        197 SGK--L----KFII----PNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTR--ES-QSLQCVL------KEHTSSVS  257 (515)
Q Consensus       197 ~~~--~----~~~~----~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~--~~-~~~~~~~------~~~~~~v~  257 (515)
                      ...  .    ...+    ...+...+..++|++.++.|+.+-+..-..+|.++.  .. .......      ......+.
T Consensus        95 ~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S  174 (248)
T PF06977_consen   95 DDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLS  174 (248)
T ss_dssp             ---TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS---
T ss_pred             ccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceecccc
Confidence            321  1    1111    123556799999999888888887777777887753  11 1111111      12344578


Q ss_pred             EEEEecCCCE-EEEEeCCCcEEEEEcccceEEEEEEcCc----------cEEEEEEcCCCcEEEEEECCCeEEEE
Q psy17610        258 VIQIKSDSKE-AMSASTDGTCVLWDLIKSTRLIIMILPS----------MIMSAAYHPSEVQLITCSTNKMIDYW  321 (515)
Q Consensus       258 ~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~----------~~~~~~~~~~~~~l~~~~~~~~i~~~  321 (515)
                      +++++|.... ++....+..+..+| .+++.+..+....          +...+++.++|+..++. +.+..++|
T Consensus       175 ~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIvs-EpNlfy~f  247 (248)
T PF06977_consen  175 GLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIVS-EPNLFYRF  247 (248)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEEE-TTTEEEEE
T ss_pred             ceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEEEc-CCceEEEe
Confidence            8999987554 55556677888888 6777777665543          58899999998665554 55544443

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=98.58  E-value=0.00052  Score=63.44  Aligned_cols=258  Identities=14%  Similarity=0.144  Sum_probs=170.4

Q ss_pred             CeEEEEeCCCCcEEEEEec-CCcEEEEeCCCCceeEE-EEecCeEEEEEEEeeCCCEEEE-EeCCCeEEEEecCCCceEE
Q psy17610        126 AIYDLQFPVNFSSVFATCS-KNDIRIWSVRTLNELLR-ISVMNMICACIVFTYDGKAILS-GWNDGFIRCFTPQSGKLKF  202 (515)
Q Consensus       126 ~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~~~~~~~~~~~~  202 (515)
                      ....+...|++..+..... ...+...+.. ...... .......-..++.++.+..+.. ...++.|.+.|..+.+...
T Consensus        32 ~~~~v~~~~~g~~~~v~~~~~~~~~~~~~~-~n~~~~~~~~g~~~p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~  110 (381)
T COG3391          32 GPGGVAVNPDGTQVYVANSGSNDVSVIDAT-SNTVTQSLSVGGVYPAGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLG  110 (381)
T ss_pred             CCceeEEcCccCEEEEEeecCceeeecccc-cceeeeeccCCCccccceeeCCCCCeEEEecCCCCeEEEEcCcccceee
Confidence            4566778888866655554 3345555544 222221 1111123356778888875554 4456889999988888777


Q ss_pred             EecCCCCCCeEEEEEcCCCCEEEEecC---CCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEe-CCCcEE
Q psy17610        203 IIPNAHNRGVTALAITQDGTRLLSGGG---EGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAS-TDGTCV  278 (515)
Q Consensus       203 ~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~  278 (515)
                      ....+.  ....++++++++.+.++..   ++.+.+.|..  +.........-..+ ..++++|+++.++.+. .++.+.
T Consensus       111 ~~~vG~--~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~--t~~~~~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~  185 (381)
T COG3391         111 SIPVGL--GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAA--TNKVTATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVS  185 (381)
T ss_pred             Eeeecc--CCceEEECCCCCEEEEEecccCCceEEEEeCC--CCeEEEEEecCCCc-ceEEECCCCCeEEEEecCCCeEE
Confidence            765444  6678999999987776655   5777777764  33333333332234 8899999999776655 678999


Q ss_pred             EEEcccceEEE-----EEEcCccEEEEEEcCCCcEEEEEECC---CeEEEEeCCCCceEEE-EecCCCccEEEEEEcCCC
Q psy17610        279 LWDLIKSTRLI-----IMILPSMIMSAAYHPSEVQLITCSTN---KMIDYWETCDGSIIRS-LEGSDVAAVNCVDFVDDG  349 (515)
Q Consensus       279 iwd~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~---~~i~~~d~~~~~~~~~-~~~~~~~~i~~~~~~~~~  349 (515)
                      +.|........     ..........+.+.|++..+.+....   +.+...|..++..... ...... ....+..+|+|
T Consensus       186 vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~~~~~~~~-~~~~v~~~p~g  264 (381)
T COG3391         186 VIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTATDLPVGSG-APRGVAVDPAG  264 (381)
T ss_pred             EEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEeccccccC-CCCceeECCCC
Confidence            99977665553     13333456788999999977766554   5899999988887776 333322 45678999999


Q ss_pred             CEEEEEcC-CCeEEEEEccCCeeeeeccCCCC---CeeEEEECCC
Q psy17610        350 KYFLTGGA-DQIVKMWMYREGVPCFVGIGHAA---SITKIKISPD  390 (515)
Q Consensus       350 ~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~---~i~~~~~~~~  390 (515)
                      +.+.+... .+.+.+.|..+............   .+..+++.+.
T Consensus       265 ~~~yv~~~~~~~V~vid~~~~~v~~~~~~~~~~~~~~~~~~~~~~  309 (381)
T COG3391         265 KAAYVANSQGGTVSVIDGATDRVVKTGPTGNEALGEPVSIAISPL  309 (381)
T ss_pred             CEEEEEecCCCeEEEEeCCCCceeeeecccccccccceeccceee
Confidence            99888744 48899999988776665543332   3555555553

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=98.57  E-value=0.00013  Score=67.83  Aligned_cols=220  Identities=12%  Similarity=0.082  Sum_probs=115.4

Q ss_pred             CccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEE
Q psy17610        123 HTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKF  202 (515)
Q Consensus       123 h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~  202 (515)
                      ..-....+.++|+|+.+++ +.+|...|+.....+...     .+.....+|.+.+ .+|+-...+.|.++.--..+...
T Consensus        31 ~~~~p~~ls~npngr~v~V-~g~geY~iyt~~~~r~k~-----~G~g~~~vw~~~n-~yAv~~~~~~I~I~kn~~~~~~k  103 (443)
T PF04053_consen   31 CEIYPQSLSHNPNGRFVLV-CGDGEYEIYTALAWRNKA-----FGSGLSFVWSSRN-RYAVLESSSTIKIYKNFKNEVVK  103 (443)
T ss_dssp             -SS--SEEEE-TTSSEEEE-EETTEEEEEETTTTEEEE-----EEE-SEEEE-TSS-EEEEE-TTS-EEEEETTEE-TT-
T ss_pred             CCcCCeeEEECCCCCEEEE-EcCCEEEEEEccCCcccc-----cCceeEEEEecCc-cEEEEECCCeEEEEEcCccccce
Confidence            3445789999999977777 778988888854433322     1333557888854 57777778889996322222212


Q ss_pred             EecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEc
Q psy17610        203 IIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDL  282 (515)
Q Consensus       203 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~  282 (515)
                      .+..+  ..+..+-.   |..|+..+. +.|.+||+.  +...+..+...  +|..+.|++++++++..+.+ .+.+++.
T Consensus       104 ~i~~~--~~~~~If~---G~LL~~~~~-~~i~~yDw~--~~~~i~~i~v~--~vk~V~Ws~~g~~val~t~~-~i~il~~  172 (443)
T PF04053_consen  104 SIKLP--FSVEKIFG---GNLLGVKSS-DFICFYDWE--TGKLIRRIDVS--AVKYVIWSDDGELVALVTKD-SIYILKY  172 (443)
T ss_dssp             ----S--S-EEEEE----SSSEEEEET-TEEEEE-TT--T--EEEEESS---E-EEEEE-TTSSEEEEE-S--SEEEEEE
T ss_pred             EEcCC--cccceEEc---CcEEEEECC-CCEEEEEhh--HcceeeEEecC--CCcEEEEECCCCEEEEEeCC-eEEEEEe
Confidence            22112  22333333   777776655 489999994  45556555432  48999999999999988866 6788776


Q ss_pred             ccc------------eEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCC
Q psy17610        283 IKS------------TRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGK  350 (515)
Q Consensus       283 ~~~------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~  350 (515)
                      ...            ...........|.+.+|..+  .++-.+.. .++.+--.....+..+.    .++.-+.+.|..+
T Consensus       173 ~~~~~~~~~~~g~e~~f~~~~E~~~~IkSg~W~~d--~fiYtT~~-~lkYl~~Ge~~~i~~ld----~~~yllgy~~~~~  245 (443)
T PF04053_consen  173 NLEAVAAIPEEGVEDAFELIHEISERIKSGCWVED--CFIYTTSN-HLKYLVNGETGIIAHLD----KPLYLLGYLPKEN  245 (443)
T ss_dssp             -HHHHHHBTTTB-GGGEEEEEEE-S--SEEEEETT--EEEEE-TT-EEEEEETTEEEEEEE-S----S--EEEEEETTTT
T ss_pred             cchhcccccccCchhceEEEEEecceeEEEEEEcC--EEEEEcCC-eEEEEEcCCcceEEEcC----CceEEEEEEccCC
Confidence            544            22333333677888888876  44444444 66553221112223332    4555666777666


Q ss_pred             EEEEEcCCCeEEEEEcc
Q psy17610        351 YFLTGGADQIVKMWMYR  367 (515)
Q Consensus       351 ~l~~~~~dg~i~i~d~~  367 (515)
                      .+.....|+.+..+.+.
T Consensus       246 ~ly~~Dr~~~v~~~~ld  262 (443)
T PF04053_consen  246 RLYLIDRDGNVISYELD  262 (443)
T ss_dssp             EEEEE-TT--EEEEE--
T ss_pred             EEEEEECCCCEEEEEEC
Confidence            77777777777777664

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=98.55  E-value=0.00019  Score=63.55  Aligned_cols=230  Identities=15%  Similarity=0.160  Sum_probs=135.2

Q ss_pred             cCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEE--------
Q psy17610         91 PVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRI--------  162 (515)
Q Consensus        91 ~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~--------  162 (515)
                      ..++.|+.|+.+| +++++...........  +..+|..+...|+-+.+++-+ |+.+.++++.........        
T Consensus         5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~--~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~   80 (275)
T PF00780_consen    5 SWGDRLLVGTEDG-LYVYDLSDPSKPTRIL--KLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKS   80 (275)
T ss_pred             cCCCEEEEEECCC-EEEEEecCCccceeEe--ecceEEEEEEecccCEEEEEc-CCccEEEEchhhcccccccccccccc
Confidence            3678999999998 9999994433444443  334499999999876766665 599999998865443311        


Q ss_pred             ------EecCeEEEEEE--EeeCCCEEEEEeCCCeEEEEecCCC-----ceEEEecCCCCCCeEEEEEcCCCCEEEEecC
Q psy17610        163 ------SVMNMICACIV--FTYDGKAILSGWNDGFIRCFTPQSG-----KLKFIIPNAHNRGVTALAITQDGTRLLSGGG  229 (515)
Q Consensus       163 ------~~~~~~v~~~~--~~~~~~~l~~~~~dg~i~~~~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  229 (515)
                            ......+...+  -...+...++......|.+|.....     +...++  .-...+..++|.  ++.++.|..
T Consensus        81 ~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~--~lp~~~~~i~~~--~~~i~v~~~  156 (275)
T PF00780_consen   81 RSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEI--SLPDPPSSIAFL--GNKICVGTS  156 (275)
T ss_pred             ccccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEE--EcCCCcEEEEEe--CCEEEEEeC
Confidence                  01112233333  1123333344444558888877653     344444  345778999998  456777765


Q ss_pred             CCcEEEEEccCCceeeEEeeccc----------cCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEE--EEEEcCccE
Q psy17610        230 EGQVRIWKLTRESQSLQCVLKEH----------TSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRL--IIMILPSMI  297 (515)
Q Consensus       230 d~~i~iw~~~~~~~~~~~~~~~~----------~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~--~~~~~~~~~  297 (515)
                      + ...+.|+.+............          ..++..+.. +++.+|++-  +..-.+.|. .|++.  ..+.-+..+
T Consensus       157 ~-~f~~idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~Ll~~--~~~g~fv~~-~G~~~r~~~i~W~~~p  231 (275)
T PF00780_consen  157 K-GFYLIDLNTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQL-SDNEFLLCY--DNIGVFVNK-NGEPSRKSTIQWSSAP  231 (275)
T ss_pred             C-ceEEEecCCCCceEEeCccCCcchhhhcccCCCceEEEEe-CCceEEEEe--cceEEEEcC-CCCcCcccEEEcCCch
Confidence            4 478888864433333221111          123333333 344555542  333333343 33332  344445556


Q ss_pred             EEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCC
Q psy17610        298 MSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSD  336 (515)
Q Consensus       298 ~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~  336 (515)
                      .++++.  ..++++... +.|.++++.+++.++.+..+.
T Consensus       232 ~~~~~~--~pyli~~~~-~~iEV~~~~~~~lvQ~i~~~~  267 (275)
T PF00780_consen  232 QSVAYS--SPYLIAFSS-NSIEVRSLETGELVQTIPLPN  267 (275)
T ss_pred             hEEEEE--CCEEEEECC-CEEEEEECcCCcEEEEEECCC
Confidence            666663  346666555 559999999999999888653

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=98.55  E-value=0.0003  Score=59.63  Aligned_cols=198  Identities=12%  Similarity=0.164  Sum_probs=116.9

Q ss_pred             ecCeEEEEEEEeeCCCE-EEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCc
Q psy17610        164 VMNMICACIVFTYDGKA-ILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRES  242 (515)
Q Consensus       164 ~~~~~v~~~~~~~~~~~-l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~  242 (515)
                      +-...+..++|.|+.+. +++....+.|..++. +|+.+..++..-.+....+++..++.++++.-.++.+.++++...+
T Consensus        19 g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~~~~   97 (248)
T PF06977_consen   19 GILDELSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTIDDDT   97 (248)
T ss_dssp             T--S-EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE----
T ss_pred             CccCCccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEEeccc
Confidence            34446899999998664 555666788888886 4778777755555778999999888777776678999999984322


Q ss_pred             e----eeEEe----ec-cccCceEEEEEecCCCEEEEEeCCCcEEEEEccc---ceEEEEEE---------cCccEEEEE
Q psy17610        243 Q----SLQCV----LK-EHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIK---STRLIIMI---------LPSMIMSAA  301 (515)
Q Consensus       243 ~----~~~~~----~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~---~~~~~~~~---------~~~~~~~~~  301 (515)
                      .    .....    +. .+...+..++|++.++.|+.+-+..-..++.+..   ........         .-..+.++.
T Consensus        98 ~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S~l~  177 (248)
T PF06977_consen   98 TSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLSGLS  177 (248)
T ss_dssp             TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS---EEE
T ss_pred             cccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceeccccceE
Confidence            1    11111    11 3455689999999988888888777777777654   22222211         112478899


Q ss_pred             EcCCC-cEEEEEECCCeEEEEeCCCCceEEEEecCC--------CccEEEEEEcCCCCEEEEEcCCCeEEEE
Q psy17610        302 YHPSE-VQLITCSTNKMIDYWETCDGSIIRSLEGSD--------VAAVNCVDFVDDGKYFLTGGADQIVKMW  364 (515)
Q Consensus       302 ~~~~~-~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~--------~~~i~~~~~~~~~~~l~~~~~dg~i~i~  364 (515)
                      ++|.. .+++....+..+..+| .+|+.+..+....        ....-.++|.++|++.++. +-+..++|
T Consensus       178 ~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIvs-EpNlfy~f  247 (248)
T PF06977_consen  178 YDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIVS-EPNLFYRF  247 (248)
T ss_dssp             EETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEEE-TTTEEEEE
T ss_pred             EcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEEEc-CCceEEEe
Confidence            99965 5556666788888899 6777776665432        1346789999999755554 55555554

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=98.54  E-value=0.00011  Score=67.16  Aligned_cols=271  Identities=10%  Similarity=0.044  Sum_probs=140.4

Q ss_pred             CeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecC--------C
Q psy17610        126 AIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQ--------S  197 (515)
Q Consensus       126 ~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~--------~  197 (515)
                      .|+.+.|.++...|+++...|.|.||.....+.-.  .....+-..+.+.+-      ...++.-.+-|+.        .
T Consensus         3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~--~~~~~~~~~~~~~~~------~~~~~~~~l~di~~r~~~~~~~   74 (395)
T PF08596_consen    3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYG--NREQPPDLDYNFRRF------SLNNSPGKLTDISDRAPPSLKE   74 (395)
T ss_dssp             -EEEEEEETTTTEEEEEETTS-EEEEEEEE--------------------S--------GGGSS-SEEE-GGG--TT-SE
T ss_pred             eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCC--ccCCCcccCcccccc------cccCCCcceEEehhhCCccccc
Confidence            48899999998899999999999999876543221  000011111111110      0001111122221        1


Q ss_pred             CceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeecc------ccCceEEEEEec-----CC-
Q psy17610        198 GKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKE------HTSSVSVIQIKS-----DS-  265 (515)
Q Consensus       198 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~------~~~~v~~~~~~~-----~~-  265 (515)
                      |-....+.....++|++++.+.- .+++.|.++|.+.|.|++...--+...+..      ....++++.|..     |+ 
T Consensus        75 gf~P~~l~~~~~g~vtal~~S~i-GFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~y  153 (395)
T PF08596_consen   75 GFLPLTLLDAKQGPVTALKNSDI-GFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGY  153 (395)
T ss_dssp             EEEEEEEE---S-SEEEEEE-BT-SEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSS
T ss_pred             ccCchhheeccCCcEeEEecCCC-cEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcc
Confidence            22222333556899999999854 489999999999999997544333333333      344677888862     22 


Q ss_pred             --CEEEEEeCCCcEEEEEccc---ce----EEEEE-EcCccEEEEE-EcCC--------------------CcEEEEEEC
Q psy17610        266 --KEAMSASTDGTCVLWDLIK---ST----RLIIM-ILPSMIMSAA-YHPS--------------------EVQLITCST  314 (515)
Q Consensus       266 --~~l~~~~~d~~i~iwd~~~---~~----~~~~~-~~~~~~~~~~-~~~~--------------------~~~l~~~~~  314 (515)
                        -.+++|...|.+.+|.+.-   +.    ..... ....++..+. ++.+                    -..+++...
T Consensus       154 SSi~L~vGTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvS  233 (395)
T PF08596_consen  154 SSICLLVGTNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVS  233 (395)
T ss_dssp             EEEEEEEEETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-
T ss_pred             cceEEEEEeCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEc
Confidence              3588899999999998742   11    11111 2334444443 2221                    113455566


Q ss_pred             CCeEEEEeCCCCceEEEEecCCCccEEEEEE-----cCCCCEEEEEcCCCeEEEEEccCCeeeeeccCC----CCCeeEE
Q psy17610        315 NKMIDYWETCDGSIIRSLEGSDVAAVNCVDF-----VDDGKYFLTGGADQIVKMWMYREGVPCFVGIGH----AASITKI  385 (515)
Q Consensus       315 ~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~-----~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~----~~~i~~~  385 (515)
                      +..++++...+.+...+..... .....+.+     ...+..|++-..+|.+++|.+..-+.+....-.    ...+...
T Consensus       234 e~~irv~~~~~~k~~~K~~~~~-~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~~~~d~~~~~~s  312 (395)
T PF08596_consen  234 ESDIRVFKPPKSKGAHKSFDDP-FLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLPPPLDSRRLSSS  312 (395)
T ss_dssp             SSEEEEE-TT---EEEEE-SS--EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-SS---HHHHTT-
T ss_pred             ccceEEEeCCCCcccceeeccc-cccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhcccCCCcccccccccc
Confidence            7889999998888776665321 23333444     235677888899999999999988777665442    2345567


Q ss_pred             EECCCCcEEEEEeCCCcEEEEe
Q psy17610        386 KISPDKKVIVSVSADGGIFLWT  407 (515)
Q Consensus       386 ~~~~~~~~l~~~~~dg~i~iw~  407 (515)
                      .++++|..++-.+.. .+.++.
T Consensus       313 sis~~Gdi~~~~gps-E~~l~s  333 (395)
T PF08596_consen  313 SISRNGDIFYWTGPS-EIQLFS  333 (395)
T ss_dssp             EE-TTS-EEEE-SSS-EEEEEE
T ss_pred             EECCCCCEEEEeCcc-cEEEEE
Confidence            788899877766443 444443

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=98.51  E-value=0.00059  Score=63.47  Aligned_cols=245  Identities=11%  Similarity=0.103  Sum_probs=128.8

Q ss_pred             eEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceE-----EEEEec
Q psy17610        189 FIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVS-----VIQIKS  263 (515)
Q Consensus       189 ~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~-----~~~~~~  263 (515)
                      .|.+|+.. |+.+..+.-.+ +.+.++.|+.+. .|++...||.+++||+.... ............|.     ...+..
T Consensus        62 ~I~iys~s-G~ll~~i~w~~-~~iv~~~wt~~e-~LvvV~~dG~v~vy~~~G~~-~fsl~~~i~~~~v~e~~i~~~~~~~  137 (410)
T PF04841_consen   62 SIQIYSSS-GKLLSSIPWDS-GRIVGMGWTDDE-ELVVVQSDGTVRVYDLFGEF-QFSLGEEIEEEKVLECRIFAIWFYK  137 (410)
T ss_pred             EEEEECCC-CCEeEEEEECC-CCEEEEEECCCC-eEEEEEcCCEEEEEeCCCce-eechhhhccccCcccccccccccCC
Confidence            48888854 45555553334 889999999865 56667789999999985322 11111011111222     222223


Q ss_pred             CCCEEEEEeCCCcEEEEEcccce-EEEEE-EcCccEE----------EEEEcCCCcEEEEEECCCeEEEEeCCCCceEEE
Q psy17610        264 DSKEAMSASTDGTCVLWDLIKST-RLIIM-ILPSMIM----------SAAYHPSEVQLITCSTNKMIDYWETCDGSIIRS  331 (515)
Q Consensus       264 ~~~~l~~~~~d~~i~iwd~~~~~-~~~~~-~~~~~~~----------~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~  331 (515)
                      +|  ++.-..++.+.+.+-.... ..... ..+....          ...+..+....+....++.+.+.+....+.   
T Consensus       138 ~G--ivvLt~~~~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~i~~~~g~~i~~i~~~~~~~---  212 (410)
T PF04841_consen  138 NG--IVVLTGNNRFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVEILLANGETIYIIDENSFKQ---  212 (410)
T ss_pred             CC--EEEECCCCeEEEEeCccccchhhccccCCCcccccccccccccceEeecCcceEEEEecCCEEEEEEcccccc---
Confidence            44  3333334444443322211 11111 1111100          022334444445555555565444332211   


Q ss_pred             EecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCC-CCCeeEEEECCCCcEEEEEeCCCcEEEEeCCC
Q psy17610        332 LEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGH-AASITKIKISPDKKVIVSVSADGGIFLWTFPE  410 (515)
Q Consensus       332 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~  410 (515)
                      +.  ..+++..+++||+|+++|.-..+|.+.+....-.+....+... ......|.|.-+...++.-  +..+.+.....
T Consensus       213 i~--~~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~dav~l~~--~~~l~lvg~~~  288 (410)
T PF04841_consen  213 ID--SDGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGNDAVVLSW--EDELLLVGPDG  288 (410)
T ss_pred             cc--CCCCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecCcCCCCcEEEEECCCcEEEEe--CCEEEEECCCC
Confidence            11  1268999999999999999999999999876555555554333 3456677776554333322  33455543211


Q ss_pred             CcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecc
Q psy17610        411 LEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEG  481 (515)
Q Consensus       411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~  481 (515)
                                                        ..+.|.-++..++..-.|| +||..-.+-+.++..+.
T Consensus       289 ----------------------------------~~~~~~~~~~~~l~~E~DG-~riit~~~~~~l~~Vp~  324 (410)
T PF04841_consen  289 ----------------------------------DSISFWYDGPVILVSEIDG-VRIITSTSHEFLQRVPD  324 (410)
T ss_pred             ----------------------------------CceEEeccCceEEeccCCc-eEEEeCCceEEEEECCH
Confidence                                              1123333444445555566 88887666666666553

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=98.50  E-value=3.1e-05  Score=71.50  Aligned_cols=207  Identities=16%  Similarity=0.128  Sum_probs=126.6

Q ss_pred             ceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec---C-CcEEEEeCCCCceeEEEEecCeEEEEEEEeeCC
Q psy17610        103 CEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS---K-NDIRIWSVRTLNELLRISVMNMICACIVFTYDG  178 (515)
Q Consensus       103 ~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~---d-~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~  178 (515)
                      ..+.+-|.+ |...... ..-...+..-+|+|+++.++....   . ..+.++++++++...... ..+.-...+|+|||
T Consensus       173 ~~l~~~D~d-g~~~~~l-~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~-~~g~~~~P~fspDG  249 (425)
T COG0823         173 YELALGDYD-GYNQQKL-TDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILN-FNGNNGAPAFSPDG  249 (425)
T ss_pred             ceEEEEccC-CcceeEe-cccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeec-cCCccCCccCCCCC
Confidence            345555555 3333333 224456778899999988777654   2 359999999887665554 23333557899999


Q ss_pred             CEEEEE-eCCC--eEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEec-CCCcEEEEEccCCceeeEEeeccccC
Q psy17610        179 KAILSG-WNDG--FIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGG-GEGQVRIWKLTRESQSLQCVLKEHTS  254 (515)
Q Consensus       179 ~~l~~~-~~dg--~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iw~~~~~~~~~~~~~~~~~~  254 (515)
                      +.|+.. ..||  .|.+.|+.+++... + ..-.+.-..-.|+|+|+.++..+ ..|.-.||-.+.+....... .....
T Consensus       250 ~~l~f~~~rdg~~~iy~~dl~~~~~~~-L-t~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~ri-T~~~~  326 (425)
T COG0823         250 SKLAFSSSRDGSPDIYLMDLDGKNLPR-L-TNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQVTRL-TFSGG  326 (425)
T ss_pred             CEEEEEECCCCCccEEEEcCCCCccee-c-ccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCceeEe-eccCC
Confidence            988754 4455  46677888777444 3 22222233668999999888654 44554554443233322222 21222


Q ss_pred             ceEEEEEecCCCEEEEEeCC-Cc--EEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECC
Q psy17610        255 SVSVIQIKSDSKEAMSASTD-GT--CVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTN  315 (515)
Q Consensus       255 ~v~~~~~~~~~~~l~~~~~d-~~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  315 (515)
                      .-..-.|+|||++++..+.. |.  |.+.|+.++...+.+..........+.++++.+...+..
T Consensus       327 ~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~~~~lt~~~~~e~ps~~~ng~~i~~~s~~  390 (425)
T COG0823         327 GNSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGGKIRILTSTYLNESPSWAPNGRMIMFSSGQ  390 (425)
T ss_pred             CCcCccCCCCCCEEEEEeccCCceeeEEeccCCCCcEEEccccccCCCCCcCCCCceEEEeccC
Confidence            22267789999999887753 43  666777666655555555555666778888777665443

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=98.49  E-value=0.00037  Score=61.65  Aligned_cols=229  Identities=17%  Similarity=0.193  Sum_probs=132.9

Q ss_pred             CCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEE---------
Q psy17610        219 QDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLI---------  289 (515)
Q Consensus       219 ~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~---------  289 (515)
                      ..++.|+.|+.+| +.+++... ........  +...|..+...++-+.+++-+ |+.+.++++.......         
T Consensus         5 ~~~~~L~vGt~~G-l~~~~~~~-~~~~~~i~--~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~   79 (275)
T PF00780_consen    5 SWGDRLLVGTEDG-LYVYDLSD-PSKPTRIL--KLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPK   79 (275)
T ss_pred             cCCCEEEEEECCC-EEEEEecC-CccceeEe--ecceEEEEEEecccCEEEEEc-CCccEEEEchhhccccccccccccc
Confidence            3577899998888 89998821 12222222  233499999999877777665 4999999987654443         


Q ss_pred             ------EEEcCccEEEEE--EcCCCcEEEEEECCCeEEEEeCCCC-----ceEEEEecCCCccEEEEEEcCCCCEEEEEc
Q psy17610        290 ------IMILPSMIMSAA--YHPSEVQLITCSTNKMIDYWETCDG-----SIIRSLEGSDVAAVNCVDFVDDGKYFLTGG  356 (515)
Q Consensus       290 ------~~~~~~~~~~~~--~~~~~~~l~~~~~~~~i~~~d~~~~-----~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~  356 (515)
                            .......+...+  -...+...++......|.+|.....     +..+++..+  ..+..++|.  ++.++.|.
T Consensus        80 ~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~lp--~~~~~i~~~--~~~i~v~~  155 (275)
T PF00780_consen   80 SRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEISLP--DPPSSIAFL--GNKICVGT  155 (275)
T ss_pred             cccccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEEcC--CCcEEEEEe--CCEEEEEe
Confidence                  122222344444  2233444444445558888776552     456666665  678889998  55777777


Q ss_pred             CCCeEEEEEccCCeeeeeccCC------------CCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCccccee
Q psy17610        357 ADQIVKMWMYREGVPCFVGIGH------------AASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSK  424 (515)
Q Consensus       357 ~dg~i~i~d~~~~~~~~~~~~~------------~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~  424 (515)
                      .+ ...+.|+.++.....+...            ..++..+... ++.+|++.  |..-.+-+......           
T Consensus       156 ~~-~f~~idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~e~Ll~~--~~~g~fv~~~G~~~-----------  220 (275)
T PF00780_consen  156 SK-GFYLIDLNTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQLS-DNEFLLCY--DNIGVFVNKNGEPS-----------  220 (275)
T ss_pred             CC-ceEEEecCCCCceEEeCccCCcchhhhcccCCCceEEEEeC-CceEEEEe--cceEEEEcCCCCcC-----------
Confidence            55 4778899876544333111            1233333343 34555543  22222333322100           


Q ss_pred             eecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccc
Q psy17610        425 ISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSD  483 (515)
Q Consensus       425 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~  483 (515)
                               +......+..+.++++  ..++|++... +.|.||++.++++++.+....
T Consensus       221 ---------r~~~i~W~~~p~~~~~--~~pyli~~~~-~~iEV~~~~~~~lvQ~i~~~~  267 (275)
T PF00780_consen  221 ---------RKSTIQWSSAPQSVAY--SSPYLIAFSS-NSIEVRSLETGELVQTIPLPN  267 (275)
T ss_pred             ---------cccEEEcCCchhEEEE--ECCEEEEECC-CEEEEEECcCCcEEEEEECCC
Confidence                     0001111223455555  3457777665 459999999999999988753

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=98.47  E-value=3.7e-05  Score=71.00  Aligned_cols=203  Identities=16%  Similarity=0.168  Sum_probs=126.3

Q ss_pred             cEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEe---CC-CeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCC
Q psy17610        147 DIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGW---ND-GFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGT  222 (515)
Q Consensus       147 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d-g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  222 (515)
                      .+.+-|.+ +.....+......+..-.|+|+++.++...   .. ..+.++++++++......  ....-..-+|+|||+
T Consensus       174 ~l~~~D~d-g~~~~~l~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~--~~g~~~~P~fspDG~  250 (425)
T COG0823         174 ELALGDYD-GYNQQKLTDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILN--FNGNNGAPAFSPDGS  250 (425)
T ss_pred             eEEEEccC-CcceeEecccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeec--cCCccCCccCCCCCC
Confidence            34455544 556666666666778889999998766442   23 468999999887665542  233334568999998


Q ss_pred             EEEE-ecCCCcEEE--EEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCC-C--cEEEEEcccceEEEEEEcCcc
Q psy17610        223 RLLS-GGGEGQVRI--WKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTD-G--TCVLWDLIKSTRLIIMILPSM  296 (515)
Q Consensus       223 ~l~~-~~~d~~i~i--w~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~--~i~iwd~~~~~~~~~~~~~~~  296 (515)
                      .|+. ...||...+  .|+....   ...+....+.-..-.|+|||+.++..+.. |  .|.+.+.+.............
T Consensus       251 ~l~f~~~rdg~~~iy~~dl~~~~---~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~riT~~~~~  327 (425)
T COG0823         251 KLAFSSSRDGSPDIYLMDLDGKN---LPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQVTRLTFSGGG  327 (425)
T ss_pred             EEEEEECCCCCccEEEEcCCCCc---ceecccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCceeEeeccCCC
Confidence            8774 455665555  4554333   22233223333366789999999877653 3  466777766665444433333


Q ss_pred             EEEEEEcCCCcEEEEEECC-Ce--EEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcC
Q psy17610        297 IMSAAYHPSEVQLITCSTN-KM--IDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA  357 (515)
Q Consensus       297 ~~~~~~~~~~~~l~~~~~~-~~--i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~  357 (515)
                      -..-.++|+|++++..+.. |.  |.+.|+.++...+.+...  .....-.+.++|+.+...+.
T Consensus       328 ~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~~~~lt~~--~~~e~ps~~~ng~~i~~~s~  389 (425)
T COG0823         328 NSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGGKIRILTST--YLNESPSWAPNGRMIMFSSG  389 (425)
T ss_pred             CcCccCCCCCCEEEEEeccCCceeeEEeccCCCCcEEEcccc--ccCCCCCcCCCCceEEEecc
Confidence            3377899999999887743 33  667777666644433322  23334567788877765543

>KOG1008|consensus

Probab=98.43  E-value=1.9e-07  Score=85.31  Aligned_cols=199  Identities=13%  Similarity=0.180  Sum_probs=131.5

Q ss_pred             CCeEEEEEcCC--CCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEec-CCCEEEEEe----CCCcEEEEEc
Q psy17610        210 RGVTALAITQD--GTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKS-DSKEAMSAS----TDGTCVLWDL  282 (515)
Q Consensus       210 ~~v~~~~~~~~--~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~----~d~~i~iwd~  282 (515)
                      ..+.|+++..+  ...+++|..+|.|.+-..+..........+++..+.++++|++ |.+.|++|-    .|..+.+||+
T Consensus        57 qy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi  136 (783)
T KOG1008|consen   57 QYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDI  136 (783)
T ss_pred             CCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccceec
Confidence            44566666553  3467889999999999887554444556678889999999987 445555553    2567999999


Q ss_pred             ccc--eEEEEE--E--cCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCC-ceEEEEecCCCccEEEEEEcC-CCCEEEE
Q psy17610        283 IKS--TRLIIM--I--LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDG-SIIRSLEGSDVAAVNCVDFVD-DGKYFLT  354 (515)
Q Consensus       283 ~~~--~~~~~~--~--~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~-~~~~~~~~~~~~~i~~~~~~~-~~~~l~~  354 (515)
                      .+.  .+....  .  ......+++|..+.+.+++|.....+.++|++.. .....+..   ..+..+...| .+.++++
T Consensus       137 ~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~svnT---k~vqG~tVdp~~~nY~cs  213 (783)
T KOG1008|consen  137 NSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVSSVNT---KYVQGITVDPFSPNYFCS  213 (783)
T ss_pred             ccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhhhhhhhhhhh---hhcccceecCCCCCceec
Confidence            876  222111  1  1224568888888999999999999999998733 22222221   3455677788 6677766


Q ss_pred             EcCCCeEEEEE-ccCC-eeeeeccCCC----CCeeEEEECCCC-cEEEEEeC-CCcEEEEeCCCCc
Q psy17610        355 GGADQIVKMWM-YREG-VPCFVGIGHA----ASITKIKISPDK-KVIVSVSA-DGGIFLWTFPELE  412 (515)
Q Consensus       355 ~~~dg~i~i~d-~~~~-~~~~~~~~~~----~~i~~~~~~~~~-~~l~~~~~-dg~i~iw~~~~~~  412 (515)
                      -. ||.|.+|| ..+- .++..+...+    ..+..++|.|.. ..+++... .++|+++++....
T Consensus       214 ~~-dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~~v~  278 (783)
T KOG1008|consen  214 NS-DGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDICVVG  278 (783)
T ss_pred             cc-cCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEecccccC
Confidence            65 99999999 3332 2222222222    248999999943 34555554 5789999987543

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=98.43  E-value=0.0017  Score=61.30  Aligned_cols=245  Identities=11%  Similarity=0.080  Sum_probs=134.0

Q ss_pred             CeEEEEeCCCCcEEEEEec-CC----cEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCC-----------e
Q psy17610        126 AIYDLQFPVNFSSVFATCS-KN----DIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDG-----------F  189 (515)
Q Consensus       126 ~v~~~~~~~~~~~l~~~~~-d~----~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----------~  189 (515)
                      .+....++|+|++++.+-+ .|    .+++.|+++++.+...-.. .....+.|.++++.|+....+.           .
T Consensus       125 ~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~-~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~  203 (414)
T PF02897_consen  125 SLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIEN-PKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQ  203 (414)
T ss_dssp             EEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEE-EESEEEEECTTSSEEEEEECSTTTSS-CCGCCEE
T ss_pred             EeeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCcccc-cccceEEEeCCCCEEEEEEeCcccccccCCCCcE
Confidence            3446789999999887744 34    4999999999766532111 1123399999998877665332           3


Q ss_pred             EEEEecCCCceE--EEecCCCCCC-eEEEEEcCCCCEEEEecC---C-CcEEEEEccCC---ceeeEEeeccccCceEEE
Q psy17610        190 IRCFTPQSGKLK--FIIPNAHNRG-VTALAITQDGTRLLSGGG---E-GQVRIWKLTRE---SQSLQCVLKEHTSSVSVI  259 (515)
Q Consensus       190 i~~~~~~~~~~~--~~~~~~~~~~-v~~~~~~~~~~~l~~~~~---d-~~i~iw~~~~~---~~~~~~~~~~~~~~v~~~  259 (515)
                      |..|.+.+....  ..+....... ...+..++++++++....   + ..+.+.++...   ......... ....+...
T Consensus       204 v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~-~~~~~~~~  282 (414)
T PF02897_consen  204 VYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSP-REDGVEYY  282 (414)
T ss_dssp             EEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEE-SSSS-EEE
T ss_pred             EEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeC-CCCceEEE
Confidence            788888776432  2332222233 678889999998875432   2 35677777543   223333333 33333332


Q ss_pred             EEecCCCEEEEEeC---CCcEEEEEcccce---EE-EEEEcCccEEEEEEcCCCcEEEEEE-CCC--eEEEEeCCCCceE
Q psy17610        260 QIKSDSKEAMSAST---DGTCVLWDLIKST---RL-IIMILPSMIMSAAYHPSEVQLITCS-TNK--MIDYWETCDGSII  329 (515)
Q Consensus       260 ~~~~~~~~l~~~~~---d~~i~iwd~~~~~---~~-~~~~~~~~~~~~~~~~~~~~l~~~~-~~~--~i~~~d~~~~~~~  329 (515)
                      .-+..+.+++....   .+.|...++....   .. ..+.......-..+...+.+|+... .++  .|+++++..+...
T Consensus       283 v~~~~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~Lvl~~~~~~~~~l~v~~~~~~~~~  362 (414)
T PF02897_consen  283 VDHHGDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSLFKDYLVLSYRENGSSRLRVYDLDDGKES  362 (414)
T ss_dssp             EEEETTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEEETTEEEEEEEETTEEEEEEEETT-TEEE
T ss_pred             EEccCCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEEECCEEEEEEEECCccEEEEEECCCCcEE
Confidence            22233334443322   3567777776654   22 3333333333333334455555443 333  5888999856666


Q ss_pred             EEEecCCCccEEEEEEcCCCCEEEEE--c--CCCeEEEEEccCCeee
Q psy17610        330 RSLEGSDVAAVNCVDFVDDGKYFLTG--G--ADQIVKMWMYREGVPC  372 (515)
Q Consensus       330 ~~~~~~~~~~i~~~~~~~~~~~l~~~--~--~dg~i~i~d~~~~~~~  372 (515)
                      ..+.....+.+..+...++++.+...  +  .-+++..||+.+++..
T Consensus       363 ~~~~~p~~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~~~~  409 (414)
T PF02897_consen  363 REIPLPEAGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATGELT  409 (414)
T ss_dssp             EEEESSSSSEEEEEES-TT-SEEEEEEEETTEEEEEEEEETTTTCEE
T ss_pred             eeecCCcceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCCCEE
Confidence            66666655666776666665544332  2  1356888888877543

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=98.41  E-value=0.00039  Score=62.98  Aligned_cols=214  Identities=16%  Similarity=0.149  Sum_probs=126.6

Q ss_pred             CeEEEEecCCCceEEEecCCCCCCeEEEEE---cCC----CCEEEEecC---------C-CcEEEEEccCC-----ceee
Q psy17610        188 GFIRCFTPQSGKLKFIIPNAHNRGVTALAI---TQD----GTRLLSGGG---------E-GQVRIWKLTRE-----SQSL  245 (515)
Q Consensus       188 g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~----~~~l~~~~~---------d-~~i~iw~~~~~-----~~~~  245 (515)
                      ..|++.|..+.+.+..+.......+.+++.   ..+    ..++++|+.         . |.|.++++...     ..+.
T Consensus         2 s~i~l~d~~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~   81 (321)
T PF03178_consen    2 SSIRLVDPTTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKL   81 (321)
T ss_dssp             -EEEEEETTTSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEE
T ss_pred             cEEEEEeCCCCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEE
Confidence            358888888888776665444555565544   322    457776643         2 88999999753     2222


Q ss_pred             EEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccce-EEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCC
Q psy17610        246 QCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKST-RLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETC  324 (515)
Q Consensus       246 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~  324 (515)
                      ... ....++|.+++-- + .+++.+. .+.|.+|++...+ .......+.+.........++++++|.....+.++...
T Consensus        82 i~~-~~~~g~V~ai~~~-~-~~lv~~~-g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~~~~I~vgD~~~sv~~~~~~  157 (321)
T PF03178_consen   82 IHS-TEVKGPVTAICSF-N-GRLVVAV-GNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVFKNYILVGDAMKSVSLLRYD  157 (321)
T ss_dssp             EEE-EEESS-EEEEEEE-T-TEEEEEE-TTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEETTEEEEEESSSSEEEEEEE
T ss_pred             EEE-EeecCcceEhhhh-C-CEEEEee-cCEEEEEEccCcccchhhheecceEEEEEEeccccEEEEEEcccCEEEEEEE
Confidence            222 2347788888766 3 3444444 4689999998877 55544444433333334446699999988888877443


Q ss_pred             C--CceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccC-------Ce--ee--eeccCCCCCeeEE---EEC
Q psy17610        325 D--GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYRE-------GV--PC--FVGIGHAASITKI---KIS  388 (515)
Q Consensus       325 ~--~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~-------~~--~~--~~~~~~~~~i~~~---~~~  388 (515)
                      .  .+....-.......+.++.+-++++.++++..+|.+.++....       +.  ..  ..+ .....|+++   .+.
T Consensus       158 ~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f-~lg~~v~~~~~~~l~  236 (321)
T PF03178_consen  158 EENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNPEIPNSRDGDPKLERISSF-HLGDIVNSFRRGSLI  236 (321)
T ss_dssp             TTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-SS-SSTTTTTTBEEEEEEE-E-SS-EEEEEE--SS
T ss_pred             ccCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECCCCcccccccccceeEEEE-ECCCccceEEEEEee
Confidence            3  2233322333346688888886667999999999999998763       11  11  222 234567777   545


Q ss_pred             CC--C------cEEEEEeCCCcEEEE
Q psy17610        389 PD--K------KVIVSVSADGGIFLW  406 (515)
Q Consensus       389 ~~--~------~~l~~~~~dg~i~iw  406 (515)
                      |.  +      ..++.++.+|.|...
T Consensus       237 ~~~~~~~~~~~~~i~~~T~~G~Ig~l  262 (321)
T PF03178_consen  237 PRSGSSESPNRPQILYGTVDGSIGVL  262 (321)
T ss_dssp             --SSSS-TTEEEEEEEEETTS-EEEE
T ss_pred             ecCCCCcccccceEEEEecCCEEEEE
Confidence            51  2      247778899998843

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=98.40  E-value=0.0018  Score=59.98  Aligned_cols=281  Identities=11%  Similarity=0.116  Sum_probs=176.8

Q ss_pred             EEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCC-CcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEE
Q psy17610        190 IRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGE-GQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEA  268 (515)
Q Consensus       190 i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  268 (515)
                      +.+++..+.+....+. .+ .....+...+++..+...... ..+...+..  ..........-...-..++.++.+..+
T Consensus        13 ~~v~~~~~~~~~~~~~-~~-~~~~~v~~~~~g~~~~v~~~~~~~~~~~~~~--~n~~~~~~~~g~~~p~~i~v~~~~~~v   88 (381)
T COG3391          13 VSVINTGTNKVTAAIS-LG-RGPGGVAVNPDGTQVYVANSGSNDVSVIDAT--SNTVTQSLSVGGVYPAGVAVNPAGNKV   88 (381)
T ss_pred             eEEEeecccEEEEEee-cC-CCCceeEEcCccCEEEEEeecCceeeecccc--cceeeeeccCCCccccceeeCCCCCeE
Confidence            5556555555544442 12 245677788887555444322 234444432  111111111111334567788888755


Q ss_pred             E-EEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEEC---CCeEEEEeCCCCceEEEEecCCCccEEEEE
Q psy17610        269 M-SASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCST---NKMIDYWETCDGSIIRSLEGSDVAAVNCVD  344 (515)
Q Consensus       269 ~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~  344 (515)
                      + ....+..|.+.|..+.+.............++++|+++.+.++..   ++.+.+.|..+.+......... .+ ..++
T Consensus        89 yv~~~~~~~v~vid~~~~~~~~~~~vG~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~-~P-~~~a  166 (381)
T COG3391          89 YVTTGDSNTVSVIDTATNTVLGSIPVGLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGN-TP-TGVA  166 (381)
T ss_pred             EEecCCCCeEEEEcCcccceeeEeeeccCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCC-Cc-ceEE
Confidence            4 444568999999888888888877778889999999988877766   6899999999999988865543 34 7899


Q ss_pred             EcCCCCEEEEEc-CCCeEEEEEccCCeeee-e---ccCCCCCeeEEEECCCCcEEEEEeCC---CcEEEEeCCCCcCccC
Q psy17610        345 FVDDGKYFLTGG-ADQIVKMWMYREGVPCF-V---GIGHAASITKIKISPDKKVIVSVSAD---GGIFLWTFPELEDDVG  416 (515)
Q Consensus       345 ~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~-~---~~~~~~~i~~~~~~~~~~~l~~~~~d---g~i~iw~~~~~~~~~~  416 (515)
                      ++|+|+.+++.. .++.+.+.|........ .   ...-......+.++|++.++......   +.+...|.........
T Consensus       167 ~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~  246 (381)
T COG3391         167 VDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTAT  246 (381)
T ss_pred             ECCCCCeEEEEecCCCeEEEEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEe
Confidence            999999666554 78899999976654442 1   11222344678999999977666543   4777777665431110


Q ss_pred             CCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeec-CCeEEEEecCCCeeeeeecccc--cceEEEEEEc
Q psy17610        417 DSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCST-NKMIDYWETCDGSIIRSLEGSD--VAAVNCVDFV  493 (515)
Q Consensus       417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~v~iwd~~~~~~~~~~~~~~--~~~v~~~~~s  493 (515)
                      ..                  ..... ....+..+|+|..+.+... .+.+.+-|..+...........  ...+..+++.
T Consensus       247 ~~------------------~~~~~-~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~~v~~~~~~~~~~~~~~~~~~~~  307 (381)
T COG3391         247 DL------------------PVGSG-APRGVAVDPAGKAAYVANSQGGTVSVIDGATDRVVKTGPTGNEALGEPVSIAIS  307 (381)
T ss_pred             cc------------------ccccC-CCCceeECCCCCEEEEEecCCCeEEEEeCCCCceeeeecccccccccceeccce
Confidence            00                  00011 2456788999998887744 4889999988877766654332  0234555554


Q ss_pred             CC
Q psy17610        494 DD  495 (515)
Q Consensus       494 ~~  495 (515)
                      +.
T Consensus       308 ~~  309 (381)
T COG3391         308 PL  309 (381)
T ss_pred             ee
Confidence            43

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=98.39  E-value=0.0014  Score=61.99  Aligned_cols=243  Identities=11%  Similarity=0.073  Sum_probs=133.5

Q ss_pred             EEEEEEecCCCEEEEEe-cC----ceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCC-----------c
Q psy17610         84 ISSLQYNPVNNKVFVGT-VN----CEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKN-----------D  147 (515)
Q Consensus        84 v~~~~~s~~~~~l~~~~-~d----~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~-----------~  147 (515)
                      +...++||+|+++|.+- ..    ..|+++|+++|+.+...+...  .-..+.|.++++.++....+.           .
T Consensus       126 ~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~--~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~  203 (414)
T PF02897_consen  126 LGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENP--KFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQ  203 (414)
T ss_dssp             EEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEE--ESEEEEECTTSSEEEEEECSTTTSS-CCGCCEE
T ss_pred             eeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCccccc--ccceEEEeCCCCEEEEEEeCcccccccCCCCcE
Confidence            34678999999998763 22    459999999986655443321  123499999998888776533           3


Q ss_pred             EEEEeCCCCcee--EEEEecCeE--EEEEEEeeCCCEEEEEeCC----CeEEEEecCCC----ceEEEecCCCCCCeEEE
Q psy17610        148 IRIWSVRTLNEL--LRISVMNMI--CACIVFTYDGKAILSGWND----GFIRCFTPQSG----KLKFIIPNAHNRGVTAL  215 (515)
Q Consensus       148 i~iw~~~~~~~~--~~~~~~~~~--v~~~~~~~~~~~l~~~~~d----g~i~~~~~~~~----~~~~~~~~~~~~~v~~~  215 (515)
                      |..|.+.+...-  ..+......  ...+..++|+++++.....    ..+.+.++..+    .....+.....+....+
T Consensus       204 v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~~~~~v  283 (414)
T PF02897_consen  204 VYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDGVEYYV  283 (414)
T ss_dssp             EEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS-EEEE
T ss_pred             EEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCceEEEE
Confidence            788888776543  334433332  5678889999988764432    35788888774    22333322223333333


Q ss_pred             EEcCCCCEEEEec---CCCcEEEEEccCCce-eeEEeeccccCceEEEEEecCCCEEEEE-eCCC--cEEEEEcccceEE
Q psy17610        216 AITQDGTRLLSGG---GEGQVRIWKLTRESQ-SLQCVLKEHTSSVSVIQIKSDSKEAMSA-STDG--TCVLWDLIKSTRL  288 (515)
Q Consensus       216 ~~~~~~~~l~~~~---~d~~i~iw~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~--~i~iwd~~~~~~~  288 (515)
                      ... .+.+++...   .++.|.-.++..... .....+..+...+.--.+...+.+|+.. ..++  .|+++++..+...
T Consensus       284 ~~~-~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~Lvl~~~~~~~~~l~v~~~~~~~~~  362 (414)
T PF02897_consen  284 DHH-GDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSLFKDYLVLSYRENGSSRLRVYDLDDGKES  362 (414)
T ss_dssp             EEE-TTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEEETTEEEEEEEETTEEEEEEEETT-TEEE
T ss_pred             Ecc-CCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEEECCEEEEEEEECCccEEEEEECCCCcEE
Confidence            333 443444332   345676677754432 1222445555533333333444555543 3343  5888998844555


Q ss_pred             EEEEcCc--cEEEEEEcCCCcEEEEE--EC--CCeEEEEeCCCCceE
Q psy17610        289 IIMILPS--MIMSAAYHPSEVQLITC--ST--NKMIDYWETCDGSII  329 (515)
Q Consensus       289 ~~~~~~~--~~~~~~~~~~~~~l~~~--~~--~~~i~~~d~~~~~~~  329 (515)
                      .....+.  .+..+...+++..+...  +.  -+.+..||+.+++..
T Consensus       363 ~~~~~p~~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~~~~  409 (414)
T PF02897_consen  363 REIPLPEAGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATGELT  409 (414)
T ss_dssp             EEEESSSSSEEEEEES-TT-SEEEEEEEETTEEEEEEEEETTTTCEE
T ss_pred             eeecCCcceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCCCEE
Confidence            5555443  34555545555544332  22  356788888887653

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=98.34  E-value=0.0021  Score=58.21  Aligned_cols=212  Identities=14%  Similarity=0.113  Sum_probs=126.2

Q ss_pred             eEEEEECCCCceeEEeeccCccCeEEEE---eCCC----CcEEEEEec---------C-CcEEEEeCCCC----ceeEEE
Q psy17610        104 EIFLIDMNSGFTLTLVNTCHTSAIYDLQ---FPVN----FSSVFATCS---------K-NDIRIWSVRTL----NELLRI  162 (515)
Q Consensus       104 ~i~iw~~~~~~~~~~~~~~h~~~v~~~~---~~~~----~~~l~~~~~---------d-~~i~iw~~~~~----~~~~~~  162 (515)
                      .|++.|..+.+.+....-.....+.+++   +..+    ..++++++.         . |.|.++++...    ..+..+
T Consensus         3 ~i~l~d~~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i   82 (321)
T PF03178_consen    3 SIRLVDPTTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLI   82 (321)
T ss_dssp             EEEEEETTTSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEE
T ss_pred             EEEEEeCCCCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEE
Confidence            5788888775444332222333444443   4432    466776664         1 88999999884    223222


Q ss_pred             --EecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCc-eEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEcc
Q psy17610        163 --SVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGK-LKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLT  239 (515)
Q Consensus       163 --~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~  239 (515)
                        ....++|++++--  +.+|+++. .+.|.+|++...+ ....-.......+.++...  +++++.|.....+.++..+
T Consensus        83 ~~~~~~g~V~ai~~~--~~~lv~~~-g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~--~~~I~vgD~~~sv~~~~~~  157 (321)
T PF03178_consen   83 HSTEVKGPVTAICSF--NGRLVVAV-GNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVF--KNYILVGDAMKSVSLLRYD  157 (321)
T ss_dssp             EEEEESS-EEEEEEE--TTEEEEEE-TTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEE--TTEEEEEESSSSEEEEEEE
T ss_pred             EEEeecCcceEhhhh--CCEEEEee-cCEEEEEEccCcccchhhheecceEEEEEEecc--ccEEEEEEcccCEEEEEEE
Confidence              2456788887765  33455544 5789999998887 5444322333466666665  5599999988889988765


Q ss_pred             CCceeeEEee-ccccCceEEEEEecCCCEEEEEeCCCcEEEEEccc-----------ceEEEEEEcCccEEEE---EEcC
Q psy17610        240 RESQSLQCVL-KEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIK-----------STRLIIMILPSMIMSA---AYHP  304 (515)
Q Consensus       240 ~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~-----------~~~~~~~~~~~~~~~~---~~~~  304 (515)
                      .........- ......++++.+-++++.++.+..+|.+.++....           ......+..+..+.++   .+.|
T Consensus       158 ~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f~lg~~v~~~~~~~l~~  237 (321)
T PF03178_consen  158 EENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNPEIPNSRDGDPKLERISSFHLGDIVNSFRRGSLIP  237 (321)
T ss_dssp             TTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-SS-SSTTTTTTBEEEEEEEE-SS-EEEEEE--SS-
T ss_pred             ccCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECCCCcccccccccceeEEEEECCCccceEEEEEeee
Confidence            4333222222 22355688888886767999999999999998752           2344556666777777   4444


Q ss_pred             --CC------cEEEEEECCCeEEE
Q psy17610        305 --SE------VQLITCSTNKMIDY  320 (515)
Q Consensus       305 --~~------~~l~~~~~~~~i~~  320 (515)
                        .+      ..++.++.+|.|..
T Consensus       238 ~~~~~~~~~~~~i~~~T~~G~Ig~  261 (321)
T PF03178_consen  238 RSGSSESPNRPQILYGTVDGSIGV  261 (321)
T ss_dssp             -SSSS-TTEEEEEEEEETTS-EEE
T ss_pred             cCCCCcccccceEEEEecCCEEEE
Confidence              12      24777778887764

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>KOG1008|consensus

Probab=98.31  E-value=1.6e-07  Score=85.80  Aligned_cols=201  Identities=13%  Similarity=0.148  Sum_probs=131.0

Q ss_pred             CCCcEEEEEEecC--CCEEEEEecCceEEEEECCCCcee-EEeeccCccCeEEEEeCCCCcEEEEEec-----CCcEEEE
Q psy17610         80 DDSGISSLQYNPV--NNKVFVGTVNCEIFLIDMNSGFTL-TLVNTCHTSAIYDLQFPVNFSSVFATCS-----KNDIRIW  151 (515)
Q Consensus        80 ~~~~v~~~~~s~~--~~~l~~~~~d~~i~iw~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~l~~~~~-----d~~i~iw  151 (515)
                      ....+.|++..-+  ..++++|..+|.|-+-........ ..+..+|..+.++++|++-....++++-     |..+.||
T Consensus        55 dtqy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iw  134 (783)
T KOG1008|consen   55 DTQYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIW  134 (783)
T ss_pred             cCCCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccce
Confidence            3456778877653  457899999999999887653332 4456779999999999985444444443     5679999


Q ss_pred             eCCCC--ceeE--EEEe-cCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcC-CCCEEE
Q psy17610        152 SVRTL--NELL--RISV-MNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQ-DGTRLL  225 (515)
Q Consensus       152 ~~~~~--~~~~--~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~  225 (515)
                      |+.++  .+..  .+.. ......+++|..+.+.+.+|.....+.++|++.......  .-.+..+..+...| .+++++
T Consensus       135 di~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~--svnTk~vqG~tVdp~~~nY~c  212 (783)
T KOG1008|consen  135 DINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVS--SVNTKYVQGITVDPFSPNYFC  212 (783)
T ss_pred             ecccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhhhhhhh--hhhhhhcccceecCCCCCcee
Confidence            99876  2221  1222 223445788888888899999888999999874322111  11233456677788 777887


Q ss_pred             EecCCCcEEEEEccCCceeeEEeeccc----cCceEEEEEecCCC-EEEEEe-CCCcEEEEEcc
Q psy17610        226 SGGGEGQVRIWKLTRESQSLQCVLKEH----TSSVSVIQIKSDSK-EAMSAS-TDGTCVLWDLI  283 (515)
Q Consensus       226 ~~~~d~~i~iw~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~-~l~~~~-~d~~i~iwd~~  283 (515)
                      +-. ||.|.+||...+-..+...+...    ...+..++|.|... .+++.. ..++|+++|+.
T Consensus       213 s~~-dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~  275 (783)
T KOG1008|consen  213 SNS-DGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDIC  275 (783)
T ss_pred             ccc-cCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEeccc
Confidence            655 89999999422222222222222    23488899988543 333443 45789999874

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=98.25  E-value=0.00077  Score=59.37  Aligned_cols=226  Identities=12%  Similarity=0.078  Sum_probs=134.5

Q ss_pred             EEecCCCE-EEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEe----c
Q psy17610        260 QIKSDSKE-AMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLE----G  334 (515)
Q Consensus       260 ~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~----~  334 (515)
                      .|.++... +.+--..+.|.-|+..+++ ...+..+..+.+......+..|+++...  +.+++..++.....+.    .
T Consensus        31 ~w~~~~~~L~w~DI~~~~i~r~~~~~g~-~~~~~~p~~~~~~~~~d~~g~Lv~~~~g--~~~~~~~~~~~~t~~~~~~~~  107 (307)
T COG3386          31 VWDPDRGALLWVDILGGRIHRLDPETGK-KRVFPSPGGFSSGALIDAGGRLIACEHG--VRLLDPDTGGKITLLAEPEDG  107 (307)
T ss_pred             cCcCCCCEEEEEeCCCCeEEEecCCcCc-eEEEECCCCcccceeecCCCeEEEEccc--cEEEeccCCceeEEeccccCC
Confidence            45566554 4444456778888876543 3445555555555555555555554333  4455555554422222    1


Q ss_pred             CCCccEEEEEEcCCCCEEEEEcC---------CCeEEEEEcc-CCeeeeeccCCCCCeeEEEECCCCcEEEEEeCC-CcE
Q psy17610        335 SDVAAVNCVDFVDDGKYFLTGGA---------DQIVKMWMYR-EGVPCFVGIGHAASITKIKISPDKKVIVSVSAD-GGI  403 (515)
Q Consensus       335 ~~~~~i~~~~~~~~~~~l~~~~~---------dg~i~i~d~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-g~i  403 (515)
                      ......+.....|+|.+.+....         ...-.+|-+. .+........+-..-+.|+||||++.|..+... +.|
T Consensus       108 ~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i  187 (307)
T COG3386         108 LPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRI  187 (307)
T ss_pred             CCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCCCEEEeecCcEEecCceEECCCCCEEEEEeCCCCeE
Confidence            22245677889999987665443         0112445444 456666666666667889999999888877654 678


Q ss_pred             EEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCC-eEEEEecCCCeeeeeeccc
Q psy17610        404 FLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNK-MIDYWETCDGSIIRSLEGS  482 (515)
Q Consensus       404 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg-~v~iwd~~~~~~~~~~~~~  482 (515)
                      .-|++..........             .........++..-.++...+|.+.+++-.+| .|.+|+.. |+++..+.-+
T Consensus       188 ~r~~~d~~~g~~~~~-------------~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G~l~~~i~lP  253 (307)
T COG3386         188 HRYDLDPATGPIGGR-------------RGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-GKLLGEIKLP  253 (307)
T ss_pred             EEEecCcccCccCCc-------------ceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC-CcEEEEEECC
Confidence            878776411100000             00111112334566778888888776555554 89999987 9999998887


Q ss_pred             ccceEEEEEEc-CCCcEEEEee
Q psy17610        483 DVAAVNCVDFV-DDGKYFLTGG  503 (515)
Q Consensus       483 ~~~~v~~~~~s-~~~~~l~s~~  503 (515)
                      . ..+++++|- |+.+.|...+
T Consensus       254 ~-~~~t~~~FgG~~~~~L~iTs  274 (307)
T COG3386         254 V-KRPTNPAFGGPDLNTLYITS  274 (307)
T ss_pred             C-CCCccceEeCCCcCEEEEEe
Confidence            6 678888884 4555554433

>PRK13616 lipoprotein LpqB; Provisional

Probab=98.14  E-value=0.00024  Score=68.78  Aligned_cols=184  Identities=9%  Similarity=0.111  Sum_probs=107.2

Q ss_pred             CcEEEEEEecCCCEEEEEe------cC--ceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecC-C------
Q psy17610         82 SGISSLQYNPVNNKVFVGT------VN--CEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSK-N------  146 (515)
Q Consensus        82 ~~v~~~~~s~~~~~l~~~~------~d--~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d-~------  146 (515)
                      ..+...++||+|+.+|...      .|  ..|++++... .. .....+.  ..+.-.|+|||+.+.+.... .      
T Consensus       350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg-~~-~~lt~g~--~~t~PsWspDG~~lw~v~dg~~~~~v~~  425 (591)
T PRK13616        350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGG-VA-VQVLEGH--SLTRPSWSLDADAVWVVVDGNTVVRVIR  425 (591)
T ss_pred             cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCC-cc-eeeecCC--CCCCceECCCCCceEEEecCcceEEEec
Confidence            4678999999999988765      23  3566666533 22 3333333  38889999998888777542 2      


Q ss_pred             -----cEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEE---EecCCCceEE----EecCCCCCCeEE
Q psy17610        147 -----DIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRC---FTPQSGKLKF----IIPNAHNRGVTA  214 (515)
Q Consensus       147 -----~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~---~~~~~~~~~~----~~~~~~~~~v~~  214 (515)
                           .+.+.+++.++...   .....|..+.|||||.+++... ++.|.+   -....|+...    .+...-...+..
T Consensus       426 ~~~~gql~~~~vd~ge~~~---~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~~~  501 (591)
T PRK13616        426 DPATGQLARTPVDASAVAS---RVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQYALTNPREVGPGLGDTAVS  501 (591)
T ss_pred             cCCCceEEEEeccCchhhh---ccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCceeecccEEeecccCCcccc
Confidence                 23223443332222   2345699999999999988766 477777   4544554211    121223344688


Q ss_pred             EEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeecc--ccCceEEEEEecCCCEEEEEeCCCcE
Q psy17610        215 LAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKE--HTSSVSVIQIKSDSKEAMSASTDGTC  277 (515)
Q Consensus       215 ~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i  277 (515)
                      +.|.+++.++ ++..++.-.+|.+.-...... .+..  ...++..++-+++  .++....++.+
T Consensus       502 l~W~~~~~L~-V~~~~~~~~v~~v~vDG~~~~-~~~~~n~~~~v~~vaa~~~--~iyv~~~~g~~  562 (591)
T PRK13616        502 LDWRTGDSLV-VGRSDPEHPVWYVNLDGSNSD-ALPSRNLSAPVVAVAASPS--TVYVTDARAVL  562 (591)
T ss_pred             ceEecCCEEE-EEecCCCCceEEEecCCcccc-ccCCCCccCceEEEecCCc--eEEEEcCCceE
Confidence            9999988754 555555555565532222111 1122  2455666666552  35555555533

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=98.11  E-value=0.0032  Score=55.52  Aligned_cols=222  Identities=16%  Similarity=0.097  Sum_probs=130.8

Q ss_pred             EEEeeCCCEEE-EEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCce-eeEEee
Q psy17610        172 IVFTYDGKAIL-SGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQ-SLQCVL  249 (515)
Q Consensus       172 ~~~~~~~~~l~-~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~-~~~~~~  249 (515)
                      ..|.++...|+ +--..+.|.-|+..+++.....   +...+.++..-..+..|+++..  .+.+++.+.... ......
T Consensus        30 P~w~~~~~~L~w~DI~~~~i~r~~~~~g~~~~~~---~p~~~~~~~~~d~~g~Lv~~~~--g~~~~~~~~~~~~t~~~~~  104 (307)
T COG3386          30 PVWDPDRGALLWVDILGGRIHRLDPETGKKRVFP---SPGGFSSGALIDAGGRLIACEH--GVRLLDPDTGGKITLLAEP  104 (307)
T ss_pred             ccCcCCCCEEEEEeCCCCeEEEecCCcCceEEEE---CCCCcccceeecCCCeEEEEcc--ccEEEeccCCceeEEeccc
Confidence            35667766444 4456778999998877554322   2333455544444445554433  366666633332 222111


Q ss_pred             c-cc-cCceEEEEEecCCCEEEEEeC-----C----CcEEEEEcc-cceEEEEEEc-CccEEEEEEcCCCcEEEEEEC-C
Q psy17610        250 K-EH-TSSVSVIQIKSDSKEAMSAST-----D----GTCVLWDLI-KSTRLIIMIL-PSMIMSAAYHPSEVQLITCST-N  315 (515)
Q Consensus       250 ~-~~-~~~v~~~~~~~~~~~l~~~~~-----d----~~i~iwd~~-~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~-~  315 (515)
                      . +. ....+.....|+|.+.+....     .    ..-.+|.+. .+........ -...+.++|+||++.++.+.. .
T Consensus       105 ~~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~  184 (307)
T COG3386         105 EDGLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPA  184 (307)
T ss_pred             cCCCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCCCEEEeecCcEEecCceEECCCCCEEEEEeCCC
Confidence            1 11 234567778888876665433     0    111344444 3444444444 345688999999988887766 4


Q ss_pred             CeEEEEeCCC--C----ceEEEEecCCCccEEEEEEcCCCCEEEEEcCCC-eEEEEEccCCeeeeeccCCCCCeeEEEEC
Q psy17610        316 KMIDYWETCD--G----SIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQ-IVKMWMYREGVPCFVGIGHAASITKIKIS  388 (515)
Q Consensus       316 ~~i~~~d~~~--~----~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-~i~i~d~~~~~~~~~~~~~~~~i~~~~~~  388 (515)
                      +.|..|++..  +    +..........+..-.++...+|.+-+++..+| .|.+|+.+ ++++....-....+++++|-
T Consensus       185 ~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G~l~~~i~lP~~~~t~~~Fg  263 (307)
T COG3386         185 NRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-GKLLGEIKLPVKRPTNPAFG  263 (307)
T ss_pred             CeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC-CcEEEEEECCCCCCccceEe
Confidence            7888887652  1    111122222235566788888898876555554 89999997 88888877776778888885


Q ss_pred             -CCCcEEEEEeC
Q psy17610        389 -PDKKVIVSVSA  399 (515)
Q Consensus       389 -~~~~~l~~~~~  399 (515)
                       |+.+.|+..+.
T Consensus       264 G~~~~~L~iTs~  275 (307)
T COG3386         264 GPDLNTLYITSA  275 (307)
T ss_pred             CCCcCEEEEEec
Confidence             34555555444

>KOG4499|consensus

Probab=98.07  E-value=0.003  Score=51.22  Aligned_cols=218  Identities=11%  Similarity=0.074  Sum_probs=115.0

Q ss_pred             CEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCC--cEEE-EEECCCeEEEEeCC--CCceEEEEec----CC
Q psy17610        266 KEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSE--VQLI-TCSTNKMIDYWETC--DGSIIRSLEG----SD  336 (515)
Q Consensus       266 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~-~~~~~~~i~~~d~~--~~~~~~~~~~----~~  336 (515)
                      .++..--..+.|.-||..+.+..+......+..++.+--.+  +.++ .++..-.|.-||-.  .....+++..    ..
T Consensus        28 sLl~VDi~ag~v~r~D~~qn~v~ra~ie~p~~ag~ilpv~~~~q~~~v~~G~kf~i~nwd~~~~~a~v~~t~~ev~~d~k  107 (310)
T KOG4499|consen   28 SLLYVDIEAGEVHRYDIEQNKVYRAKIEGPPSAGFILPVEGGPQEFAVGCGSKFVIVNWDGVSESAKVYRTLFEVQPDRK  107 (310)
T ss_pred             eEEEEEeccCceehhhhhhhheEEEEEecCcceeEEEEecCCCceEEEeecceEEEEEcccccceeeeeeeccccCchHH
Confidence            34444445677777998776544433322223333332222  2233 33333345557733  2233333211    11


Q ss_pred             CccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCC--------CCeeEEEECCCCcEEEEE-eCCCcEEEEe
Q psy17610        337 VAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHA--------ASITKIKISPDKKVIVSV-SADGGIFLWT  407 (515)
Q Consensus       337 ~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--------~~i~~~~~~~~~~~l~~~-~~dg~i~iw~  407 (515)
                      ....+.-..+|+|++++ |...-.-..+....+.+..-+.+|.        .--+.++|+.+.+.+... +.+-.|.-||
T Consensus       108 knR~NDgkvdP~Gryy~-GtMad~~~~le~~~g~Ly~~~~~h~v~~i~~~v~IsNgl~Wd~d~K~fY~iDsln~~V~a~d  186 (310)
T KOG4499|consen  108 KNRLNDGKVDPDGRYYG-GTMADFGDDLEPIGGELYSWLAGHQVELIWNCVGISNGLAWDSDAKKFYYIDSLNYEVDAYD  186 (310)
T ss_pred             hcccccCccCCCCceee-eeeccccccccccccEEEEeccCCCceeeehhccCCccccccccCcEEEEEccCceEEeeee
Confidence            24556677899999844 3221111122222233333333332        233578898887766655 4566787788


Q ss_pred             CCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceE
Q psy17610        408 FPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAV  487 (515)
Q Consensus       408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v  487 (515)
                      ..-........+.+.......         ....-..-.++...+|.+.++.-..++|...|..+|+.+.++.-+. ..|
T Consensus       187 yd~~tG~~snr~~i~dlrk~~---------~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eiklPt-~qi  256 (310)
T KOG4499|consen  187 YDCPTGDLSNRKVIFDLRKSQ---------PFESLEPDGMTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIKLPT-PQI  256 (310)
T ss_pred             cCCCcccccCcceeEEeccCC---------CcCCCCCCcceEccCCcEEEEEecCcEEEEECCCCCcEEEEEEcCC-Cce
Confidence            543322222222111110000         0000112334556688888888889999999999999999998876 899


Q ss_pred             EEEEEcC
Q psy17610        488 NCVDFVD  494 (515)
Q Consensus       488 ~~~~~s~  494 (515)
                      ++++|--
T Consensus       257 tsccFgG  263 (310)
T KOG4499|consen  257 TSCCFGG  263 (310)
T ss_pred             EEEEecC
Confidence            9999953

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=98.03  E-value=0.0011  Score=47.19  Aligned_cols=101  Identities=17%  Similarity=0.321  Sum_probs=70.8

Q ss_pred             EEEEEEec-CC---CEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCcee
Q psy17610         84 ISSLQYNP-VN---NKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNEL  159 (515)
Q Consensus        84 v~~~~~s~-~~---~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~  159 (515)
                      |++|++.. ++   +.|++|+.|..|++|+-+.  .+..+.  -.+.|+++.-... ..++.+-.+|+|-+|+-  ...+
T Consensus         2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~e--~~~Ei~--e~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~--~~Rl   74 (111)
T PF14783_consen    2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGDE--IVAEIT--ETDKVTSLCSLGG-GRFAYALANGTVGVYDR--SQRL   74 (111)
T ss_pred             eeEEEEEecCCCCcceEEEecCCcEEEEEeCCc--EEEEEe--cccceEEEEEcCC-CEEEEEecCCEEEEEeC--ccee
Confidence            67777766 33   5899999999999999765  333332  4567888887776 57888888999999974  3456


Q ss_pred             EEEEecCeEEEEEEE-eeCC---CEEEEEeCCCeEEE
Q psy17610        160 LRISVMNMICACIVF-TYDG---KAILSGWNDGFIRC  192 (515)
Q Consensus       160 ~~~~~~~~~v~~~~~-~~~~---~~l~~~~~dg~i~~  192 (515)
                      .+.+.... +.++.+ ..++   ..|++|..+|.|-+
T Consensus        75 WRiKSK~~-~~~~~~~D~~gdG~~eLI~GwsnGkve~  110 (111)
T PF14783_consen   75 WRIKSKNQ-VTSMAFYDINGDGVPELIVGWSNGKVEV  110 (111)
T ss_pred             eeeccCCC-eEEEEEEcCCCCCceEEEEEecCCeEEe
Confidence            66664444 444444 3333   37889999988753

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=98.03  E-value=0.0027  Score=62.71  Aligned_cols=143  Identities=13%  Similarity=0.105  Sum_probs=100.9

Q ss_pred             CCEEEEE-eCCCcEEEEEcccceEEEEEEcCccEEEEEEcCC-------CcEEEEEECCCeEEEEeCCCCc--eEEE-E-
Q psy17610        265 SKEAMSA-STDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPS-------EVQLITCSTNKMIDYWETCDGS--IIRS-L-  332 (515)
Q Consensus       265 ~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-------~~~l~~~~~~~~i~~~d~~~~~--~~~~-~-  332 (515)
                      .++++.. .....|+-.|++.++.+.....+..+.-..+.|+       ....+.|-.+..+..||.+-..  .+.. . 
T Consensus       493 ~~mil~~~~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k  572 (794)
T PF08553_consen  493 RNMILLDPNNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSK  572 (794)
T ss_pred             cceEeecCCCCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeecccc
Confidence            3444433 3457899999999999999887765544455553       3356778888899999988643  2211 1 


Q ss_pred             ecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCC
Q psy17610        333 EGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFP  409 (515)
Q Consensus       333 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~  409 (515)
                      .-.......|++-+.+| +||+|+.+|.|++||--..+....+++-..+|..|..+.||+++++.+. ..+.+++..
T Consensus       573 ~Y~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc~-tyLlLi~t~  647 (794)
T PF08553_consen  573 QYSSKNNFSCFATTEDG-YIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATCK-TYLLLIDTL  647 (794)
T ss_pred             ccccCCCceEEEecCCc-eEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEeec-ceEEEEEEe
Confidence            11223567888888877 5999999999999995333333445677899999999999999886654 467777764

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=98.01  E-value=0.00026  Score=64.57  Aligned_cols=80  Identities=13%  Similarity=0.128  Sum_probs=57.3

Q ss_pred             ceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCC-----------------
Q psy17610        434 RLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDG-----------------  496 (515)
Q Consensus       434 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~-----------------  496 (515)
                      +..+......+.+++.+|++++.|+.+.-|.|.++|+.++..++.+++.....+.-+.....+                 
T Consensus       300 r~~l~D~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~  379 (415)
T PF14655_consen  300 RFGLPDSKREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFA  379 (415)
T ss_pred             EEeeccCCceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcce
Confidence            334455566799999999999999988889999999999999988887653333333222111                 


Q ss_pred             cE-EEEeecCCeEEEEEE
Q psy17610        497 KY-FLTGGADQIVKICLY  513 (515)
Q Consensus       497 ~~-l~s~~~dg~v~iw~~  513 (515)
                      .+ ++-+-.-|.|-||.+
T Consensus       380 l~LvIyaprRg~lEvW~~  397 (415)
T PF14655_consen  380 LFLVIYAPRRGILEVWSM  397 (415)
T ss_pred             EEEEEEeccCCeEEEEec
Confidence            12 334667888999975

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=98.00  E-value=0.0056  Score=56.11  Aligned_cols=89  Identities=15%  Similarity=0.161  Sum_probs=57.9

Q ss_pred             EEEeCCCCcEEEEEecCCcEEE---EeCCC-C----ceeEEEE----ec-CeEEEEEEEee-----------CCCEEEEE
Q psy17610        129 DLQFPVNFSSVFATCSKNDIRI---WSVRT-L----NELLRIS----VM-NMICACIVFTY-----------DGKAILSG  184 (515)
Q Consensus       129 ~~~~~~~~~~l~~~~~d~~i~i---w~~~~-~----~~~~~~~----~~-~~~v~~~~~~~-----------~~~~l~~~  184 (515)
                      .++.+|++..|+.+..++.+.+   |+... +    .......    .. ...|+++.+-|           |...+++|
T Consensus         6 ~isls~~~d~laiA~~~r~vil~~~w~~~~~~~~~~~~~~~~~g~l~~~~~e~ITsi~clpl~s~~~s~~~~dw~~I~VG   85 (415)
T PF14655_consen    6 SISLSPDGDLLAIARGQRLVILTSKWDSSRKGENENTYSISWSGPLDDEPGECITSILCLPLSSQKRSTGGPDWTCIAVG   85 (415)
T ss_pred             eEEecCCCCEEEEEcCCEEEEEEeeccccccCCCCCeEEEEeeeeccCCCCCEEEEEEEEEeecccccCCCCCcEEEEEE
Confidence            4677899988888877766555   64321 1    1111111    11 14677777654           35688999


Q ss_pred             eCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcC
Q psy17610        185 WNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQ  219 (515)
Q Consensus       185 ~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  219 (515)
                      ..+|.|++|.. +|..+..- .-|..+|..+....
T Consensus        86 ~ssG~vrfyte-~G~LL~~Q-~~h~~pV~~ik~~~  118 (415)
T PF14655_consen   86 TSSGYVRFYTE-NGVLLLSQ-LLHEEPVLKIKCRS  118 (415)
T ss_pred             ecccEEEEEec-cchHHHHH-hcCccceEEEEecc
Confidence            99999999985 55554433 46889999888754

>KOG4640|consensus

Probab=97.97  E-value=3.7e-05  Score=70.80  Aligned_cols=94  Identities=15%  Similarity=0.220  Sum_probs=82.2

Q ss_pred             cCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEE-EEEEeeCCCEEEEEeCCCeEEEEecCCCceEEE
Q psy17610        125 SAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICA-CIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFI  203 (515)
Q Consensus       125 ~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~  203 (515)
                      ..|.-+.|+|.-..++.+..+|.+.+..+. .+.+.++..++..++ +++|.|||+.|++|-.||+|++.|++++..+..
T Consensus        21 ~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~~   99 (665)
T KOG4640|consen   21 INIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLVS   99 (665)
T ss_pred             cceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCceec
Confidence            357889999998899999999999999987 788888887777777 999999999999999999999999999988877


Q ss_pred             ecCCCCCCeEEEEEcC
Q psy17610        204 IPNAHNRGVTALAITQ  219 (515)
Q Consensus       204 ~~~~~~~~v~~~~~~~  219 (515)
                      .+.....+|.++-|.+
T Consensus       100 ~~~s~e~~is~~~w~~  115 (665)
T KOG4640|consen  100 FLFSVETDISKGIWDR  115 (665)
T ss_pred             cccccccchheeeccc
Confidence            5556778889999974

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.91  E-value=0.0061  Score=51.56  Aligned_cols=162  Identities=16%  Similarity=0.174  Sum_probs=106.9

Q ss_pred             ccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecC-eEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCc
Q psy17610        121 TCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMN-MICACIVFTYDGKAILSGWNDGFIRCFTPQSGK  199 (515)
Q Consensus       121 ~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~  199 (515)
                      .+-...+.++.|+|+.+.|++......-.||=..+|+.+.++.-.. .....+.+..++++.++--+++.+.++.+....
T Consensus        82 ~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~t  161 (316)
T COG3204          82 LGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDADT  161 (316)
T ss_pred             ccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcCCc
Confidence            3455569999999999999999998888888777888888765221 123467788888888887788888888776553


Q ss_pred             eEEE-----ec---CCC-CCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceee-EEeeccc-------cCceEEEEEe
Q psy17610        200 LKFI-----IP---NAH-NRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSL-QCVLKEH-------TSSVSVIQIK  262 (515)
Q Consensus       200 ~~~~-----~~---~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~-~~~~~~~-------~~~v~~~~~~  262 (515)
                      ....     ++   ..+ ......++|.|..+.|..+-+-.-+.||.+....... ......+       -..|.++.|+
T Consensus       162 ~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvSgl~~~  241 (316)
T COG3204         162 TVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDVSGLEFN  241 (316)
T ss_pred             cEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcccccccccCcccccceEeeccccceec
Confidence            2211     11   122 5678899999998889888888888888875332111 1111111       2345667777


Q ss_pred             cCCC-EEEEEeCCCcEEEEEc
Q psy17610        263 SDSK-EAMSASTDGTCVLWDL  282 (515)
Q Consensus       263 ~~~~-~l~~~~~d~~i~iwd~  282 (515)
                      +..+ +++.+.+++.+.-.|.
T Consensus       242 ~~~~~LLVLS~ESr~l~Evd~  262 (316)
T COG3204         242 AITNSLLVLSDESRRLLEVDL  262 (316)
T ss_pred             CCCCcEEEEecCCceEEEEec
Confidence            6444 4444555555555554

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.91  E-value=0.0099  Score=49.91  Aligned_cols=115  Identities=14%  Similarity=0.149  Sum_probs=82.7

Q ss_pred             cceEEEEEEcCccEEEEEEcCCCc-EEEEEECCCe-EEEEeCCCCceEEEEecCCCc-cEEEEEEcCCCCEEEEEcCC--
Q psy17610        284 KSTRLIIMILPSMIMSAAYHPSEV-QLITCSTNKM-IDYWETCDGSIIRSLEGSDVA-AVNCVDFVDDGKYFLTGGAD--  358 (515)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~-i~~~d~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~~d--  358 (515)
                      .++.+.....+.....++++|... .++.+-.-|+ ..++|....+.+..+...... -.-.-.|||||.+|++.-.|  
T Consensus        57 aGk~v~~~~lpaR~Hgi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd  136 (366)
T COG3490          57 AGKIVFATALPARGHGIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFD  136 (366)
T ss_pred             CCceeeeeecccccCCeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCC
Confidence            355666667777778888988654 4455555554 678898888777666543211 12234799999999876443  


Q ss_pred             ---CeEEEEEccCC-eeeeeccCCCCCeeEEEECCCCcEEEEEe
Q psy17610        359 ---QIVKMWMYREG-VPCFVGIGHAASITKIKISPDKKVIVSVS  398 (515)
Q Consensus       359 ---g~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~  398 (515)
                         |.|-|||.+.+ +.+.++..|.-....+.+.+||+.++.+.
T Consensus       137 ~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvan  180 (366)
T COG3490         137 PNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVAN  180 (366)
T ss_pred             CCCceEEEEecccccceecccccCCcCcceeEEecCCcEEEEeC
Confidence               78999999865 55677888888888999999999998764

>PRK13616 lipoprotein LpqB; Provisional

Probab=97.86  E-value=0.0032  Score=61.24  Aligned_cols=186  Identities=11%  Similarity=0.091  Sum_probs=101.8

Q ss_pred             cCeEEEEeCCCCcEEEEEec------CCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCC-----------
Q psy17610        125 SAIYDLQFPVNFSSVFATCS------KNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWND-----------  187 (515)
Q Consensus       125 ~~v~~~~~~~~~~~l~~~~~------d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----------  187 (515)
                      ..+.+.+++|+|+.++....      |..-.||-...+.....+.... ..+.-.|+|+|+.+++....           
T Consensus       350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~~~~lt~g~-~~t~PsWspDG~~lw~v~dg~~~~~v~~~~~  428 (591)
T PRK13616        350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGVAVQVLEGH-SLTRPSWSLDADAVWVVVDGNTVVRVIRDPA  428 (591)
T ss_pred             cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCcceeeecCC-CCCCceECCCCCceEEEecCcceEEEeccCC
Confidence            46789999999999888772      4444445433233334443222 37788999998878776533           


Q ss_pred             -CeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccC-Ccee-eE----EeeccccCceEEEE
Q psy17610        188 -GFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTR-ESQS-LQ----CVLKEHTSSVSVIQ  260 (515)
Q Consensus       188 -g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~-~~~~-~~----~~~~~~~~~v~~~~  260 (515)
                       +.+.+.+++.++...    .....|..+.|+|||..++... ++.|.+=-+.. ..+. .+    ....+-...+..+.
T Consensus       429 ~gql~~~~vd~ge~~~----~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~~~l~  503 (591)
T PRK13616        429 TGQLARTPVDASAVAS----RVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQYALTNPREVGPGLGDTAVSLD  503 (591)
T ss_pred             CceEEEEeccCchhhh----ccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCceeecccEEeecccCCccccce
Confidence             223333333333221    2245799999999999988765 46777633221 1121 11    11122333467899


Q ss_pred             EecCCCEEEEEeCCCcEEEEEccc-ceEEEEEEc---CccEEEEEEcCCCcEEEEEECCCeEE
Q psy17610        261 IKSDSKEAMSASTDGTCVLWDLIK-STRLIIMIL---PSMIMSAAYHPSEVQLITCSTNKMID  319 (515)
Q Consensus       261 ~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~i~  319 (515)
                      |.+++.++ .+..++.-.+|.+.- +.....+..   ..++..++-.++  .++....++.+.
T Consensus       504 W~~~~~L~-V~~~~~~~~v~~v~vDG~~~~~~~~~n~~~~v~~vaa~~~--~iyv~~~~g~~~  563 (591)
T PRK13616        504 WRTGDSLV-VGRSDPEHPVWYVNLDGSNSDALPSRNLSAPVVAVAASPS--TVYVTDARAVLQ  563 (591)
T ss_pred             EecCCEEE-EEecCCCCceEEEecCCccccccCCCCccCceEEEecCCc--eEEEEcCCceEE
Confidence            99988854 555554444554432 111111122   234555555542  344555555443

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=97.85  E-value=0.004  Score=44.50  Aligned_cols=101  Identities=13%  Similarity=0.195  Sum_probs=72.6

Q ss_pred             eEEEEEec---C-CCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEE
Q psy17610        256 VSVIQIKS---D-SKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRS  331 (515)
Q Consensus       256 v~~~~~~~---~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~  331 (515)
                      |+++++..   + .+.|++|+.|..|++|+  ..+.+..+.....+.+++.... ..++.+..+|+|-+|+-  ...+..
T Consensus         2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~--~~e~~~Ei~e~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~--~~RlWR   76 (111)
T PF14783_consen    2 VTALCLFDFDGDGENELLVGSDDFEIRVFK--GDEIVAEITETDKVTSLCSLGG-GRFAYALANGTVGVYDR--SQRLWR   76 (111)
T ss_pred             eeEEEEEecCCCCcceEEEecCCcEEEEEe--CCcEEEEEecccceEEEEEcCC-CEEEEEecCCEEEEEeC--cceeee
Confidence            45566543   2 25799999999999997  4577888888888888888776 66889999999999974  444445


Q ss_pred             EecCCCccEEEEEEcC-C--C-CEEEEEcCCCeEEE
Q psy17610        332 LEGSDVAAVNCVDFVD-D--G-KYFLTGGADQIVKM  363 (515)
Q Consensus       332 ~~~~~~~~i~~~~~~~-~--~-~~l~~~~~dg~i~i  363 (515)
                      .+..  ..+.++.+.. +  | .-|++|-.+|.|-+
T Consensus        77 iKSK--~~~~~~~~~D~~gdG~~eLI~GwsnGkve~  110 (111)
T PF14783_consen   77 IKSK--NQVTSMAFYDINGDGVPELIVGWSNGKVEV  110 (111)
T ss_pred             eccC--CCeEEEEEEcCCCCCceEEEEEecCCeEEe
Confidence            5544  3455665543 3  2 36888888888753

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.82  E-value=0.014  Score=49.00  Aligned_cols=230  Identities=16%  Similarity=0.188  Sum_probs=135.8

Q ss_pred             EEEEeCCCCcEEEEEe-cCCc-EEEEeCCCCceeEEEEecCeE--EEEEEEeeCCCEEEEEeCC-----CeEEEEecCCC
Q psy17610        128 YDLQFPVNFSSVFATC-SKND-IRIWSVRTLNELLRISVMNMI--CACIVFTYDGKAILSGWND-----GFIRCFTPQSG  198 (515)
Q Consensus       128 ~~~~~~~~~~~l~~~~-~d~~-i~iw~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~~d-----g~i~~~~~~~~  198 (515)
                      ..++|+|..+.-++-. .-|+ ..++|....+.+..+...++.  --.-.|+|||.+|...-.|     |.|-+||.+.+
T Consensus        71 Hgi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r~~  150 (366)
T COG3490          71 HGIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDAREG  150 (366)
T ss_pred             CCeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEecccc
Confidence            4577888655444433 3455 678898888776665433221  1224699999988876543     78999998854


Q ss_pred             c-eEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEE--------------------EccCCceeeEEeec--cccCc
Q psy17610        199 K-LKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIW--------------------KLTRESQSLQCVLK--EHTSS  255 (515)
Q Consensus       199 ~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw--------------------~~~~~~~~~~~~~~--~~~~~  255 (515)
                      - .+.++ ..|.-....+.+.+||+.++.+.  |-|..-                    |..++......+++  -+.-.
T Consensus       151 fqrvgE~-~t~GiGpHev~lm~DGrtlvvan--GGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~l~~lS  227 (366)
T COG3490         151 FQRVGEF-STHGIGPHEVTLMADGRTLVVAN--GGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPASLRQLS  227 (366)
T ss_pred             cceeccc-ccCCcCcceeEEecCCcEEEEeC--CceecccccCccccchhhcCccEEEEeccccchhhhccCchhhhhcc
Confidence            3 34445 56777788999999999988764  334433                    21111111112222  34456


Q ss_pred             eEEEEEecCCCEEEEEeCCCc-----EEEEEcccceEEEEEEcCc--------cEEEEEEcCCCcEEEEEEC-CCeEEEE
Q psy17610        256 VSVIQIKSDSKEAMSASTDGT-----CVLWDLIKSTRLIIMILPS--------MIMSAAYHPSEVQLITCST-NKMIDYW  321 (515)
Q Consensus       256 v~~~~~~~~~~~l~~~~~d~~-----i~iwd~~~~~~~~~~~~~~--------~~~~~~~~~~~~~l~~~~~-~~~i~~~  321 (515)
                      |..++..+||...+-+-..|.     -.+=-...++.+..+..+.        .+-+++.+.+..+++..+- .+...+|
T Consensus       228 iRHld~g~dgtvwfgcQy~G~~~d~ppLvg~~~~g~~l~~~~~pee~~~~~anYigsiA~n~~~glV~lTSP~GN~~vi~  307 (366)
T COG3490         228 IRHLDIGRDGTVWFGCQYRGPRNDLPPLVGHFRKGEPLEFLDLPEEQTAAFANYIGSIAANRRDGLVALTSPRGNRAVIW  307 (366)
T ss_pred             eeeeeeCCCCcEEEEEEeeCCCccCCcceeeccCCCcCcccCCCHHHHHHHHhhhhheeecccCCeEEEecCCCCeEEEE
Confidence            777777777765554433321     1111123344444444432        3677888876666665555 4567899


Q ss_pred             eCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEE
Q psy17610        322 ETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWM  365 (515)
Q Consensus       322 d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d  365 (515)
                      |..++..+.......   ...++.  ...-+++.+.+|.+.++.
T Consensus       308 da~tG~vv~~a~l~d---aaGva~--~~~gf~vssg~G~~~~~s  346 (366)
T COG3490         308 DAATGAVVSEAALPD---AAGVAA--AKGGFAVSSGQGRIIFYS  346 (366)
T ss_pred             EcCCCcEEecccccc---ccccee--ccCceEEecCCceEEecc
Confidence            999999877655433   112222  233456666678887774

>KOG2395|consensus

Probab=97.80  E-value=0.0021  Score=58.48  Aligned_cols=197  Identities=15%  Similarity=0.191  Sum_probs=121.4

Q ss_pred             CCcEEEEEEec-CCCEEEEEec------CceEEEEECCCCceeEEeec------cCccCe-EEEEeCCCCcEEEEEec-C
Q psy17610         81 DSGISSLQYNP-VNNKVFVGTV------NCEIFLIDMNSGFTLTLVNT------CHTSAI-YDLQFPVNFSSVFATCS-K  145 (515)
Q Consensus        81 ~~~v~~~~~s~-~~~~l~~~~~------d~~i~iw~~~~~~~~~~~~~------~h~~~v-~~~~~~~~~~~l~~~~~-d  145 (515)
                      .+.|.++++.. ++.+|+++..      +..|=|+..+.|.+...-..      ++.-.. ..+-...+.+.|+.... .
T Consensus       276 ~~~i~sl~~~a~~NS~Lvv~~~ns~V~Rn~~iGVfk~ekgl~f~~~i~n~s~~~g~S~~P~K~mL~~~dsnlil~~~~~~  355 (644)
T KOG2395|consen  276 EGGIGSLDEGALDNSFLVVGYGNSYVTRNNRIGVFKNEKGLEFKAAIKNVSDGDGKSIDPHKAMLHRADSNLILMDGGEQ  355 (644)
T ss_pred             hcccchhhhcccCCceEEecccceEEEecceeeeeccCCceEEEeccCcccCCCccccCcchhhhhccccceEeeCCCCc
Confidence            36788888876 5556666654      23333443333222222111      111111 11222233334444333 5


Q ss_pred             CcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCC-------EEEEEeCCCeEEEEecCCCce-EEEecCCC----CCCeE
Q psy17610        146 NDIRIWSVRTLNELLRISVMNMICACIVFTYDGK-------AILSGWNDGFIRCFTPQSGKL-KFIIPNAH----NRGVT  213 (515)
Q Consensus       146 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~-------~l~~~~~dg~i~~~~~~~~~~-~~~~~~~~----~~~v~  213 (515)
                      ..++-.|++.|+.+.....+.. |.-+.+.|+.+       .-+.|-.+..|.-||++-... .......|    .....
T Consensus       356 ~~l~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~kqy~~k~nFs  434 (644)
T KOG2395|consen  356 DKLYKLDIERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSKQYSTKNNFS  434 (644)
T ss_pred             CcceeeecccceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeeccccccccccc
Confidence            6688889999999999887776 67777887653       224566678899999874322 11111223    34466


Q ss_pred             EEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEc
Q psy17610        214 ALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDL  282 (515)
Q Consensus       214 ~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~  282 (515)
                      |.+-..+| ++++|+.+|.|++||-  -.......+++...+|..+..+.+|++++..+. ..+.+.++
T Consensus       435 c~aTT~sG-~IvvgS~~GdIRLYdr--i~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc~-tyLlLi~t  499 (644)
T KOG2395|consen  435 CFATTESG-YIVVGSLKGDIRLYDR--IGRRAKTALPGLGDAIKHVDVTADGKWILATCK-TYLLLIDT  499 (644)
T ss_pred             eeeecCCc-eEEEeecCCcEEeehh--hhhhhhhcccccCCceeeEEeeccCcEEEEecc-cEEEEEEE
Confidence            77766666 7899999999999996  233445567888999999999999999887665 46666664

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=97.76  E-value=0.03  Score=50.73  Aligned_cols=261  Identities=13%  Similarity=0.102  Sum_probs=113.7

Q ss_pred             ceEEEecCCCC-CCeEEEEEc-----------CCCCEEEEec-CCCcEEEEEccCCc--eeeEEeecc---cc----Cce
Q psy17610        199 KLKFIIPNAHN-RGVTALAIT-----------QDGTRLLSGG-GEGQVRIWKLTRES--QSLQCVLKE---HT----SSV  256 (515)
Q Consensus       199 ~~~~~~~~~~~-~~v~~~~~~-----------~~~~~l~~~~-~d~~i~iw~~~~~~--~~~~~~~~~---~~----~~v  256 (515)
                      +.+..+..++. ......-|+           .+.++|+..+ ..+.|.++|+.+..  .+....+..   +.    ...
T Consensus        53 qVIhrl~mp~~GDElHH~GWNaCSsc~~~~~~~~Rr~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~P  132 (461)
T PF05694_consen   53 QVIHRLPMPNRGDELHHSGWNACSSCHYGDPSKERRYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRP  132 (461)
T ss_dssp             SEEEEEE-SSS---B---EES--GGSTT--TT--S-EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEE
T ss_pred             cEEEEEeCCCCCCccccccCcccccccCCCCcccCCcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCC
Confidence            44554444443 345555554           2345666655 67899999986332  233333332   11    122


Q ss_pred             EEEEEecCCCEEEEEeC------CCcEEEEEcccceEEEEEEcCc----cEEEEEEcCCCcEEEEEE-------------
Q psy17610        257 SVIQIKSDSKEAMSAST------DGTCVLWDLIKSTRLIIMILPS----MIMSAAYHPSEVQLITCS-------------  313 (515)
Q Consensus       257 ~~~~~~~~~~~l~~~~~------d~~i~iwd~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~-------------  313 (515)
                      ..+..-|+|+.++++-.      -|-+.+.|-++.+.......+.    .-+.+-+.|..+.+++..             
T Consensus       133 HT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~  212 (461)
T PF05694_consen  133 HTVHCLPDGRIMISALGDADGNGPGGFVLLDGETFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNP  212 (461)
T ss_dssp             EEEEE-SS--EEEEEEEETTS-S--EEEEE-TTT--EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---T
T ss_pred             ceeeecCCccEEEEeccCCCCCCCCcEEEEcCccccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCCh
Confidence            33344578888887533      2568888888777776665432    356677888888888754             


Q ss_pred             -------CCCeEEEEeCCCCceEEEEecCCCc-cEEEEEEcC--CCCEEEEEc-CCCeEEEEEc-cCCe----eeeeccC
Q psy17610        314 -------TNKMIDYWETCDGSIIRSLEGSDVA-AVNCVDFVD--DGKYFLTGG-ADQIVKMWMY-REGV----PCFVGIG  377 (515)
Q Consensus       314 -------~~~~i~~~d~~~~~~~~~~~~~~~~-~i~~~~~~~--~~~~l~~~~-~dg~i~i~d~-~~~~----~~~~~~~  377 (515)
                             ...++.+||+.+.+.++++.....+ ....+.|..  +..+=++|+ -...|..|-- +.++    .+..+..
T Consensus       213 ~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~  292 (461)
T PF05694_consen  213 EDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPA  292 (461)
T ss_dssp             TTHHHH-S--EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--
T ss_pred             hHhhcccccCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCC
Confidence                   2467999999999999999876533 345666654  344433332 2334444432 3331    2222211


Q ss_pred             -----------------CCCCeeEEEECCCCcEEEEEeC-CCcEEEEeCCCCcCccCCCcccceeeecccccccceeeec
Q psy17610        378 -----------------HAASITKIKISPDKKVIVSVSA-DGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMI  439 (515)
Q Consensus       378 -----------------~~~~i~~~~~~~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  439 (515)
                                       -..-|+.|..|.|.++|..+.. +|.++.||+..................... ......-..
T Consensus       293 ~~v~~~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~-~~~~v~g~~  371 (461)
T PF05694_consen  293 KKVEGWILPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKG-DHPVVKGKR  371 (461)
T ss_dssp             EE--SS---GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B---TTS----
T ss_pred             cccCcccccccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCCCCCCcEEeEEEECcEeccC-CCccccccc
Confidence                             1345799999999999987765 899999999876432211110000000000 000000011


Q ss_pred             CcccEEEeeeccCCcEEEEee
Q psy17610        440 LPSMIMSAAYHPSEVQLITCS  460 (515)
Q Consensus       440 ~~~~i~~~~~s~~~~~l~~~~  460 (515)
                      ..+...-+..|-||++|...+
T Consensus       372 l~GgPqMvqlS~DGkRlYvTn  392 (461)
T PF05694_consen  372 LRGGPQMVQLSLDGKRLYVTN  392 (461)
T ss_dssp             --S----EEE-TTSSEEEEE-
T ss_pred             cCCCCCeEEEccCCeEEEEEe
Confidence            223356778889999887654

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.73  E-value=0.017  Score=49.00  Aligned_cols=169  Identities=8%  Similarity=0.107  Sum_probs=116.8

Q ss_pred             EecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCc
Q psy17610        163 SVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRES  242 (515)
Q Consensus       163 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~  242 (515)
                      .+....+.++.|+|+.+.|++......-.++=...|+.+.+++..--.....+.+..++++.++--.++.+.++.++..+
T Consensus        82 ~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~t  161 (316)
T COG3204          82 LGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDADT  161 (316)
T ss_pred             ccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcCCc
Confidence            34445589999999999999998888888887788999988875555666788999888888888888999998876442


Q ss_pred             eeeE-----Ee---eccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEE---EcC--------ccEEEEEEc
Q psy17610        243 QSLQ-----CV---LKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIM---ILP--------SMIMSAAYH  303 (515)
Q Consensus       243 ~~~~-----~~---~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~---~~~--------~~~~~~~~~  303 (515)
                      ....     ..   ..........++|+|....|+.+-+..-+.++...........   ..+        ..+.++.|+
T Consensus       162 ~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvSgl~~~  241 (316)
T COG3204         162 TVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDVSGLEFN  241 (316)
T ss_pred             cEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcccccccccCcccccceEeeccccceec
Confidence            2111     11   1122556789999999999999988888888876543311111   111        236777888


Q ss_pred             CC-CcEEEEEECCCeEEEEeCCCCceEEEE
Q psy17610        304 PS-EVQLITCSTNKMIDYWETCDGSIIRSL  332 (515)
Q Consensus       304 ~~-~~~l~~~~~~~~i~~~d~~~~~~~~~~  332 (515)
                      +. +..++.+.+++.+.-.|.. |.++..+
T Consensus       242 ~~~~~LLVLS~ESr~l~Evd~~-G~~~~~l  270 (316)
T COG3204         242 AITNSLLVLSDESRRLLEVDLS-GEVIELL  270 (316)
T ss_pred             CCCCcEEEEecCCceEEEEecC-CCeeeeE
Confidence            75 4555666667777777753 4434433

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=97.73  E-value=0.0013  Score=64.89  Aligned_cols=147  Identities=13%  Similarity=0.052  Sum_probs=94.3

Q ss_pred             CCCEEEEE-cCCCeEEEEEccCCeeeeeccCCCCC-eeEEEECC-----CCcEEEEEeCCCcEEEEeCCCCcCccCCCcc
Q psy17610        348 DGKYFLTG-GADQIVKMWMYREGVPCFVGIGHAAS-ITKIKISP-----DKKVIVSVSADGGIFLWTFPELEDDVGDSRS  420 (515)
Q Consensus       348 ~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~-i~~~~~~~-----~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~  420 (515)
                      +.++|+.. .....|+-.|++.|+.+..+..|... |..++-..     ....-+.|-.+..+..||.+-......... 
T Consensus       492 d~~mil~~~~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~-  570 (794)
T PF08553_consen  492 DRNMILLDPNNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQ-  570 (794)
T ss_pred             ccceEeecCCCCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeecc-
Confidence            34444443 34578999999999999998877654 55544321     123445666788899999875321110000 


Q ss_pred             cceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEE
Q psy17610        421 LSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFL  500 (515)
Q Consensus       421 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~  500 (515)
                                    ...........+++-+.+| +||+|+.+|.||+||-...+....+++-. .+|..|..+.||++|+
T Consensus       571 --------------~k~Y~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~~g~~AKT~lp~lG-~pI~~iDvt~DGkwil  634 (794)
T PF08553_consen  571 --------------SKQYSSKNNFSCFATTEDG-YIAVGSNKGDIRLYDRLGKRAKTALPGLG-DPIIGIDVTADGKWIL  634 (794)
T ss_pred             --------------ccccccCCCceEEEecCCc-eEEEEeCCCcEEeecccchhhhhcCCCCC-CCeeEEEecCCCcEEE
Confidence                          0011122346777777666 78999999999999953323333445544 8999999999999988


Q ss_pred             EeecCCeEEEEE
Q psy17610        501 TGGADQIVKICL  512 (515)
Q Consensus       501 s~~~dg~v~iw~  512 (515)
                      +.+. ..+.+++
T Consensus       635 aTc~-tyLlLi~  645 (794)
T PF08553_consen  635 ATCK-TYLLLID  645 (794)
T ss_pred             Eeec-ceEEEEE
Confidence            7654 4455554

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>smart00320 WD40 WD40 repeats

Probab=97.71  E-value=0.00011  Score=41.98  Aligned_cols=39  Identities=31%  Similarity=0.631  Sum_probs=33.1

Q ss_pred             CeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEEEEE
Q psy17610        473 GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICL  512 (515)
Q Consensus       473 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~  512 (515)
                      ++++..+..|. ..|.++.|.++++++++++.|+.+++|+
T Consensus         2 ~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        2 GELLKTLKGHT-GPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             cEEEEEEEecC-CceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            34556666665 8899999999999999999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>PHA02713 hypothetical protein; Provisional

Probab=97.70  E-value=0.0052  Score=59.93  Aligned_cols=198  Identities=13%  Similarity=0.105  Sum_probs=102.6

Q ss_pred             eCCCEEEEEeCC------CeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCC-----cEEEEEccCCcee
Q psy17610        176 YDGKAILSGWND------GFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEG-----QVRIWKLTRESQS  244 (515)
Q Consensus       176 ~~~~~l~~~~~d------g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~iw~~~~~~~~  244 (515)
                      -++...+.|+.+      ..+..||+.++.....-+......-.+++ .-+|+..+.|+.++     .+..||..++...
T Consensus       302 l~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~~~~m~~~R~~~~~~-~~~g~IYviGG~~~~~~~~sve~Ydp~~~~W~  380 (557)
T PHA02713        302 VDNEIIIAGGYNFNNPSLNKVYKINIENKIHVELPPMIKNRCRFSLA-VIDDTIYAIGGQNGTNVERTIECYTMGDDKWK  380 (557)
T ss_pred             ECCEEEEEcCCCCCCCccceEEEEECCCCeEeeCCCCcchhhceeEE-EECCEEEEECCcCCCCCCceEEEEECCCCeEE
Confidence            356666677643      34778898877643221111111111222 22577777887654     4788998766555


Q ss_pred             eEEeeccccCceEEEEEecCCCEEEEEeCCC-----------------------cEEEEEcccceEEEEEEcCc-cEEEE
Q psy17610        245 LQCVLKEHTSSVSVIQIKSDSKEAMSASTDG-----------------------TCVLWDLIKSTRLIIMILPS-MIMSA  300 (515)
Q Consensus       245 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----------------------~i~iwd~~~~~~~~~~~~~~-~~~~~  300 (515)
                      ....++........+  .-++...+.|+.++                       .+..||..+.+-...-..+. .....
T Consensus       381 ~~~~mp~~r~~~~~~--~~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~~~~ve~YDP~td~W~~v~~m~~~r~~~~  458 (557)
T PHA02713        381 MLPDMPIALSSYGMC--VLDQYIYIIGGRTEHIDYTSVHHMNSIDMEEDTHSSNKVIRYDTVNNIWETLPNFWTGTIRPG  458 (557)
T ss_pred             ECCCCCcccccccEE--EECCEEEEEeCCCcccccccccccccccccccccccceEEEECCCCCeEeecCCCCcccccCc
Confidence            444333222222222  23667777776542                       46677776654332222211 11111


Q ss_pred             EEcCCCcEEEEEECC------CeEEEEeCCC-Cce--EEEEecCCCccEEEEEEcCCCCEEEEEcCCC--eEEEEEccCC
Q psy17610        301 AYHPSEVQLITCSTN------KMIDYWETCD-GSI--IRSLEGSDVAAVNCVDFVDDGKYFLTGGADQ--IVKMWMYREG  369 (515)
Q Consensus       301 ~~~~~~~~l~~~~~~------~~i~~~d~~~-~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~  369 (515)
                      +..-+++..+.|+.+      ..+..||..+ .+-  +..+..+. .......+  +|++.++|+.++  .+..||..+.
T Consensus       459 ~~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r-~~~~~~~~--~~~iyv~Gg~~~~~~~e~yd~~~~  535 (557)
T PHA02713        459 VVSHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRL-SALHTILH--DNTIMMLHCYESYMLQDTFNVYTY  535 (557)
T ss_pred             EEEECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCccc-ccceeEEE--CCEEEEEeeecceeehhhcCcccc
Confidence            223345666666543      2467899886 332  23332221 12222222  678899999888  6777887776


Q ss_pred             eeeeeccCCC
Q psy17610        370 VPCFVGIGHA  379 (515)
Q Consensus       370 ~~~~~~~~~~  379 (515)
                      +=......|.
T Consensus       536 ~W~~~~~~~~  545 (557)
T PHA02713        536 EWNHICHQHS  545 (557)
T ss_pred             cccchhhhcC
Confidence            5444334443

>KOG4499|consensus

Probab=97.68  E-value=0.0067  Score=49.30  Aligned_cols=134  Identities=12%  Similarity=0.182  Sum_probs=86.8

Q ss_pred             CCcEEEEEEecCCCEEEEEe-c---------CceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec-CCcEE
Q psy17610         81 DSGISSLQYNPVNNKVFVGT-V---------NCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS-KNDIR  149 (515)
Q Consensus        81 ~~~v~~~~~s~~~~~l~~~~-~---------d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-d~~i~  149 (515)
                      ....+.-..+|+|++.+ |. .         .|.++.|-...  ++..+.. .-+--+.++|+.+.+.+....+ +-+|.
T Consensus       108 knR~NDgkvdP~Gryy~-GtMad~~~~le~~~g~Ly~~~~~h--~v~~i~~-~v~IsNgl~Wd~d~K~fY~iDsln~~V~  183 (310)
T KOG4499|consen  108 KNRLNDGKVDPDGRYYG-GTMADFGDDLEPIGGELYSWLAGH--QVELIWN-CVGISNGLAWDSDAKKFYYIDSLNYEVD  183 (310)
T ss_pred             hcccccCccCCCCceee-eeeccccccccccccEEEEeccCC--Cceeeeh-hccCCccccccccCcEEEEEccCceEEe
Confidence            45566667799999843 33 1         24555555443  3333222 2333467899988777766655 77787


Q ss_pred             EEe--CCCCc-----eeEEEEe----cCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEc
Q psy17610        150 IWS--VRTLN-----ELLRISV----MNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAIT  218 (515)
Q Consensus       150 iw~--~~~~~-----~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~  218 (515)
                      -||  ..+|.     .+..++.    .....-.++...+|++.++....++|...|+.+|+.+.++. -....|++++|-
T Consensus       184 a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eik-lPt~qitsccFg  262 (310)
T KOG4499|consen  184 AYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIK-LPTPQITSCCFG  262 (310)
T ss_pred             eeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECCCCCcEEEEEE-cCCCceEEEEec
Confidence            888  55553     2333322    11112345556688888888899999999999999998884 457889999996


Q ss_pred             C
Q psy17610        219 Q  219 (515)
Q Consensus       219 ~  219 (515)
                      -
T Consensus       263 G  263 (310)
T KOG4499|consen  263 G  263 (310)
T ss_pred             C
Confidence            4

>KOG4640|consensus

Probab=97.67  E-value=0.00029  Score=65.21  Aligned_cols=94  Identities=14%  Similarity=0.120  Sum_probs=79.3

Q ss_pred             cCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC-ccEE-EEEEcCCCcEEEEEECCCeEEEEeCCCCceEE
Q psy17610        253 TSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP-SMIM-SAAYHPSEVQLITCSTNKMIDYWETCDGSIIR  330 (515)
Q Consensus       253 ~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~-~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~  330 (515)
                      ...+..+.|+|.-..+|.+..+|.+.+..++ .+++..+..+ .+++ +++|.|||+.+++|..||+|++.|..++..+.
T Consensus        20 ~~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~   98 (665)
T KOG4640|consen   20 PINIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLV   98 (665)
T ss_pred             ccceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCcee
Confidence            3457889999999999999999999999987 7777777744 4666 99999999999999999999999999999888


Q ss_pred             EEecCCCccEEEEEEcC
Q psy17610        331 SLEGSDVAAVNCVDFVD  347 (515)
Q Consensus       331 ~~~~~~~~~i~~~~~~~  347 (515)
                      .........+.++-|.+
T Consensus        99 ~~~~s~e~~is~~~w~~  115 (665)
T KOG4640|consen   99 SFLFSVETDISKGIWDR  115 (665)
T ss_pred             ccccccccchheeeccc
Confidence            75444446788888864

>COG5276 Uncharacterized conserved protein [Function unknown]

Probab=97.65  E-value=0.029  Score=47.52  Aligned_cols=319  Identities=11%  Similarity=0.043  Sum_probs=161.0

Q ss_pred             EEecCC-CcEEEEEEecCCCEEEEEecCceEEEEECCCCc--eeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEe
Q psy17610         76 YLLKDD-SGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGF--TLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWS  152 (515)
Q Consensus        76 ~~~~~~-~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~  152 (515)
                      .+.+|- ..|..+....+-.++..|-.--.+-+|+.....  .+.... .-.+-+..+.++.+  +...+..+.-++|.|
T Consensus        36 ~~vghfg~~vsavdv~~~ya~v~qG~~l~i~ditn~~~~t~~~l~~~i-~~~~l~~Dv~vse~--yvyvad~ssGL~IvD  112 (370)
T COG5276          36 AYVGHFGKGVSAVDVRGAYAYVGQGFILAILDITNVSLQTHDVLLSVI-NARDLFADVRVSEE--YVYVADWSSGLRIVD  112 (370)
T ss_pred             EEeeeccCCcccccccccccccccCceEeeccccCcccccCcceEEEE-ehhhhhheeEeccc--EEEEEcCCCceEEEe
Confidence            444554 566666655433333332211123334433111  111111 13455777888755  777777888899999


Q ss_pred             CCCCceeEEEEecC--eEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCce---EEEecCCCCCCeEEEEEcCCCCEEEEe
Q psy17610        153 VRTLNELLRISVMN--MICACIVFTYDGKAILSGWNDGFIRCFTPQSGKL---KFIIPNAHNRGVTALAITQDGTRLLSG  227 (515)
Q Consensus       153 ~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~  227 (515)
                      +.+......+..-.  +--.+  +.-.|++..++..+.-+.+.|+.+...   .... ......-..++.+  |++-..+
T Consensus       113 IS~P~sP~~~~~lnt~gyayg--v~vsGn~aYVadlddgfLivdvsdpssP~lagry-a~~~~d~~~v~IS--Gn~AYvA  187 (370)
T COG5276         113 ISTPDSPTLIGFLNTDGYAYG--VYVSGNYAYVADLDDGFLIVDVSDPSSPQLAGRY-ALPGGDTHDVAIS--GNYAYVA  187 (370)
T ss_pred             ccCCCCcceeccccCCceEEE--EEecCCEEEEeeccCcEEEEECCCCCCceeeeee-ccCCCCceeEEEe--cCeEEEE
Confidence            98766544332211  22233  344688888888555577788765432   2233 2233333556665  6677777


Q ss_pred             cCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEE---EcCccEEEEEEcC
Q psy17610        228 GGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIM---ILPSMIMSAAYHP  304 (515)
Q Consensus       228 ~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~---~~~~~~~~~~~~~  304 (515)
                      ..|+-+.+-|+..........-......+.++..+++..+++..  +.-+.+-|....+....+   +...+...-.+.-
T Consensus       188 ~~d~GL~ivDVSnp~sPvli~~~n~g~g~~sv~vsdnr~y~vvy--~egvlivd~s~~ssp~~~gsyet~~p~~~s~v~V  265 (370)
T COG5276         188 WRDGGLTIVDVSNPHSPVLIGSYNTGPGTYSVSVSDNRAYLVVY--DEGVLIVDVSGPSSPTVFGSYETSNPVSISTVPV  265 (370)
T ss_pred             EeCCCeEEEEccCCCCCeEEEEEecCCceEEEEecCCeeEEEEc--ccceEEEecCCCCCceEeeccccCCcccccceec
Confidence            88999999999755443332222223366777666654444433  334666776655533333   2222222213333


Q ss_pred             CCcEEEEEECCCeEEEEeCCCCce---EEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCC
Q psy17610        305 SEVQLITCSTNKMIDYWETCDGSI---IRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAAS  381 (515)
Q Consensus       305 ~~~~l~~~~~~~~i~~~d~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~  381 (515)
                      .+++......+.-+.+.|.....-   ...+.... .....+..+  +.++..+..+ ...+.+....+......+....
T Consensus       266 s~~~~Yvadga~gl~~idisnp~spfl~ss~~t~g-~~a~gi~ay--~~y~yiadkn-~g~vV~~s~~s~m~~~~g~~ti  341 (370)
T COG5276         266 SGEYAYVADGAKGLPIIDISNPPSPFLSSSLDTAG-YQAAGIRAY--GNYNYIADKN-TGAVVDASPPSMMDKRPGRPTI  341 (370)
T ss_pred             ccceeeeeccccCceeEeccCCCCCchhccccCCC-ccccceEEe--cCeeEeccCC-ceEEEeCCChhhcccccCcceE
Confidence            455555555555555555543221   11111111 122222222  3344444333 3344444333322222222233


Q ss_pred             eeEEEECCCCcEEEEEeCCCcEEEEeC
Q psy17610        382 ITKIKISPDKKVIVSVSADGGIFLWTF  408 (515)
Q Consensus       382 i~~~~~~~~~~~l~~~~~dg~i~iw~~  408 (515)
                      +.+.+.+-+.+.+.+...++.+.+|+.
T Consensus       342 ~~s~~v~~~~q~~y~~d~~~gl~i~~~  368 (370)
T COG5276         342 GQSCDVSVDTQIIYSTDYNGGLSIIEY  368 (370)
T ss_pred             eeecceEEEeeEEEEeecCCCEEEEEe
Confidence            344444445567888888999999975

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=97.65  E-value=0.029  Score=47.52  Aligned_cols=195  Identities=15%  Similarity=0.106  Sum_probs=122.2

Q ss_pred             eEEEecCCCCCCeEEEEEcCCCCEEEEecCCC--cEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcE
Q psy17610        200 LKFIIPNAHNRGVTALAITQDGTRLLSGGGEG--QVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTC  277 (515)
Q Consensus       200 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i  277 (515)
                      .+.+++.....-...+.|..+|.++-+.+.-|  .|+.+|+.+++......++. .---..++... ++.....=.++..
T Consensus        35 vv~~ypHd~~aFTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~-~~FgEGit~~~-d~l~qLTWk~~~~  112 (264)
T PF05096_consen   35 VVETYPHDPTAFTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPP-RYFGEGITILG-DKLYQLTWKEGTG  112 (264)
T ss_dssp             EEEEEE--TT-EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TT-T--EEEEEEET-TEEEEEESSSSEE
T ss_pred             EEEECCCCCcccCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCc-cccceeEEEEC-CEEEEEEecCCeE
Confidence            34555333344466788877787777777655  68888886554433333332 11223344433 3444445567899


Q ss_pred             EEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCC----CccEEEEEEcCCCCEEE
Q psy17610        278 VLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSD----VAAVNCVDFVDDGKYFL  353 (515)
Q Consensus       278 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~l~  353 (515)
                      .+||..+.+.+..+..+..-..++  .+++.|+.......++++|..+.+..+.+....    -..++.+.+- +|...|
T Consensus       113 f~yd~~tl~~~~~~~y~~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i-~G~IyA  189 (264)
T PF05096_consen  113 FVYDPNTLKKIGTFPYPGEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI-NGKIYA  189 (264)
T ss_dssp             EEEETTTTEEEEEEE-SSS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE-TTEEEE
T ss_pred             EEEccccceEEEEEecCCcceEEE--cCCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEE-cCEEEE
Confidence            999999999999998888777777  567888888888999999999888877765432    1346667775 677777


Q ss_pred             EEcCCCeEEEEEccCCeeeeecc------------C---CCCCeeEEEECCCCcEEEEEeC
Q psy17610        354 TGGADQIVKMWMYREGVPCFVGI------------G---HAASITKIKISPDKKVIVSVSA  399 (515)
Q Consensus       354 ~~~~dg~i~i~d~~~~~~~~~~~------------~---~~~~i~~~~~~~~~~~l~~~~~  399 (515)
                      =.-....|...|..+|+....+.            .   ...-.+.||+.|..+.|...+.
T Consensus       190 NVW~td~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTGK  250 (264)
T PF05096_consen  190 NVWQTDRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTGK  250 (264)
T ss_dssp             EETTSSEEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEET
T ss_pred             EeCCCCeEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEeC
Confidence            77777788888999998766441            1   1345789999986665554443

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>smart00320 WD40 WD40 repeats

Probab=97.58  E-value=0.00025  Score=40.37  Aligned_cols=38  Identities=37%  Similarity=0.524  Sum_probs=33.3

Q ss_pred             eeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEe
Q psy17610        370 VPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWT  407 (515)
Q Consensus       370 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~  407 (515)
                      ++...+..|...|.++.|++++.++++++.|+.+++|+
T Consensus         3 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        3 ELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             EEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            44556667889999999999999999999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>KOG4441|consensus

Probab=97.57  E-value=0.017  Score=56.32  Aligned_cols=228  Identities=14%  Similarity=0.157  Sum_probs=124.6

Q ss_pred             CCCEEEEEeCC------CeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCC------CcEEEEEccCCcee
Q psy17610        177 DGKAILSGWND------GFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGE------GQVRIWKLTRESQS  244 (515)
Q Consensus       177 ~~~~l~~~~~d------g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~iw~~~~~~~~  244 (515)
                      .+..++.|+..      ..+..||..+++............-.+++.. ++...++|+.|      ..+..||...++..
T Consensus       284 ~~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~~~r~~~~~~~~-~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~  362 (571)
T KOG4441|consen  284 SGKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMPSPRCRVGVAVL-NGKLYVVGGYDSGSDRLSSVERYDPRTNQWT  362 (571)
T ss_pred             CCeEEEECCCCCCCcccceeEEecCCcCcEeecCCCCcccccccEEEE-CCEEEEEccccCCCcccceEEEecCCCCcee
Confidence            34556666665      3688899988866554433344444455554 45677888888      35777888766654


Q ss_pred             eEEeeccccCceEEEEEecCCCEEEEEeCCCc-----EEEEEcccceEEEEEEcCccEEEEE-EcCCCcEEEEEECC---
Q psy17610        245 LQCVLKEHTSSVSVIQIKSDSKEAMSASTDGT-----CVLWDLIKSTRLIIMILPSMIMSAA-YHPSEVQLITCSTN---  315 (515)
Q Consensus       245 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-----i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~---  315 (515)
                      ....+..........  .-+|...+.|+.||.     +..||..+.+-...-.........+ ..-++...++|+.+   
T Consensus       363 ~~a~M~~~R~~~~v~--~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~~r~~~gv~~~~g~iYi~GG~~~~~  440 (571)
T KOG4441|consen  363 PVAPMNTKRSDFGVA--VLDGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLTRRSGHGVAVLGGKLYIIGGGDGSS  440 (571)
T ss_pred             ccCCccCccccceeE--EECCEEEEEeccccccccccEEEecCCCCcccccCCCCcceeeeEEEEECCEEEEEcCcCCCc
Confidence            443333322222222  236778888888864     6677766554332222222222222 23356666777644   


Q ss_pred             ---CeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCC-----eEEEEEccCCeeeee--ccCCCCCeeEE
Q psy17610        316 ---KMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQ-----IVKMWMYREGVPCFV--GIGHAASITKI  385 (515)
Q Consensus       316 ---~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~--~~~~~~~i~~~  385 (515)
                         ..+..||..+++-...-.......-..++. -++.++++|+.|+     .+..||..+.+-...  .......+...
T Consensus       441 ~~l~sve~YDP~t~~W~~~~~M~~~R~~~g~a~-~~~~iYvvGG~~~~~~~~~VE~ydp~~~~W~~v~~m~~~rs~~g~~  519 (571)
T KOG4441|consen  441 NCLNSVECYDPETNTWTLIAPMNTRRSGFGVAV-LNGKIYVVGGFDGTSALSSVERYDPETNQWTMVAPMTSPRSAVGVV  519 (571)
T ss_pred             cccceEEEEcCCCCceeecCCcccccccceEEE-ECCEEEEECCccCCCccceEEEEcCCCCceeEcccCccccccccEE
Confidence               357788887765433322221111112222 3578888888876     367788776543322  22222222222


Q ss_pred             EECCCCcEEEEEeCCCc-----EEEEeCCC
Q psy17610        386 KISPDKKVIVSVSADGG-----IFLWTFPE  410 (515)
Q Consensus       386 ~~~~~~~~l~~~~~dg~-----i~iw~~~~  410 (515)
                      .+  +++..++|+.||.     +..||...
T Consensus       520 ~~--~~~ly~vGG~~~~~~l~~ve~ydp~~  547 (571)
T KOG4441|consen  520 VL--GGKLYAVGGFDGNNNLNTVECYDPET  547 (571)
T ss_pred             EE--CCEEEEEecccCccccceeEEcCCCC
Confidence            33  5667777877764     55665443

>COG5276 Uncharacterized conserved protein [Function unknown]

Probab=97.57  E-value=0.038  Score=46.79  Aligned_cols=203  Identities=13%  Similarity=0.146  Sum_probs=117.7

Q ss_pred             EEEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCc-cCeEEEEeCCCCcEEEEEecCCcEEEEe
Q psy17610         74 ALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHT-SAIYDLQFPVNFSSVFATCSKNDIRIWS  152 (515)
Q Consensus        74 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~~~~~d~~i~iw~  152 (515)
                      .+....-.+-+..+.++  +++...+..+.-++|.|+.+.......-.-.. +--.++..+  |++..++.-|.-+.+.|
T Consensus        79 l~~~i~~~~l~~Dv~vs--e~yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gyaygv~vs--Gn~aYVadlddgfLivd  154 (370)
T COG5276          79 LLSVINARDLFADVRVS--EEYVYVADWSSGLRIVDISTPDSPTLIGFLNTDGYAYGVYVS--GNYAYVADLDDGFLIVD  154 (370)
T ss_pred             eEEEEehhhhhheeEec--ccEEEEEcCCCceEEEeccCCCCcceeccccCCceEEEEEec--CCEEEEeeccCcEEEEE
Confidence            34445556777888887  56677777777799999988655554332222 333445554  66888888777788888


Q ss_pred             CCCCce---eEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEec-CCCCCCeEEEEEcCCCCEEEEec
Q psy17610        153 VRTLNE---LLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIP-NAHNRGVTALAITQDGTRLLSGG  228 (515)
Q Consensus       153 ~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~  228 (515)
                      +.+.+.   ..++.........++.|  |++-..+..|+-+.+.|+........+. ......+.++..+++-.+++...
T Consensus       155 vsdpssP~lagrya~~~~d~~~v~IS--Gn~AYvA~~d~GL~ivDVSnp~sPvli~~~n~g~g~~sv~vsdnr~y~vvy~  232 (370)
T COG5276         155 VSDPSSPQLAGRYALPGGDTHDVAIS--GNYAYVAWRDGGLTIVDVSNPHSPVLIGSYNTGPGTYSVSVSDNRAYLVVYD  232 (370)
T ss_pred             CCCCCCceeeeeeccCCCCceeEEEe--cCeEEEEEeCCCeEEEEccCCCCCeEEEEEecCCceEEEEecCCeeEEEEcc
Confidence            876542   33344444433455554  6777788888889999987654322221 12233677888887655555443


Q ss_pred             CCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEccc
Q psy17610        229 GEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIK  284 (515)
Q Consensus       229 ~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~  284 (515)
                        .-+.+-|....+...+.-......++..-.+.-.+++...+..+.-+-+-|+.+
T Consensus       233 --egvlivd~s~~ssp~~~gsyet~~p~~~s~v~Vs~~~~Yvadga~gl~~idisn  286 (370)
T COG5276         233 --EGVLIVDVSGPSSPTVFGSYETSNPVSISTVPVSGEYAYVADGAKGLPIIDISN  286 (370)
T ss_pred             --cceEEEecCCCCCceEeeccccCCcccccceecccceeeeeccccCceeEeccC
Confidence              346777775443322222222222222212333455666666555555556544

>PHA02713 hypothetical protein; Provisional

Probab=97.57  E-value=0.0084  Score=58.54  Aligned_cols=217  Identities=8%  Similarity=-0.002  Sum_probs=109.8

Q ss_pred             eEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCC------CcEEEEEccCCceeeEEeeccccCceEEEEEe
Q psy17610        189 FIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGE------GQVRIWKLTRESQSLQCVLKEHTSSVSVIQIK  262 (515)
Q Consensus       189 ~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~  262 (515)
                      .+..||..+++....-+.+....-.+++. -++...+.|+.+      ..+..||...+.......+....... + ...
T Consensus       273 ~v~~yd~~~~~W~~l~~mp~~r~~~~~a~-l~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~~~~m~~~R~~~-~-~~~  349 (557)
T PHA02713        273 CILVYNINTMEYSVISTIPNHIINYASAI-VDNEIIIAGGYNFNNPSLNKVYKINIENKIHVELPPMIKNRCRF-S-LAV  349 (557)
T ss_pred             CEEEEeCCCCeEEECCCCCccccceEEEE-ECCEEEEEcCCCCCCCccceEEEEECCCCeEeeCCCCcchhhce-e-EEE
Confidence            46778888776443221111111122222 256677777753      34777887655443333332211111 1 223


Q ss_pred             cCCCEEEEEeCCC-----cEEEEEcccceEEEEEEcCccEE-EEEEcCCCcEEEEEECC---------------------
Q psy17610        263 SDSKEAMSASTDG-----TCVLWDLIKSTRLIIMILPSMIM-SAAYHPSEVQLITCSTN---------------------  315 (515)
Q Consensus       263 ~~~~~l~~~~~d~-----~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~---------------------  315 (515)
                      -+++..+.|+.++     ++..||..+.+-...-..+.+.. ..+..-++...+.|+.+                     
T Consensus       350 ~~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r~~~~~~~~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~  429 (557)
T PHA02713        350 IDDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSSYGMCVLDQYIYIIGGRTEHIDYTSVHHMNSIDMEEDTH  429 (557)
T ss_pred             ECCEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCcccccccEEEECCEEEEEeCCCccccccccccccccccccccc
Confidence            3667777777654     47888887664333222222211 11112356666666654                     


Q ss_pred             --CeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCC------CeEEEEEccC-C--eeeeeccCCCCCeeE
Q psy17610        316 --KMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGAD------QIVKMWMYRE-G--VPCFVGIGHAASITK  384 (515)
Q Consensus       316 --~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d------g~i~i~d~~~-~--~~~~~~~~~~~~i~~  384 (515)
                        ..+..||..+.+-...-.... .....-...-++++.+.|+.+      ..+..||.++ .  +.+..+.........
T Consensus       430 ~~~~ve~YDP~td~W~~v~~m~~-~r~~~~~~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~  508 (557)
T PHA02713        430 SSNKVIRYDTVNNIWETLPNFWT-GTIRPGVVSHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHT  508 (557)
T ss_pred             ccceEEEECCCCCeEeecCCCCc-ccccCcEEEECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCccccccee
Confidence              247778877654322211111 111111222356777777754      2467898876 3  333333333333333


Q ss_pred             EEECCCCcEEEEEeCCC--cEEEEeCCCC
Q psy17610        385 IKISPDKKVIVSVSADG--GIFLWTFPEL  411 (515)
Q Consensus       385 ~~~~~~~~~l~~~~~dg--~i~iw~~~~~  411 (515)
                      ..+  +++..++|+.++  .+..||..+.
T Consensus       509 ~~~--~~~iyv~Gg~~~~~~~e~yd~~~~  535 (557)
T PHA02713        509 ILH--DNTIMMLHCYESYMLQDTFNVYTY  535 (557)
T ss_pred             EEE--CCEEEEEeeecceeehhhcCcccc
Confidence            333  778888998888  5666666543

>KOG2444|consensus

Probab=97.54  E-value=0.00012  Score=59.00  Aligned_cols=143  Identities=9%  Similarity=0.017  Sum_probs=90.5

Q ss_pred             EEEEEeCCCcEEEEEcccceEEEEEE-cCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceE-EEEecCCCccEEE-E
Q psy17610        267 EAMSASTDGTCVLWDLIKSTRLIIMI-LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSII-RSLEGSDVAAVNC-V  343 (515)
Q Consensus       267 ~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~i~~-~  343 (515)
                      .+...+.||.|+-++++..+...... .....  .....-+..+++|+.+|.|++|........ ....... ..+.+ +
T Consensus        32 ~l~~~sa~~~v~~~~~~k~k~s~rse~~~~e~--~~v~~~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~-e~i~~~I  108 (238)
T KOG2444|consen   32 LLRATSADGLVRERKVRKHKESCRSERFIDEG--QRVVTASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGE-ESIDLGI  108 (238)
T ss_pred             hhccccCCcccccchhhhhhhhhhhhhhhhcc--eeecccCceEEeecccceEEEecCCccchHHHhhhccc-ccceecc
Confidence            35556777888877765432211100 00001  222334567889999999999987622111 1111111 23333 2


Q ss_pred             EEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCC-CCeeEEEECCCCcEEEEE--eCCCcEEEEeCCCCc
Q psy17610        344 DFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHA-ASITKIKISPDKKVIVSV--SADGGIFLWTFPELE  412 (515)
Q Consensus       344 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~--~~dg~i~iw~~~~~~  412 (515)
                      .-..++.+..+++.+|.|+.|++...+.+.....|. .++..+..+..++.++.+  |.|..++.|++....
T Consensus       109 p~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~~~  180 (238)
T KOG2444|consen  109 PNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVEKIK  180 (238)
T ss_pred             ccccccceeEEeccCCceeeeccccCceeeeeccccCCCcceeEEecCCceEEeeccccchhhhhcchhhhh
Confidence            333456688899999999999999988888877787 677777777777777777  778888888887644

>KOG1898|consensus

Probab=97.51  E-value=0.13  Score=51.58  Aligned_cols=108  Identities=16%  Similarity=0.145  Sum_probs=66.4

Q ss_pred             EEEEEEecCCCEEEEEecCceEEEEECCCCceeEEee--ccCccCeEEEEeCCCC------cEEEEEecCCcEEEEeCCC
Q psy17610         84 ISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVN--TCHTSAIYDLQFPVNF------SSVFATCSKNDIRIWSVRT  155 (515)
Q Consensus        84 v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~--~~h~~~v~~~~~~~~~------~~l~~~~~d~~i~iw~~~~  155 (515)
                      |.+.+.  +.+.++.+..+|.+.-+......++..+.  ..-...|.|+++.++.      ++++.++.|+.+++..+..
T Consensus       542 Iv~~av--nr~qiVvalSngelvyfe~d~sgql~E~~er~tl~~~vac~ai~~~~~g~krsrfla~a~~d~~vriisL~p  619 (1205)
T KOG1898|consen  542 IVKCAV--NRRQIVVALSNGELVYFEGDVSGQLNEFTERVTLSTDVACLAIGQDPEGEKRSRFLALASVDNMVRIISLDP  619 (1205)
T ss_pred             EEEEee--cceEEEEEccCCeEEEEEeccCccceeeeeeeeeceeehhhccCCCCcchhhcceeeeeccccceeEEEecC
Confidence            444444  35667777788887777665333333332  2234578899998764      5688888899999999987


Q ss_pred             CceeEEEE--ecCeEEEEEEEee---CC------CEEEEEeCCCeEEEE
Q psy17610        156 LNELLRIS--VMNMICACIVFTY---DG------KAILSGWNDGFIRCF  193 (515)
Q Consensus       156 ~~~~~~~~--~~~~~v~~~~~~~---~~------~~l~~~~~dg~i~~~  193 (515)
                      ..++..+.  +-..++.++.+-+   ++      -+|.+|-.+|.+.-+
T Consensus       620 ~d~l~~ls~q~l~~~~~s~~iv~~~~~~~~~~~~L~l~~GL~NGvllR~  668 (1205)
T KOG1898|consen  620 SDCLQPLSVQGLSSPPESLCIVEMEATGGTDVAQLYLLIGLRNGVLLRF  668 (1205)
T ss_pred             cceEEEccccccCCCccceEEEEecccCCccceeEEEEecccccEEEEE
Confidence            66666654  2333444444433   22      245577777765433

>KOG2079|consensus

Probab=97.49  E-value=0.0036  Score=62.15  Aligned_cols=98  Identities=16%  Similarity=0.221  Sum_probs=75.2

Q ss_pred             CCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEE
Q psy17610         92 VNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICAC  171 (515)
Q Consensus        92 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~  171 (515)
                      .+..++.|+..|.+...|+...-.....-..-.++|++++|+.+|+.++.|-.+|.|.+||+.+++.++.+..+..+.+.
T Consensus        98 ~~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~  177 (1206)
T KOG2079|consen   98 VVVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTG  177 (1206)
T ss_pred             eeeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccce
Confidence            56778999999999999987632211222234679999999999999999999999999999999999998877766554


Q ss_pred             EE---EeeCCCEEEEEeCCCe
Q psy17610        172 IV---FTYDGKAILSGWNDGF  189 (515)
Q Consensus       172 ~~---~~~~~~~l~~~~~dg~  189 (515)
                      +-   +..++..++++...|.
T Consensus       178 vi~v~~t~~nS~llt~D~~Gs  198 (1206)
T KOG2079|consen  178 VIFVGRTSQNSKLLTSDTGGS  198 (1206)
T ss_pred             EEEEEEeCCCcEEEEccCCCc
Confidence            43   4445566778777775

>PRK10115 protease 2; Provisional

Probab=97.49  E-value=0.14  Score=51.45  Aligned_cols=239  Identities=8%  Similarity=0.052  Sum_probs=124.1

Q ss_pred             CcEEEEEEecCCCEEEEEec-----CceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecC------CcEEE
Q psy17610         82 SGISSLQYNPVNNKVFVGTV-----NCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSK------NDIRI  150 (515)
Q Consensus        82 ~~v~~~~~s~~~~~l~~~~~-----d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d------~~i~i  150 (515)
                      -.+..+.+|||+++||.+..     ...|++.|+.+|..+...+.+ .  -..++|++|++.++.+..+      ..|..
T Consensus       127 ~~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~-~--~~~~~w~~D~~~~~y~~~~~~~~~~~~v~~  203 (686)
T PRK10115        127 YTLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDN-V--EPSFVWANDSWTFYYVRKHPVTLLPYQVWR  203 (686)
T ss_pred             EEEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccC-c--ceEEEEeeCCCEEEEEEecCCCCCCCEEEE
Confidence            34777899999999988643     356999999987544333322 1  1569999999888777552      35788


Q ss_pred             EeCCCC--ceeEEEEecCeEEE-EEEEeeCCCEEEEEeC---CCeEEEEec--CCCceEEEecCCCCCCeEEEEEcCCCC
Q psy17610        151 WSVRTL--NELLRISVMNMICA-CIVFTYDGKAILSGWN---DGFIRCFTP--QSGKLKFIIPNAHNRGVTALAITQDGT  222 (515)
Q Consensus       151 w~~~~~--~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~---dg~i~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~  222 (515)
                      +++.++  +....+........ ....+.++++++..+.   ++.+.+++.  .+++....+....... ..+. +..+.
T Consensus       204 h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~  281 (686)
T PRK10115        204 HTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAELADAEPFVFLPRRKDHE-YSLD-HYQHR  281 (686)
T ss_pred             EECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECcCCCCCceEEEECCCCCE-EEEE-eCCCE
Confidence            888887  33334443333233 3333447887765443   357888884  2344332232222222 2222 22333


Q ss_pred             EEEEecC---CCcEEEEEccCCceeeEEeecccc-CceEEEEEecCCCEEEEEeCCCcEEEEEccc-ceEEEEEEc--Cc
Q psy17610        223 RLLSGGG---EGQVRIWKLTRESQSLQCVLKEHT-SSVSVIQIKSDSKEAMSASTDGTCVLWDLIK-STRLIIMIL--PS  295 (515)
Q Consensus       223 ~l~~~~~---d~~i~iw~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~--~~  295 (515)
                      +++....   ...|...++.. .......+.... ..+..+.+. .+..+++...++.-+++-+.. +.....+..  +.
T Consensus       282 ly~~tn~~~~~~~l~~~~~~~-~~~~~~l~~~~~~~~i~~~~~~-~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~  359 (686)
T PRK10115        282 FYLRSNRHGKNFGLYRTRVRD-EQQWEELIPPRENIMLEGFTLF-TDWLVVEERQRGLTSLRQINRKTREVIGIAFDDPA  359 (686)
T ss_pred             EEEEEcCCCCCceEEEecCCC-cccCeEEECCCCCCEEEEEEEE-CCEEEEEEEeCCEEEEEEEcCCCCceEEecCCCCc
Confidence            3332222   22333334431 122222333323 367777776 334555666666655544332 223333332  22


Q ss_pred             cEEEEEEc--CCCc-EEEEEEC---CCeEEEEeCCCCc
Q psy17610        296 MIMSAAYH--PSEV-QLITCST---NKMIDYWETCDGS  327 (515)
Q Consensus       296 ~~~~~~~~--~~~~-~l~~~~~---~~~i~~~d~~~~~  327 (515)
                      .+..+..+  +++. .++..+.   -+.+..+|..+++
T Consensus       360 ~~~~~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~~~~  397 (686)
T PRK10115        360 YVTWIAYNPEPETSRLRYGYSSMTTPDTLFELDMDTGE  397 (686)
T ss_pred             eEeeecccCCCCCceEEEEEecCCCCCEEEEEECCCCc
Confidence            23333344  4444 3333322   4678888987764

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=97.48  E-value=0.00059  Score=40.43  Aligned_cols=33  Identities=21%  Similarity=0.401  Sum_probs=29.9

Q ss_pred             cCCCcEEEEEEecCCCEEEEEecCceEEEEECC
Q psy17610         79 KDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMN  111 (515)
Q Consensus        79 ~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~  111 (515)
                      .....|.+++|+|..++||.++.+|.|.++.++
T Consensus         9 ~l~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~   41 (47)
T PF12894_consen    9 NLPSRVSCMSWCPTMDLIALGTEDGEVLVYRLN   41 (47)
T ss_pred             CCCCcEEEEEECCCCCEEEEEECCCeEEEEECC
Confidence            345779999999999999999999999999994

>KOG2444|consensus

Probab=97.39  E-value=0.0002  Score=57.67  Aligned_cols=135  Identities=16%  Similarity=0.177  Sum_probs=73.2

Q ss_pred             EEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceE-EE
Q psy17610        181 ILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVS-VI  259 (515)
Q Consensus       181 l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~-~~  259 (515)
                      +..-+.+|.++-+++...+....-...+...-.   .-.-+..+++|+.+|.|.+|+......... ....-...|. .+
T Consensus        33 l~~~sa~~~v~~~~~~k~k~s~rse~~~~e~~~---v~~~~~~~~vG~~dg~v~~~n~n~~g~~~d-~~~s~~e~i~~~I  108 (238)
T KOG2444|consen   33 LRATSADGLVRERKVRKHKESCRSERFIDEGQR---VVTASAKLMVGTSDGAVYVFNWNLEGAHSD-RVCSGEESIDLGI  108 (238)
T ss_pred             hccccCCcccccchhhhhhhhhhhhhhhhccee---ecccCceEEeecccceEEEecCCccchHHH-hhhcccccceecc
Confidence            344556777777776554332221112222211   112345688999999999999852221111 1111222232 22


Q ss_pred             EEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCC
Q psy17610        260 QIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDG  326 (515)
Q Consensus       260 ~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~  326 (515)
                      .-..++.+..+++.||.|+.|++...+.+.....+..       .++..+++.+.++.+.+|++...
T Consensus       109 p~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~-------~~~e~~ivv~sd~~i~~a~~S~d  168 (238)
T KOG2444|consen  109 PNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNF-------ESGEELIVVGSDEFLKIADTSHD  168 (238)
T ss_pred             ccccccceeEEeccCCceeeeccccCceeeeeccccC-------CCcceeEEecCCceEEeeccccc
Confidence            3334556788999999999999987777665544431       23344444445555555544443

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=97.36  E-value=0.09  Score=46.29  Aligned_cols=279  Identities=14%  Similarity=0.126  Sum_probs=127.8

Q ss_pred             CCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccc----cCceEEEEEecCCCEEEEEeCCCcEEEEE
Q psy17610        206 NAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEH----TSSVSVIQIKSDSKEAMSASTDGTCVLWD  281 (515)
Q Consensus       206 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~d~~i~iwd  281 (515)
                      .+-..++..|.|..+..-+++|.. +.|  +...............-    ......+.|..+ ..++ ++..+ +.+..
T Consensus        13 l~t~~~l~dV~F~d~~~G~~VG~~-g~i--l~T~DGG~tW~~~~~~~~~~~~~~l~~I~f~~~-~g~i-vG~~g-~ll~T   86 (302)
T PF14870_consen   13 LPTDKPLLDVAFVDPNHGWAVGAY-GTI--LKTTDGGKTWQPVSLDLDNPFDYHLNSISFDGN-EGWI-VGEPG-LLLHT   86 (302)
T ss_dssp             -S-SS-EEEEEESSSS-EEEEETT-TEE--EEESSTTSS-EE-----S-----EEEEEEEETT-EEEE-EEETT-EEEEE
T ss_pred             cCCCCceEEEEEecCCEEEEEecC-CEE--EEECCCCccccccccCCCccceeeEEEEEecCC-ceEE-EcCCc-eEEEe
Confidence            456678999999966666676654 433  33322222211111111    123556666543 3333 44444 33333


Q ss_pred             cccceEEEEEE----cCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcC
Q psy17610        282 LIKSTRLIIMI----LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA  357 (515)
Q Consensus       282 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~  357 (515)
                      ...++.-..+.    .+.....+....++...+ .+..|.|+.= ...++.=..+.....+.+..+..++||++++++..
T Consensus        87 ~DgG~tW~~v~l~~~lpgs~~~i~~l~~~~~~l-~~~~G~iy~T-~DgG~tW~~~~~~~~gs~~~~~r~~dG~~vavs~~  164 (302)
T PF14870_consen   87 TDGGKTWERVPLSSKLPGSPFGITALGDGSAEL-AGDRGAIYRT-TDGGKTWQAVVSETSGSINDITRSSDGRYVAVSSR  164 (302)
T ss_dssp             SSTTSS-EE----TT-SS-EEEEEEEETTEEEE-EETT--EEEE-SSTTSSEEEEE-S----EEEEEE-TTS-EEEEETT
T ss_pred             cCCCCCcEEeecCCCCCCCeeEEEEcCCCcEEE-EcCCCcEEEe-CCCCCCeeEcccCCcceeEeEEECCCCcEEEEECc
Confidence            33343333322    223333344333443333 3445544332 22333333333333477888999999999999887


Q ss_pred             CCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceee
Q psy17610        358 DQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLII  437 (515)
Q Consensus       358 dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  437 (515)
                      .....-||--...-...-+.-...|.+|.|.|++.+.+.+ ..|.|+.=+...........               ....
T Consensus       165 G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~~~~~w~~~---------------~~~~  228 (302)
T PF14870_consen  165 GNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPDDGETWSEP---------------IIPI  228 (302)
T ss_dssp             SSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TTEEEEE------------------B-TT
T ss_pred             ccEEEEecCCCccceEEccCccceehhceecCCCCEEEEe-CCcEEEEccCCCCccccccc---------------cCCc
Confidence            6666677754321122223456889999999998876655 88888876622211100000               0000


Q ss_pred             ecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecc--cccceEEEEEEcCCCcEEEEeecCCeEEEE
Q psy17610        438 MILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEG--SDVAAVNCVDFVDDGKYFLTGGADQIVKIC  511 (515)
Q Consensus       438 ~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw  511 (515)
                      ....-.+..++|.+++...|+|+ .|.+ +.....|+--+.-+.  .-...++.+.|.++.+-++ -+.+|.+.-|
T Consensus       229 ~~~~~~~ld~a~~~~~~~wa~gg-~G~l-~~S~DgGktW~~~~~~~~~~~n~~~i~f~~~~~gf~-lG~~G~ll~~  301 (302)
T PF14870_consen  229 KTNGYGILDLAYRPPNEIWAVGG-SGTL-LVSTDGGKTWQKDRVGENVPSNLYRIVFVNPDKGFV-LGQDGVLLRY  301 (302)
T ss_dssp             SS--S-EEEEEESSSS-EEEEES-TT-E-EEESSTTSS-EE-GGGTTSSS---EEEEEETTEEEE-E-STTEEEEE
T ss_pred             ccCceeeEEEEecCCCCEEEEeC-CccE-EEeCCCCccceECccccCCCCceEEEEEcCCCceEE-ECCCcEEEEe
Confidence            00112378999999988888766 4434 444555654433332  2226788999987666555 5678877655

>KOG4441|consensus

Probab=97.33  E-value=0.036  Score=54.07  Aligned_cols=230  Identities=14%  Similarity=0.132  Sum_probs=122.6

Q ss_pred             ecCCCEEEEEecC------ceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecC------CcEEEEeCCCCc
Q psy17610         90 NPVNNKVFVGTVN------CEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSK------NDIRIWSVRTLN  157 (515)
Q Consensus        90 s~~~~~l~~~~~d------~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d------~~i~iw~~~~~~  157 (515)
                      +..+.++++|+.+      ..+..+|..++.-.......+...-.+++...+ ...++|+.+      .++..||..+.+
T Consensus       282 ~~~~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~~~r~~~~~~~~~~-~lYv~GG~~~~~~~l~~ve~YD~~~~~  360 (571)
T KOG4441|consen  282 SVSGKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMPSPRCRVGVAVLNG-KLYVVGGYDSGSDRLSSVERYDPRTNQ  360 (571)
T ss_pred             CCCCeEEEECCCCCCCcccceeEEecCCcCcEeecCCCCcccccccEEEECC-EEEEEccccCCCcccceEEEecCCCCc
Confidence            3345667777766      468889988852222211123333455555544 566666667      346777777655


Q ss_pred             eeE--EEEecCeEEEEEEEeeCCCEEEEEeCCC-----eEEEEecCCCceEEEecCCCCCCeEEEEEc-CCCCEEEEecC
Q psy17610        158 ELL--RISVMNMICACIVFTYDGKAILSGWNDG-----FIRCFTPQSGKLKFIIPNAHNRGVTALAIT-QDGTRLLSGGG  229 (515)
Q Consensus       158 ~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~  229 (515)
                      =..  .+........  .-.-+|...++|+.||     ++..||..+.+....-  ............ -+|...++|+.
T Consensus       361 W~~~a~M~~~R~~~~--v~~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va--~m~~~r~~~gv~~~~g~iYi~GG~  436 (571)
T KOG4441|consen  361 WTPVAPMNTKRSDFG--VAVLDGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVA--PMLTRRSGHGVAVLGGKLYIIGGG  436 (571)
T ss_pred             eeccCCccCccccce--eEEECCEEEEEeccccccccccEEEecCCCCcccccC--CCCcceeeeEEEEECCEEEEEcCc
Confidence            221  1111111111  1123677788888886     4778888877654332  122222222222 26777788875


Q ss_pred             CC------cEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCc-----EEEEEcccceEEEEEEcCccEE
Q psy17610        230 EG------QVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGT-----CVLWDLIKSTRLIIMILPSMIM  298 (515)
Q Consensus       230 d~------~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-----i~iwd~~~~~~~~~~~~~~~~~  298 (515)
                      ++      .+..||..++.......+........ ++ .-++...+.|+.|+.     |..||..+.+-...-....+..
T Consensus       437 ~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~~~g-~a-~~~~~iYvvGG~~~~~~~~~VE~ydp~~~~W~~v~~m~~~rs  514 (571)
T KOG4441|consen  437 DGSSNCLNSVECYDPETNTWTLIAPMNTRRSGFG-VA-VLNGKIYVVGGFDGTSALSSVERYDPETNQWTMVAPMTSPRS  514 (571)
T ss_pred             CCCccccceEEEEcCCCCceeecCCcccccccce-EE-EECCEEEEECCccCCCccceEEEEcCCCCceeEcccCccccc
Confidence            54      57788887776665555443333222 22 235677777877763     6778877665544432222222


Q ss_pred             EEEE-cCCCcEEEEEECCC-----eEEEEeCCCC
Q psy17610        299 SAAY-HPSEVQLITCSTNK-----MIDYWETCDG  326 (515)
Q Consensus       299 ~~~~-~~~~~~l~~~~~~~-----~i~~~d~~~~  326 (515)
                      .... .-++...++|+.++     ++..||..+.
T Consensus       515 ~~g~~~~~~~ly~vGG~~~~~~l~~ve~ydp~~d  548 (571)
T KOG4441|consen  515 AVGVVVLGGKLYAVGGFDGNNNLNTVECYDPETD  548 (571)
T ss_pred             cccEEEECCEEEEEecccCccccceeEEcCCCCC
Confidence            2222 22455566666654     3555655544

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=97.32  E-value=0.091  Score=45.48  Aligned_cols=147  Identities=18%  Similarity=0.117  Sum_probs=92.2

Q ss_pred             CeEEEEeCCCCcEEEEEe--c-CCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEe-cCCCceE
Q psy17610        126 AIYDLQFPVNFSSVFATC--S-KNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFT-PQSGKLK  201 (515)
Q Consensus       126 ~v~~~~~~~~~~~l~~~~--~-d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~-~~~~~~~  201 (515)
                      .+.+.+.+++++.+++..  . ...+.++..  +....... ....+....|++++...+....+...+++. ..+++..
T Consensus        25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~--~~~~~~~~-~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~  101 (253)
T PF10647_consen   25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPA--GGPVRPVL-TGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGE  101 (253)
T ss_pred             cccceEECCCCCeEEEEEEcCCCCEEEEEcC--CCcceeec-cCCccccccccCCCCEEEEEcCCCceEEEEecCCCcce
Confidence            688999999999888877  2 344555544  33333332 233677889999987777766666666663 3333322


Q ss_pred             E-EecCCCC-CCeEEEEEcCCCCEEEEec---CCCcEEEEEccCCcee-------eEEeeccccCceEEEEEecCCCEEE
Q psy17610        202 F-IIPNAHN-RGVTALAITQDGTRLLSGG---GEGQVRIWKLTRESQS-------LQCVLKEHTSSVSVIQIKSDSKEAM  269 (515)
Q Consensus       202 ~-~~~~~~~-~~v~~~~~~~~~~~l~~~~---~d~~i~iw~~~~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~l~  269 (515)
                      . .+..... ..|+.+.++|||..++...   .++.|.+--+......       ...........+..+.|.+++.+++
T Consensus       102 ~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~V  181 (253)
T PF10647_consen  102 PVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLVV  181 (253)
T ss_pred             eEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCCEEEE
Confidence            1 2211212 2899999999999888655   3477777665422211       1122223356789999999988777


Q ss_pred             EEeCCC
Q psy17610        270 SASTDG  275 (515)
Q Consensus       270 ~~~~d~  275 (515)
                      .+...+
T Consensus       182 ~~~~~~  187 (253)
T PF10647_consen  182 LGRSAG  187 (253)
T ss_pred             EeCCCC
Confidence            666544

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>KOG2395|consensus

Probab=97.30  E-value=0.006  Score=55.74  Aligned_cols=144  Identities=12%  Similarity=0.121  Sum_probs=102.2

Q ss_pred             CCCEE-EEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCc-------EEEEEECCCeEEEEeCCCCce--EEEEe
Q psy17610        264 DSKEA-MSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEV-------QLITCSTNKMIDYWETCDGSI--IRSLE  333 (515)
Q Consensus       264 ~~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-------~l~~~~~~~~i~~~d~~~~~~--~~~~~  333 (515)
                      +.+++ .++.....++-.|++.++.+........|.-+.+.|+.+       .-+.|-.+..|.-||.+-...  +....
T Consensus       344 dsnlil~~~~~~~~l~klDIE~GKIVeEWk~~~di~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q  423 (644)
T KOG2395|consen  344 DSNLILMDGGEQDKLYKLDIERGKIVEEWKFEDDINMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQ  423 (644)
T ss_pred             ccceEeeCCCCcCcceeeecccceeeeEeeccCCcceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeee
Confidence            33443 345555678889999999999998888888888888653       235677788899999874332  22222


Q ss_pred             cC---CCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCC
Q psy17610        334 GS---DVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFP  409 (515)
Q Consensus       334 ~~---~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~  409 (515)
                      .+   ......|.+-..+| ++++|+.+|.|++||--....-..+++-..+|..+..+.+|++|+..+ +..+.+-++.
T Consensus       424 ~kqy~~k~nFsc~aTT~sG-~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc-~tyLlLi~t~  500 (644)
T KOG2395|consen  424 SKQYSTKNNFSCFATTESG-YIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIKHVDVTADGKWILATC-KTYLLLIDTL  500 (644)
T ss_pred             ccccccccccceeeecCCc-eEEEeecCCcEEeehhhhhhhhhcccccCCceeeEEeeccCcEEEEec-ccEEEEEEEe
Confidence            21   12456677776665 699999999999999833333445678889999999999999887654 4566666654

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=97.30  E-value=0.21  Score=50.42  Aligned_cols=230  Identities=13%  Similarity=0.100  Sum_probs=121.8

Q ss_pred             CcEEEEEecCCcEEEEeCCCCceeEEEEecCeE--------EEEEEEee----------------CCCEEEEEeCCCeEE
Q psy17610        136 FSSVFATCSKNDIRIWSVRTLNELLRISVMNMI--------CACIVFTY----------------DGKAILSGWNDGFIR  191 (515)
Q Consensus       136 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~--------v~~~~~~~----------------~~~~l~~~~~dg~i~  191 (515)
                      +..++.++.++.|.-.|..+|+.+.++......        +..+++..                .+..++.++.|+.+.
T Consensus       194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~Li  273 (764)
T TIGR03074       194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLI  273 (764)
T ss_pred             CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEE
Confidence            457888888899999999999998887643211        22233321                234788899999999


Q ss_pred             EEecCCCceEEEecCCCCCCeE-------------EEEEcC--CCCEEEEecC----------CCcEEEEEccCCceeeE
Q psy17610        192 CFTPQSGKLKFIIPNAHNRGVT-------------ALAITQ--DGTRLLSGGG----------EGQVRIWKLTRESQSLQ  246 (515)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~v~-------------~~~~~~--~~~~l~~~~~----------d~~i~iw~~~~~~~~~~  246 (515)
                      -.|.++|+....+.  ..+.+.             .+.-.|  .+..+++|+.          +|.|+-+|..+++....
T Consensus       274 ALDA~TGk~~W~fg--~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W~  351 (764)
T TIGR03074       274 ALDADTGKLCEDFG--NNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVWA  351 (764)
T ss_pred             EEECCCCCEEEEec--CCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCcEeeE
Confidence            99999999887652  111110             111122  2345666642          58899999965543333


Q ss_pred             EeeccccCceEEEEEecCCCEEEEEeCCC-cEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCC
Q psy17610        247 CVLKEHTSSVSVIQIKSDSKEAMSASTDG-TCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCD  325 (515)
Q Consensus       247 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~  325 (515)
                      .... .... ...  .+.++....++.+. ....+|.+.+....-...+.+    .+....+........+.|.-.|.++
T Consensus       352 ~~~g-~p~~-~~~--~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~p----d~~g~~r~~~~n~y~~slvALD~~T  423 (764)
T TIGR03074       352 WDPG-NPDP-TAP--PAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTP----DQWGGDRTPADEKYSSSLVALDATT  423 (764)
T ss_pred             EecC-CCCc-ccC--CCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccc----cccCCccccCcccccceEEEEeCCC
Confidence            2211 1000 000  01222222111111 222333333322111111110    0000001011112356777888999


Q ss_pred             CceEEEEecCC-C-------ccEEEEEEcC-CCC---EEEEEcCCCeEEEEEccCCeeeeec
Q psy17610        326 GSIIRSLEGSD-V-------AAVNCVDFVD-DGK---YFLTGGADQIVKMWMYREGVPCFVG  375 (515)
Q Consensus       326 ~~~~~~~~~~~-~-------~~i~~~~~~~-~~~---~l~~~~~dg~i~i~d~~~~~~~~~~  375 (515)
                      ++....++..+ .       ....-+.+.. +|+   .++.++.+|.+.++|.++|+++...
T Consensus       424 Gk~~W~~Q~~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~~~  485 (764)
T TIGR03074       424 GKERWVFQTVHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIVPV  485 (764)
T ss_pred             CceEEEecccCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEeec
Confidence            98887776522 0       1112223332 553   7899999999999999999877643

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=97.27  E-value=0.047  Score=47.24  Aligned_cols=146  Identities=12%  Similarity=0.094  Sum_probs=92.9

Q ss_pred             ceEEEEEecCCCEEEEEe---CCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEe-CCCCce-E
Q psy17610        255 SVSVIQIKSDSKEAMSAS---TDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWE-TCDGSI-I  329 (515)
Q Consensus       255 ~v~~~~~~~~~~~l~~~~---~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d-~~~~~~-~  329 (515)
                      .+...+++++++.++...   ....+.++.  .+...........+....|++++...++...+...+++. ...++. .
T Consensus        25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~--~~~~~~~~~~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~~  102 (253)
T PF10647_consen   25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGP--AGGPVRPVLTGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGEP  102 (253)
T ss_pred             cccceEECCCCCeEEEEEEcCCCCEEEEEc--CCCcceeeccCCccccccccCCCCEEEEEcCCCceEEEEecCCCccee
Confidence            678899999999887766   223445544  343333333444778889999988877777666666663 333332 2


Q ss_pred             EEEecCCCc-cEEEEEEcCCCCEEEEEc---CCCeEEEEEcc---CC------eeeeeccCCCCCeeEEEECCCCcEEEE
Q psy17610        330 RSLEGSDVA-AVNCVDFVDDGKYFLTGG---ADQIVKMWMYR---EG------VPCFVGIGHAASITKIKISPDKKVIVS  396 (515)
Q Consensus       330 ~~~~~~~~~-~i~~~~~~~~~~~l~~~~---~dg~i~i~d~~---~~------~~~~~~~~~~~~i~~~~~~~~~~~l~~  396 (515)
                      ......... .|..+.+||||..++...   .++.|.+--+.   .+      .+..........++.++|.+++.+++.
T Consensus       103 ~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~V~  182 (253)
T PF10647_consen  103 VEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLVVL  182 (253)
T ss_pred             EEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCCEEEEE
Confidence            223322222 899999999999888765   34677776543   22      112222234568899999999987777


Q ss_pred             EeCCCc
Q psy17610        397 VSADGG  402 (515)
Q Consensus       397 ~~~dg~  402 (515)
                      +...+.
T Consensus       183 ~~~~~~  188 (253)
T PF10647_consen  183 GRSAGG  188 (253)
T ss_pred             eCCCCC
Confidence            765443

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=97.26  E-value=0.17  Score=47.51  Aligned_cols=149  Identities=13%  Similarity=0.113  Sum_probs=90.4

Q ss_pred             CcEEEEEEecCCCEEE-EEe--cCceEEEEECCCCceeEEeeccCccCeEEEEeCCC----CcEEEEEecCCcEEEEeCC
Q psy17610         82 SGISSLQYNPVNNKVF-VGT--VNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVN----FSSVFATCSKNDIRIWSVR  154 (515)
Q Consensus        82 ~~v~~~~~s~~~~~l~-~~~--~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~----~~~l~~~~~d~~i~iw~~~  154 (515)
                      .+|..++|. ||+.++ +.-  .+|.++.=|..        .-|..+-|..+.|.|-    ...|++..-.+.|.||.+.
T Consensus        20 HPvhGlaWT-DGkqVvLT~L~l~~gE~kfGds~--------viGqFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~   90 (671)
T PF15390_consen   20 HPVHGLAWT-DGKQVVLTDLQLHNGEPKFGDSK--------VIGQFEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLC   90 (671)
T ss_pred             ccccceEec-CCCEEEEEeeeeeCCccccCCcc--------EeeccceeeeeeecCcccCCCCceEEEeccceEEEEEec
Confidence            467888998 555544 321  23333321111        1124456899999885    4578888889999999876


Q ss_pred             -----CCceeEEEEe-c--CeE--EEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEE
Q psy17610        155 -----TLNELLRISV-M--NMI--CACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRL  224 (515)
Q Consensus       155 -----~~~~~~~~~~-~--~~~--v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  224 (515)
                           +++.+..... .  ..+  -..+.|+|....|++-.....-.++++......-...-...+-|.|.+|.+||++|
T Consensus        91 ~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~sV~~d~srVkaDi~~~G~IhCACWT~DG~RL  170 (671)
T PF15390_consen   91 PSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSVLPSVHCDSSRVKADIKTSGLIHCACWTKDGQRL  170 (671)
T ss_pred             cCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeEeeeeeeCCceEEEeccCCceEEEEEecCcCCEE
Confidence                 2222222111 1  111  14577999998888776655445566554333222223567889999999999988


Q ss_pred             EEecC-CCcEEEEEcc
Q psy17610        225 LSGGG-EGQVRIWKLT  239 (515)
Q Consensus       225 ~~~~~-d~~i~iw~~~  239 (515)
                      +++-. .=.-++||-.
T Consensus       171 VVAvGSsLHSyiWd~~  186 (671)
T PF15390_consen  171 VVAVGSSLHSYIWDSA  186 (671)
T ss_pred             EEEeCCeEEEEEecCc
Confidence            76533 3346778754

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=97.26  E-value=0.097  Score=44.48  Aligned_cols=198  Identities=6%  Similarity=-0.022  Sum_probs=118.0

Q ss_pred             eEEEEEEcCc--cEEEEEEcCCCcEEEEEECCC--eEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeE
Q psy17610        286 TRLIIMILPS--MIMSAAYHPSEVQLITCSTNK--MIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIV  361 (515)
Q Consensus       286 ~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~--~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i  361 (515)
                      +.+..+.++.  -...+.+..++..+-+.+.-|  .|+.+|+.+++.......+...--..++... +++....-.++..
T Consensus        34 ~vv~~ypHd~~aFTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~~-d~l~qLTWk~~~~  112 (264)
T PF05096_consen   34 EVVETYPHDPTAFTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITILG-DKLYQLTWKEGTG  112 (264)
T ss_dssp             EEEEEEE--TT-EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEET-TEEEEEESSSSEE
T ss_pred             EEEEECCCCCcccCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEEC-CEEEEEEecCCeE
Confidence            3455555544  356677777787777777655  6999999999988887766534444555553 3555566778999


Q ss_pred             EEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCc
Q psy17610        362 KMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILP  441 (515)
Q Consensus       362 ~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  441 (515)
                      .+||..+.+.+.++.- ...=..++  .|++.|+..+....+.++|..+.+...    .+.....    .       ..-
T Consensus       113 f~yd~~tl~~~~~~~y-~~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~----~i~V~~~----g-------~pv  174 (264)
T PF05096_consen  113 FVYDPNTLKKIGTFPY-PGEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVR----TIQVTDN----G-------RPV  174 (264)
T ss_dssp             EEEETTTTEEEEEEE--SSS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEE----EEE-EET----T-------EE-
T ss_pred             EEEccccceEEEEEec-CCcceEEE--cCCCEEEEECCccceEEECCcccceEE----EEEEEEC----C-------EEC
Confidence            9999999888877643 34446666  467778877777789999876543211    0000000    0       001


Q ss_pred             ccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecc------------c--ccceEEEEEEcCCCcEEEEee
Q psy17610        442 SMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEG------------S--DVAAVNCVDFVDDGKYFLTGG  503 (515)
Q Consensus       442 ~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~------------~--~~~~v~~~~~s~~~~~l~s~~  503 (515)
                      ..++.+.+- +|...|-.-....|..-|..+|+.+..+.-            .  .....+.||+.|..+.|...|
T Consensus       175 ~~LNELE~i-~G~IyANVW~td~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTG  249 (264)
T PF05096_consen  175 SNLNELEYI-NGKIYANVWQTDRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTG  249 (264)
T ss_dssp             --EEEEEEE-TTEEEEEETTSSEEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEE
T ss_pred             CCcEeEEEE-cCEEEEEeCCCCeEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEe
Confidence            235566665 566666555566677888888887765421            0  125689999988766555444

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>COG3292 Predicted periplasmic ligand-binding sensor domain [Signal transduction mechanisms]

Probab=97.22  E-value=0.19  Score=47.05  Aligned_cols=271  Identities=13%  Similarity=0.098  Sum_probs=142.5

Q ss_pred             CccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecC-eEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceE
Q psy17610        123 HTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMN-MICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLK  201 (515)
Q Consensus       123 h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~  201 (515)
                      -..+|..+.+...| .+.+++.|| +..+|..+++.++.-.... .+|..+.-+-.|+ +.+|+.+| +.+.+.+..+..
T Consensus       163 ~d~~V~aLv~D~~g-~lWvgT~dG-L~~fd~~~gkalql~s~~~dk~I~al~~d~qg~-LWVGTdqG-v~~~e~~G~~~s  238 (671)
T COG3292         163 KDTPVVALVFDANG-RLWVGTPDG-LSYFDAGRGKALQLASPPLDKAINALIADVQGR-LWVGTDQG-VYLQEAEGWRAS  238 (671)
T ss_pred             cCccceeeeeeccC-cEEEecCCc-ceEEccccceEEEcCCCcchhhHHHHHHHhcCc-EEEEeccc-eEEEchhhcccc
Confidence            34578888888886 666666666 5667777777665544333 4555555555554 77888777 788877764443


Q ss_pred             EEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEe-ecc--ccCceEEEEEecCCCEEEEEeCCCcEE
Q psy17610        202 FIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCV-LKE--HTSSVSVIQIKSDSKEAMSASTDGTCV  278 (515)
Q Consensus       202 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~-~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~  278 (515)
                      .....-....|..+.-..+|. +-.|+.+|..+. ...  ....... .+.  .-+.|..+..+.+|. +.+++.++.++
T Consensus       239 n~~~~lp~~~I~ll~qD~qG~-lWiGTenGl~r~-~l~--rq~Lq~~~~~~~l~~S~vnsL~~D~dGs-LWv~t~~giv~  313 (671)
T COG3292         239 NWGPMLPSGNILLLVQDAQGE-LWIGTENGLWRT-RLP--RQGLQIPLSKMHLGVSTVNSLWLDTDGS-LWVGTYGGIVR  313 (671)
T ss_pred             ccCCCCcchheeeeecccCCC-EEEeecccceeE-ecC--CCCccccccccCCccccccceeeccCCC-EeeeccCceEE
Confidence            333223344555555555554 555776664433 222  2211111 111  123455565555654 56666666555


Q ss_pred             EEEcccceEEEEEE-cCcc-EEEEEEcC--CCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEE
Q psy17610        279 LWDLIKSTRLIIMI-LPSM-IMSAAYHP--SEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLT  354 (515)
Q Consensus       279 iwd~~~~~~~~~~~-~~~~-~~~~~~~~--~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~  354 (515)
                      +-+-. ......+. .++. +...+..|  .+..+-.....|.+.+-+-.++..+.....-....|+...+..+|. +-.
T Consensus       314 ~~~a~-w~~ma~in~~dG~v~~~~~~a~~ll~~~v~~~ns~g~L~van~stG~~v~sv~q~Rg~nit~~~~d~~g~-lWl  391 (671)
T COG3292         314 YLTAD-WKRMAVINDSDGGVSQYEAVAPALLSWGVRQLNSIGELMVANGSTGELVRSVHQLRGMNITTTLEDSRGR-LWL  391 (671)
T ss_pred             Eecch-hhheeeeecCCCchhhhhccCchhcccceeeccccceEEEecCCCCcEEEEeeeccccccchhhhccCCc-EEE
Confidence            44322 11111111 1111 11111111  1222222223344555566667666665544445677777777554 555


Q ss_pred             EcCCCeEEEEEccC-Ceeeeecc-CCCCCeeEEEECCCCcEEEEEeCCCcEEE
Q psy17610        355 GGADQIVKMWMYRE-GVPCFVGI-GHAASITKIKISPDKKVIVSVSADGGIFL  405 (515)
Q Consensus       355 ~~~dg~i~i~d~~~-~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~i~i  405 (515)
                      |+...-+..|+.++ +....... ...++|..+-=.|+++ |..++.+|.++.
T Consensus       392 gs~q~GLsrl~n~n~~avlde~agl~ss~V~aived~dns-LWIGTs~Glvk~  443 (671)
T COG3292         392 GSMQNGLSRLDNKNEWAVLDEDAGLPSSEVSAIVEDPDNS-LWIGTSGGLVKR  443 (671)
T ss_pred             EecccchhhhccCCcccccccccCCcccceeeeeecCCCC-EEEeccCCeEec
Confidence            55553455566555 32222222 2346788888888888 777888876543

>KOG2280|consensus

Probab=97.13  E-value=0.062  Score=51.74  Aligned_cols=198  Identities=11%  Similarity=0.072  Sum_probs=104.9

Q ss_pred             CCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEE--EecCCCCCCeEEEEEcCCCC
Q psy17610        145 KNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKF--IIPNAHNRGVTALAITQDGT  222 (515)
Q Consensus       145 d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~  222 (515)
                      .-.|+|+++ +|..+.++.-....+-.+.|+.+.. |++...+|.+++|++-......  .........|..+.+..+|-
T Consensus        63 ~~~I~If~~-sG~lL~~~~w~~~~lI~mgWs~~ee-LI~v~k~g~v~Vy~~~ge~ie~~svg~e~~~~~I~ec~~f~~GV  140 (829)
T KOG2280|consen   63 RPYIRIFNI-SGQLLGRILWKHGELIGMGWSDDEE-LICVQKDGTVHVYGLLGEFIESNSVGFESQMSDIVECRFFHNGV  140 (829)
T ss_pred             ceeEEEEec-cccchHHHHhcCCCeeeecccCCce-EEEEeccceEEEeecchhhhcccccccccccCceeEEEEecCce
Confidence            345888886 4666666554455778899987664 7777899999999986543322  11122334455555555664


Q ss_pred             EEEEecCCCcEEEEEccCCceeeEEeec---cccCceEEEEEecCCC---EEEEEe-CCCcEEEEEcc--cceEEEEEEc
Q psy17610        223 RLLSGGGEGQVRIWKLTRESQSLQCVLK---EHTSSVSVIQIKSDSK---EAMSAS-TDGTCVLWDLI--KSTRLIIMIL  293 (515)
Q Consensus       223 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~---~l~~~~-~d~~i~iwd~~--~~~~~~~~~~  293 (515)
                      .+++  .+|.+.+-+-  ........++   ....+-.+-...+++.   .++-.. ..+ ..+....  ..+.......
T Consensus       141 avlt--~~g~v~~i~~--~~~~~~~~~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~~v~-~~~~q~~~~~~q~~~~~~~  215 (829)
T KOG2280|consen  141 AVLT--VSGQVILING--VEEPKLRKMPDIPYNELPKSCWTVFQPHRQSTILLDVDVAVG-LHICQVEESRVQLHALSWP  215 (829)
T ss_pred             EEEe--cCCcEEEEcC--CCcchhhhCCCCCCccCCCcceeEecCCCcceeEEeechhhh-hcccceecccccccccCCC
Confidence            4443  3344444321  1111111111   1111111111112211   111111 000 0111111  1111111122


Q ss_pred             CccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCC
Q psy17610        294 PSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDG  349 (515)
Q Consensus       294 ~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~  349 (515)
                      .+.+..+..+|+.++++.-...|.|.+-+....+....+......+...++|.-+.
T Consensus       216 ~~~~~ki~VS~n~~~laLyt~~G~i~~vs~D~~~~lce~~~~~~~~p~qm~Wcgnd  271 (829)
T KOG2280|consen  216 NSSVVKISVSPNRRFLALYTETGKIWVVSIDLSQILCEFNCTDHDPPKQMAWCGND  271 (829)
T ss_pred             CceEEEEEEcCCcceEEEEecCCcEEEEecchhhhhhccCCCCCCchHhceeecCC
Confidence            36788899999999999999999999998888887777775443444466665443

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=97.09  E-value=0.21  Score=45.30  Aligned_cols=231  Identities=18%  Similarity=0.177  Sum_probs=117.4

Q ss_pred             EEEEEEeeCCCEEEEEeCCCeEEEEecCCCce---EEEe---cCCCCCCeEEEEEcCC---CCEEEEecC-C--------
Q psy17610        169 CACIVFTYDGKAILSGWNDGFIRCFTPQSGKL---KFII---PNAHNRGVTALAITQD---GTRLLSGGG-E--------  230 (515)
Q Consensus       169 v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~---~~~~---~~~~~~~v~~~~~~~~---~~~l~~~~~-d--------  230 (515)
                      .+.|+|.|||+.++ +...|.|++++ ..+..   +..+   ..........++++|+   ..+|.+... .        
T Consensus         4 P~~~a~~pdG~l~v-~e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~~~   81 (331)
T PF07995_consen    4 PRSMAFLPDGRLLV-AERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGDND   81 (331)
T ss_dssp             EEEEEEETTSCEEE-EETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSSEE
T ss_pred             ceEEEEeCCCcEEE-EeCCceEEEEe-CCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCCcc
Confidence            46899999987655 56799999999 44433   2222   1234567899999994   233433322 1        


Q ss_pred             CcEEEEEccCC------ceeeEEeecc---ccCceEEEEEecCCCEEEEEeCCCc-------------EEEEEcccceE-
Q psy17610        231 GQVRIWKLTRE------SQSLQCVLKE---HTSSVSVIQIKSDSKEAMSASTDGT-------------CVLWDLIKSTR-  287 (515)
Q Consensus       231 ~~i~iw~~~~~------~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~~-------------i~iwd~~~~~~-  287 (515)
                      ..|.-|.....      ..........   ....-..|.|.|||.+.++.+..+.             |.-.+.. ++. 
T Consensus        82 ~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~~~~~~~~~~~~~~G~ilri~~d-G~~p  160 (331)
T PF07995_consen   82 NRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDGGNDDNAQDPNSLRGKILRIDPD-GSIP  160 (331)
T ss_dssp             EEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-TTTGGGGCSTTSSTTEEEEEETT-SSB-
T ss_pred             eeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCCCCcccccccccccceEEEeccc-CcCC
Confidence            23444444322      1111112222   2234467999999977777665432             2222211 100 


Q ss_pred             ------------EEEE-EcCccEEEEEEcCC-CcEEEEEE-CCC--eEEEEeC--------CC------C----------
Q psy17610        288 ------------LIIM-ILPSMIMSAAYHPS-EVQLITCS-TNK--MIDYWET--------CD------G----------  326 (515)
Q Consensus       288 ------------~~~~-~~~~~~~~~~~~~~-~~~l~~~~-~~~--~i~~~d~--------~~------~----------  326 (515)
                                  ...+ ..-.....++|+|. +.++++=. .+.  .|.+...        ..      +          
T Consensus       161 ~dnP~~~~~~~~~~i~A~GlRN~~~~~~d~~tg~l~~~d~G~~~~dein~i~~G~nYGWP~~~~~~~~~~~~~~~~~~~~  240 (331)
T PF07995_consen  161 ADNPFVGDDGADSEIYAYGLRNPFGLAFDPNTGRLWAADNGPDGWDEINRIEPGGNYGWPYCEGGPKYSGPPIGDAPSCP  240 (331)
T ss_dssp             TTSTTTTSTTSTTTEEEE--SEEEEEEEETTTTEEEEEEE-SSSSEEEEEE-TT-B--TTTBSSSCSTTSS-ECTGSS-T
T ss_pred             CCCccccCCCceEEEEEeCCCccccEEEECCCCcEEEEccCCCCCcEEEEeccCCcCCCCCCcCCCCCCCCccccccCCC
Confidence                        0000 01113578899998 55554321 121  2322110        00      0          


Q ss_pred             ---ceEEEEecCCCccEEEEEEcC-------CCCEEEEEcCCCeEEEEEccCCeeee----eccCCCCCeeEEEECCCCc
Q psy17610        327 ---SIIRSLEGSDVAAVNCVDFVD-------DGKYFLTGGADQIVKMWMYREGVPCF----VGIGHAASITKIKISPDKK  392 (515)
Q Consensus       327 ---~~~~~~~~~~~~~i~~~~~~~-------~~~~l~~~~~dg~i~i~d~~~~~~~~----~~~~~~~~i~~~~~~~~~~  392 (515)
                         .+...+. ++ ..+..+.|-.       .|.++++.-..+.|....++.+..+.    .+......+..+++.|||.
T Consensus       241 ~~~~P~~~~~-~~-~ap~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~pDG~  318 (331)
T PF07995_consen  241 GFVPPVFAYP-PH-SAPTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQGPDGA  318 (331)
T ss_dssp             TS---SEEET-TT---EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEETTSE
T ss_pred             CcCccceeec-Cc-cccCceEEECCccCccccCcEEEecCCCCEEEEEeeecCCCccceEEccccCCCCceEEEEcCCCe
Confidence               1122222 22 4556666653       45667776667788888887553221    2234555899999999999


Q ss_pred             EEEEEeCCCcEE
Q psy17610        393 VIVSVSADGGIF  404 (515)
Q Consensus       393 ~l~~~~~dg~i~  404 (515)
                      +.++.+.+|.|.
T Consensus       319 Lyv~~d~~G~iy  330 (331)
T PF07995_consen  319 LYVSDDSDGKIY  330 (331)
T ss_dssp             EEEEE-TTTTEE
T ss_pred             EEEEECCCCeEe
Confidence            998888888764

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>COG3292 Predicted periplasmic ligand-binding sensor domain [Signal transduction mechanisms]

Probab=97.03  E-value=0.29  Score=45.87  Aligned_cols=317  Identities=15%  Similarity=0.148  Sum_probs=160.2

Q ss_pred             cCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCce
Q psy17610         79 KDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNE  158 (515)
Q Consensus        79 ~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~  158 (515)
                      .-..+|.++.++.+|. +.+|+.|| +..||..+++.+.........+|..+.-+-.| .|.+++.+| +.+.+.+..+.
T Consensus       162 l~d~~V~aLv~D~~g~-lWvgT~dG-L~~fd~~~gkalql~s~~~dk~I~al~~d~qg-~LWVGTdqG-v~~~e~~G~~~  237 (671)
T COG3292         162 LKDTPVVALVFDANGR-LWVGTPDG-LSYFDAGRGKALQLASPPLDKAINALIADVQG-RLWVGTDQG-VYLQEAEGWRA  237 (671)
T ss_pred             ccCccceeeeeeccCc-EEEecCCc-ceEEccccceEEEcCCCcchhhHHHHHHHhcC-cEEEEeccc-eEEEchhhccc
Confidence            3457888999998775 67788886 77888888766665554444678777777665 556665554 66665544111


Q ss_pred             eEEE-EecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCC--CCCeEEEEEcCCCCEEEEecCCCcEEE
Q psy17610        159 LLRI-SVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAH--NRGVTALAITQDGTRLLSGGGEGQVRI  235 (515)
Q Consensus       159 ~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~~i~i  235 (515)
                      .... ......|..+.=..+| .+-.|+..|..+. ..............|  ...|.++....+|. +-+++.++.+++
T Consensus       238 sn~~~~lp~~~I~ll~qD~qG-~lWiGTenGl~r~-~l~rq~Lq~~~~~~~l~~S~vnsL~~D~dGs-LWv~t~~giv~~  314 (671)
T COG3292         238 SNWGPMLPSGNILLLVQDAQG-ELWIGTENGLWRT-RLPRQGLQIPLSKMHLGVSTVNSLWLDTDGS-LWVGTYGGIVRY  314 (671)
T ss_pred             cccCCCCcchheeeeecccCC-CEEEeecccceeE-ecCCCCccccccccCCccccccceeeccCCC-EeeeccCceEEE
Confidence            1100 0122233333322233 4556666664433 223222222221222  23456666666775 555666665554


Q ss_pred             EEccCCceeeEEeeccccCc-eEEEEEec--CCCEEEEEeCCCcEEEEEcccceEEEEEE-c-CccEEEEEEcCCCcEEE
Q psy17610        236 WKLTRESQSLQCVLKEHTSS-VSVIQIKS--DSKEAMSASTDGTCVLWDLIKSTRLIIMI-L-PSMIMSAAYHPSEVQLI  310 (515)
Q Consensus       236 w~~~~~~~~~~~~~~~~~~~-v~~~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~-~~~~~~~~~~~~~~~l~  310 (515)
                      -+-   .......+....+. +...+..|  .+..+.-....|.+.+-+-.++....... . +..++..++..++. +-
T Consensus       315 ~~a---~w~~ma~in~~dG~v~~~~~~a~~ll~~~v~~~ns~g~L~van~stG~~v~sv~q~Rg~nit~~~~d~~g~-lW  390 (671)
T COG3292         315 LTA---DWKRMAVINDSDGGVSQYEAVAPALLSWGVRQLNSIGELMVANGSTGELVRSVHQLRGMNITTTLEDSRGR-LW  390 (671)
T ss_pred             ecc---hhhheeeeecCCCchhhhhccCchhcccceeeccccceEEEecCCCCcEEEEeeeccccccchhhhccCCc-EE
Confidence            432   11111111111111 11111111  11111111111223333333333333221 1 13455555666444 44


Q ss_pred             EEECCCeEEEEeCCC-CceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeec--cC---CCCCeeE
Q psy17610        311 TCSTNKMIDYWETCD-GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVG--IG---HAASITK  384 (515)
Q Consensus       311 ~~~~~~~i~~~d~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~--~~---~~~~i~~  384 (515)
                      .++...-+..|+.++ +.......+...+++..+.-.|+++ |..|+.+|.++. +.+.++....+  ..   ..+.+..
T Consensus       391 lgs~q~GLsrl~n~n~~avlde~agl~ss~V~aived~dns-LWIGTs~Glvk~-~pe~~~v~n~ln~~~~~l~~s~~~~  468 (671)
T COG3292         391 LGSMQNGLSRLDNKNEWAVLDEDAGLPSSEVSAIVEDPDNS-LWIGTSGGLVKR-DPESGRVLNLLNPGSHGLDGSRVEQ  468 (671)
T ss_pred             EEecccchhhhccCCcccccccccCCcccceeeeeecCCCC-EEEeccCCeEec-CccccchhcccccccCcCCcchhhh
Confidence            455554455666666 5555555566667888888889888 888998887664 33333222221  11   2345777


Q ss_pred             EEECCCCcEEEEEeCCCcEEEEeCCC
Q psy17610        385 IKISPDKKVIVSVSADGGIFLWTFPE  410 (515)
Q Consensus       385 ~~~~~~~~~l~~~~~dg~i~iw~~~~  410 (515)
                      +.+.|++++-+.. .+| |..|+-+.
T Consensus       469 lg~~~~g~Lw~a~-g~g-va~~~sq~  492 (671)
T COG3292         469 LGLGPDGRLWLAA-GSG-VAAWESQR  492 (671)
T ss_pred             hccCCCCceEEEe-cce-eeeecccc
Confidence            8899999855433 333 57776544

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=97.03  E-value=0.21  Score=44.08  Aligned_cols=273  Identities=15%  Similarity=0.138  Sum_probs=130.5

Q ss_pred             cCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccC----ccCeEEEEeCCCCcEEEEEecCCcEEEEeCC
Q psy17610         79 KDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCH----TSAIYDLQFPVNFSSVFATCSKNDIRIWSVR  154 (515)
Q Consensus        79 ~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~  154 (515)
                      +-...+..|+|..+..-+|+|. .+.| +-..+.|+.-......-    .-...++.|..+  ...+++..+ +.+...+
T Consensus        14 ~t~~~l~dV~F~d~~~G~~VG~-~g~i-l~T~DGG~tW~~~~~~~~~~~~~~l~~I~f~~~--~g~ivG~~g-~ll~T~D   88 (302)
T PF14870_consen   14 PTDKPLLDVAFVDPNHGWAVGA-YGTI-LKTTDGGKTWQPVSLDLDNPFDYHLNSISFDGN--EGWIVGEPG-LLLHTTD   88 (302)
T ss_dssp             S-SS-EEEEEESSSS-EEEEET-TTEE-EEESSTTSS-EE-----S-----EEEEEEEETT--EEEEEEETT-EEEEESS
T ss_pred             CCCCceEEEEEecCCEEEEEec-CCEE-EEECCCCccccccccCCCccceeeEEEEEecCC--ceEEEcCCc-eEEEecC
Confidence            4567899999996566666664 4433 33333343322221111    123567777644  344445444 4444545


Q ss_pred             CCceeEEEEe---cCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCC
Q psy17610        155 TLNELLRISV---MNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEG  231 (515)
Q Consensus       155 ~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~  231 (515)
                      .|+.=.++..   -......+....++. ...++..|.|..= .+.|+.-..+.......+..+..+++|++++++..-.
T Consensus        89 gG~tW~~v~l~~~lpgs~~~i~~l~~~~-~~l~~~~G~iy~T-~DgG~tW~~~~~~~~gs~~~~~r~~dG~~vavs~~G~  166 (302)
T PF14870_consen   89 GGKTWERVPLSSKLPGSPFGITALGDGS-AELAGDRGAIYRT-TDGGKTWQAVVSETSGSINDITRSSDGRYVAVSSRGN  166 (302)
T ss_dssp             TTSS-EE----TT-SS-EEEEEEEETTE-EEEEETT--EEEE-SSTTSSEEEEE-S----EEEEEE-TTS-EEEEETTSS
T ss_pred             CCCCcEEeecCCCCCCCeeEEEEcCCCc-EEEEcCCCcEEEe-CCCCCCeeEcccCCcceeEeEEECCCCcEEEEECccc
Confidence            5554333321   112223344444443 3434455554332 2344433333355667789999999999999887766


Q ss_pred             cEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEE-cccceEEEEEEcC-----ccEEEEEEcCC
Q psy17610        232 QVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWD-LIKSTRLIIMILP-----SMIMSAAYHPS  305 (515)
Q Consensus       232 ~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd-~~~~~~~~~~~~~-----~~~~~~~~~~~  305 (515)
                      ...-||.-.....+.  -..-...|..+.|.|++...+.+ ..|.|+.=+ ....+.-.....+     ..+..+++.++
T Consensus       167 ~~~s~~~G~~~w~~~--~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~~~~~w~~~~~~~~~~~~~~ld~a~~~~  243 (302)
T PF14870_consen  167 FYSSWDPGQTTWQPH--NRNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPDDGETWSEPIIPIKTNGYGILDLAYRPP  243 (302)
T ss_dssp             EEEEE-TT-SS-EEE--E--SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TTEEEEE---B-TTSS--S-EEEEEESSS
T ss_pred             EEEEecCCCccceEE--ccCccceehhceecCCCCEEEEe-CCcEEEEccCCCCccccccccCCcccCceeeEEEEecCC
Confidence            667788632222222  23356789999999997765544 788888877 2222222221111     24789999998


Q ss_pred             CcEEEEEECCCeEEEEeCCCCceEEEEec--CCCccEEEEEEcCCCCEEEEEcCCCeEEEE
Q psy17610        306 EVQLITCSTNKMIDYWETCDGSIIRSLEG--SDVAAVNCVDFVDDGKYFLTGGADQIVKMW  364 (515)
Q Consensus       306 ~~~l~~~~~~~~i~~~d~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~  364 (515)
                      +...++++.. .+ +.....|+.=++.+.  .-...+..+.|.++.+-++.| .+|.+.-|
T Consensus       244 ~~~wa~gg~G-~l-~~S~DgGktW~~~~~~~~~~~n~~~i~f~~~~~gf~lG-~~G~ll~~  301 (302)
T PF14870_consen  244 NEIWAVGGSG-TL-LVSTDGGKTWQKDRVGENVPSNLYRIVFVNPDKGFVLG-QDGVLLRY  301 (302)
T ss_dssp             S-EEEEESTT--E-EEESSTTSS-EE-GGGTTSSS---EEEEEETTEEEEE--STTEEEEE
T ss_pred             CCEEEEeCCc-cE-EEeCCCCccceECccccCCCCceEEEEEcCCCceEEEC-CCcEEEEe
Confidence            8777766544 33 334445555444433  223567888888765655555 57776544

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=96.99  E-value=0.5  Score=47.86  Aligned_cols=230  Identities=11%  Similarity=0.074  Sum_probs=121.4

Q ss_pred             CCCEEEEEecCceEEEEECCCCceeEEeeccCcc-------CeEEEEeC----------------CCCcEEEEEecCCcE
Q psy17610         92 VNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTS-------AIYDLQFP----------------VNFSSVFATCSKNDI  148 (515)
Q Consensus        92 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~-------~v~~~~~~----------------~~~~~l~~~~~d~~i  148 (515)
                      .+..|++++.++.|+-.|..+|+.+-+.......       ....+++.                ..+..++.++.|+.+
T Consensus       193 vgg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~L  272 (764)
T TIGR03074       193 VGDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARL  272 (764)
T ss_pred             ECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeE
Confidence            3667888888889999999998776554321110       01122221                123488888899999


Q ss_pred             EEEeCCCCceeEEEEecCeEEE-------------EEEEee--CCCEEEEEeC----------CCeEEEEecCCCceEEE
Q psy17610        149 RIWSVRTLNELLRISVMNMICA-------------CIVFTY--DGKAILSGWN----------DGFIRCFTPQSGKLKFI  203 (515)
Q Consensus       149 ~iw~~~~~~~~~~~~~~~~~v~-------------~~~~~~--~~~~l~~~~~----------dg~i~~~~~~~~~~~~~  203 (515)
                      .-.|.++|+.+..+... +.+.             .+.-.|  .+..+++++.          +|.|+-+|.++|+.+..
T Consensus       273 iALDA~TGk~~W~fg~~-G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W~  351 (764)
T TIGR03074       273 IALDADTGKLCEDFGNN-GTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVWA  351 (764)
T ss_pred             EEEECCCCCEEEEecCC-CceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCcEeeE
Confidence            99999999988776421 1110             001111  1345666642          68899999999999887


Q ss_pred             ecCCCCCCeEEEEEcCCCCEEEEecCCC-cEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEc
Q psy17610        204 IPNAHNRGVTALAITQDGTRLLSGGGEG-QVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDL  282 (515)
Q Consensus       204 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~  282 (515)
                      +....... ...  .+.+.....++.+. ...-+|.+.  . .+..-.+...+    .+....+........+.|.-.|.
T Consensus       352 ~~~g~p~~-~~~--~~~g~~~~~gg~n~W~~~s~D~~~--g-lvy~ptGn~~p----d~~g~~r~~~~n~y~~slvALD~  421 (764)
T TIGR03074       352 WDPGNPDP-TAP--PAPGETYTRNTPNSWSVASYDEKL--G-LVYLPMGNQTP----DQWGGDRTPADEKYSSSLVALDA  421 (764)
T ss_pred             EecCCCCc-ccC--CCCCCEeccCCCCccCceEEcCCC--C-eEEEeCCCccc----cccCCccccCcccccceEEEEeC
Confidence            74332111 100  11233222222211 222233211  1 11111111110    00000000001112456777777


Q ss_pred             ccceEEEEEEc-C---------ccEEEEEEcC-CCc---EEEEEECCCeEEEEeCCCCceEEEE
Q psy17610        283 IKSTRLIIMIL-P---------SMIMSAAYHP-SEV---QLITCSTNKMIDYWETCDGSIIRSL  332 (515)
Q Consensus       283 ~~~~~~~~~~~-~---------~~~~~~~~~~-~~~---~l~~~~~~~~i~~~d~~~~~~~~~~  332 (515)
                      ++++..-.++. +         .+..-+.+.. +++   .++.+..+|.++++|.++++.+...
T Consensus       422 ~TGk~~W~~Q~~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~~~  485 (764)
T TIGR03074       422 TTGKERWVFQTVHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIVPV  485 (764)
T ss_pred             CCCceEEEecccCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEeec
Confidence            77777665543 1         1122222322 453   7888999999999999999887654

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>PRK10115 protease 2; Provisional

Probab=96.98  E-value=0.5  Score=47.67  Aligned_cols=239  Identities=7%  Similarity=-0.053  Sum_probs=120.5

Q ss_pred             cCeEEEEeCCCCcEEEEEec-C----CcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCC------CeEEEE
Q psy17610        125 SAIYDLQFPVNFSSVFATCS-K----NDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWND------GFIRCF  193 (515)
Q Consensus       125 ~~v~~~~~~~~~~~l~~~~~-d----~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------g~i~~~  193 (515)
                      -.+..+.++||+++|+.+.. +    ..+++-|+.+++.+...-... . ..++|++|++.|+....+      ..|..+
T Consensus       127 ~~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~-~-~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h  204 (686)
T PRK10115        127 YTLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNV-E-PSFVWANDSWTFYYVRKHPVTLLPYQVWRH  204 (686)
T ss_pred             EEEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCc-c-eEEEEeeCCCEEEEEEecCCCCCCCEEEEE
Confidence            34677889999998887765 2    248899998886432221111 1 458999999877765442      367888


Q ss_pred             ecCCC--ceEEEecCCCCCCeE-EEEEcCCCCEEEEec---CCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCE
Q psy17610        194 TPQSG--KLKFIIPNAHNRGVT-ALAITQDGTRLLSGG---GEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKE  267 (515)
Q Consensus       194 ~~~~~--~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~---~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  267 (515)
                      ++.++  +-...+ ........ ....+.++++++..+   .++.+.+++...........+.........+. +.. ..
T Consensus       205 ~lgt~~~~d~lv~-~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~  281 (686)
T PRK10115        205 TIGTPASQDELVY-EEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAELADAEPFVFLPRRKDHEYSLD-HYQ-HR  281 (686)
T ss_pred             ECCCChhHCeEEE-eeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECcCCCCCceEEEECCCCCEEEEE-eCC-CE
Confidence            88887  333333 22222233 333444777766443   34578888853222222222222222222222 222 33


Q ss_pred             EEEEeCC----CcEEEEEccc-ceEEEEEEc-C-ccEEEEEEcCCCcEEEEEECCCeE--EEEeCCCCceEEEEecCCCc
Q psy17610        268 AMSASTD----GTCVLWDLIK-STRLIIMIL-P-SMIMSAAYHPSEVQLITCSTNKMI--DYWETCDGSIIRSLEGSDVA  338 (515)
Q Consensus       268 l~~~~~d----~~i~iwd~~~-~~~~~~~~~-~-~~~~~~~~~~~~~~l~~~~~~~~i--~~~d~~~~~~~~~~~~~~~~  338 (515)
                      +...+..    ..|...++.. ++....+.. . ..+..+.+. .+..+++...++.-  .+++...+ .+..+......
T Consensus       282 ly~~tn~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~-~~~l~~~~~~~g~~~l~~~~~~~~-~~~~l~~~~~~  359 (686)
T PRK10115        282 FYLRSNRHGKNFGLYRTRVRDEQQWEELIPPRENIMLEGFTLF-TDWLVVEERQRGLTSLRQINRKTR-EVIGIAFDDPA  359 (686)
T ss_pred             EEEEEcCCCCCceEEEecCCCcccCeEEECCCCCCEEEEEEEE-CCEEEEEEEeCCEEEEEEEcCCCC-ceEEecCCCCc
Confidence            3333322    2344444442 222222223 1 256667776 33445555556654  44454333 34444321112


Q ss_pred             cEEEEEEc--CCCC-EEEEEc---CCCeEEEEEccCCe
Q psy17610        339 AVNCVDFV--DDGK-YFLTGG---ADQIVKMWMYREGV  370 (515)
Q Consensus       339 ~i~~~~~~--~~~~-~l~~~~---~dg~i~i~d~~~~~  370 (515)
                      .+..+.++  +++. ++++.+   .-+.+..+|..+++
T Consensus       360 ~~~~~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~~~~  397 (686)
T PRK10115        360 YVTWIAYNPEPETSRLRYGYSSMTTPDTLFELDMDTGE  397 (686)
T ss_pred             eEeeecccCCCCCceEEEEEecCCCCCEEEEEECCCCc
Confidence            33333444  3433 443332   24678888887764

>KOG2079|consensus

Probab=96.93  E-value=0.041  Score=55.13  Aligned_cols=101  Identities=14%  Similarity=0.214  Sum_probs=74.2

Q ss_pred             CCCEEEEEeCCCcEEEEEcccceE--EEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCC--Ccc
Q psy17610        264 DSKEAMSASTDGTCVLWDLIKSTR--LIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSD--VAA  339 (515)
Q Consensus       264 ~~~~l~~~~~d~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~--~~~  339 (515)
                      .+..++.++..|.+-..|+...-.  ..-.....++.+++|+.+|..++.|..+|.|.+||...++.++.+..+.  ...
T Consensus        98 ~~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~  177 (1206)
T KOG2079|consen   98 VVVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTG  177 (1206)
T ss_pred             eeeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccce
Confidence            456688888888898888765422  2233445689999999999999999999999999999999888876543  123


Q ss_pred             EEEEEEcCCCCEEEEEcCCCeEEEEEc
Q psy17610        340 VNCVDFVDDGKYFLTGGADQIVKMWMY  366 (515)
Q Consensus       340 i~~~~~~~~~~~l~~~~~dg~i~i~d~  366 (515)
                      +-.+.+..++..+.++...|.  +|.+
T Consensus       178 vi~v~~t~~nS~llt~D~~Gs--f~~l  202 (1206)
T KOG2079|consen  178 VIFVGRTSQNSKLLTSDTGGS--FWKL  202 (1206)
T ss_pred             EEEEEEeCCCcEEEEccCCCc--eEEE
Confidence            334445555667788877775  5544

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=96.93  E-value=0.31  Score=44.51  Aligned_cols=222  Identities=9%  Similarity=0.001  Sum_probs=105.6

Q ss_pred             CCCEEEEEe-cCceEEEEECCCC---ceeEEeecc---Cc----cCeEEEEeCCCCcEEEEEec------CCcEEEEeCC
Q psy17610         92 VNNKVFVGT-VNCEIFLIDMNSG---FTLTLVNTC---HT----SAIYDLQFPVNFSSVFATCS------KNDIRIWSVR  154 (515)
Q Consensus        92 ~~~~l~~~~-~d~~i~iw~~~~~---~~~~~~~~~---h~----~~v~~~~~~~~~~~l~~~~~------d~~i~iw~~~  154 (515)
                      +.++|++.+ ..++|+|.|+.+.   -.+.++...   +.    ..-..+..-|+|+.++++-.      .|.+.+.|-+
T Consensus        86 ~Rr~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~  165 (461)
T PF05694_consen   86 ERRYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVLLDGE  165 (461)
T ss_dssp             -S-EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEEE-TT
T ss_pred             cCCcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEEEcCc
Confidence            567777766 6789999999852   122333221   11    11223334578877777654      2458888888


Q ss_pred             CCceeEEEEecC---eEEEEEEEeeCCCEEEEEeC--------------------CCeEEEEecCCCceEEEecCCCCC-
Q psy17610        155 TLNELLRISVMN---MICACIVFTYDGKAILSGWN--------------------DGFIRCFTPQSGKLKFIIPNAHNR-  210 (515)
Q Consensus       155 ~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~--------------------dg~i~~~~~~~~~~~~~~~~~~~~-  210 (515)
                      +.+.........   .--..+.|.|..+.+++...                    ...+.+||+.+.+.++++..+..+ 
T Consensus       166 tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g~  245 (461)
T PF05694_consen  166 TFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEGQ  245 (461)
T ss_dssp             T--EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-TTEE
T ss_pred             cccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecCCCCC
Confidence            877776665322   22356778888888887642                    357999999999999988655444 


Q ss_pred             CeEEEEEcCC--CCE-EEEecCCCcEEEEEc-cCCceeeEEee--cc-----------------ccCceEEEEEecCCCE
Q psy17610        211 GVTALAITQD--GTR-LLSGGGEGQVRIWKL-TRESQSLQCVL--KE-----------------HTSSVSVIQIKSDSKE  267 (515)
Q Consensus       211 ~v~~~~~~~~--~~~-l~~~~~d~~i~iw~~-~~~~~~~~~~~--~~-----------------~~~~v~~~~~~~~~~~  267 (515)
                      .+..+.|..+  ..+ ++.+.-..+|..|-- +.+........  ..                 -..-|+.|.+|.|.++
T Consensus       246 ~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDDrf  325 (461)
T PF05694_consen  246 MPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDILISLDDRF  325 (461)
T ss_dssp             EEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------EEE-TTS-E
T ss_pred             ceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCceEeEEEccCCCE
Confidence            3557777553  333 332223344544433 22222222111  11                 1345789999999999


Q ss_pred             EEEEeC-CCcEEEEEcccc---eEEEEEEcC-----------------ccEEEEEEcCCCcEEEEEE
Q psy17610        268 AMSAST-DGTCVLWDLIKS---TRLIIMILP-----------------SMIMSAAYHPSEVQLITCS  313 (515)
Q Consensus       268 l~~~~~-d~~i~iwd~~~~---~~~~~~~~~-----------------~~~~~~~~~~~~~~l~~~~  313 (515)
                      |..... .|.++.||+...   +........                 +...-+..+.||++|++..
T Consensus       326 LYvs~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgPqMvqlS~DGkRlYvTn  392 (461)
T PF05694_consen  326 LYVSNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGPQMVQLSLDGKRLYVTN  392 (461)
T ss_dssp             EEEEETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S----EEE-TTSSEEEEE-
T ss_pred             EEEEcccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCCCCCeEEEccCCeEEEEEe
Confidence            887765 799999999764   233322221                 1235667778888777653

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=96.87  E-value=0.0036  Score=37.13  Aligned_cols=33  Identities=6%  Similarity=0.048  Sum_probs=29.4

Q ss_pred             ccEEEeeeccCCcEEEEeecCCeEEEEecCCCee
Q psy17610        442 SMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSI  475 (515)
Q Consensus       442 ~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~  475 (515)
                      ..|..++|+|...++|.++.+|.|.+|.+ +++.
T Consensus        12 ~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qr   44 (47)
T PF12894_consen   12 SRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQR   44 (47)
T ss_pred             CcEEEEEECCCCCEEEEEECCCeEEEEEC-CCcC
Confidence            45899999999999999999999999998 5544

>PF14727 PHTB1_N: PTHB1 N-terminus

Probab=96.80  E-value=0.44  Score=44.21  Aligned_cols=269  Identities=13%  Similarity=0.125  Sum_probs=145.4

Q ss_pred             ceEEEecCCCCeEEEEcCCCCCC---cccccc-cceEEeeccccccccccccccccccCcceeeecc-----------ce
Q psy17610          8 EFAYCGTTSGDILKLNLNYPSDL---SKVESD-TAAVLMGCYGKLIKKKVSTKLKDVNAEDVSLYSA-----------GV   72 (515)
Q Consensus         8 ~~~~~g~~~g~i~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~   72 (515)
                      ..+++|+.+|.+.+++......-   ..++.+ +.+++.-..+++.+......+.+-....+.+|+.           ..
T Consensus        38 d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~vY~v~~~~g~~~~g~~~  117 (418)
T PF14727_consen   38 DKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAVLHPRKLSVYSVSLVDGTVEHGNQY  117 (418)
T ss_pred             cEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEEecCCEEEEEEEEecCCCcccCcEE
Confidence            46999999999999998543211   122222 3456665555666666666666666666666643           12


Q ss_pred             EEEEEecC--CCcEEEEEEec----C-CCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecC
Q psy17610         73 TALYLLKD--DSGISSLQYNP----V-NNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSK  145 (515)
Q Consensus        73 ~~~~~~~~--~~~v~~~~~s~----~-~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d  145 (515)
                      .......|  ......++.-|    . ..++.+-+-||.+.+++-+. ......+.+ .--...+.|.|....+++++++
T Consensus       118 ~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~-~~f~~~lp~-~llPgPl~Y~~~tDsfvt~sss  195 (418)
T PF14727_consen  118 QLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQES-FAFSRFLPD-FLLPGPLCYCPRTDSFVTASSS  195 (418)
T ss_pred             EEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCc-EEEEEEcCC-CCCCcCeEEeecCCEEEEecCc
Confidence            22223333  33444444444    2 35778889999999999887 444444443 2223346777777788888888


Q ss_pred             CcEEEEeCCC--------------------Cce---eEEEEecCe--EEEEEEEeeCCCEEEEEeCCCeEEEEecCCCce
Q psy17610        146 NDIRIWSVRT--------------------LNE---LLRISVMNM--ICACIVFTYDGKAILSGWNDGFIRCFTPQSGKL  200 (515)
Q Consensus       146 ~~i~iw~~~~--------------------~~~---~~~~~~~~~--~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~  200 (515)
                      ..+.-|....                    ++.   -.++...+.  .+..+.++.....+++-++ ..+.+.+. +|+.
T Consensus       196 ~~l~~Yky~~La~~s~~~~~~~~~~~~~~~~k~l~~dWs~nlGE~~l~i~v~~~~~~~~~IvvLge-r~Lf~l~~-~G~l  273 (418)
T PF14727_consen  196 WTLECYKYQDLASASEASSRQSGTEQDISSGKKLNPDWSFNLGEQALDIQVVRFSSSESDIVVLGE-RSLFCLKD-NGSL  273 (418)
T ss_pred             eeEEEecHHHhhhccccccccccccccccccccccceeEEECCceeEEEEEEEcCCCCceEEEEec-ceEEEEcC-CCeE
Confidence            8888776421                    010   111111111  1223333333334444433 34666664 4554


Q ss_pred             EEEecCCCCCCeEEEE-Ec----CCC---CEEEEecCCCcEEEEEccCCceeeEEeeccccCce--EEEEEecCCCEEEE
Q psy17610        201 KFIIPNAHNRGVTALA-IT----QDG---TRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSV--SVIQIKSDSKEAMS  270 (515)
Q Consensus       201 ~~~~~~~~~~~v~~~~-~~----~~~---~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~  270 (515)
                      .....  .+....+++ |.    .++   ..++.++.++.+.||.=    ..+.........+|  ....+..-...+++
T Consensus       274 ~~~kr--Ld~~p~~~~~Y~~~~~~~~~~~~~llV~t~t~~LlVy~d----~~L~WsA~l~~~PVal~v~~~~~~~G~IV~  347 (418)
T PF14727_consen  274 RFQKR--LDYNPSCFCPYRVPWYNEPSTRLNLLVGTHTGTLLVYED----TTLVWSAQLPHVPVALSVANFNGLKGLIVS  347 (418)
T ss_pred             EEEEe--cCCceeeEEEEEeecccCCCCceEEEEEecCCeEEEEeC----CeEEEecCCCCCCEEEEecccCCCCceEEE
Confidence            44331  222222222 21    122   24888999999999973    22222222222222  22223334567788


Q ss_pred             EeCCCcEEEEEcccce
Q psy17610        271 ASTDGTCVLWDLIKST  286 (515)
Q Consensus       271 ~~~d~~i~iwd~~~~~  286 (515)
                      -+.+|.+.+--+-+..
T Consensus       348 Ls~~G~L~v~YLGTdP  363 (418)
T PF14727_consen  348 LSDEGQLSVSYLGTDP  363 (418)
T ss_pred             EcCCCcEEEEEeCCCC
Confidence            8888888887665443

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=96.74  E-value=0.54  Score=44.45  Aligned_cols=148  Identities=14%  Similarity=0.203  Sum_probs=91.3

Q ss_pred             CCeEEEEEcCCCCEEE-Eec--CCCcEEEEEccCCceeeEEeeccccCceEEEEEecC----CCEEEEEeCCCcEEEEEc
Q psy17610        210 RGVTALAITQDGTRLL-SGG--GEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSD----SKEAMSASTDGTCVLWDL  282 (515)
Q Consensus       210 ~~v~~~~~~~~~~~l~-~~~--~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~l~~~~~d~~i~iwd~  282 (515)
                      .++..++|. ||+.++ +.-  .+|.+++=|.     .    .-+.-..|..+.|.|-    ...+++......|.+|.+
T Consensus        20 HPvhGlaWT-DGkqVvLT~L~l~~gE~kfGds-----~----viGqFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL   89 (671)
T PF15390_consen   20 HPVHGLAWT-DGKQVVLTDLQLHNGEPKFGDS-----K----VIGQFEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQL   89 (671)
T ss_pred             ccccceEec-CCCEEEEEeeeeeCCccccCCc-----c----EeeccceeeeeeecCcccCCCCceEEEeccceEEEEEe
Confidence            467889998 455443 321  2333333221     1    2233456888999884    335777777889999987


Q ss_pred             cc-----ceEE--EEEEc--C--ccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCE
Q psy17610        283 IK-----STRL--IIMIL--P--SMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKY  351 (515)
Q Consensus       283 ~~-----~~~~--~~~~~--~--~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  351 (515)
                      ..     .+.+  +..+.  +  --...+.|+|....|++-.....-.+++.+......+......+.|.|.+|.+||+.
T Consensus        90 ~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~sV~~d~srVkaDi~~~G~IhCACWT~DG~R  169 (671)
T PF15390_consen   90 CPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSVLPSVHCDSSRVKADIKTSGLIHCACWTKDGQR  169 (671)
T ss_pred             ccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeEeeeeeeCCceEEEeccCCceEEEEEecCcCCE
Confidence            52     1111  11111  1  234678899999988887776665666666554444444444489999999999998


Q ss_pred             EEEEcC-CCeEEEEEcc
Q psy17610        352 FLTGGA-DQIVKMWMYR  367 (515)
Q Consensus       352 l~~~~~-dg~i~i~d~~  367 (515)
                      |+++-. .=.-++||-.
T Consensus       170 LVVAvGSsLHSyiWd~~  186 (671)
T PF15390_consen  170 LVVAVGSSLHSYIWDSA  186 (671)
T ss_pred             EEEEeCCeEEEEEecCc
Confidence            876643 3356788754

>PHA03098 kelch-like protein; Provisional

Probab=96.72  E-value=0.14  Score=50.41  Aligned_cols=187  Identities=14%  Similarity=0.072  Sum_probs=87.9

Q ss_pred             CCCEEEEEecC------ceEEEEECCCCceeEEeecc--CccCeEEEEeCCCCcEEEEEecC-----CcEEEEeCCCCce
Q psy17610         92 VNNKVFVGTVN------CEIFLIDMNSGFTLTLVNTC--HTSAIYDLQFPVNFSSVFATCSK-----NDIRIWSVRTLNE  158 (515)
Q Consensus        92 ~~~~l~~~~~d------~~i~iw~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~~~~~d-----~~i~iw~~~~~~~  158 (515)
                      ++..++.|+.+      ..+..||..+.. ......-  .......+..  ++..++.|+.+     ..+..||..+.+-
T Consensus       294 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~-W~~~~~~~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W  370 (534)
T PHA03098        294 NNVIYFIGGMNKNNLSVNSVVSYDTKTKS-WNKVPELIYPRKNPGVTVF--NNRIYVIGGIYNSISLNTVESWKPGESKW  370 (534)
T ss_pred             CCEEEEECCCcCCCCeeccEEEEeCCCCe-eeECCCCCcccccceEEEE--CCEEEEEeCCCCCEecceEEEEcCCCCce
Confidence            45666666643      257788887742 2221110  1111122222  45566666654     3477788766532


Q ss_pred             eE--EEEecCeEEEEEEEeeCCCEEEEEeCC------CeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCC
Q psy17610        159 LL--RISVMNMICACIVFTYDGKAILSGWND------GFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGE  230 (515)
Q Consensus       159 ~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d------g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  230 (515)
                      ..  .+...... .++ ..-+++..+.|+.+      ..+..||+.+++....-+.+....-.++. ..++...+.|+.+
T Consensus       371 ~~~~~lp~~r~~-~~~-~~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~  447 (534)
T PHA03098        371 REEPPLIFPRYN-PCV-VNVNNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYGGCAI-YHDGKIYVIGGIS  447 (534)
T ss_pred             eeCCCcCcCCcc-ceE-EEECCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccCceEE-EECCEEEEECCcc
Confidence            11  11111111 111 22356666666632      45888998877654322111111111222 2255666666643


Q ss_pred             C--------cEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCC-----CcEEEEEcccce
Q psy17610        231 G--------QVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTD-----GTCVLWDLIKST  286 (515)
Q Consensus       231 ~--------~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~  286 (515)
                      .        .+.+||..+++......+.........+.  .+++.++.|+.+     ..+.+||..+.+
T Consensus       448 ~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~  514 (534)
T PHA03098        448 YIDNIKVYNIVESYNPVTNKWTELSSLNFPRINASLCI--FNNKIYVVGGDKYEYYINEIEVYDDKTNT  514 (534)
T ss_pred             CCCCCcccceEEEecCCCCceeeCCCCCcccccceEEE--ECCEEEEEcCCcCCcccceeEEEeCCCCE
Confidence            2        37888886655544432222111111222  256666676654     356677766544

>PF14727 PHTB1_N: PTHB1 N-terminus

Probab=96.71  E-value=0.51  Score=43.79  Aligned_cols=269  Identities=12%  Similarity=0.081  Sum_probs=149.4

Q ss_pred             CCCEEEEEecCceEEEEECCCCc-ee--EEeeccCccCeEEEEeCC----CCcEEEEEecCCcEEEEeCCC--Cc-----
Q psy17610         92 VNNKVFVGTVNCEIFLIDMNSGF-TL--TLVNTCHTSAIYDLQFPV----NFSSVFATCSKNDIRIWSVRT--LN-----  157 (515)
Q Consensus        92 ~~~~l~~~~~d~~i~iw~~~~~~-~~--~~~~~~h~~~v~~~~~~~----~~~~l~~~~~d~~i~iw~~~~--~~-----  157 (515)
                      +...+++|+..|.++||+...+. ..  ......-..+|..++.-+    .....++.-..+.+.||.+..  |.     
T Consensus        36 ~~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~vY~v~~~~g~~~~g~  115 (418)
T PF14727_consen   36 GSDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAVLHPRKLSVYSVSLVDGTVEHGN  115 (418)
T ss_pred             CccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEEecCCEEEEEEEEecCCCcccCc
Confidence            34689999999999999986532 11  112222457888887532    234455666678888988732  11     


Q ss_pred             --eeEEEEecCeE--EEEEEEee----C-CCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEec
Q psy17610        158 --ELLRISVMNMI--CACIVFTY----D-GKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGG  228 (515)
Q Consensus       158 --~~~~~~~~~~~--v~~~~~~~----~-~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  228 (515)
                        .+..+..|.-.  ...++.-|    . ..++++-+-||.+.+|+-+.-.....++  .---.-.+.|.+..+.|++++
T Consensus       116 ~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~~lp--~~llPgPl~Y~~~tDsfvt~s  193 (418)
T PF14727_consen  116 QYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSRFLP--DFLLPGPLCYCPRTDSFVTAS  193 (418)
T ss_pred             EEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEEEcC--CCCCCcCeEEeecCCEEEEec
Confidence              22333333322  23333333    2 3578889999999999976655444442  222334568888888899999


Q ss_pred             CCCcEEEEEccCCc-------------------e--eeEEeeccccCceEEEEE---ecCCCEEEEEeCCCcEEEEEccc
Q psy17610        229 GEGQVRIWKLTRES-------------------Q--SLQCVLKEHTSSVSVIQI---KSDSKEAMSASTDGTCVLWDLIK  284 (515)
Q Consensus       229 ~d~~i~iw~~~~~~-------------------~--~~~~~~~~~~~~v~~~~~---~~~~~~l~~~~~d~~i~iwd~~~  284 (515)
                      .+..+.-|....-.                   .  .+...+. -...+..+..   +.....++.-++ .++.+.+. +
T Consensus       194 ss~~l~~Yky~~La~~s~~~~~~~~~~~~~~~~k~l~~dWs~n-lGE~~l~i~v~~~~~~~~~IvvLge-r~Lf~l~~-~  270 (418)
T PF14727_consen  194 SSWTLECYKYQDLASASEASSRQSGTEQDISSGKKLNPDWSFN-LGEQALDIQVVRFSSSESDIVVLGE-RSLFCLKD-N  270 (418)
T ss_pred             CceeEEEecHHHhhhccccccccccccccccccccccceeEEE-CCceeEEEEEEEcCCCCceEEEEec-ceEEEEcC-C
Confidence            88888888763100                   0  0000110 1122333333   222233443333 45666654 4


Q ss_pred             ceEEEEEEcCccEEEEEE-------cCC-CcEEEEEECCCeEEEEeCCCCceEEEEecCCCccE--EEEEEcCCCCEEEE
Q psy17610        285 STRLIIMILPSMIMSAAY-------HPS-EVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAV--NCVDFVDDGKYFLT  354 (515)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~-------~~~-~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i--~~~~~~~~~~~l~~  354 (515)
                      |.............+++.       .|+ ...+++++.++.+.+|.  ..+.+......+ .+|  .-..|..-...|++
T Consensus       271 G~l~~~krLd~~p~~~~~Y~~~~~~~~~~~~~llV~t~t~~LlVy~--d~~L~WsA~l~~-~PVal~v~~~~~~~G~IV~  347 (418)
T PF14727_consen  271 GSLRFQKRLDYNPSCFCPYRVPWYNEPSTRLNLLVGTHTGTLLVYE--DTTLVWSAQLPH-VPVALSVANFNGLKGLIVS  347 (418)
T ss_pred             CeEEEEEecCCceeeEEEEEeecccCCCCceEEEEEecCCeEEEEe--CCeEEEecCCCC-CCEEEEecccCCCCceEEE
Confidence            555555555544333331       112 12588899999999986  333333333332 232  22223333456777


Q ss_pred             EcCCCeEEEEEccC
Q psy17610        355 GGADQIVKMWMYRE  368 (515)
Q Consensus       355 ~~~dg~i~i~d~~~  368 (515)
                      -+.+|.+.+--+.+
T Consensus       348 Ls~~G~L~v~YLGT  361 (418)
T PF14727_consen  348 LSDEGQLSVSYLGT  361 (418)
T ss_pred             EcCCCcEEEEEeCC
Confidence            88888888766644

>KOG3630|consensus

Probab=96.54  E-value=0.032  Score=56.19  Aligned_cols=145  Identities=10%  Similarity=-0.021  Sum_probs=90.8

Q ss_pred             cCeEEEEeCCCCcEEEEEec--CCcEEEEeCCCCceeE-----EE------EecCeEEEEEEEeeCCC-EEEEEeCCCeE
Q psy17610        125 SAIYDLQFPVNFSSVFATCS--KNDIRIWSVRTLNELL-----RI------SVMNMICACIVFTYDGK-AILSGWNDGFI  190 (515)
Q Consensus       125 ~~v~~~~~~~~~~~l~~~~~--d~~i~iw~~~~~~~~~-----~~------~~~~~~v~~~~~~~~~~-~l~~~~~dg~i  190 (515)
                      -+|..+...+|+...++...  +-.|..+|+++...-.     -+      ........++.|.|.-. ..++...|+.|
T Consensus       101 ~pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl  180 (1405)
T KOG3630|consen  101 IPIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSL  180 (1405)
T ss_pred             ccceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccch
Confidence            45666777778766555544  3368889987543211     11      11222346778887532 35566778888


Q ss_pred             EEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeecc-ccCceEEEEEecCCCEEE
Q psy17610        191 RCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKE-HTSSVSVIQIKSDSKEAM  269 (515)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~  269 (515)
                      ++..+........- .......++++|+|.|+.++.|-.+|++.-|...-+....+...+. ....|.+++|-....+++
T Consensus       181 ~V~~~~~~~~~v~s-~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~leik~~ip~Pp~~e~yrvl~v~Wl~t~eflv  259 (1405)
T KOG3630|consen  181 RVKSTKQLAQNVTS-FPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSLEIKSEIPEPPVEENYRVLSVTWLSTQEFLV  259 (1405)
T ss_pred             hhhhhhhhhhhhcc-cCcccceeeEEeccccceeeEecCCCeEEEeecccceeecccCCCcCCCcceeEEEEecceeEEE
Confidence            88876543332222 2456678999999999999999999999998764221111111111 146789999987766665


Q ss_pred             E
Q psy17610        270 S  270 (515)
Q Consensus       270 ~  270 (515)
                      +
T Consensus       260 v  260 (1405)
T KOG3630|consen  260 V  260 (1405)
T ss_pred             E
Confidence            4

>KOG3630|consensus

Probab=96.52  E-value=0.048  Score=54.95  Aligned_cols=149  Identities=11%  Similarity=0.021  Sum_probs=93.9

Q ss_pred             EecCCCccEEEEEEcCCCCEEEEEcC--CCeEEEEEccCCeee-----eecc------CCCCCeeEEEECCCC-cEEEEE
Q psy17610        332 LEGSDVAAVNCVDFVDDGKYFLTGGA--DQIVKMWMYREGVPC-----FVGI------GHAASITKIKISPDK-KVIVSV  397 (515)
Q Consensus       332 ~~~~~~~~i~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~-----~~~~------~~~~~i~~~~~~~~~-~~l~~~  397 (515)
                      +..+...++..+...+|+...++...  +-.|..||+++-..-     .-+.      .......++.|.|.- ...+.+
T Consensus        95 ~~v~k~~pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~  174 (1405)
T KOG3630|consen   95 FKVEKEIPIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVD  174 (1405)
T ss_pred             eeeeccccceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhh
Confidence            33344456777788888776655433  347899998753211     1111      222345567888743 235566


Q ss_pred             eCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeee
Q psy17610        398 SADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIR  477 (515)
Q Consensus       398 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~  477 (515)
                      ..|+.|++..+.........                    .......++++|+|.|+.++.|...|++.-|.. +++...
T Consensus       175 l~dlsl~V~~~~~~~~~v~s--------------------~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P-~leik~  233 (1405)
T KOG3630|consen  175 LSDLSLRVKSTKQLAQNVTS--------------------FPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEP-SLEIKS  233 (1405)
T ss_pred             ccccchhhhhhhhhhhhhcc--------------------cCcccceeeEEeccccceeeEecCCCeEEEeec-ccceee
Confidence            67888888776543221111                    112234889999999999999999999998874 444444


Q ss_pred             eeccc---ccceEEEEEEcCCCcEEEE
Q psy17610        478 SLEGS---DVAAVNCVDFVDDGKYFLT  501 (515)
Q Consensus       478 ~~~~~---~~~~v~~~~~s~~~~~l~s  501 (515)
                      .+...   ...+|.+++|-..-.+|+.
T Consensus       234 ~ip~Pp~~e~yrvl~v~Wl~t~eflvv  260 (1405)
T KOG3630|consen  234 EIPEPPVEENYRVLSVTWLSTQEFLVV  260 (1405)
T ss_pred             cccCCCcCCCcceeEEEEecceeEEEE
Confidence            44332   2378999999887777765

>PHA03098 kelch-like protein; Provisional

Probab=96.46  E-value=0.32  Score=47.84  Aligned_cols=188  Identities=9%  Similarity=0.038  Sum_probs=92.9

Q ss_pred             eCCCEEEEEeCCC------eEEEEecCCCceEEEecCC-CCCCeEEEEEcCCCCEEEEecCC-----CcEEEEEccCCce
Q psy17610        176 YDGKAILSGWNDG------FIRCFTPQSGKLKFIIPNA-HNRGVTALAITQDGTRLLSGGGE-----GQVRIWKLTRESQ  243 (515)
Q Consensus       176 ~~~~~l~~~~~dg------~i~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iw~~~~~~~  243 (515)
                      .++..++.|+.++      .+..||..+++....-... .......+.  -++..++.|+.+     ..+..||..+...
T Consensus       293 ~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~R~~~~~~~--~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W  370 (534)
T PHA03098        293 LNNVIYFIGGMNKNNLSVNSVVSYDTKTKSWNKVPELIYPRKNPGVTV--FNNRIYVIGGIYNSISLNTVESWKPGESKW  370 (534)
T ss_pred             ECCEEEEECCCcCCCCeeccEEEEeCCCCeeeECCCCCcccccceEEE--ECCEEEEEeCCCCCEecceEEEEcCCCCce
Confidence            3455556665432      5778888877654322111 111122222  256677777765     3477788765554


Q ss_pred             eeEEeeccccCceEEEEEecCCCEEEEEeCC------CcEEEEEcccceEEEEEEcCccE-EEEEEcCCCcEEEEEECC-
Q psy17610        244 SLQCVLKEHTSSVSVIQIKSDSKEAMSASTD------GTCVLWDLIKSTRLIIMILPSMI-MSAAYHPSEVQLITCSTN-  315 (515)
Q Consensus       244 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~-  315 (515)
                      .....++...... +++ .-+++..+.|+.+      ..+..||+.+.+-......+.+. ...+...++..++.|+.+ 
T Consensus       371 ~~~~~lp~~r~~~-~~~-~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~  448 (534)
T PHA03098        371 REEPPLIFPRYNP-CVV-NVNNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYGGCAIYHDGKIYVIGGISY  448 (534)
T ss_pred             eeCCCcCcCCccc-eEE-EECCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccCceEEEECCEEEEECCccC
Confidence            4333332211111 122 2356666666632      35788888765433322222111 111222345566666542 


Q ss_pred             -------CeEEEEeCCCCceEEEEecCC-CccEEEEEEcCCCCEEEEEcCC-----CeEEEEEccCC
Q psy17610        316 -------KMIDYWETCDGSIIRSLEGSD-VAAVNCVDFVDDGKYFLTGGAD-----QIVKMWMYREG  369 (515)
Q Consensus       316 -------~~i~~~d~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~  369 (515)
                             ..+..||..+.+-...-.... ......+.+  ++++++.|+.+     +.+.+||..+.
T Consensus       449 ~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~  513 (534)
T PHA03098        449 IDNIKVYNIVESYNPVTNKWTELSSLNFPRINASLCIF--NNKIYVVGGDKYEYYINEIEVYDDKTN  513 (534)
T ss_pred             CCCCcccceEEEecCCCCceeeCCCCCcccccceEEEE--CCEEEEEcCCcCCcccceeEEEeCCCC
Confidence                   237888987765332211111 011112222  67777777754     46788887665

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=96.46  E-value=0.67  Score=42.12  Aligned_cols=251  Identities=13%  Similarity=0.080  Sum_probs=118.4

Q ss_pred             ceEEEEEecCCCEEEEEeCCCcEEEEEcccceE---EEEEE-----cCccEEEEEEcCC---CcEEEEEECC--------
Q psy17610        255 SVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTR---LIIMI-----LPSMIMSAAYHPS---EVQLITCSTN--------  315 (515)
Q Consensus       255 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~---~~~~~-----~~~~~~~~~~~~~---~~~l~~~~~~--------  315 (515)
                      ..+.|+|.||++.++ +...|.|++++ ..+..   +....     .......++++|+   ..+|.+....        
T Consensus         3 ~P~~~a~~pdG~l~v-~e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~~   80 (331)
T PF07995_consen    3 NPRSMAFLPDGRLLV-AERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGDN   80 (331)
T ss_dssp             SEEEEEEETTSCEEE-EETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSSE
T ss_pred             CceEEEEeCCCcEEE-EeCCceEEEEe-CCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCCc
Confidence            357899999987655 56699999999 34433   22221     1235799999994   3444433331        


Q ss_pred             -CeEEEEeCCCC-------ceE-EEEec--CCCccEEEEEEcCCCCEEEEEcCC-------------CeEEEEEccCCee
Q psy17610        316 -KMIDYWETCDG-------SII-RSLEG--SDVAAVNCVDFVDDGKYFLTGGAD-------------QIVKMWMYREGVP  371 (515)
Q Consensus       316 -~~i~~~d~~~~-------~~~-~~~~~--~~~~~i~~~~~~~~~~~l~~~~~d-------------g~i~i~d~~~~~~  371 (515)
                       ..|.-|....+       +.+ ..+..  ........|+|.|||.++++.+..             |.|.-.+.. ++.
T Consensus        81 ~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~~~~~~~~~~~~~~G~ilri~~d-G~~  159 (331)
T PF07995_consen   81 DNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDGGNDDNAQDPNSLRGKILRIDPD-GSI  159 (331)
T ss_dssp             EEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-TTTGGGGCSTTSSTTEEEEEETT-SSB
T ss_pred             ceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCCCCcccccccccccceEEEeccc-CcC
Confidence             23444444333       111 12222  122455679999999777665543             233323322 110


Q ss_pred             -------------eee-ccCCCCCeeEEEECCC-CcEEEEE-eCCCcEEEEeCCCCcCccCCC----cccce-e---eec
Q psy17610        372 -------------CFV-GIGHAASITKIKISPD-KKVIVSV-SADGGIFLWTFPELEDDVGDS----RSLSS-K---ISR  427 (515)
Q Consensus       372 -------------~~~-~~~~~~~i~~~~~~~~-~~~l~~~-~~dg~i~iw~~~~~~~~~~~~----~~~~~-~---~~~  427 (515)
                                   ... -.++. ....++|+|. +++.++= +.++.=.|-.+..+..---..    ..... .   ...
T Consensus       160 p~dnP~~~~~~~~~~i~A~GlR-N~~~~~~d~~tg~l~~~d~G~~~~dein~i~~G~nYGWP~~~~~~~~~~~~~~~~~~  238 (331)
T PF07995_consen  160 PADNPFVGDDGADSEIYAYGLR-NPFGLAFDPNTGRLWAADNGPDGWDEINRIEPGGNYGWPYCEGGPKYSGPPIGDAPS  238 (331)
T ss_dssp             -TTSTTTTSTTSTTTEEEE--S-EEEEEEEETTTTEEEEEEE-SSSSEEEEEE-TT-B--TTTBSSSCSTTSS-ECTGSS
T ss_pred             CCCCccccCCCceEEEEEeCCC-ccccEEEECCCCcEEEEccCCCCCcEEEEeccCCcCCCCCCcCCCCCCCCccccccC
Confidence                         000 01222 2357899998 6544432 223322333333322110000    00000 0   000


Q ss_pred             ccccccceeeecCcccEEEeeecc-------CCcEEEEeecCCeEEEEecCCCeeee---eecccccceEEEEEEcCCCc
Q psy17610        428 STARSTRLIIMILPSMIMSAAYHP-------SEVQLITCSTNKMIDYWETCDGSIIR---SLEGSDVAAVNCVDFVDDGK  497 (515)
Q Consensus       428 ~~~~~~~~~~~~~~~~i~~~~~s~-------~~~~l~~~~~dg~v~iwd~~~~~~~~---~~~~~~~~~v~~~~~s~~~~  497 (515)
                      ............+...+..+.|-.       .|.++++.-..+.|....+.++..+.   .+......++..+++.|||.
T Consensus       239 ~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~pDG~  318 (331)
T PF07995_consen  239 CPGFVPPVFAYPPHSAPTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQGPDGA  318 (331)
T ss_dssp             -TTS---SEEETTT--EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEETTSE
T ss_pred             CCCcCccceeecCccccCceEEECCccCccccCcEEEecCCCCEEEEEeeecCCCccceEEccccCCCCceEEEEcCCCe
Confidence            000111122223334566666653       35566666666788888876553222   22222225899999999999


Q ss_pred             EEEEeecCCeEE
Q psy17610        498 YFLTGGADQIVK  509 (515)
Q Consensus       498 ~l~s~~~dg~v~  509 (515)
                      +.++.+.+|.|.
T Consensus       319 Lyv~~d~~G~iy  330 (331)
T PF07995_consen  319 LYVSDDSDGKIY  330 (331)
T ss_dssp             EEEEE-TTTTEE
T ss_pred             EEEEECCCCeEe
Confidence            998888888663

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118

Probab=96.45  E-value=0.51  Score=40.76  Aligned_cols=209  Identities=15%  Similarity=0.200  Sum_probs=118.3

Q ss_pred             eEEEEeCCCCcEEEEEecCCcEEEEeCC------CCce-eEEEEe-----cCeEEEEEEEeeCCC------------EEE
Q psy17610        127 IYDLQFPVNFSSVFATCSKNDIRIWSVR------TLNE-LLRISV-----MNMICACIVFTYDGK------------AIL  182 (515)
Q Consensus       127 v~~~~~~~~~~~l~~~~~d~~i~iw~~~------~~~~-~~~~~~-----~~~~v~~~~~~~~~~------------~l~  182 (515)
                      -..|+++|.+...++....+...+||..      ..+. +..+..     .....+.+.|+....            .++
T Consensus        25 ~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~Fi  104 (336)
T TIGR03118        25 AWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSRFL  104 (336)
T ss_pred             cceeEecCCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccceeEE
Confidence            4678999998887877778999999986      1222 222221     123456666664322            367


Q ss_pred             EEeCCCeEEEEecCCCce-----EEEecCCCCCC-eEEEEEcC--CCCEEEEec-CCCcEEEEEccCCceeeEEee----
Q psy17610        183 SGWNDGFIRCFTPQSGKL-----KFIIPNAHNRG-VTALAITQ--DGTRLLSGG-GEGQVRIWKLTRESQSLQCVL----  249 (515)
Q Consensus       183 ~~~~dg~i~~~~~~~~~~-----~~~~~~~~~~~-v~~~~~~~--~~~~l~~~~-~d~~i~iw~~~~~~~~~~~~~----  249 (515)
                      .+++||+|.-|...-+..     ...+....... -..+++..  .+.+|..+. .+++|.+||-.-........+    
T Consensus       105 f~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~~~~~~g~F~DP~  184 (336)
T TIGR03118       105 FVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFRPPPLPGSFIDPA  184 (336)
T ss_pred             EEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCccccccCCCCccCCC
Confidence            788999999998643322     11221122222 33455543  345555443 578999998532211100000    


Q ss_pred             -ccccCc--e---------EEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCc---cEEEEEEcC------CCcE
Q psy17610        250 -KEHTSS--V---------SVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPS---MIMSAAYHP------SEVQ  308 (515)
Q Consensus       250 -~~~~~~--v---------~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---~~~~~~~~~------~~~~  308 (515)
                       +..-.+  |         +...-.++...=+.+..-|.|-++|+ .+..++.+....   ..+.++..|      .+..
T Consensus       185 iPagyAPFnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~-~G~l~~r~as~g~LNaPWG~a~APa~FG~~sg~l  263 (336)
T TIGR03118       185 LPAGYAPFNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTL-NGQLLRRVASSGRLNAPWGLAIAPESFGSLSGAL  263 (336)
T ss_pred             CCCCCCCcceEEECCeEEEEEEecCCcccccccCCCcceEEEEcC-CCcEEEEeccCCcccCCceeeeChhhhCCCCCCe
Confidence             000000  1         11111122222223334478999997 456666565443   356677655      4667


Q ss_pred             EEEEECCCeEEEEeCCCCceEEEEecCC
Q psy17610        309 LITCSTNKMIDYWETCDGSIIRSLEGSD  336 (515)
Q Consensus       309 l~~~~~~~~i~~~d~~~~~~~~~~~~~~  336 (515)
                      |+--..||+|..||..+++.+-.+....
T Consensus       264 LVGNFGDG~InaFD~~sG~~~g~L~~~~  291 (336)
T TIGR03118       264 LVGNFGDGTINAYDPQSGAQLGQLLDPD  291 (336)
T ss_pred             EEeecCCceeEEecCCCCceeeeecCCC
Confidence            7777779999999999999888777654

This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.

>PHA02790 Kelch-like protein; Provisional

Probab=96.43  E-value=0.3  Score=47.10  Aligned_cols=185  Identities=11%  Similarity=-0.047  Sum_probs=89.5

Q ss_pred             CCCEEEEEeCC-----CeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCC--CcEEEEEccCCceeeEEee
Q psy17610        177 DGKAILSGWND-----GFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGE--GQVRIWKLTRESQSLQCVL  249 (515)
Q Consensus       177 ~~~~l~~~~~d-----g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--~~i~iw~~~~~~~~~~~~~  249 (515)
                      ++..+++|+.+     ..+..||..+++....-.......-.+++ .-++...+.|+.+  ..+..||...+.......+
T Consensus       271 ~~~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~~~~v-~~~~~iYviGG~~~~~sve~ydp~~n~W~~~~~l  349 (480)
T PHA02790        271 GEVVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLYASGV-PANNKLYVVGGLPNPTSVERWFHGDAAWVNMPSL  349 (480)
T ss_pred             CCEEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCchhhcceEE-EECCEEEEECCcCCCCceEEEECCCCeEEECCCC
Confidence            44555666643     25777888877654322111111111222 2356677777754  3577888755544443333


Q ss_pred             ccccCceEEEEEecCCCEEEEEeCCC---cEEEEEcccceEEEEEEcCccE-EEEEEcCCCcEEEEEECCCeEEEEeCCC
Q psy17610        250 KEHTSSVSVIQIKSDSKEAMSASTDG---TCVLWDLIKSTRLIIMILPSMI-MSAAYHPSEVQLITCSTNKMIDYWETCD  325 (515)
Q Consensus       250 ~~~~~~v~~~~~~~~~~~l~~~~~d~---~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~i~~~d~~~  325 (515)
                      +......  ....-+++..+.|+.++   .+..||..+.+-...-..+.+. ...+..-+++..+.|   |...+||..+
T Consensus       350 ~~~r~~~--~~~~~~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~~~~~~~~~~IYv~G---G~~e~ydp~~  424 (480)
T PHA02790        350 LKPRCNP--AVASINNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYKSCALVFGRRLFLVG---RNAEFYCESS  424 (480)
T ss_pred             CCCCccc--EEEEECCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCccccceEEEECCEEEEEC---CceEEecCCC
Confidence            3212111  12233667777777553   4677887665433322222111 112223345555555   3467788876


Q ss_pred             CceEEEEecCC-CccEEEEEEcCCCCEEEEEcCC-----CeEEEEEccCC
Q psy17610        326 GSIIRSLEGSD-VAAVNCVDFVDDGKYFLTGGAD-----QIVKMWMYREG  369 (515)
Q Consensus       326 ~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~  369 (515)
                      .+-...-.... ..... ++ .-++++.++|+.+     ..+..||..++
T Consensus       425 ~~W~~~~~m~~~r~~~~-~~-v~~~~IYviGG~~~~~~~~~ve~Yd~~~~  472 (480)
T PHA02790        425 NTWTLIDDPIYPRDNPE-LI-IVDNKLLLIGGFYRGSYIDTIEVYNNRTY  472 (480)
T ss_pred             CcEeEcCCCCCCccccE-EE-EECCEEEEECCcCCCcccceEEEEECCCC
Confidence            54332211111 11222 22 2357788888754     24556665543

>PRK13684 Ycf48-like protein; Provisional

Probab=96.41  E-value=0.72  Score=41.97  Aligned_cols=272  Identities=14%  Similarity=0.105  Sum_probs=134.1

Q ss_pred             cCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeec---cCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCC
Q psy17610         79 KDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNT---CHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRT  155 (515)
Q Consensus        79 ~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~---~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~  155 (515)
                      +-...+.+|+|..+.+-+|+|. +|.|.. ..+.|+.-.....   ....++.++.|.++ .. .+++..+.|  +..++
T Consensus        43 ~~~~~l~~v~F~d~~~g~avG~-~G~il~-T~DgG~tW~~~~~~~~~~~~~l~~v~~~~~-~~-~~~G~~g~i--~~S~D  116 (334)
T PRK13684         43 PTEANLLDIAFTDPNHGWLVGS-NRTLLE-TNDGGETWEERSLDLPEENFRLISISFKGD-EG-WIVGQPSLL--LHTTD  116 (334)
T ss_pred             CCCCceEEEEEeCCCcEEEEEC-CCEEEE-EcCCCCCceECccCCcccccceeeeEEcCC-cE-EEeCCCceE--EEECC
Confidence            3467899999986666677665 443332 2233333222211   12334778888654 23 334444432  22222


Q ss_pred             -CceeEEEEe---cCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCC
Q psy17610        156 -LNELLRISV---MNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEG  231 (515)
Q Consensus       156 -~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~  231 (515)
                       |+.-..+..   .......+....++. +..++..|.|..= .+.|+.-..+...-...+..+.+.|++.+++++. .|
T Consensus       117 gG~tW~~~~~~~~~~~~~~~i~~~~~~~-~~~~g~~G~i~~S-~DgG~tW~~~~~~~~g~~~~i~~~~~g~~v~~g~-~G  193 (334)
T PRK13684        117 GGKNWTRIPLSEKLPGSPYLITALGPGT-AEMATNVGAIYRT-TDGGKNWEALVEDAAGVVRNLRRSPDGKYVAVSS-RG  193 (334)
T ss_pred             CCCCCeEccCCcCCCCCceEEEEECCCc-ceeeeccceEEEE-CCCCCCceeCcCCCcceEEEEEECCCCeEEEEeC-Cc
Confidence             222111110   111111122222222 3333444544322 2334433333234456788999999887666554 45


Q ss_pred             cEEE-EEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC-----ccEEEEEEcCC
Q psy17610        232 QVRI-WKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP-----SMIMSAAYHPS  305 (515)
Q Consensus       232 ~i~i-w~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-----~~~~~~~~~~~  305 (515)
                      .+.. ++-  ...........-...+..+.+.++++.++. +..|.+.+=....+..-.....+     ..+..+.+.|+
T Consensus       194 ~i~~s~~~--gg~tW~~~~~~~~~~l~~i~~~~~g~~~~v-g~~G~~~~~s~d~G~sW~~~~~~~~~~~~~l~~v~~~~~  270 (334)
T PRK13684        194 NFYSTWEP--GQTAWTPHQRNSSRRLQSMGFQPDGNLWML-ARGGQIRFNDPDDLESWSKPIIPEITNGYGYLDLAYRTP  270 (334)
T ss_pred             eEEEEcCC--CCCeEEEeeCCCcccceeeeEcCCCCEEEE-ecCCEEEEccCCCCCccccccCCccccccceeeEEEcCC
Confidence            4432 222  222222222334567889999998876665 45576653223333332222222     34678888887


Q ss_pred             CcEEEEEECCCeEEEEeCCCCceEEEEec--CCCccEEEEEEcCCCCEEEEEcCCCeEEEEE
Q psy17610        306 EVQLITCSTNKMIDYWETCDGSIIRSLEG--SDVAAVNCVDFVDDGKYFLTGGADQIVKMWM  365 (515)
Q Consensus       306 ~~~l~~~~~~~~i~~~d~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d  365 (515)
                      +..+++ +.+|.+.. ....++.-.....  ........+.+..+++.+++| ..|.|.-++
T Consensus       271 ~~~~~~-G~~G~v~~-S~d~G~tW~~~~~~~~~~~~~~~~~~~~~~~~~~~G-~~G~il~~~  329 (334)
T PRK13684        271 GEIWAG-GGNGTLLV-SKDGGKTWEKDPVGEEVPSNFYKIVFLDPEKGFVLG-QRGVLLRYV  329 (334)
T ss_pred             CCEEEE-cCCCeEEE-eCCCCCCCeECCcCCCCCcceEEEEEeCCCceEEEC-CCceEEEec
Confidence            775554 45665543 3344443333321  111356777777766666554 567776664

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=96.38  E-value=0.25  Score=45.66  Aligned_cols=153  Identities=14%  Similarity=0.102  Sum_probs=80.6

Q ss_pred             ccEEEEEEcCCCCEEEEEc-----------CCC-eEEEEEccC--Ce--eeeeccCCCCCeeEEEECCCCcEEEEEeCCC
Q psy17610        338 AAVNCVDFVDDGKYFLTGG-----------ADQ-IVKMWMYRE--GV--PCFVGIGHAASITKIKISPDKKVIVSVSADG  401 (515)
Q Consensus       338 ~~i~~~~~~~~~~~l~~~~-----------~dg-~i~i~d~~~--~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg  401 (515)
                      .....|+|.++|+++++-.           ..+ .|.+++-..  ++  ....+...-...+.+++.+++ +++ ++.. 
T Consensus        14 ~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G-lyV-~~~~-   90 (367)
T TIGR02604        14 RNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG-VYV-ATPP-   90 (367)
T ss_pred             CCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC-EEE-eCCC-
Confidence            4566889999999877653           223 677776543  22  223333334456889999988 444 4444 


Q ss_pred             cEEEE-eCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeec-------------------
Q psy17610        402 GIFLW-TFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCST-------------------  461 (515)
Q Consensus       402 ~i~iw-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-------------------  461 (515)
                      .|..+ +.............+.......        ...+......+.|.|||.+.++-+.                   
T Consensus        91 ~i~~~~d~~gdg~ad~~~~~l~~~~~~~--------~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~  162 (367)
T TIGR02604        91 DILFLRDKDGDDKADGEREVLLSGFGGQ--------INNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGL  162 (367)
T ss_pred             eEEEEeCCCCCCCCCCccEEEEEccCCC--------CCcccccccCceECCCCCEEEecccCCCceeccCCCccCccccc
Confidence            34433 4332111000000010000000        0001233678899999986554441                   


Q ss_pred             CCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEee
Q psy17610        462 NKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGG  503 (515)
Q Consensus       462 dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~  503 (515)
                      .|.|.-++..+++......+.  .....++|+|+|+++++-.
T Consensus       163 ~g~i~r~~pdg~~~e~~a~G~--rnp~Gl~~d~~G~l~~tdn  202 (367)
T TIGR02604       163 GGGLFRYNPDGGKLRVVAHGF--QNPYGHSVDSWGDVFFCDN  202 (367)
T ss_pred             CceEEEEecCCCeEEEEecCc--CCCccceECCCCCEEEEcc
Confidence            145666666555443222232  4567899999999877644

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=96.38  E-value=1.3  Score=44.57  Aligned_cols=74  Identities=15%  Similarity=0.267  Sum_probs=53.1

Q ss_pred             ccEEEEEEcCCCCEEEEEcCCCeEEEEEccC----------Cee---eeec--------cCCCCCeeEEEECCC---CcE
Q psy17610        338 AAVNCVDFVDDGKYFLTGGADQIVKMWMYRE----------GVP---CFVG--------IGHAASITKIKISPD---KKV  393 (515)
Q Consensus       338 ~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~----------~~~---~~~~--------~~~~~~i~~~~~~~~---~~~  393 (515)
                      ..|..+.++|+|++++..+..|.. |..+..          |+.   ..+.        ..+...|..+.|+|.   +..
T Consensus        85 f~v~~i~~n~~g~~lal~G~~~v~-V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~  163 (717)
T PF10168_consen   85 FEVHQISLNPTGSLLALVGPRGVV-VLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSH  163 (717)
T ss_pred             eeEEEEEECCCCCEEEEEcCCcEE-EEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCe
Confidence            568899999999999999887644 333321          111   1111        234567899999995   578


Q ss_pred             EEEEeCCCcEEEEeCCCCc
Q psy17610        394 IVSVSADGGIFLWTFPELE  412 (515)
Q Consensus       394 l~~~~~dg~i~iw~~~~~~  412 (515)
                      |+.-..|+++++||+....
T Consensus       164 l~vLtsdn~lR~y~~~~~~  182 (717)
T PF10168_consen  164 LVVLTSDNTLRLYDISDPQ  182 (717)
T ss_pred             EEEEecCCEEEEEecCCCC
Confidence            9999999999999997543

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=96.27  E-value=0.15  Score=49.97  Aligned_cols=162  Identities=10%  Similarity=0.062  Sum_probs=93.1

Q ss_pred             CCEEEEEcCCCeEEEEEccCCeeee------ec----------------cCCCCCeeEEEECC--CCcEEEEEeCCCcEE
Q psy17610        349 GKYFLTGGADQIVKMWMYREGVPCF------VG----------------IGHAASITKIKISP--DKKVIVSVSADGGIF  404 (515)
Q Consensus       349 ~~~l~~~~~dg~i~i~d~~~~~~~~------~~----------------~~~~~~i~~~~~~~--~~~~l~~~~~dg~i~  404 (515)
                      .++++++. .+.|.||+........      .+                ......|+.|....  +...|+.+.+||.|.
T Consensus        49 ~n~LFiA~-~s~I~Vy~~d~l~~~p~~~p~~~~~t~p~~~~~~D~~~s~~p~PHtIN~i~v~~lg~~EVLl~c~DdG~V~  127 (717)
T PF08728_consen   49 RNLLFIAY-QSEIYVYDPDGLTQLPSRKPCLRFDTKPEFTSTPDRLISTWPFPHTINFIKVGDLGGEEVLLLCTDDGDVL  127 (717)
T ss_pred             CCEEEEEE-CCEEEEEecCCcccccccccccccccCccccccccccccCCCCCceeeEEEecccCCeeEEEEEecCCeEE
Confidence            56676665 5689999875422110      11                00112355554443  456899999999999


Q ss_pred             EEeCCCCcCccCCCc-ccceeeecccccccceeeecCcccEEEeeec--cCCcEEEEeecCCeEEEEecCCC--eeeeee
Q psy17610        405 LWTFPELEDDVGDSR-SLSSKISRSTARSTRLIIMILPSMIMSAAYH--PSEVQLITCSTNKMIDYWETCDG--SIIRSL  479 (515)
Q Consensus       405 iw~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s--~~~~~l~~~~~dg~v~iwd~~~~--~~~~~~  479 (515)
                      +|.+........... .......+  ...........+.....++++  ...+++|+++....|.||-....  +....-
T Consensus       128 ~Yyt~~I~~~i~~~~~~~~~~~~r--~~i~P~f~~~v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVFaf~l~~~r~~~~~  205 (717)
T PF08728_consen  128 AYYTETIIEAIERFSEDNDSGFSR--LKIKPFFHLRVGASAWGLDIHDYKKSRLIAVSSNSQEVTVFAFALVDERFYHVP  205 (717)
T ss_pred             EEEHHHHHHHHHhhcccccccccc--ccCCCCeEeecCCceeEEEEEecCcceEEEEecCCceEEEEEEecccccccccc
Confidence            998754321111110 00000000  011111222344568889998  78889999988888888765432  211111


Q ss_pred             cccccceEEEEEEcCCC------cEEEEeecCCeEEEEEE
Q psy17610        480 EGSDVAAVNCVDFVDDG------KYFLTGGADQIVKICLY  513 (515)
Q Consensus       480 ~~~~~~~v~~~~~s~~~------~~l~s~~~dg~v~iw~~  513 (515)
                      ...+...|.+++|-++.      .+|++++-.|.+-+|++
T Consensus       206 s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I  245 (717)
T PF08728_consen  206 SHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI  245 (717)
T ss_pred             ccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence            11123679999997654      27888999999999887

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=96.25  E-value=0.65  Score=43.00  Aligned_cols=143  Identities=11%  Similarity=0.100  Sum_probs=79.6

Q ss_pred             CCcEEEEEEecCCCEEEEEe-----------cCc-eEEEEECCC--Cce-eEEeeccCccCeEEEEeCCCCcEEEEEecC
Q psy17610         81 DSGISSLQYNPVNNKVFVGT-----------VNC-EIFLIDMNS--GFT-LTLVNTCHTSAIYDLQFPVNFSSVFATCSK  145 (515)
Q Consensus        81 ~~~v~~~~~s~~~~~l~~~~-----------~d~-~i~iw~~~~--~~~-~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d  145 (515)
                      -.....|+|.++|+++++-.           ..+ .|.+++-.+  |.. ....+...-.....+++.+++  |++++..
T Consensus        13 ~~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G--lyV~~~~   90 (367)
T TIGR02604        13 LRNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG--VYVATPP   90 (367)
T ss_pred             cCCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC--EEEeCCC
Confidence            35678899999999776642           223 788876543  221 112222233456889999988  5555554


Q ss_pred             CcEEEEeCCCC-----ceeEE---EEec----CeEEEEEEEeeCCCEEEEEeCC-------------------CeEEEEe
Q psy17610        146 NDIRIWSVRTL-----NELLR---ISVM----NMICACIVFTYDGKAILSGWND-------------------GFIRCFT  194 (515)
Q Consensus       146 ~~i~iw~~~~~-----~~~~~---~~~~----~~~v~~~~~~~~~~~l~~~~~d-------------------g~i~~~~  194 (515)
                      ...++.+.+..     +....   +...    ......+.|.|||.+.++-+..                   |.|.-++
T Consensus        91 ~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~~  170 (367)
T TIGR02604        91 DILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFRYN  170 (367)
T ss_pred             eEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceEEEEe
Confidence            43344454321     11111   2111    2336789999999866544421                   3455556


Q ss_pred             cCCCceEEEecCCCCCCeEEEEEcCCCCEEEEe
Q psy17610        195 PQSGKLKFIIPNAHNRGVTALAITQDGTRLLSG  227 (515)
Q Consensus       195 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  227 (515)
                      ..+++.. .+..++ .....++|+++|+++++-
T Consensus       171 pdg~~~e-~~a~G~-rnp~Gl~~d~~G~l~~td  201 (367)
T TIGR02604       171 PDGGKLR-VVAHGF-QNPYGHSVDSWGDVFFCD  201 (367)
T ss_pred             cCCCeEE-EEecCc-CCCccceECCCCCEEEEc
Confidence            6554433 222333 334678888888776653

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]

Probab=96.14  E-value=0.066  Score=48.34  Aligned_cols=229  Identities=17%  Similarity=0.174  Sum_probs=125.4

Q ss_pred             CCCEEEEEeCCCeEEEEecCCCce----EEEecCCCCCCeEEEEEcCCCC--------EEEEecCCCcEEEEEccCC---
Q psy17610        177 DGKAILSGWNDGFIRCFTPQSGKL----KFIIPNAHNRGVTALAITQDGT--------RLLSGGGEGQVRIWKLTRE---  241 (515)
Q Consensus       177 ~~~~l~~~~~dg~i~~~~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~--------~l~~~~~d~~i~iw~~~~~---  241 (515)
                      ....++.+..+|.+.+....-...    -..++.+    -.-++..++|+        ..+....+....+++..++   
T Consensus       126 gqp~~alglsngqv~v~qp~~s~t~p~pg~~Fp~g----~~p~aLd~qgr~leh~~~~lalA~~~~~qf~~~~~t~~~~~  201 (733)
T COG4590         126 GQPWFALGLSNGQVAVVQPQLSHTMPTPGREFPPG----LEPLALDEQGRLLEHPLQQLALALTAEAQFATYDNTQQIQI  201 (733)
T ss_pred             CCceEEEeccCCeEEEEeccccccCCCCCccCCCC----CCccccCcccCcccchHHHhhhccchhhHHHHhhhhhhhhh
Confidence            445788888899998886432111    1111111    11122233332        2333444445555554321   


Q ss_pred             -------ceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEE-EE-Ec-Cc----cEE-EEEEcCCC
Q psy17610        242 -------SQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLI-IM-IL-PS----MIM-SAAYHPSE  306 (515)
Q Consensus       242 -------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~-~~-~~-~~----~~~-~~~~~~~~  306 (515)
                             .++....+......+..+-..|||+.+..-+. .++.++++.+..... .+ .. ++    .+. .+..-..+
T Consensus       202 L~g~~t~q~e~i~~L~~~~~~v~qllL~Pdg~~LYv~~g-~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg  280 (733)
T COG4590         202 LRGDRTTQQEIIRLLSVPFSDVSQLLLTPDGKTLYVRTG-SELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLSGG  280 (733)
T ss_pred             hhcccCchhhhhhhcCCCccchHhhEECCCCCEEEEecC-CeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHhCc
Confidence                   11222224444566778888999998887666 578888876543211 11 11 11    111 11123356


Q ss_pred             cEEEEEECCCeEEEE-eCCCCce-----EEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCC
Q psy17610        307 VQLITCSTNKMIDYW-ETCDGSI-----IRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAA  380 (515)
Q Consensus       307 ~~l~~~~~~~~i~~~-d~~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~  380 (515)
                      ..+++++.||.+.-| |.+.+..     ++.++... .++..+.-..+.+-+++-..+|++.++.....+.+..- .--.
T Consensus       281 ~SLLv~~~dG~vsQWFdvr~~~~p~l~h~R~f~l~p-a~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL~~-~~~~  358 (733)
T COG4590         281 FSLLVVHEDGLVSQWFDVRRDGQPHLNHIRNFKLAP-AEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLLFE-RAYQ  358 (733)
T ss_pred             eeEEEEcCCCceeeeeeeecCCCCcceeeeccccCc-ccceeeccccccceEEEEcCCCceeeeecccCcceehh-hhhc
Confidence            678888888888766 5443321     12222211 33444444445566777888888888876444333222 2223


Q ss_pred             CeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcC
Q psy17610        381 SITKIKISPDKKVIVSVSADGGIFLWTFPELED  413 (515)
Q Consensus       381 ~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~  413 (515)
                      .+.-+++||.+.+|++- ..|.++++.+++...
T Consensus       359 ~~~~~~~Sp~~~~Ll~e-~~gki~~~~l~Nr~P  390 (733)
T COG4590         359 APQLVAMSPNQAYLLSE-DQGKIRLAQLENRNP  390 (733)
T ss_pred             CcceeeeCcccchheee-cCCceEEEEecCCCC
Confidence            56778999999999876 567899998877643

>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118

Probab=96.07  E-value=0.85  Score=39.49  Aligned_cols=220  Identities=11%  Similarity=0.147  Sum_probs=126.5

Q ss_pred             EEEEEEeeCCCEEEEEeCCCeEEEEecC-------CCceEEEecCC----CCCCeEEEEEcCCCC------------EEE
Q psy17610        169 CACIVFTYDGKAILSGWNDGFIRCFTPQ-------SGKLKFIIPNA----HNRGVTALAITQDGT------------RLL  225 (515)
Q Consensus       169 v~~~~~~~~~~~l~~~~~dg~i~~~~~~-------~~~~~~~~~~~----~~~~v~~~~~~~~~~------------~l~  225 (515)
                      -+.++++|.+..-++....+...+||..       ...++..++..    .....+.+.|+....            .++
T Consensus        25 ~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~Fi  104 (336)
T TIGR03118        25 AWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSRFL  104 (336)
T ss_pred             cceeEecCCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccceeEE
Confidence            3678999999888888888899999986       12233344311    234577777775332            367


Q ss_pred             EecCCCcEEEEEccCCce---eeEEeec-cccCce-EEEEEec--CCCEEEEEe-CCCcEEEEEcccceEEE--EEEcCc
Q psy17610        226 SGGGEGQVRIWKLTRESQ---SLQCVLK-EHTSSV-SVIQIKS--DSKEAMSAS-TDGTCVLWDLIKSTRLI--IMILPS  295 (515)
Q Consensus       226 ~~~~d~~i~iw~~~~~~~---~~~~~~~-~~~~~v-~~~~~~~--~~~~l~~~~-~d~~i~iwd~~~~~~~~--~~~~~~  295 (515)
                      .+++||+|.-|...-...   .....+. .....| ..+++..  .+.+|+.+. ..++|.++|-.-.+...  .+..+.
T Consensus       105 f~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~~~~~~g~F~DP~  184 (336)
T TIGR03118       105 FVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFRPPPLPGSFIDPA  184 (336)
T ss_pred             EEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCccccccCCCCccCCC
Confidence            788999999998642222   1112222 112233 3455543  345555443 46888888753222110  011110


Q ss_pred             --------c---------EEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEec-CCCccEEEEEEcC------CCCE
Q psy17610        296 --------M---------IMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEG-SDVAAVNCVDFVD------DGKY  351 (515)
Q Consensus       296 --------~---------~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~i~~~~~~~------~~~~  351 (515)
                              .         |+-..-.++...=+.+...|.|-+||+ .++.++++.. ..-...+.|+..|      .|.+
T Consensus       185 iPagyAPFnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~-~G~l~~r~as~g~LNaPWG~a~APa~FG~~sg~l  263 (336)
T TIGR03118       185 LPAGYAPFNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTL-NGQLLRRVASSGRLNAPWGLAIAPESFGSLSGAL  263 (336)
T ss_pred             CCCCCCCcceEEECCeEEEEEEecCCcccccccCCCcceEEEEcC-CCcEEEEeccCCcccCCceeeeChhhhCCCCCCe
Confidence                    0         111111222222233444578999997 6677776642 2224556677755      4667


Q ss_pred             EEEEcCCCeEEEEEccCCeeeeeccCCC------CCeeEEEECC
Q psy17610        352 FLTGGADQIVKMWMYREGVPCFVGIGHA------ASITKIKISP  389 (515)
Q Consensus       352 l~~~~~dg~i~i~d~~~~~~~~~~~~~~------~~i~~~~~~~  389 (515)
                      |+----||+|..||..+++.+..+....      ..++.|+|..
T Consensus       264 LVGNFGDG~InaFD~~sG~~~g~L~~~~G~pi~i~GLWgL~fGn  307 (336)
T TIGR03118       264 LVGNFGDGTINAYDPQSGAQLGQLLDPDNHPVKVDGLWSLTFGN  307 (336)
T ss_pred             EEeecCCceeEEecCCCCceeeeecCCCCCeEEecCeEEeeeCC
Confidence            7766679999999999988777765443      2456777755

This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=95.85  E-value=1.2  Score=41.37  Aligned_cols=142  Identities=9%  Similarity=0.187  Sum_probs=88.9

Q ss_pred             CCcEEEEEec-CCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCC--------CEEEEEeCCCeEEEEecCC-CceEEEe
Q psy17610        135 NFSSVFATCS-KNDIRIWSVRTLNELLRISVMNMICACIVFTYDG--------KAILSGWNDGFIRCFTPQS-GKLKFII  204 (515)
Q Consensus       135 ~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~--------~~l~~~~~dg~i~~~~~~~-~~~~~~~  204 (515)
                      +...++..+. ...+.-.|++.|+.+.....+..-  -+.|.|+.        +.|+ |-.+..|.-.|++- |..+...
T Consensus       478 dssli~~dg~~~~kLykmDIErGkvveeW~~~ddv--vVqy~p~~kf~qmt~eqtlv-GlS~~svFrIDPR~~gNKi~v~  554 (776)
T COG5167         478 DSSLIYLDGGERDKLYKMDIERGKVVEEWDLKDDV--VVQYNPYFKFQQMTDEQTLV-GLSDYSVFRIDPRARGNKIKVV  554 (776)
T ss_pred             CcceEEecCCCcccceeeecccceeeeEeecCCcc--eeecCCchhHHhcCccceEE-eecccceEEecccccCCceeee
Confidence            3333433333 456777788899998888877665  46777743        3344 44455555556543 3222211


Q ss_pred             c---CCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEE
Q psy17610        205 P---NAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWD  281 (515)
Q Consensus       205 ~---~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd  281 (515)
                      .   ........+..-. ...+++.++..|-|++||.-  .......+++....|..+..+.+|+++++.+.. .+.+-|
T Consensus       555 esKdY~tKn~Fss~~tT-esGyIa~as~kGDirLyDRi--g~rAKtalP~lG~aIk~idvta~Gk~ilaTCk~-yllL~d  630 (776)
T COG5167         555 ESKDYKTKNKFSSGMTT-ESGYIAAASRKGDIRLYDRI--GKRAKTALPGLGDAIKHIDVTANGKHILATCKN-YLLLTD  630 (776)
T ss_pred             eehhccccccccccccc-cCceEEEecCCCceeeehhh--cchhhhcCcccccceeeeEeecCCcEEEEeecc-eEEEEe
Confidence            0   0112223333333 34589999999999999963  333445577788899999999999998887764 677777


Q ss_pred             cc
Q psy17610        282 LI  283 (515)
Q Consensus       282 ~~  283 (515)
                      ++
T Consensus       631 ~~  632 (776)
T COG5167         631 VP  632 (776)
T ss_pred             cc
Confidence            64

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=95.80  E-value=0.062  Score=30.81  Aligned_cols=34  Identities=12%  Similarity=0.323  Sum_probs=27.4

Q ss_pred             CcEEEEEEecC-C--CEEEEEecCceEEEEECCCCce
Q psy17610         82 SGISSLQYNPV-N--NKVFVGTVNCEIFLIDMNSGFT  115 (515)
Q Consensus        82 ~~v~~~~~s~~-~--~~l~~~~~d~~i~iw~~~~~~~  115 (515)
                      +.|.++.|||+ +  ++|+.+-..|.|.++|+.++..
T Consensus         1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~~f~   37 (43)
T PF10313_consen    1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRSNFM   37 (43)
T ss_pred             CCeEEEEeCCCCCcccEEEEEccCCeEEEEEcccCcc
Confidence            47899999984 4  5888888889999999986443

It contains a characteristic DLL sequence motif.

>PHA02790 Kelch-like protein; Provisional

Probab=95.78  E-value=0.94  Score=43.70  Aligned_cols=185  Identities=9%  Similarity=-0.007  Sum_probs=86.7

Q ss_pred             CCCEEEEEecC-----ceEEEEECCCCceeEEeec-cCccCeEEEEeCCCCcEEEEEecC--CcEEEEeCCCCceeEEEE
Q psy17610         92 VNNKVFVGTVN-----CEIFLIDMNSGFTLTLVNT-CHTSAIYDLQFPVNFSSVFATCSK--NDIRIWSVRTLNELLRIS  163 (515)
Q Consensus        92 ~~~~l~~~~~d-----~~i~iw~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~~~~~d--~~i~iw~~~~~~~~~~~~  163 (515)
                      ++..+++|+.+     ..+..||..++. -..... .....-.+++ .-++...++++.+  ..+..||..+++-...-.
T Consensus       271 ~~~lyviGG~~~~~~~~~v~~Ydp~~~~-W~~~~~m~~~r~~~~~v-~~~~~iYviGG~~~~~sve~ydp~~n~W~~~~~  348 (480)
T PHA02790        271 GEVVYLIGGWMNNEIHNNAIAVNYISNN-WIPIPPMNSPRLYASGV-PANNKLYVVGGLPNPTSVERWFHGDAAWVNMPS  348 (480)
T ss_pred             CCEEEEEcCCCCCCcCCeEEEEECCCCE-EEECCCCCchhhcceEE-EECCEEEEECCcCCCCceEEEECCCCeEEECCC
Confidence            45566777654     357778887642 111111 0111111222 2245555555543  457778866543211101


Q ss_pred             ecCeEEEEEEEeeCCCEEEEEeCCC---eEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccC
Q psy17610        164 VMNMICACIVFTYDGKAILSGWNDG---FIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTR  240 (515)
Q Consensus       164 ~~~~~v~~~~~~~~~~~l~~~~~dg---~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~  240 (515)
                      -...........-+|+..+.|+.++   .+..||.++++....-+......-.+++ .-+++..+.|   |.+.+||..+
T Consensus       349 l~~~r~~~~~~~~~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~~~~~-~~~~~IYv~G---G~~e~ydp~~  424 (480)
T PHA02790        349 LLKPRCNPAVASINNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYKSCAL-VFGRRLFLVG---RNAEFYCESS  424 (480)
T ss_pred             CCCCCcccEEEEECCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCccccceEE-EECCEEEEEC---CceEEecCCC
Confidence            0111111112233666667776543   4778898877654432111111111222 2355555665   3578899876


Q ss_pred             CceeeEEeeccccCceEEEEEecCCCEEEEEeCC-----CcEEEEEccc
Q psy17610        241 ESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTD-----GTCVLWDLIK  284 (515)
Q Consensus       241 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~  284 (515)
                      +.......+........ ++ .-+++..+.|+.+     ..+..||..+
T Consensus       425 ~~W~~~~~m~~~r~~~~-~~-v~~~~IYviGG~~~~~~~~~ve~Yd~~~  471 (480)
T PHA02790        425 NTWTLIDDPIYPRDNPE-LI-IVDNKLLLIGGFYRGSYIDTIEVYNNRT  471 (480)
T ss_pred             CcEeEcCCCCCCccccE-EE-EECCEEEEECCcCCCcccceEEEEECCC
Confidence            66655544432222222 22 2366777777754     2344555443

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=95.71  E-value=1  Score=44.07  Aligned_cols=110  Identities=14%  Similarity=0.163  Sum_probs=73.5

Q ss_pred             ceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEc--CccEEEEEE--cCCCcEEEEEECCCeEEEEeCC------
Q psy17610        255 SVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMIL--PSMIMSAAY--HPSEVQLITCSTNKMIDYWETC------  324 (515)
Q Consensus       255 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~--~~~~~~~~~--~~~~~~l~~~~~~~~i~~~d~~------  324 (515)
                      ...-+.-+.-++..++-+....+.|||.+.+........  ...|..+.|  .|+++.+++.+....|.+|--.      
T Consensus        31 ~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~  110 (631)
T PF12234_consen   31 NPSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTN  110 (631)
T ss_pred             CcceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhc
Confidence            344444445445444544556799999998875554444  667888887  4688999999999999888532      


Q ss_pred             ---CCceEEEEe--cCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEc
Q psy17610        325 ---DGSIIRSLE--GSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMY  366 (515)
Q Consensus       325 ---~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~  366 (515)
                         +..+++.+.  .....+|.+..|.++|.+++..+  +.+.|+|-
T Consensus       111 ~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~sG--Nqlfv~dk  155 (631)
T PF12234_consen  111 KGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGSG--NQLFVFDK  155 (631)
T ss_pred             CCcccceeEEEEeecCCCCCccceeEecCCeEEEEeC--CEEEEECC
Confidence               223444443  33446788999999987665443  47888864

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>KOG2280|consensus

Probab=95.68  E-value=2.3  Score=41.66  Aligned_cols=216  Identities=11%  Similarity=0.063  Sum_probs=113.3

Q ss_pred             CCcEEEEEEecCC-CEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCcee
Q psy17610         81 DSGISSLQYNPVN-NKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNEL  159 (515)
Q Consensus        81 ~~~v~~~~~s~~~-~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~  159 (515)
                      .++.-++..+|.. .-++  +.--.|+|++... ..+..+.-.|. .+-.+.|+.+ ..|++...+|++.++++.. +.+
T Consensus        43 ~gGpIAV~r~p~~~~~~~--~a~~~I~If~~sG-~lL~~~~w~~~-~lI~mgWs~~-eeLI~v~k~g~v~Vy~~~g-e~i  116 (829)
T KOG2280|consen   43 FGGPIAVTRSPSKLVPLY--SARPYIRIFNISG-QLLGRILWKHG-ELIGMGWSDD-EELICVQKDGTVHVYGLLG-EFI  116 (829)
T ss_pred             cCCceEEEeccccccccc--ccceeEEEEeccc-cchHHHHhcCC-CeeeecccCC-ceEEEEeccceEEEeecch-hhh
Confidence            3445566666622 1122  3345699999875 55555544454 7889999987 5888999999999999863 333


Q ss_pred             EEE----EecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCC--CCCeEEEEEcCCCC---EEEEec-C
Q psy17610        160 LRI----SVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAH--NRGVTALAITQDGT---RLLSGG-G  229 (515)
Q Consensus       160 ~~~----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~---~l~~~~-~  229 (515)
                      ...    ......|..+.+..+|  +++-..+|.+.+-+-.......+.+.-.  ..+-+|-...+++.   .++-.. .
T Consensus       117 e~~svg~e~~~~~I~ec~~f~~G--Vavlt~~g~v~~i~~~~~~~~~~~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~~  194 (829)
T KOG2280|consen  117 ESNSVGFESQMSDIVECRFFHNG--VAVLTVSGQVILINGVEEPKLRKMPDIPYNELPKSCWTVFQPHRQSTILLDVDVA  194 (829)
T ss_pred             cccccccccccCceeEEEEecCc--eEEEecCCcEEEEcCCCcchhhhCCCCCCccCCCcceeEecCCCcceeEEeechh
Confidence            221    1122234445555455  4544556666554422222222222111  11112222222211   111111 0


Q ss_pred             CCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEc--CccEEEEEEcCCC
Q psy17610        230 EGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMIL--PSMIMSAAYHPSE  306 (515)
Q Consensus       230 d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~  306 (515)
                      .+ ..++.......... .+......+..+..+|+.++|+--...|.+.+-+....+....+..  ..+...++|.-+.
T Consensus       195 v~-~~~~q~~~~~~q~~-~~~~~~~~~~ki~VS~n~~~laLyt~~G~i~~vs~D~~~~lce~~~~~~~~p~qm~Wcgnd  271 (829)
T KOG2280|consen  195 VG-LHICQVEESRVQLH-ALSWPNSSVVKISVSPNRRFLALYTETGKIWVVSIDLSQILCEFNCTDHDPPKQMAWCGND  271 (829)
T ss_pred             hh-hcccceeccccccc-ccCCCCceEEEEEEcCCcceEEEEecCCcEEEEecchhhhhhccCCCCCCchHhceeecCC
Confidence            00 11222211111111 1222235677889999999999999999999888776666655542  2333456665444

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=95.66  E-value=0.54  Score=45.88  Aligned_cols=111  Identities=15%  Similarity=0.133  Sum_probs=73.2

Q ss_pred             EEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEc--CCCCEEEEecCCCcEEEEEcc-----C--
Q psy17610        170 ACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAIT--QDGTRLLSGGGEGQVRIWKLT-----R--  240 (515)
Q Consensus       170 ~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~d~~i~iw~~~-----~--  240 (515)
                      .-+.-+.-++.-++-+....+.|||...+...........+.|.++.|.  |+++.+++.+..+.|.++.-.     .  
T Consensus        33 ~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~  112 (631)
T PF12234_consen   33 SLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKG  112 (631)
T ss_pred             ceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCC
Confidence            3344444454444444456799999999886655433567889999995  488888888888999998542     1  


Q ss_pred             CceeeEE--eecccc-CceEEEEEecCCCEEEEEeCCCcEEEEEc
Q psy17610        241 ESQSLQC--VLKEHT-SSVSVIQIKSDSKEAMSASTDGTCVLWDL  282 (515)
Q Consensus       241 ~~~~~~~--~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~iwd~  282 (515)
                      +....+.  .+..++ .+|.+..|.++|..++.++  ..+.++|-
T Consensus       113 p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~sG--Nqlfv~dk  155 (631)
T PF12234_consen  113 PSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGSG--NQLFVFDK  155 (631)
T ss_pred             cccceeEEEEeecCCCCCccceeEecCCeEEEEeC--CEEEEECC
Confidence            1112222  223344 6788999999987665544  46888764

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>KOG2377|consensus

Probab=95.55  E-value=0.83  Score=41.68  Aligned_cols=142  Identities=11%  Similarity=0.083  Sum_probs=89.4

Q ss_pred             EEEEEEecCCCEEEEEecCceEEEEECCC--CceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCcee--
Q psy17610         84 ISSLQYNPVNNKVFVGTVNCEIFLIDMNS--GFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNEL--  159 (515)
Q Consensus        84 v~~~~~s~~~~~l~~~~~d~~i~iw~~~~--~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~--  159 (515)
                      -+.+-|...++.|+ +...|...=|-.+.  ..-+..+-....++|.++.||+|.+.+++--.+++|.+.+....+..  
T Consensus        25 sngvFfDDaNkqlf-avrSggatgvvvkgpndDVpiSfdm~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~  103 (657)
T KOG2377|consen   25 SNGVFFDDANKQLF-AVRSGGATGVVVKGPNDDVPISFDMDDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLE  103 (657)
T ss_pred             ccceeeccCcceEE-EEecCCeeEEEEeCCCCCCCceeeecCCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhH
Confidence            34455654444433 33444455565543  12233333346679999999999988888888999999998433322  


Q ss_pred             --EEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEec
Q psy17610        160 --LRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGG  228 (515)
Q Consensus       160 --~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  228 (515)
                        .+.+.....|....|+.+ .-+|.....| +.+|.....+....+.+.|...|+-..|.++.+.++.++
T Consensus       104 ~~~~ck~k~~~IlGF~W~~s-~e~A~i~~~G-~e~y~v~pekrslRlVks~~~nvnWy~yc~et~v~LL~t  172 (657)
T KOG2377|consen  104 YTQECKTKNANILGFCWTSS-TEIAFITDQG-IEFYQVLPEKRSLRLVKSHNLNVNWYMYCPETAVILLST  172 (657)
T ss_pred             HHHHhccCcceeEEEEEecC-eeEEEEecCC-eEEEEEchhhhhhhhhhhcccCccEEEEccccceEeeec
Confidence              223344556888889866 4566666666 677765544332223367888899999999887655443

>PRK13684 Ycf48-like protein; Provisional

Probab=95.54  E-value=1.8  Score=39.36  Aligned_cols=149  Identities=12%  Similarity=0.055  Sum_probs=84.9

Q ss_pred             cCceEEEEEecCCCEEEEEeCCCcEEEE-EcccceEEEEE--EcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceE
Q psy17610        253 TSSVSVIQIKSDSKEAMSASTDGTCVLW-DLIKSTRLIIM--ILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSII  329 (515)
Q Consensus       253 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw-d~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~  329 (515)
                      ...+..+.+.|++.+++ .+..|.+..- +- .++.-...  .....+..+.+.++++.++++ ..|.+++-....+..-
T Consensus       172 ~g~~~~i~~~~~g~~v~-~g~~G~i~~s~~~-gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg-~~G~~~~~s~d~G~sW  248 (334)
T PRK13684        172 AGVVRNLRRSPDGKYVA-VSSRGNFYSTWEP-GQTAWTPHQRNSSRRLQSMGFQPDGNLWMLA-RGGQIRFNDPDDLESW  248 (334)
T ss_pred             cceEEEEEECCCCeEEE-EeCCceEEEEcCC-CCCeEEEeeCCCcccceeeeEcCCCCEEEEe-cCCEEEEccCCCCCcc
Confidence            45688888888876554 4445554432 21 12222222  233468889999998877665 5566654333344332


Q ss_pred             EEEecC---CCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeecc---CCCCCeeEEEECCCCcEEEEEeCCCcE
Q psy17610        330 RSLEGS---DVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGI---GHAASITKIKISPDKKVIVSVSADGGI  403 (515)
Q Consensus       330 ~~~~~~---~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~dg~i  403 (515)
                      .....+   ....+..+.+.|++..++++ .+|.+. .....++.-....   .-....+.+.|..+++.++ .+..|.|
T Consensus       249 ~~~~~~~~~~~~~l~~v~~~~~~~~~~~G-~~G~v~-~S~d~G~tW~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~~G~i  325 (334)
T PRK13684        249 SKPIIPEITNGYGYLDLAYRTPGEIWAGG-GNGTLL-VSKDGGKTWEKDPVGEEVPSNFYKIVFLDPEKGFV-LGQRGVL  325 (334)
T ss_pred             ccccCCccccccceeeEEEcCCCCEEEEc-CCCeEE-EeCCCCCCCeECCcCCCCCcceEEEEEeCCCceEE-ECCCceE
Confidence            222222   12457788999988766555 566554 3444444333322   2224577888877776655 5577888


Q ss_pred             EEEe
Q psy17610        404 FLWT  407 (515)
Q Consensus       404 ~iw~  407 (515)
                      .-|+
T Consensus       326 l~~~  329 (334)
T PRK13684        326 LRYV  329 (334)
T ss_pred             EEec
Confidence            7775

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=95.53  E-value=0.69  Score=46.46  Aligned_cols=94  Identities=13%  Similarity=0.257  Sum_probs=57.3

Q ss_pred             CCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCC-cCccCCCcccceeeecccccccceeeecCcccEEEeeeccC---Cc
Q psy17610        379 AASITKIKISPDKKVIVSVSADGGIFLWTFPEL-EDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPS---EV  454 (515)
Q Consensus       379 ~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~---~~  454 (515)
                      .-.|..+.++|+|++|+..|..| |.|-.++.. ...............+...-............|..+.|+|.   +.
T Consensus        84 ~f~v~~i~~n~~g~~lal~G~~~-v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~  162 (717)
T PF10168_consen   84 LFEVHQISLNPTGSLLALVGPRG-VVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDS  162 (717)
T ss_pred             ceeEEEEEECCCCCEEEEEcCCc-EEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCC
Confidence            45789999999999999998865 555555432 11100000000001111111112222334567999999997   47


Q ss_pred             EEEEeecCCeEEEEecCCC
Q psy17610        455 QLITCSTNKMIDYWETCDG  473 (515)
Q Consensus       455 ~l~~~~~dg~v~iwd~~~~  473 (515)
                      +|++-..|+.+|+||+...
T Consensus       163 ~l~vLtsdn~lR~y~~~~~  181 (717)
T PF10168_consen  163 HLVVLTSDNTLRLYDISDP  181 (717)
T ss_pred             eEEEEecCCEEEEEecCCC
Confidence            8999999999999999754

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A

Probab=95.46  E-value=2.8  Score=40.93  Aligned_cols=362  Identities=12%  Similarity=0.084  Sum_probs=156.7

Q ss_pred             CeEEEEeCCCCcEEEEEecCCcEEEEeCCC-----CceeEEEE---ecCeEEEEEEEee-----CCCEEEEE--eCCC--
Q psy17610        126 AIYDLQFPVNFSSVFATCSKNDIRIWSVRT-----LNELLRIS---VMNMICACIVFTY-----DGKAILSG--WNDG--  188 (515)
Q Consensus       126 ~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~-----~~~~~~~~---~~~~~v~~~~~~~-----~~~~l~~~--~~dg--  188 (515)
                      +-..++..|.++.++.+..++.+.|+-++.     ......+.   .....|..++|..     +...++.-  ...+  
T Consensus        45 ~G~~l~vDP~~R~i~v~a~e~~~~v~~l~~~~~~~~~~~~~~~~pi~s~~~i~~~~FL~~~~~~~~p~la~L~~~~~~~~  124 (504)
T PF10433_consen   45 PGQYLAVDPSGRCIAVSAYEGNFLVYPLNRSLDSDIAFSPHINSPIKSEGNILDMCFLHPSVGYDNPTLAILYVDSQRRT  124 (504)
T ss_dssp             T--EEEE-TTSSEEEEEEBTTEEEEEE-SS----T-TT---EEEE--S-SEEEEEEEES---S-SS-EEEEEEEETT-EE
T ss_pred             CCcEEEECCcCCEEEEEecCCeEEEEEecccccccccccccccccccCCceEEEEEEEecccCCCCceEEEEEEEecccc
Confidence            456788999999999999999999998887     11111111   1256678888875     23344432  2222  


Q ss_pred             eEEEEe--cCCCce------EEE--ecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEc-cCCc--ee-eEEeec-c-c
Q psy17610        189 FIRCFT--PQSGKL------KFI--IPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKL-TRES--QS-LQCVLK-E-H  252 (515)
Q Consensus       189 ~i~~~~--~~~~~~------~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~-~~~~--~~-~~~~~~-~-~  252 (515)
                      .+..++  ...+..      ...  +...+..+..-+..-.....+++++. + +.+|.- ....  .. .....+ . .
T Consensus       125 ~~~~y~w~~~~~l~~~~~~~~~~~~l~~~~~~p~~LIPlp~~~ggllV~~~-~-~i~y~~~~~~~~~~~~~~~~~~~~~~  202 (504)
T PF10433_consen  125 HLVTYEWSLDDGLNHVISKSTLPIRLPNEDELPSFLIPLPNPPGGLLVGGE-N-IIIYKNHLIGSGDYSFLSIPSPPSSS  202 (504)
T ss_dssp             EEEEEE--------EETTTTEEEE--EEEE-TTEEEEEE-TTT-SEEEEES-S-EEEEEE------TTEEEEE--H-HHH
T ss_pred             eeEEEeeecccccceeeeeccccccccccCCCccEEEEcCCCCcEEEEECC-E-EEEEecccccccccccccccCCccCC
Confidence            233443  322211      000  11111222222222222223443433 2 344432 1110  11 111111 1 1


Q ss_pred             cCceEEEE-------EecCCCEEEEEeCCCcEEEEEcccce---EEEEEEc-CccEEEEEEcCCC-cEEEEEEC--CCeE
Q psy17610        253 TSSVSVIQ-------IKSDSKEAMSASTDGTCVLWDLIKST---RLIIMIL-PSMIMSAAYHPSE-VQLITCST--NKMI  318 (515)
Q Consensus       253 ~~~v~~~~-------~~~~~~~l~~~~~d~~i~iwd~~~~~---~~~~~~~-~~~~~~~~~~~~~-~~l~~~~~--~~~i  318 (515)
                      ..-+.+..       ...++..++.+.++|.+....+....   .+..+.. .....++++..++ .+++.|+.  |+.+
T Consensus       203 ~~~~~~~~~p~~~~~~~~~~~~~lL~~e~G~l~~l~l~~~~~~i~i~~~g~~~~~~s~l~~l~~g~d~lf~gs~~gds~l  282 (504)
T PF10433_consen  203 SSLWTSWARPERNISYDKDGDRILLQDEDGDLYLLTLDNDGGSISITYLGTLCSIASSLTYLKNGGDYLFVGSEFGDSQL  282 (504)
T ss_dssp             TS-EEEEEE------SSTTSSEEEEEETTSEEEEEEEEEEEEEEEEEEEEE--S-ESEEEEESTT--EEEEEESSS-EEE
T ss_pred             CceEEEEEeccccceecCCCCEEEEEeCCCeEEEEEEEECCCeEEEEEcCCcCChhheEEEEcCCCEEEEEEEecCCcEE
Confidence            22223332       23467789999999999988877644   2333333 3445566665555 46667766  4455


Q ss_pred             EEEeCCCCceEEEEecCCCccEEEEEEcCC----C-------CEEEEEc--CCCeEEEEEccCCeeee----eccCC--C
Q psy17610        319 DYWETCDGSIIRSLEGSDVAAVNCVDFVDD----G-------KYFLTGG--ADQIVKMWMYREGVPCF----VGIGH--A  379 (515)
Q Consensus       319 ~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~----~-------~~l~~~~--~dg~i~i~d~~~~~~~~----~~~~~--~  379 (515)
                      ..+....-+.+..+..-  +++..+++.+.    .       +++++.+  .+|.+++..-  |-...    ....-  -
T Consensus       283 ~~~~~~~l~~~~~~~N~--~Pi~D~~v~~~~~~~~~~~~~~~~lv~~sG~g~~gsL~~lr~--Gi~~~~~~~~~~~l~~v  358 (504)
T PF10433_consen  283 LQISLSNLEVLDSLPNW--GPIVDFCVVDSSNSGQPSNPSSDQLVACSGAGKRGSLRILRN--GIGIEGLELASSELPGV  358 (504)
T ss_dssp             EEEESESEEEEEEE------SEEEEEEE-TSSSSS-------EEEEEESSGGG-EEEEEEE--SBEEE--EEEEEEESTE
T ss_pred             EEEeCCCcEEEEeccCc--CCccceEEeccccCCCCcccccceEEEEECcCCCCcEEEEec--cCCceeeeeeccCCCCc
Confidence            55664455555666554  78888887531    1       3344433  4678887743  32222    11111  1


Q ss_pred             CCeeEEEECC-CCcEEEEEeCCCcEEEEeCCC--CcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEE
Q psy17610        380 ASITKIKISP-DKKVIVSVSADGGIFLWTFPE--LEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQL  456 (515)
Q Consensus       380 ~~i~~~~~~~-~~~~l~~~~~dg~i~iw~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l  456 (515)
                      ..+..+.... +..+|+.+..+ .-+++.+..  ..++...... .             .+......+.+-.+.  +..+
T Consensus       359 ~~iW~l~~~~~~~~~lv~S~~~-~T~vl~~~~~d~~e~~~e~~~-~-------------~f~~~~~Tl~~~~~~--~~~i  421 (504)
T PF10433_consen  359 TGIWTLKLSSSDHSYLVLSFPN-ETRVLQISEGDDGEEVEEVEE-D-------------GFDTDEPTLAAGNVG--DGRI  421 (504)
T ss_dssp             EEEEEE-SSSSSBSEEEEEESS-EEEEEEES----SSEEEEE-----------------TS-SSS-EEEEEEET--TTEE
T ss_pred             eEEEEeeecCCCceEEEEEcCC-ceEEEEEecccCCcchhhhhh-c-------------cCCCCCCCeEEEEcC--CCeE
Confidence            2233333222 24566666554 455666542  1100000000 0             000000112122222  3333


Q ss_pred             EEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEEEEEE
Q psy17610        457 ITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLY  513 (515)
Q Consensus       457 ~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~  513 (515)
                      +=.. ...|++.+...++............|.+.+..  +.+++.+-.++.+.++.+
T Consensus       422 vQVt-~~~i~l~~~~~~~~~~~w~~~~~~~I~~a~~~--~~~v~v~~~~~~~~~~~~  475 (504)
T PF10433_consen  422 VQVT-PKGIRLIDLEDGKLTQEWKPPAGSIIVAASIN--DPQVLVALSGGELVYFEL  475 (504)
T ss_dssp             EEEE-SSEEEEEESSSTSEEEEEE-TTS---SEEEES--SSEEEEEE-TTEEEEEEE
T ss_pred             EEEe-cCeEEEEECCCCeEEEEEeCCCCCeEEEEEEC--CCEEEEEEeCCcEEEEEE
Confidence            3333 33488888777777766654443566666664  345566666777777654

...

>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]

Probab=95.37  E-value=0.091  Score=47.49  Aligned_cols=232  Identities=15%  Similarity=0.087  Sum_probs=126.1

Q ss_pred             CCCEEEEEecCceEEEEECCCCce---eEEeeccCccCeEEEEeCCCC--------cEEEEEecCCcEEEEeCCC-----
Q psy17610         92 VNNKVFVGTVNCEIFLIDMNSGFT---LTLVNTCHTSAIYDLQFPVNF--------SSVFATCSKNDIRIWSVRT-----  155 (515)
Q Consensus        92 ~~~~l~~~~~d~~i~iw~~~~~~~---~~~~~~~h~~~v~~~~~~~~~--------~~l~~~~~d~~i~iw~~~~-----  155 (515)
                      ...+++.|..||.+.+...+-...   ....+...   -.-++..+.|        +..++...+....+++...     
T Consensus       126 gqp~~alglsngqv~v~qp~~s~t~p~pg~~Fp~g---~~p~aLd~qgr~leh~~~~lalA~~~~~qf~~~~~t~~~~~L  202 (733)
T COG4590         126 GQPWFALGLSNGQVAVVQPQLSHTMPTPGREFPPG---LEPLALDEQGRLLEHPLQQLALALTAEAQFATYDNTQQIQIL  202 (733)
T ss_pred             CCceEEEeccCCeEEEEeccccccCCCCCccCCCC---CCccccCcccCcccchHHHhhhccchhhHHHHhhhhhhhhhh
Confidence            456889999999999987542111   01111100   1112222222        2233333344444444322     


Q ss_pred             -------CceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEE-ecCCCCC----CeE-EEEEcCCCC
Q psy17610        156 -------LNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFI-IPNAHNR----GVT-ALAITQDGT  222 (515)
Q Consensus       156 -------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~-~~~~~~~----~v~-~~~~~~~~~  222 (515)
                             ++.+..+......+..+-..|||+.+..-+. .++.++++.+...... +.....+    .|+ .+..-..|.
T Consensus       203 ~g~~t~q~e~i~~L~~~~~~v~qllL~Pdg~~LYv~~g-~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg~  281 (733)
T COG4590         203 RGDRTTQQEIIRLLSVPFSDVSQLLLTPDGKTLYVRTG-SELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLSGGF  281 (733)
T ss_pred             hcccCchhhhhhhcCCCccchHhhEECCCCCEEEEecC-CeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHhCce
Confidence                   2223334455567788889999998887665 6788888776543221 1111111    122 122233456


Q ss_pred             EEEEecCCCcEEEE-EccCCceeeE---EeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEE
Q psy17610        223 RLLSGGGEGQVRIW-KLTRESQSLQ---CVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIM  298 (515)
Q Consensus       223 ~l~~~~~d~~i~iw-~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~  298 (515)
                      -++++..||.|.-| |.+.......   ..++-...++..+.-..+.+-+++-+..|++..+.....+.+.....-..+.
T Consensus       282 SLLv~~~dG~vsQWFdvr~~~~p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL~~~~~~~~~  361 (733)
T COG4590         282 SLLVVHEDGLVSQWFDVRRDGQPHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLLFERAYQAPQ  361 (733)
T ss_pred             eEEEEcCCCceeeeeeeecCCCCcceeeeccccCcccceeeccccccceEEEEcCCCceeeeecccCcceehhhhhcCcc
Confidence            68888999988877 4443322222   1222222344444333344567778888888887765544443333334567


Q ss_pred             EEEEcCCCcEEEEEECCCeEEEEeCCCCce
Q psy17610        299 SAAYHPSEVQLITCSTNKMIDYWETCDGSI  328 (515)
Q Consensus       299 ~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~  328 (515)
                      -++++|++.++++- ..|.++++.+++..+
T Consensus       362 ~~~~Sp~~~~Ll~e-~~gki~~~~l~Nr~P  390 (733)
T COG4590         362 LVAMSPNQAYLLSE-DQGKIRLAQLENRNP  390 (733)
T ss_pred             eeeeCcccchheee-cCCceEEEEecCCCC
Confidence            78899999988764 456788887766543

>KOG1896|consensus

Probab=95.29  E-value=4.4  Score=42.18  Aligned_cols=176  Identities=15%  Similarity=0.184  Sum_probs=94.6

Q ss_pred             CeEEEEeCCCCceEEEEecCCCccEEEEEEcC---------CCCEEEEEcC---------CCeEEEEEccC-----Ceee
Q psy17610        316 KMIDYWETCDGSIIRSLEGSDVAAVNCVDFVD---------DGKYFLTGGA---------DQIVKMWMYRE-----GVPC  372 (515)
Q Consensus       316 ~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~---------~~~~l~~~~~---------dg~i~i~d~~~-----~~~~  372 (515)
                      ..|.+....+++.+..++......+.++....         ...+|++|..         .|.+.|+|+-.     +++.
T Consensus      1004 f~i~LisP~sw~vi~~iefq~~E~v~~~k~v~L~~~~t~~~~k~ylavGT~~~~gEDv~~RGr~hi~diIeVVPepgkP~ 1083 (1366)
T KOG1896|consen 1004 FSIQLISPESWEVIDKIEFQENEHVLHMKYVILDDEETTKGKKPYLAVGTAFIQGEDVPARGRIHIFDIIEVVPEPGKPF 1083 (1366)
T ss_pred             ceeEEecCCccccccccccCccceeeEEEEEEEEecccccCCcceEEEEEeecccccccCcccEEEEEEEEecCCCCCCc
Confidence            34566666666666655555545555554421         1347777743         48899998732     3222


Q ss_pred             e-----e--ccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEE
Q psy17610        373 F-----V--GIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIM  445 (515)
Q Consensus       373 ~-----~--~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  445 (515)
                      .     .  .+...++|..++=- +|. |+++ ....|.+|+++........                  .+.  .-++.
T Consensus      1084 t~~KlKel~~eE~KGtVsavceV-~G~-l~~~-~GqKI~v~~l~r~~~ligV------------------aFi--D~~~y 1140 (1366)
T KOG1896|consen 1084 TKNKLKELYIEEQKGTVSAVCEV-RGH-LLSS-QGQKIIVRKLDRDSELIGV------------------AFI--DLPLY 1140 (1366)
T ss_pred             ccceeeeeehhhcccceEEEEEe-ccE-EEEc-cCcEEEEEEeccCCcceee------------------EEe--cccee
Confidence            1     1  13445667665542 454 5544 3457999998543211000                  000  00111


Q ss_pred             EeeeccCCcEEEEeecCCeEEEEecCCCeeeeee--cccccceEEEEEEcCCCc--EEEEeecCCeEEEEEEe
Q psy17610        446 SAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSL--EGSDVAAVNCVDFVDDGK--YFLTGGADQIVKICLYI  514 (515)
Q Consensus       446 ~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~--~~~~~~~v~~~~~s~~~~--~l~s~~~dg~v~iw~~~  514 (515)
                      -....--+++++.|+--..|.+...+..-....+  .....-.+.++.|--||.  +++.+..|+.|+++-|.
T Consensus      1141 v~s~~~vknlIl~gDV~ksisfl~fqeep~rlsL~srd~~~l~v~s~EFLVdg~~L~flvsDa~rNi~vy~Y~ 1213 (1366)
T KOG1896|consen 1141 VHSMKVVKNLILAGDVMKSISFLGFQEEPYRLSLLSRDFEPLNVYSTEFLVDGSNLSFLVSDADRNIHVYMYA 1213 (1366)
T ss_pred             EEehhhhhhheehhhhhhceEEEEEccCceEEEEeecCCchhhceeeeeEEcCCeeEEEEEcCCCcEEEEEeC
Confidence            1122223556777766666666554432222222  222234577788866665  57788999999999874

>smart00036 CNH Domain found in NIK1-like kinases, mouse citron and yeast ROM1, ROM2

Probab=95.23  E-value=2.2  Score=38.24  Aligned_cols=234  Identities=15%  Similarity=0.142  Sum_probs=115.8

Q ss_pred             CCCEEEEEecCceEEEEECCCC-ceeEEeeccCccCeEEEEeCCCCcEEEEEec-CCcEEEEeCCCCce-----------
Q psy17610         92 VNNKVFVGTVNCEIFLIDMNSG-FTLTLVNTCHTSAIYDLQFPVNFSSVFATCS-KNDIRIWSVRTLNE-----------  158 (515)
Q Consensus        92 ~~~~l~~~~~d~~i~iw~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~-----------  158 (515)
                      ++++|+.|+.+| +++.+.... ..+....  +..+|+++...+..+.|++-+. ...++.+++..-..           
T Consensus        12 ~~~~lL~GTe~G-ly~~~~~~~~~~~~kl~--~~~~v~q~~v~~~~~lLi~Lsgk~~~L~~~~L~~L~~~~~~~~~~~~~   88 (302)
T smart00036       12 DGKWLLVGTEEG-LYVLNISDQPGTLEKLI--GRRSVTQIWVLEENNVLLMISGKKPQLYSHPLSALVEKKEALGSARLV   88 (302)
T ss_pred             CCcEEEEEeCCc-eEEEEcccCCCCeEEec--CcCceEEEEEEhhhCEEEEEeCCcceEEEEEHHHhhhhhhccCCcccc
Confidence            346899999998 555556542 2334433  6678999999988777777665 34499999853321           


Q ss_pred             ----eEEEEecCeEEEEEEEeeCC-CEEEEEeCCCeEEEEecCCC--c--eEEE---ecCCCCCCeEEEEEcCC--CCEE
Q psy17610        159 ----LLRISVMNMICACIVFTYDG-KAILSGWNDGFIRCFTPQSG--K--LKFI---IPNAHNRGVTALAITQD--GTRL  224 (515)
Q Consensus       159 ----~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~~~~~~~--~--~~~~---~~~~~~~~v~~~~~~~~--~~~l  224 (515)
                          ....-.+............. ..++++....+|.++.....  +  ....   .......++..+..+++  ...+
T Consensus        89 ~~~~~~~~~~~tkGc~~~~v~~~~~~~~l~~A~~~~i~l~~~~~~~~~f~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l  168 (302)
T smart00036       89 IRKNVLTKIPDTKGCHLCAVVNGKRSLFLCVALQSSVVLLQWYNPLKKFKLFKSKFLFPLISPVPVFVELVSSSFERPGI  168 (302)
T ss_pred             ccccceEeCCcCCceEEEEEEcCCCcEEEEEEcCCeEEEEEccChhhhhhhhcccccccCCCCccceEeeecccccceEE
Confidence                01111222222323333222 23344445566777643322  1  1111   00111233334433332  4567


Q ss_pred             EEecCCCcEEEEEccCC--c-ee--eEEeecccc-CceEEEEEecCCCEEEEEeCCCcEEEEEccc--ceEEEEEEcCcc
Q psy17610        225 LSGGGEGQVRIWKLTRE--S-QS--LQCVLKEHT-SSVSVIQIKSDSKEAMSASTDGTCVLWDLIK--STRLIIMILPSM  296 (515)
Q Consensus       225 ~~~~~d~~i~iw~~~~~--~-~~--~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~--~~~~~~~~~~~~  296 (515)
                      ..|+..+...++++...  . ..  ......... .++.... -+++.++++ -.+ ...+-|...  ......+.-+..
T Consensus       169 cvG~~~~~~~~~~~~~~~~~~~d~sl~~~~~~~~~~p~~i~~-l~~~e~Llc-~~~-~~v~Vn~~G~~~~r~~~l~w~~~  245 (302)
T smart00036      169 CIGSDKGGGDVVQFHESLVSKEDLSLPFLSEETSLKPISVVQ-VPRDEFLLC-YDE-FGVFVNLYGKRRSRNPILHWEFM  245 (302)
T ss_pred             EEEEcCCCCeEEEEeecccccccccccccccccccCceEEEE-ECCCeEEEE-ECc-EEEEEeCCCCccccceEEEcCCc
Confidence            77766433445554320  0 00  000011111 3333333 344444443 332 344445442  122233445556


Q ss_pred             EEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEec
Q psy17610        297 IMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEG  334 (515)
Q Consensus       297 ~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~  334 (515)
                      +.++++..  .++++-. +..|.++++.+++.++.+..
T Consensus       246 p~~~~~~~--pyll~~~-~~~ievr~l~~~~l~q~i~~  280 (302)
T smart00036      246 PESFAYHS--PYLLAFH-DNGIEIRSIKTGELLQELAD  280 (302)
T ss_pred             ccEEEEEC--CEEEEEc-CCcEEEEECCCCceEEEEec
Confidence            66777763  5665554 45599999999998888764

Unpublished observations.

>PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A

Probab=95.19  E-value=3.4  Score=40.33  Aligned_cols=383  Identities=16%  Similarity=0.135  Sum_probs=166.0

Q ss_pred             CcEEEEEEecCCCEEEEEecCceEEEEECCC----C----ceeEEeeccCccCeEEEEeCC-----CCcEEEEEec--CC
Q psy17610         82 SGISSLQYNPVNNKVFVGTVNCEIFLIDMNS----G----FTLTLVNTCHTSAIYDLQFPV-----NFSSVFATCS--KN  146 (515)
Q Consensus        82 ~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~----~----~~~~~~~~~h~~~v~~~~~~~-----~~~~l~~~~~--d~  146 (515)
                      ..-.-++.+|.++.++.+..++.+.++.++.    +    ......+ .....|.+++|-.     +...+++--.  .+
T Consensus        44 ~~G~~l~vDP~~R~i~v~a~e~~~~v~~l~~~~~~~~~~~~~~~~pi-~s~~~i~~~~FL~~~~~~~~p~la~L~~~~~~  122 (504)
T PF10433_consen   44 QPGQYLAVDPSGRCIAVSAYEGNFLVYPLNRSLDSDIAFSPHINSPI-KSEGNILDMCFLHPSVGYDNPTLAILYVDSQR  122 (504)
T ss_dssp             TT--EEEE-TTSSEEEEEEBTTEEEEEE-SS----T-TT---EEEE---S-SEEEEEEEES---S-SS-EEEEEEEETT-
T ss_pred             cCCcEEEECCcCCEEEEEecCCeEEEEEecccccccccccccccccc-cCCceEEEEEEEecccCCCCceEEEEEEEecc
Confidence            3455788999999999999999999998876    1    0111111 1256678888864     2334444332  22


Q ss_pred             --cEEEEe--CCCCce------eEE--EE-ecCeEEEEEEEeeC-CCEEEEEeCCCeEEEEecCC--C-ceEEEecCC--
Q psy17610        147 --DIRIWS--VRTLNE------LLR--IS-VMNMICACIVFTYD-GKAILSGWNDGFIRCFTPQS--G-KLKFIIPNA--  207 (515)
Q Consensus       147 --~i~iw~--~~~~~~------~~~--~~-~~~~~v~~~~~~~~-~~~l~~~~~dg~i~~~~~~~--~-~~~~~~~~~--  207 (515)
                        .+..++  ...+-.      ...  +. ....+..-+. .|. ...+++++ ++.+.+-+...  + .....+...  
T Consensus       123 ~~~~~~y~w~~~~~l~~~~~~~~~~~~l~~~~~~p~~LIP-lp~~~ggllV~~-~~~i~y~~~~~~~~~~~~~~~~~~~~  200 (504)
T PF10433_consen  123 RTHLVTYEWSLDDGLNHVISKSTLPIRLPNEDELPSFLIP-LPNPPGGLLVGG-ENIIIYKNHLIGSGDYSFLSIPSPPS  200 (504)
T ss_dssp             EEEEEEEE--------EETTTTEEEE--EEEE-TTEEEEE-E-TTT-SEEEEE-SSEEEEEE------TTEEEEE--H-H
T ss_pred             cceeEEEeeecccccceeeeeccccccccccCCCccEEEE-cCCCCcEEEEEC-CEEEEEecccccccccccccccCCcc
Confidence              233433  332110      000  10 1111111111 222 22344443 33333332211  1 111222111  


Q ss_pred             -CCCCeEEEEE-------cCCCCEEEEecCCCcEEEEEccCCceeeEEeeccc-cCceEEEEEecCC-CEEEEEeC--CC
Q psy17610        208 -HNRGVTALAI-------TQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEH-TSSVSVIQIKSDS-KEAMSAST--DG  275 (515)
Q Consensus       208 -~~~~v~~~~~-------~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~-~~l~~~~~--d~  275 (515)
                       ...-+.+...       ..++..++.+.++|.+....+...........-+. .....++.+..++ .+++.|+.  |+
T Consensus       201 ~~~~~~~~~~~p~~~~~~~~~~~~~lL~~e~G~l~~l~l~~~~~~i~i~~~g~~~~~~s~l~~l~~g~d~lf~gs~~gds  280 (504)
T PF10433_consen  201 SSSSLWTSWARPERNISYDKDGDRILLQDEDGDLYLLTLDNDGGSISITYLGTLCSIASSLTYLKNGGDYLFVGSEFGDS  280 (504)
T ss_dssp             HHTS-EEEEEE------SSTTSSEEEEEETTSEEEEEEEEEEEEEEEEEEEEE--S-ESEEEEESTT--EEEEEESSS-E
T ss_pred             CCCceEEEEEeccccceecCCCCEEEEEeCCCeEEEEEEEECCCeEEEEEcCCcCChhheEEEEcCCCEEEEEEEecCCc
Confidence             1222333332       44677888899999999988854332222222233 4555677776665 36777776  44


Q ss_pred             cEEEEEcccceEEEEEEcCccEEEEEEcCC----Cc------EEEEEEC---CCeEEEEeCCCCceEE-----EEecCCC
Q psy17610        276 TCVLWDLIKSTRLIIMILPSMIMSAAYHPS----EV------QLITCST---NKMIDYWETCDGSIIR-----SLEGSDV  337 (515)
Q Consensus       276 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~----~~------~l~~~~~---~~~i~~~d~~~~~~~~-----~~~~~~~  337 (515)
                      .+..+.....+.+..+..-+++..+++.+.    ..      .+++++.   +|.+++..  .|-...     .......
T Consensus       281 ~l~~~~~~~l~~~~~~~N~~Pi~D~~v~~~~~~~~~~~~~~~~lv~~sG~g~~gsL~~lr--~Gi~~~~~~~~~~~l~~v  358 (504)
T PF10433_consen  281 QLLQISLSNLEVLDSLPNWGPIVDFCVVDSSNSGQPSNPSSDQLVACSGAGKRGSLRILR--NGIGIEGLELASSELPGV  358 (504)
T ss_dssp             EEEEEESESEEEEEEE----SEEEEEEE-TSSSSS-------EEEEEESSGGG-EEEEEE--ESBEEE--EEEEEEESTE
T ss_pred             EEEEEeCCCcEEEEeccCcCCccceEEeccccCCCCcccccceEEEEECcCCCCcEEEEe--ccCCceeeeeeccCCCCc
Confidence            555666555666777777789999888532    22      5555543   66787764  332222     2222222


Q ss_pred             ccEEEEEEcC-CCCEEEEEcCCCeEEEEEcc---CCeeeeec-----cCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeC
Q psy17610        338 AAVNCVDFVD-DGKYFLTGGADQIVKMWMYR---EGVPCFVG-----IGHAASITKIKISPDKKVIVSVSADGGIFLWTF  408 (515)
Q Consensus       338 ~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~---~~~~~~~~-----~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~  408 (515)
                      ..++.+.... +..+|+....+ .-+++.+.   ..+.+...     ......+.+-.+.  +.+++=.... .|++.+.
T Consensus       359 ~~iW~l~~~~~~~~~lv~S~~~-~T~vl~~~~~d~~e~~~e~~~~~f~~~~~Tl~~~~~~--~~~ivQVt~~-~i~l~~~  434 (504)
T PF10433_consen  359 TGIWTLKLSSSDHSYLVLSFPN-ETRVLQISEGDDGEEVEEVEEDGFDTDEPTLAAGNVG--DGRIVQVTPK-GIRLIDL  434 (504)
T ss_dssp             EEEEEE-SSSSSBSEEEEEESS-EEEEEEES----SSEEEEE---TS-SSS-EEEEEEET--TTEEEEEESS-EEEEEES
T ss_pred             eEEEEeeecCCCceEEEEEcCC-ceEEEEEecccCCcchhhhhhccCCCCCCCeEEEEcC--CCeEEEEecC-eEEEEEC
Confidence            3444444333 24566666654 44455553   22332211     1111122222221  2233322222 3555554


Q ss_pred             CCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeeccc----cc
Q psy17610        409 PELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGS----DV  484 (515)
Q Consensus       409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~----~~  484 (515)
                      .......                   .........|.+.+.  ++.+++.+..++.+..+.+............    -.
T Consensus       435 ~~~~~~~-------------------~w~~~~~~~I~~a~~--~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  493 (504)
T PF10433_consen  435 EDGKLTQ-------------------EWKPPAGSIIVAASI--NDPQVLVALSGGELVYFELDDNKISVSDNDETILELD  493 (504)
T ss_dssp             SSTSEEE-------------------EEE-TTS---SEEEE--SSSEEEEEE-TTEEEEEEEETTEEEEEEE----EE-S
T ss_pred             CCCeEEE-------------------EEeCCCCCeEEEEEE--CCCEEEEEEeCCcEEEEEEECCceeeeeeccccccCC
Confidence            3221000                   000001222444444  3456777777888999988777664333211    12


Q ss_pred             ceEEEEEEcC
Q psy17610        485 AAVNCVDFVD  494 (515)
Q Consensus       485 ~~v~~~~~s~  494 (515)
                      ..|.|+...|
T Consensus       494 ~eis~l~i~p  503 (504)
T PF10433_consen  494 NEISCLSIEP  503 (504)
T ss_dssp             S-EEEEE---
T ss_pred             CceEEEEeCC
Confidence            6788888776

...

>KOG1916|consensus

Probab=95.11  E-value=0.034  Score=54.51  Aligned_cols=94  Identities=14%  Similarity=0.165  Sum_probs=61.0

Q ss_pred             CeEEEEeCC--CCceEE----EEecCCCccEEEEEEcC---CCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEE
Q psy17610        316 KMIDYWETC--DGSIIR----SLEGSDVAAVNCVDFVD---DGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIK  386 (515)
Q Consensus       316 ~~i~~~d~~--~~~~~~----~~~~~~~~~i~~~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~  386 (515)
                      |.+.+||+.  .|+...    +...+....+.-+.|.|   +.-++..+-.++.+++........ ..+.+|...++.++
T Consensus       153 g~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~~-~l~rsHs~~~~d~a  231 (1283)
T KOG1916|consen  153 GELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLKGGEIRLLNINRALR-SLFRSHSQRVTDMA  231 (1283)
T ss_pred             hhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeeccCCCceeEeeechHHH-HHHHhcCCCcccHH
Confidence            456667653  333322    22233334455566655   556777788888888877755332 44556777666554


Q ss_pred             -----------ECCCCcEEEEEeCCCcEEEEeCCC
Q psy17610        387 -----------ISPDKKVIVSVSADGGIFLWTFPE  410 (515)
Q Consensus       387 -----------~~~~~~~l~~~~~dg~i~iw~~~~  410 (515)
                                 .||||..+++++.||.++.|.+.-
T Consensus       232 ~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiyi  266 (1283)
T KOG1916|consen  232 FFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIYI  266 (1283)
T ss_pred             HHhhchhhheeeCCCCcEEEEeecCCccceeeeee
Confidence                       589999999999999999998654

>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]

Probab=95.05  E-value=3.6  Score=42.21  Aligned_cols=203  Identities=14%  Similarity=0.144  Sum_probs=112.0

Q ss_pred             cEEEEEECCCeEEEEeCCCCceEEEEe-------cCCCccEEEE--EEcCCCCEEEEEcCC---CeEEEEEccC--C---
Q psy17610        307 VQLITCSTNKMIDYWETCDGSIIRSLE-------GSDVAAVNCV--DFVDDGKYFLTGGAD---QIVKMWMYRE--G---  369 (515)
Q Consensus       307 ~~l~~~~~~~~i~~~d~~~~~~~~~~~-------~~~~~~i~~~--~~~~~~~~l~~~~~d---g~i~i~d~~~--~---  369 (515)
                      .-+++...+|.+.+|-.+......+..       +.....++..  ++..+|+.+++++.+   +.|++|.+.-  +   
T Consensus        63 ~A~i~Vt~nG~l~l~yQ~~~~~~~~~s~~el~s~~~s~~~ithAsi~~~~~g~~ili~t~s~~s~~l~~yrv~I~W~~~~  142 (753)
T PF11635_consen   63 SACIAVTRNGLLKLWYQKPDGQWNESSTAELESLGSSDDLITHASIAPSDNGKSILIATYSSLSKQLRFYRVQIDWNAKP  142 (753)
T ss_pred             eEEEEEecCCeEEEEEEcCCCccceeehhhhccccccccceeeceeeecCCCCEEEEEEccccCCceEEEEEEEeccCcC
Confidence            446667788999998774332222222       1122445544  444677666655554   7788875421  1   


Q ss_pred             ----e---eeeec--------c--C-----------CCCCeeEEEECC-------CCcEEEEEeC----CCcEEEEeCCC
Q psy17610        370 ----V---PCFVG--------I--G-----------HAASITKIKISP-------DKKVIVSVSA----DGGIFLWTFPE  410 (515)
Q Consensus       370 ----~---~~~~~--------~--~-----------~~~~i~~~~~~~-------~~~~l~~~~~----dg~i~iw~~~~  410 (515)
                          .   +...+        .  .           .-..++.+.|-+       ....+++.+.    ...|.-|.+..
T Consensus       143 ~~~d~q~~PSl~l~~~~~~~~~~~~~~~~~~~~~~~~~~~LthL~ils~~~~~~~~p~Ili~~~~~~~~~SiI~RweL~~  222 (753)
T PF11635_consen  143 QQIDPQKLPSLFLSHIADETPKDVDPTGWGDPSPDNSMYQLTHLEILSPTPDKDSAPEILIVYSSPNTPSSIIERWELRE  222 (753)
T ss_pred             ccCCCCcCCeEEEEeccccccccccCccccccCcccccccceeEEEeccCCCCCCCCeEEEEEEcCCCCCcEEEEEEEEc
Confidence                0   00000        0  0           112556666654       1234444443    33689999877


Q ss_pred             CcCccCCCcccce-eeeccccc-----ccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeee----c
Q psy17610        411 LEDDVGDSRSLSS-KISRSTAR-----STRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSL----E  480 (515)
Q Consensus       411 ~~~~~~~~~~~~~-~~~~~~~~-----~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~----~  480 (515)
                      ............. ........     -........+..|.++....-+.+++..-.||+|.++|..+-+.+...    .
T Consensus       223 ~~~~lh~~F~ql~s~~~~~~~~~~~~~l~~~~~i~~~~~V~si~~~~~~~~v~~~~~DGsI~~~dr~t~~~~~~~~~~~~  302 (753)
T PF11635_consen  223 EQQPLHPAFQQLGSKKNSSSEPPPTYRLRRLDDITLNKRVVSITSPELDIVVAFAFSDGSIEFRDRNTMKELNETRTNGE  302 (753)
T ss_pred             cCcccchhhhhcCCCCcCCCCCCCceeEEEecccccCCeEEEEEecccCcEEEEEEcCCeEEEEecCcchhhcccccccC
Confidence            6532222111111 00000000     011112234467888888888899999999999999998877555444    1


Q ss_pred             cc--------------ccceEEEEEEcCCCcEEEEeecCCeEE
Q psy17610        481 GS--------------DVAAVNCVDFVDDGKYFLTGGADQIVK  509 (515)
Q Consensus       481 ~~--------------~~~~v~~~~~s~~~~~l~s~~~dg~v~  509 (515)
                      ..              ...++..++|||.+..++.-..||.+.
T Consensus       303 ~~~~v~s~~~~Gf~fp~~~~~~~vafSPt~c~~v~~~~~~~~~  345 (753)
T PF11635_consen  303 PPNTVTSLFQAGFHFPCIQPPLHVAFSPTMCSLVQIDEDGKTK  345 (753)
T ss_pred             CccccccccccccccccCCCCceEEECcccceEEEEecCCCce
Confidence            10              002333578999999999999999865

It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.

>COG4257 Vgb Streptogramin lyase [Defense mechanisms]

Probab=94.81  E-value=2.3  Score=36.30  Aligned_cols=229  Identities=10%  Similarity=0.056  Sum_probs=143.1

Q ss_pred             EEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCce-eeEEe
Q psy17610        170 ACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQ-SLQCV  248 (515)
Q Consensus       170 ~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~-~~~~~  248 (515)
                      ..++-.|||..-+++...+.|--.|..+|+....- .+.......+..-|||..-++-+.. .|.-.|-++... .....
T Consensus        65 ~dvapapdG~VWft~qg~gaiGhLdP~tGev~~yp-Lg~Ga~Phgiv~gpdg~~Witd~~~-aI~R~dpkt~evt~f~lp  142 (353)
T COG4257          65 FDVAPAPDGAVWFTAQGTGAIGHLDPATGEVETYP-LGSGASPHGIVVGPDGSAWITDTGL-AIGRLDPKTLEVTRFPLP  142 (353)
T ss_pred             cccccCCCCceEEecCccccceecCCCCCceEEEe-cCCCCCCceEEECCCCCeeEecCcc-eeEEecCcccceEEeecc
Confidence            45677888888888888888888899999876544 4666667788888988766654433 344444422211 11112


Q ss_pred             eccccCceEEEEEecCCCEEEEEeCC---------CcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEE
Q psy17610        249 LKEHTSSVSVIQIKSDSKEAMSASTD---------GTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMID  319 (515)
Q Consensus       249 ~~~~~~~v~~~~~~~~~~~l~~~~~d---------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~  319 (515)
                      .+.-........|.+.|++-+++...         +.|++|+..         .....+.++..|+|...++...+..|-
T Consensus       143 ~~~a~~nlet~vfD~~G~lWFt~q~G~yGrLdPa~~~i~vfpaP---------qG~gpyGi~atpdGsvwyaslagnaia  213 (353)
T COG4257         143 LEHADANLETAVFDPWGNLWFTGQIGAYGRLDPARNVISVFPAP---------QGGGPYGICATPDGSVWYASLAGNAIA  213 (353)
T ss_pred             cccCCCcccceeeCCCccEEEeeccccceecCcccCceeeeccC---------CCCCCcceEECCCCcEEEEeccccceE
Confidence            23334567778899999887776531         233444332         223567889999999999888888888


Q ss_pred             EEeCCCCceEEEEecCC--CccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCe-eeeeccCCCCCeeEEEECCCCcEEEE
Q psy17610        320 YWETCDGSIIRSLEGSD--VAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGV-PCFVGIGHAASITKIKISPDKKVIVS  396 (515)
Q Consensus       320 ~~d~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~  396 (515)
                      ..|..++.. ..+..+.  ....+.+--+|.|+.-++-...+.+..||..... ....+.+....-.++.....++.-.+
T Consensus       214 ridp~~~~a-ev~p~P~~~~~gsRriwsdpig~~wittwg~g~l~rfdPs~~sW~eypLPgs~arpys~rVD~~grVW~s  292 (353)
T COG4257         214 RIDPFAGHA-EVVPQPNALKAGSRRIWSDPIGRAWITTWGTGSLHRFDPSVTSWIEYPLPGSKARPYSMRVDRHGRVWLS  292 (353)
T ss_pred             EcccccCCc-ceecCCCcccccccccccCccCcEEEeccCCceeeEeCcccccceeeeCCCCCCCcceeeeccCCcEEee
Confidence            888877632 2222221  1344556667788877777777888888875532 12234444555566666655554444


Q ss_pred             EeCCCcEEEEeCCC
Q psy17610        397 VSADGGIFLWTFPE  410 (515)
Q Consensus       397 ~~~dg~i~iw~~~~  410 (515)
                      --..|.|.-+|-++
T Consensus       293 ea~agai~rfdpet  306 (353)
T COG4257         293 EADAGAIGRFDPET  306 (353)
T ss_pred             ccccCceeecCccc
Confidence            33445555555443

>PLN00033 photosystem II stability/assembly factor; Provisional

Probab=94.78  E-value=3.5  Score=38.38  Aligned_cols=148  Identities=9%  Similarity=0.083  Sum_probs=80.2

Q ss_pred             EEEEEEcCCCcEEEEEECCCeEEEEeCCCCceE-EEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCe-----
Q psy17610        297 IMSAAYHPSEVQLITCSTNKMIDYWETCDGSII-RSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGV-----  370 (515)
Q Consensus       297 ~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-----  370 (515)
                      ...+...+++.+++++.....++-||  .+... ..........+..+.+.+++.+++++ ..|.+.. ....++     
T Consensus       241 f~~v~~~~dG~~~~vg~~G~~~~s~d--~G~~~W~~~~~~~~~~l~~v~~~~dg~l~l~g-~~G~l~~-S~d~G~~~~~~  316 (398)
T PLN00033        241 FSTVNRSPDGDYVAVSSRGNFYLTWE--PGQPYWQPHNRASARRIQNMGWRADGGLWLLT-RGGGLYV-SKGTGLTEEDF  316 (398)
T ss_pred             eeeEEEcCCCCEEEEECCccEEEecC--CCCcceEEecCCCccceeeeeEcCCCCEEEEe-CCceEEE-ecCCCCccccc
Confidence            34456677877777665554344444  23221 22333334678899999999887766 4555433 333332     


Q ss_pred             eeeeccC--CCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEee
Q psy17610        371 PCFVGIG--HAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAA  448 (515)
Q Consensus       371 ~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  448 (515)
                      .......  ....+.++.|.+++..+++| ..|.+.... ..++. -....                .....+..+..+.
T Consensus       317 ~f~~~~~~~~~~~l~~v~~~~d~~~~a~G-~~G~v~~s~-D~G~t-W~~~~----------------~~~~~~~~ly~v~  377 (398)
T PLN00033        317 DFEEADIKSRGFGILDVGYRSKKEAWAAG-GSGILLRST-DGGKS-WKRDK----------------GADNIAANLYSVK  377 (398)
T ss_pred             ceeecccCCCCcceEEEEEcCCCcEEEEE-CCCcEEEeC-CCCcc-eeEcc----------------ccCCCCcceeEEE
Confidence            2222221  22358899999888765554 777665543 22110 00000                0011123467888


Q ss_pred             eccCCcEEEEeecCCeEEEE
Q psy17610        449 YHPSEVQLITCSTNKMIDYW  468 (515)
Q Consensus       449 ~s~~~~~l~~~~~dg~v~iw  468 (515)
                      |.++++-+++| .+|.|.-|
T Consensus       378 f~~~~~g~~~G-~~G~il~~  396 (398)
T PLN00033        378 FFDDKKGFVLG-NDGVLLRY  396 (398)
T ss_pred             EcCCCceEEEe-CCcEEEEe
Confidence            88877766665 47766544

>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal

Probab=94.77  E-value=1.3  Score=33.25  Aligned_cols=118  Identities=9%  Similarity=0.044  Sum_probs=74.0

Q ss_pred             EEEEEecCCCEEEEEecCceEEEEECCCCce-------eEEeeccCccCeEEEEeCC----CCcEEEEEecCCcEEEEeC
Q psy17610         85 SSLQYNPVNNKVFVGTVNCEIFLIDMNSGFT-------LTLVNTCHTSAIYDLQFPV----NFSSVFATCSKNDIRIWSV  153 (515)
Q Consensus        85 ~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~-------~~~~~~~h~~~v~~~~~~~----~~~~l~~~~~d~~i~iw~~  153 (515)
                      ..-.|......|++++..|+|.|.+......       ....+. -...|++++-.+    ++.-++..++...+..||+
T Consensus         2 aiGkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LN-in~~italaaG~l~~~~~~D~LliGt~t~llaYDV   80 (136)
T PF14781_consen    2 AIGKFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLN-INQEITALAAGRLKPDDGRDCLLIGTQTSLLAYDV   80 (136)
T ss_pred             eEEEeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEE-CCCceEEEEEEecCCCCCcCEEEEeccceEEEEEc
Confidence            3445677777899999999999998764211       122232 445677776433    3455666666788999999


Q ss_pred             CCCceeEEEEecCeEEEEEEEee---CCCEEEEEeCCCeEEEEecCCCceEEEe
Q psy17610        154 RTLNELLRISVMNMICACIVFTY---DGKAILSGWNDGFIRCFTPQSGKLKFII  204 (515)
Q Consensus       154 ~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~~~~~~~~~~~~~~  204 (515)
                      +....+..-. -.+.+.++.+-.   ...-++..+.+..|.-||.+..+.....
T Consensus        81 ~~N~d~Fyke-~~DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~G~e~fWtV  133 (136)
T PF14781_consen   81 ENNSDLFYKE-VPDGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDYEGNEIFWTV  133 (136)
T ss_pred             ccCchhhhhh-CccceeEEEEEecCCCCCcEEEECceEEEEEeCCCCcEEEEEe
Confidence            8776554322 335566666633   2234555556777888887766655543

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=94.76  E-value=2  Score=42.59  Aligned_cols=106  Identities=8%  Similarity=0.177  Sum_probs=69.1

Q ss_pred             CCCEEEEEeCCCeEEEEecCC-------C----ce---E----EEecCCCCCCeEEEEEc--CCCCEEEEecCCCcEEEE
Q psy17610        177 DGKAILSGWNDGFIRCFTPQS-------G----KL---K----FIIPNAHNRGVTALAIT--QDGTRLLSGGGEGQVRIW  236 (515)
Q Consensus       177 ~~~~l~~~~~dg~i~~~~~~~-------~----~~---~----~~~~~~~~~~v~~~~~~--~~~~~l~~~~~d~~i~iw  236 (515)
                      +...|+.+.+||.|.+|..++       .    +.   .    ..+.......+..++++  ...++||+++....|.||
T Consensus       113 ~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVF  192 (717)
T PF08728_consen  113 GEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYKKSRLIAVSSNSQEVTVF  192 (717)
T ss_pred             CeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecCcceEEEEecCCceEEEE
Confidence            456788888889999885421       0    00   0    00111234568889998  778888988888889988


Q ss_pred             EccCCceee-EEeeccccCceEEEEEecCC---C---EEEEEeCCCcEEEEEc
Q psy17610        237 KLTRESQSL-QCVLKEHTSSVSVIQIKSDS---K---EAMSASTDGTCVLWDL  282 (515)
Q Consensus       237 ~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~---~---~l~~~~~d~~i~iwd~  282 (515)
                      -......+. ...-..+...|.+++|-++.   .   .+++++-.|.+.+|++
T Consensus       193 af~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I  245 (717)
T PF08728_consen  193 AFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI  245 (717)
T ss_pred             EEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence            765321111 11112356678899997643   2   6778888999999887

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=94.70  E-value=2  Score=35.30  Aligned_cols=159  Identities=11%  Similarity=0.048  Sum_probs=84.1

Q ss_pred             CEEEEEcCCCeEEEEEcc--CCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCC------cEEEE---eCCCCcCccCCC
Q psy17610        350 KYFLTGGADQIVKMWMYR--EGVPCFVGIGHAASITKIKISPDKKVIVSVSADG------GIFLW---TFPELEDDVGDS  418 (515)
Q Consensus       350 ~~l~~~~~dg~i~i~d~~--~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg------~i~iw---~~~~~~~~~~~~  418 (515)
                      ..|+.+.....|.+|++.  ..++...+..- +.|..+.++..|++|+|--.+.      .+++|   +....+......
T Consensus        29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv-~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~~~~~v~v  107 (215)
T PF14761_consen   29 DALFVAASGCKVEVYDLEQEECPLLCTFSTV-GRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQKEENSPVRV  107 (215)
T ss_pred             ceEEEEcCCCEEEEEEcccCCCceeEEEcch-hheeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhcccCCcEEE
Confidence            455554667789999987  33555566444 7899999999999999974432      45554   332111110000


Q ss_pred             c----ccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCee-ee-----eec----ccc-
Q psy17610        419 R----SLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSI-IR-----SLE----GSD-  483 (515)
Q Consensus       419 ~----~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~-~~-----~~~----~~~-  483 (515)
                      +    ................+.......+.+++..|-..-|+.|+ ++.+.+|.+..... ..     .++    .|+ 
T Consensus       108 RiaG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~LlVg~-~~~l~lf~l~~~~~~~~~~~~lDFe~~l~~~~~  186 (215)
T PF14761_consen  108 RIAGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGNLLVGC-GNKLVLFTLKYQTIQSEKFSFLDFERSLIDHID  186 (215)
T ss_pred             EEcccccccCCCCccccceEEEEecCCCCCCEEEecCCCCCEEEEc-CCEEEEEEEEEEEEecccccEEechhhhhheec
Confidence            0    00000000001111112222345677788777655666666 55688998765433 11     111    111 


Q ss_pred             cceEEEEEEcCCCcEEEEeecCCeEEEEEE
Q psy17610        484 VAAVNCVDFVDDGKYFLTGGADQIVKICLY  513 (515)
Q Consensus       484 ~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~  513 (515)
                      .-....++|.  +.|+|..++. -+++..+
T Consensus       187 ~~~p~~v~ic--~~yiA~~s~~-ev~Vlkl  213 (215)
T PF14761_consen  187 NFKPTQVAIC--EGYIAVMSDL-EVLVLKL  213 (215)
T ss_pred             CceEEEEEEE--eeEEEEecCC-EEEEEEE
Confidence            1234556664  5677776644 4776654

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=94.68  E-value=1.1  Score=41.57  Aligned_cols=144  Identities=13%  Similarity=0.106  Sum_probs=92.4

Q ss_pred             CCCEEE-EEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCc-------EEEEEECCCeEEEEeCCC-CceEEEEec
Q psy17610        264 DSKEAM-SASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEV-------QLITCSTNKMIDYWETCD-GSIIRSLEG  334 (515)
Q Consensus       264 ~~~~l~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-------~l~~~~~~~~i~~~d~~~-~~~~~~~~~  334 (515)
                      +..+++ .+.....++-.|++.++.+........+ -+.|.|..+       .-++|-.+..|.-.|.+- +..+.....
T Consensus       478 dssli~~dg~~~~kLykmDIErGkvveeW~~~ddv-vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~v~es  556 (776)
T COG5167         478 DSSLIYLDGGERDKLYKMDIERGKVVEEWDLKDDV-VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIKVVES  556 (776)
T ss_pred             CcceEEecCCCcccceeeecccceeeeEeecCCcc-eeecCCchhHHhcCccceEEeecccceEEecccccCCceeeeee
Confidence            444444 3455567888899999999888887776 677777532       233455555555556543 322222221


Q ss_pred             C---CCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCC
Q psy17610        335 S---DVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPE  410 (515)
Q Consensus       335 ~---~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~  410 (515)
                      .   ......+..-. ...++|+++..|.|++||.-.-.....+++-...|..+..+.+|+++++.+.. .+.+-|++-
T Consensus       557 KdY~tKn~Fss~~tT-esGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk~-yllL~d~~i  633 (776)
T COG5167         557 KDYKTKNKFSSGMTT-ESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCKN-YLLLTDVPI  633 (776)
T ss_pred             hhccccccccccccc-cCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeecc-eEEEEeccc
Confidence            1   11223333333 34589999999999999975444445567778889999999999988766554 677777754

>COG5290 IkappaB kinase complex, IKAP component [Transcription]

Probab=94.50  E-value=4.2  Score=40.24  Aligned_cols=90  Identities=10%  Similarity=0.158  Sum_probs=47.1

Q ss_pred             EEEEEecCCCEEEEEeCCC-----cEEEEEcc---cceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCce
Q psy17610        257 SVIQIKSDSKEAMSASTDG-----TCVLWDLI---KSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSI  328 (515)
Q Consensus       257 ~~~~~~~~~~~l~~~~~d~-----~i~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~  328 (515)
                      ..+.|-|+|..+++-..||     .|..+..+   -|+.-............+|+.....++.+ ....+.+|-..+-.-
T Consensus       250 ~~LSWkpqgS~~ati~td~~~~S~~ViFfErNGLrHGef~lr~~~dEk~~~~~wn~~s~vlav~-~~n~~~lwttkNyhW  328 (1243)
T COG5290         250 HQLSWKPQGSKYATIGTDGCSTSESVIFFERNGLRHGEFDLRVGCDEKAFLENWNLLSTVLAVA-EGNLLKLWTTKNYHW  328 (1243)
T ss_pred             hccccccCCceeeeeccCCCCCcceEEEEccCCcccCCccccCCchhhhhhhhhhHHHHHHHHh-hcceEEEEEccceEE
Confidence            4588999999999877654     34444422   11111112222334555555544433332 455788887655433


Q ss_pred             EEEEecCCCccEEEEEEcCC
Q psy17610        329 IRSLEGSDVAAVNCVDFVDD  348 (515)
Q Consensus       329 ~~~~~~~~~~~i~~~~~~~~  348 (515)
                      .......- ..+.-+.|+|.
T Consensus       329 YLK~e~~i-p~~s~vkwhpe  347 (1243)
T COG5290         329 YLKVERQI-PGISYVKWHPE  347 (1243)
T ss_pred             EEEEeecC-CCcceeeeccc
Confidence            22222221 34556778874

>KOG1916|consensus

Probab=94.49  E-value=0.15  Score=50.35  Aligned_cols=132  Identities=11%  Similarity=0.111  Sum_probs=72.1

Q ss_pred             CCcEEEEeCCCCce-eEEEEecCeEEEEEEEee-CCCEEEEEeCCCeEEEEecC--CCceEE----EecCCCCCCeEEEE
Q psy17610        145 KNDIRIWSVRTLNE-LLRISVMNMICACIVFTY-DGKAILSGWNDGFIRCFTPQ--SGKLKF----IIPNAHNRGVTALA  216 (515)
Q Consensus       145 d~~i~iw~~~~~~~-~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~~~~~--~~~~~~----~~~~~~~~~v~~~~  216 (515)
                      .+.+++-|..+.-. -.-+++..+.+..+.|.. +...+.  ..-|.+.+|+++  .|+...    +........+.-+.
T Consensus       110 ~~~vrvaN~~~sm~~~~l~kgf~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~  187 (1283)
T KOG1916|consen  110 ENGVRVANQEPSMRHNELAKGFPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVS  187 (1283)
T ss_pred             hhhhhhccCcchhHHHHHHhcCCCCcccccccccCChHHH--HHhhhhheeehHhhccccccceEEeecCcCCCCcceee
Confidence            45566666543221 112334555566666632 222222  334678888765  344322    22233444556666


Q ss_pred             EcC---CCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEE-----------ecCCCEEEEEeCCCcEEEEE
Q psy17610        217 ITQ---DGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQI-----------KSDSKEAMSASTDGTCVLWD  281 (515)
Q Consensus       217 ~~~---~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~-----------~~~~~~l~~~~~d~~i~iwd  281 (515)
                      |.|   +..++..+-.++.+++.++++...   ..+.+|...+..+++           +|||+.++.++.||.++.|.
T Consensus       188 wcp~~~~~~~ic~~~~~~~i~lL~~~ra~~---~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Q  263 (1283)
T KOG1916|consen  188 WCPIAVNKVYICYGLKGGEIRLLNINRALR---SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQ  263 (1283)
T ss_pred             ecccccccceeeeccCCCceeEeeechHHH---HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceee
Confidence            766   556777788889999888754332   334557776666554           45555555555555555554

>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]

Probab=94.48  E-value=2.2  Score=34.70  Aligned_cols=173  Identities=14%  Similarity=0.125  Sum_probs=100.4

Q ss_pred             CCCEEEEecC--CCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEE-EEeCCCcEEEEEcccceEEEEEEcCcc
Q psy17610        220 DGTRLLSGGG--EGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAM-SASTDGTCVLWDLIKSTRLIIMILPSM  296 (515)
Q Consensus       220 ~~~~l~~~~~--d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~iwd~~~~~~~~~~~~~~~  296 (515)
                      +|.++.+.+.  ...|++||++..+......+..  ..+..=-...-+..+. ..=.+|.-..+|.++.+.+..+..++.
T Consensus        55 ~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~--~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg~~~y~Ge  132 (262)
T COG3823          55 DGHILESTGLYGFSKIRVSDLTTGQEIFSEKLAP--DTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELGRFSYEGE  132 (262)
T ss_pred             CCEEEEeccccccceeEEEeccCceEEEEeecCC--ccccccceeeccceEEEEEeccceeEEEChHHhhhhcccccCCc
Confidence            4455555543  3479999997554444433331  1111101111123332 334577888999999888888887777


Q ss_pred             EEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEe----cCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeee
Q psy17610        297 IMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLE----GSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPC  372 (515)
Q Consensus       297 ~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~  372 (515)
                      -..++  .++..++.+.....++.-|.++-....++.    +..-..++.+.|- +|...|-.-.+..|...+.++|+.+
T Consensus       133 GWgLt--~d~~~LimsdGsatL~frdP~tfa~~~~v~VT~~g~pv~~LNELE~V-dG~lyANVw~t~~I~rI~p~sGrV~  209 (262)
T COG3823         133 GWGLT--SDDKNLIMSDGSATLQFRDPKTFAELDTVQVTDDGVPVSKLNELEWV-DGELYANVWQTTRIARIDPDSGRVV  209 (262)
T ss_pred             ceeee--cCCcceEeeCCceEEEecCHHHhhhcceEEEEECCeecccccceeee-ccEEEEeeeeecceEEEcCCCCcEE
Confidence            66665  455668887777788888877654443332    2222334444553 4666665555556666666666655


Q ss_pred             eec------------cCCCCCeeEEEECCCC-cEEEEE
Q psy17610        373 FVG------------IGHAASITKIKISPDK-KVIVSV  397 (515)
Q Consensus       373 ~~~------------~~~~~~i~~~~~~~~~-~~l~~~  397 (515)
                      ..+            ..|..-.+.+++.|++ +++++|
T Consensus       210 ~widlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iTG  247 (262)
T COG3823         210 AWIDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLITG  247 (262)
T ss_pred             EEEEccCCchhcCccccccccccceeecCcCCeEEEec
Confidence            433            2345567889999977 455554

>KOG3616|consensus

Probab=94.46  E-value=4  Score=40.08  Aligned_cols=68  Identities=19%  Similarity=0.263  Sum_probs=45.1

Q ss_pred             eEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEc
Q psy17610        167 MICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKL  238 (515)
Q Consensus       167 ~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~  238 (515)
                      ..++++.-+|.++.++.+..||.|++|+....+.....  ....+-..+.|...|  |++...|..+.-|.-
T Consensus        15 e~~~aiqshp~~~s~v~~~~d~si~lfn~~~r~qski~--~~~~p~~nlv~tnhg--l~~~tsdrr~la~~~   82 (1636)
T KOG3616|consen   15 EFTTAIQSHPGGQSFVLAHQDGSIILFNFIPRRQSKIC--EEAKPKENLVFTNHG--LVTATSDRRALAWKE   82 (1636)
T ss_pred             ceeeeeeecCCCceEEEEecCCcEEEEeecccchhhhh--hhcCCccceeeeccc--eEEEeccchhheeec
Confidence            34677888899999999999999999997655442211  112233445565554  556666677777754

>KOG1983|consensus

Probab=94.42  E-value=2.5  Score=44.51  Aligned_cols=232  Identities=11%  Similarity=0.124  Sum_probs=102.2

Q ss_pred             CCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeecc-CccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCcee
Q psy17610         81 DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTC-HTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNEL  159 (515)
Q Consensus        81 ~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~  159 (515)
                      ......++|+|...++|.++..|.|.++-...- +....... -...+..+.+-.......+-..+..+.+|.......+
T Consensus        35 ~~~~~~~afD~~q~llai~t~tg~i~~yg~~~v-e~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~  113 (993)
T KOG1983|consen   35 PSTPSALAFDPTQGLLAIGTRTGAIKIYGQPGV-EFVGLHPKQNQINVTRIELLVGISRNLVLSDDDSLHLWSIKIKTGV  113 (993)
T ss_pred             CCCCcceeeccccceEEEEEecccEEEecccce-EEEeccccccchhhhheeeeecccccceeecccceeeeccccccee
Confidence            456788999999999999999999999987652 22111110 0012222222222223334444555666654432211


Q ss_pred             EEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEE-EEcCCCCEEEEecCCCcEEEEEc
Q psy17610        160 LRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTAL-AITQDGTRLLSGGGEGQVRIWKL  238 (515)
Q Consensus       160 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~l~~~~~d~~i~iw~~  238 (515)
                      .    ....+++....+--.. +.+ ..+.+++|+..-.........+-...-... ...+..-.+.---.+-.-.++.+
T Consensus       114 ~----~~~~~~~~~~~~~~~~-~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~  187 (993)
T KOG1983|consen  114 F----LKQEITSFVTDPPPDW-LIG-ENGLVKVSDVLRHQLSDLKYAGTESSNFVPYESLSPTLSIEGLVIDLDTVLISL  187 (993)
T ss_pred             e----cCCcceeccCCCCcch-hcc-cCceeeEeeechhhhccceeccccccccceeeeeccceeeeccccccccceeec
Confidence            1    1222222222222223 444 777788777653322111100110000000 00000000000000001111111


Q ss_pred             cCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeE
Q psy17610        239 TRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMI  318 (515)
Q Consensus       239 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i  318 (515)
                      .   ... ..+.-+..++.+..+...... +.+...+.+..|+.........+.......    .+++..++++..||.+
T Consensus       188 ~---~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~v~~h~Dgs~  258 (993)
T KOG1983|consen  188 P---DAY-LGLSLIEYESLQVLYYSPTKI-LIGFNRGLVVIKDRASKYVQSAYLPNGQLE----SRDGSHFVSYHTDGSY  258 (993)
T ss_pred             c---ccc-ccccccccccceeeeecCCCc-ceeeeeeeeeehhcccccchhhcccccccC----ccCCceEEEEEecCCE
Confidence            0   000 122223444444444333332 333344556666544333333322222111    6778888888888888


Q ss_pred             EEEeCCCCce
Q psy17610        319 DYWETCDGSI  328 (515)
Q Consensus       319 ~~~d~~~~~~  328 (515)
                      .+||...++.
T Consensus       259 ~fWd~s~g~~  268 (993)
T KOG1983|consen  259 AFWDVSSGKL  268 (993)
T ss_pred             EeeecCCCce
Confidence            8888887754

>KOG2247|consensus

Probab=94.23  E-value=0.0053  Score=55.57  Aligned_cols=148  Identities=13%  Similarity=0.196  Sum_probs=102.2

Q ss_pred             CcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec-CCcEEEEeCCCCceeE
Q psy17610         82 SGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS-KNDIRIWSVRTLNELL  160 (515)
Q Consensus        82 ~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~~~  160 (515)
                      .......|-|.+.-++.++.+..+..||-.. +.....  ..++....++|..++..++.... .+.+.+||+.+... .
T Consensus        35 v~pi~~~w~~e~~nlavaca~tiv~~YD~ag-q~~le~--n~tg~aldm~wDkegdvlavlAek~~piylwd~n~eyt-q  110 (615)
T KOG2247|consen   35 VGPIIHRWRPEGHNLAVACANTIVIYYDKAG-QVILEL--NPTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYT-Q  110 (615)
T ss_pred             cccceeeEecCCCceehhhhhhHHHhhhhhc-ceeccc--CCchhHhhhhhccccchhhhhhhcCCCeeechhhhhhH-H
Confidence            3334556777776689998898999999765 222221  14556678889888877666655 78899999976432 1


Q ss_pred             EEE-ecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEE
Q psy17610        161 RIS-VMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRI  235 (515)
Q Consensus       161 ~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i  235 (515)
                      ++. +....-.-+.|++....++.+...|.+.+++..+.+..... ..|...++++++.+.+. .+.++.|..+.+
T Consensus       111 qLE~gg~~s~sll~wsKg~~el~ig~~~gn~viynhgtsR~iiv~-Gkh~RRgtq~av~lEd~-vil~dcd~~L~v  184 (615)
T KOG2247|consen  111 QLESGGTSSKSLLAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVM-GKHQRRGTQIAVTLEDY-VILCDCDNTLSV  184 (615)
T ss_pred             HHhccCcchHHHHhhccCCccccccccccceEEEeccchhhhhhh-cccccceeEEEecccce-eeecCcHHHHHH
Confidence            221 12222233789999999999999999999998887766554 34999999999999774 455555554443

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=94.10  E-value=2.8  Score=34.50  Aligned_cols=102  Identities=17%  Similarity=0.247  Sum_probs=63.9

Q ss_pred             cEEEEEecCCcEEEEeCCC--CceeEEEEecCeEEEEEEEeeCCCEEEEEeCC---C---eEEEE---ecC--CCceEE-
Q psy17610        137 SSVFATCSKNDIRIWSVRT--LNELLRISVMNMICACIVFTYDGKAILSGWND---G---FIRCF---TPQ--SGKLKF-  202 (515)
Q Consensus       137 ~~l~~~~~d~~i~iw~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g---~i~~~---~~~--~~~~~~-  202 (515)
                      +.|+.+.....|.+|++..  .+.+.++..- +.|..+.++..|++|++--.+   .   .+++|   ...  ...++. 
T Consensus        29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv-~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~~~~~v~v  107 (215)
T PF14761_consen   29 DALFVAASGCKVEVYDLEQEECPLLCTFSTV-GRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQKEENSPVRV  107 (215)
T ss_pred             ceEEEEcCCCEEEEEEcccCCCceeEEEcch-hheeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhcccCCcEEE
Confidence            3666667788899999983  3344555543 678899999999999986543   2   55664   211  111111 


Q ss_pred             --------------------EecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccC
Q psy17610        203 --------------------IIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTR  240 (515)
Q Consensus       203 --------------------~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~  240 (515)
                                          .+..+-..++.+++..|-..-|+.|+. +.+.+|.+..
T Consensus       108 RiaG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~LlVg~~-~~l~lf~l~~  164 (215)
T PF14761_consen  108 RIAGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGNLLVGCG-NKLVLFTLKY  164 (215)
T ss_pred             EEcccccccCCCCccccceEEEEecCCCCCCEEEecCCCCCEEEEcC-CEEEEEEEEE
Confidence                                111233456788888884334555655 5799998753

>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein

Probab=93.97  E-value=4.7  Score=36.61  Aligned_cols=70  Identities=13%  Similarity=0.121  Sum_probs=37.5

Q ss_pred             CCCEEEEEeC-----CCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCC----cEEEEEccCCceeeE
Q psy17610        177 DGKAILSGWN-----DGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEG----QVRIWKLTRESQSLQ  246 (515)
Q Consensus       177 ~~~~l~~~~~-----dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~----~i~iw~~~~~~~~~~  246 (515)
                      +++..+.|+.     ...+..||+.+.+....-...........+...+++..+.|+.++    .+..||..+.+....
T Consensus       123 ~~~iYv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~~yd~~~~~W~~~  201 (323)
T TIGR03548       123 DGTLYVGGGNRNGKPSNKSYLFNLETQEWFELPDFPGEPRVQPVCVKLQNELYVFGGGSNIAYTDGYKYSPKKNQWQKV  201 (323)
T ss_pred             CCEEEEEeCcCCCccCceEEEEcCCCCCeeECCCCCCCCCCcceEEEECCEEEEEcCCCCccccceEEEecCCCeeEEC
Confidence            5555666653     246888998877654322111111222222233566777777653    356788866555433

Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.

>KOG1898|consensus

Probab=93.92  E-value=8.8  Score=39.54  Aligned_cols=101  Identities=14%  Similarity=0.206  Sum_probs=58.5

Q ss_pred             EEEEEecCCcEEEEeCCCCceeEEEE---ecCeEEEEEEEeeCC------CEEEEEeCCCeEEEEecCCCceEEEec-CC
Q psy17610        138 SVFATCSKNDIRIWSVRTLNELLRIS---VMNMICACIVFTYDG------KAILSGWNDGFIRCFTPQSGKLKFIIP-NA  207 (515)
Q Consensus       138 ~l~~~~~d~~i~iw~~~~~~~~~~~~---~~~~~v~~~~~~~~~------~~l~~~~~dg~i~~~~~~~~~~~~~~~-~~  207 (515)
                      .++.+-+.+.+..+.......+..+.   .-+..+.|+++.++.      ++++.++.|+.++++.+.....+..+. .+
T Consensus       551 qiVvalSngelvyfe~d~sgql~E~~er~tl~~~vac~ai~~~~~g~krsrfla~a~~d~~vriisL~p~d~l~~ls~q~  630 (1205)
T KOG1898|consen  551 QIVVALSNGELVYFEGDVSGQLNEFTERVTLSTDVACLAIGQDPEGEKRSRFLALASVDNMVRIISLDPSDCLQPLSVQG  630 (1205)
T ss_pred             EEEEEccCCeEEEEEeccCccceeeeeeeeeceeehhhccCCCCcchhhcceeeeeccccceeEEEecCcceEEEccccc
Confidence            34444445555545443333333332   334567888888765      579999999999999888655544431 33


Q ss_pred             CCCCeEEEEEcC---CC------CEEEEecCCCcEEEEEc
Q psy17610        208 HNRGVTALAITQ---DG------TRLLSGGGEGQVRIWKL  238 (515)
Q Consensus       208 ~~~~v~~~~~~~---~~------~~l~~~~~d~~i~iw~~  238 (515)
                      -..++.++.+-+   ++      -+|.+|-.+|.+.-+-+
T Consensus       631 l~~~~~s~~iv~~~~~~~~~~~~L~l~~GL~NGvllR~~i  670 (1205)
T KOG1898|consen  631 LSSPPESLCIVEMEATGGTDVAQLYLLIGLRNGVLLRFVI  670 (1205)
T ss_pred             cCCCccceEEEEecccCCccceeEEEEecccccEEEEEEe
Confidence            344455554433   22      14567777776655533

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=93.87  E-value=0.3  Score=28.06  Aligned_cols=31  Identities=19%  Similarity=0.250  Sum_probs=25.9

Q ss_pred             ccEEEEEEcCCC---CEEEEEcCCCeEEEEEccC
Q psy17610        338 AAVNCVDFVDDG---KYFLTGGADQIVKMWMYRE  368 (515)
Q Consensus       338 ~~i~~~~~~~~~---~~l~~~~~dg~i~i~d~~~  368 (515)
                      +.++++.|+|+.   .+|+..-..|.+.|+|+++
T Consensus         1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~   34 (43)
T PF10313_consen    1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS   34 (43)
T ss_pred             CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence            357899999844   5888888889999999985

It contains a characteristic DLL sequence motif.

>PF13449 Phytase-like: Esterase-like activity of phytase

Probab=93.85  E-value=5  Score=36.46  Aligned_cols=145  Identities=17%  Similarity=0.275  Sum_probs=83.2

Q ss_pred             CCCcEEEEEEecCCCEEEEEecCce------EEEEECCC--C--ceeEE----eeccCcc--------CeEEEEeCCCCc
Q psy17610         80 DDSGISSLQYNPVNNKVFVGTVNCE------IFLIDMNS--G--FTLTL----VNTCHTS--------AIYDLQFPVNFS  137 (515)
Q Consensus        80 ~~~~v~~~~~s~~~~~l~~~~~d~~------i~iw~~~~--~--~~~~~----~~~~h~~--------~v~~~~~~~~~~  137 (515)
                      .-+.++.+.+.|++..+++-+.+|.      +..+++..  +  ..+..    .+..-.+        ...+|++.+++.
T Consensus        18 ~~GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g~   97 (326)
T PF13449_consen   18 PFGGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPDGS   97 (326)
T ss_pred             ccCcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecCCC
Confidence            3477889999976556666666766      66665543  1  01110    1111111        334788877776


Q ss_pred             EEEEEecC------CcEEEEeCCCCceeEEEE---------------ecCeEEEEEEEeeCCCEEEEEeCC-----C--e
Q psy17610        138 SVFATCSK------NDIRIWSVRTLNELLRIS---------------VMNMICACIVFTYDGKAILSGWND-----G--F  189 (515)
Q Consensus       138 ~l~~~~~d------~~i~iw~~~~~~~~~~~~---------------~~~~~v~~~~~~~~~~~l~~~~~d-----g--~  189 (515)
                      .+++.=.+      ..|..++.. |+....+.               ..+....+++++|+|+.|+++.+.     +  .
T Consensus        98 ~~is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E~~l~~d~~~~  176 (326)
T PF13449_consen   98 FWISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAMESPLKQDGPRA  176 (326)
T ss_pred             EEEEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEECccccCCCccc
Confidence            66655556      678888876 66554442               123457899999999977765432     2  1


Q ss_pred             -------EEE--EecCC-CceEE--EecCC------CCCCeEEEEEcCCCCEEE
Q psy17610        190 -------IRC--FTPQS-GKLKF--IIPNA------HNRGVTALAITQDGTRLL  225 (515)
Q Consensus       190 -------i~~--~~~~~-~~~~~--~~~~~------~~~~v~~~~~~~~~~~l~  225 (515)
                             +++  ||..+ ++...  .++..      ....+..+.+.+++++|+
T Consensus       177 ~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLv  230 (326)
T PF13449_consen  177 NPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLV  230 (326)
T ss_pred             ccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEE
Confidence                   344  45544 22221  22111      356678888888887555

>KOG3616|consensus

Probab=93.84  E-value=2.3  Score=41.64  Aligned_cols=70  Identities=13%  Similarity=0.210  Sum_probs=48.6

Q ss_pred             CCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeC
Q psy17610         80 DDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSV  153 (515)
Q Consensus        80 ~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~  153 (515)
                      ...-++++.-+|.|+-++.+..||+|++|+..... ...+.. ...|-..+.|...  -|+++.+|..+.-|.-
T Consensus        13 ~~e~~~aiqshp~~~s~v~~~~d~si~lfn~~~r~-qski~~-~~~p~~nlv~tnh--gl~~~tsdrr~la~~~   82 (1636)
T KOG3616|consen   13 EDEFTTAIQSHPGGQSFVLAHQDGSIILFNFIPRR-QSKICE-EAKPKENLVFTNH--GLVTATSDRRALAWKE   82 (1636)
T ss_pred             ccceeeeeeecCCCceEEEEecCCcEEEEeecccc-hhhhhh-hcCCccceeeecc--ceEEEeccchhheeec
Confidence            34567888889999999999999999999987632 222221 2334455666654  3677777887777763

>KOG2247|consensus

Probab=93.76  E-value=0.0075  Score=54.63  Aligned_cols=141  Identities=9%  Similarity=0.131  Sum_probs=101.0

Q ss_pred             EEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEE-EEECCCeEEEEeCCCCceEEEEecC
Q psy17610        257 SVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLI-TCSTNKMIDYWETCDGSIIRSLEGS  335 (515)
Q Consensus       257 ~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~i~~~d~~~~~~~~~~~~~  335 (515)
                      ....|-+.+.-++.++.+..+..||- .++.......+.....++|..++..++ .+...+.+.+||+.+.....--.+.
T Consensus        38 i~~~w~~e~~nlavaca~tiv~~YD~-agq~~le~n~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytqqLE~gg  116 (615)
T KOG2247|consen   38 IIHRWRPEGHNLAVACANTIVIYYDK-AGQVILELNPTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQLESGG  116 (615)
T ss_pred             ceeeEecCCCceehhhhhhHHHhhhh-hcceecccCCchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHHHhccC
Confidence            34567777777888888888888884 455555566677777888888776554 4566889999998765432211111


Q ss_pred             CCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCC
Q psy17610        336 DVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSAD  400 (515)
Q Consensus       336 ~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d  400 (515)
                      . ..-.-+.|++.+..++.+...|.+.|++..+.+.....-.|...++++++.+.+. .+.++.|
T Consensus       117 ~-~s~sll~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av~lEd~-vil~dcd  179 (615)
T KOG2247|consen  117 T-SSKSLLAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAVTLEDY-VILCDCD  179 (615)
T ss_pred             c-chHHHHhhccCCccccccccccceEEEeccchhhhhhhcccccceeEEEecccce-eeecCcH
Confidence            1 2222378999999999999999999999988777766656999999999998765 4444444

>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal

Probab=93.75  E-value=2.2  Score=32.03  Aligned_cols=111  Identities=13%  Similarity=0.125  Sum_probs=70.0

Q ss_pred             EEecCCCEEEEEeCCCcEEEEEccc--------ceEEEEEEcCccEEEEEEcC----C-CcEEEEEECCCeEEEEeCCCC
Q psy17610        260 QIKSDSKEAMSASTDGTCVLWDLIK--------STRLIIMILPSMIMSAAYHP----S-EVQLITCSTNKMIDYWETCDG  326 (515)
Q Consensus       260 ~~~~~~~~l~~~~~d~~i~iwd~~~--------~~~~~~~~~~~~~~~~~~~~----~-~~~l~~~~~~~~i~~~d~~~~  326 (515)
                      .|......|++++.-|+|.+++...        ...+..+.....+++++-.+    + ...|+.| ....+..||....
T Consensus         5 kfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LNin~~italaaG~l~~~~~~D~LliG-t~t~llaYDV~~N   83 (136)
T PF14781_consen    5 KFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLNINQEITALAAGRLKPDDGRDCLLIG-TQTSLLAYDVENN   83 (136)
T ss_pred             EeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEECCCceEEEEEEecCCCCCcCEEEEe-ccceEEEEEcccC
Confidence            4555555678888888899988753        34556677777788776544    2 3344444 5567889999887


Q ss_pred             ceEEEEecCCCccEEEEEEcC----CCCEEEEEcCCCeEEEEEccCCeeeee
Q psy17610        327 SIIRSLEGSDVAAVNCVDFVD----DGKYFLTGGADQIVKMWMYREGVPCFV  374 (515)
Q Consensus       327 ~~~~~~~~~~~~~i~~~~~~~----~~~~l~~~~~dg~i~i~d~~~~~~~~~  374 (515)
                      ..+..-+.+  ..++++.+-.    ...++++|+ +..|.-||.+..+...+
T Consensus        84 ~d~Fyke~~--DGvn~i~~g~~~~~~~~l~ivGG-ncsi~Gfd~~G~e~fWt  132 (136)
T PF14781_consen   84 SDLFYKEVP--DGVNAIVIGKLGDIPSPLVIVGG-NCSIQGFDYEGNEIFWT  132 (136)
T ss_pred             chhhhhhCc--cceeEEEEEecCCCCCcEEEECc-eEEEEEeCCCCcEEEEE
Confidence            766554444  5666666532    234455554 56777777755554443

>KOG2377|consensus

Probab=93.70  E-value=5.7  Score=36.63  Aligned_cols=119  Identities=10%  Similarity=0.101  Sum_probs=80.0

Q ss_pred             ecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEec---CCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccC
Q psy17610        164 VMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIP---NAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTR  240 (515)
Q Consensus       164 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~  240 (515)
                      ...++|.++.|++|.+.+|+--.+.+|.+++....+......   +.....|....|+.+ ..+|.....| +.+|....
T Consensus        64 ~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s-~e~A~i~~~G-~e~y~v~p  141 (657)
T KOG2377|consen   64 DDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSS-TEIAFITDQG-IEFYQVLP  141 (657)
T ss_pred             cCCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecC-eeEEEEecCC-eEEEEEch
Confidence            355689999999999999999999999999985544432221   223455888999866 4566555444 77777653


Q ss_pred             CceeeEEeeccccCceEEEEEecCCCEEEEEeC--CCcEEEEEcccc
Q psy17610        241 ESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST--DGTCVLWDLIKS  285 (515)
Q Consensus       241 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~iwd~~~~  285 (515)
                       .....+..+.|.-.|....|.++.+.++.++.  .+++.=+-++++
T Consensus       142 -ekrslRlVks~~~nvnWy~yc~et~v~LL~t~~~~n~lnpf~~~~~  187 (657)
T KOG2377|consen  142 -EKRSLRLVKSHNLNVNWYMYCPETAVILLSTTVLENVLNPFHFRAG  187 (657)
T ss_pred             -hhhhhhhhhhcccCccEEEEccccceEeeeccccccccccEEEeec
Confidence             23334456778888999999998876554433  344444444443

>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes

Probab=93.57  E-value=4.2  Score=34.69  Aligned_cols=150  Identities=11%  Similarity=0.145  Sum_probs=77.3

Q ss_pred             EEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCC---CeEEEEEccCC--e-eeeec---cCCCCCeeEEEEC
Q psy17610        318 IDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGAD---QIVKMWMYREG--V-PCFVG---IGHAASITKIKIS  388 (515)
Q Consensus       318 i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---g~i~i~d~~~~--~-~~~~~---~~~~~~i~~~~~~  388 (515)
                      -.+||+.+++.. .+......-...-.+-+||+++.+|+..   ..+++++....  . .....   ......--....-
T Consensus        48 s~~yD~~tn~~r-pl~v~td~FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~~~RWYpT~~~L  126 (243)
T PF07250_consen   48 SVEYDPNTNTFR-PLTVQTDTFCSGGAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQSGRWYPTATTL  126 (243)
T ss_pred             EEEEecCCCcEE-eccCCCCCcccCcCCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceECcccccCCCccccceEC
Confidence            457888877543 3333332334445678899999998752   34777775430  0 01110   1112223344556


Q ss_pred             CCCcEEEEEeCCCc-EEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEE
Q psy17610        389 PDKKVIVSVSADGG-IFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDY  467 (515)
Q Consensus       389 ~~~~~l~~~~~dg~-i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~i  467 (515)
                      |||+.|+.|+.... ..+|.-.....     ..........    .  ........--.+...|+|+.++.+..+.  .|
T Consensus       127 ~DG~vlIvGG~~~~t~E~~P~~~~~~-----~~~~~~~l~~----~--~~~~~~nlYP~~~llPdG~lFi~an~~s--~i  193 (243)
T PF07250_consen  127 PDGRVLIVGGSNNPTYEFWPPKGPGP-----GPVTLPFLSQ----T--SDTLPNNLYPFVHLLPDGNLFIFANRGS--II  193 (243)
T ss_pred             CCCCEEEEeCcCCCcccccCCccCCC-----Cceeeecchh----h--hccCccccCceEEEcCCCCEEEEEcCCc--EE
Confidence            79999999887732 22332111000     0000000000    0  0000111233566789999998887654  56


Q ss_pred             EecCCCeeeeeecc
Q psy17610        468 WETCDGSIIRSLEG  481 (515)
Q Consensus       468 wd~~~~~~~~~~~~  481 (515)
                      ||..+++.++.+..
T Consensus       194 ~d~~~n~v~~~lP~  207 (243)
T PF07250_consen  194 YDYKTNTVVRTLPD  207 (243)
T ss_pred             EeCCCCeEEeeCCC
Confidence            78888877766654

Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=93.35  E-value=0.78  Score=38.62  Aligned_cols=65  Identities=11%  Similarity=0.078  Sum_probs=43.4

Q ss_pred             EecCCCEEEEEecCceEEEEECCCCceeEEe------ec-------cCccCeEEEEeCCCCcEEEEEecCCcEEEEeCC
Q psy17610         89 YNPVNNKVFVGTVNCEIFLIDMNSGFTLTLV------NT-------CHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVR  154 (515)
Q Consensus        89 ~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~------~~-------~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~  154 (515)
                      +..++++|++-+.+|.+++||+.+++.+...      +.       .....|..+.++.+|.-+++- ++|....|+.+
T Consensus        18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~l-sng~~y~y~~~   95 (219)
T PF07569_consen   18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTL-SNGDSYSYSPD   95 (219)
T ss_pred             EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEE-eCCCEEEeccc
Confidence            4457899999999999999999986443221      21       244567777777776554443 34666777654

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>PF13449 Phytase-like: Esterase-like activity of phytase

Probab=93.23  E-value=6.4  Score=35.79  Aligned_cols=155  Identities=14%  Similarity=0.158  Sum_probs=91.7

Q ss_pred             CceEEEEEecCCCEEEEEeCCCc------EEEEEcccc----eEEE-----EEEcC-c--------cEEEEEEcCCCcEE
Q psy17610        254 SSVSVIQIKSDSKEAMSASTDGT------CVLWDLIKS----TRLI-----IMILP-S--------MIMSAAYHPSEVQL  309 (515)
Q Consensus       254 ~~v~~~~~~~~~~~l~~~~~d~~------i~iwd~~~~----~~~~-----~~~~~-~--------~~~~~~~~~~~~~l  309 (515)
                      +.+..+.+.+++..+++.+.+|.      +...++...    ..+.     .+..+ .        ...++++.+++.++
T Consensus        20 GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g~~~   99 (326)
T PF13449_consen   20 GGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPDGSFW   99 (326)
T ss_pred             CcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecCCCEE
Confidence            45677888866667777777777      555554430    0111     11111 1        34577887778877


Q ss_pred             EEEECC------CeEEEEeCCCCceEEEEec--------------CCCccEEEEEEcCCCCEEEEEcCC-----C-----
Q psy17610        310 ITCSTN------KMIDYWETCDGSIIRSLEG--------------SDVAAVNCVDFVDDGKYFLTGGAD-----Q-----  359 (515)
Q Consensus       310 ~~~~~~------~~i~~~d~~~~~~~~~~~~--------------~~~~~i~~~~~~~~~~~l~~~~~d-----g-----  359 (515)
                      ++.-.+      ..|..++.. ++....+..              ..+.....++++|+|+.|+++.+.     +     
T Consensus       100 is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E~~l~~d~~~~~~  178 (326)
T PF13449_consen  100 ISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAMESPLKQDGPRANP  178 (326)
T ss_pred             EEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEECccccCCCccccc
Confidence            777667      789899876 666555421              123567889999999966655432     2     


Q ss_pred             ----eEEEE--EccC-Cee----eeeccC-----CCCCeeEEEECCCCcEEEEEe-----CCCcEEEEeCC
Q psy17610        360 ----IVKMW--MYRE-GVP----CFVGIG-----HAASITKIKISPDKKVIVSVS-----ADGGIFLWTFP  409 (515)
Q Consensus       360 ----~i~i~--d~~~-~~~----~~~~~~-----~~~~i~~~~~~~~~~~l~~~~-----~dg~i~iw~~~  409 (515)
                          .++++  |..+ ++.    ...+..     ....|+.+.+-+++++|+.=-     ....++++.+.
T Consensus       179 ~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLvLER~~~~~~~~~~ri~~v~  249 (326)
T PF13449_consen  179 DNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLVLERDFSPGTGNYKRIYRVD  249 (326)
T ss_pred             ccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEEEEccCCCCccceEEEEEEE
Confidence                14554  4443 212    222222     456789999999998766431     23355666554

>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family

Probab=93.16  E-value=6.9  Score=35.98  Aligned_cols=40  Identities=15%  Similarity=0.023  Sum_probs=19.4

Q ss_pred             CcEEEEEcccceEEEEEEcCc--cEEEEEEcCCCcEEEEEEC
Q psy17610        275 GTCVLWDLIKSTRLIIMILPS--MIMSAAYHPSEVQLITCST  314 (515)
Q Consensus       275 ~~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~  314 (515)
                      ..+..||..+.+-...-..+.  .........+++.++.|+.
T Consensus       168 ~~v~~YDp~t~~W~~~~~~p~~~r~~~~~~~~~~~iyv~GG~  209 (346)
T TIGR03547       168 KNVLSYDPSTNQWRNLGENPFLGTAGSAIVHKGNKLLLINGE  209 (346)
T ss_pred             ceEEEEECCCCceeECccCCCCcCCCceEEEECCEEEEEeee
Confidence            357788877654333222221  1112222345666666664

Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein.

>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3

Probab=93.11  E-value=6.9  Score=35.85  Aligned_cols=189  Identities=14%  Similarity=0.174  Sum_probs=110.3

Q ss_pred             eCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEc----CCCCE--EEEecC-C---CcEEEEEccCCceee
Q psy17610        176 YDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAIT----QDGTR--LLSGGG-E---GQVRIWKLTRESQSL  245 (515)
Q Consensus       176 ~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~--l~~~~~-d---~~i~iw~~~~~~~~~  245 (515)
                      |...+++....++-+.+||++..+ +..+..+   .++.+..-    -.|+.  |+.++. +   ..|++|.++..+..+
T Consensus        66 p~kSlIigTdK~~GL~VYdL~Gk~-lq~~~~G---r~NNVDvrygf~l~g~~vDlavas~R~~g~n~l~~f~id~~~g~L  141 (381)
T PF02333_consen   66 PAKSLIIGTDKKGGLYVYDLDGKE-LQSLPVG---RPNNVDVRYGFPLNGKTVDLAVASDRSDGRNSLRLFRIDPDTGEL  141 (381)
T ss_dssp             GGG-EEEEEETTTEEEEEETTS-E-EEEE-SS----EEEEEEEEEEEETTEEEEEEEEEE-CCCT-EEEEEEEETTTTEE
T ss_pred             cccceEEEEeCCCCEEEEcCCCcE-EEeecCC---CcceeeeecceecCCceEEEEEEecCcCCCCeEEEEEecCCCCcc
Confidence            345577777888899999987554 4444333   33333221    13332  444442 2   469999886433333


Q ss_pred             EEee------ccccCceEEEEEe--c-CCC-EEEEEeCCCcEEEEEcc---c----ceEEEEEEcCccEEEEEEcCCCcE
Q psy17610        246 QCVL------KEHTSSVSVIQIK--S-DSK-EAMSASTDGTCVLWDLI---K----STRLIIMILPSMIMSAAYHPSEVQ  308 (515)
Q Consensus       246 ~~~~------~~~~~~v~~~~~~--~-~~~-~l~~~~~d~~i~iwd~~---~----~~~~~~~~~~~~~~~~~~~~~~~~  308 (515)
                      ....      ......+..+|+-  + ++. +++....+|.+..|.+.   .    .+.++.+...+.+..|........
T Consensus       142 ~~v~~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f~~~sQ~EGCVVDDe~g~  221 (381)
T PF02333_consen  142 TDVTDPAAPIATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREFKVGSQPEGCVVDDETGR  221 (381)
T ss_dssp             EE-CBTTC-EE-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEEE-SS-EEEEEEETTTTE
T ss_pred             eEcCCCCcccccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEecCCCcceEEEEecccCC
Confidence            2211      1112346677764  3 344 56667788988888774   2    356888888999999999999999


Q ss_pred             EEEEECCCeEEEEeCCCC-----ceEEEEec-CCCccEEEEEEc--CCC-CEEEEE-cCCCeEEEEEccC
Q psy17610        309 LITCSTNKMIDYWETCDG-----SIIRSLEG-SDVAAVNCVDFV--DDG-KYFLTG-GADQIVKMWMYRE  368 (515)
Q Consensus       309 l~~~~~~~~i~~~d~~~~-----~~~~~~~~-~~~~~i~~~~~~--~~~-~~l~~~-~~dg~i~i~d~~~  368 (515)
                      |+.+-++.-|.-|+....     +.+....+ +-...+..+++-  +++ .||++. -.+++..+|+.+.
T Consensus       222 LYvgEE~~GIW~y~Aep~~~~~~~~v~~~~g~~l~aDvEGlaly~~~~g~gYLivSsQG~~sf~Vy~r~~  291 (381)
T PF02333_consen  222 LYVGEEDVGIWRYDAEPEGGNDRTLVASADGDGLVADVEGLALYYGSDGKGYLIVSSQGDNSFAVYDREG  291 (381)
T ss_dssp             EEEEETTTEEEEEESSCCC-S--EEEEEBSSSSB-S-EEEEEEEE-CCC-EEEEEEEGGGTEEEEEESST
T ss_pred             EEEecCccEEEEEecCCCCCCcceeeecccccccccCccceEEEecCCCCeEEEEEcCCCCeEEEEecCC
Confidence            999999999999987632     12222222 122456666664  333 345444 4467899999864

1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.

>KOG4460|consensus

Probab=92.83  E-value=4.9  Score=37.77  Aligned_cols=98  Identities=14%  Similarity=0.203  Sum_probs=56.7

Q ss_pred             CCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCC---cEE
Q psy17610        380 ASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSE---VQL  456 (515)
Q Consensus       380 ~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~---~~l  456 (515)
                      -.|..+..++.|..++-++.+|.+.++=.+.................+...-..+.......-.+...+|+|+.   ..|
T Consensus       104 feV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL  183 (741)
T KOG4460|consen  104 FEVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHL  183 (741)
T ss_pred             EEEEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCceE
Confidence            35778888999999999999986655432222211111111111111111111122222223347789999986   678


Q ss_pred             EEeecCCeEEEEecCCCeeee
Q psy17610        457 ITCSTNKMIDYWETCDGSIIR  477 (515)
Q Consensus       457 ~~~~~dg~v~iwd~~~~~~~~  477 (515)
                      ..-+.|..+|+||+.+...+.
T Consensus       184 ~iL~sdnviRiy~lS~~tely  204 (741)
T KOG4460|consen  184 VLLTSDNVIRIYSLSEPTELY  204 (741)
T ss_pred             EEEecCcEEEEEecCCcchhh
Confidence            888889999999998765543

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=92.53  E-value=1.8  Score=36.45  Aligned_cols=66  Identities=15%  Similarity=0.275  Sum_probs=48.6

Q ss_pred             EeeCCCEEEEEeCCCeEEEEecCCCceEEEe------cC-------CCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccC
Q psy17610        174 FTYDGKAILSGWNDGFIRCFTPQSGKLKFII------PN-------AHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTR  240 (515)
Q Consensus       174 ~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~------~~-------~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~  240 (515)
                      +..++++|++.+.+|.+++||+.+++.....      ..       .....|..+.++.+|.-+++-+ +|....|+.+-
T Consensus        18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~~L   96 (219)
T PF07569_consen   18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSPDL   96 (219)
T ss_pred             EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEecccc
Confidence            5567889999999999999999998764332      11       3456688888888887666554 47788888643

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>KOG1983|consensus

Probab=92.52  E-value=17  Score=38.73  Aligned_cols=227  Identities=12%  Similarity=0.072  Sum_probs=99.2

Q ss_pred             EEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEE
Q psy17610        168 ICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQC  247 (515)
Q Consensus       168 ~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~  247 (515)
                      ....++|+|....++.++..|.|+++-...-+............+..+.+-...........+..+.+|........   
T Consensus        37 ~~~~~afD~~q~llai~t~tg~i~~yg~~~ve~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~---  113 (993)
T KOG1983|consen   37 TPSALAFDPTQGLLAIGTRTGAIKIYGQPGVEFVGLHPKQNQINVTRIELLVGISRNLVLSDDDSLHLWSIKIKTGV---  113 (993)
T ss_pred             CCcceeeccccceEEEEEecccEEEecccceEEEeccccccchhhhheeeeecccccceeecccceeeeccccccee---
Confidence            34568999999999999999999999765444433221111112222222221222333344455666654321111   


Q ss_pred             eeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCcc----EEEEEEcCCCcE-EEEEECCCeEEEEe
Q psy17610        248 VLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSM----IMSAAYHPSEVQ-LITCSTNKMIDYWE  322 (515)
Q Consensus       248 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~~~-l~~~~~~~~i~~~d  322 (515)
                         .....+.+....+--.+ +.+ ..+.++.||..-............    ......++.-.. ......+-  ..+.
T Consensus       114 ---~~~~~~~~~~~~~~~~~-~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~--~~~~  186 (993)
T KOG1983|consen  114 ---FLKQEITSFVTDPPPDW-LIG-ENGLVKVSDVLRHQLSDLKYAGTESSNFVPYESLSPTLSIEGLVIDLDT--VLIS  186 (993)
T ss_pred             ---ecCCcceeccCCCCcch-hcc-cCceeeEeeechhhhccceeccccccccceeeeeccceeeecccccccc--ceee
Confidence               11222333322222223 344 777888887643222111111100    000000000000 00000000  0000


Q ss_pred             CCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCc
Q psy17610        323 TCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGG  402 (515)
Q Consensus       323 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~  402 (515)
                      +....  ..+.... .++.+..+..... ++.+...+.+-+|+.........+     .+.....++++..++++..||.
T Consensus       187 ~~~~~--~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~v~~h~Dgs  257 (993)
T KOG1983|consen  187 LPDAY--LGLSLIE-YESLQVLYYSPTK-ILIGFNRGLVVIKDRASKYVQSAY-----LPNGQLESRDGSHFVSYHTDGS  257 (993)
T ss_pred             ccccc--ccccccc-cccceeeeecCCC-cceeeeeeeeeehhcccccchhhc-----ccccccCccCCceEEEEEecCC
Confidence            00000  0111111 3333444333333 233344556666655433222222     1121222889999999999999


Q ss_pred             EEEEeCCCCcC
Q psy17610        403 IFLWTFPELED  413 (515)
Q Consensus       403 i~iw~~~~~~~  413 (515)
                      +..||......
T Consensus       258 ~~fWd~s~g~~  268 (993)
T KOG1983|consen  258 YAFWDVSSGKL  268 (993)
T ss_pred             EEeeecCCCce
Confidence            99999988643

>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3

Probab=92.52  E-value=8.4  Score=35.33  Aligned_cols=189  Identities=13%  Similarity=0.182  Sum_probs=105.8

Q ss_pred             cCCCEEEEEecCceEEEEECCCCceeEEeeccCccCe---EEEEeCCCCcE--EEEEec-C---CcEEEEeCCCC-ceeE
Q psy17610         91 PVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAI---YDLQFPVNFSS--VFATCS-K---NDIRIWSVRTL-NELL  160 (515)
Q Consensus        91 ~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v---~~~~~~~~~~~--l~~~~~-d---~~i~iw~~~~~-~~~~  160 (515)
                      |...+++...+++-+.+||++. +.+...-.+....|   ..+.+  .|+.  |++++. +   .+|++|.+... ..+.
T Consensus        66 p~kSlIigTdK~~GL~VYdL~G-k~lq~~~~Gr~NNVDvrygf~l--~g~~vDlavas~R~~g~n~l~~f~id~~~g~L~  142 (381)
T PF02333_consen   66 PAKSLIIGTDKKGGLYVYDLDG-KELQSLPVGRPNNVDVRYGFPL--NGKTVDLAVASDRSDGRNSLRLFRIDPDTGELT  142 (381)
T ss_dssp             GGG-EEEEEETTTEEEEEETTS--EEEEE-SS-EEEEEEEEEEEE--TTEEEEEEEEEE-CCCT-EEEEEEEETTTTEEE
T ss_pred             cccceEEEEeCCCCEEEEcCCC-cEEEeecCCCcceeeeecceec--CCceEEEEEEecCcCCCCeEEEEEecCCCCcce
Confidence            4566777778888999999997 56655533332222   12222  3333  444443 2   46999987632 2333


Q ss_pred             EEEe-------cCeEEEEEEEe--e-CCC-EEEEEeCCCeEEEEecC---CC----ceEEEecCCCCCCeEEEEEcCCCC
Q psy17610        161 RISV-------MNMICACIVFT--Y-DGK-AILSGWNDGFIRCFTPQ---SG----KLKFIIPNAHNRGVTALAITQDGT  222 (515)
Q Consensus       161 ~~~~-------~~~~v~~~~~~--~-~~~-~l~~~~~dg~i~~~~~~---~~----~~~~~~~~~~~~~v~~~~~~~~~~  222 (515)
                      .+..       ....+..+++-  | +|. +.++...+|.+..|.+.   .+    +.++.+.  -...+..+.......
T Consensus       143 ~v~~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f~--~~sQ~EGCVVDDe~g  220 (381)
T PF02333_consen  143 DVTDPAAPIATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREFK--VGSQPEGCVVDDETG  220 (381)
T ss_dssp             E-CBTTC-EE-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEEE---SS-EEEEEEETTTT
T ss_pred             EcCCCCcccccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEec--CCCcceEEEEecccC
Confidence            3322       11235566653  3 344 56677888988877664   33    3455552  345788899988888


Q ss_pred             EEEEecCCCcEEEEEccCCc---eeeEEeec--cccCceEEEEEec--CCC-EEE-EEeCCCcEEEEEccc
Q psy17610        223 RLLSGGGEGQVRIWKLTRES---QSLQCVLK--EHTSSVSVIQIKS--DSK-EAM-SASTDGTCVLWDLIK  284 (515)
Q Consensus       223 ~l~~~~~d~~i~iw~~~~~~---~~~~~~~~--~~~~~v~~~~~~~--~~~-~l~-~~~~d~~i~iwd~~~  284 (515)
                      .|..+-++.-|.-|+.+...   ...+....  .....|..+++-.  +++ +|+ +.-.+++..+|+.+.
T Consensus       221 ~LYvgEE~~GIW~y~Aep~~~~~~~~v~~~~g~~l~aDvEGlaly~~~~g~gYLivSsQG~~sf~Vy~r~~  291 (381)
T PF02333_consen  221 RLYVGEEDVGIWRYDAEPEGGNDRTLVASADGDGLVADVEGLALYYGSDGKGYLIVSSQGDNSFAVYDREG  291 (381)
T ss_dssp             EEEEEETTTEEEEEESSCCC-S--EEEEEBSSSSB-S-EEEEEEEE-CCC-EEEEEEEGGGTEEEEEESST
T ss_pred             CEEEecCccEEEEEecCCCCCCcceeeecccccccccCccceEEEecCCCCeEEEEEcCCCCeEEEEecCC
Confidence            99999998777777775322   22222222  2445677777753  332 444 444567899999764

1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.

>PRK14131 N-acetylneuraminic acid mutarotase; Provisional

Probab=92.44  E-value=9.3  Score=35.63  Aligned_cols=41  Identities=10%  Similarity=-0.057  Sum_probs=20.2

Q ss_pred             cEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeC
Q psy17610        232 QVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST  273 (515)
Q Consensus       232 ~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  273 (515)
                      .+.+||..++.......++.....-.++.. .+++..+.|+.
T Consensus       190 ~v~~YD~~t~~W~~~~~~p~~~~~~~a~v~-~~~~iYv~GG~  230 (376)
T PRK14131        190 EVLSYDPSTNQWKNAGESPFLGTAGSAVVI-KGNKLWLINGE  230 (376)
T ss_pred             eEEEEECCCCeeeECCcCCCCCCCcceEEE-ECCEEEEEeee
Confidence            588889866655544333221111122322 25566666664

>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]

Probab=92.34  E-value=5.3  Score=32.61  Aligned_cols=172  Identities=12%  Similarity=0.055  Sum_probs=88.6

Q ss_pred             CCcEEEEEec--CCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEE-EEeCCCeEEEEecCCCceEEEecCCCCCC
Q psy17610        135 NFSSVFATCS--KNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAIL-SGWNDGFIRCFTPQSGKLKFIIPNAHNRG  211 (515)
Q Consensus       135 ~~~~l~~~~~--d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~~~~~~~~~~~~~~~~~~~~~  211 (515)
                      +|..+.+++.  ...|++||+.+++.+....-....+..=-...-++++. ....+|.-..+|.++-+++..+..  ++.
T Consensus        55 ~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg~~~y--~Ge  132 (262)
T COG3823          55 DGHILESTGLYGFSKIRVSDLTTGQEIFSEKLAPDTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELGRFSY--EGE  132 (262)
T ss_pred             CCEEEEeccccccceeEEEeccCceEEEEeecCCccccccceeeccceEEEEEeccceeEEEChHHhhhhccccc--CCc
Confidence            4445555554  56799999999988776553322222111122233333 345688888999998888776632  222


Q ss_pred             eEEEEEcCCCCEEEEecCCCcEEEEEccCCc--eeeEEeeccc-cCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEE
Q psy17610        212 VTALAITQDGTRLLSGGGEGQVRIWKLTRES--QSLQCVLKEH-TSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRL  288 (515)
Q Consensus       212 v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~  288 (515)
                      =..++  .|+..|+.+....+++.-|..+-.  ........+. -..++-+.|- +|...+-.=.+..|...+..+++.+
T Consensus       133 GWgLt--~d~~~LimsdGsatL~frdP~tfa~~~~v~VT~~g~pv~~LNELE~V-dG~lyANVw~t~~I~rI~p~sGrV~  209 (262)
T COG3823         133 GWGLT--SDDKNLIMSDGSATLQFRDPKTFAELDTVQVTDDGVPVSKLNELEWV-DGELYANVWQTTRIARIDPDSGRVV  209 (262)
T ss_pred             ceeee--cCCcceEeeCCceEEEecCHHHhhhcceEEEEECCeecccccceeee-ccEEEEeeeeecceEEEcCCCCcEE
Confidence            23333  355557766655666666653211  1111111111 1112223332 3444433333444555566666666


Q ss_pred             EEEEcC-------------ccEEEEEEcCCCcEEEE
Q psy17610        289 IIMILP-------------SMIMSAAYHPSEVQLIT  311 (515)
Q Consensus       289 ~~~~~~-------------~~~~~~~~~~~~~~l~~  311 (515)
                      ..+...             .-...+++.|++..++.
T Consensus       210 ~widlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~i  245 (262)
T COG3823         210 AWIDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLI  245 (262)
T ss_pred             EEEEccCCchhcCccccccccccceeecCcCCeEEE
Confidence            555432             23567788887754444

>COG4257 Vgb Streptogramin lyase [Defense mechanisms]

Probab=92.26  E-value=6.7  Score=33.61  Aligned_cols=247  Identities=13%  Similarity=0.051  Sum_probs=148.6

Q ss_pred             EEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCC
Q psy17610         75 LYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVR  154 (515)
Q Consensus        75 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~  154 (515)
                      .+.......-..++-+|||..-.++...+.|=-.|..+|+....-+ +....-..+..-|||..-++=+.. -|.-.|-+
T Consensus        55 ~fpvp~G~ap~dvapapdG~VWft~qg~gaiGhLdP~tGev~~ypL-g~Ga~Phgiv~gpdg~~Witd~~~-aI~R~dpk  132 (353)
T COG4257          55 EFPVPNGSAPFDVAPAPDGAVWFTAQGTGAIGHLDPATGEVETYPL-GSGASPHGIVVGPDGSAWITDTGL-AIGRLDPK  132 (353)
T ss_pred             eeccCCCCCccccccCCCCceEEecCccccceecCCCCCceEEEec-CCCCCCceEEECCCCCeeEecCcc-eeEEecCc
Confidence            3444556777889999999988888888888888988875544443 345556778888888666554443 45445554


Q ss_pred             CCceeEEEE----ecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCC
Q psy17610        155 TLNELLRIS----VMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGE  230 (515)
Q Consensus       155 ~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  230 (515)
                      +.+. .++.    ..........|.+.|++-+++.. |.---.|..++ .+..++.........|+..|+|..-++.-.+
T Consensus       133 t~ev-t~f~lp~~~a~~nlet~vfD~~G~lWFt~q~-G~yGrLdPa~~-~i~vfpaPqG~gpyGi~atpdGsvwyaslag  209 (353)
T COG4257         133 TLEV-TRFPLPLEHADANLETAVFDPWGNLWFTGQI-GAYGRLDPARN-VISVFPAPQGGGPYGICATPDGSVWYASLAG  209 (353)
T ss_pred             ccce-EEeecccccCCCcccceeeCCCccEEEeecc-ccceecCcccC-ceeeeccCCCCCCcceEECCCCcEEEEeccc
Confidence            4432 2222    22345667889999987777652 22222232222 2333334445566788999999887776666


Q ss_pred             CcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCc---cEEEEEEcCCCc
Q psy17610        231 GQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPS---MIMSAAYHPSEV  307 (515)
Q Consensus       231 ~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---~~~~~~~~~~~~  307 (515)
                      ..|-..|......+.+..-......-..+--+|.+..-++....+.+..+|..... -.....++   ...++.....++
T Consensus       210 naiaridp~~~~aev~p~P~~~~~gsRriwsdpig~~wittwg~g~l~rfdPs~~s-W~eypLPgs~arpys~rVD~~gr  288 (353)
T COG4257         210 NAIARIDPFAGHAEVVPQPNALKAGSRRIWSDPIGRAWITTWGTGSLHRFDPSVTS-WIEYPLPGSKARPYSMRVDRHGR  288 (353)
T ss_pred             cceEEcccccCCcceecCCCcccccccccccCccCcEEEeccCCceeeEeCccccc-ceeeeCCCCCCCcceeeeccCCc
Confidence            67777776433222222222212333445556777777776667778888765544 33333332   456666666666


Q ss_pred             EEEEEECCCeEEEEeCCCCc
Q psy17610        308 QLITCSTNKMIDYWETCDGS  327 (515)
Q Consensus       308 ~l~~~~~~~~i~~~d~~~~~  327 (515)
                      .-++-...+.|.-+|.++.+
T Consensus       289 VW~sea~agai~rfdpeta~  308 (353)
T COG4257         289 VWLSEADAGAIGRFDPETAR  308 (353)
T ss_pred             EEeeccccCceeecCcccce
Confidence            66655556667777765543

>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates

Probab=92.12  E-value=1  Score=44.55  Aligned_cols=75  Identities=17%  Similarity=0.225  Sum_probs=47.3

Q ss_pred             cCCCEEEEEecCceEEEEECCC----CceeEEeecc---------------------CccCeEEEEeCC----CCcEEEE
Q psy17610         91 PVNNKVFVGTVNCEIFLIDMNS----GFTLTLVNTC---------------------HTSAIYDLQFPV----NFSSVFA  141 (515)
Q Consensus        91 ~~~~~l~~~~~d~~i~iw~~~~----~~~~~~~~~~---------------------h~~~v~~~~~~~----~~~~l~~  141 (515)
                      ++...++++..||.+.......    +.........                     ....+..++.++    +..++++
T Consensus       156 ~~~~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t  235 (547)
T PF11715_consen  156 DSEANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEINDDTFLFT  235 (547)
T ss_dssp             -SSSBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ETTTEEEE
T ss_pred             cCCCEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCCCCEEEE
Confidence            4677788888999888887764    2122111111                     123455666666    6679999


Q ss_pred             EecCCcEEEEeCCCCceeEEEEec
Q psy17610        142 TCSKNDIRIWSVRTLNELLRISVM  165 (515)
Q Consensus       142 ~~~d~~i~iw~~~~~~~~~~~~~~  165 (515)
                      .+.|+++|+||+.+++++......
T Consensus       236 l~~D~~LRiW~l~t~~~~~~~~~~  259 (547)
T PF11715_consen  236 LSRDHTLRIWSLETGQCLATIDLL  259 (547)
T ss_dssp             EETTSEEEEEETTTTCEEEEEETT
T ss_pred             EeCCCeEEEEECCCCeEEEEeccc
Confidence            999999999999999997776544

The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.

>COG1520 FOG: WD40-like repeat [Function unknown]

Probab=92.10  E-value=10  Score=35.31  Aligned_cols=197  Identities=14%  Similarity=0.145  Sum_probs=106.3

Q ss_pred             CEEEEEecCceEEEEECCCCceeEEeeccC-ccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecC-eEEEE
Q psy17610         94 NKVFVGTVNCEIFLIDMNSGFTLTLVNTCH-TSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMN-MICAC  171 (515)
Q Consensus        94 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~-~~v~~  171 (515)
                      ..+.++..+|.|.-.|.+++..+-...... ...+..-.+..+| .+++++.++.+...|.++|+.+....... ..+..
T Consensus        69 g~v~~~~~~G~i~A~d~~~g~~~W~~~~~~~~~~~~~~~~~~~G-~i~~g~~~g~~y~ld~~~G~~~W~~~~~~~~~~~~  147 (370)
T COG1520          69 GTVYVGTRDGNIFALNPDTGLVKWSYPLLGAVAQLSGPILGSDG-KIYVGSWDGKLYALDASTGTLVWSRNVGGSPYYAS  147 (370)
T ss_pred             CeEEEecCCCcEEEEeCCCCcEEecccCcCcceeccCceEEeCC-eEEEecccceEEEEECCCCcEEEEEecCCCeEEec
Confidence            345556788888888888876443221111 1223333333366 58888889989999998999988887666 22222


Q ss_pred             EEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCC--CCCeEEEEEcCCCCEEEEecC--CCcEEEEEccCCceeeEE
Q psy17610        172 IVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAH--NRGVTALAITQDGTRLLSGGG--EGQVRIWKLTRESQSLQC  247 (515)
Q Consensus       172 ~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~--d~~i~iw~~~~~~~~~~~  247 (515)
                      ...-.++ .+...+.++.+...+..+|+.........  ...+..-....++ .+..+..  ++.+.-.|...+......
T Consensus       148 ~~v~~~~-~v~~~s~~g~~~al~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~vy~~~~~~~~~~~a~~~~~G~~~w~~  225 (370)
T COG1520         148 PPVVGDG-TVYVGTDDGHLYALNADTGTLKWTYETPAPLSLSIYGSPAIASG-TVYVGSDGYDGILYALNAEDGTLKWSQ  225 (370)
T ss_pred             CcEEcCc-EEEEecCCCeEEEEEccCCcEEEEEecCCccccccccCceeecc-eEEEecCCCcceEEEEEccCCcEeeee
Confidence            2222333 34444478999999999898876643221  1111111112233 3444444  454555555333322221


Q ss_pred             ee---ccccC-----ceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC
Q psy17610        248 VL---KEHTS-----SVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP  294 (515)
Q Consensus       248 ~~---~~~~~-----~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~  294 (515)
                      ..   .+...     .+..-...-+ ..+..++.++.+...|..+++.+.....+
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~v~v~-~~~~~~~~~g~~~~l~~~~G~~~W~~~~~  279 (370)
T COG1520         226 KVSQTIGRTAISTTPAVDGGPVYVD-GGVYAGSYGGKLLCLDADTGELIWSFPAG  279 (370)
T ss_pred             eeecccCcccccccccccCceEEEC-CcEEEEecCCeEEEEEcCCCceEEEEecc
Confidence            11   11110     0100011112 22456677788888898888888877765

>KOG1900|consensus

Probab=92.10  E-value=2.9  Score=43.85  Aligned_cols=138  Identities=17%  Similarity=0.253  Sum_probs=87.5

Q ss_pred             ecCCcEEEEeCCCCceeEEEEecCeEEEEEEE--------eeCCCEEEEEeCCCeEEEEecC----CCceE-----EEec
Q psy17610        143 CSKNDIRIWSVRTLNELLRISVMNMICACIVF--------TYDGKAILSGWNDGFIRCFTPQ----SGKLK-----FIIP  205 (515)
Q Consensus       143 ~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~--------~~~~~~l~~~~~dg~i~~~~~~----~~~~~-----~~~~  205 (515)
                      +-|+.+.+|+.+++.....+.+....|..+..        .|.=+++++...--.|.++-+.    ++..-     ..+ 
T Consensus        96 TiDn~L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~~~~~~~~f~~~~~i-  174 (1311)
T KOG1900|consen   96 TIDNNLFLWNYESDNELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDEFTGELSIFNTSFKI-  174 (1311)
T ss_pred             EeCCeEEEEEcCCCCccccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEeccccCcccccccceee-
Confidence            45889999999998888777776666655553        2333455555455556665332    22111     111 


Q ss_pred             CCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEcc--CCce--------------------eeEEeec-cccCceEEEEEe
Q psy17610        206 NAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLT--RESQ--------------------SLQCVLK-EHTSSVSVIQIK  262 (515)
Q Consensus       206 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~--~~~~--------------------~~~~~~~-~~~~~v~~~~~~  262 (515)
                      ......|+++....+|+.+++| .||  .+|.+.  ....                    .....+. .+.++|..+...
T Consensus       175 ~~dg~~V~~I~~t~nGRIF~~G-~dg--~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~dpI~qi~ID  251 (1311)
T KOG1900|consen  175 SVDGVSVNCITYTENGRIFFAG-RDG--NLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKDPIRQITID  251 (1311)
T ss_pred             ecCCceEEEEEeccCCcEEEee-cCC--CEEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCCCCcceeeEec
Confidence            1235568899988888877755 555  444431  1100                    0011223 567799999999


Q ss_pred             cCCCEEEEEeCCCcEEEEEccc
Q psy17610        263 SDSKEAMSASTDGTCVLWDLIK  284 (515)
Q Consensus       263 ~~~~~l~~~~~d~~i~iwd~~~  284 (515)
                      ...+.+.+-++.|+|.+||+..
T Consensus       252 ~SR~IlY~lsek~~v~~Y~i~~  273 (1311)
T KOG1900|consen  252 NSRNILYVLSEKGTVSAYDIGG  273 (1311)
T ss_pred             cccceeeeeccCceEEEEEccC
Confidence            8888899999999999999865

>PRK14131 N-acetylneuraminic acid mutarotase; Provisional

Probab=91.99  E-value=11  Score=35.27  Aligned_cols=14  Identities=7%  Similarity=-0.026  Sum_probs=9.1

Q ss_pred             cEEEEEcccceEEE
Q psy17610        276 TCVLWDLIKSTRLI  289 (515)
Q Consensus       276 ~i~iwd~~~~~~~~  289 (515)
                      .+.+||..+.+-..
T Consensus       190 ~v~~YD~~t~~W~~  203 (376)
T PRK14131        190 EVLSYDPSTNQWKN  203 (376)
T ss_pred             eEEEEECCCCeeeE
Confidence            47888877665433

>PLN02153 epithiospecifier protein

Probab=91.69  E-value=11  Score=34.68  Aligned_cols=177  Identities=9%  Similarity=0.040  Sum_probs=81.9

Q ss_pred             eEEEEecCCCceEEEecCCCCC-----CeEEEEEcCCCCEEEEecCC-----CcEEEEEccCCceeeEEeecc---ccCc
Q psy17610        189 FIRCFTPQSGKLKFIIPNAHNR-----GVTALAITQDGTRLLSGGGE-----GQVRIWKLTRESQSLQCVLKE---HTSS  255 (515)
Q Consensus       189 ~i~~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~d-----~~i~iw~~~~~~~~~~~~~~~---~~~~  255 (515)
                      .+.+||+.+.+.......+...     ....+.+  ++++++.|+.+     ..+.+||..+........+..   ....
T Consensus        51 ~~~~yd~~~~~W~~~~~~~~~p~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~p~~R  128 (341)
T PLN02153         51 DLYVFDFNTHTWSIAPANGDVPRISCLGVRMVAV--GTKLYIFGGRDEKREFSDFYSYDTVKNEWTFLTKLDEEGGPEAR  128 (341)
T ss_pred             cEEEEECCCCEEEEcCccCCCCCCccCceEEEEE--CCEEEEECCCCCCCccCcEEEEECCCCEEEEeccCCCCCCCCCc
Confidence            4778888776544321111100     1122222  45666777653     357788886555444332211   0111


Q ss_pred             eEEEEEecCCCEEEEEeCC-----------CcEEEEEcccceEEEEEEcC----cc-EEEEEEcCCCcEEEEEEC-----
Q psy17610        256 VSVIQIKSDSKEAMSASTD-----------GTCVLWDLIKSTRLIIMILP----SM-IMSAAYHPSEVQLITCST-----  314 (515)
Q Consensus       256 v~~~~~~~~~~~l~~~~~d-----------~~i~iwd~~~~~~~~~~~~~----~~-~~~~~~~~~~~~l~~~~~-----  314 (515)
                      ....+..-+++.++.|+.+           ..+.+||..+.+-.......    .. -.+++. -+++.++.++.     
T Consensus       129 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~  207 (341)
T PLN02153        129 TFHSMASDENHVYVFGGVSKGGLMKTPERFRTIEAYNIADGKWVQLPDPGENFEKRGGAGFAV-VQGKIWVVYGFATSIL  207 (341)
T ss_pred             eeeEEEEECCEEEEECCccCCCccCCCcccceEEEEECCCCeEeeCCCCCCCCCCCCcceEEE-ECCeEEEEeccccccc
Confidence            1111222355666666653           24677887765433211111    11 112222 34555555432     


Q ss_pred             --------CCeEEEEeCCCCceEEEEec---CCCccEEEEEEcCCCCEEEEEcCC--------------CeEEEEEccCC
Q psy17610        315 --------NKMIDYWETCDGSIIRSLEG---SDVAAVNCVDFVDDGKYFLTGGAD--------------QIVKMWMYREG  369 (515)
Q Consensus       315 --------~~~i~~~d~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~d--------------g~i~i~d~~~~  369 (515)
                              ...+.+||+.+.+-...-..   +......++ ..-++++++.|+..              +.+..+|..+.
T Consensus       208 ~gG~~~~~~~~v~~yd~~~~~W~~~~~~g~~P~~r~~~~~-~~~~~~iyv~GG~~~~~~~~~~~~~~~~n~v~~~d~~~~  286 (341)
T PLN02153        208 PGGKSDYESNAVQFFDPASGKWTEVETTGAKPSARSVFAH-AVVGKYIIIFGGEVWPDLKGHLGPGTLSNEGYALDTETL  286 (341)
T ss_pred             cCCccceecCceEEEEcCCCcEEeccccCCCCCCcceeee-EEECCEEEEECcccCCccccccccccccccEEEEEcCcc
Confidence                    24588888877654332111   110111122 22356778888752              25777887654

>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family

Probab=91.67  E-value=11  Score=34.73  Aligned_cols=42  Identities=10%  Similarity=-0.058  Sum_probs=21.9

Q ss_pred             CcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeC
Q psy17610        231 GQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST  273 (515)
Q Consensus       231 ~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  273 (515)
                      ..+..||..+++......++.....-..+ ...+++..+.++.
T Consensus       168 ~~v~~YDp~t~~W~~~~~~p~~~r~~~~~-~~~~~~iyv~GG~  209 (346)
T TIGR03547       168 KNVLSYDPSTNQWRNLGENPFLGTAGSAI-VHKGNKLLLINGE  209 (346)
T ss_pred             ceEEEEECCCCceeECccCCCCcCCCceE-EEECCEEEEEeee
Confidence            45888998766655544333111111222 2345677777765

Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein.

>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein

Probab=91.59  E-value=10  Score=34.40  Aligned_cols=109  Identities=13%  Similarity=0.083  Sum_probs=54.5

Q ss_pred             CCCEEEEEeCC-----CeEEEEecCCCceE---EEecC-CCCCCeEEEEEcCCCCEEEEecC-----CCcEEEEEccCCc
Q psy17610        177 DGKAILSGWND-----GFIRCFTPQSGKLK---FIIPN-AHNRGVTALAITQDGTRLLSGGG-----EGQVRIWKLTRES  242 (515)
Q Consensus       177 ~~~~l~~~~~d-----g~i~~~~~~~~~~~---~~~~~-~~~~~v~~~~~~~~~~~l~~~~~-----d~~i~iw~~~~~~  242 (515)
                      ++..++.|+.+     ..+..+|+.+.+..   ..+.. +....-.+++.. +++..+.|+.     ...+..||+.+.+
T Consensus        72 ~~~lyviGG~~~~~~~~~v~~~d~~~~~w~~~~~~~~~lp~~~~~~~~~~~-~~~iYv~GG~~~~~~~~~v~~yd~~~~~  150 (323)
T TIGR03548        72 ENGIYYIGGSNSSERFSSVYRITLDESKEELICETIGNLPFTFENGSACYK-DGTLYVGGGNRNGKPSNKSYLFNLETQE  150 (323)
T ss_pred             CCEEEEEcCCCCCCCceeEEEEEEcCCceeeeeeEcCCCCcCccCceEEEE-CCEEEEEeCcCCCccCceEEEEcCCCCC
Confidence            45555666653     35667777766531   22211 111111122222 4566666664     2357888887665


Q ss_pred             eeeEEeeccccCceEEEEEecCCCEEEEEeCCC----cEEEEEcccceE
Q psy17610        243 QSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDG----TCVLWDLIKSTR  287 (515)
Q Consensus       243 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~----~i~iwd~~~~~~  287 (515)
                      ......+.... .....+...+++..+.|+.++    .+..||+.+.+-
T Consensus       151 W~~~~~~p~~~-r~~~~~~~~~~~iYv~GG~~~~~~~~~~~yd~~~~~W  198 (323)
T TIGR03548       151 WFELPDFPGEP-RVQPVCVKLQNELYVFGGGSNIAYTDGYKYSPKKNQW  198 (323)
T ss_pred             eeECCCCCCCC-CCcceEEEECCEEEEEcCCCCccccceEEEecCCCee
Confidence            55443332211 112222334667777777653    356788776543

Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.

>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat

Probab=91.52  E-value=0.87  Score=26.11  Aligned_cols=32  Identities=19%  Similarity=0.198  Sum_probs=25.7

Q ss_pred             CCCcEEEEEec-CCcEEEEeCCCCceeEEEEec
Q psy17610        134 VNFSSVFATCS-KNDIRIWSVRTLNELLRISVM  165 (515)
Q Consensus       134 ~~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~  165 (515)
                      |++++|+++.. +++|.++|..+++.+..+...
T Consensus         1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~vg   33 (42)
T TIGR02276         1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPVG   33 (42)
T ss_pred             CCCCEEEEEeCCCCEEEEEECCCCeEEEEEECC
Confidence            57788888775 789999999988888777653

This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).

>PF11725 AvrE: Pathogenicity factor; InterPro: IPR021085 This family is secreted by Gram-negative Gammaproteobacteria such as Pseudomonas syringae of tomato and Erwinia amylovora (Fire blight bacteria), amongst others

Probab=91.28  E-value=21  Score=39.14  Aligned_cols=280  Identities=12%  Similarity=0.125  Sum_probs=125.3

Q ss_pred             CCeEEEEEcCCCCE-EEEecCCCcEEEEEccCCcee------eEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEc
Q psy17610        210 RGVTALAITQDGTR-LLSGGGEGQVRIWKLTRESQS------LQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDL  282 (515)
Q Consensus       210 ~~v~~~~~~~~~~~-l~~~~~d~~i~iw~~~~~~~~------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~  282 (515)
                      ..+.+...++++.. ++++.....+.+|++......      ....+.+-.....++.++++  .|+.+..+|.++.=++
T Consensus       438 ~~l~sfSv~~~g~vA~L~~~d~q~~qL~~m~~~~a~~~p~~~~~L~L~dG~a~A~~VgLs~d--rLFvADseGkLYsa~l  515 (1774)
T PF11725_consen  438 DKLKSFSVAPDGTVAMLTGKDGQTLQLHDMSPVDAPPTPRKTKTLQLADGKAQAQSVGLSND--RLFVADSEGKLYSADL  515 (1774)
T ss_pred             hhcccccccCCCceeeeecCCCcceeeeccCccccccCccceeeeeccCCchhhhheeecCC--eEEEEeCCCCEEeccc
Confidence            45677888898887 555655566799998643211      12223333346677777666  6888888998888776


Q ss_pred             ccceEE--EEEEcCccEEEEEEcC-CCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCC
Q psy17610        283 IKSTRL--IIMILPSMIMSAAYHP-SEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQ  359 (515)
Q Consensus       283 ~~~~~~--~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg  359 (515)
                      ...+.-  .....+.....+.=.+ -+...++|.       ..-..|+.-..++... +.+.+.++..++..+=.|-.=.
T Consensus       516 ~~~~~~~~~l~~~p~~~~~~~~~~~G~~~~VtGF-------~~gd~G~lhAlikd~~-GQ~Hs~aLde~~~~~~pGWNLS  587 (1774)
T PF11725_consen  516 PAAQDNEPKLKLMPEPAYQLLGSALGGDHKVTGF-------ISGDDGQLHALIKDRQ-GQRHSHALDEQGSQLQPGWNLS  587 (1774)
T ss_pred             ccccCCCcceEeccccccccccccccccceeecc-------ccCCCCeeeEEEeccC-CceeeccccccCCccCCCCccc
Confidence            543211  0000111110000000 111122211       1112233323333322 5555566655554443332211


Q ss_pred             eEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeec
Q psy17610        360 IVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMI  439 (515)
Q Consensus       360 ~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  439 (515)
                      ...|.+-+.|-.....   ..+-..+.+...|.+   +-.||.|.-||-.+..=.....+..    .+....-....+..
T Consensus       588 d~Lvl~N~~GL~~~~~---p~~~~~ldl~r~G~v---~L~~G~i~~wD~ttq~W~~~~~kd~----~~L~RG~D~~AYVL  657 (1774)
T PF11725_consen  588 DALVLDNTRGLPKPPA---PAPHEILDLGRAGLV---GLQDGKIQYWDSTTQCWKDAGVKDI----DQLKRGLDGNAYVL  657 (1774)
T ss_pred             ceeEeeccCCCCCCCC---CChHHhhccccccce---eeccceEeeecCcchhhhhccCcCH----HHHhccccCCceEe
Confidence            2222232222211111   111122344444432   3357999999865432110000000    00000011111223


Q ss_pred             CcccEEEeeeccCCcEEEEeecCCeEEEEec-CCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEEEE
Q psy17610        440 LPSMIMSAAYHPSEVQLITCSTNKMIDYWET-CDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKIC  511 (515)
Q Consensus       440 ~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw  511 (515)
                      ..+.+..+..++...-++-+...- +.+=-. .+-++-..+.+.....|++++.-.+.+ +++..+.|.+...
T Consensus       658 k~G~vk~l~i~~~~~~~~~g~~~~-~a~~~~r~~~e~G~~l~Gl~~~~i~a~Avv~~~~-fvald~qg~lt~h  728 (1774)
T PF11725_consen  658 KDGKVKRLSINQEHPSIAHGDNNV-FALPQRRNKVELGDALEGLEDRVITAFAVVNDNK-FVALDDQGDLTAH  728 (1774)
T ss_pred             cCCceeeeecccCCCccccCCCcc-cccccccCCCCCCccccCCCcCcceeEEEEcCCc-eEEeccCCccccc
Confidence            445577777777766665554221 111000 111122223333337889998886654 5666777776653

It is an essential pathogenicity factor of approximately 198 kDa. Its injection into the host-plant is dependent upon the bacterial type III or Hrp secretion system []. The family is long and carries a number of predicted functional regions, including an ERMS or endoplasmic reticulum membrane retention signal at both the C- and the N-termini, a leucine-zipper motif from residues 539-560, and a nuclear localisation signal at 1358-1361. This conserved AvrE-family of effectors is among the few that are required for full virulence of many phytopathogenic pseudomonads, erwinias and pantoeas [].

>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast [])

Probab=91.12  E-value=2.9  Score=33.74  Aligned_cols=31  Identities=26%  Similarity=0.363  Sum_probs=26.0

Q ss_pred             ccEEEeeeccCC------cEEEEeecCCeEEEEecCC
Q psy17610        442 SMIMSAAYHPSE------VQLITCSTNKMIDYWETCD  472 (515)
Q Consensus       442 ~~i~~~~~s~~~------~~l~~~~~dg~v~iwd~~~  472 (515)
                      ..+..++|||.|      -.||+.+.++.|.||....
T Consensus        86 ~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~  122 (173)
T PF12657_consen   86 SQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG  122 (173)
T ss_pred             ccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence            379999999954      3789999999999998663

The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].

>PF12768 Rax2: Cortical protein marker for cell polarity

Probab=90.69  E-value=9.9  Score=33.41  Aligned_cols=74  Identities=9%  Similarity=0.061  Sum_probs=48.3

Q ss_pred             CcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEe------CCCeEEEEecCCCceEEEec---CCCCCCeEEEE
Q psy17610        146 NDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGW------NDGFIRCFTPQSGKLKFIIP---NAHNRGVTALA  216 (515)
Q Consensus       146 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------~dg~i~~~~~~~~~~~~~~~---~~~~~~v~~~~  216 (515)
                      ..|++||..+.+-...-.+-.+.|+.+.|..+.+.++.|.      ....+..||..+......-.   ..-.++|+.+.
T Consensus        16 ~~lC~yd~~~~qW~~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w~~~~~~~s~~ipgpv~a~~   95 (281)
T PF12768_consen   16 PGLCLYDTDNSQWSSPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTWSSLGGGSSNSIPGPVTALT   95 (281)
T ss_pred             CEEEEEECCCCEeecCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCeeeecCCcccccCCCcEEEEE
Confidence            4599999877554433334567899999986666666654      34568889988776433221   11247788887


Q ss_pred             EcC
Q psy17610        217 ITQ  219 (515)
Q Consensus       217 ~~~  219 (515)
                      +..
T Consensus        96 ~~~   98 (281)
T PF12768_consen   96 FIS   98 (281)
T ss_pred             eec
Confidence            744

>COG5290 IkappaB kinase complex, IKAP component [Transcription]

Probab=90.59  E-value=20  Score=35.90  Aligned_cols=92  Identities=11%  Similarity=0.138  Sum_probs=50.2

Q ss_pred             EEEEEEcCCCcEEEEEECCC-----eEEEEeCC---CCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccC
Q psy17610        297 IMSAAYHPSEVQLITCSTNK-----MIDYWETC---DGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYRE  368 (515)
Q Consensus       297 ~~~~~~~~~~~~l~~~~~~~-----~i~~~d~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~  368 (515)
                      -..+.|-|+|..+++...||     .+.++..+   .|+.-...  .........+|+-....++.+ ..+.+.+|-..+
T Consensus       249 e~~LSWkpqgS~~ati~td~~~~S~~ViFfErNGLrHGef~lr~--~~dEk~~~~~wn~~s~vlav~-~~n~~~lwttkN  325 (1243)
T COG5290         249 EHQLSWKPQGSKYATIGTDGCSTSESVIFFERNGLRHGEFDLRV--GCDEKAFLENWNLLSTVLAVA-EGNLLKLWTTKN  325 (1243)
T ss_pred             hhccccccCCceeeeeccCCCCCcceEEEEccCCcccCCccccC--CchhhhhhhhhhHHHHHHHHh-hcceEEEEEccc
Confidence            34578999999999877554     35555422   12221111  111334455666555545444 356899997665


Q ss_pred             CeeeeeccCCCCCeeEEEECCCC
Q psy17610        369 GVPCFVGIGHAASITKIKISPDK  391 (515)
Q Consensus       369 ~~~~~~~~~~~~~i~~~~~~~~~  391 (515)
                      -.-.....-.-..+.-+.|+|..
T Consensus       326 yhWYLK~e~~ip~~s~vkwhpe~  348 (1243)
T COG5290         326 YHWYLKVERQIPGISYVKWHPEE  348 (1243)
T ss_pred             eEEEEEEeecCCCcceeeecccc
Confidence            42222222233456778899954

>PRK13613 lipoprotein LpqB; Provisional

Probab=90.59  E-value=19  Score=35.72  Aligned_cols=189  Identities=6%  Similarity=0.040  Sum_probs=102.2

Q ss_pred             cEEEEEEecCCCEEEEEecCc-eEEEEECCCCce----eEEeeccCccCeEEEEeCCCCcEEEEEec--CC--cEEEEeC
Q psy17610         83 GISSLQYNPVNNKVFVGTVNC-EIFLIDMNSGFT----LTLVNTCHTSAIYDLQFPVNFSSVFATCS--KN--DIRIWSV  153 (515)
Q Consensus        83 ~v~~~~~s~~~~~l~~~~~d~-~i~iw~~~~~~~----~~~~~~~h~~~v~~~~~~~~~~~l~~~~~--d~--~i~iw~~  153 (515)
                      .+.+.+.|+++..+|.-..++ .+++..+..+..    ....+.  ....+.-.|.+++ .+-+...  ++  .+++..-
T Consensus       364 ~~~s~avS~~g~~~A~v~~~~~~l~vg~~~~~~~~~~~~~~~~~--~~~Lt~PS~d~~g-~vWtvd~~~~~~~vl~v~~~  440 (599)
T PRK13613        364 PLRRVAVSRDESRAAGISADGDSVYVGSLTPGASIGVHSWGVTA--DGRLTSPSWDGRG-DLWVVDRDPADPRLLWLLQG  440 (599)
T ss_pred             CccceEEcCCCceEEEEcCCCcEEEEeccCCCCccccccceeec--cCcccCCcCcCCC-CEEEecCCCCCceEEEEEcC
Confidence            688999999999888776655 566655544333    222232  2347777888887 5555432  22  2555543


Q ss_pred             CCCceeEEEE--ecC-eEEEEEEEeeCCCEEEEEeC---CCeEEEEec---CCCce-E---EEecCCCCCCeEEEEEcCC
Q psy17610        154 RTLNELLRIS--VMN-MICACIVFTYDGKAILSGWN---DGFIRCFTP---QSGKL-K---FIIPNAHNRGVTALAITQD  220 (515)
Q Consensus       154 ~~~~~~~~~~--~~~-~~v~~~~~~~~~~~l~~~~~---dg~i~~~~~---~~~~~-~---~~~~~~~~~~v~~~~~~~~  220 (515)
                       +++... +.  ... ..|..+..|+||-+++....   .+.|.+=-+   ..+.. +   ..+ ......+.+++|..+
T Consensus       441 -~G~~~~-V~~~~l~g~~I~~lrvSrDG~RvAvv~~~~g~~~v~va~V~R~~~G~~~l~~~~~l-~~~l~~v~~~~W~~~  517 (599)
T PRK13613        441 -DGEPVE-VRTPELDGHRVVAVRVARDGVRVALIVEKDGRRSLQIGRIVRDAKAVVSVEEFRSL-APELEDVTDMSWAGD  517 (599)
T ss_pred             -CCcEEE-eeccccCCCEeEEEEECCCccEEEEEEecCCCcEEEEEEEEeCCCCcEEeeccEEe-ccCCCccceeEEcCC
Confidence             444421 22  222 37999999999998876543   245544322   23321 1   111 112335899999998


Q ss_pred             CCEEEEec-CCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCC-EEEEEeCCCcE
Q psy17610        221 GTRLLSGG-GEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSK-EAMSASTDGTC  277 (515)
Q Consensus       221 ~~~l~~~~-~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i  277 (515)
                      +.+++.+. .++...+|.+.-............-..+..++...+.. .++.+..++.|
T Consensus       518 ~sL~Vlg~~~~~~~~v~~v~vdG~~~~~~~~~~v~~~~~ia~~~~~~~~~v~~~~~~~v  576 (599)
T PRK13613        518 SQLVVLGREEGGVQQARYVQVDGSTPPASAPAAVTGVESITASEDERLPLVAGTSEDGI  576 (599)
T ss_pred             CEEEEEeccCCCCcceEEEecCCcCcccccccCCCCeeEEEecCCCCceEEEEecCCCe
Confidence            88766553 23344455443222222211222344556566665555 34442455554

>KOG1900|consensus

Probab=90.32  E-value=5.3  Score=42.10  Aligned_cols=146  Identities=14%  Similarity=0.107  Sum_probs=89.7

Q ss_pred             cCCCeEEEEEccCCeeeeeccCCCCCeeEEEE--------CCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeec
Q psy17610        356 GADQIVKMWMYREGVPCFVGIGHAASITKIKI--------SPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISR  427 (515)
Q Consensus       356 ~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~--------~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~  427 (515)
                      +-|+.+.+|+.+++.....+.+-+..|..+..        -|.=+++.....--.|.++-+.-.+.......-.      
T Consensus        96 TiDn~L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~~~~~~~~f~------  169 (1311)
T KOG1900|consen   96 TIDNNLFLWNYESDNELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDEFTGELSIFN------  169 (1311)
T ss_pred             EeCCeEEEEEcCCCCccccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEeccccCcccccc------
Confidence            34778999999998777777777777777653        2333455555555667777655433221111100      


Q ss_pred             ccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEE--EEecCCC---e-e----------------eeeecccccc
Q psy17610        428 STARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMID--YWETCDG---S-I----------------IRSLEGSDVA  485 (515)
Q Consensus       428 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~--iwd~~~~---~-~----------------~~~~~~~~~~  485 (515)
                           ........+..|+++....+|+.+++|- ||.|+  +|...+|   + +                +..+.+.+..
T Consensus       170 -----~~~~i~~dg~~V~~I~~t~nGRIF~~G~-dg~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~d  243 (1311)
T KOG1900|consen  170 -----TSFKISVDGVSVNCITYTENGRIFFAGR-DGNLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKD  243 (1311)
T ss_pred             -----cceeeecCCceEEEEEeccCCcEEEeec-CCCEEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCCCC
Confidence                 0112222345588999888888777765 44333  2222221   1 1                1112223347


Q ss_pred             eEEEEEEcCCCcEEEEeecCCeEEEEEE
Q psy17610        486 AVNCVDFVDDGKYFLTGGADQIVKICLY  513 (515)
Q Consensus       486 ~v~~~~~s~~~~~l~s~~~dg~v~iw~~  513 (515)
                      +|..++....-+.|.+-++.|+|++|+.
T Consensus       244 pI~qi~ID~SR~IlY~lsek~~v~~Y~i  271 (1311)
T KOG1900|consen  244 PIRQITIDNSRNILYVLSEKGTVSAYDI  271 (1311)
T ss_pred             cceeeEeccccceeeeeccCceEEEEEc
Confidence            9999999888888999999999999985

>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat

Probab=89.28  E-value=2.7  Score=23.95  Aligned_cols=40  Identities=10%  Similarity=0.097  Sum_probs=28.3

Q ss_pred             cCCCEEEEEe-CCCcEEEEEcccceEEEEEEcCccEEEEEE
Q psy17610        263 SDSKEAMSAS-TDGTCVLWDLIKSTRLIIMILPSMIMSAAY  302 (515)
Q Consensus       263 ~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~  302 (515)
                      |++++++++. .+++|.++|..+++....+........+++
T Consensus         1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~vg~~P~~i~~   41 (42)
T TIGR02276         1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPVGGYPFGVAV   41 (42)
T ss_pred             CCCCEEEEEeCCCCEEEEEECCCCeEEEEEECCCCCceEEe
Confidence            4667666655 478999999988888877776554555544

This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).

>PLN00033 photosystem II stability/assembly factor; Provisional

Probab=89.12  E-value=19  Score=33.61  Aligned_cols=145  Identities=13%  Similarity=0.071  Sum_probs=81.1

Q ss_pred             EEEEEecCCCEEEEEeCCCcEEEEEcccce-EEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCc-----eEE
Q psy17610        257 SVIQIKSDSKEAMSASTDGTCVLWDLIKST-RLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGS-----IIR  330 (515)
Q Consensus       257 ~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~-----~~~  330 (515)
                      ..+...+++.+++.+..-..++-||--... .......+..+..+.+.+++..++++ ..|.+.. ....++     ...
T Consensus       242 ~~v~~~~dG~~~~vg~~G~~~~s~d~G~~~W~~~~~~~~~~l~~v~~~~dg~l~l~g-~~G~l~~-S~d~G~~~~~~~f~  319 (398)
T PLN00033        242 STVNRSPDGDYVAVSSRGNFYLTWEPGQPYWQPHNRASARRIQNMGWRADGGLWLLT-RGGGLYV-SKGTGLTEEDFDFE  319 (398)
T ss_pred             eeEEEcCCCCEEEEECCccEEEecCCCCcceEEecCCCccceeeeeEcCCCCEEEEe-CCceEEE-ecCCCCccccccee
Confidence            344556777666655543333334432111 22333445568889999998888766 4455433 233332     222


Q ss_pred             EEecC-CCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeec---cCCCCCeeEEEECCCCcEEEEEeCCCcEEEE
Q psy17610        331 SLEGS-DVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVG---IGHAASITKIKISPDKKVIVSVSADGGIFLW  406 (515)
Q Consensus       331 ~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw  406 (515)
                      ..... ....+..+.+.+++..+++| ..|.+.... ..|+.-...   ..-....+.+.|.++++-++++ .+|.|.-|
T Consensus       320 ~~~~~~~~~~l~~v~~~~d~~~~a~G-~~G~v~~s~-D~G~tW~~~~~~~~~~~~ly~v~f~~~~~g~~~G-~~G~il~~  396 (398)
T PLN00033        320 EADIKSRGFGILDVGYRSKKEAWAAG-GSGILLRST-DGGKSWKRDKGADNIAANLYSVKFFDDKKGFVLG-NDGVLLRY  396 (398)
T ss_pred             ecccCCCCcceEEEEEcCCCcEEEEE-CCCcEEEeC-CCCcceeEccccCCCCcceeEEEEcCCCceEEEe-CCcEEEEe
Confidence            22222 22458889999888766665 467665543 344432322   2334578899998877666655 77777655

>PLN02193 nitrile-specifier protein

Probab=88.98  E-value=23  Score=34.25  Aligned_cols=195  Identities=9%  Similarity=-0.051  Sum_probs=0.0

Q ss_pred             CCCEEEEEecC-------ceEEEEECCCCceeEEeecc---CccCeEEEEeCCCCcEEEEEecC-----CcEEEEeCCCC
Q psy17610         92 VNNKVFVGTVN-------CEIFLIDMNSGFTLTLVNTC---HTSAIYDLQFPVNFSSVFATCSK-----NDIRIWSVRTL  156 (515)
Q Consensus        92 ~~~~l~~~~~d-------~~i~iw~~~~~~~~~~~~~~---h~~~v~~~~~~~~~~~l~~~~~d-----~~i~iw~~~~~  156 (515)
                      ++.+++.|+.+       ..+.+||+.+..-......+   ...........-++...+.++.+     +.+..+|+.+.
T Consensus       175 ~~~iyv~GG~~~~~~~~~~~v~~yD~~~~~W~~~~~~g~~P~~~~~~~~~v~~~~~lYvfGG~~~~~~~ndv~~yD~~t~  254 (470)
T PLN02193        175 GNKIYSFGGEFTPNQPIDKHLYVFDLETRTWSISPATGDVPHLSCLGVRMVSIGSTLYVFGGRDASRQYNGFYSFDTTTN  254 (470)
T ss_pred             CCEEEEECCcCCCCCCeeCcEEEEECCCCEEEeCCCCCCCCCCcccceEEEEECCEEEEECCCCCCCCCccEEEEECCCC


Q ss_pred             ceeEEEEe---cCeEEEEEEEeeCCCEEEEEeCCCe-----EEEEecCCCceEEEec--CCCCCCeEEEEEcCCCCEEEE
Q psy17610        157 NELLRISV---MNMICACIVFTYDGKAILSGWNDGF-----IRCFTPQSGKLKFIIP--NAHNRGVTALAITQDGTRLLS  226 (515)
Q Consensus       157 ~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~dg~-----i~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~  226 (515)
                      +-...-..   ....-...+..-+++..+.|+.++.     +..||+.+.+......  ......-......-+++.++.
T Consensus       255 ~W~~l~~~~~~P~~R~~h~~~~~~~~iYv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~R~~~~~~~~~gkiyvi  334 (470)
T PLN02193        255 EWKLLTPVEEGPTPRSFHSMAADEENVYVFGGVSATARLKTLDSYNIVDKKWFHCSTPGDSFSIRGGAGLEVVQGKVWVV  334 (470)
T ss_pred             EEEEcCcCCCCCCCccceEEEEECCEEEEECCCCCCCCcceEEEEECCCCEEEeCCCCCCCCCCCCCcEEEEECCcEEEE


Q ss_pred             ecCC----CcEEEEEccCCceeeEEee-ccccCceEEEEEecCCCEEEEEeCCC--------------cEEEEEcccce
Q psy17610        227 GGGE----GQVRIWKLTRESQSLQCVL-KEHTSSVSVIQIKSDSKEAMSASTDG--------------TCVLWDLIKST  286 (515)
Q Consensus       227 ~~~d----~~i~iw~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~--------------~i~iwd~~~~~  286 (515)
                      ++.+    ..+.+||+.+......... ..........+..-+++.++.++...              .+.++|+.+.+
T Consensus       335 GG~~g~~~~dv~~yD~~t~~W~~~~~~g~~P~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~ndv~~~D~~t~~  413 (470)
T PLN02193        335 YGFNGCEVDDVHYYDPVQDKWTQVETFGVRPSERSVFASAAVGKHIVIFGGEIAMDPLAHVGPGQLTDGTFALDTETLQ  413 (470)
T ss_pred             ECCCCCccCceEEEECCCCEEEEeccCCCCCCCcceeEEEEECCEEEEECCccCCccccccCccceeccEEEEEcCcCE

>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast [])

Probab=88.94  E-value=4  Score=32.95  Aligned_cols=31  Identities=23%  Similarity=0.162  Sum_probs=26.1

Q ss_pred             CcEEEEEEecCC------CEEEEEecCceEEEEECCC
Q psy17610         82 SGISSLQYNPVN------NKVFVGTVNCEIFLIDMNS  112 (515)
Q Consensus        82 ~~v~~~~~s~~~------~~l~~~~~d~~i~iw~~~~  112 (515)
                      ..|.+++|||.|      -+||+-+.++.|.||....
T Consensus        86 ~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~  122 (173)
T PF12657_consen   86 SQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG  122 (173)
T ss_pred             ccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence            489999999954      4688889999999998775

The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	515
2ymu_A	577	Structure Of A Highly Repetitive Propeller Structur		8e-21
2ymu_A	577	Structure Of A Highly Repetitive Propeller Structur		2e-17
4aow_A	340	Crystal Structure Of The Human Rack1 Protein At A R		9e-14
2zkq_a	317	Structure Of A Mammalian Ribosomal 40s Subunit With		1e-13
2g9a_A	311	Structural Basis For The Specific Recognition Of Me		3e-11
2g9a_A	311	Structural Basis For The Specific Recognition Of Me		1e-05
2h68_A	312	Histone H3 Recognition And Presentation By The Wdr5		3e-11
2h68_A	312	Histone H3 Recognition And Presentation By The Wdr5		1e-05
3smr_A	312	Crystal Structure Of Human Wd Repeat Domain 5 With		3e-11
3smr_A	312	Crystal Structure Of Human Wd Repeat Domain 5 With		1e-05
3n0e_A	315	Crystal Structure Of Wdr5 Mutant (W330y) Length = 3		3e-11
3n0e_A	315	Crystal Structure Of Wdr5 Mutant (W330y) Length = 3		1e-05
2g99_A	308	Structural Basis For The Specific Recognition Of Me		3e-11
2g99_A	308	Structural Basis For The Specific Recognition Of Me		1e-05
3emh_A	318	Structural Basis Of Wdr5-Mll Interaction Length = 3		3e-11
3emh_A	318	Structural Basis Of Wdr5-Mll Interaction Length = 3		1e-05
2h9l_A	329	Wdr5delta23 Length = 329		3e-11
2h9l_A	329	Wdr5delta23 Length = 329		9e-06
2h9m_A	313	Wdr5 In Complex With Unmodified H3k4 Peptide Length		3e-11
2h9m_A	313	Wdr5 In Complex With Unmodified H3k4 Peptide Length		1e-05
3n0d_A	315	Crystal Structure Of Wdr5 Mutant (W330f) Length = 3		3e-11
3n0d_A	315	Crystal Structure Of Wdr5 Mutant (W330f) Length = 3		1e-05
4a7j_A	318	Symmetric Dimethylation Of H3 Arginine 2 Is A Novel		3e-11
4a7j_A	318	Symmetric Dimethylation Of H3 Arginine 2 Is A Novel		1e-05
3psl_A	318	Fine-Tuning The Stimulation Of Mll1 Methyltransfera		3e-11
3psl_A	318	Fine-Tuning The Stimulation Of Mll1 Methyltransfera		1e-05
2h13_A	317	Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length		3e-11
2h13_A	317	Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length		1e-05
2cnx_A	315	Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.		4e-11
2cnx_A	315	Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.		9e-06
2gnq_A	336	Structure Of Wdr5 Length = 336		5e-11
2gnq_A	336	Structure Of Wdr5 Length = 336		1e-05
2xl2_A	334	Wdr5 In Complex With An Rbbp5 Peptide Recruited To		5e-11
2xl2_A	334	Wdr5 In Complex With An Rbbp5 Peptide Recruited To		1e-05
2co0_A	315	Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs		7e-11
2co0_A	315	Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs		2e-05
2co0_A	315	Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs		2e-05
3mxx_A	315	Crystal Structure Of Wdr5 Mutant (S62a) Length = 31		8e-11
3mxx_A	315	Crystal Structure Of Wdr5 Mutant (S62a) Length = 31		2e-05
3dm0_A	694	Maltose Binding Protein Fusion With Rack1 From A. T		3e-10
3shf_A	1256	Crystal Structure Of The R265s Mutant Of Full-Lengt		3e-10
3shf_A	1256	Crystal Structure Of The R265s Mutant Of Full-Lengt		2e-08
3sfz_A	1249	Crystal Structure Of Full-Length Murine Apaf-1 Leng		3e-10
3sfz_A	1249	Crystal Structure Of Full-Length Murine Apaf-1 Leng		2e-08
3rfg_A	319	Crystal Structure Of The Yeast Rack1 Dimer In Space		3e-10
3rfh_A	319	Crystal Structure Of The Yeast Rack1 Dimer In Space		3e-10
3izb_a	319	Localization Of The Small Subunit Ribosomal Protein		4e-10
3jyv_R	313	Structure Of The 40s Rrna And Proteins And PE TRNA		4e-10
1trj_A	314	Homology Model Of Yeast Rack1 Protein Fitted Into 1		4e-10
3frx_A	319	Crystal Structure Of The Yeast Orthologue Of Rack1,		1e-09
2xzm_R	343	Crystal Structure Of The Eukaryotic 40s Ribosomal S		3e-09
3zey_7	318	High-resolution Cryo-electron Microscopy Structure		3e-09
3zey_7	318	High-resolution Cryo-electron Microscopy Structure		8e-09
1erj_A	393	Crystal Structure Of The C-Terminal Wd40 Domain Of		4e-09
1vyh_C	410	Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410		7e-09
1vyh_C	410	Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410		2e-06
3iza_B	1263	Structure Of An Apoptosome-Procaspase-9 Card Comple		1e-08
1p22_A	435	Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex		6e-08
1p22_A	435	Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex		7e-08
1gxr_A	337	Wd40 Region Of Human Groucho/tle1 Length = 337		1e-07
3ow8_A	321	Crystal Structure Of The Wd Repeat-Containing Prote		1e-07
1nr0_A	611	Two Seven-Bladed Beta-Propeller Domains Revealed By		6e-07
1nr0_A	611	Two Seven-Bladed Beta-Propeller Domains Revealed By		1e-04
1r5m_A	425	Crystal Structure Of The C-Terminal Wd40 Domain Of		1e-06
2pbi_B	354	The Multifunctional Nature Of Gbeta5RGS9 REVEALED F		1e-06
3mkq_A	814	Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subco		1e-05
2ynp_A	604	Yeast Betaprime Cop 1-604 With Ktktn Motif Length =		2e-05
2yno_A	310	Yeast Betaprime Cop 1-304h6 Length = 310		3e-05
2ynn_A	304	Yeast Betaprime Cop 1-304 With Ktktn Motif Length =		3e-05
3fm0_A	345	Crystal Structure Of Wd40 Protein Ciao1 Length = 34		3e-05
1got_B	340	Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimer		4e-05
1a0r_B	340	Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-		4e-05
2ovp_B	445	Structure Of The Skp1-Fbw7 Complex Length = 445		5e-05
3sn6_B	351	Crystal Structure Of The Beta2 Adrenergic Receptor-		6e-05
2bcj_B	340	Crystal Structure Of G Protein-coupled Receptor Kin		6e-05
1gg2_B	340	G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Bet		7e-05
3acp_A	417	Crystal Structure Of Yeast Rpn14, A Chaperone Of Th		9e-05
3vl1_A	420	Crystal Structure Of Yeast Rpn14 Length = 420		9e-05
3iz6_a	380	Localization Of The Small Subunit Ribosomal Protein		4e-04

>pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577

Iteration: 1
 Score = 98.6 bits (244), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 93/434 (21%), Positives = 178/434 (41%), Gaps = 34/434 (7%)
Query: 77  LLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNF 136
           L    S +  + ++P    +   + +  + L + N     TL  T H+S+++ + F  + 
Sbjct: 94  LTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTL--TGHSSSVWGVAFSPDG 151
Query: 137 SSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQ 196
            ++ +      +++W+ R    L  ++  +     + F+ DG+ I S  +D  ++ +   
Sbjct: 152 QTIASASDDKTVKLWN-RNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN 210
Query: 197 SGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSV 256
              L+ +    H+  V  +A + DG  + S   +  V++W   R  Q LQ  L  H+SSV
Sbjct: 211 GQLLQTLT--GHSSSVRGVAFSPDGQTIASASDDKTVKLWN--RNGQLLQT-LTGHSSSV 265
Query: 257 SVIQIKSDSKEAMSASTDGTCVLWDLIKSTRXXXXXXXXXXXXAAYHPSEVQLITCSTNK 316
           + +  + D +   SAS D T  LW+                   A+ P    + + S +K
Sbjct: 266 NGVAFRPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDK 325
Query: 317 MIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGI 376
            +  W   +G  +++L G   ++V  V F  DG+   +   D+ VK+W  R G       
Sbjct: 326 TVKLWN-RNGQHLQTLTGHS-SSVWGVAFSPDGQTIASASDDKTVKLW-NRNGQLLQTLT 382
Query: 377 GHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDXXXXXXXXXXXXXXXXXXX 436
           GH++S+  +  SPD + I S S D  + LW                              
Sbjct: 383 GHSSSVRGVAFSPDGQTIASASDDKTVKLWN---------------------RNGQLLQT 421
Query: 437 XXXXXXXXXXAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDG 496
                      A+ P +  + + S +K +  W   +G ++++L G   ++V  V F  DG
Sbjct: 422 LTGHSSSVWGVAFSPDDQTIASASDDKTVKLWN-RNGQLLQTLTGHS-SSVRGVAFSPDG 479
Query: 497 KYFLTGGADQIVKI 510
           +   +   D+ VK+
Sbjct: 480 QTIASASDDKTVKL 493

>pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/355 (22%), Positives = 142/355 (40%), Gaps = 31/355 (8%)
Query: 156 LNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTAL 215
           + E  R+   +     + F+ DG+ I S  +D  ++ +      L+ +    H+  V  +
Sbjct: 6   VKERNRLEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLT--GHSSSVWGV 63
Query: 216 AITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDG 275
           A + DG  + S   +  V++W   R  Q LQ  L  H+SSV  +    D +   SAS D 
Sbjct: 64  AFSPDGQTIASASDDKTVKLWN--RNGQLLQT-LTGHSSSVRGVAFSPDGQTIASASDDK 120
Query: 276 TCVLWDLIKSTRXXXXXXXXXXXXAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGS 335
           T  LW+                   A+ P    + + S +K +  W   +G ++++L G 
Sbjct: 121 TVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN-RNGQLLQTLTGH 179
Query: 336 DVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIV 395
             ++V  V F  DG+   +   D+ VK+W  R G       GH++S+  +  SPD + I 
Sbjct: 180 S-SSVWGVAFSPDGQTIASASDDKTVKLW-NRNGQLLQTLTGHSSSVRGVAFSPDGQTIA 237
Query: 396 SVSADGGIFLWTFPELEDDVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAYHPSEVQ 455
           S S D  + LW                                         A+ P    
Sbjct: 238 SASDDKTVKLWN---------------------RNGQLLQTLTGHSSSVNGVAFRPDGQT 276
Query: 456 LITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKI 510
           + + S +K +  W   +G ++++L G   ++V  V F  DG+   +   D+ VK+
Sbjct: 277 IASASDDKTVKLWN-RNGQLLQTLTGHS-SSVWGVAFSPDGQTIASASDDKTVKL 329

>pdb|4AOW|A Chain A, Crystal Structure Of The Human Rack1 Protein At A Resolution Of 2.45 Angstrom Length = 340

Iteration: 1
 Score = 75.1 bits (183), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 92/211 (43%), Gaps = 7/211 (3%)
Query: 207 AHNRGVTALAIT-QDGTRLLSGGGEGQVRIWKLTRESQSL---QCVLKEHTSSVSVIQIK 262
            HN  VT +A T Q    +LS   +  + +WKLTR+  +    Q  L+ H+  VS + I 
Sbjct: 36  GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVIS 95
Query: 263 SDSKEAMSASTDGTCVLWDLIKSTRXXXXXXXXXXXXA-AYHPSEVQLITCSTNKMIDYW 321
           SD + A+S S DGT  LWDL   T             + A+     Q+++ S +K I  W
Sbjct: 96  SDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLW 155
Query: 322 ETCDGSIIRSLEGSDVAAVNCVDFVDD--GKYFLTGGADQIVKMWMYREGVPCFVGIGHA 379
            T         + S    V+CV F  +      ++ G D++VK+W           IGH 
Sbjct: 156 NTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT 215
Query: 380 ASITKIKISPDKKVIVSVSADGGIFLWTFPE 410
             +  + +SPD  +  S   DG   LW   E
Sbjct: 216 GYLNTVTVSPDGSLCASGGKDGQAMLWDLNE 246

>pdb|2ZKQ|AA Chain a, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 317

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 92/211 (43%), Gaps = 7/211 (3%)
Query: 207 AHNRGVTALAIT-QDGTRLLSGGGEGQVRIWKLTRESQSL---QCVLKEHTSSVSVIQIK 262
            HN  VT +A T Q    +LS   +  + +WKLTR+  +    Q  L+ H+  VS + I 
Sbjct: 13  GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVIS 72
Query: 263 SDSKEAMSASTDGTCVLWDLIK-STRXXXXXXXXXXXXAAYHPSEVQLITCSTNKMIDYW 321
           SD + A+S S DGT  LWDL   +T              A+     Q+++ S +K I  W
Sbjct: 73  SDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLW 132
Query: 322 ETCDGSIIRSLEGSDVAAVNCVDFVDD--GKYFLTGGADQIVKMWMYREGVPCFVGIGHA 379
            T         + S    V+CV F  +      ++ G D++VK+W           IGH 
Sbjct: 133 NTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT 192
Query: 380 ASITKIKISPDKKVIVSVSADGGIFLWTFPE 410
             +  + +SPD  +  S   DG   LW   E
Sbjct: 193 GYLNTVTVSPDGSLCASGGKDGQAMLWDLNE 223

>pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 13/248 (5%)
Query: 172 IVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEG 231
           + F+ +G+ + S   D  I+ +    GK +  I + H  G++ +A + D   L+S   + 
Sbjct: 28  VKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSNLLVSASDDK 86
Query: 232 QVRIWKLTRESQSLQCV--LKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRXX 289
            ++IW ++    S +C+  LK H++ V        S   +S S D +  +WD +K+ +  
Sbjct: 87  TLKIWDVS----SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD-VKTGKCL 141
Query: 290 XXXXXXXXXXAAYHPSE--VQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVD 347
                     +A H +     +++ S + +   W+T  G  +++L   D   V+ V F  
Sbjct: 142 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 201
Query: 348 DGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKIS---PDKKVIVSVSADGGIF 404
           +GKY L    D  +K+W Y +G       GH      I  +      K IVS S D  ++
Sbjct: 202 NGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 261
Query: 405 LWTFPELE 412
           +W     E
Sbjct: 262 IWNLQTKE 269

>pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/221 (19%), Positives = 82/221 (37%), Gaps = 39/221 (17%)
Query: 302 YHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIV 361
           + P+   L + S +K+I  W   DG   +++ G  +  ++ V +  D    ++   D+ +
Sbjct: 30  FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSNLLVSASDDKTL 88
Query: 362 KMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLW---------TFPELE 412
           K+W    G       GH+  +     +P   +IVS S D  + +W         T P   
Sbjct: 89  KIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHS 148
Query: 413 DDVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAYHPSEVQLITCSTNKMIDYWETCD 472
           D V                                 ++     +++ S + +   W+T  
Sbjct: 149 DPVS-----------------------------AVHFNRDGSLIVSSSYDGLCRIWDTAS 179
Query: 473 GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLY 513
           G  +++L   D   V+ V F  +GKY L    D  +K+  Y
Sbjct: 180 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY 220

>pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 13/248 (5%)
Query: 172 IVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEG 231
           + F+ +G+ + S   D  I+ +    GK +  I + H  G++ +A + D   L+S   + 
Sbjct: 29  VKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSNLLVSASDDK 87
Query: 232 QVRIWKLTRESQSLQCV--LKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRXX 289
            ++IW ++    S +C+  LK H++ V        S   +S S D +  +WD +K+ +  
Sbjct: 88  TLKIWDVS----SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD-VKTGKCL 142
Query: 290 XXXXXXXXXXAAYHPSE--VQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVD 347
                     +A H +     +++ S + +   W+T  G  +++L   D   V+ V F  
Sbjct: 143 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 202
Query: 348 DGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKIS---PDKKVIVSVSADGGIF 404
           +GKY L    D  +K+W Y +G       GH      I  +      K IVS S D  ++
Sbjct: 203 NGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 262
Query: 405 LWTFPELE 412
           +W     E
Sbjct: 263 IWNLQTKE 270

>pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/221 (19%), Positives = 82/221 (37%), Gaps = 39/221 (17%)
Query: 302 YHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIV 361
           + P+   L + S +K+I  W   DG   +++ G  +  ++ V +  D    ++   D+ +
Sbjct: 31  FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSNLLVSASDDKTL 89
Query: 362 KMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLW---------TFPELE 412
           K+W    G       GH+  +     +P   +IVS S D  + +W         T P   
Sbjct: 90  KIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHS 149
Query: 413 DDVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAYHPSEVQLITCSTNKMIDYWETCD 472
           D V                                 ++     +++ S + +   W+T  
Sbjct: 150 DPVS-----------------------------AVHFNRDGSLIVSSSYDGLCRIWDTAS 180
Query: 473 GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLY 513
           G  +++L   D   V+ V F  +GKY L    D  +K+  Y
Sbjct: 181 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY 221

>pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 13/248 (5%)
Query: 172 IVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEG 231
           + F+ +G+ + S   D  I+ +    GK +  I + H  G++ +A + D   L+S   + 
Sbjct: 29  VKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSNLLVSASDDK 87
Query: 232 QVRIWKLTRESQSLQCV--LKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRXX 289
            ++IW ++    S +C+  LK H++ V        S   +S S D +  +WD +K+ +  
Sbjct: 88  TLKIWDVS----SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD-VKTGKCL 142
Query: 290 XXXXXXXXXXAAYHPSE--VQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVD 347
                     +A H +     +++ S + +   W+T  G  +++L   D   V+ V F  
Sbjct: 143 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 202
Query: 348 DGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKIS---PDKKVIVSVSADGGIF 404
           +GKY L    D  +K+W Y +G       GH      I  +      K IVS S D  ++
Sbjct: 203 NGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 262
Query: 405 LWTFPELE 412
           +W     E
Sbjct: 263 IWNLQTKE 270

>pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/221 (19%), Positives = 82/221 (37%), Gaps = 39/221 (17%)
Query: 302 YHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIV 361
           + P+   L + S +K+I  W   DG   +++ G  +  ++ V +  D    ++   D+ +
Sbjct: 31  FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSNLLVSASDDKTL 89
Query: 362 KMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLW---------TFPELE 412
           K+W    G       GH+  +     +P   +IVS S D  + +W         T P   
Sbjct: 90  KIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHS 149
Query: 413 DDVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAYHPSEVQLITCSTNKMIDYWETCD 472
           D V                                 ++     +++ S + +   W+T  
Sbjct: 150 DPVS-----------------------------AVHFNRDGSLIVSSSYDGLCRIWDTAS 180
Query: 473 GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLY 513
           G  +++L   D   V+ V F  +GKY L    D  +K+  Y
Sbjct: 181 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY 221

>pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 13/248 (5%)
Query: 172 IVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEG 231
           + F+ +G+ + S   D  I+ +    GK +  I + H  G++ +A + D   L+S   + 
Sbjct: 32  VKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSNLLVSASDDK 90
Query: 232 QVRIWKLTRESQSLQCV--LKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRXX 289
            ++IW ++    S +C+  LK H++ V        S   +S S D +  +WD +K+ +  
Sbjct: 91  TLKIWDVS----SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD-VKTGKCL 145
Query: 290 XXXXXXXXXXAAYHPSE--VQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVD 347
                     +A H +     +++ S + +   W+T  G  +++L   D   V+ V F  
Sbjct: 146 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 205
Query: 348 DGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKIS---PDKKVIVSVSADGGIF 404
           +GKY L    D  +K+W Y +G       GH      I  +      K IVS S D  ++
Sbjct: 206 NGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 265
Query: 405 LWTFPELE 412
           +W     E
Sbjct: 266 IWNLQTKE 273

>pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/221 (19%), Positives = 82/221 (37%), Gaps = 39/221 (17%)
Query: 302 YHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIV 361
           + P+   L + S +K+I  W   DG   +++ G  +  ++ V +  D    ++   D+ +
Sbjct: 34  FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSNLLVSASDDKTL 92
Query: 362 KMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLW---------TFPELE 412
           K+W    G       GH+  +     +P   +IVS S D  + +W         T P   
Sbjct: 93  KIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHS 152
Query: 413 DDVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAYHPSEVQLITCSTNKMIDYWETCD 472
           D V                                 ++     +++ S + +   W+T  
Sbjct: 153 DPV-----------------------------SAVHFNRDGSLIVSSSYDGLCRIWDTAS 183
Query: 473 GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLY 513
           G  +++L   D   V+ V F  +GKY L    D  +K+  Y
Sbjct: 184 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY 224

>pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 13/248 (5%)
Query: 172 IVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEG 231
           + F+ +G+ + S   D  I+ +    GK +  I + H  G++ +A + D   L+S   + 
Sbjct: 25  VKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSNLLVSASDDK 83
Query: 232 QVRIWKLTRESQSLQCV--LKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRXX 289
            ++IW ++    S +C+  LK H++ V        S   +S S D +  +WD +K+ +  
Sbjct: 84  TLKIWDVS----SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD-VKTGKCL 138
Query: 290 XXXXXXXXXXAAYHPSE--VQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVD 347
                     +A H +     +++ S + +   W+T  G  +++L   D   V+ V F  
Sbjct: 139 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 198
Query: 348 DGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKIS---PDKKVIVSVSADGGIF 404
           +GKY L    D  +K+W Y +G       GH      I  +      K IVS S D  ++
Sbjct: 199 NGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 258
Query: 405 LWTFPELE 412
           +W     E
Sbjct: 259 IWNLQTKE 266

>pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/221 (19%), Positives = 82/221 (37%), Gaps = 39/221 (17%)
Query: 302 YHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIV 361
           + P+   L + S +K+I  W   DG   +++ G  +  ++ V +  D    ++   D+ +
Sbjct: 27  FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSNLLVSASDDKTL 85
Query: 362 KMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLW---------TFPELE 412
           K+W    G       GH+  +     +P   +IVS S D  + +W         T P   
Sbjct: 86  KIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHS 145
Query: 413 DDVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAYHPSEVQLITCSTNKMIDYWETCD 472
           D V                                 ++     +++ S + +   W+T  
Sbjct: 146 DPVS-----------------------------AVHFNRDGSLIVSSSYDGLCRIWDTAS 176
Query: 473 GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLY 513
           G  +++L   D   V+ V F  +GKY L    D  +K+  Y
Sbjct: 177 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY 217

>pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 110/250 (44%), Gaps = 13/250 (5%)
Query: 170 ACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGG 229
           + + F+ +G+ + S   D  I+ +    GK +  I + H  G++ +A + D   L+S   
Sbjct: 33  SSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSNLLVSASD 91
Query: 230 EGQVRIWKLTRESQSLQCV--LKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTR 287
           +  ++IW ++    S +C+  LK H++ V        S   +S S D +  +WD +K+ +
Sbjct: 92  DKTLKIWDVS----SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD-VKTGK 146
Query: 288 XXXXXXXXXXXXAAYHPSE--VQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDF 345
                       +A H +     +++ S + +   W+T  G  +++L   D   V+ V F
Sbjct: 147 CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF 206
Query: 346 VDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKIS---PDKKVIVSVSADGG 402
             +GKY L    D  +K+W Y +G       GH      I  +      K IVS S D  
Sbjct: 207 SPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNL 266
Query: 403 IFLWTFPELE 412
           +++W     E
Sbjct: 267 VYIWNLQTKE 276

>pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/221 (19%), Positives = 82/221 (37%), Gaps = 39/221 (17%)
Query: 302 YHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIV 361
           + P+   L + S +K+I  W   DG   +++ G  +  ++ V +  D    ++   D+ +
Sbjct: 37  FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSNLLVSASDDKTL 95
Query: 362 KMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLW---------TFPELE 412
           K+W    G       GH+  +     +P   +IVS S D  + +W         T P   
Sbjct: 96  KIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHS 155
Query: 413 DDVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAYHPSEVQLITCSTNKMIDYWETCD 472
           D V                                 ++     +++ S + +   W+T  
Sbjct: 156 DPVS-----------------------------AVHFNRDGSLIVSSSYDGLCRIWDTAS 186
Query: 473 GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLY 513
           G  +++L   D   V+ V F  +GKY L    D  +K+  Y
Sbjct: 187 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY 227

>pdb|2H9L|A Chain A, Wdr5delta23 Length = 329

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 110/250 (44%), Gaps = 13/250 (5%)
Query: 170 ACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGG 229
           + + F+ +G+ + S   D  I+ +    GK +  I + H  G++ +A + D   L+S   
Sbjct: 44  SSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSNLLVSASD 102
Query: 230 EGQVRIWKLTRESQSLQCV--LKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTR 287
           +  ++IW ++    S +C+  LK H++ V        S   +S S D +  +WD +K+ +
Sbjct: 103 DKTLKIWDVS----SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD-VKTGK 157
Query: 288 XXXXXXXXXXXXAAYHPSE--VQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDF 345
                       +A H +     +++ S + +   W+T  G  +++L   D   V+ V F
Sbjct: 158 CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF 217
Query: 346 VDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKIS---PDKKVIVSVSADGG 402
             +GKY L    D  +K+W Y +G       GH      I  +      K IVS S D  
Sbjct: 218 SPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNL 277
Query: 403 IFLWTFPELE 412
           +++W     E
Sbjct: 278 VYIWNLQTKE 287

>pdb|2H9L|A Chain A, Wdr5delta23 Length = 329

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 44/221 (19%), Positives = 82/221 (37%), Gaps = 39/221 (17%)
Query: 302 YHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIV 361
           + P+   L + S +K+I  W   DG   +++ G  +  ++ V +  D    ++   D+ +
Sbjct: 48  FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSNLLVSASDDKTL 106
Query: 362 KMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLW---------TFPELE 412
           K+W    G       GH+  +     +P   +IVS S D  + +W         T P   
Sbjct: 107 KIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHS 166
Query: 413 DDVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAYHPSEVQLITCSTNKMIDYWETCD 472
           D V                                 ++     +++ S + +   W+T  
Sbjct: 167 DPVS-----------------------------AVHFNRDGSLIVSSSYDGLCRIWDTAS 197
Query: 473 GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLY 513
           G  +++L   D   V+ V F  +GKY L    D  +K+  Y
Sbjct: 198 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY 238

>pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 13/248 (5%)
Query: 172 IVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEG 231
           + F+ +G+ + S   D  I+ +    GK +  I + H  G++ +A + D   L+S   + 
Sbjct: 30  VKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSNLLVSASDDK 88
Query: 232 QVRIWKLTRESQSLQCV--LKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRXX 289
            ++IW ++    S +C+  LK H++ V        S   +S S D +  +WD +K+ +  
Sbjct: 89  TLKIWDVS----SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD-VKTGKCL 143
Query: 290 XXXXXXXXXXAAYHPSE--VQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVD 347
                     +A H +     +++ S + +   W+T  G  +++L   D   V+ V F  
Sbjct: 144 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 203
Query: 348 DGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKIS---PDKKVIVSVSADGGIF 404
           +GKY L    D  +K+W Y +G       GH      I  +      K IVS S D  ++
Sbjct: 204 NGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 263
Query: 405 LWTFPELE 412
           +W     E
Sbjct: 264 IWNLQTKE 271

>pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/221 (19%), Positives = 82/221 (37%), Gaps = 39/221 (17%)
Query: 302 YHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIV 361
           + P+   L + S +K+I  W   DG   +++ G  +  ++ V +  D    ++   D+ +
Sbjct: 32  FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSNLLVSASDDKTL 90
Query: 362 KMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLW---------TFPELE 412
           K+W    G       GH+  +     +P   +IVS S D  + +W         T P   
Sbjct: 91  KIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHS 150
Query: 413 DDVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAYHPSEVQLITCSTNKMIDYWETCD 472
           D V                                 ++     +++ S + +   W+T  
Sbjct: 151 DPVS-----------------------------AVHFNRDGSLIVSSSYDGLCRIWDTAS 181
Query: 473 GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLY 513
           G  +++L   D   V+ V F  +GKY L    D  +K+  Y
Sbjct: 182 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY 222

>pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 13/248 (5%)
Query: 172 IVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEG 231
           + F+ +G+ + S   D  I+ +    GK +  I + H  G++ +A + D   L+S   + 
Sbjct: 32  VKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSNLLVSASDDK 90
Query: 232 QVRIWKLTRESQSLQCV--LKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRXX 289
            ++IW ++    S +C+  LK H++ V        S   +S S D +  +WD +K+ +  
Sbjct: 91  TLKIWDVS----SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD-VKTGKCL 145
Query: 290 XXXXXXXXXXAAYHPSE--VQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVD 347
                     +A H +     +++ S + +   W+T  G  +++L   D   V+ V F  
Sbjct: 146 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 205
Query: 348 DGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKIS---PDKKVIVSVSADGGIF 404
           +GKY L    D  +K+W Y +G       GH      I  +      K IVS S D  ++
Sbjct: 206 NGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 265
Query: 405 LWTFPELE 412
           +W     E
Sbjct: 266 IWNLQTKE 273

>pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/221 (19%), Positives = 82/221 (37%), Gaps = 39/221 (17%)
Query: 302 YHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIV 361
           + P+   L + S +K+I  W   DG   +++ G  +  ++ V +  D    ++   D+ +
Sbjct: 34  FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSNLLVSASDDKTL 92
Query: 362 KMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLW---------TFPELE 412
           K+W    G       GH+  +     +P   +IVS S D  + +W         T P   
Sbjct: 93  KIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHS 152
Query: 413 DDVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAYHPSEVQLITCSTNKMIDYWETCD 472
           D V                                 ++     +++ S + +   W+T  
Sbjct: 153 DPV-----------------------------SAVHFNRDGSLIVSSSYDGLCRIWDTAS 183
Query: 473 GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLY 513
           G  +++L   D   V+ V F  +GKY L    D  +K+  Y
Sbjct: 184 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY 224

>pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 13/248 (5%)
Query: 172 IVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEG 231
           + F+ +G+ + S   D  I+ +    GK +  I + H  G++ +A + D   L+S   + 
Sbjct: 35  VKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSNLLVSASDDK 93
Query: 232 QVRIWKLTRESQSLQCV--LKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRXX 289
            ++IW ++    S +C+  LK H++ V        S   +S S D +  +WD +K+ +  
Sbjct: 94  TLKIWDVS----SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD-VKTGKCL 148
Query: 290 XXXXXXXXXXAAYHPSE--VQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVD 347
                     +A H +     +++ S + +   W+T  G  +++L   D   V+ V F  
Sbjct: 149 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 208
Query: 348 DGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKIS---PDKKVIVSVSADGGIF 404
           +GKY L    D  +K+W Y +G       GH      I  +      K IVS S D  ++
Sbjct: 209 NGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 268
Query: 405 LWTFPELE 412
           +W     E
Sbjct: 269 IWNLQTKE 276

>pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/221 (19%), Positives = 82/221 (37%), Gaps = 39/221 (17%)
Query: 302 YHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIV 361
           + P+   L + S +K+I  W   DG   +++ G  +  ++ V +  D    ++   D+ +
Sbjct: 37  FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSNLLVSASDDKTL 95
Query: 362 KMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLW---------TFPELE 412
           K+W    G       GH+  +     +P   +IVS S D  + +W         T P   
Sbjct: 96  KIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHS 155
Query: 413 DDVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAYHPSEVQLITCSTNKMIDYWETCD 472
           D V                                 ++     +++ S + +   W+T  
Sbjct: 156 DPVS-----------------------------AVHFNRDGSLIVSSSYDGLCRIWDTAS 186
Query: 473 GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLY 513
           G  +++L   D   V+ V F  +GKY L    D  +K+  Y
Sbjct: 187 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY 227

>pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 13/248 (5%)
Query: 172 IVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEG 231
           + F+ +G+ + S   D  I+ +    GK +  I + H  G++ +A + D   L+S   + 
Sbjct: 35  VKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSNLLVSASDDK 93
Query: 232 QVRIWKLTRESQSLQCV--LKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRXX 289
            ++IW ++    S +C+  LK H++ V        S   +S S D +  +WD +K+ +  
Sbjct: 94  TLKIWDVS----SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD-VKTGKCL 148
Query: 290 XXXXXXXXXXAAYHPSE--VQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVD 347
                     +A H +     +++ S + +   W+T  G  +++L   D   V+ V F  
Sbjct: 149 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 208
Query: 348 DGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKIS---PDKKVIVSVSADGGIF 404
           +GKY L    D  +K+W Y +G       GH      I  +      K IVS S D  ++
Sbjct: 209 NGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 268
Query: 405 LWTFPELE 412
           +W     E
Sbjct: 269 IWNLQTKE 276

>pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/221 (19%), Positives = 82/221 (37%), Gaps = 39/221 (17%)
Query: 302 YHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIV 361
           + P+   L + S +K+I  W   DG   +++ G  +  ++ V +  D    ++   D+ +
Sbjct: 37  FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSNLLVSASDDKTL 95
Query: 362 KMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLW---------TFPELE 412
           K+W    G       GH+  +     +P   +IVS S D  + +W         T P   
Sbjct: 96  KIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHS 155
Query: 413 DDVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAYHPSEVQLITCSTNKMIDYWETCD 472
           D V                                 ++     +++ S + +   W+T  
Sbjct: 156 DPVS-----------------------------AVHFNRDGSLIVSSSYDGLCRIWDTAS 186
Query: 473 GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLY 513
           G  +++L   D   V+ V F  +GKY L    D  +K+  Y
Sbjct: 187 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY 227

>pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 13/248 (5%)
Query: 172 IVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEG 231
           + F+ +G+ + S   D  I+ +    GK +  I + H  G++ +A + D   L+S   + 
Sbjct: 34  VKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSNLLVSASDDK 92
Query: 232 QVRIWKLTRESQSLQCV--LKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRXX 289
            ++IW ++    S +C+  LK H++ V        S   +S S D +  +WD +K+ +  
Sbjct: 93  TLKIWDVS----SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD-VKTGKCL 147
Query: 290 XXXXXXXXXXAAYHPSE--VQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVD 347
                     +A H +     +++ S + +   W+T  G  +++L   D   V+ V F  
Sbjct: 148 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 207
Query: 348 DGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKIS---PDKKVIVSVSADGGIF 404
           +GKY L    D  +K+W Y +G       GH      I  +      K IVS S D  ++
Sbjct: 208 NGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 267
Query: 405 LWTFPELE 412
           +W     E
Sbjct: 268 IWNLQTKE 275

>pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/221 (19%), Positives = 82/221 (37%), Gaps = 39/221 (17%)
Query: 302 YHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIV 361
           + P+   L + S +K+I  W   DG   +++ G  +  ++ V +  D    ++   D+ +
Sbjct: 36  FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSNLLVSASDDKTL 94
Query: 362 KMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLW---------TFPELE 412
           K+W    G       GH+  +     +P   +IVS S D  + +W         T P   
Sbjct: 95  KIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHS 154
Query: 413 DDVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAYHPSEVQLITCSTNKMIDYWETCD 472
           D V                                 ++     +++ S + +   W+T  
Sbjct: 155 DPVS-----------------------------AVHFNRDGSLIVSSSYDGLCRIWDTAS 185
Query: 473 GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLY 513
           G  +++L   D   V+ V F  +GKY L    D  +K+  Y
Sbjct: 186 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY 226

>pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/247 (24%), Positives = 105/247 (42%), Gaps = 11/247 (4%)
Query: 172 IVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEG 231
           + F+ +G+ + S   D  I+ +    GK +  I + H  G++ +A + D   L+S   + 
Sbjct: 32  VKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSNLLVSASDDK 90
Query: 232 QVRIWKLTRESQSLQCV--LKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRXX 289
            ++IW ++    S +C+  LK H++ V        S   +S S D +  +WD+       
Sbjct: 91  TLKIWDVS----SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGMCLK 146
Query: 290 XXXXXXXXXXAAYHPSEVQLITCST-NKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDD 348
                     A +   +  LI  S+ + +   W+T  G  +++L   D   V+ V F  +
Sbjct: 147 TLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN 206
Query: 349 GKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKIS---PDKKVIVSVSADGGIFL 405
           GKY L    D  +K+W Y +G       GH      I  +      K IVS S D  +++
Sbjct: 207 GKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYI 266
Query: 406 WTFPELE 412
           W     E
Sbjct: 267 WNLQTKE 273

>pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 44/221 (19%), Positives = 82/221 (37%), Gaps = 39/221 (17%)
Query: 302 YHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIV 361
           + P+   L + S +K+I  W   DG   +++ G  +  ++ V +  D    ++   D+ +
Sbjct: 34  FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSNLLVSASDDKTL 92
Query: 362 KMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLW---------TFPELE 412
           K+W    G       GH+  +     +P   +IVS S D  + +W         T P   
Sbjct: 93  KIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGMCLKTLPAHS 152
Query: 413 DDVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAYHPSEVQLITCSTNKMIDYWETCD 472
           D V                                 ++     +++ S + +   W+T  
Sbjct: 153 DPVS-----------------------------AVHFNRDGSLIVSSSYDGLCRIWDTAS 183
Query: 473 GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLY 513
           G  +++L   D   V+ V F  +GKY L    D  +K+  Y
Sbjct: 184 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY 224

>pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336

Iteration: 1
 Score = 65.9 bits (159), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 110/250 (44%), Gaps = 13/250 (5%)
Query: 170 ACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGG 229
           + + F+ +G+ + S   D  I+ +    GK +  I + H  G++ +A + D   L+S   
Sbjct: 51  SSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSNLLVSASD 109
Query: 230 EGQVRIWKLTRESQSLQCV--LKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTR 287
           +  ++IW ++    S +C+  LK H++ V        S   +S S D +  +WD +K+ +
Sbjct: 110 DKTLKIWDVS----SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD-VKTGK 164
Query: 288 XXXXXXXXXXXXAAYHPSE--VQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDF 345
                       +A H +     +++ S + +   W+T  G  +++L   D   V+ V F
Sbjct: 165 CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF 224
Query: 346 VDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKIS---PDKKVIVSVSADGG 402
             +GKY L    D  +K+W Y +G       GH      I  +      K IVS S D  
Sbjct: 225 SPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNL 284
Query: 403 IFLWTFPELE 412
           +++W     E
Sbjct: 285 VYIWNLQTKE 294

>pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/221 (19%), Positives = 82/221 (37%), Gaps = 39/221 (17%)
Query: 302 YHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIV 361
           + P+   L + S +K+I  W   DG   +++ G  +  ++ V +  D    ++   D+ +
Sbjct: 55  FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSNLLVSASDDKTL 113
Query: 362 KMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLW---------TFPELE 412
           K+W    G       GH+  +     +P   +IVS S D  + +W         T P   
Sbjct: 114 KIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHS 173
Query: 413 DDVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAYHPSEVQLITCSTNKMIDYWETCD 472
           D V                                 ++     +++ S + +   W+T  
Sbjct: 174 DPVS-----------------------------AVHFNRDGSLIVSSSYDGLCRIWDTAS 204
Query: 473 GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLY 513
           G  +++L   D   V+ V F  +GKY L    D  +K+  Y
Sbjct: 205 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY 245

>pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334

Iteration: 1
 Score = 65.9 bits (159), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 110/250 (44%), Gaps = 13/250 (5%)
Query: 170 ACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGG 229
           + + F+ +G+ + S   D  I+ +    GK +  I + H  G++ +A + D   L+S   
Sbjct: 49  SSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSNLLVSASD 107
Query: 230 EGQVRIWKLTRESQSLQCV--LKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTR 287
           +  ++IW ++    S +C+  LK H++ V        S   +S S D +  +WD +K+ +
Sbjct: 108 DKTLKIWDVS----SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD-VKTGK 162
Query: 288 XXXXXXXXXXXXAAYHPSE--VQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDF 345
                       +A H +     +++ S + +   W+T  G  +++L   D   V+ V F
Sbjct: 163 CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF 222
Query: 346 VDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKIS---PDKKVIVSVSADGG 402
             +GKY L    D  +K+W Y +G       GH      I  +      K IVS S D  
Sbjct: 223 SPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNL 282
Query: 403 IFLWTFPELE 412
           +++W     E
Sbjct: 283 VYIWNLQTKE 292

>pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/221 (19%), Positives = 82/221 (37%), Gaps = 39/221 (17%)
Query: 302 YHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIV 361
           + P+   L + S +K+I  W   DG   +++ G  +  ++ V +  D    ++   D+ +
Sbjct: 53  FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSNLLVSASDDKTL 111
Query: 362 KMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLW---------TFPELE 412
           K+W    G       GH+  +     +P   +IVS S D  + +W         T P   
Sbjct: 112 KIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHS 171
Query: 413 DDVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAYHPSEVQLITCSTNKMIDYWETCD 472
           D V                                 ++     +++ S + +   W+T  
Sbjct: 172 DPVS-----------------------------AVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Query: 473 GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLY 513
           G  +++L   D   V+ V F  +GKY L    D  +K+  Y
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY 243

>pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315

Iteration: 1
 Score = 65.5 bits (158), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 60/247 (24%), Positives = 105/247 (42%), Gaps = 11/247 (4%)
Query: 172 IVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEG 231
           + F+ +G+ + S   D  I+ +    GK +  I + H  G++ +A + D   L+S   + 
Sbjct: 32  VKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSNLLVSASDDK 90
Query: 232 QVRIWKLTRESQSLQCV--LKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRXX 289
            ++IW ++    S +C+  LK H++ V        S   +S S D +  +WD+       
Sbjct: 91  TLKIWDVS----SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGMCLK 146
Query: 290 XXXXXXXXXXAAYHPSEVQLITCST-NKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDD 348
                     A +   +  LI  S+ + +   W+T  G  +++L   D   V+ V F  +
Sbjct: 147 TLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN 206
Query: 349 GKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKIS---PDKKVIVSVSADGGIFL 405
           GKY L    D  +K+W Y +G       GH      I  +      K IVS S D  +++
Sbjct: 207 GKYILAATLDNDLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYI 266
Query: 406 WTFPELE 412
           W     E
Sbjct: 267 WNLQTKE 273

>pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/168 (20%), Positives = 70/168 (41%), Gaps = 2/168 (1%)
Query: 240 RESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKST-RXXXXXXXXXXX 298
           + + +L   L  HT +VS ++   + +   S+S D    +W                   
Sbjct: 13  KPNYALMFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGIS 72
Query: 299 XAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGAD 358
             A+      L++ S +K +  W+   G  +++L+G     V C +F       ++G  D
Sbjct: 73  DVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHS-NYVFCCNFNPQSNLIVSGSFD 131
Query: 359 QIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLW 406
           + V++W  + G+       H+  ++ +  + D  +IVS S DG   +W
Sbjct: 132 ESVRIWDVKTGMCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 179

>pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/221 (19%), Positives = 82/221 (37%), Gaps = 39/221 (17%)
Query: 302 YHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIV 361
           + P+   L + S +K+I  W   DG   +++ G  +  ++ V +  D    ++   D+ +
Sbjct: 34  FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSNLLVSASDDKTL 92
Query: 362 KMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLW---------TFPELE 412
           K+W    G       GH+  +     +P   +IVS S D  + +W         T P   
Sbjct: 93  KIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGMCLKTLPAHS 152
Query: 413 DDVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAYHPSEVQLITCSTNKMIDYWETCD 472
           D V                                 ++     +++ S + +   W+T  
Sbjct: 153 DPVS-----------------------------AVHFNRDGSLIVSSSYDGLCRIWDTAS 183
Query: 473 GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLY 513
           G  +++L   D   V+ V F  +GKY L    D  +K+  Y
Sbjct: 184 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNDLKLWDY 224

>pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315

Iteration: 1
 Score = 65.5 bits (158), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 59/248 (23%), Positives = 109/248 (43%), Gaps = 13/248 (5%)
Query: 172 IVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEG 231
           + F+ +G+ + +   D  I+ +    GK +  I + H  G++ +A + D   L+S   + 
Sbjct: 32  VKFSPNGEWLAASSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSNLLVSASDDK 90
Query: 232 QVRIWKLTRESQSLQCV--LKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRXX 289
            ++IW ++    S +C+  LK H++ V        S   +S S D +  +WD +K+ +  
Sbjct: 91  TLKIWDVS----SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD-VKTGKCL 145
Query: 290 XXXXXXXXXXAAYHPSE--VQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVD 347
                     +A H +     +++ S + +   W+T  G  +++L   D   V+ V F  
Sbjct: 146 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 205
Query: 348 DGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKIS---PDKKVIVSVSADGGIF 404
           +GKY L    D  +K+W Y +G       GH      I  +      K IVS S D  ++
Sbjct: 206 NGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 265
Query: 405 LWTFPELE 412
           +W     E
Sbjct: 266 IWNLQTKE 273

>pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/221 (19%), Positives = 81/221 (36%), Gaps = 39/221 (17%)
Query: 302 YHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIV 361
           + P+   L   S +K+I  W   DG   +++ G  +  ++ V +  D    ++   D+ +
Sbjct: 34  FSPNGEWLAASSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSNLLVSASDDKTL 92
Query: 362 KMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLW---------TFPELE 412
           K+W    G       GH+  +     +P   +IVS S D  + +W         T P   
Sbjct: 93  KIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHS 152
Query: 413 DDVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAYHPSEVQLITCSTNKMIDYWETCD 472
           D V                                 ++     +++ S + +   W+T  
Sbjct: 153 DPV-----------------------------SAVHFNRDGSLIVSSSYDGLCRIWDTAS 183
Query: 473 GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLY 513
           G  +++L   D   V+ V F  +GKY L    D  +K+  Y
Sbjct: 184 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY 224

>pdb|3DM0|A Chain A, Maltose Binding Protein Fusion With Rack1 From A. Thaliana Length = 694

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 93/216 (43%), Gaps = 13/216 (6%)
Query: 206 NAHNRGVTALAITQDGTRLL-SGGGEGQVRIWKLTRESQSL---QCVLKEHTSSVSVIQI 261
            AH   VTA+A   D   ++ S   +  + +WKLT++ ++    Q  L  H+  V  + +
Sbjct: 379 RAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVL 438
Query: 262 KSDSKEAMSASTDGTCVLWDLIK--STRXXXXXXXXXXXXAAYHPSEVQLITCSTNKMID 319
            SD + A+S S DG   LWDL    STR             A+     Q+++ S ++ I 
Sbjct: 439 SSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLS-VAFSLDNRQIVSASRDRTIK 497
Query: 320 YWET---CDGSIIRSLEGSDVAAVNCVDFVDD--GKYFLTGGADQIVKMWMYREGVPCFV 374
            W T   C  +I    EG     V+CV F  +      ++   D+ VK+W          
Sbjct: 498 LWNTLGECKYTISEGGEGHR-DWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRST 556
Query: 375 GIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPE 410
             GH   ++ + +SPD  +  S   DG + LW   E
Sbjct: 557 LAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAE 592

>pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 58/305 (19%), Positives = 116/305 (38%), Gaps = 20/305 (6%)
Query: 118 LVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYD 177
           LV   HT A+Y   F  +   + +  +   ++++   T  +LL I        C  F+ D
Sbjct: 616 LVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSD 675
Query: 178 GKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLL--SGGGEGQVRI 235
              I +   D  ++ +   +GKL     + H+  V     T     LL  +G  +  +++
Sbjct: 676 DSYIATCSADKKVKIWDSATGKLVHTY-DEHSEQVNCCHFTNKSNHLLLATGSNDFFLKL 734
Query: 236 WKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRXXXXXXXX 295
           W L +  +  +  +  HT+SV+  +   D +   S S DGT  LWD+  +          
Sbjct: 735 WDLNQ--KECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKR 792
Query: 296 XXXXAAYHPSEVQ--------------LITCSTNKMIDYWETCDGSIIRSLEGSDVAAVN 341
               +   P +V+              +I  + NK++  ++     ++  +     + + 
Sbjct: 793 FFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVL-LFDIHTSGLLAEIHTGHHSTIQ 851
Query: 342 CVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADG 401
             DF       +   +   V++W     +      GH + +  +  SPD    ++ S D 
Sbjct: 852 YCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQ 911
Query: 402 GIFLW 406
            I +W
Sbjct: 912 TIRVW 916

>pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 301 AYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFL--TGGAD 358
           A+   +  + TCS +K +  W++  G ++ + +      VNC  F +   + L  TG  D
Sbjct: 671 AFSSDDSYIATCSADKKVKIWDSATGKLVHTYD-EHSEQVNCCHFTNKSNHLLLATGSND 729
Query: 359 QIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLW 406
             +K+W   +        GH  S+   + SPD +++ S SADG + LW
Sbjct: 730 FFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLW 777

>pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 58/305 (19%), Positives = 116/305 (38%), Gaps = 20/305 (6%)
Query: 118 LVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYD 177
           LV   HT A+Y   F  +   + +  +   ++++   T  +LL I        C  F+ D
Sbjct: 609 LVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSD 668
Query: 178 GKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLL--SGGGEGQVRI 235
              I +   D  ++ +   +GKL     + H+  V     T     LL  +G  +  +++
Sbjct: 669 DSYIATCSADKKVKIWDSATGKLVHTY-DEHSEQVNCCHFTNKSNHLLLATGSNDFFLKL 727
Query: 236 WKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRXXXXXXXX 295
           W L +  +  +  +  HT+SV+  +   D +   S S DGT  LWD+  +          
Sbjct: 728 WDLNQ--KECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKR 785
Query: 296 XXXXAAYHPSEVQ--------------LITCSTNKMIDYWETCDGSIIRSLEGSDVAAVN 341
               +   P +V+              +I  + NK++  ++     ++  +     + + 
Sbjct: 786 FFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVL-LFDIHTSGLLAEIHTGHHSTIQ 844
Query: 342 CVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADG 401
             DF       +   +   V++W     +      GH + +  +  SPD    ++ S D 
Sbjct: 845 YCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQ 904
Query: 402 GIFLW 406
            I +W
Sbjct: 905 TIRVW 909

>pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 301 AYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFL--TGGAD 358
           A+   +  + TCS +K +  W++  G ++ + +      VNC  F +   + L  TG  D
Sbjct: 664 AFSSDDSYIATCSADKKVKIWDSATGKLVHTYD-EHSEQVNCCHFTNKSNHLLLATGSND 722
Query: 359 QIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLW 406
             +K+W   +        GH  S+   + SPD +++ S SADG + LW
Sbjct: 723 FFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLW 770

>pdb|3RFG|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P63 Length = 319

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 85/211 (40%), Gaps = 11/211 (5%)
Query: 208 HNRGVTALAITQDGTRLLSGGGEGQVRI-WKLTRESQSLQCVLKEHTSSVSVIQ---IKS 263
           HN  VT+LA +     LL      +  I WKLT + Q     ++       ++Q   + +
Sbjct: 16  HNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTA 75
Query: 264 DSKEAMSASTDGTCVLWDLIK-STRXXXXXXXXXXXXAAYHPSEVQLITCSTNKMIDYWE 322
           D   A+SAS D T  LWD+    T                      +I+ S +K I  W 
Sbjct: 76  DGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVW- 134
Query: 323 TCDGSIIRSLEG-----SDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIG 377
           T  G  + +L G     S V  V      DD    ++ G D++VK W   +       IG
Sbjct: 135 TIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIG 194
Query: 378 HAASITKIKISPDKKVIVSVSADGGIFLWTF 408
           H ++I  +  SPD  +I S   DG I LW  
Sbjct: 195 HNSNINTLTASPDGTLIASAGKDGEIMLWNL 225

>pdb|3RFH|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P21 Length = 319

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 85/211 (40%), Gaps = 11/211 (5%)
Query: 208 HNRGVTALAITQDGTRLLSGGGEGQVRI-WKLTRESQSLQCVLKEHTSSVSVIQ---IKS 263
           HN  VT+LA +     LL      +  I WKLT + Q     ++       ++Q   + +
Sbjct: 16  HNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTA 75
Query: 264 DSKEAMSASTDGTCVLWDLIK-STRXXXXXXXXXXXXAAYHPSEVQLITCSTNKMIDYWE 322
           D   A+SAS D T  LWD+    T                      +I+ S +K I  W 
Sbjct: 76  DGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVW- 134
Query: 323 TCDGSIIRSLEG-----SDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIG 377
           T  G  + +L G     S V  V      DD    ++ G D++VK W   +       IG
Sbjct: 135 TIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIG 194
Query: 378 HAASITKIKISPDKKVIVSVSADGGIFLWTF 408
           H ++I  +  SPD  +I S   DG I LW  
Sbjct: 195 HNSNINTLTASPDGTLIASAGKDGEIMLWNL 225

>pdb|3IZB|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome Length = 319

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 85/211 (40%), Gaps = 11/211 (5%)
Query: 208 HNRGVTALAITQDGTRLLSGGGEGQVRI-WKLTRESQSLQCVLKEHTSSVSVIQ---IKS 263
           HN  VT+LA +     LL      +  I WKLT + Q     ++       ++Q   + +
Sbjct: 16  HNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTA 75
Query: 264 DSKEAMSASTDGTCVLWDLIK-STRXXXXXXXXXXXXAAYHPSEVQLITCSTNKMIDYWE 322
           D   A+SAS D T  LWD+    T                      +I+ S +K I  W 
Sbjct: 76  DGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVW- 134
Query: 323 TCDGSIIRSLEG-----SDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIG 377
           T  G  + +L G     S V  V      DD    ++ G D++VK W   +       IG
Sbjct: 135 TIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIG 194
Query: 378 HAASITKIKISPDKKVIVSVSADGGIFLWTF 408
           H ++I  +  SPD  +I S   DG I LW  
Sbjct: 195 HNSNINTLTASPDGTLIASAGKDGEIMLWNL 225

>pdb|3JYV|R Chain R, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution Length = 313

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 85/211 (40%), Gaps = 11/211 (5%)
Query: 208 HNRGVTALAITQDGTRLLSGGGEGQVRI-WKLTRESQSLQCVLKEHTSSVSVIQ---IKS 263
           HN  VT+LA +     LL      +  I WKLT + Q     ++       ++Q   + +
Sbjct: 10  HNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTA 69
Query: 264 DSKEAMSASTDGTCVLWDLIK-STRXXXXXXXXXXXXAAYHPSEVQLITCSTNKMIDYWE 322
           D   A+SAS D T  LWD+    T                      +I+ S +K I  W 
Sbjct: 70  DGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVW- 128
Query: 323 TCDGSIIRSLEG-----SDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIG 377
           T  G  + +L G     S V  V      DD    ++ G D++VK W   +       IG
Sbjct: 129 TIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIG 188
Query: 378 HAASITKIKISPDKKVIVSVSADGGIFLWTF 408
           H ++I  +  SPD  +I S   DG I LW  
Sbjct: 189 HNSNINTLTASPDGTLIASAGKDGEIMLWNL 219

>pdb|1TRJ|A Chain A, Homology Model Of Yeast Rack1 Protein Fitted Into 11.7a Cryo-em Map Of Yeast 80s Ribosome Length = 314

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 85/211 (40%), Gaps = 11/211 (5%)
Query: 208 HNRGVTALAITQDGTRLLSGGGEGQVRI-WKLTRESQSLQCVLKEHTSSVSVIQ---IKS 263
           HN  VT+LA +     LL      +  I WKLT + Q     ++       ++Q   + +
Sbjct: 16  HNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTA 75
Query: 264 DSKEAMSASTDGTCVLWDLIK-STRXXXXXXXXXXXXAAYHPSEVQLITCSTNKMIDYWE 322
           D   A+SAS D T  LWD+    T                      +I+ S +K I  W 
Sbjct: 76  DGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVW- 134
Query: 323 TCDGSIIRSLEG-----SDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIG 377
           T  G  + +L G     S V  V      DD    ++ G D++VK W   +       IG
Sbjct: 135 TIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIG 194
Query: 378 HAASITKIKISPDKKVIVSVSADGGIFLWTF 408
           H ++I  +  SPD  +I S   DG I LW  
Sbjct: 195 HNSNINTLTASPDGTLIASAGKDGEIMLWNL 225

>pdb|3FRX|A Chain A, Crystal Structure Of The Yeast Orthologue Of Rack1, Asc1. Length = 319

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 85/211 (40%), Gaps = 11/211 (5%)
Query: 208 HNRGVTALAITQDGTRLLSGGGEGQVRI-WKLTRESQSLQCVLKEHTSSVSVIQ---IKS 263
           HN  VT+LA +     LL      +  I WKLT + Q     ++       ++Q   + +
Sbjct: 16  HNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTA 75
Query: 264 DSKEAMSASTDGTCVLWDLIK-STRXXXXXXXXXXXXAAYHPSEVQLITCSTNKMIDYWE 322
           D   A+SAS D T  LWD+    T                      +I+ S +K I  W 
Sbjct: 76  DGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVXSVDIDKKASXIISGSRDKTIKVW- 134
Query: 323 TCDGSIIRSLEG-----SDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIG 377
           T  G  + +L G     S V  V      DD    ++ G D+ VK W   +       IG
Sbjct: 135 TIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKXVKAWNLNQFQIEADFIG 194
Query: 378 HAASITKIKISPDKKVIVSVSADGGIFLWTF 408
           H ++I  +  SPD  +I S   DG I LW  
Sbjct: 195 HNSNINTLTASPDGTLIASAGKDGEIXLWNL 225

>pdb|2XZM|R Chain R, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 1 Length = 343

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 90/220 (40%), Gaps = 23/220 (10%)
Query: 219 QDGTRLLSGGGEGQVRIWKLTRESQS-----LQCVLKEHTSSVSVIQIKSDSKEAMSAST 273
           +D   L+SG  +  V IWKL  E Q+         L  H   VS + +  ++  A+S+S 
Sbjct: 37  EDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSW 96
Query: 274 DGTCVLWDL-IKSTRXXXXXXXXXXXXAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSL 332
           D T  LWDL   +T              A+ P   Q+++    + I  W         S 
Sbjct: 97  DKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSA 156
Query: 333 EGSDVA-AVNCVDFVDDGK----------YFLTGGADQIVKMWMYREGVPCFVGIGHAAS 381
           E  + +  V+CV +    K          YF + G D  +K+W     +  +    H ++
Sbjct: 157 EKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIR-YTFKAHESN 215
Query: 382 ITKIKISPDKKVIVSVSADGGIFLW-----TFPELEDDVG 416
           +  + ISP+ K I +   D  + +W     T+P+ E D G
Sbjct: 216 VNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFDAG 255

>pdb|3ZEY|7 Chain 7, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 318

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/254 (21%), Positives = 104/254 (40%), Gaps = 11/254 (4%)
Query: 123 HTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAIL 182
           H++ + D+    N +   +    + +R+W+++      +          + F+ D + I+
Sbjct: 66  HSAFVSDVALSNNGNFAVSASWDHSLRLWNLQNGQCQYKFLGHTKDVLSVAFSPDNRQIV 125
Query: 183 SGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQ--DGTRLLSGGGEGQVRIWKLTR 240
           SG  D  +R +  +   +  +   AH   V+ +  +   D   ++SGG +  V++W L  
Sbjct: 126 SGGRDNALRVWNVKGECMHTLSRGAHTDWVSCVRFSPSLDAPVIVSGGWDNLVKVWDLA- 184
Query: 241 ESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRXXXXXXXXXXXXA 300
            +  L   LK HT+ V+ + +  D     S+  DG   LWDL K                
Sbjct: 185 -TGRLVTDLKGHTNYVTSVTVSPDGSLCASSDKDGVARLWDLTKGEALSEMAAGAPINQI 243
Query: 301 AYHPSEVQLITCSTNKMIDYWETCDGSIIRSL----EGSDVAAVNCVD--FVDDGKYFLT 354
            + P+   +   +T K I  ++  +  II  L    +GS      CV   +  DG    +
Sbjct: 244 CFSPNRYWMC-AATEKGIRIFDLENKDIIVELAPEHQGSKKIVPECVSIAWSADGSTLYS 302
Query: 355 GGADQIVKMWMYRE 368
           G  D ++++W   E
Sbjct: 303 GYTDNVIRVWGVSE 316

>pdb|3ZEY|7 Chain 7, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 318

Iteration: 1
 Score = 58.5 bits (140), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 15/220 (6%)
Query: 207 AHNRGVTALAITQD---GTRLLSGGGEGQVRIWKLTRESQSLQCV-------LKEHTSSV 256
            H   VT+LA  Q     T+++S   +  +  W    +  S +C        L+ H++ V
Sbjct: 11  GHRGWVTSLACPQTPETATKVVSTSRDKTLLSWGPNPDRHSSECSYGLPDRRLEGHSAFV 70
Query: 257 SVIQIKSDSKEAMSASTDGTCVLWDLIKST-RXXXXXXXXXXXXAAYHPSEVQLITCSTN 315
           S + + ++   A+SAS D +  LW+L     +             A+ P   Q+++   +
Sbjct: 71  SDVALSNNGNFAVSASWDHSLRLWNLQNGQCQYKFLGHTKDVLSVAFSPDNRQIVSGGRD 130
Query: 316 KMIDYWETCDGSIIRSL-EGSDVAAVNCVDFVD--DGKYFLTGGADQIVKMWMYREGVPC 372
             +  W    G  + +L  G+    V+CV F    D    ++GG D +VK+W    G   
Sbjct: 131 NALRVWNV-KGECMHTLSRGAHTDWVSCVRFSPSLDAPVIVSGGWDNLVKVWDLATGRLV 189
Query: 373 FVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELE 412
               GH   +T + +SPD  +  S   DG   LW   + E
Sbjct: 190 TDLKGHTNYVTSVTVSPDGSLCASSDKDGVARLWDLTKGE 229

>pdb|1ERJ|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1 Length = 393

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/271 (20%), Positives = 109/271 (40%), Gaps = 28/271 (10%)
Query: 166 NMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLL 225
           ++    + F+ DGK + +G  D  IR +  ++ K+  I+   H + + +L     G +L+
Sbjct: 123 DLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMIL-QGHEQDIYSLDYFPSGDKLV 181
Query: 226 SGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWD---- 281
           SG G+  VRIW L     SL   +++  ++V+V     D K   + S D    +WD    
Sbjct: 182 SGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVS--PGDGKYIAAGSLDRAVRVWDSETG 239
Query: 282 ----LIKSTRXXXXXXXXXXXXAAYHPSEVQLITCSTNKMIDYWETCDG-----SIIRSL 332
                + S                +      +++ S ++ +  W   +      S   + 
Sbjct: 240 FLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNS 299
Query: 333 EGSDVAAVNCVDFV------DDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIK 386
              +V  +   DFV       + +Y L+G  D+ V  W  + G P  +  GH  S+  + 
Sbjct: 300 GTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVA 359
Query: 387 IS------PDKKVIVSVSADGGIFLWTFPEL 411
           ++      P+  V  + S D    +W + ++
Sbjct: 360 VANGSSLGPEYNVFATGSGDCKARIWKYKKI 390

>pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 66/307 (21%), Positives = 128/307 (41%), Gaps = 26/307 (8%)
Query: 82  SGISSLQYNPVNNKVFVGTVNCEIFLIDMNSG-FTLTLVNTCHTSAIYDLQFPVNFSSVF 140
           S ++ + ++PV + +   + +  I + D  +G F  TL    HT ++ D+ F  +   + 
Sbjct: 109 SPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKG--HTDSVQDISFD-HSGKLL 165
Query: 141 ATCSKN-DIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGK 199
           A+CS +  I++W  +    +  +   +   + +    +G  I+S   D  I+ +  Q+G 
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGY 225
Query: 200 LKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIW---------KLTRESQSLQCVLK 250
                   H   V  +   QDGT + S   +  VR+W         +L      ++C+  
Sbjct: 226 CVKTF-TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISW 284
Query: 251 EHTSSVSVIQ--IKSDSKEA-------MSASTDGTCVLWDLIKST-RXXXXXXXXXXXXA 300
              SS S I     S++K++       +S S D T  +WD+                   
Sbjct: 285 APESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGV 344
Query: 301 AYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQI 360
            +H     +++C+ +K +  W+  +   +++L   +   V  +DF     Y +TG  DQ 
Sbjct: 345 LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHE-HFVTSLDFHKTAPYVVTGSVDQT 403
Query: 361 VKMWMYR 367
           VK+W  R
Sbjct: 404 VKVWECR 410

>pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/290 (21%), Positives = 104/290 (35%), Gaps = 5/290 (1%)
Query: 226 SGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKS 285
           SGG  GQ R  K        +  L  H S V+ +         +SAS D T  +WD    
Sbjct: 81  SGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG 140
Query: 286 --TRXXXXXXXXXXXXAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCV 343
              R            +  H  ++ L +CS +  I  W+      IR++ G D   V+ V
Sbjct: 141 DFERTLKGHTDSVQDISFDHSGKL-LASCSADMTIKLWDFQGFECIRTMHGHD-HNVSSV 198
Query: 344 DFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGI 403
             + +G + ++   D+ +KMW  + G       GH   +  ++ + D  +I S S D  +
Sbjct: 199 SIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTV 258
Query: 404 FLWTFPELEDDVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAYHPSEVQLITCSTNK 463
            +W     E                                           L++ S +K
Sbjct: 259 RVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 464 MIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLY 513
            I  W+   G  + +L G D   V  V F   GK+ L+   D+ +++  Y
Sbjct: 319 TIKMWDVSTGMCLMTLVGHD-NWVRGVLFHSGGKFILSCADDKTLRVWDY 367

>pdb|1P22|A Chain A, Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex: Destruction Motif Binding And Lysine Specificity On The Scfbeta-Trcp1 Ubiquitin Ligase Length = 435

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 100/203 (49%), Gaps = 19/203 (9%)
Query: 87  LQYNPVNNKVFVGTVNCEIFLIDMNSGFTL-TLVNTCHTSAIYDLQFPVNFSSVFATCSK 145
           LQY+     +  G+ +  + + D+N+G  L TL++ C   A+  L+F    + +  TCSK
Sbjct: 179 LQYD--ERVIITGSSDSTVRVWDVNTGEMLNTLIHHC--EAVLHLRFN---NGMMVTCSK 231
Query: 146 N-DIRIWSVRTLNEL-LRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFI 203
           +  I +W + +  ++ LR  ++    A  V  +D K I+S   D  I+ +   + +    
Sbjct: 232 DRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRT 291
Query: 204 IPNAHNRGVTALAITQDGTRLL-SGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIK 262
           + N H RG+  L   Q   RL+ SG  +  +R+W +  E  +   VL+ H   V  I+  
Sbjct: 292 L-NGHKRGIACL---QYRDRLVVSGSSDNTIRLWDI--ECGACLRVLEGHEELVRCIRF- 344
Query: 263 SDSKEAMSASTDGTCVLWDLIKS 285
            D+K  +S + DG   +WDL+ +
Sbjct: 345 -DNKRIVSGAYDGKIKVWDLVAA 366

>pdb|1P22|A Chain A, Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex: Destruction Motif Binding And Lysine Specificity On The Scfbeta-Trcp1 Ubiquitin Ligase Length = 435

Iteration: 1
 Score = 55.5 bits (132), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 17/192 (8%)
Query: 220 DGTRLLSGGGEGQVRIWKLTRESQSLQC--VLKEHTSSVSVIQIKSDSKEAMSASTDGTC 277
           D  +++SG  +  ++IW    +  +L+C  +L  HT SV  +Q   D +  ++ S+D T 
Sbjct: 142 DDQKIVSGLRDNTIKIW----DKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTV 195
Query: 278 VLWDLIKSTRXXXXXXXXXXXXAAYHPSEVQLITCSTNKMIDYWETC---DGSIIRSLEG 334
            +WD + +                   +   ++TCS ++ I  W+     D ++ R L G
Sbjct: 196 RVWD-VNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVG 254
Query: 335 SDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVI 394
              AAVN VDF  D KY ++   D+ +K+W            GH   I  ++     +++
Sbjct: 255 HR-AAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLV 309
Query: 395 VSVSADGGIFLW 406
           VS S+D  I LW
Sbjct: 310 VSGSSDNTIRLW 321

>pdb|1GXR|A Chain A, Wd40 Region Of Human Groucho/tle1 Length = 337

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 72/173 (41%), Gaps = 12/173 (6%)
Query: 206 NAHNRGVTALAIT-QDGTRLLSGGGEGQVRIWKLTRESQ-----SLQCVLKEHTSSVSVI 259
           N  N G    A+T  + TR +  GG+G V++W ++          L C+ +++   +   
Sbjct: 46  NTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNY--IRSC 103
Query: 260 QIKSDSKEAMSASTDGTCVLWDLIKST---RXXXXXXXXXXXXAAYHPSEVQLITCSTNK 316
           ++  D    +      T  +WDL   T   +             A  P      +C ++ 
Sbjct: 104 KLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG 163
Query: 317 MIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREG 369
            I  W+  + +++R  +G    A +C+D  +DG    TGG D  V+ W  REG
Sbjct: 164 NIAVWDLHNQTLVRQFQGHTDGA-SCIDISNDGTKLWTGGLDNTVRSWDLREG 215

>pdb|3OW8|A Chain A, Crystal Structure Of The Wd Repeat-Containing Protein 61 Length = 321

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/215 (25%), Positives = 89/215 (41%), Gaps = 7/215 (3%)
Query: 194 TPQSGKLKFIIPNAHNRGVTALAI----TQDGTRLLSGGGEGQVRIWKLTRESQSLQCVL 249
           T Q G L F    AH+  + ++A      ++   +++G  +  V++WK   E   LQ  L
Sbjct: 18  TNQYGIL-FKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSL 76
Query: 250 KEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRXXXXXXXXXXXXA-AYHPSEVQ 308
           + H   V  + I      A S+S D    LWDL    +              A+ P    
Sbjct: 77  EGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQY 136
Query: 309 LITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYRE 368
           L T +    ++ +    G    SL+ +    +  + +  DGKY  +G  D I+ ++    
Sbjct: 137 LATGTHVGKVNIFGVESGKKEYSLD-TRGKFILSIAYSPDGKYLASGAIDGIINIFDIAT 195
Query: 369 GVPCFVGIGHAASITKIKISPDKKVIVSVSADGGI 403
           G       GHA  I  +  SPD +++V+ S DG I
Sbjct: 196 GKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYI 230

>pdb|1NR0|A Chain A, Two Seven-Bladed Beta-Propeller Domains Revealed By The Structure Of A C. Elegans Homologue Of Yeast Actin Interacting Protein 1 (Aip1). Length = 611

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Query: 117 TLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMIC-ACIVFT 175
           +L N  H+ +++ L +  + + + +  +   I+IW+V TL     I V   I    +   
Sbjct: 232 SLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGII 291
Query: 176 YDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRI 235
           +  +A++S   +GFI    P+ G +   +   HN+ +TAL+ + DG  L S   EG +  
Sbjct: 292 WTKQALVSISANGFINFVNPELGSID-QVRYGHNKAITALSSSADGKTLFSADAEGHINS 350
Query: 236 WKLT 239
           W ++
Sbjct: 351 WDIS 354

>pdb|1NR0|A Chain A, Two Seven-Bladed Beta-Propeller Domains Revealed By The Structure Of A C. Elegans Homologue Of Yeast Actin Interacting Protein 1 (Aip1). Length = 611

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/217 (22%), Positives = 82/217 (37%), Gaps = 14/217 (6%)
Query: 208 HNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKE 267
           H+   T    +  G    SG   G VRIW  T+ +  L+  +   +  V  I   S+SK 
Sbjct: 58  HSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKR 117
Query: 268 AMSASTD----GTCVLWDLIKSTRXXXXXXXXXXXXAAYHPSE-VQLITCSTNKMIDYWE 322
             +        G   L+D   ++               + PS   ++I+ S +  +  +E
Sbjct: 118 IAAVGEGRERFGHVFLFD-TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFE 176
Query: 323 TCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFV-------G 375
                  +S  G     V+ V +  DG  F + G D  + ++   +G    V        
Sbjct: 177 GPPFKF-KSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKN 235
Query: 376 IGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELE 412
           + H+ S+  +  SPD   I S SAD  I +W    L+
Sbjct: 236 VAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLK 272

>pdb|1R5M|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Sif2 Length = 425

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 80/195 (41%), Gaps = 31/195 (15%)
Query: 212 VTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSA 271
           VT LA + DG  +++G   G++R+W  T    +L  VL  H + +  ++   D    +S 
Sbjct: 111 VTCLAWSHDGNSIVTGVENGELRLWNKT---GALLNVLNFHRAPIVSVKWNKDGTHIISM 167
Query: 272 STDGTCVLWDLIKSTRXXXXXXXXXXXXAAYHPSEVQLITCSTNKMIDYWETCDGSIIRS 331
             +   +LW++I  T                             +  +  ET   SI   
Sbjct: 168 DVENVTILWNVISGT---------------------------VMQHFELKETGGSSINAE 200
Query: 332 LEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDK 391
               D +    V++VDD K+ + G    I  ++   E  P    IGH   I+ ++ +   
Sbjct: 201 NHSGDGSLGVDVEWVDDDKFVIPGPKGAIF-VYQITEKTPTGKLIGHHGPISVLEFNDTN 259
Query: 392 KVIVSVSADGGIFLW 406
           K+++S S DG + +W
Sbjct: 260 KLLLSASDDGTLRIW 274

>pdb|2PBI|B Chain B, The Multifunctional Nature Of Gbeta5RGS9 REVEALED FROM ITS CRYSTAL Structure Length = 354

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 95/245 (38%), Gaps = 50/245 (20%)
Query: 166 NMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTAL----AITQDG 221
           N + AC  FT     IL+   DG    +  +SG+L   + + H  G   L    A ++ G
Sbjct: 155 NYLSAC-SFTNSDMQILTASGDGTCALWDVESGQL---LQSFHGHGADVLCLDLAPSETG 210
Query: 222 TRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWD 281
              +SGG + +  +W + R  Q +Q   + H S V+ ++         S S D TC L+D
Sbjct: 211 NTFVSGGCDKKAMVWDM-RSGQCVQ-AFETHESDVNSVRYYPSGDAFASGSDDATCRLYD 268
Query: 282 LIKSTRXXXXXXXXXXXXAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVN 341
           L ++ R                  EV + +                     + S +   +
Sbjct: 269 L-RADR------------------EVAIYS---------------------KESIIFGAS 288
Query: 342 CVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADG 401
            VDF   G+    G  D  + +W   +G    +  GH   ++ +++SPD     S S D 
Sbjct: 289 SVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDH 348
Query: 402 GIFLW 406
            + +W
Sbjct: 349 TLRVW 353

>pdb|3MKQ|A Chain A, Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subcomplex Of The Copi Vesicular Coat Length = 814

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/271 (21%), Positives = 99/271 (36%), Gaps = 46/271 (16%)
Query: 139 VFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSG 198
           V  T     + IW+  T  E+  I V         F      I+ G +D  IR F   +G
Sbjct: 28  VLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG 87
Query: 199 KLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSV 258
           + K +   AH   + ++A+      +LSG  +  V++W     + +L+   + H   V  
Sbjct: 88  E-KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNW-ENNWALEQTFEGHEHFVMC 145
Query: 259 IQIK-SDSKEAMSASTDGTCVLWDLIKSTRXXXXXXXXXXXXAAYHPSEVQLITCSTNKM 317
           +     D     S   D T  +W L +ST                 P+     T +T + 
Sbjct: 146 VAFNPKDPSTFASGCLDRTVKVWSLGQST-----------------PN----FTLTTGQE 184
Query: 318 IDYWETCDGSIIRSLEGSDVAAVNCVDF--VDDGKYFLTGGADQIVKMWMYREGVPCFVG 375
                                 VN VD+  + D  Y +T   D  +K+W Y+        
Sbjct: 185 --------------------RGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATL 224
Query: 376 IGHAASITKIKISPDKKVIVSVSADGGIFLW 406
            GH ++++     P   +I+S S DG + +W
Sbjct: 225 EGHMSNVSFAVFHPTLPIIISGSEDGTLKIW 255

>pdb|2YNP|A Chain A, Yeast Betaprime Cop 1-604 With Ktktn Motif Length = 604

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/271 (21%), Positives = 99/271 (36%), Gaps = 46/271 (16%)
Query: 139 VFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSG 198
           V  T     + +W+  T  E+  I V         F      I+ G +D  IR F   +G
Sbjct: 28  VLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG 87
Query: 199 KLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSV 258
           + K +   AH   + ++A+      +LSG  +  V++W     + +L+   + H   V  
Sbjct: 88  E-KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNW-ENNWALEQTFEGHEHFVMC 145
Query: 259 IQIK-SDSKEAMSASTDGTCVLWDLIKSTRXXXXXXXXXXXXAAYHPSEVQLITCSTNKM 317
           +     D     S   D T  +W L +ST                 P+     T +T + 
Sbjct: 146 VAFNPKDPSTFASGCLDRTVKVWSLGQST-----------------PN----FTLTTGQE 184
Query: 318 IDYWETCDGSIIRSLEGSDVAAVNCVDF--VDDGKYFLTGGADQIVKMWMYREGVPCFVG 375
                                 VN VD+  + D  Y +T   D  +K+W Y+        
Sbjct: 185 --------------------RGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATL 224
Query: 376 IGHAASITKIKISPDKKVIVSVSADGGIFLW 406
            GH ++++     P   +I+S S DG + +W
Sbjct: 225 EGHMSNVSFAVFHPTLPIIISGSEDGTLKIW 255

>pdb|2YNO|A Chain A, Yeast Betaprime Cop 1-304h6 Length = 310

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/271 (20%), Positives = 95/271 (35%), Gaps = 46/271 (16%)
Query: 139 VFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSG 198
           V  T     + +W+  T  E+  I V         F      I+ G +D  IR F   +G
Sbjct: 28  VLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG 87
Query: 199 KLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSV 258
           + K +   AH   + ++A+      +LSG  +  V++W     + +L+   + H   V  
Sbjct: 88  E-KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNW-ENNWALEQTFEGHEHFVMC 145
Query: 259 IQIK-SDSKEAMSASTDGTCVLWDLIKSTRXXXXXXXXXXXXAAYHPSEVQLITCSTNKM 317
           +     D     S   D T  +W L +ST                               
Sbjct: 146 VAFNPKDPSTFASGCLDRTVKVWSLGQSTPNF---------------------------- 177
Query: 318 IDYWETCDGSIIRSLEGSDVAAVNCVDF--VDDGKYFLTGGADQIVKMWMYREGVPCFVG 375
                        +L       VN VD+  + D  Y +T   D  +K+W Y+        
Sbjct: 178 -------------TLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATL 224
Query: 376 IGHAASITKIKISPDKKVIVSVSADGGIFLW 406
            GH ++++     P   +I+S S DG + +W
Sbjct: 225 EGHMSNVSFAVFHPTLPIIISGSEDGTLKIW 255

>pdb|2YNN|A Chain A, Yeast Betaprime Cop 1-304 With Ktktn Motif Length = 304

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/271 (20%), Positives = 95/271 (35%), Gaps = 46/271 (16%)
Query: 139 VFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSG 198
           V  T     + +W+  T  E+  I V         F      I+ G +D  IR F   +G
Sbjct: 28  VLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG 87
Query: 199 KLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSV 258
           + K +   AH   + ++A+      +LSG  +  V++W     + +L+   + H   V  
Sbjct: 88  E-KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNW-ENNWALEQTFEGHEHFVMC 145
Query: 259 IQIK-SDSKEAMSASTDGTCVLWDLIKSTRXXXXXXXXXXXXAAYHPSEVQLITCSTNKM 317
           +     D     S   D T  +W L +ST                               
Sbjct: 146 VAFNPKDPSTFASGCLDRTVKVWSLGQSTPNF---------------------------- 177
Query: 318 IDYWETCDGSIIRSLEGSDVAAVNCVDF--VDDGKYFLTGGADQIVKMWMYREGVPCFVG 375
                        +L       VN VD+  + D  Y +T   D  +K+W Y+        
Sbjct: 178 -------------TLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATL 224
Query: 376 IGHAASITKIKISPDKKVIVSVSADGGIFLW 406
            GH ++++     P   +I+S S DG + +W
Sbjct: 225 EGHMSNVSFAVFHPTLPIIISGSEDGTLKIW 255

>pdb|3FM0|A Chain A, Crystal Structure Of Wd40 Protein Ciao1 Length = 345

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 81/213 (38%), Gaps = 12/213 (5%)
Query: 204 IPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKE-HTSSVSVIQIK 262
           +P   +     LA    GT L S GG+ ++RIW    +S   + VL E H  +V  +   
Sbjct: 11  VPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWS 70
Query: 263 SDSKEAMSASTDGTCVLWDLIK---STRXXXXXXXXXXXXAAYHPSEVQLITCSTNKMID 319
                  SAS D T  +W   +                   A+ PS   L TCS +K + 
Sbjct: 71  PCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVW 130
Query: 320 YWETCDGSIIR--SLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYRE----GVPCF 373
            WE  +       S+  S    V  V +    +   +   D  VK  +YRE     V C 
Sbjct: 131 VWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVK--LYREEEDDWVCCA 188
Query: 374 VGIGHAASITKIKISPDKKVIVSVSADGGIFLW 406
              GH +++  +   P  + + S S D  + +W
Sbjct: 189 TLEGHESTVWSLAFDPSGQRLASCSDDRTVRIW 221

>pdb|1GOT|B Chain B, Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimera And The Gt-Beta-Gamma Subunits Length = 340

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 74/181 (40%), Gaps = 11/181 (6%)
Query: 234 RIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRXXXXXX 293
           RI   TR +      L+ H + +  +   +DS+  +SAS DG  ++WD   + +      
Sbjct: 42  RIQMRTRRT------LRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPL 95
Query: 294 XXX-XXXAAYHPSEVQLITCSTNKMIDYW--ETCDGSIIRSLE-GSDVAAVNCVDFVDDG 349
                   AY PS   +     + +   +  +T +G++  S E       ++C  F+DD 
Sbjct: 96  RSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN 155
Query: 350 KYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFP 409
           +  +T   D    +W    G       GH   +  + ++PD ++ VS + D    LW   
Sbjct: 156 Q-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVR 214
Query: 410 E 410
           E
Sbjct: 215 E 215

>pdb|1A0R|B Chain B, Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-Gamma Length = 340

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 74/181 (40%), Gaps = 11/181 (6%)
Query: 234 RIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRXXXXXX 293
           RI   TR +      L+ H + +  +   +DS+  +SAS DG  ++WD   + +      
Sbjct: 42  RIQMRTRRT------LRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPL 95
Query: 294 XXX-XXXAAYHPSEVQLITCSTNKMIDYW--ETCDGSIIRSLE-GSDVAAVNCVDFVDDG 349
                   AY PS   +     + +   +  +T +G++  S E       ++C  F+DD 
Sbjct: 96  RSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN 155
Query: 350 KYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFP 409
           +  +T   D    +W    G       GH   +  + ++PD ++ VS + D    LW   
Sbjct: 156 Q-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVR 214
Query: 410 E 410
           E
Sbjct: 215 E 215

>pdb|2OVP|B Chain B, Structure Of The Skp1-Fbw7 Complex Length = 445

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 56/234 (23%), Positives = 100/234 (42%), Gaps = 22/234 (9%)
Query: 181 ILSGWNDGFIRCFTP----QSGKLKF--IIPNAHNRGVTALAITQDGTRLLSGGGEGQVR 234
           I S W   +IR        + G+LK   ++    +  +T L     G R++SG  +  ++
Sbjct: 85  IHSPWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLK 142
Query: 235 IWKLTRESQSLQCV--LKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRXXXXX 292
           +W     + + +C+  L  HT  V   Q++ +    +S STD T  +W+  ++       
Sbjct: 143 VW----SAVTGKCLRTLVGHTGGVWSSQMRDNI--IISGSTDRTLKVWN-AETGECIHTL 195
Query: 293 XXXXXXXAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYF 352
                     H  E ++++ S +  +  W+   G  +  L G  VAAV CV +  DG+  
Sbjct: 196 YGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGH-VAAVRCVQY--DGRRV 252
Query: 353 LTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLW 406
           ++G  D +VK+W            GH   +  ++   D   +VS S D  I +W
Sbjct: 253 VSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVW 304

>pdb|3SN6|B Chain B, Crystal Structure Of The Beta2 Adrenergic Receptor-Gs Protein Complex Length = 351

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 74/181 (40%), Gaps = 11/181 (6%)
Query: 234 RIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRXXXXXX 293
           RI   TR +      L+ H + +  +   +DS+  +SAS DG  ++WD   + +      
Sbjct: 53  RIQMRTRRT------LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL 106
Query: 294 XXX-XXXAAYHPSEVQLITCSTNKMIDYW--ETCDGSIIRSLE-GSDVAAVNCVDFVDDG 349
                   AY PS   +     + +   +  +T +G++  S E       ++C  F+DD 
Sbjct: 107 RSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN 166
Query: 350 KYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFP 409
           +  +T   D    +W    G       GH   +  + ++PD ++ VS + D    LW   
Sbjct: 167 Q-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVR 225
Query: 410 E 410
           E
Sbjct: 226 E 226

>pdb|2BCJ|B Chain B, Crystal Structure Of G Protein-coupled Receptor Kinase 2 In Complex With Galpha-q And Gbetagamma Subunits Length = 340

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 74/181 (40%), Gaps = 11/181 (6%)
Query: 234 RIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRXXXXXX 293
           RI   TR +      L+ H + +  +   +DS+  +SAS DG  ++WD   + +      
Sbjct: 42  RIQMRTRRT------LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL 95
Query: 294 XXX-XXXAAYHPSEVQLITCSTNKMIDYW--ETCDGSIIRSLE-GSDVAAVNCVDFVDDG 349
                   AY PS   +     + +   +  +T +G++  S E       ++C  F+DD 
Sbjct: 96  RSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN 155
Query: 350 KYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFP 409
           +  +T   D    +W    G       GH   +  + ++PD ++ VS + D    LW   
Sbjct: 156 Q-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVR 214
Query: 410 E 410
           E
Sbjct: 215 E 215

>pdb|1GG2|B Chain B, G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Beta_1 Gamma_2 With Gdp Bound Length = 340

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 74/181 (40%), Gaps = 11/181 (6%)
Query: 234 RIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRXXXXXX 293
           RI   TR +      L+ H + +  +   +DS+  +SAS DG  ++WD   + +      
Sbjct: 42  RIQMRTRRT------LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL 95
Query: 294 XXX-XXXAAYHPSEVQLITCSTNKMIDYW--ETCDGSIIRSLE-GSDVAAVNCVDFVDDG 349
                   AY PS   +     + +   +  +T +G++  S E       ++C  F+DD 
Sbjct: 96  RSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN 155
Query: 350 KYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFP 409
           +  +T   D    +W    G       GH   +  + ++PD ++ VS + D    LW   
Sbjct: 156 Q-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVR 214
Query: 410 E 410
           E
Sbjct: 215 E 215

>pdb|3ACP|A Chain A, Crystal Structure Of Yeast Rpn14, A Chaperone Of The 19s Reg Particle Of The Proteasome Length = 417

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 42/80 (52%)
Query: 327 SIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIK 386
           ++ R ++ + V+ +  + F   G+  ++   D  +K+W  ++G      IGH A++T I 
Sbjct: 126 NLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIA 185
Query: 387 ISPDKKVIVSVSADGGIFLW 406
           I    + ++S S DG I LW
Sbjct: 186 IIDRGRNVLSASLDGTIRLW 205

>pdb|3VL1|A Chain A, Crystal Structure Of Yeast Rpn14 Length = 420

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 42/80 (52%)
Query: 327 SIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIK 386
           ++ R ++ + V+ +  + F   G+  ++   D  +K+W  ++G      IGH A++T I 
Sbjct: 129 NLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIA 188
Query: 387 ISPDKKVIVSVSADGGIFLW 406
           I    + ++S S DG I LW
Sbjct: 189 IIDRGRNVLSASLDGTIRLW 208

>pdb|3IZ6|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome Length = 380

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/175 (21%), Positives = 71/175 (40%), Gaps = 13/175 (7%)
Query: 204 IPNAHNRGVTALAITQ-DGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIK 262
            P+ H   V +L+I   +    +SG  +  VR+W L   S++++     H   ++ ++  
Sbjct: 200 FPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVR-TYHGHEGDINSVKFF 258
Query: 263 SDSKEAMSASTDGTCVLWDLIKSTRXXXXXXXXXX--------XXAAYHPSEVQLITCST 314
            D +   + S DGTC L+D+    +                     A+  S   L    +
Sbjct: 259 PDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYS 318
Query: 315 NKMIDYWETCDGSII---RSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMY 366
           N     W+T    ++    +L+ S    ++C+    DG    TG  D+ +K+W +
Sbjct: 319 NGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAF 373

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	515
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	100.0
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	100.0
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	100.0
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	100.0
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	100.0
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	100.0
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	100.0
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	100.0
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	100.0
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	100.0
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	100.0
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	100.0
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	100.0
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	100.0
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	100.0
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	100.0
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	100.0
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	100.0
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	100.0
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	100.0
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	100.0
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	100.0
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	100.0
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	100.0
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	100.0
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	100.0
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	100.0
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	100.0
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	100.0
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	100.0
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	100.0
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	100.0
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	100.0
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	100.0
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	100.0
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	100.0
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	100.0
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	100.0
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	100.0
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	100.0
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	100.0
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	100.0
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	100.0
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	100.0
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	100.0
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	100.0
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	100.0
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	100.0
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	100.0
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	100.0
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	100.0
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	100.0
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	100.0
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	100.0
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	100.0
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	100.0
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	100.0
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	100.0
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	100.0
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	100.0
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	100.0
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	100.0
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	100.0
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	100.0
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	100.0
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	100.0
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	100.0
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	100.0
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	100.0
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	100.0
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	100.0
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	100.0
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	100.0
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	100.0
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	100.0
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	100.0
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	100.0
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	100.0
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	100.0
2pm7_B	297	Protein transport protein SEC13, protein transport	100.0
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	100.0
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	100.0
1k32_A	1045	Tricorn protease; protein degradation, substrate g	100.0
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	100.0
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	100.0
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	100.0
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	100.0
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	100.0
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	100.0
2pm7_B	297	Protein transport protein SEC13, protein transport	100.0
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	100.0
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	100.0
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	100.0
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	100.0
1k32_A	1045	Tricorn protease; protein degradation, substrate g	100.0
3jrp_A	379	Fusion protein of protein transport protein SEC13	100.0
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	100.0
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	100.0
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	100.0
3jrp_A	379	Fusion protein of protein transport protein SEC13	100.0
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	100.0
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	100.0
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	100.0
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	100.0
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	100.0
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	100.0
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	100.0
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	100.0
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	100.0
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	100.0
3jro_A	753	Fusion protein of protein transport protein SEC13	100.0
3jro_A	753	Fusion protein of protein transport protein SEC13	100.0
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	100.0
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	100.0
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	100.0
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	100.0
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	100.0
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	100.0
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	100.0
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	100.0
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	100.0
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	100.0
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	100.0
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	100.0
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.97
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.97
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.97
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.97
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.96
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.96
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.96
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.96
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.96
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.96
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.96
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.96
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.95
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.95
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.95
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.94
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.94
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.94
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.94
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.93
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.93
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.93
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.93
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.93
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.93
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.93
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.92
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.92
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.91
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.91
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.91
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.9
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.9
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.9
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.9
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.89
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.89
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.88
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.88
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.87
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.87
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.86
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.85
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.85
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.84
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.84
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.84
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.84
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.83
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.83
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	99.83
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.82
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.81
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.81
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.81
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	99.81
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.81
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	99.8
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.8
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.79
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.79
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.79
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.78
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	99.78
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.78
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.77
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.76
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	99.76
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.76
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	99.75
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.74
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.73
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.73
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.73
4a2l_A	795	BT_4663, two-component system sensor histidine kin	99.72
4a2l_A	795	BT_4663, two-component system sensor histidine kin	99.71
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.67
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.66
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	99.64
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.64
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.64
3v9f_A	781	Two-component system sensor histidine kinase/RESP	99.63
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	99.62
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	99.62
3v9f_A	781	Two-component system sensor histidine kinase/RESP	99.62
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.61
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	99.61
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.61
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	99.6
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.6
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	99.6
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	99.58
2qe8_A	343	Uncharacterized protein; structural genomics, join	99.58
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	99.58
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	99.57
2qe8_A	343	Uncharacterized protein; structural genomics, join	99.56
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	99.56
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	99.55
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	99.54
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	99.54
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	99.54
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	99.51
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.49
2ece_A	462	462AA long hypothetical selenium-binding protein;	99.47
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	99.46
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	99.44
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	99.43
2ece_A	462	462AA long hypothetical selenium-binding protein;	99.41
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	99.4
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	99.4
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	99.38
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	99.37
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	99.35
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	99.34
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	99.33
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	99.33
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	99.33
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	99.32
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	99.32
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	99.3
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	99.3
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	99.3
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	99.28
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	99.27
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	99.26
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	99.22
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	99.17
2p4o_A	306	Hypothetical protein; putative lactonase, structur	99.16
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	99.16
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	99.12
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	99.1
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	99.1
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	99.08
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	99.05
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	99.03
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	99.02
2p4o_A	306	Hypothetical protein; putative lactonase, structur	99.01
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	99.0
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	98.97
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	98.97
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	98.96
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	98.94
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	98.93
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	98.91
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	98.89
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	98.84
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	98.84
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	98.84
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	98.84
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	98.83
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	98.82
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	98.82
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	98.81
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	98.8
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.8
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.76
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.76
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	98.73
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.68
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	98.68
3kya_A	496	Putative phosphatase; structural genomics, joint c	98.67
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	98.67
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	98.57
3kya_A	496	Putative phosphatase; structural genomics, joint c	98.56
3ott_A	758	Two-component system sensor histidine kinase; beta	98.45
3ott_A	758	Two-component system sensor histidine kinase; beta	98.45
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	98.41
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	98.39
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	98.37
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	98.36
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	98.31
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	98.31
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	98.3
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	98.27
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	98.24
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	98.22
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	98.22
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	98.12
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	98.03
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	97.98
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	97.98
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	97.96
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	97.92
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	97.91
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	97.85
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	97.82
3sbq_A	638	Nitrous-oxide reductase; beta-propeller, cupredoxi	97.81
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	97.76
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	97.71
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	97.7
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	97.69
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	97.69
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	97.68
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	97.67
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	97.67
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	97.61
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	97.55
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	97.54
1xi4_A	1630	Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle	97.53
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	97.53
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	97.52
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	97.47
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	97.46
1xi4_A	1630	Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle	97.44
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	97.4
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	97.33
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	97.31
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	97.27
3sbq_A	638	Nitrous-oxide reductase; beta-propeller, cupredoxi	97.21
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	97.14
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	96.92
3s25_A	302	Hypothetical 7-bladed beta-propeller-like protein;	96.86
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	96.75
3s25_A	302	Hypothetical 7-bladed beta-propeller-like protein;	96.75
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	96.73
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	96.64
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	94.92
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	94.7
1suu_A	312	DNA gyrase subunit A; topoisomerase,DNA gyrase, be	93.61
3b7f_A	394	Glycosyl hydrolase, BNR repeat; 7-bladed beta-prop	92.77
4hvt_A	711	Ritya.17583.B, post-proline cleaving enzyme; ssgci	92.4
4hvt_A	711	Ritya.17583.B, post-proline cleaving enzyme; ssgci	92.09
3b7f_A	394	Glycosyl hydrolase, BNR repeat; 7-bladed beta-prop	91.84
3qhy_B	282	Beta-lactamase inhibitory protein II; enyzme-inhib	91.52
3qhy_B	282	Beta-lactamase inhibitory protein II; enyzme-inhib	90.72
3uc1_A	327	DNA gyrase subunit A; DNA binding protein, topoiso	90.68
1zi0_A	307	DNA gyrase subunit A; beta pinwheel, topoisomerase	90.53
3zwu_A	592	Alkaline phosphatase PHOX; hydrolase, beta-propell	89.37
3uc1_A	327	DNA gyrase subunit A; DNA binding protein, topoiso	89.35
1zi0_A	307	DNA gyrase subunit A; beta pinwheel, topoisomerase	89.1
1wp5_A	323	Topoisomerase IV; broken beta-propeller, hairpin-i	86.77
3q6k_A	381	43.2 kDa salivary protein; beta propeller, binding	86.42
3kci_A	389	Probable E3 ubiquitin-protein ligase HERC2; WD40,	86.42
3l6v_A	370	GYRA, DNA gyrase subunit A; gyrase A C-terminal do	86.38
1suu_A	312	DNA gyrase subunit A; topoisomerase,DNA gyrase, be	85.97
3zwu_A	592	Alkaline phosphatase PHOX; hydrolase, beta-propell	85.19
3kci_A	389	Probable E3 ubiquitin-protein ligase HERC2; WD40,	84.88
4a9v_A	592	PHOX; hydrolase, beta-propeller; 1.10A {Pseudomona	83.54
3no0_A	276	DNA gyrase subunit A; DNA topology, topoisomerase,	81.71

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=100.00  E-value=3.2e-67  Score=517.71  Aligned_cols=483  Identities=14%  Similarity=0.222  Sum_probs=398.1

Q ss_pred             CccCCCCceEEEecCCCCeEEEEcCCCCCCcccccccceEEee----ccccccccccccccccccCcceeeeccceEEEE
Q psy17610          1 MKTTPNDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMG----CYGKLIKKKVSTKLKDVNAEDVSLYSAGVTALY   76 (515)
Q Consensus         1 ~~~~~~~~~~~~g~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (515)
                      ++|+||+++|++++ ++.|.+|++.+......+..+...+.+.    ....+...+.++.+++|+..+.    .......
T Consensus        24 ~~~spdg~~l~~~~-~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~----~~~~~~~   98 (611)
T 1nr0_A           24 LGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQT----THILKTT   98 (611)
T ss_dssp             CEECTTSSEEEEEE-TTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSST----TCCEEEE
T ss_pred             EeeCCCCCEEEeCC-CCEEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCC----cceeeEe
Confidence            57899999999986 5699999998888888887776655544    3355666778889999987432    1223445


Q ss_pred             EecCCCcEEEEEEecCCCEEEEEecC----ceEEEEECCCCceeEEeeccCccCeEEEEeCCCCc-EEEEEecCCcEEEE
Q psy17610         77 LLKDDSGISSLQYNPVNNKVFVGTVN----CEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFS-SVFATCSKNDIRIW  151 (515)
Q Consensus        77 ~~~~~~~v~~~~~s~~~~~l~~~~~d----~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~~~~~d~~i~iw  151 (515)
                      +.+|.++|.+++|+|++++||+++.+    +.|++||...  . ...+.+|...|.+++|+|+++ .|++++.|++|++|
T Consensus        99 ~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~--~-~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lw  175 (611)
T 1nr0_A           99 IPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGT--S-NGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIF  175 (611)
T ss_dssp             EECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCC--B-CBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEE
T ss_pred             ecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCC--C-cceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEE
Confidence            67899999999999999999998865    4788887432  3 345678999999999999987 58999999999999


Q ss_pred             eCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecC------CCCCCeEEEEEcCCCCEEE
Q psy17610        152 SVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPN------AHNRGVTALAITQDGTRLL  225 (515)
Q Consensus       152 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~  225 (515)
                      |..+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+.+++....+..      +|...|.+++|+|++++|+
T Consensus       176 d~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~  255 (611)
T 1nr0_A          176 EGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIA  255 (611)
T ss_dssp             ETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEE
T ss_pred             ECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEE
Confidence            9999999999999999999999999999999999999999999999998877733      7999999999999999999


Q ss_pred             EecCCCcEEEEEccCCcee-----------------------------------------eEEeeccccCceEEEEEecC
Q psy17610        226 SGGGEGQVRIWKLTRESQS-----------------------------------------LQCVLKEHTSSVSVIQIKSD  264 (515)
Q Consensus       226 ~~~~d~~i~iw~~~~~~~~-----------------------------------------~~~~~~~~~~~v~~~~~~~~  264 (515)
                      +++.|++|++||+......                                         ....+.+|...|.+++|+|+
T Consensus       256 s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spd  335 (611)
T 1nr0_A          256 SASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSAD  335 (611)
T ss_dssp             EEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTT
T ss_pred             EEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCC
Confidence            9999999999998643211                                         22345689999999999999


Q ss_pred             CCEEEEEeCCCcEEEEEcccceEEEEE--EcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCce--------------
Q psy17610        265 SKEAMSASTDGTCVLWDLIKSTRLIIM--ILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSI--------------  328 (515)
Q Consensus       265 ~~~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~--------------  328 (515)
                      +++|++++.|++|++||+.+++....+  .+...+.++++++++ .+++++.|+.+++|+...+..              
T Consensus       336 g~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~-~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~  414 (611)
T 1nr0_A          336 GKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKG-DLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQP  414 (611)
T ss_dssp             SSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTS-CEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCE
T ss_pred             CCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCC-cEEEEEcCCceEEeecCCccccccceeeeecCCCC
Confidence            999999999999999999988776553  245579999999765 677889999999999765321              


Q ss_pred             ---------------------------EEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCee--eeeccCCC
Q psy17610        329 ---------------------------IRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVP--CFVGIGHA  379 (515)
Q Consensus       329 ---------------------------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~  379 (515)
                                                 +..+.  +...+.+++|+|+|++|++|+.|+.|++||+.++..  ... .+|.
T Consensus       415 ~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~--~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~  491 (611)
T 1nr0_A          415 LGLAVSADGDIAVAACYKHIAIYSHGKLTEVP--ISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHP  491 (611)
T ss_dssp             EEEEECTTSSCEEEEESSEEEEEETTEEEEEE--CSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEE-EECS
T ss_pred             cEEEEeCCCcEEEEEeCceEEEEeCCceeeee--cCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeec-cCCC
Confidence                                       11111  225678999999999999999999999999987643  234 6899


Q ss_pred             CCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEe
Q psy17610        380 ASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITC  459 (515)
Q Consensus       380 ~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~  459 (515)
                      ..|++++|+|++++|++++.|++|++|++........                 ......|...|.+++|+|+|++||++
T Consensus       492 ~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~-----------------~~~~~~H~~~V~~v~fspdg~~lasg  554 (611)
T 1nr0_A          492 AEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAH-----------------TNSWTFHTAKVACVSWSPDNVRLATG  554 (611)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESC-----------------CCCCCCCSSCEEEEEECTTSSEEEEE
T ss_pred             CceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceee-----------------eeeeeecccceeEEEECCCCCEEEEE
Confidence            9999999999999999999999999999865211000                 00112377889999999999999999


Q ss_pred             ecCCeEEEEecCCCe-ee-eeecccccceEEEEEEcCCCcEEEEeecCCeEEEEEE
Q psy17610        460 STNKMIDYWETCDGS-II-RSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLY  513 (515)
Q Consensus       460 ~~dg~v~iwd~~~~~-~~-~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~  513 (515)
                      +.|++|++||+.+++ .. ..+.+|....|.+++|+|+++ |++++.||+|++|++
T Consensus       555 s~D~~v~lW~~~~~~~~~~~~~~~h~~~~v~~v~fs~d~~-l~s~~~D~~i~lW~~  609 (611)
T 1nr0_A          555 SLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETT-IVSAGQDSNIKFWNV  609 (611)
T ss_dssp             ETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEETTE-EEEEETTSCEEEEEC
T ss_pred             ECCCcEEEEECCCcccccchhhccCcccCeeEEEEcCCCE-EEEecCCCCEEEEec
Confidence            999999999998865 33 566777348999999999998 999999999999985

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=100.00  E-value=4.8e-65  Score=501.96  Aligned_cols=476  Identities=21%  Similarity=0.336  Sum_probs=400.7

Q ss_pred             CccCCCCceEEEecCCCCeEEEEcCCCCCCcccccccceEEeec----cccccccccccccccccCcce-----------
Q psy17610          1 MKTTPNDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMGC----YGKLIKKKVSTKLKDVNAEDV-----------   65 (515)
Q Consensus         1 ~~~~~~~~~~~~g~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-----------   65 (515)
                      |+|+||+++|++|+.+|.|.+||.+. +.+..+..+...+...+    ...+........+..|+....           
T Consensus        63 l~fspdg~~las~~~d~~i~vWd~~~-~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~  141 (577)
T 2ymu_A           63 VAFSPDGQTIASASDDKTVKLWNRNG-QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSS  141 (577)
T ss_dssp             EEECTTSSEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCCEEEEECCCSSC
T ss_pred             EEECCCCCEEEEEeCCCEEEEEECCC-CEEEEEECCCCCEEEEEECCCCCEEEEEcCCCceeecccccceeeeccCCCCc
Confidence            57999999999999999999999754 55666665544433322    233333444444444432211           


Q ss_pred             ----------------------eeec-cceEEEEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeecc
Q psy17610         66 ----------------------SLYS-AGVTALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTC  122 (515)
Q Consensus        66 ----------------------~~~~-~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~  122 (515)
                                            .++. ..........|...|.+++|+|++++|++++.|+.|++||...  .....+.+
T Consensus       142 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~~~--~~~~~~~~  219 (577)
T 2ymu_A          142 VWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG--QLLQTLTG  219 (577)
T ss_dssp             EEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTS--CEEEEEEC
T ss_pred             eeeeeeecCCccceecccccceeccccceeeeeeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeCCC--cEEEEEec
Confidence                                  1111 1123345567889999999999999999999999999999754  44455677


Q ss_pred             CccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEE
Q psy17610        123 HTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKF  202 (515)
Q Consensus       123 h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~  202 (515)
                      |...|.+++|+|++++|++++.|+.|++||. +++.+..+.+|...|.+++|+|+++.+++++.|+.|++|+.. ++...
T Consensus       220 ~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~-~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~-~~~~~  297 (577)
T 2ymu_A          220 HSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRN-GQLLQ  297 (577)
T ss_dssp             CSSCEEEEEECTTSSCEEEEETTSCEEEECT-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEE
T ss_pred             CCCCEEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCC-CcEEE
Confidence            9999999999999999999999999999996 467888899999999999999999999999999999999964 55666


Q ss_pred             EecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEc
Q psy17610        203 IIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDL  282 (515)
Q Consensus       203 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~  282 (515)
                      .+ .+|...|.+++|+|+++.+++++.|+.|++||...   .....+.+|...+.+++|+|+++++++++.|+.+++||.
T Consensus       298 ~~-~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~---~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~  373 (577)
T 2ymu_A          298 TL-TGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG---QHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR  373 (577)
T ss_dssp             EE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS---CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred             EE-ecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC---CeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC
Confidence            66 68999999999999999999999999999999743   334567889999999999999999999999999999996


Q ss_pred             ccceEEEEEE-cCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeE
Q psy17610        283 IKSTRLIIMI-LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIV  361 (515)
Q Consensus       283 ~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i  361 (515)
                      . ++.+..+. +...+.+++|+|+++++++++.|+.|++||. +++.+..+..+. ..+.+++|+|++++|++++.|+.|
T Consensus       374 ~-~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~-~~v~~~~~s~d~~~l~~~~~d~~v  450 (577)
T 2ymu_A          374 N-GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHS-SSVWGVAFSPDDQTIASASDDKTV  450 (577)
T ss_dssp             T-CCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCS-SCEEEEEECTTSSEEEEEETTSEE
T ss_pred             C-CCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCC-CCeEEEEECCCCCEEEEEcCCCEE
Confidence            4 45555544 5568999999999999999999999999995 677788888776 899999999999999999999999


Q ss_pred             EEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCc
Q psy17610        362 KMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILP  441 (515)
Q Consensus       362 ~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  441 (515)
                      ++||. +++.+..+.+|...|++++|+|++++|++++.|+.|++|+....                     ....+..|.
T Consensus       451 ~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~---------------------~~~~~~~h~  508 (577)
T 2ymu_A          451 KLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQ---------------------LLQTLTGHS  508 (577)
T ss_dssp             EEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTSC---------------------EEEEEECCS
T ss_pred             EEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCC---------------------EEEEEeCCC
Confidence            99997 56778888999999999999999999999999999999995321                     112344577


Q ss_pred             ccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEEEEE
Q psy17610        442 SMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICL  512 (515)
Q Consensus       442 ~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~  512 (515)
                      ..|++++|+|++++||+++.||.|++||. +++++..+.+|. ..|++++|+|||++|+|++.||+|++||
T Consensus       509 ~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~-~~v~~~~fs~dg~~l~s~~~D~~i~~Wd  577 (577)
T 2ymu_A          509 SSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHS-SSVWGVAFSPDGQTIASASSDKTVKLWN  577 (577)
T ss_dssp             SCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCS-SCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             CCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCC-CCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence            88999999999999999999999999995 788999999987 9999999999999999999999999997

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=100.00  E-value=1.2e-64  Score=499.14  Aligned_cols=473  Identities=21%  Similarity=0.342  Sum_probs=408.9

Q ss_pred             CccCCCCceEEEecCCCCeEEEEcCCCCCCcccccccceEEee----ccccccccccccccccccCcceeeeccceEEEE
Q psy17610          1 MKTTPNDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMG----CYGKLIKKKVSTKLKDVNAEDVSLYSAGVTALY   76 (515)
Q Consensus         1 ~~~~~~~~~~~~g~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (515)
                      |+|+||+++|++|+.+|.|.+||. +.+.+..+..+...+...    ....+.....++.+++|+..       +.....
T Consensus        22 ~a~spdg~~las~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~~-------~~~~~~   93 (577)
T 2ymu_A           22 VAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-------GQLLQT   93 (577)
T ss_dssp             EEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-------SCEEEE
T ss_pred             EEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECC-------CCEEEE
Confidence            579999999999999999999996 456777788776655443    33456667777888899853       234456


Q ss_pred             EecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCce---------------------------------------eE
Q psy17610         77 LLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFT---------------------------------------LT  117 (515)
Q Consensus        77 ~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~---------------------------------------~~  117 (515)
                      +.+|.+.|.+++|+|++++|++++.|+.+++|+......                                       ..
T Consensus        94 ~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (577)
T 2ymu_A           94 LTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLL  173 (577)
T ss_dssp             ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEE
T ss_pred             EECCCCCEEEEEECCCCCEEEEEcCCCceeecccccceeeeccCCCCceeeeeeecCCccceecccccceeccccceeee
Confidence            778999999999999999999999999999999754211                                       11


Q ss_pred             EeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCC
Q psy17610        118 LVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQS  197 (515)
Q Consensus       118 ~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~  197 (515)
                      .....|...|.++.|+|+++++++++.|+.|++||. +++.+..+..|...|.+++|+|++++|++++.|+.|++||.. 
T Consensus       174 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~~-  251 (577)
T 2ymu_A          174 QTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-  251 (577)
T ss_dssp             EEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTT-
T ss_pred             eeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeC-CCcEEEEEecCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCC-
Confidence            123356778999999999999999999999999996 578888999999999999999999999999999999999964 


Q ss_pred             CceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcE
Q psy17610        198 GKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTC  277 (515)
Q Consensus       198 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i  277 (515)
                      ++.+..+ .+|...|.+++|+|+++.+++++.|+.|++|+..   ......+.+|...|.+++|+|+++.+++++.|+.|
T Consensus       252 ~~~~~~~-~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~---~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i  327 (577)
T 2ymu_A          252 GQLLQTL-TGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRN---GQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTV  327 (577)
T ss_dssp             SCEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT---SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred             CCEEEEE-ecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCC---CcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeE
Confidence            5666666 6899999999999999999999999999999964   34566788999999999999999999999999999


Q ss_pred             EEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcC
Q psy17610        278 VLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA  357 (515)
Q Consensus       278 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~  357 (515)
                      ++||...........+...+.+++++|+++++++++.++.+++||. +++.+..+..+. ..+.+++|+|++++|++++.
T Consensus       328 ~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~-~~v~~~~~s~dg~~l~~~~~  405 (577)
T 2ymu_A          328 KLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHS-SSVRGVAFSPDGQTIASASD  405 (577)
T ss_dssp             EEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCS-SCEEEEEECTTSSCEEEEET
T ss_pred             EEEeCCCCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCC-CCeEEEEECCCCCEEEEEeC
Confidence            9999876665554455678999999999999999999999999995 677788888766 89999999999999999999


Q ss_pred             CCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceee
Q psy17610        358 DQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLII  437 (515)
Q Consensus       358 dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  437 (515)
                      |+.|++||. +++.+..+.+|...|++++|+|++++|++++.|+.|++|+....                     .....
T Consensus       406 d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~---------------------~~~~~  463 (577)
T 2ymu_A          406 DKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQ---------------------LLQTL  463 (577)
T ss_dssp             TSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTSC---------------------EEEEE
T ss_pred             CCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCCC---------------------EEEEE
Confidence            999999996 56788888999999999999999999999999999999996421                     11223


Q ss_pred             ecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEEEEEE
Q psy17610        438 MILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLY  513 (515)
Q Consensus       438 ~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~  513 (515)
                      ..|...|.+++|+|++++|++++.|+.|++||. +++++..+.+|. ..|++++|+|||++|++++.||.|++||+
T Consensus       464 ~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~-~~v~~l~~s~dg~~l~s~~~dg~v~lwd~  537 (577)
T 2ymu_A          464 TGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHS-SSVRGVAFSPDGQTIASASDDKTVKLWNR  537 (577)
T ss_dssp             ECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCS-SCEEEEEECTTSSCEEEEETTSEEEEECT
T ss_pred             cCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCC-CCEEEEEEcCCCCEEEEEECcCEEEEEeC
Confidence            456778999999999999999999999999995 788999999987 89999999999999999999999999983

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=100.00  E-value=2.4e-63  Score=490.04  Aligned_cols=427  Identities=15%  Similarity=0.192  Sum_probs=356.4

Q ss_pred             ccccccccCcceeeeccceEEEEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCce-eEEeeccCccCeEEEEe
Q psy17610         54 STKLKDVNAEDVSLYSAGVTALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFT-LTLVNTCHTSAIYDLQF  132 (515)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~-~~~~~~~h~~~v~~~~~  132 (515)
                      .+.+.+|+..+.+      ....+.+|...|++++|+|+|++||+|+.|++|+|||+.++.. ....+.+|.++|.+++|
T Consensus        38 ~~~v~l~~~~~~~------~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~f  111 (611)
T 1nr0_A           38 GTSVYTVPVGSLT------DTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISW  111 (611)
T ss_dssp             TTEEEEEETTCSS------CCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEE
T ss_pred             CCEEEEecCCCcc------cCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEE
Confidence            3466777764322      3345678999999999999999999999999999999975433 34567789999999999


Q ss_pred             CCCCcEEEEEecC----CcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCC-EEEEEeCCCeEEEEecCCCceEEEecCC
Q psy17610        133 PVNFSSVFATCSK----NDIRIWSVRTLNELLRISVMNMICACIVFTYDGK-AILSGWNDGFIRCFTPQSGKLKFIIPNA  207 (515)
Q Consensus       133 ~~~~~~l~~~~~d----~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~~~~~~~~~~~~~~~  207 (515)
                      +|+++.|++++.+    +.|++||  .++....+.+|...|.+++|+|++. .|++++.|+.|++||..+++....+ .+
T Consensus       112 s~dg~~l~~~~~~~~~~~~v~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l-~~  188 (611)
T 1nr0_A          112 DSESKRIAAVGEGRERFGHVFLFD--TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTF-GE  188 (611)
T ss_dssp             CTTSCEEEEEECCSSCSEEEEETT--TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEE-CC
T ss_pred             CCCCCEEEEEECCCCceeEEEEee--CCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeee-cc
Confidence            9999999998875    3677777  5667777889999999999999987 6999999999999999998888877 78


Q ss_pred             CCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeec-------cccCceEEEEEecCCCEEEEEeCCCcEEEE
Q psy17610        208 HNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLK-------EHTSSVSVIQIKSDSKEAMSASTDGTCVLW  280 (515)
Q Consensus       208 ~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw  280 (515)
                      |...|.+++|+|++++|++++.|+.|++||+...  .....+.       +|...|.+++|+|++++|++++.|++|++|
T Consensus       189 H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g--~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lW  266 (611)
T 1nr0_A          189 HTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDG--TKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIW  266 (611)
T ss_dssp             CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC--CEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred             ccCceEEEEECCCCCEEEEEECCCcEEEEECCCC--cEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEE
Confidence            9999999999999999999999999999998543  3444442       799999999999999999999999999999


Q ss_pred             EcccceEEEEEE--------------------------------------------cCccEEEEEEcCCCcEEEEEECCC
Q psy17610        281 DLIKSTRLIIMI--------------------------------------------LPSMIMSAAYHPSEVQLITCSTNK  316 (515)
Q Consensus       281 d~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~~~~~~l~~~~~~~  316 (515)
                      |+++++....+.                                            +...+.+++|+|++++|++++.|+
T Consensus       267 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~  346 (611)
T 1nr0_A          267 NVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEG  346 (611)
T ss_dssp             ETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred             eCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCC
Confidence            998877654432                                            334689999999999999999999


Q ss_pred             eEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCee-------------------------
Q psy17610        317 MIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVP-------------------------  371 (515)
Q Consensus       317 ~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-------------------------  371 (515)
                      .|++||+.+++....+...+...+.+++|++++ .+++++.|+.+++|+...+..                         
T Consensus       347 ~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~-~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~  425 (611)
T 1nr0_A          347 HINSWDISTGISNRVFPDVHATMITGIKTTSKG-DLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDI  425 (611)
T ss_dssp             CEEEEETTTCCEEECSSCSCSSCEEEEEECTTS-CEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSC
T ss_pred             cEEEEECCCCceeeecccCCcceEEEEEECCCC-cEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcE
Confidence            999999999988776644455889999999876 577888999999999764321                         


Q ss_pred             ----------------eeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccce
Q psy17610        372 ----------------CFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRL  435 (515)
Q Consensus       372 ----------------~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  435 (515)
                                      +..+ .|...+.+++|+||+++|++++.|+.|++||+.....                   ...
T Consensus       426 ~~~~~~~~v~~~~~~~~~~~-~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~-------------------~~~  485 (611)
T 1nr0_A          426 AVAACYKHIAIYSHGKLTEV-PISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASV-------------------SEV  485 (611)
T ss_dssp             EEEEESSEEEEEETTEEEEE-ECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEE-------------------EEE
T ss_pred             EEEEeCceEEEEeCCceeee-ecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCce-------------------eee
Confidence                            0111 2456789999999999999999999999999864320                   000


Q ss_pred             eeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCC-Ceeeee-ecc-cccceEEEEEEcCCCcEEEEeecCCeEEEEE
Q psy17610        436 IIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCD-GSIIRS-LEG-SDVAAVNCVDFVDDGKYFLTGGADQIVKICL  512 (515)
Q Consensus       436 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~-~~~~~~-~~~-~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~  512 (515)
                      ....|...|++++|+|+|++|++++.|+.|++|++.+ +++... ... |. ..|.+++|+|||++|++++.|++|++|+
T Consensus       486 ~~~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~-~~V~~v~fspdg~~lasgs~D~~v~lW~  564 (611)
T 1nr0_A          486 KTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHT-AKVACVSWSPDNVRLATGSLDNSVIVWN  564 (611)
T ss_dssp             EEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCS-SCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             eccCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecc-cceeEEEECCCCCEEEEEECCCcEEEEE
Confidence            1135778899999999999999999999999999988 666554 333 65 8999999999999999999999999998


Q ss_pred             E
Q psy17610        513 Y  513 (515)
Q Consensus       513 ~  513 (515)
                      +
T Consensus       565 ~  565 (611)
T 1nr0_A          565 M  565 (611)
T ss_dssp             T
T ss_pred             C
Confidence            5

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=100.00  E-value=4.8e-61  Score=513.85  Aligned_cols=490  Identities=14%  Similarity=0.192  Sum_probs=420.2

Q ss_pred             CccCCCCceEEEecCCCCeEEEEcCCCCCCcccccccceEEeec----cccccccccccccccccCcceeeeccceEEEE
Q psy17610          1 MKTTPNDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMGC----YGKLIKKKVSTKLKDVNAEDVSLYSAGVTALY   76 (515)
Q Consensus         1 ~~~~~~~~~~~~g~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (515)
                      ++|+|+++++++|+.+|.|.+||+.+...+..+..+...+....    ...+.....++.+.+|+..+.+      ....
T Consensus       621 ~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~------~~~~  694 (1249)
T 3sfz_A          621 ACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGK------LVHT  694 (1249)
T ss_dssp             EEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC------EEEE
T ss_pred             EEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCc------eEEE
Confidence            47899999999999999999999999988888887766655543    3456667778889999886543      3455


Q ss_pred             EecCCCcEEEEEEec--CCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCC
Q psy17610         77 LLKDDSGISSLQYNP--VNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVR  154 (515)
Q Consensus        77 ~~~~~~~v~~~~~s~--~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~  154 (515)
                      +.+|...|.+++|+|  ++.++++|+.|+.|++||+.++.. ...+.+|.+.|.+++|+|+++.+++++.|+.|++||+.
T Consensus       695 ~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~-~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~  773 (1249)
T 3sfz_A          695 YDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKEC-RNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVR  773 (1249)
T ss_dssp             EECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSE-EEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGG
T ss_pred             EcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcch-hheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCC
Confidence            678999999999999  566899999999999999999654 44566799999999999999999999999999999998


Q ss_pred             CCceeEEEE-------------------------------------------------------ecCeEEEEEEEeeCCC
Q psy17610        155 TLNELLRIS-------------------------------------------------------VMNMICACIVFTYDGK  179 (515)
Q Consensus       155 ~~~~~~~~~-------------------------------------------------------~~~~~v~~~~~~~~~~  179 (515)
                      +++....+.                                                       +|...+.+++|+|+++
T Consensus       774 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~  853 (1249)
T 3sfz_A          774 SANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDH  853 (1249)
T ss_dssp             GTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTT
T ss_pred             CCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCC
Confidence            765544332                                                       4566788999999999


Q ss_pred             EEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCC------------------
Q psy17610        180 AILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRE------------------  241 (515)
Q Consensus       180 ~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~------------------  241 (515)
                      ++++++.+|.|++||+.++.....+ .+|...|.+++|+|+++++++++.|+.|++|++...                  
T Consensus       854 ~l~~~~~dg~v~vwd~~~~~~~~~~-~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~  932 (1249)
T 3sfz_A          854 LAVIALSQYCVELWNIDSRLKVADC-RGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQE  932 (1249)
T ss_dssp             EEEEECSSSCEEEEETTTTEEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEET
T ss_pred             EEEEEeCCCeEEEEEcCCCceeeec-CCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcC
Confidence            9999999999999999999988888 699999999999999999999999999999996320                  


Q ss_pred             -----------------------------------------------------------ceeeEEeeccccCceEEEEEe
Q psy17610        242 -----------------------------------------------------------SQSLQCVLKEHTSSVSVIQIK  262 (515)
Q Consensus       242 -----------------------------------------------------------~~~~~~~~~~~~~~v~~~~~~  262 (515)
                                                                                 .......+.+|...|.+++|+
T Consensus       933 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s 1012 (1249)
T 3sfz_A          933 NETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFT 1012 (1249)
T ss_dssp             TEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEEC
T ss_pred             CCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEEC
Confidence                                                                       011223455788999999999


Q ss_pred             cCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEE
Q psy17610        263 SDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNC  342 (515)
Q Consensus       263 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~  342 (515)
                      |+++++++++.||.|++||+.+++......+...+.+++++|++ .+++++.++.+++||+.+++....+..+. ..+.+
T Consensus      1013 ~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~dg~v~vwd~~~~~~~~~~~~~~-~~v~~ 1090 (1249)
T 3sfz_A         1013 ADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQDS-RLLSWSFDGTVKVWNVITGRIERDFTCHQ-GTVLS 1090 (1249)
T ss_dssp             SSSSCEEEECSSSBEEEEETTTTEEECCBCCSSCEEEEEECSSS-EEEEEESSSEEEEEETTTTCCCEEEECCS-SCCCC
T ss_pred             CCCCEEEEEcCCCEEEEEECCCCceEEEecCCCcEEEEEEcCCC-cEEEEECCCcEEEEECCCCceeEEEcccC-CcEEE
Confidence            99999999999999999999999888777777899999999965 57788999999999999999999998876 88999


Q ss_pred             EEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccc
Q psy17610        343 VDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLS  422 (515)
Q Consensus       343 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~  422 (515)
                      ++|+|+++++++++.||.|++||+.+++++..+.+|...|++++|+|++++|++++.||.|++||+.+.+........  
T Consensus      1091 ~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~~~~~~~~-- 1168 (1249)
T 3sfz_A         1091 CAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHSCAPI-- 1168 (1249)
T ss_dssp             EEECSSSSSCEEECCSSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSCCCCCCCCC--
T ss_pred             EEECCCCCEEEEEcCCCcEEEEECCCcceeeeeccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEeccc--
Confidence            999999999999999999999999999999999999999999999999999999999999999999876532211000  


Q ss_pred             eeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEe
Q psy17610        423 SKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTG  502 (515)
Q Consensus       423 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~  502 (515)
                               ........|...|++++|+|++++|++++  |.|++||+.+++.+..+..|. ..|.+++|+|||++|+++
T Consensus      1169 ---------~~~~~~~~~~~~v~~l~fs~dg~~l~s~~--g~v~vwd~~~g~~~~~~~~~~-~~i~~~~~s~dg~~l~~~ 1236 (1249)
T 3sfz_A         1169 ---------SVEEGTATHGGWVTDVCFSPDSKTLVSAG--GYLKWWNVATGDSSQTFYTNG-TNLKKIHVSPDFRTYVTV 1236 (1249)
T ss_dssp             ---------C-------CCSCCCEEEECTTSSCEEEES--SSEEEBCSSSCBCCCCCCCSS-CCCCCCEECSSSCCEEEE
T ss_pred             ---------cccccccccCceEEEEEECCCCCEEEECC--CeEEEEECCCCceeeeeeccC-CcccEEEECCCCCEEEEe
Confidence                     00111234667899999999999999885  899999999999999998886 899999999999999999


Q ss_pred             ecCCeEEEEEEe
Q psy17610        503 GADQIVKICLYI  514 (515)
Q Consensus       503 ~~dg~v~iw~~~  514 (515)
                      +.||.|++|+++
T Consensus      1237 ~~dg~v~vw~l~ 1248 (1249)
T 3sfz_A         1237 DNLGILYILQVL 1248 (1249)
T ss_dssp             CTTCCEEEECCC
T ss_pred             cCCcEEEEEeec
Confidence            999999999975

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=100.00  E-value=4.3e-59  Score=463.50  Aligned_cols=441  Identities=14%  Similarity=0.182  Sum_probs=371.5

Q ss_pred             CccCCCCceEEEecCCCCeEEEEcCCCCCCcccccccceEEeeccccccccccccccccccCcceeeeccceEEEEEecC
Q psy17610          1 MKTTPNDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMGCYGKLIKKKVSTKLKDVNAEDVSLYSAGVTALYLLKD   80 (515)
Q Consensus         1 ~~~~~~~~~~~~g~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (515)
                      |+|+|++++|++|+ +|.|.+||+.+....                               .         .....+.+|
T Consensus        24 ~~~spdg~~l~~~~-~~~v~v~~~~~~~~~-------------------------------~---------~~~~~~~~h   62 (615)
T 1pgu_A           24 LSYDPTTNAIAYPC-GKSAFVRCLDDGDSK-------------------------------V---------PPVVQFTGH   62 (615)
T ss_dssp             CEEETTTTEEEEEE-TTEEEEEECCSSCCS-------------------------------S---------CSEEEECTT
T ss_pred             EEECCCCCEEEEec-CCeEEEEECCCCCCc-------------------------------c---------ccceEEecC
Confidence            57899999999987 789999997753000                               0         023345679


Q ss_pred             CCc-EEEEEEec--CCCEEEEEecCceEEEEECCCC-------ceeEEeeccCccCeEEEEeCCCCcEEEEEecC----C
Q psy17610         81 DSG-ISSLQYNP--VNNKVFVGTVNCEIFLIDMNSG-------FTLTLVNTCHTSAIYDLQFPVNFSSVFATCSK----N  146 (515)
Q Consensus        81 ~~~-v~~~~~s~--~~~~l~~~~~d~~i~iw~~~~~-------~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d----~  146 (515)
                      .+. |++++|+|  ++++||+|+.||.|++||+.++       ......+.+|..+|.+++|+|+++++++++.+    +
T Consensus        63 ~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~  142 (615)
T 1pgu_A           63 GSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFG  142 (615)
T ss_dssp             TTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSE
T ss_pred             CCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCcc
Confidence            999 99999999  9999999999999999999754       24555667799999999999999999999987    6


Q ss_pred             cEEEEeCCCCceeEEEEecCeEEEEEEEeeCCC-EEEEEeCCCeEEEEecCCCceEEEecCCCCC---CeEEEEEcCC-C
Q psy17610        147 DIRIWSVRTLNELLRISVMNMICACIVFTYDGK-AILSGWNDGFIRCFTPQSGKLKFIIPNAHNR---GVTALAITQD-G  221 (515)
Q Consensus       147 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~-~  221 (515)
                      .|.+||  .++.+..+..|...|.+++|+|+++ .+++++.|+.|++||+.+++....+ ..|..   .|.+++|+|+ +
T Consensus       143 ~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~  219 (615)
T 1pgu_A          143 VFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASD-RTHHKQGSFVRDVEFSPDSG  219 (615)
T ss_dssp             EEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEE-CSSSCTTCCEEEEEECSTTC
T ss_pred             EEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeee-cccCCCCceEEEEEECCCCC
Confidence            788887  6778888899999999999999998 8999999999999999999998888 68888   9999999999 9


Q ss_pred             CEEEEecCCCcEEEEEccCCceeeEEee-c---cccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC---
Q psy17610        222 TRLLSGGGEGQVRIWKLTRESQSLQCVL-K---EHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP---  294 (515)
Q Consensus       222 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~-~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~---  294 (515)
                      ++|++++.|+.|++||+.  .......+ .   .|...|.+++|+ +++++++++.|+.|++||+++++....+..+   
T Consensus       220 ~~l~~~~~dg~i~vwd~~--~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~  296 (615)
T 1pgu_A          220 EFVITVGSDRKISCFDGK--SGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQ  296 (615)
T ss_dssp             CEEEEEETTCCEEEEETT--TCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTC
T ss_pred             CEEEEEeCCCeEEEEECC--CCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCc
Confidence            999999999999999995  34455566 5   899999999999 9999999999999999999999998888776   


Q ss_pred             --ccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCC------------------------
Q psy17610        295 --SMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDD------------------------  348 (515)
Q Consensus       295 --~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~------------------------  348 (515)
                        ..+.++.+. ++.++++++.++.|++||+.+++.+..+..+. ..+.+++| |+                        
T Consensus       297 ~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~-~~v~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~  373 (615)
T 1pgu_A          297 LGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDEVLKTISGHN-KGITALTV-NPLISGSYDGRIMEWSSSSMHQDHSN  373 (615)
T ss_dssp             GGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEEEEEEECCCS-SCEEEEET-TTTEEEETTSCEEETTTTEEECCCCS
T ss_pred             ccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCcEEEEEeCCC-CCEEEEEe-cCcEEECCCCeEEEEEchhhcCcccC
Confidence              467778875 89999999999999999998877776665433 33333333 21                        


Q ss_pred             --------------------------------------------------------------------------------
Q psy17610        349 --------------------------------------------------------------------------------  348 (515)
Q Consensus       349 --------------------------------------------------------------------------------  348 (515)
                                                                                                      
T Consensus       374 ~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  453 (615)
T 1pgu_A          374 LIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVS  453 (615)
T ss_dssp             CEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEE
T ss_pred             ceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEE
Confidence                                                                                            


Q ss_pred             --CCEEEEEcC-CCeEEEEEccCCeee-eeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCccccee
Q psy17610        349 --GKYFLTGGA-DQIVKMWMYREGVPC-FVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSK  424 (515)
Q Consensus       349 --~~~l~~~~~-dg~i~i~d~~~~~~~-~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~  424 (515)
                        ++++++++. |+.|++||+.+++.. ..+.+|...|++++|+|++++|++++.||.|++||+...+..          
T Consensus       454 ~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~----------  523 (615)
T 1pgu_A          454 LSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVK----------  523 (615)
T ss_dssp             ECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE----------
T ss_pred             EcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcce----------
Confidence              445555565 667777777665544 667789999999999999999999999999999999765421          


Q ss_pred             eecccccccceeeec-CcccEEEeeecc----------CCcEEEEeecCCeEEEEecCCC-eeeeeecccccceEEEEEE
Q psy17610        425 ISRSTARSTRLIIMI-LPSMIMSAAYHP----------SEVQLITCSTNKMIDYWETCDG-SIIRSLEGSDVAAVNCVDF  492 (515)
Q Consensus       425 ~~~~~~~~~~~~~~~-~~~~i~~~~~s~----------~~~~l~~~~~dg~v~iwd~~~~-~~~~~~~~~~~~~v~~~~~  492 (515)
                                ..... |...|++++|+|          ++++|++++.||.|++||+.++ +++..+.+|. ..|.+++|
T Consensus       524 ----------~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~-~~v~~l~~  592 (615)
T 1pgu_A          524 ----------TSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHK-DGVNNLLW  592 (615)
T ss_dssp             ----------ECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSST-TCEEEEEE
T ss_pred             ----------eEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCc-cceEEEEE
Confidence                      11222 667899999999          9999999999999999999998 7888899887 99999999


Q ss_pred             cCCCcEEEEeecCCeEEEEEE
Q psy17610        493 VDDGKYFLTGGADQIVKICLY  513 (515)
Q Consensus       493 s~~~~~l~s~~~dg~v~iw~~  513 (515)
                      +|+++ |++++.||.|++|++
T Consensus       593 s~~~~-l~s~~~d~~v~iw~~  612 (615)
T 1pgu_A          593 ETPST-LVSSGADACIKRWNV  612 (615)
T ss_dssp             EETTE-EEEEETTSCEEEEEE
T ss_pred             cCCCC-eEEecCCceEEEEee
Confidence            99999 999999999999997

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.7e-58  Score=466.45  Aligned_cols=461  Identities=11%  Similarity=0.098  Sum_probs=349.0

Q ss_pred             CccCCCCceEEEecCCCCeEEEEcCCCCCCcccccccceEEeeccccccccccccccccccCcceeeeccceEEEEEecC
Q psy17610          1 MKTTPNDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMGCYGKLIKKKVSTKLKDVNAEDVSLYSAGVTALYLLKD   80 (515)
Q Consensus         1 ~~~~~~~~~~~~g~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (515)
                      |+|+|++++|++|+.+|.|.+|+..+.                                             .......|
T Consensus        23 lafspdg~~lAsgs~Dg~I~lw~~~~~---------------------------------------------~~~~~~~~   57 (902)
T 2oaj_A           23 AAFDFTQNLLAIATVTGEVHIYGQQQV---------------------------------------------EVVIKLED   57 (902)
T ss_dssp             EEEETTTTEEEEEETTSEEEEECSTTC---------------------------------------------EEEEECSS
T ss_pred             EEECCCCCEEEEEeCCCEEEEEeCCCc---------------------------------------------EEEEEcCC
Confidence            579999999999999999999996542                                             11223457


Q ss_pred             CCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCcee-
Q psy17610         81 DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNEL-  159 (515)
Q Consensus        81 ~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~-  159 (515)
                      ..+|.+++|+| +++|++++.|+.|++||+.+++.+... . |.+.|++++|+|+++++++++.||.|++||+++++.. 
T Consensus        58 ~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~-~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~  134 (902)
T 2oaj_A           58 RSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTV-F-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSS  134 (902)
T ss_dssp             CCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEE-E-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEE
T ss_pred             CCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEE-c-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCcccc
Confidence            88999999999 889999999999999999987655444 3 7789999999999999999999999999999987653 


Q ss_pred             ----------EEEEecCeEEEEEEEeeC-CCEEEEEeCCCeEEEEecCCCceEEEecCCC------------------CC
Q psy17610        160 ----------LRISVMNMICACIVFTYD-GKAILSGWNDGFIRCFTPQSGKLKFIIPNAH------------------NR  210 (515)
Q Consensus       160 ----------~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~------------------~~  210 (515)
                                ..+.+|..+|.+++|+|+ +..+++++.||.| +||+++++....+. .|                  ..
T Consensus       135 ~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~h~~  212 (902)
T 2oaj_A          135 FKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFI-YELPPFAPGGDFSEKTNEKRTP  212 (902)
T ss_dssp             EEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEEC-CCBCTTCCCSTTCCCTTSCBCC
T ss_pred             ceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEe-cccCCcCCCcccccccccccCC
Confidence                      112357789999999996 5789999999999 99999998887763 33                  57


Q ss_pred             CeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEee---c-------------cccCceEEEEEec----CC-CEEE
Q psy17610        211 GVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVL---K-------------EHTSSVSVIQIKS----DS-KEAM  269 (515)
Q Consensus       211 ~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~---~-------------~~~~~v~~~~~~~----~~-~~l~  269 (515)
                      .|.+++|+|+|++|++++.||.|++||+++........+   .             .|...|.+++|++    ++ ..++
T Consensus       213 ~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~  292 (902)
T 2oaj_A          213 KVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLI  292 (902)
T ss_dssp             CEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEE
T ss_pred             CeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEE
Confidence            799999999999999999999999999965432221122   1             1355799999965    33 4566


Q ss_pred             EEeCC-----CcEEEEEcc------------------cceEEEEEE--cCccEEEEEEcC----------CCcEEEEEEC
Q psy17610        270 SASTD-----GTCVLWDLI------------------KSTRLIIMI--LPSMIMSAAYHP----------SEVQLITCST  314 (515)
Q Consensus       270 ~~~~d-----~~i~iwd~~------------------~~~~~~~~~--~~~~~~~~~~~~----------~~~~l~~~~~  314 (515)
                      +++.+     ..+.+|++.                  +.+....+.  ....+..+.+.+          +...+++++.
T Consensus       293 sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~  372 (902)
T 2oaj_A          293 SHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILG  372 (902)
T ss_dssp             EEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEET
T ss_pred             eCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcC
Confidence            77665     378899853                  223333333  356788888765          3447888999


Q ss_pred             CCeEEEEeCCCCceEEE-------EecCC---------------------------------CccEEEEEEcCCCCEEEE
Q psy17610        315 NKMIDYWETCDGSIIRS-------LEGSD---------------------------------VAAVNCVDFVDDGKYFLT  354 (515)
Q Consensus       315 ~~~i~~~d~~~~~~~~~-------~~~~~---------------------------------~~~i~~~~~~~~~~~l~~  354 (515)
                      ++.|++||+.++.....       +..++                                 ...+..++|+|++++|++
T Consensus       373 dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laS  452 (902)
T 2oaj_A          373 NGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFIT  452 (902)
T ss_dssp             TSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEE
T ss_pred             CCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEE
Confidence            99999999977754322       11111                                 123344566899999999


Q ss_pred             EcCCCeEEEEEccCCeee----ee--c-----cCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccC------C
Q psy17610        355 GGADQIVKMWMYREGVPC----FV--G-----IGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVG------D  417 (515)
Q Consensus       355 ~~~dg~i~i~d~~~~~~~----~~--~-----~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~------~  417 (515)
                      |+.|++|++||+.++...    ..  +     .+|...|++++|+||+++||+++.||+|++|++...+....      .
T Consensus       453 gs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~  532 (902)
T 2oaj_A          453 GHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESG  532 (902)
T ss_dssp             EETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC----------
T ss_pred             ecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCc
Confidence            999999999999877421    11  1     17899999999999999999999999999999976531000      0


Q ss_pred             C-------------cccceeeec------ccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeee-
Q psy17610        418 S-------------RSLSSKISR------STARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIR-  477 (515)
Q Consensus       418 ~-------------~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~-  477 (515)
                      .             .........      .........+..|...|++++||||| +||+|+.|++|++||+.++..+. 
T Consensus       533 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~  611 (902)
T 2oaj_A          533 DLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYM  611 (902)
T ss_dssp             -----CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEE
T ss_pred             ccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEE
Confidence            0             000000000      00001123455689999999999999 99999999999999998887654 


Q ss_pred             ----eec-ccccceEEEEEEc-----CCC---cEEEEeecCCeEEEEEE
Q psy17610        478 ----SLE-GSDVAAVNCVDFV-----DDG---KYFLTGGADQIVKICLY  513 (515)
Q Consensus       478 ----~~~-~~~~~~v~~~~~s-----~~~---~~l~s~~~dg~v~iw~~  513 (515)
                          .+. +|. ..|++++|+     |||   ++|++|+.||+|++||+
T Consensus       612 ~~~~~~~~gh~-~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~  659 (902)
T 2oaj_A          612 ENIREISGAQS-ACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKI  659 (902)
T ss_dssp             EEGGGTCSSCC-CCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEE
T ss_pred             eehhHhccccc-cceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEE
Confidence                232 665 889999999     885   89999999999999997

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=100.00  E-value=3.2e-56  Score=476.67  Aligned_cols=439  Identities=17%  Similarity=0.256  Sum_probs=373.1

Q ss_pred             eEEEEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEE
Q psy17610         72 VTALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIW  151 (515)
Q Consensus        72 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw  151 (515)
                      .....+.+|.+.|++++|+|++++||+|+.||.|++||..++..+ ..+.+|.+.|.+++|+|+++++++++.|+.|++|
T Consensus       606 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~-~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vw  684 (1249)
T 3sfz_A          606 LSRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKL-LDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIW  684 (1249)
T ss_dssp             CCSEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE-EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred             cceEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEE-EEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEE
Confidence            344567799999999999999999999999999999999996544 4566899999999999999999999999999999


Q ss_pred             eCCCCceeEEEEecCeEEEEEEEee--CCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecC
Q psy17610        152 SVRTLNELLRISVMNMICACIVFTY--DGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGG  229 (515)
Q Consensus       152 ~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  229 (515)
                      |+.+++.+..+.+|...|.+++|+|  ++..+++++.|+.|++||+.+++....+ .+|...|.+++|+|+++++++++.
T Consensus       685 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~-~~h~~~v~~~~~sp~~~~l~s~s~  763 (1249)
T 3sfz_A          685 DSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTM-FGHTNSVNHCRFSPDDELLASCSA  763 (1249)
T ss_dssp             ETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEE-CCCSSCEEEEEECSSTTEEEEEES
T ss_pred             ECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhhee-cCCCCCEEEEEEecCCCEEEEEEC
Confidence            9999999999999999999999999  5568999999999999999999998888 689999999999999999999999


Q ss_pred             CCcEEEEEccCCceee-----------------------------------------------------EEeeccccCce
Q psy17610        230 EGQVRIWKLTRESQSL-----------------------------------------------------QCVLKEHTSSV  256 (515)
Q Consensus       230 d~~i~iw~~~~~~~~~-----------------------------------------------------~~~~~~~~~~v  256 (515)
                      ||.|++||+.......                                                     .....+|...|
T Consensus       764 dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v  843 (1249)
T 3sfz_A          764 DGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTI  843 (1249)
T ss_dssp             SSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCC
T ss_pred             CCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCce
Confidence            9999999986432110                                                     01112678899


Q ss_pred             EEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC-ccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCce-------
Q psy17610        257 SVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP-SMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSI-------  328 (515)
Q Consensus       257 ~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~-------  328 (515)
                      .+++|+|++..+++++.|+.|++||+.++.....+..+ ..+.+++|+|+++.+++++.|+.+++|++.+...       
T Consensus       844 ~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~  923 (1249)
T 3sfz_A          844 QYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLK  923 (1249)
T ss_dssp             CEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEE
T ss_pred             EEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeeccc
Confidence            99999999999999999999999999999888777644 5799999999999999999999999999653110       


Q ss_pred             ----------------------EEEEe-------cCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCC
Q psy17610        329 ----------------------IRSLE-------GSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHA  379 (515)
Q Consensus       329 ----------------------~~~~~-------~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~  379 (515)
                                            .....       ......+.+++++|+++++++|+.+|.|++||+.+++....+.+|.
T Consensus       924 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~ 1003 (1249)
T 3sfz_A          924 QEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHK 1003 (1249)
T ss_dssp             EEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCS
T ss_pred             ceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCC
Confidence                                  00000       0112578999999999999999999999999999999999999999


Q ss_pred             CCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCccccee--------------------eecccccccceeeec
Q psy17610        380 ASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSK--------------------ISRSTARSTRLIIMI  439 (515)
Q Consensus       380 ~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~  439 (515)
                      ..|++++|+|++++|++++.||.|++|++................                    ...............
T Consensus      1004 ~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~ 1083 (1249)
T 3sfz_A         1004 KAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTC 1083 (1249)
T ss_dssp             SCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEEC
T ss_pred             CceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcc
Confidence            999999999999999999999999999998764321111100000                    000011112223456


Q ss_pred             CcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEEEEEE
Q psy17610        440 LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLY  513 (515)
Q Consensus       440 ~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~  513 (515)
                      |...|.+++|+|+++++++++.||.|++||+.+++++..+.+|. ..|++++|+|+|++|++++.||.|++||+
T Consensus      1084 ~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~-~~v~~~~~s~dg~~lat~~~dg~i~vwd~ 1156 (1249)
T 3sfz_A         1084 HQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHN-GCVRCSAFSLDGILLATGDDNGEIRIWNV 1156 (1249)
T ss_dssp             CSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBCCCCCS-SCEEEEEECSSSSEEEEEETTSCCCEEES
T ss_pred             cCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcceeeeeccCC-CcEEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence            78889999999999999999999999999999999999999987 89999999999999999999999999995

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.8e-55  Score=445.47  Aligned_cols=422  Identities=10%  Similarity=0.078  Sum_probs=331.4

Q ss_pred             EEEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeC
Q psy17610         74 ALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSV  153 (515)
Q Consensus        74 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~  153 (515)
                      .....+|.+.|++++|+|++++||+|+.||.|++|+..+.+ ....+ .|..+|.+++|+| +++|++++.|++|++||+
T Consensus        10 ~~~~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~-~~~~~-~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~   86 (902)
T 2oaj_A           10 ETNKYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVE-VVIKL-EDRSAIKEMRFVK-GIYLVVINAKDTVYVLSL   86 (902)
T ss_dssp             EEEEEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCE-EEEEC-SSCCCEEEEEEET-TTEEEEEETTCEEEEEET
T ss_pred             cccccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcE-EEEEc-CCCCCEEEEEEcC-CCEEEEEECcCeEEEEEC
Confidence            34456899999999999999999999999999999998743 33333 4888999999999 789999999999999999


Q ss_pred             CCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEE----------EecCCCCCCeEEEEEcCC-CC
Q psy17610        154 RTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKF----------IIPNAHNRGVTALAITQD-GT  222 (515)
Q Consensus       154 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~----------~~~~~~~~~v~~~~~~~~-~~  222 (515)
                      ++++.+..+. +...|++++|+|++++|++|+.||.|++||+++++...          ....+|..+|.+++|+|+ +.
T Consensus        87 ~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~  165 (902)
T 2oaj_A           87 YSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIG  165 (902)
T ss_dssp             TTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEE
T ss_pred             CCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCC
Confidence            9999988886 66789999999999999999999999999999887641          112578999999999995 57


Q ss_pred             EEEEecCCCcEEEEEccCCceeeEEeeccc------------------cCceEEEEEecCCCEEEEEeCCCcEEEEEccc
Q psy17610        223 RLLSGGGEGQVRIWKLTRESQSLQCVLKEH------------------TSSVSVIQIKSDSKEAMSASTDGTCVLWDLIK  284 (515)
Q Consensus       223 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~------------------~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~  284 (515)
                      .+++|+.|+.| +||++..  .....+..|                  ...|.+++|+|++++|++++.||+|++||+++
T Consensus       166 ~l~~g~~dg~v-lWd~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~  242 (902)
T 2oaj_A          166 TVLISYEYVTL-TYSLVEN--EIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANS  242 (902)
T ss_dssp             EEEEECSSCEE-EEETTTT--EEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTT
T ss_pred             EEEEEeCCCcE-EEECCCC--ceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCC
Confidence            89999999999 9999643  344444443                  57899999999999999999999999999999


Q ss_pred             ceEEEEEE-------------------cCccEEEEEEc----CCC-cEEEEEECC-----CeEEEEeCC-----------
Q psy17610        285 STRLIIMI-------------------LPSMIMSAAYH----PSE-VQLITCSTN-----KMIDYWETC-----------  324 (515)
Q Consensus       285 ~~~~~~~~-------------------~~~~~~~~~~~----~~~-~~l~~~~~~-----~~i~~~d~~-----------  324 (515)
                      ++.+....                   +...|.+++|+    |++ ..+++++.+     ..+.+|++.           
T Consensus       243 g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~  322 (902)
T 2oaj_A          243 GHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYE  322 (902)
T ss_dssp             CCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHH
T ss_pred             CcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchh
Confidence            88765421                   12369999995    444 456666565     378888842           


Q ss_pred             -------CCceEEEEecCCCccEEEEEEcC----------CCCEEEEEcCCCeEEEEEccCCeeeee-------------
Q psy17610        325 -------DGSIIRSLEGSDVAAVNCVDFVD----------DGKYFLTGGADQIVKMWMYREGVPCFV-------------  374 (515)
Q Consensus       325 -------~~~~~~~~~~~~~~~i~~~~~~~----------~~~~l~~~~~dg~i~i~d~~~~~~~~~-------------  374 (515)
                             +.+....+...+...+..+.+.+          +...+++++.||.|++||+.++.....             
T Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~  402 (902)
T 2oaj_A          323 GMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRP  402 (902)
T ss_dssp             HHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTT
T ss_pred             hhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCC
Confidence                   22334444433336777888755          344788889999999999977643321             


Q ss_pred             ----------------------------ccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeee
Q psy17610        375 ----------------------------GIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKIS  426 (515)
Q Consensus       375 ----------------------------~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~  426 (515)
                                                  +.+|...+.+++|+|++++|++++.|++|++||+......  ....+.... 
T Consensus       403 ~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~--~~~~~~~~l-  479 (902)
T 2oaj_A          403 LATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQ--DNASFEVNL-  479 (902)
T ss_dssp             BEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTT--TTBCEEEEH-
T ss_pred             CeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCcccc--CCceEEeec-
Confidence                                        2334444555666899999999999999999999876311  000000000 


Q ss_pred             cccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCe--------------------------------
Q psy17610        427 RSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGS--------------------------------  474 (515)
Q Consensus       427 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~--------------------------------  474 (515)
                            .+.....|...|.+++|+|++++||+|+.||+|++||+.+++                                
T Consensus       480 ------~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  553 (902)
T 2oaj_A          480 ------SRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDV  553 (902)
T ss_dssp             ------HHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEEC
T ss_pred             ------hhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccc
Confidence                  000112577889999999999999999999999999998762                                


Q ss_pred             -------------eeeeecccccceEEEEEEcCCCcEEEEeecCCeEEEEEE
Q psy17610        475 -------------IIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLY  513 (515)
Q Consensus       475 -------------~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~  513 (515)
                                   ++..+.+|. +.|++++||||| +||+|+.||+|++||.
T Consensus       554 ~~~~~~~~~~g~~~~~~l~~h~-~~V~svafSpdG-~lAsgs~D~tv~lwd~  603 (902)
T 2oaj_A          554 RDRAPTGVRQGFMPSTAVHANK-GKTSAINNSNIG-FVGIAYAAGSLMLIDR  603 (902)
T ss_dssp             GGGCCTTCSEEEEEEEEECCCS-CSEEEEEECBTS-EEEEEETTSEEEEEET
T ss_pred             cccCCCCCCCccceeEEEEcCC-CcEEEEEecCCc-EEEEEeCCCcEEEEEC
Confidence                         466778877 999999999999 9999999999999993

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=100.00  E-value=4.4e-55  Score=434.63  Aligned_cols=425  Identities=13%  Similarity=0.141  Sum_probs=353.2

Q ss_pred             cCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCc---eeEEeeccCccC-eEEEEeCC--CCcEEEEEecCCcEEEEe
Q psy17610         79 KDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGF---TLTLVNTCHTSA-IYDLQFPV--NFSSVFATCSKNDIRIWS  152 (515)
Q Consensus        79 ~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~---~~~~~~~~h~~~-v~~~~~~~--~~~~l~~~~~d~~i~iw~  152 (515)
                      .|.+.|++++|+|++++||+++ ++.|++||++++.   .....+.+|.+. |.+++|+|  ++++|++++.|+.|++||
T Consensus        16 ~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~   94 (615)
T 1pgu_A           16 TQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWG   94 (615)
T ss_dssp             CCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEE
T ss_pred             CccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEe
Confidence            5889999999999999999998 7899999999851   345566789999 99999999  999999999999999999


Q ss_pred             CCCC--------ceeEEEEecCeEEEEEEEeeCCCEEEEEeCC----CeEEEEecCCCceEEEecCCCCCCeEEEEEcCC
Q psy17610        153 VRTL--------NELLRISVMNMICACIVFTYDGKAILSGWND----GFIRCFTPQSGKLKFIIPNAHNRGVTALAITQD  220 (515)
Q Consensus       153 ~~~~--------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  220 (515)
                      +.++        +.+..+..|...|.+++|+|++++|++++.+    +.|.+||  .++....+ ..|...|.+++|+|+
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~-~~~~~~v~~~~~~~~  171 (615)
T 1pgu_A           95 WTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEV-SGHSQRINACHLKQS  171 (615)
T ss_dssp             EEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEEC-CSCSSCEEEEEECSS
T ss_pred             CCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceee-ecCCccEEEEEECCC
Confidence            9855        6677788899999999999999999999987    6899998  56667666 689999999999999


Q ss_pred             CC-EEEEecCCCcEEEEEccCCceeeEEeeccccC---ceEEEEEecC-CCEEEEEeCCCcEEEEEcccceEEEEE----
Q psy17610        221 GT-RLLSGGGEGQVRIWKLTRESQSLQCVLKEHTS---SVSVIQIKSD-SKEAMSASTDGTCVLWDLIKSTRLIIM----  291 (515)
Q Consensus       221 ~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~---~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~----  291 (515)
                      ++ .+++++.|+.|++||+  ........+.+|..   .|.+++|+|+ ++++++++.|+.|++||+++++.+..+    
T Consensus       172 ~~~~l~~~~~d~~v~vwd~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~  249 (615)
T 1pgu_A          172 RPMRSMTVGDDGSVVFYQG--PPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQ  249 (615)
T ss_dssp             SSCEEEEEETTTEEEEEET--TTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTT
T ss_pred             CCcEEEEEeCCCcEEEEeC--CCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccc
Confidence            97 8999999999999998  45566777888999   9999999999 999999999999999999999998888    


Q ss_pred             -EcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCC---CccEEEEEEcCCCCEEEEEcCCCeEEEEEcc
Q psy17610        292 -ILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSD---VAAVNCVDFVDDGKYFLTGGADQIVKMWMYR  367 (515)
Q Consensus       292 -~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~  367 (515)
                       .+...+.+++|+ ++.++++++.++.|++||+++++.+..+..+.   ...+.++.+. +++++++++.||.|++||+.
T Consensus       250 ~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~  327 (615)
T 1pgu_A          250 EPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELG  327 (615)
T ss_dssp             BCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETT
T ss_pred             cccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECC
Confidence             566789999999 99999999999999999999999999888662   3567788885 88999999999999999999


Q ss_pred             CCeeeeeccCCCCCeeEEEECCC---------------------------------CcEEEEEeCCCcEEEEeCCCCcCc
Q psy17610        368 EGVPCFVGIGHAASITKIKISPD---------------------------------KKVIVSVSADGGIFLWTFPELEDD  414 (515)
Q Consensus       368 ~~~~~~~~~~~~~~i~~~~~~~~---------------------------------~~~l~~~~~dg~i~iw~~~~~~~~  414 (515)
                      +++++..+.+|...|++++| |+                                 ++.|++++.|+.+++|++......
T Consensus       328 ~~~~~~~~~~~~~~v~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~  406 (615)
T 1pgu_A          328 HDEVLKTISGHNKGITALTV-NPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFG  406 (615)
T ss_dssp             EEEEEEEECCCSSCEEEEET-TTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECS
T ss_pred             CCcEEEEEeCCCCCEEEEEe-cCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCccc
Confidence            98888888888877777777 65                                 445555555555555554332100


Q ss_pred             cC---------------------------CCcc---------c----------------ceeeecccccc--cc-eeeec
Q psy17610        415 VG---------------------------DSRS---------L----------------SSKISRSTARS--TR-LIIMI  439 (515)
Q Consensus       415 ~~---------------------------~~~~---------~----------------~~~~~~~~~~~--~~-~~~~~  439 (515)
                      ..                           ....         .                ...........  .. .....
T Consensus       407 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~  486 (615)
T 1pgu_A          407 SQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTP  486 (615)
T ss_dssp             SCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSC
T ss_pred             CCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCC
Confidence            00                           0000         0                00000000000  00 23445


Q ss_pred             CcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecc-cccceEEEEEEcC----------CCcEEEEeecCCeE
Q psy17610        440 LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEG-SDVAAVNCVDFVD----------DGKYFLTGGADQIV  508 (515)
Q Consensus       440 ~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~-~~~~~v~~~~~s~----------~~~~l~s~~~dg~v  508 (515)
                      |...|.+++|+|++++|++++.||.|++||+.+++++..+.+ |. ..|++++|+|          ++++|++++.||.|
T Consensus       487 ~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~-~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i  565 (615)
T 1pgu_A          487 LRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRT-SKINAISWKPAEKGANEEEIEEDLVATGSLDTNI  565 (615)
T ss_dssp             CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCS-SCEEEEEECCCC------CCSCCEEEEEETTSCE
T ss_pred             ccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCC-CceeEEEEcCccccccccccCCCEEEEEcCCCcE
Confidence            778899999999999999999999999999999999999988 65 9999999999          99999999999999


Q ss_pred             EEEEE
Q psy17610        509 KICLY  513 (515)
Q Consensus       509 ~iw~~  513 (515)
                      ++|++
T Consensus       566 ~iw~~  570 (615)
T 1pgu_A          566 FIYSV  570 (615)
T ss_dssp             EEEES
T ss_pred             EEEEC
Confidence            99986

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=100.00  E-value=1.2e-52  Score=430.62  Aligned_cols=426  Identities=14%  Similarity=0.207  Sum_probs=359.4

Q ss_pred             CccCCCCceEEEecCCCCeEEEEcCCCCCCcccccccceEEeeccccccccccccccccccCcceeeeccceEEEEEecC
Q psy17610          1 MKTTPNDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMGCYGKLIKKKVSTKLKDVNAEDVSLYSAGVTALYLLKD   80 (515)
Q Consensus         1 ~~~~~~~~~~~~g~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (515)
                      |+|+|++.+|++|+.+|.|.+||+.++.                                            ....+.+|
T Consensus        19 i~~sp~~~~la~~~~~g~v~iwd~~~~~--------------------------------------------~~~~~~~~   54 (814)
T 3mkq_A           19 IDFHPTEPWVLTTLYSGRVEIWNYETQV--------------------------------------------EVRSIQVT   54 (814)
T ss_dssp             EEECSSSSEEEEEETTSEEEEEETTTTE--------------------------------------------EEEEEECC
T ss_pred             EEECCCCCEEEEEeCCCEEEEEECCCCc--------------------------------------------eEEEEecC
Confidence            4789999999999999999999977541                                            12234479


Q ss_pred             CCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCC-cee
Q psy17610         81 DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTL-NEL  159 (515)
Q Consensus        81 ~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~-~~~  159 (515)
                      .++|++++|+|++++|++|+.||.|++||+.++..+ ..+.+|.+.|.+++|+|++++|++++.|+.|++||++++ ...
T Consensus        55 ~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~  133 (814)
T 3mkq_A           55 ETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKV-VDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALE  133 (814)
T ss_dssp             SSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEE-EEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEE
T ss_pred             CCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEE-EEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEE
Confidence            999999999999999999999999999999997544 455679999999999999999999999999999999987 667


Q ss_pred             EEEEecCeEEEEEEEee-CCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcC--CCCEEEEecCCCcEEEE
Q psy17610        160 LRISVMNMICACIVFTY-DGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQ--DGTRLLSGGGEGQVRIW  236 (515)
Q Consensus       160 ~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~iw  236 (515)
                      ..+..|...|.+++|+| +++.+++++.||.|++||+.+++....+...+...+.+++|+|  ++.++++++.||.|++|
T Consensus       134 ~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~  213 (814)
T 3mkq_A          134 QTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIW  213 (814)
T ss_dssp             EEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEE
T ss_pred             EEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEE
Confidence            77888999999999999 8899999999999999999988887777566668999999999  99999999999999999


Q ss_pred             EccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC-ccEEEEEEcCCCcE-EEEEEC
Q psy17610        237 KLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP-SMIMSAAYHPSEVQ-LITCST  314 (515)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~-l~~~~~  314 (515)
                      |+.  .......+.+|...|.+++|+|+++++++++.||.|++||+.+++....+..+ ..+.+++|+|++.. +++.+.
T Consensus       214 d~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~  291 (814)
T 3mkq_A          214 DYQ--TKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGF  291 (814)
T ss_dssp             ETT--TTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEE
T ss_pred             ECC--CCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEe
Confidence            995  44567778889999999999999999999999999999999998888877655 58999999999874 245555


Q ss_pred             CCeEEEEeCCCCceEEEEe------------------------------------------cCCCccEEEEEEcCCCCEE
Q psy17610        315 NKMIDYWETCDGSIIRSLE------------------------------------------GSDVAAVNCVDFVDDGKYF  352 (515)
Q Consensus       315 ~~~i~~~d~~~~~~~~~~~------------------------------------------~~~~~~i~~~~~~~~~~~l  352 (515)
                      ++.+.+|++........+.                                          ......+.+++|+|+|+++
T Consensus       292 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l  371 (814)
T 3mkq_A          292 DNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFV  371 (814)
T ss_dssp             TTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEE
T ss_pred             CCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCceeEECCCCCEE
Confidence            6778888876543322221                                          1122357899999999999


Q ss_pred             EEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccc
Q psy17610        353 LTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARS  432 (515)
Q Consensus       353 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~  432 (515)
                      ++++ ++.+.+|++......     +.+.+.+++|+|+++++++++.+|.+++|+...                      
T Consensus       372 a~~~-~~~~~i~~~~~~~~~-----~~~~i~~~~~spdg~~la~~~~~g~v~l~~~~~----------------------  423 (814)
T 3mkq_A          372 TVVG-DGEYVIYTALAWRNK-----AFGKCQDFVWGPDSNSYALIDETGQIKYYKNFK----------------------  423 (814)
T ss_dssp             EEEE-TTEEEEEETTTTEEE-----EEEECSEEEECTTSSCEEEECTTCCEEEEETTE----------------------
T ss_pred             EEec-CCEEEEEECcccccc-----CCCceEEEEEeCCCCeEEEEeCCCcEEEEECCC----------------------
Confidence            9998 899999998654332     346788999999999999999999999996321                      


Q ss_pred             cceeeecCcccEEEeeeccCC---cEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEe------e
Q psy17610        433 TRLIIMILPSMIMSAAYHPSE---VQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTG------G  503 (515)
Q Consensus       433 ~~~~~~~~~~~i~~~~~s~~~---~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~------~  503 (515)
                            .+...+..+.|+|++   .+|++++.|+.|++||+.+++++..+..+. .   .++|+|||++|+++      +
T Consensus       424 ------~~~~~v~~~~~s~dg~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~-~---~v~~s~dg~~la~~~~~~~~~  493 (814)
T 3mkq_A          424 ------EVTSWSVPMHSAIDRLFSGALLGVKSDGFVYFFDWDNGTLVRRIDVNA-K---DVIWSDNGELVMIVNTNSNGD  493 (814)
T ss_dssp             ------ECTTCCCCCSSCCCEEECSSSEEEEETTEEEEECTTTCCEEEEESSCE-E---EEEECTTSSEEEEEECCCSSC
T ss_pred             ------CccceEEcCCcCccceecceEEEEecCCEEEEEECCcCcEEEEEecCC-C---EEEEcCCCCEEEEEEcCcccC
Confidence                  133457888999998   688999999999999999999999998875 2   89999999999999      6


Q ss_pred             cCCeEEEE
Q psy17610        504 ADQIVKIC  511 (515)
Q Consensus       504 ~dg~v~iw  511 (515)
                      .++.+.+|
T Consensus       494 ~~~~~~~~  501 (814)
T 3mkq_A          494 EASGYTLL  501 (814)
T ss_dssp             SCSEEEEE
T ss_pred             CceEEEEE
Confidence            66655554

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=100.00  E-value=3.4e-51  Score=419.76  Aligned_cols=399  Identities=14%  Similarity=0.176  Sum_probs=340.0

Q ss_pred             EEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCC
Q psy17610         75 LYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVR  154 (515)
Q Consensus        75 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~  154 (515)
                      ..+.+|.+.|++++|+|++++||+|+.||.|++||+.++.. ...+.+|.++|.+++|+|++++|++++.|+.|++||+.
T Consensus         7 ~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~-~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~   85 (814)
T 3mkq_A            7 KTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVE-VRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYN   85 (814)
T ss_dssp             EEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEE-EEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETT
T ss_pred             eeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCce-EEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECC
Confidence            45678999999999999999999999999999999999654 44556799999999999999999999999999999999


Q ss_pred             CCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcC-CCCEEEEecCCCcE
Q psy17610        155 TLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQ-DGTRLLSGGGEGQV  233 (515)
Q Consensus       155 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i  233 (515)
                      +++.+..+..|...|.+++|+|++++|++++.||.|++||++++........+|...|.+++|+| +++.+++++.||.|
T Consensus        86 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v  165 (814)
T 3mkq_A           86 TGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTV  165 (814)
T ss_dssp             TCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEE
T ss_pred             CCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeE
Confidence            99999999999999999999999999999999999999999987443333368999999999999 88999999999999


Q ss_pred             EEEEccCCceeeEEeec-cccCceEEEEEec--CCCEEEEEeCCCcEEEEEcccceEEEEEEc-CccEEEEEEcCCCcEE
Q psy17610        234 RIWKLTRESQSLQCVLK-EHTSSVSVIQIKS--DSKEAMSASTDGTCVLWDLIKSTRLIIMIL-PSMIMSAAYHPSEVQL  309 (515)
Q Consensus       234 ~iw~~~~~~~~~~~~~~-~~~~~v~~~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l  309 (515)
                      ++||+.....  ...+. .+...+..++|+|  ++.++++++.||.|++||+.+++....+.. ...+.+++|+|+++++
T Consensus       166 ~vwd~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  243 (814)
T 3mkq_A          166 KVWSLGQSTP--NFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPII  243 (814)
T ss_dssp             EEEETTCSSC--SEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEE
T ss_pred             EEEECCCCcc--eeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEE
Confidence            9999964332  33333 4458899999999  999999999999999999999998888774 4689999999999999


Q ss_pred             EEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCC--EEEEEcCCCeEEEEEccCCee----------ee----
Q psy17610        310 ITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGK--YFLTGGADQIVKMWMYREGVP----------CF----  373 (515)
Q Consensus       310 ~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~----------~~----  373 (515)
                      ++++.||.|++||+.+++.+..+..+. ..+.+++|+|++.  +++++. ++.+.+|++.....          +.    
T Consensus       244 ~~~~~dg~v~vwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  321 (814)
T 3mkq_A          244 ISGSEDGTLKIWNSSTYKVEKTLNVGL-ERSWCIATHPTGRKNYIASGF-DNGFTVLSLGNDEPTLSLDPVGKLVWSGGK  321 (814)
T ss_dssp             EEEETTSCEEEEETTTCSEEEEECCSS-SSEEEEEECTTCGGGEEEEEE-TTEEEEEECSCCSCCEEECSSSEEEEECCT
T ss_pred             EEEeCCCeEEEEECCCCcEEEEeecCC-CcEEEEEEccCCCceEEEEEe-CCCEEEEEcCCCCceeEECCCCCEEEECcc
Confidence            999999999999999999999988776 7999999999987  455555 66788888754321          11    


Q ss_pred             -----------------------------eccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCccccee
Q psy17610        374 -----------------------------VGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSK  424 (515)
Q Consensus       374 -----------------------------~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~  424 (515)
                                                   .+..+...+.+++|+|+++++++++ ++.+.+|++.....           
T Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~-~~~~~i~~~~~~~~-----------  389 (814)
T 3mkq_A          322 NAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVG-DGEYVIYTALAWRN-----------  389 (814)
T ss_dssp             TSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEEE-TTEEEEEETTTTEE-----------
T ss_pred             cccceeeeeeecccccccccCccceeeeecCCCCccCCceeEECCCCCEEEEec-CCEEEEEECccccc-----------
Confidence                                         1123455689999999999999998 89999999753210           


Q ss_pred             eecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCC---cEEEE
Q psy17610        425 ISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDG---KYFLT  501 (515)
Q Consensus       425 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~---~~l~s  501 (515)
                                    .+.+.+.+++|+|+++++++++.+|.|++|+.        +.+|. ..+.+++|+|++   ++|++
T Consensus       390 --------------~~~~~i~~~~~spdg~~la~~~~~g~v~l~~~--------~~~~~-~~v~~~~~s~dg~~~~~l~~  446 (814)
T 3mkq_A          390 --------------KAFGKCQDFVWGPDSNSYALIDETGQIKYYKN--------FKEVT-SWSVPMHSAIDRLFSGALLG  446 (814)
T ss_dssp             --------------EEEEECSEEEECTTSSCEEEECTTCCEEEEET--------TEECT-TCCCCCSSCCCEEECSSSEE
T ss_pred             --------------cCCCceEEEEEeCCCCeEEEEeCCCcEEEEEC--------CCCcc-ceEEcCCcCccceecceEEE
Confidence                          01244789999999999999999999999963        34444 678899999998   68999


Q ss_pred             eecCCeEEEEEE
Q psy17610        502 GGADQIVKICLY  513 (515)
Q Consensus       502 ~~~dg~v~iw~~  513 (515)
                      ++.||.|++||+
T Consensus       447 ~~~d~~v~~~d~  458 (814)
T 3mkq_A          447 VKSDGFVYFFDW  458 (814)
T ss_dssp             EEETTEEEEECT
T ss_pred             EecCCEEEEEEC
Confidence            999999999985

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=2.1e-48  Score=351.66  Aligned_cols=286  Identities=22%  Similarity=0.350  Sum_probs=261.3

Q ss_pred             CCCCCCeEEEEEcCC----CCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEE
Q psy17610        206 NAHNRGVTALAITQD----GTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWD  281 (515)
Q Consensus       206 ~~~~~~v~~~~~~~~----~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd  281 (515)
                      .+|...|.+++|+|+    +.+|++|+.|+.|++|++..........+.+|...|.++++++++..+++++.|++|++||
T Consensus        29 ~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd  108 (321)
T 3ow8_A           29 QAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWD  108 (321)
T ss_dssp             TSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred             ccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEE
Confidence            689999999999874    6789999999999999997665566677899999999999999999999999999999999


Q ss_pred             cccceEEEEEEcC-ccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCe
Q psy17610        282 LIKSTRLIIMILP-SMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQI  360 (515)
Q Consensus       282 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~  360 (515)
                      +.+++.+..+... ..+.+++|+|+++++++++.++.+++||+++++....+..+. ..+.+++|+|++++|++|+.||.
T Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~-~~v~~~~~spdg~~lasg~~dg~  187 (321)
T 3ow8_A          109 LENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRG-KFILSIAYSPDGKYLASGAIDGI  187 (321)
T ss_dssp             TTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSS-SCEEEEEECTTSSEEEEEETTSC
T ss_pred             CCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCC-ceEEEEEECCCCCEEEEEcCCCe
Confidence            9999988877654 478899999999999999999999999999999998888776 78999999999999999999999


Q ss_pred             EEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecC
Q psy17610        361 VKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMIL  440 (515)
Q Consensus       361 i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  440 (515)
                      |++||+++++.+..+.+|..+|++++|+|++++|++++.|+.|++||++....                    ...+.+|
T Consensus       188 i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~--------------------~~~~~~h  247 (321)
T 3ow8_A          188 INIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANL--------------------AGTLSGH  247 (321)
T ss_dssp             EEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCE--------------------EEEECCC
T ss_pred             EEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcce--------------------eEEEcCC
Confidence            99999999999999999999999999999999999999999999999875421                    1234457


Q ss_pred             cccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEEEEEE
Q psy17610        441 PSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLY  513 (515)
Q Consensus       441 ~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~  513 (515)
                      ...|.+++|+|++++|++++.|+.|++||+.+++++..+.+|. ..|.+++|+|++++|++++.||.|++||+
T Consensus       248 ~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~-~~v~~v~~s~~g~~l~s~~~d~~i~vwd~  319 (321)
T 3ow8_A          248 ASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQ-DQVWGVKYNGNGSKIVSVGDDQEIHIYDC  319 (321)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCS-SCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred             CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCC-CcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence            7889999999999999999999999999999999999999987 89999999999999999999999999995

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=1.7e-48  Score=365.24  Aligned_cols=288  Identities=19%  Similarity=0.302  Sum_probs=269.5

Q ss_pred             EEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecC
Q psy17610        117 TLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQ  196 (515)
Q Consensus       117 ~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~  196 (515)
                      ...+.+|.++|++++|+|+++.+++++.|++|++||+.+++....+.+|...|.+++|+|++++|++|+.|+.|++||+.
T Consensus       101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~  180 (410)
T 1vyh_C          101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ  180 (410)
T ss_dssp             SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT
T ss_pred             eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence            34567899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCc
Q psy17610        197 SGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGT  276 (515)
Q Consensus       197 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~  276 (515)
                      +++.+..+ .+|...|.+++|+|++++|++|+.|+.|++||+.  .......+.+|...|.++.++|++.++++++.|++
T Consensus       181 ~~~~~~~~-~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~--~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~  257 (410)
T 1vyh_C          181 GFECIRTM-HGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQ--TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT  257 (410)
T ss_dssp             SSCEEECC-CCCSSCEEEEEECSSSSEEEEEETTSEEEEEETT--TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred             CCceeEEE-cCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECC--CCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCe
Confidence            99988887 6899999999999999999999999999999995  45567778899999999999999999999999999


Q ss_pred             EEEEEcccceEEEEEEc-CccEEEEEEcCC--------------------CcEEEEEECCCeEEEEeCCCCceEEEEecC
Q psy17610        277 CVLWDLIKSTRLIIMIL-PSMIMSAAYHPS--------------------EVQLITCSTNKMIDYWETCDGSIIRSLEGS  335 (515)
Q Consensus       277 i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~--------------------~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~  335 (515)
                      |++||+.+++....+.. ...+.+++|+|+                    +.++++++.|+.|++||+++++++..+.+|
T Consensus       258 v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h  337 (410)
T 1vyh_C          258 VRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH  337 (410)
T ss_dssp             EEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred             EEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECC
Confidence            99999999988877754 457999999996                    668999999999999999999999999887


Q ss_pred             CCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeC
Q psy17610        336 DVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTF  408 (515)
Q Consensus       336 ~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~  408 (515)
                      . ..|.+++|+|++++|++++.||.|++||+.+++++..+.+|...|++++|+|++.+|++++.|+.|++|++
T Consensus       338 ~-~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~  409 (410)
T 1vyh_C          338 D-NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC  409 (410)
T ss_dssp             S-SCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred             C-CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence            6 88999999999999999999999999999999999999999999999999999999999999999999986

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=3.8e-48  Score=362.84  Aligned_cols=288  Identities=20%  Similarity=0.370  Sum_probs=266.5

Q ss_pred             EEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCC
Q psy17610         75 LYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVR  154 (515)
Q Consensus        75 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~  154 (515)
                      ..+.+|.++|++++|+|++++|++|+.||.|++||+.++. ....+.+|.+.|.+++|+|++++|++++.|++|++||+.
T Consensus       102 ~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~-~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~  180 (410)
T 1vyh_C          102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD-FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ  180 (410)
T ss_dssp             CEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCC-CCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT
T ss_pred             EeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc-EEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence            4567899999999999999999999999999999999964 455677899999999999999999999999999999999


Q ss_pred             CCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEE
Q psy17610        155 TLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVR  234 (515)
Q Consensus       155 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~  234 (515)
                      +++.+..+.+|...|.+++|+|++++|++++.|+.|++||+++++....+ .+|...|.++.++|++.+|++|+.|+.|+
T Consensus       181 ~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~-~~h~~~v~~~~~~~~g~~l~s~s~D~~v~  259 (410)
T 1vyh_C          181 GFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWVRMVRPNQDGTLIASCSNDQTVR  259 (410)
T ss_dssp             SSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEE-ECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred             CCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEE-eCCCccEEEEEECCCCCEEEEEcCCCeEE
Confidence            99999999999999999999999999999999999999999999998888 68999999999999999999999999999


Q ss_pred             EEEccCCceeeEEeeccccCceEEEEEecC--------------------CCEEEEEeCCCcEEEEEcccceEEEEEEc-
Q psy17610        235 IWKLTRESQSLQCVLKEHTSSVSVIQIKSD--------------------SKEAMSASTDGTCVLWDLIKSTRLIIMIL-  293 (515)
Q Consensus       235 iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~--------------------~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-  293 (515)
                      +||+.  .......+.+|...|.+++|+|+                    +.++++++.|++|++||+++++.+..+.. 
T Consensus       260 vwd~~--~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h  337 (410)
T 1vyh_C          260 VWVVA--TKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH  337 (410)
T ss_dssp             EEETT--TCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred             EEECC--CCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECC
Confidence            99995  44566678899999999999996                    67899999999999999999998887764 


Q ss_pred             CccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEcc
Q psy17610        294 PSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYR  367 (515)
Q Consensus       294 ~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~  367 (515)
                      ...+.+++|+|+++++++++.|+.|++||+.+++++..+..|. ..|.+++|+|++.+|++|+.||.|++|+++
T Consensus       338 ~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~-~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r  410 (410)
T 1vyh_C          338 DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHE-HFVTSLDFHKTAPYVVTGSVDQTVKVWECR  410 (410)
T ss_dssp             SSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCS-SCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred             CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCC-CcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence            4579999999999999999999999999999999999998876 899999999999999999999999999863

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=8.1e-48  Score=347.89  Aligned_cols=290  Identities=17%  Similarity=0.300  Sum_probs=263.9

Q ss_pred             EEEEecCCCcEEEEEEecC----CCEEEEEecCceEEEEECCCCce-eEEeeccCccCeEEEEeCCCCcEEEEEecCCcE
Q psy17610         74 ALYLLKDDSGISSLQYNPV----NNKVFVGTVNCEIFLIDMNSGFT-LTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDI  148 (515)
Q Consensus        74 ~~~~~~~~~~v~~~~~s~~----~~~l~~~~~d~~i~iw~~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i  148 (515)
                      ...+.+|.+.|.+++|+|+    +++|++|+.|++|++|++.++.. ....+.+|...|.+++|+|++..+++++.|++|
T Consensus        25 ~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i  104 (321)
T 3ow8_A           25 FKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHI  104 (321)
T ss_dssp             EEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEE
T ss_pred             eeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcE
Confidence            3445689999999999985    67999999999999999987543 344678999999999999999999999999999


Q ss_pred             EEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEec
Q psy17610        149 RIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGG  228 (515)
Q Consensus       149 ~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  228 (515)
                      ++||+.+++.+..+..+...+.+++|+|++++|++++.++.|++|++++++....+ ..|...|.+++|+|++++|++|+
T Consensus       105 ~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~-~~~~~~v~~~~~spdg~~lasg~  183 (321)
T 3ow8_A          105 RLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSL-DTRGKFILSIAYSPDGKYLASGA  183 (321)
T ss_dssp             EEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEE-ECSSSCEEEEEECTTSSEEEEEE
T ss_pred             EEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEe-cCCCceEEEEEECCCCCEEEEEc
Confidence            99999999999999999889999999999999999999999999999999988877 57888999999999999999999


Q ss_pred             CCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC-ccEEEEEEcCCCc
Q psy17610        229 GEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP-SMIMSAAYHPSEV  307 (515)
Q Consensus       229 ~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~  307 (515)
                      .|+.|++||+.  +......+.+|..+|.+++|+|++++|++++.|++|++||+++++....+..+ ..+.+++|+|++.
T Consensus       184 ~dg~i~iwd~~--~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~  261 (321)
T 3ow8_A          184 IDGIINIFDIA--TGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDT  261 (321)
T ss_dssp             TTSCEEEEETT--TTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS
T ss_pred             CCCeEEEEECC--CCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCC
Confidence            99999999995  45667788999999999999999999999999999999999998888777644 5799999999999


Q ss_pred             EEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEcc
Q psy17610        308 QLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYR  367 (515)
Q Consensus       308 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~  367 (515)
                      +|++++.|+.|++||+.+++++..+..+. ..|.+++|+|++++|++++.||.|++||..
T Consensus       262 ~l~s~s~D~~v~iwd~~~~~~~~~~~~h~-~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p  320 (321)
T 3ow8_A          262 HFVSSSSDKSVKVWDVGTRTCVHTFFDHQ-DQVWGVKYNGNGSKIVSVGDDQEIHIYDCP  320 (321)
T ss_dssp             EEEEEETTSCEEEEETTTTEEEEEECCCS-SCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred             EEEEEeCCCcEEEEeCCCCEEEEEEcCCC-CcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence            99999999999999999999999998876 899999999999999999999999999963

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=3.3e-47  Score=347.71  Aligned_cols=287  Identities=18%  Similarity=0.273  Sum_probs=262.5

Q ss_pred             EEEEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEe
Q psy17610         73 TALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWS  152 (515)
Q Consensus        73 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~  152 (515)
                      ....+.+|.+.|.+++|+|++++|++|+.||.|++||..++..+ ..+..|...|.+++|+|+++++++++.|+.+++|+
T Consensus        47 ~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~  125 (340)
T 1got_B           47 TRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKV-HAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN  125 (340)
T ss_dssp             EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEE-EEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEE
T ss_pred             hheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcc-eEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence            34567899999999999999999999999999999999986544 45567999999999999999999999999999999


Q ss_pred             CCCCc----eeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEec
Q psy17610        153 VRTLN----ELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGG  228 (515)
Q Consensus       153 ~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  228 (515)
                      +.+++    ....+.+|...+.++.|++++. +++++.|+.|++||+++++....+ .+|...|.+++|+|+++++++|+
T Consensus       126 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~sg~  203 (340)
T 1got_B          126 LKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTF-TGHTGDVMSLSLAPDTRLFVSGA  203 (340)
T ss_dssp             TTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEE-CCCSSCEEEEEECTTSSEEEEEE
T ss_pred             CccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEE-cCCCCceEEEEECCCCCEEEEEe
Confidence            98753    4566788999999999998875 899999999999999999998888 68999999999999999999999


Q ss_pred             CCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCc---cEEEEEEcCC
Q psy17610        229 GEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPS---MIMSAAYHPS  305 (515)
Q Consensus       229 ~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---~~~~~~~~~~  305 (515)
                      .|+.|++||++  .......+.+|...|.+++|+|++++|++++.|++|++||+++++.+..+.++.   .+.+++|+|+
T Consensus       204 ~d~~v~~wd~~--~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~  281 (340)
T 1got_B          204 CDASAKLWDVR--EGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKS  281 (340)
T ss_dssp             TTSCEEEEETT--TCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTT
T ss_pred             CCCcEEEEECC--CCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCC
Confidence            99999999995  455667788999999999999999999999999999999999988887776543   6999999999


Q ss_pred             CcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEE
Q psy17610        306 EVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWM  365 (515)
Q Consensus       306 ~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d  365 (515)
                      ++++++++.|+.|++||+.+++.+..+.+|. ..|.+++|+|+|++|++|+.|+.|++||
T Consensus       282 g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~-~~v~~~~~s~dg~~l~s~s~D~~i~iWd  340 (340)
T 1got_B          282 GRLLLAGYDDFNCNVWDALKADRAGVLAGHD-NRVSCLGVTDDGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             SSEEEEEETTSEEEEEETTTCCEEEEEECCS-SCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             CCEEEEECCCCeEEEEEcccCcEeeEeecCC-CcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence            9999999999999999999999999998876 8999999999999999999999999996

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=7.1e-47  Score=345.48  Aligned_cols=289  Identities=15%  Similarity=0.279  Sum_probs=263.6

Q ss_pred             eeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEe
Q psy17610        115 TLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFT  194 (515)
Q Consensus       115 ~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~  194 (515)
                      .....+.+|.++|.+++|+|++++|++++.|++|++||+.+++.+..+..|...|.+++|+|++++|++++.|+.+++|+
T Consensus        46 ~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~  125 (340)
T 1got_B           46 RTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN  125 (340)
T ss_dssp             CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEE
T ss_pred             hhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence            34566788999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCc----eEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEE
Q psy17610        195 PQSGK----LKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMS  270 (515)
Q Consensus       195 ~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  270 (515)
                      +.+++    ....+ .+|...|.++.|++++. +++++.|+.|++||+.  +......+.+|...|.+++|+|+++++++
T Consensus       126 ~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~--~~~~~~~~~~h~~~v~~~~~~~~~~~l~s  201 (340)
T 1got_B          126 LKTREGNVRVSREL-AGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIE--TGQQTTTFTGHTGDVMSLSLAPDTRLFVS  201 (340)
T ss_dssp             TTTCSBSCEEEEEE-ECCSSCEEEEEEEETTE-EEEEETTSCEEEEETT--TTEEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred             CccCCCcceeEEEe-cCCCccEEEEEECCCCc-EEEEECCCcEEEEECC--CCcEEEEEcCCCCceEEEEECCCCCEEEE
Confidence            98753    33444 68999999999998775 8899999999999995  45567778899999999999999999999


Q ss_pred             EeCCCcEEEEEcccceEEEEEEc-CccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCC-CccEEEEEEcCC
Q psy17610        271 ASTDGTCVLWDLIKSTRLIIMIL-PSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSD-VAAVNCVDFVDD  348 (515)
Q Consensus       271 ~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~i~~~~~~~~  348 (515)
                      ++.|++|++||+++++....+.. ...+.+++|+|+++++++++.|+.|++||+++++.+..+.... ...+.+++|+|+
T Consensus       202 g~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~  281 (340)
T 1got_B          202 GACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKS  281 (340)
T ss_dssp             EETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTT
T ss_pred             EeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCC
Confidence            99999999999999988887764 4579999999999999999999999999999998887775432 247999999999


Q ss_pred             CCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEe
Q psy17610        349 GKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWT  407 (515)
Q Consensus       349 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~  407 (515)
                      |++|++|+.||.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||
T Consensus       282 g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd  340 (340)
T 1got_B          282 GRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             CCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence            99999999999999999999999999999999999999999999999999999999996

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.5e-47  Score=360.22  Aligned_cols=331  Identities=16%  Similarity=0.207  Sum_probs=291.0

Q ss_pred             eEEEEEecCCCcEEEEEEecCCC-EEEEEecCceEEEEEC----CCCce-----eEEeecc----------CccCeEEEE
Q psy17610         72 VTALYLLKDDSGISSLQYNPVNN-KVFVGTVNCEIFLIDM----NSGFT-----LTLVNTC----------HTSAIYDLQ  131 (515)
Q Consensus        72 ~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~d~~i~iw~~----~~~~~-----~~~~~~~----------h~~~v~~~~  131 (515)
                      ...+....|.+.|++++|+|+++ +||+|+.||.|++|++    .++..     ....+..          |.+.|.+++
T Consensus        36 ~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  115 (425)
T 1r5m_A           36 VKILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLA  115 (425)
T ss_dssp             CEECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEE
T ss_pred             hhheeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEE
Confidence            34556667889999999999999 9999999999999999    87652     2222222          678999999


Q ss_pred             eCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCC
Q psy17610        132 FPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRG  211 (515)
Q Consensus       132 ~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~  211 (515)
                      |+|++++|++++.|+.|++|| .+++.+..+..|...|.+++|+|++++|++++.|+.|++||+.+++....+ ..+...
T Consensus       116 ~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-~~~~~~  193 (425)
T 1r5m_A          116 WSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHF-ELKETG  193 (425)
T ss_dssp             ECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEE-CCC---
T ss_pred             EcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEe-eccccC
Confidence            999999999999999999999 678888999999999999999999999999999999999999999988877 455555


Q ss_pred             ---------------eEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCc
Q psy17610        212 ---------------VTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGT  276 (515)
Q Consensus       212 ---------------v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~  276 (515)
                                     +.+++|+|++ .+++++.++.|++||+..  ......+..|...|.+++|+|+++++++++.|+.
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~  270 (425)
T 1r5m_A          194 GSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITE--KTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGT  270 (425)
T ss_dssp             ------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTC--SSCSEEECCCSSCEEEEEEETTTTEEEEEETTSC
T ss_pred             ccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCC--CceeeeeccCCCceEEEEECCCCCEEEEEcCCCE
Confidence                           8999999875 588899999999999964  4555667789999999999999999999999999


Q ss_pred             EEEEEcccceEEEEEE-cCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEE
Q psy17610        277 CVLWDLIKSTRLIIMI-LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTG  355 (515)
Q Consensus       277 i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~  355 (515)
                      |++||+++++....+. +...+.+++|+|++ .+++++.++.|++||+++++.+..+..+. ..+.+++|+|++++|+++
T Consensus       271 i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~i~~~~~s~~~~~l~~~  348 (425)
T 1r5m_A          271 LRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDG-VPIFAGRISQDGQKYAVA  348 (425)
T ss_dssp             EEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTT-CCEEEEEECTTSSEEEEE
T ss_pred             EEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCC-ccEEEEEEcCCCCEEEEE
Confidence            9999999988777775 55689999999999 99999999999999999999999988766 899999999999999999


Q ss_pred             cCCCeEEEEEccCCe--------------------eeeeccCCCC--CeeEEEECCCCcEEEEEeCCCcEEEEeCC
Q psy17610        356 GADQIVKMWMYREGV--------------------PCFVGIGHAA--SITKIKISPDKKVIVSVSADGGIFLWTFP  409 (515)
Q Consensus       356 ~~dg~i~i~d~~~~~--------------------~~~~~~~~~~--~i~~~~~~~~~~~l~~~~~dg~i~iw~~~  409 (515)
                      +.||.|++||+++++                    .+..+..|..  .|++++|+|++++|++++.||.|++|+++
T Consensus       349 ~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~  424 (425)
T 1r5m_A          349 FMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP  424 (425)
T ss_dssp             ETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred             ECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence            999999999999888                    8888999976  99999999999999999999999999985

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=8.2e-47  Score=339.35  Aligned_cols=292  Identities=20%  Similarity=0.246  Sum_probs=262.8

Q ss_pred             eeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEe
Q psy17610        115 TLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFT  194 (515)
Q Consensus       115 ~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~  194 (515)
                      .+...+.+|.+.|.+++|+|++++|++++.|++|++||+++++.+..+..|..+|.+++|+|++++|++++.|+.|++||
T Consensus         4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd   83 (304)
T 2ynn_A            4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN   83 (304)
T ss_dssp             CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred             eeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEE
Confidence            34567788999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEec-CCCEEEEEeC
Q psy17610        195 PQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKS-DSKEAMSAST  273 (515)
Q Consensus       195 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~  273 (515)
                      +.+++.+..+ .+|...|.+++|+|++++|++|+.|+.|++||++.. ......+.+|...|.+++|+| ++..+++++.
T Consensus        84 ~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~-~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~  161 (304)
T 2ynn_A           84 YNTGEKVVDF-EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENN-WALEQTFEGHEHFVMCVAFNPKDPSTFASGCL  161 (304)
T ss_dssp             TTTCCEEEEE-ECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGT-TEEEEEECCCCSCEEEEEECTTCTTEEEEEET
T ss_pred             CCCCcEEEEE-eCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCC-cchhhhhcccCCcEEEEEECCCCCCEEEEEeC
Confidence            9999998888 689999999999999999999999999999999643 345567889999999999999 6789999999


Q ss_pred             CCcEEEEEcccceEEEEEEc--CccEEEEEEcC--CCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCC
Q psy17610        274 DGTCVLWDLIKSTRLIIMIL--PSMIMSAAYHP--SEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDG  349 (515)
Q Consensus       274 d~~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~--~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~  349 (515)
                      |++|++||+++......+..  ...+..+.+.|  ++.++++++.|+.|++||+++++++..+..|. ..+.+++|+|++
T Consensus       162 D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~-~~v~~~~~~p~~  240 (304)
T 2ynn_A          162 DRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHM-SNVSFAVFHPTL  240 (304)
T ss_dssp             TSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCS-SCEEEEEECSSS
T ss_pred             CCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCC-CCEEEEEECCCC
Confidence            99999999987766555543  35688888876  77899999999999999999999999999887 899999999999


Q ss_pred             CEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCc--EEEEEeCCCcEEEEeCCC
Q psy17610        350 KYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKK--VIVSVSADGGIFLWTFPE  410 (515)
Q Consensus       350 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~--~l~~~~~dg~i~iw~~~~  410 (515)
                      ++|++|+.||.|++||.++++....+..|...+.+++|+|++.  ++++++.| .+.+|++..
T Consensus       241 ~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~-g~~~~~~~~  302 (304)
T 2ynn_A          241 PIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDN-GFTVLSLGN  302 (304)
T ss_dssp             SEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETT-EEEEEECC-
T ss_pred             CEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCC-ceEEEEecc
Confidence            9999999999999999999999999999999999999999875  57777655 577887754

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.5e-47  Score=360.22  Aligned_cols=342  Identities=16%  Similarity=0.226  Sum_probs=289.2

Q ss_pred             CcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCC-EEEEEeCCCeEEEEec----CCCc------eEEEecC--------
Q psy17610        146 NDIRIWSVRTLNELLRISVMNMICACIVFTYDGK-AILSGWNDGFIRCFTP----QSGK------LKFIIPN--------  206 (515)
Q Consensus       146 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~~~----~~~~------~~~~~~~--------  206 (515)
                      ..+.+|+++..........|...|.+++|+|+++ +|++++.||.|++|++    .+++      ....+..        
T Consensus        25 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (425)
T 1r5m_A           25 SIDSSDDLDGFVKILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASS  104 (425)
T ss_dssp             ---------CCCEECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC---
T ss_pred             cccccccchhhhhheeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccc
Confidence            3456888877666666667778999999999999 9999999999999999    8887      3444421        


Q ss_pred             -CCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccc
Q psy17610        207 -AHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKS  285 (515)
Q Consensus       207 -~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~  285 (515)
                       .|...|.+++|+|++++|++++.||.|++||.   .......+..|...|.+++|+|+++++++++.|+.|++||+.++
T Consensus       105 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~  181 (425)
T 1r5m_A          105 GKTTNQVTCLAWSHDGNSIVTGVENGELRLWNK---TGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISG  181 (425)
T ss_dssp             ---CBCEEEEEECTTSSEEEEEETTSCEEEEET---TSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTT
T ss_pred             cCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeC---CCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCC
Confidence             16779999999999999999999999999994   34566678899999999999999999999999999999999999


Q ss_pred             eEEEEEEcCcc----------------EEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCC
Q psy17610        286 TRLIIMILPSM----------------IMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDG  349 (515)
Q Consensus       286 ~~~~~~~~~~~----------------~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~  349 (515)
                      +....+..+..                +.+++|+|++ .+++++.++.|++||+.+++.+..+..+. ..+.+++|+|++
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~-~~i~~~~~~~~~  259 (425)
T 1r5m_A          182 TVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHH-GPISVLEFNDTN  259 (425)
T ss_dssp             EEEEEECCC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCS-SCEEEEEEETTT
T ss_pred             cEEEEeeccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCC-CceEEEEECCCC
Confidence            88887765543                7888999875 58889999999999999999988888766 899999999999


Q ss_pred             CEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeeccc
Q psy17610        350 KYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRST  429 (515)
Q Consensus       350 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~  429 (515)
                      ++|++++.||.|++||+++++....+..|...|.+++|+|++ ++++++.|+.|++||+.....                
T Consensus       260 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~----------------  322 (425)
T 1r5m_A          260 KLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTL----------------  322 (425)
T ss_dssp             TEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEE----------------
T ss_pred             CEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcE----------------
Confidence            999999999999999999999999999999999999999999 999999999999999876421                


Q ss_pred             ccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCe--------------------eeeeecccccc-eEE
Q psy17610        430 ARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGS--------------------IIRSLEGSDVA-AVN  488 (515)
Q Consensus       430 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~--------------------~~~~~~~~~~~-~v~  488 (515)
                          ......+...+.+++|+|++++|++++.||.|++||+.+++                    ++..+..|... .|.
T Consensus       323 ----~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  398 (425)
T 1r5m_A          323 ----LALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIF  398 (425)
T ss_dssp             ----EEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEE
T ss_pred             ----eEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceE
Confidence                12223456779999999999999999999999999999888                    88999988633 999


Q ss_pred             EEEEcCCCcEEEEeecCCeEEEEEE
Q psy17610        489 CVDFVDDGKYFLTGGADQIVKICLY  513 (515)
Q Consensus       489 ~~~~s~~~~~l~s~~~dg~v~iw~~  513 (515)
                      +++|+|++++|++++.||.|++|++
T Consensus       399 ~~~~s~~~~~l~~~~~dg~i~iw~~  423 (425)
T 1r5m_A          399 DLSWNCAGNKISVAYSLQEGSVVAI  423 (425)
T ss_dssp             EEEECTTSSEEEEEESSSCCEEEEC
T ss_pred             EEEccCCCceEEEEecCceEEEEee
Confidence            9999999999999999999999996

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=100.00  E-value=6.7e-46  Score=340.45  Aligned_cols=288  Identities=18%  Similarity=0.274  Sum_probs=261.0

Q ss_pred             EEEEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEe
Q psy17610         73 TALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWS  152 (515)
Q Consensus        73 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~  152 (515)
                      ....+.+|.+.|++++|+|++++||+|+.||+|++||..++.... .+..|...|.+++|+|++..+++++.|+.+++|+
T Consensus        56 ~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~-~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~  134 (354)
T 2pbi_B           56 TRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEH-AVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYP  134 (354)
T ss_dssp             EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE-EEECSSSCCCEEEECTTSSEEEEESTTSEEEEEE
T ss_pred             EEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcce-EEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEE
Confidence            345678999999999999999999999999999999998865444 4556889999999999999999999999999999


Q ss_pred             CCCC------ceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcC--CCCEE
Q psy17610        153 VRTL------NELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQ--DGTRL  224 (515)
Q Consensus       153 ~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l  224 (515)
                      +...      .....+..|...|.+++|+|++..|++++.|+.|++||+++++.+..+ .+|...|.+++|+|  ++++|
T Consensus       135 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~-~~h~~~v~~~~~~~~~~g~~l  213 (354)
T 2pbi_B          135 LTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSF-HGHGADVLCLDLAPSETGNTF  213 (354)
T ss_dssp             CCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEE-ECCSSCEEEEEECCCSSCCEE
T ss_pred             EeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEE-cCCCCCeEEEEEEeCCCCCEE
Confidence            8643      346678889999999999999999999999999999999999998888 68999999999988  57899


Q ss_pred             EEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCc---cEEEEE
Q psy17610        225 LSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPS---MIMSAA  301 (515)
Q Consensus       225 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---~~~~~~  301 (515)
                      ++|+.||.|++||++  .......+.+|...|.+++|+|++.++++++.|++|++||++..+....+....   .+.+++
T Consensus       214 ~sgs~Dg~v~~wd~~--~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~  291 (354)
T 2pbi_B          214 VSGGCDKKAMVWDMR--SGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVD  291 (354)
T ss_dssp             EEEETTSCEEEEETT--TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEE
T ss_pred             EEEeCCCeEEEEECC--CCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEE
Confidence            999999999999995  445677788999999999999999999999999999999999988777665443   688999


Q ss_pred             EcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEE
Q psy17610        302 YHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWM  365 (515)
Q Consensus       302 ~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d  365 (515)
                      |+|++.++++++.|+.|++||+.+++.+..+..|. ..|.+++|+|+|++|++|+.||.|++|+
T Consensus       292 ~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~-~~v~~l~~spdg~~l~sgs~D~~v~vW~  354 (354)
T 2pbi_B          292 FSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHE-NRVSTLRVSPDGTAFCSGSWDHTLRVWA  354 (354)
T ss_dssp             ECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCS-SCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred             EeCCCCEEEEEECCCcEEEEECCCCceEEEEECCC-CcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence            99999999999999999999999999998888776 8999999999999999999999999995

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=100.00  E-value=6.1e-46  Score=335.91  Aligned_cols=291  Identities=16%  Similarity=0.267  Sum_probs=258.6

Q ss_pred             EEEEecCCCcEEEEEEecCC-CEEEEEecCceEEEEECCCCc----eeEEeeccCccCeEEEEeCCCCcEEEEEecCCcE
Q psy17610         74 ALYLLKDDSGISSLQYNPVN-NKVFVGTVNCEIFLIDMNSGF----TLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDI  148 (515)
Q Consensus        74 ~~~~~~~~~~v~~~~~s~~~-~~l~~~~~d~~i~iw~~~~~~----~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i  148 (515)
                      ...+.+|.+.|++++|+|++ ++|++|+.|++|++|++.+..    .....+.+|...|.+++|+|+++++++++.|++|
T Consensus        10 ~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v   89 (319)
T 3frx_A           10 RGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTL   89 (319)
T ss_dssp             EEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred             EEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEE
Confidence            34567899999999999965 899999999999999986421    2344677899999999999999999999999999


Q ss_pred             EEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCC------CC
Q psy17610        149 RIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQD------GT  222 (515)
Q Consensus       149 ~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------~~  222 (515)
                      ++||+++++.+..+.+|...|.+++|+|++++|++++.|+.|++||++. +....+ .+|...|.++.|.|.      +.
T Consensus        90 ~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~-~~~~~~-~~h~~~v~~~~~~~~~~~~~~~~  167 (319)
T 3frx_A           90 RLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG-QCLATL-LGHNDWVSQVRVVPNEKADDDSV  167 (319)
T ss_dssp             EEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS-CEEEEE-CCCSSCEEEEEECCC------CC
T ss_pred             EEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CeEEEE-eccCCcEEEEEEccCCCCCCCcc
Confidence            9999999999999999999999999999999999999999999999974 455555 689999999999985      44


Q ss_pred             EEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEE
Q psy17610        223 RLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAY  302 (515)
Q Consensus       223 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~  302 (515)
                      .+++++.|+.|++||++  .......+.+|...|.+++|+|++++|++++.||+|++||+.+++.+..+..+..+.+++|
T Consensus       168 ~l~s~~~d~~i~~wd~~--~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~  245 (319)
T 3frx_A          168 TIISAGNDKMVKAWNLN--QFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAF  245 (319)
T ss_dssp             EEEEEETTSCEEEEETT--TTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCSCEEEEEE
T ss_pred             EEEEEeCCCEEEEEECC--cchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCcEEEEEE
Confidence            89999999999999995  4556667889999999999999999999999999999999999999999998899999999


Q ss_pred             cCCCcEEEEEECCCeEEEEeCCCCceEEEEecC-------CCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCC
Q psy17610        303 HPSEVQLITCSTNKMIDYWETCDGSIIRSLEGS-------DVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREG  369 (515)
Q Consensus       303 ~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~-------~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~  369 (515)
                      +|++.+++++..+ .+++|++..+..+..+..+       +...+.+++|+|+|++|++|+.||.|++||+.++
T Consensus       246 sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~  318 (319)
T 3frx_A          246 SPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA  318 (319)
T ss_dssp             CSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred             cCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence            9999999888765 5999999988877776532       2356889999999999999999999999998764

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=9e-46  Score=332.57  Aligned_cols=290  Identities=14%  Similarity=0.194  Sum_probs=255.0

Q ss_pred             EEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCC
Q psy17610         75 LYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVR  154 (515)
Q Consensus        75 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~  154 (515)
                      ..+.+|.+.|++++|+|++++|++|+.||.|++||++++.. ...+..|..+|.+++|+|++++|++++.|++|++||+.
T Consensus         7 ~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~   85 (304)
T 2ynn_A            7 KTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVE-VRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYN   85 (304)
T ss_dssp             EEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEE-EEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETT
T ss_pred             EeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCce-eEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECC
Confidence            34668999999999999999999999999999999999644 44566799999999999999999999999999999999


Q ss_pred             CCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcC-CCCEEEEecCCCcE
Q psy17610        155 TLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQ-DGTRLLSGGGEGQV  233 (515)
Q Consensus       155 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i  233 (515)
                      +++.+..+.+|...|.+++|+|++++|++++.|+.|++||++++........+|...|.+++|+| ++..|++|+.|+.|
T Consensus        86 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v  165 (304)
T 2ynn_A           86 TGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTV  165 (304)
T ss_dssp             TCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEE
T ss_pred             CCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeE
Confidence            99999999999999999999999999999999999999999988555444479999999999999 67899999999999


Q ss_pred             EEEEccCCceeeEEeeccccCceEEEEEec--CCCEEEEEeCCCcEEEEEcccceEEEEEEcC-ccEEEEEEcCCCcEEE
Q psy17610        234 RIWKLTRESQSLQCVLKEHTSSVSVIQIKS--DSKEAMSASTDGTCVLWDLIKSTRLIIMILP-SMIMSAAYHPSEVQLI  310 (515)
Q Consensus       234 ~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~  310 (515)
                      ++||+...... .....+|...+..+.|.|  ++.++++++.|++|++||+++++.+..+..+ ..+..++|+|++.+|+
T Consensus       166 ~iwd~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~  244 (304)
T 2ynn_A          166 KVWSLGQSTPN-FTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIII  244 (304)
T ss_dssp             EEEETTCSSCS-EEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEE
T ss_pred             EEEECCCCCcc-ceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEE
Confidence            99999644322 223346678899999986  6789999999999999999999988888754 5899999999999999


Q ss_pred             EEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCC--EEEEEcCCCeEEEEEccC
Q psy17610        311 TCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGK--YFLTGGADQIVKMWMYRE  368 (515)
Q Consensus       311 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~l~~~~~dg~i~i~d~~~  368 (515)
                      +++.|+.|++||+.+++.+..+..+. ..+.+++++|++.  ++++|+.| .+.+|++.+
T Consensus       245 s~s~Dg~i~iWd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~asg~~~-g~~~~~~~~  302 (304)
T 2ynn_A          245 SGSEDGTLKIWNSSTYKVEKTLNVGL-ERSWCIATHPTGRKNYIASGFDN-GFTVLSLGN  302 (304)
T ss_dssp             EEETTSCEEEEETTTCCEEEEECCSS-SSEEEEEECTTCGGGCEEEEETT-EEEEEECC-
T ss_pred             EEcCCCeEEEEECCCCceeeeccCCC-ccEEEEEECCCCCceEEEEecCC-ceEEEEecc
Confidence            99999999999999999999998776 7899999999875  57777755 467777654

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=100.00  E-value=5.4e-46  Score=340.21  Aligned_cols=300  Identities=13%  Similarity=0.155  Sum_probs=250.2

Q ss_pred             EEEecCCC-cEEEEEEecCCCEEEEEecCceEEEEECCCCcee--EEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEE
Q psy17610         75 LYLLKDDS-GISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTL--TLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIW  151 (515)
Q Consensus        75 ~~~~~~~~-~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~--~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw  151 (515)
                      ..+.+|.. .|.+++|+|+|++||+|+.|+.|++||++++...  .....+|...|.+++|+|++++|++++.|+++++|
T Consensus         9 ~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw   88 (345)
T 3fm0_A            9 GRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIW   88 (345)
T ss_dssp             EEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred             eeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEE
Confidence            34567887 9999999999999999999999999999886433  23446899999999999999999999999999999


Q ss_pred             eCCCCc--eeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCce---EEEecCCCCCCeEEEEEcCCCCEEEE
Q psy17610        152 SVRTLN--ELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKL---KFIIPNAHNRGVTALAITQDGTRLLS  226 (515)
Q Consensus       152 ~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~  226 (515)
                      ++.++.  .+..+.+|...|.+++|+|++++|++++.|+.|++||+.++..   ...+ ..|...|.+++|+|++++|++
T Consensus        89 ~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~l~s  167 (345)
T 3fm0_A           89 KKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVL-NSHTQDVKHVVWHPSQELLAS  167 (345)
T ss_dssp             EECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEE-CCCCSCEEEEEECSSSSCEEE
T ss_pred             EccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEe-cCcCCCeEEEEECCCCCEEEE
Confidence            998764  5677889999999999999999999999999999999987643   3344 689999999999999999999


Q ss_pred             ecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccc---------------eEEEEE
Q psy17610        227 GGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKS---------------TRLIIM  291 (515)
Q Consensus       227 ~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~---------------~~~~~~  291 (515)
                      ++.|+.|++||...........+.+|...|.+++|+|++++|++++.|++|++||....               +++..+
T Consensus       168 ~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (345)
T 3fm0_A          168 ASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTL  247 (345)
T ss_dssp             EETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEE
T ss_pred             EeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEe
Confidence            99999999999976555666788999999999999999999999999999999996321               222233


Q ss_pred             E--cCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCc----e----EEEEecCCCccEEEEEEcCCC-CEEEEEcCCCe
Q psy17610        292 I--LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGS----I----IRSLEGSDVAAVNCVDFVDDG-KYFLTGGADQI  360 (515)
Q Consensus       292 ~--~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~----~----~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~  360 (515)
                      .  +...+.+++|+|++..+++++.|+.|++|+.....    +    .......+...|++++|+|++ .+|++++.||.
T Consensus       248 ~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~  327 (345)
T 3fm0_A          248 SGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGE  327 (345)
T ss_dssp             CSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSC
T ss_pred             cCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCc
Confidence            2  34579999999999999999999999999986542    1    122223345899999999987 59999999999


Q ss_pred             EEEEEccCCeeeeec
Q psy17610        361 VKMWMYREGVPCFVG  375 (515)
Q Consensus       361 i~i~d~~~~~~~~~~  375 (515)
                      |++|++.+++.....
T Consensus       328 v~~W~~~~~~~~~~~  342 (345)
T 3fm0_A          328 VAFWKYQRPEGLHHH  342 (345)
T ss_dssp             EEEEEECC-------
T ss_pred             EEEEEecCCCCcccc
Confidence            999999887765443

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=100.00  E-value=2.8e-46  Score=342.47  Aligned_cols=321  Identities=18%  Similarity=0.252  Sum_probs=283.9

Q ss_pred             CCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCce-
Q psy17610         80 DDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNE-  158 (515)
Q Consensus        80 ~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~-  158 (515)
                      |.++|.+++|+|+|++++++..++.+..|........... .+|..+|.+++|+|+++++++++ |+.|++||+.+++. 
T Consensus         8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~   85 (337)
T 1gxr_A            8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINT-LNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNK   85 (337)
T ss_dssp             EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEE-ECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCC
T ss_pred             cCCceeEEEECCCCCEEEeecCCCcEeccccCCcccccee-ccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCce
Confidence            5678999999999999999988887777776653333333 46999999999999999999988 99999999987653 


Q ss_pred             --eEEEE--ecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCc--eEEEecCCCCCCeEEEEEcCCCCEEEEecCCCc
Q psy17610        159 --LLRIS--VMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGK--LKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQ  232 (515)
Q Consensus       159 --~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~  232 (515)
                        +..+.  .|...+.+++|+|++++|++++.|+.|++||+.+++  ....+ ..|...|.+++|+|+++++++++.|+.
T Consensus        86 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~dg~  164 (337)
T 1gxr_A           86 SPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAEL-TSSAPACYALAISPDSKVCFSCCSDGN  164 (337)
T ss_dssp             SCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEE-ECSSSCEEEEEECTTSSEEEEEETTSC
T ss_pred             eeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeec-ccCCCceEEEEECCCCCEEEEEeCCCc
Confidence              34444  688899999999999999999999999999999887  44444 578999999999999999999999999


Q ss_pred             EEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEE
Q psy17610        233 VRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITC  312 (515)
Q Consensus       233 i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  312 (515)
                      |++||++  .......+..|...+.+++|+|+++++++++.|+.|++||+++++....+.....+.+++|+|+++.++++
T Consensus       165 v~~~d~~--~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~  242 (337)
T 1gxr_A          165 IAVWDLH--NQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVG  242 (337)
T ss_dssp             EEEEETT--TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEE
T ss_pred             EEEEeCC--CCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEE
Confidence            9999995  44566778889999999999999999999999999999999999999999989999999999999999999


Q ss_pred             ECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCc
Q psy17610        313 STNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKK  392 (515)
Q Consensus       313 ~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~  392 (515)
                      +.++.+++||+.+++.. .+..+. ..+.+++|+|++++|++++.||.|++||+++++.+.. ..|...+.+++|+|+++
T Consensus       243 ~~~~~i~~~~~~~~~~~-~~~~~~-~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~  319 (337)
T 1gxr_A          243 MESSNVEVLHVNKPDKY-QLHLHE-SCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQ-SKESSSVLSCDISVDDK  319 (337)
T ss_dssp             ETTSCEEEEETTSSCEE-EECCCS-SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE-EECSSCEEEEEECTTSC
T ss_pred             cCCCcEEEEECCCCCeE-EEcCCc-cceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEE-ecCCCcEEEEEECCCCC
Confidence            99999999999988764 444444 8899999999999999999999999999999887754 46889999999999999


Q ss_pred             EEEEEeCCCcEEEEeC
Q psy17610        393 VIVSVSADGGIFLWTF  408 (515)
Q Consensus       393 ~l~~~~~dg~i~iw~~  408 (515)
                      +|++++.||.|++|++
T Consensus       320 ~l~~~~~dg~i~iw~~  335 (337)
T 1gxr_A          320 YIVTGSGDKKATVYEV  335 (337)
T ss_dssp             EEEEEETTSCEEEEEE
T ss_pred             EEEEecCCCeEEEEEE
Confidence            9999999999999986

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=100.00  E-value=7.8e-46  Score=340.01  Aligned_cols=289  Identities=17%  Similarity=0.287  Sum_probs=261.9

Q ss_pred             eEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEec
Q psy17610        116 LTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTP  195 (515)
Q Consensus       116 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~  195 (515)
                      ....+.+|.++|.+++|+|++++|++++.|++|++||..+++....+..+...|.+++|+|++.++++++.|+.+++|++
T Consensus        56 ~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~  135 (354)
T 2pbi_B           56 TRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPL  135 (354)
T ss_dssp             EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEEC
T ss_pred             EEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEE
Confidence            44567889999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             CCC------ceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEec--CCCE
Q psy17610        196 QSG------KLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKS--DSKE  267 (515)
Q Consensus       196 ~~~------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~  267 (515)
                      ...      .....+ ..|...|.+++|+|++..|++++.|+.|++||+.  .......+.+|...|.+++++|  ++++
T Consensus       136 ~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~--~~~~~~~~~~h~~~v~~~~~~~~~~g~~  212 (354)
T 2pbi_B          136 TFDKNENMAAKKKSV-AMHTNYLSACSFTNSDMQILTASGDGTCALWDVE--SGQLLQSFHGHGADVLCLDLAPSETGNT  212 (354)
T ss_dssp             CCCTTCCSGGGCEEE-EECSSCEEEEEECSSSSEEEEEETTSEEEEEETT--TCCEEEEEECCSSCEEEEEECCCSSCCE
T ss_pred             eccccccccccceee-eccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCC--CCeEEEEEcCCCCCeEEEEEEeCCCCCE
Confidence            643      223334 4799999999999999999999999999999995  4566778899999999999987  4689


Q ss_pred             EEEEeCCCcEEEEEcccceEEEEEEc-CccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCC-CccEEEEEE
Q psy17610        268 AMSASTDGTCVLWDLIKSTRLIIMIL-PSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSD-VAAVNCVDF  345 (515)
Q Consensus       268 l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~i~~~~~  345 (515)
                      |++++.||+|++||+++++.+..+.. ...+.+++|+|++.++++++.|+.|++||++.++.+..+..+. ...+.+++|
T Consensus       213 l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~  292 (354)
T 2pbi_B          213 FVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDF  292 (354)
T ss_dssp             EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEE
T ss_pred             EEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEE
Confidence            99999999999999999998887764 4589999999999999999999999999999988877765432 247889999


Q ss_pred             cCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEe
Q psy17610        346 VDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWT  407 (515)
Q Consensus       346 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~  407 (515)
                      +|++++|++|+.|+.|++||+.+++.+..+.+|...|++++|+|++++|++++.|+.|++|+
T Consensus       293 s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~  354 (354)
T 2pbi_B          293 SLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA  354 (354)
T ss_dssp             CTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred             eCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence            99999999999999999999999999999999999999999999999999999999999995

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=100.00  E-value=1.4e-44  Score=326.88  Aligned_cols=293  Identities=20%  Similarity=0.350  Sum_probs=265.7

Q ss_pred             ceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEE
Q psy17610        114 FTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCF  193 (515)
Q Consensus       114 ~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~  193 (515)
                      ..+...+.+|.++|.+++|+|++++|++++.|+.|++|++.+++....+.+|...|.+++|+|++++|++++.|+.|++|
T Consensus        13 ~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vw   92 (312)
T 4ery_A           13 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIW   92 (312)
T ss_dssp             CEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred             ceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEE
Confidence            46677788999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeC
Q psy17610        194 TPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST  273 (515)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  273 (515)
                      |+++++.+..+ .+|...|.+++|+|++++|++++.|+.|++||++  .......+..|..+|.+++|+|+++++++++.
T Consensus        93 d~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  169 (312)
T 4ery_A           93 DVSSGKCLKTL-KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK--TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY  169 (312)
T ss_dssp             ETTTCCEEEEE-ECCSSCEEEEEECSSSSEEEEEETTSCEEEEETT--TCCEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred             ECCCCcEEEEE-cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC--CCEEEEEecCCCCcEEEEEEcCCCCEEEEEeC
Confidence            99999998888 6899999999999999999999999999999995  44566778889999999999999999999999


Q ss_pred             CCcEEEEEcccceEEEEEEc--CccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCc--cEEEEEEcCCC
Q psy17610        274 DGTCVLWDLIKSTRLIIMIL--PSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVA--AVNCVDFVDDG  349 (515)
Q Consensus       274 d~~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~--~i~~~~~~~~~  349 (515)
                      |+.|++||+++++....+..  ...+..++|+|+++++++++.|+.|++||+++++.+..+..+...  .+......+++
T Consensus       170 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (312)
T 4ery_A          170 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGG  249 (312)
T ss_dssp             TSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSS
T ss_pred             CCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCC
Confidence            99999999999888777643  347899999999999999999999999999999999888876522  12233344688


Q ss_pred             CEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEe--CCCcEEEEeCC
Q psy17610        350 KYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVS--ADGGIFLWTFP  409 (515)
Q Consensus       350 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~dg~i~iw~~~  409 (515)
                      .+|++|+.||.|++||+.+++.+..+.+|...|.+++|+|++++|++++  .|+.|++|+..
T Consensus       250 ~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d  311 (312)
T 4ery_A          250 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD  311 (312)
T ss_dssp             CEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred             cEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence            9999999999999999999999999999999999999999999999987  69999999864

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=100.00  E-value=7.3e-45  Score=328.85  Aligned_cols=289  Identities=16%  Similarity=0.196  Sum_probs=256.2

Q ss_pred             eeEEeeccCccCeEEEEeCCCC-cEEEEEecCCcEEEEeCCC-----CceeEEEEecCeEEEEEEEeeCCCEEEEEeCCC
Q psy17610        115 TLTLVNTCHTSAIYDLQFPVNF-SSVFATCSKNDIRIWSVRT-----LNELLRISVMNMICACIVFTYDGKAILSGWNDG  188 (515)
Q Consensus       115 ~~~~~~~~h~~~v~~~~~~~~~-~~l~~~~~d~~i~iw~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg  188 (515)
                      .+...+.+|.++|.+++|+|++ ++|++++.|++|++|++..     +.++..+.+|...|.+++|+|++++|++++.|+
T Consensus         8 ~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~   87 (319)
T 3frx_A            8 VLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDK   87 (319)
T ss_dssp             EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred             EEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCC
Confidence            3445678999999999999965 7899999999999999864     335678889999999999999999999999999


Q ss_pred             eEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecC----
Q psy17610        189 FIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSD----  264 (515)
Q Consensus       189 ~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~----  264 (515)
                      .|++||+++++....+ .+|...|.+++|+|++.+|++|+.|+.|++||++   ......+.+|...|.++.+.|.    
T Consensus        88 ~v~~wd~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~---~~~~~~~~~h~~~v~~~~~~~~~~~~  163 (319)
T 3frx_A           88 TLRLWDVATGETYQRF-VGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK---GQCLATLLGHNDWVSQVRVVPNEKAD  163 (319)
T ss_dssp             EEEEEETTTTEEEEEE-ECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT---SCEEEEECCCSSCEEEEEECCC----
T ss_pred             EEEEEECCCCCeeEEE-ccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC---CCeEEEEeccCCcEEEEEEccCCCCC
Confidence            9999999999998888 6899999999999999999999999999999985   3456677899999999999985    


Q ss_pred             --CCEEEEEeCCCcEEEEEcccceEEEEEE-cCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEE
Q psy17610        265 --SKEAMSASTDGTCVLWDLIKSTRLIIMI-LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVN  341 (515)
Q Consensus       265 --~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~  341 (515)
                        +..+++++.|+.|++||+++.+....+. +...+.+++|+|++++|++++.|+.|++||+.+++.+..+..+  ..+.
T Consensus       164 ~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~v~  241 (319)
T 3frx_A          164 DDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ--DEVF  241 (319)
T ss_dssp             --CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECC--SCEE
T ss_pred             CCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC--CcEE
Confidence              4489999999999999999988777665 4568999999999999999999999999999999999988865  6899


Q ss_pred             EEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeecc--------CCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCC
Q psy17610        342 CVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGI--------GHAASITKIKISPDKKVIVSVSADGGIFLWTFPE  410 (515)
Q Consensus       342 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--------~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~  410 (515)
                      +++|+|++.++++++.+ .+++|++..+..+..+.        .|...+.+++|+||+++|++++.||.|++||+.+
T Consensus       242 ~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t  317 (319)
T 3frx_A          242 SLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMT  317 (319)
T ss_dssp             EEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEE
T ss_pred             EEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEee
Confidence            99999999999988755 59999998876655543        3466799999999999999999999999999754

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=100.00  E-value=2.5e-46  Score=343.51  Aligned_cols=310  Identities=14%  Similarity=0.152  Sum_probs=239.0

Q ss_pred             cccccccccccccccCcceeeeccceEEEEEecCCCcEEEEEEecCCCEEEEEec------CceEEEEECCCCcee---E
Q psy17610         47 KLIKKKVSTKLKDVNAEDVSLYSAGVTALYLLKDDSGISSLQYNPVNNKVFVGTV------NCEIFLIDMNSGFTL---T  117 (515)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~------d~~i~iw~~~~~~~~---~  117 (515)
                      .+.......+...|+.+.          .....|...|++++|||||++||+|+.      |+.|++|+..++...   .
T Consensus        18 ~~~~~~g~~~~~~w~~p~----------~~p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~   87 (357)
T 4g56_B           18 LYFQSNGSSKGSAWGRPV----------TAPACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLC   87 (357)
T ss_dssp             --------------------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGC
T ss_pred             eEEecCCCccccccCCCC----------CCcccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEe
Confidence            333444445556676532          223469999999999999999999997      788999998775432   2


Q ss_pred             EeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeE----EEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEE
Q psy17610        118 LVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELL----RISVMNMICACIVFTYDGKAILSGWNDGFIRCF  193 (515)
Q Consensus       118 ~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~  193 (515)
                      ....+|...|.+++|+|++ .+++++.|++|+|||+.+++...    ...+|...|.+++|+|++++|++++.|+.|++|
T Consensus        88 ~~~~~~~~~V~~~~~s~d~-~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iw  166 (357)
T 4g56_B           88 TAGVQTEAGVTDVAWVSEK-GILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVW  166 (357)
T ss_dssp             SEEEECSSCEEEEEEETTT-EEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEE
T ss_pred             cccCCCCCCEEEEEEcCCC-CEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEE
Confidence            2334588999999999997 56778889999999999876542    344788999999999999999999999999999


Q ss_pred             ecCCCceEEEecCCCCCCeEEEEEcCCCC-EEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCC-CEEEEE
Q psy17610        194 TPQSGKLKFIIPNAHNRGVTALAITQDGT-RLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDS-KEAMSA  271 (515)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~  271 (515)
                      |+++++.+..+ ..|...|.+++|+|++. ++++++.|+.|++||++............|...+.+++|+|++ .+++++
T Consensus       167 d~~~~~~~~~~-~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g  245 (357)
T 4g56_B          167 DLSQKAVLKSY-NAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACG  245 (357)
T ss_dssp             ETTTTEEEEEE-CCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEE
T ss_pred             ECCCCcEEEEE-cCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEe
Confidence            99999999888 68999999999999874 7889999999999999765544444556678889999999974 678899


Q ss_pred             eCCCcEEEEEcccceEEEEEEcC-ccEEEEEEcCCC-cEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcC-C
Q psy17610        272 STDGTCVLWDLIKSTRLIIMILP-SMIMSAAYHPSE-VQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVD-D  348 (515)
Q Consensus       272 ~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~-~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~-~  348 (515)
                      +.|+.|++||+++++....+..+ ..+.+++|+|++ ++|++++.|+.|++||+++++.+..+ .| ...|++++|+| +
T Consensus       246 ~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H-~~~V~~vafsP~d  323 (357)
T 4g56_B          246 DETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SH-RDFVTGVAWSPLD  323 (357)
T ss_dssp             ESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CC-SSCEEEEEECSSS
T ss_pred             ecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CC-CCCEEEEEEeCCC
Confidence            99999999999998887777644 579999999987 57889999999999999999877655 34 48999999998 8


Q ss_pred             CCEEEEEcCCCeEEEEEccCCe
Q psy17610        349 GKYFLTGGADQIVKMWMYREGV  370 (515)
Q Consensus       349 ~~~l~~~~~dg~i~i~d~~~~~  370 (515)
                      +++|++++.||.|++|++.+..
T Consensus       324 ~~~l~s~s~Dg~v~iW~~~~~~  345 (357)
T 4g56_B          324 HSKFTTVGWDHKVLHHHLPSEG  345 (357)
T ss_dssp             TTEEEEEETTSCEEEEECC---
T ss_pred             CCEEEEEcCCCeEEEEECCCCC
Confidence            9999999999999999997643

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=100.00  E-value=4.2e-45  Score=334.25  Aligned_cols=297  Identities=17%  Similarity=0.254  Sum_probs=251.3

Q ss_pred             eeEEeeccCcc-CeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEE---EecCeEEEEEEEeeCCCEEEEEeCCCeE
Q psy17610        115 TLTLVNTCHTS-AIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRI---SVMNMICACIVFTYDGKAILSGWNDGFI  190 (515)
Q Consensus       115 ~~~~~~~~h~~-~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~dg~i  190 (515)
                      .+...+.+|.. .|.+++|+|+|++|++++.|++|+|||+++++.....   .+|...|.+++|+|++++|++++.|+.+
T Consensus         6 ~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v   85 (345)
T 3fm0_A            6 VLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATT   85 (345)
T ss_dssp             EEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred             EEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcE
Confidence            44556778988 9999999999999999999999999999887644322   4688999999999999999999999999


Q ss_pred             EEEecCCCc--eEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCc-eeeEEeeccccCceEEEEEecCCCE
Q psy17610        191 RCFTPQSGK--LKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRES-QSLQCVLKEHTSSVSVIQIKSDSKE  267 (515)
Q Consensus       191 ~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~  267 (515)
                      ++|++.++.  ....+ .+|...|.+++|+|++++|++++.|+.|++||++... ......+.+|...|.+++|+|++++
T Consensus        86 ~iw~~~~~~~~~~~~~-~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~  164 (345)
T 3fm0_A           86 CIWKKNQDDFECVTTL-EGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQEL  164 (345)
T ss_dssp             EEEEECCC-EEEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSC
T ss_pred             EEEEccCCCeEEEEEc-cCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCE
Confidence            999998774  34555 7899999999999999999999999999999996543 3456678899999999999999999


Q ss_pred             EEEEeCCCcEEEEEcccceEE--EEEE-cCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCC---------------ceE
Q psy17610        268 AMSASTDGTCVLWDLIKSTRL--IIMI-LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDG---------------SII  329 (515)
Q Consensus       268 l~~~~~d~~i~iwd~~~~~~~--~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~---------------~~~  329 (515)
                      |++++.|++|++||.++++..  ..+. +...+.+++|+|++++|++++.|+.|++||....               +++
T Consensus       165 l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~  244 (345)
T 3fm0_A          165 LASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCI  244 (345)
T ss_dssp             EEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEE
T ss_pred             EEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCcccee
Confidence            999999999999999877543  3333 4468999999999999999999999999996321               234


Q ss_pred             EEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCe---------eeeeccCCCCCeeEEEECCCC-cEEEEEeC
Q psy17610        330 RSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGV---------PCFVGIGHAASITKIKISPDK-KVIVSVSA  399 (515)
Q Consensus       330 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~---------~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~  399 (515)
                      ..+...+...|.+++|+|++..|++++.|+.|++|+...+.         ......+|...|++++|+|++ .+|++++.
T Consensus       245 ~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~  324 (345)
T 3fm0_A          245 CTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSD  324 (345)
T ss_dssp             EEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEET
T ss_pred             EEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCC
Confidence            45555555889999999999999999999999999987542         122346899999999999987 59999999


Q ss_pred             CCcEEEEeCCCCc
Q psy17610        400 DGGIFLWTFPELE  412 (515)
Q Consensus       400 dg~i~iw~~~~~~  412 (515)
                      ||.|++|++...+
T Consensus       325 Dg~v~~W~~~~~~  337 (345)
T 3fm0_A          325 DGEVAFWKYQRPE  337 (345)
T ss_dssp             TSCEEEEEECC--
T ss_pred             CCcEEEEEecCCC
Confidence            9999999987754

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=100.00  E-value=3.2e-46  Score=346.46  Aligned_cols=296  Identities=18%  Similarity=0.283  Sum_probs=260.3

Q ss_pred             EEEEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEe
Q psy17610         73 TALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWS  152 (515)
Q Consensus        73 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~  152 (515)
                      ....+.+|.+.|++++|+|++++|++|+.|++|++||..++.. ...+.+|...|.+++|+|+++++++++.|+.+++||
T Consensus        58 ~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~-~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~  136 (380)
T 3iz6_a           58 CCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQK-THAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFN  136 (380)
T ss_dssp             EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEE-EEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEE
T ss_pred             EeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcc-ceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEE
Confidence            4456789999999999999999999999999999999998644 455677999999999999999999999999999999


Q ss_pred             CCCCc-------eeEEEEecCeEEEEEEEeeCC-CEEEEEeCCCeEEEEecCCCceEEEec----CCCCCCeEEEEEcC-
Q psy17610        153 VRTLN-------ELLRISVMNMICACIVFTYDG-KAILSGWNDGFIRCFTPQSGKLKFIIP----NAHNRGVTALAITQ-  219 (515)
Q Consensus       153 ~~~~~-------~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~~~~~~~~~~~~~~----~~~~~~v~~~~~~~-  219 (515)
                      +.+..       ....+.+|...+.++.|.|++ ..|++++.|+.|++||+.+++.+..+.    .+|...|.+++|++ 
T Consensus       137 ~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~  216 (380)
T 3iz6_a          137 LSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSL  216 (380)
T ss_dssp             CCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSS
T ss_pred             CCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecC
Confidence            87532       344567899999999999974 579999999999999999998877652    57899999999987 


Q ss_pred             CCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCc----
Q psy17610        220 DGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPS----  295 (515)
Q Consensus       220 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~----  295 (515)
                      ++++|++|+.|+.|++||++. .......+.+|...|.+++|+|++++|++++.|++|++||+++++.+..+....    
T Consensus       217 ~~~~l~sgs~D~~v~~wd~~~-~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~  295 (380)
T 3iz6_a          217 NANMFISGSCDTTVRLWDLRI-TSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRND  295 (380)
T ss_dssp             SCCEEEEEETTSCEEEEETTT-TCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSC
T ss_pred             CCCEEEEEECCCeEEEEECCC-CCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccc
Confidence            889999999999999999963 334566788999999999999999999999999999999999999888775432    


Q ss_pred             ----cEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEe---cCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccC
Q psy17610        296 ----MIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLE---GSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYRE  368 (515)
Q Consensus       296 ----~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~  368 (515)
                          .+.+++|+|+++++++++.+|.|++||...++.+..+.   ..+...|.+++|+|+|++|++|+.|+.|++|++..
T Consensus       296 ~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~  375 (380)
T 3iz6_a          296 NELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSG  375 (380)
T ss_dssp             CSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCS
T ss_pred             cccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCC
Confidence                37899999999999999999999999999999888773   23448899999999999999999999999999876


Q ss_pred             Ce
Q psy17610        369 GV  370 (515)
Q Consensus       369 ~~  370 (515)
                      .+
T Consensus       376 ~~  377 (380)
T 3iz6_a          376 HR  377 (380)
T ss_dssp             SS
T ss_pred             Cc
Confidence            53

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=100.00  E-value=3.9e-45  Score=334.92  Aligned_cols=323  Identities=14%  Similarity=0.197  Sum_probs=282.5

Q ss_pred             CccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEE
Q psy17610        123 HTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKF  202 (515)
Q Consensus       123 h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~  202 (515)
                      |.++|.+++|+|||+.++++..++.+.+|.............|...|.+++|+|+++++++++ ||.|++||+.+++...
T Consensus         8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~   86 (337)
T 1gxr_A            8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKS   86 (337)
T ss_dssp             EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCS
T ss_pred             cCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCcee
Confidence            667899999999999999888888777777766656666668999999999999999999998 9999999998765322


Q ss_pred             ---Ee-cCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEE
Q psy17610        203 ---II-PNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCV  278 (515)
Q Consensus       203 ---~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~  278 (515)
                         .+ ...|...|.+++|+|++++|++++.|+.|++||+..........+..|...+.+++|+|+++++++++.|+.|+
T Consensus        87 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~  166 (337)
T 1gxr_A           87 PVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIA  166 (337)
T ss_dssp             CSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred             eeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEE
Confidence               22 12788999999999999999999999999999997666556777888999999999999999999999999999


Q ss_pred             EEEcccceEEEEEEc-CccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcC
Q psy17610        279 LWDLIKSTRLIIMIL-PSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA  357 (515)
Q Consensus       279 iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~  357 (515)
                      +||+++++....+.. ...+.+++|+|+++++++++.++.|++||+++++.+..+...  ..+.+++|+|+++++++++.
T Consensus       167 ~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~~~~~  244 (337)
T 1gxr_A          167 VWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFT--SQIFSLGYCPTGEWLAVGME  244 (337)
T ss_dssp             EEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECS--SCEEEEEECTTSSEEEEEET
T ss_pred             EEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCC--CceEEEEECCCCCEEEEEcC
Confidence            999999988887764 568999999999999999999999999999999988887643  78999999999999999999


Q ss_pred             CCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceee
Q psy17610        358 DQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLII  437 (515)
Q Consensus       358 dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  437 (515)
                      ++.|++||+++++.. .+..|...|.+++|+|++++|++++.||.|++|++...+..                     ..
T Consensus       245 ~~~i~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~---------------------~~  302 (337)
T 1gxr_A          245 SSNVEVLHVNKPDKY-QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI---------------------FQ  302 (337)
T ss_dssp             TSCEEEEETTSSCEE-EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE---------------------EE
T ss_pred             CCcEEEEECCCCCeE-EEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEE---------------------EE
Confidence            999999999887654 56789999999999999999999999999999998765311                     12


Q ss_pred             ecCcccEEEeeeccCCcEEEEeecCCeEEEEec
Q psy17610        438 MILPSMIMSAAYHPSEVQLITCSTNKMIDYWET  470 (515)
Q Consensus       438 ~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~  470 (515)
                      ..+...+.+++|+|++++|++++.||.|++|++
T Consensus       303 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~  335 (337)
T 1gxr_A          303 SKESSSVLSCDISVDDKYIVTGSGDKKATVYEV  335 (337)
T ss_dssp             EECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred             ecCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence            235677999999999999999999999999996

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=100.00  E-value=5.7e-46  Score=341.09  Aligned_cols=315  Identities=14%  Similarity=0.156  Sum_probs=240.0

Q ss_pred             EEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec------CCcEEEEeCCCCce-
Q psy17610         86 SLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS------KNDIRIWSVRTLNE-  158 (515)
Q Consensus        86 ~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~------d~~i~iw~~~~~~~-  158 (515)
                      .+.+.+++.++.. ..+.....|++....     ..+|...|.+++|+|||++|++++.      |+.+++|+..++.. 
T Consensus        10 g~d~g~~~~~~~~-~g~~~~~~w~~p~~~-----p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~   83 (357)
T 4g56_B           10 GVDLGTENLYFQS-NGSSKGSAWGRPVTA-----PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPN   83 (357)
T ss_dssp             ------------------------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---C
T ss_pred             CCCCCccceEEec-CCCccccccCCCCCC-----cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcc
Confidence            3455555555444 445678899986521     2459999999999999999999987      67899999877653 


Q ss_pred             ---eEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEE---ecCCCCCCeEEEEEcCCCCEEEEecCCCc
Q psy17610        159 ---LLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFI---IPNAHNRGVTALAITQDGTRLLSGGGEGQ  232 (515)
Q Consensus       159 ---~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~d~~  232 (515)
                         ......|...|.+++|+|++. +++++.||.|++||+.+++....   ...+|...|.+++|+|++++|++|+.|+.
T Consensus        84 ~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~  162 (357)
T 4g56_B           84 ESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFS  162 (357)
T ss_dssp             GGGCSEEEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSC
T ss_pred             eeEecccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCe
Confidence               344567888999999999985 56778899999999998765432   12479999999999999999999999999


Q ss_pred             EEEEEccCCceeeEEeeccccCceEEEEEecCCC-EEEEEeCCCcEEEEEcccceEEEEEE---cCccEEEEEEcCC-Cc
Q psy17610        233 VRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSK-EAMSASTDGTCVLWDLIKSTRLIIMI---LPSMIMSAAYHPS-EV  307 (515)
Q Consensus       233 i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~---~~~~~~~~~~~~~-~~  307 (515)
                      |++||++  +......+.+|...|.+++|++++. .+++++.|++|++||+++++....+.   ....+.+++|+|+ +.
T Consensus       163 v~iwd~~--~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~  240 (357)
T 4g56_B          163 VKVWDLS--QKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDD  240 (357)
T ss_dssp             EEEEETT--TTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTT
T ss_pred             EEEEECC--CCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccc
Confidence            9999995  4567778899999999999999875 78899999999999999887765543   2346899999997 46


Q ss_pred             EEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCC-CEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEE
Q psy17610        308 QLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDG-KYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIK  386 (515)
Q Consensus       308 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~  386 (515)
                      ++++++.++.|++||+++++.+..+..+. ..|++++|+|++ ++|++|+.|+.|+|||+++++.+..+ +|...|++++
T Consensus       241 ~la~g~~d~~i~~wd~~~~~~~~~~~~~~-~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~va  318 (357)
T 4g56_B          241 TFACGDETGNVSLVNIKNPDSAQTSAVHS-QNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVA  318 (357)
T ss_dssp             EEEEEESSSCEEEEESSCGGGCEEECCCS-SCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEE
T ss_pred             eEEEeecccceeEEECCCCcEeEEEeccc-eeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEE
Confidence            88899999999999999999999998876 899999999987 57999999999999999998877655 8999999999


Q ss_pred             ECC-CCcEEEEEeCCCcEEEEeCCCC
Q psy17610        387 ISP-DKKVIVSVSADGGIFLWTFPEL  411 (515)
Q Consensus       387 ~~~-~~~~l~~~~~dg~i~iw~~~~~  411 (515)
                      |+| ++++|++++.||+|++|++...
T Consensus       319 fsP~d~~~l~s~s~Dg~v~iW~~~~~  344 (357)
T 4g56_B          319 WSPLDHSKFTTVGWDHKVLHHHLPSE  344 (357)
T ss_dssp             ECSSSTTEEEEEETTSCEEEEECC--
T ss_pred             EeCCCCCEEEEEcCCCeEEEEECCCC
Confidence            998 8999999999999999999764

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=100.00  E-value=2e-45  Score=334.39  Aligned_cols=296  Identities=14%  Similarity=0.166  Sum_probs=240.1

Q ss_pred             EEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCC-----------CceeEEEEecCeEEEEEE
Q psy17610        105 IFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRT-----------LNELLRISVMNMICACIV  173 (515)
Q Consensus       105 i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~-----------~~~~~~~~~~~~~v~~~~  173 (515)
                      .+.|++....     ...|...|.+++|+|||+.|++++ |+++++||...           .........+...|.+++
T Consensus        16 ~r~w~~~~~~-----~~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~   89 (344)
T 4gqb_B           16 AREWNLPPNA-----PACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLT   89 (344)
T ss_dssp             -------CCS-----CSSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEE
T ss_pred             ccccCCCCCC-----cccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEE
Confidence            3567765522     124777899999999998777665 77888887321           112223334667899999


Q ss_pred             EeeCCCEEEEEeCCCeEEEEecCCCceEEEe---cCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeec
Q psy17610        174 FTYDGKAILSGWNDGFIRCFTPQSGKLKFII---PNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLK  250 (515)
Q Consensus       174 ~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~  250 (515)
                      |+|++ .|++++.||.|++||+++++.....   ..+|...|++++|+|++++|++|+.|+.|++||+.  +......+.
T Consensus        90 ~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~--~~~~~~~~~  166 (344)
T 4gqb_B           90 WVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLA--QQVVLSSYR  166 (344)
T ss_dssp             EETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT--TTEEEEEEC
T ss_pred             EeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECC--CCcEEEEEc
Confidence            99985 6889999999999999988754332   25899999999999999999999999999999994  556778899


Q ss_pred             cccCceEEEEEecCCC-EEEEEeCCCcEEEEEcccceEEEEEEc---CccEEEEEEcCC-CcEEEEEECCCeEEEEeCCC
Q psy17610        251 EHTSSVSVIQIKSDSK-EAMSASTDGTCVLWDLIKSTRLIIMIL---PSMIMSAAYHPS-EVQLITCSTNKMIDYWETCD  325 (515)
Q Consensus       251 ~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~-~~~l~~~~~~~~i~~~d~~~  325 (515)
                      +|...|.+++|++++. .+++++.|++|++||+++++....+..   ...+.+++|+|+ ++++++++.|+.|++||+++
T Consensus       167 ~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~  246 (344)
T 4gqb_B          167 AHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKS  246 (344)
T ss_dssp             CCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC
T ss_pred             CcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCC
Confidence            9999999999999885 688999999999999999887776543   346899999995 56888999999999999999


Q ss_pred             CceEEEEecCCCccEEEEEEcCCC-CEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCc-EEEEEeCCCcE
Q psy17610        326 GSIIRSLEGSDVAAVNCVDFVDDG-KYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKK-VIVSVSADGGI  403 (515)
Q Consensus       326 ~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i  403 (515)
                      ++++..+..|. ..|++++|+|++ ++|++|+.|++|++||+++++.. .+.+|...|++++|+|+++ +|++++.|++|
T Consensus       247 ~~~~~~~~~h~-~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v  324 (344)
T 4gqb_B          247 TSCVLSSAVHS-QCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQV  324 (344)
T ss_dssp             --CCEEEECCS-SCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCE
T ss_pred             CcEEEEEcCCC-CCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeE
Confidence            99999999877 899999999997 57999999999999999988755 5679999999999999886 67799999999


Q ss_pred             EEEeCCCC
Q psy17610        404 FLWTFPEL  411 (515)
Q Consensus       404 ~iw~~~~~  411 (515)
                      ++|++...
T Consensus       325 ~~w~v~~~  332 (344)
T 4gqb_B          325 VHHVVPTE  332 (344)
T ss_dssp             EEEECCC-
T ss_pred             EEEECCCC
Confidence            99999764

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=100.00  E-value=1e-44  Score=338.06  Aligned_cols=301  Identities=19%  Similarity=0.307  Sum_probs=252.0

Q ss_pred             EEEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCc------------------cCeEEEEeCCC
Q psy17610         74 ALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHT------------------SAIYDLQFPVN  135 (515)
Q Consensus        74 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~------------------~~v~~~~~~~~  135 (515)
                      .....+|.+.|.+++|+|+|++||+|+ ++.+++|++.++..+..+ ..|.                  ..|.+++|+|+
T Consensus        57 ~~~~~~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~d  134 (393)
T 1erj_A           57 LHKSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARL-SDDSAANKDPENLNTSSSPSSDLYIRSVCFSPD  134 (393)
T ss_dssp             EEEEEECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEE-CC-----------------CCCCBEEEEEECTT
T ss_pred             eEEecCCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEe-cCccccccccccccccccCCCceeEEEEEECCC
Confidence            345567999999999999999999987 679999999987655433 3232                  24999999999


Q ss_pred             CcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEE
Q psy17610        136 FSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTAL  215 (515)
Q Consensus       136 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~  215 (515)
                      +++|++++.|+.|++||+++++.+..+.+|...|.+++|+|++++|++++.|+.|++||+++++....+  .+...+.++
T Consensus       135 g~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~--~~~~~v~~~  212 (393)
T 1erj_A          135 GKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTL--SIEDGVTTV  212 (393)
T ss_dssp             SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE--ECSSCEEEE
T ss_pred             CCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEE--EcCCCcEEE
Confidence            999999999999999999999999999999999999999999999999999999999999999887776  466789999


Q ss_pred             EEcC-CCCEEEEecCCCcEEEEEccCCceeeEEee-------ccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceE
Q psy17610        216 AITQ-DGTRLLSGGGEGQVRIWKLTRESQSLQCVL-------KEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTR  287 (515)
Q Consensus       216 ~~~~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~  287 (515)
                      +|+| ++++|++|+.|+.|++||++...  ....+       .+|...|.+++|+|+++++++++.|++|++||+++...
T Consensus       213 ~~~~~~~~~l~~~s~d~~v~iwd~~~~~--~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~  290 (393)
T 1erj_A          213 AVSPGDGKYIAAGSLDRAVRVWDSETGF--LVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANN  290 (393)
T ss_dssp             EECSTTCCEEEEEETTSCEEEEETTTCC--EEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-----
T ss_pred             EEECCCCCEEEEEcCCCcEEEEECCCCc--EEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCC
Confidence            9999 89999999999999999996433  33333       57899999999999999999999999999999976543


Q ss_pred             EEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEcc
Q psy17610        288 LIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYR  367 (515)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~  367 (515)
                      ......                             ...+.+...+..+. ..+.+++|+|++++|++|+.|+.|++||..
T Consensus       291 ~~~~~~-----------------------------~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~  340 (393)
T 1erj_A          291 KSDSKT-----------------------------PNSGTCEVTYIGHK-DFVLSVATTQNDEYILSGSKDRGVLFWDKK  340 (393)
T ss_dssp             ---------------------------------------CEEEEEECCS-SCEEEEEECGGGCEEEEEETTSEEEEEETT
T ss_pred             cccccC-----------------------------CCCCcceEEEeccc-CcEEEEEECCCCCEEEEEeCCCeEEEEECC
Confidence            221100                             01223344555555 789999999999999999999999999999


Q ss_pred             CCeeeeeccCCCCCeeEEEECC------CCcEEEEEeCCCcEEEEeCCC
Q psy17610        368 EGVPCFVGIGHAASITKIKISP------DKKVIVSVSADGGIFLWTFPE  410 (515)
Q Consensus       368 ~~~~~~~~~~~~~~i~~~~~~~------~~~~l~~~~~dg~i~iw~~~~  410 (515)
                      +++++..+.+|...|.+++|++      ++++|++++.||.|++|++..
T Consensus       341 ~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~  389 (393)
T 1erj_A          341 SGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK  389 (393)
T ss_dssp             TCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred             CCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence            9999999999999999999986      688999999999999999754

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.3e-44  Score=327.27  Aligned_cols=290  Identities=18%  Similarity=0.250  Sum_probs=236.4

Q ss_pred             EEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCc-eeEEee-cc-CccCeEEEEeCCCCcEEEEEecCCcEEEE
Q psy17610         75 LYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGF-TLTLVN-TC-HTSAIYDLQFPVNFSSVFATCSKNDIRIW  151 (515)
Q Consensus        75 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~-~~~~~~-~~-h~~~v~~~~~~~~~~~l~~~~~d~~i~iw  151 (515)
                      ..+.+|.++|.+++|+|+  +||+|+.|+.|++||+.++. .....+ .+ |..+|.+++|+|++++|++++.|++|+||
T Consensus         8 ~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw   85 (330)
T 2hes_X            8 KSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIW   85 (330)
T ss_dssp             EEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred             eeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEE
Confidence            446689999999999987  99999999999999998752 333333 44 99999999999999999999999999999


Q ss_pred             eCCC-------CceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCC----ceEEEecCCCCCCeEEEEEcCC
Q psy17610        152 SVRT-------LNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSG----KLKFIIPNAHNRGVTALAITQD  220 (515)
Q Consensus       152 ~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~----~~~~~~~~~~~~~v~~~~~~~~  220 (515)
                      |++.       .+.+..+.+|...|.+++|+|++++|++++.|+.|++||+...    +.+..+ .+|...|.+++|+|+
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~-~~h~~~v~~v~~~p~  164 (330)
T 2hes_X           86 AKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVL-QEHSQDVKHVIWHPS  164 (330)
T ss_dssp             EC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEE-CCCSSCEEEEEECSS
T ss_pred             EcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEe-ccCCCceEEEEECCC
Confidence            9853       3456778899999999999999999999999999999999432    345555 689999999999999


Q ss_pred             CCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecC--CCEEEEEeCCCcEEEEEcccc--------eEEEE
Q psy17610        221 GTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSD--SKEAMSASTDGTCVLWDLIKS--------TRLII  290 (515)
Q Consensus       221 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~--------~~~~~  290 (515)
                      +++|++++.|+.|++||...........+.+|...|.+++|+|+  +..+++++.|++|++||++.+        .....
T Consensus       165 ~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~  244 (330)
T 2hes_X          165 EALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAI  244 (330)
T ss_dssp             SSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEE
T ss_pred             CCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeee
Confidence            99999999999999999875555677888999999999999998  678999999999999998764        23333


Q ss_pred             EE--cCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCc--eEEEEecCCCc-cEEEEEEcC--CCCEEEEEcCCCeEEE
Q psy17610        291 MI--LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGS--IIRSLEGSDVA-AVNCVDFVD--DGKYFLTGGADQIVKM  363 (515)
Q Consensus       291 ~~--~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~-~i~~~~~~~--~~~~l~~~~~dg~i~i  363 (515)
                      +.  +...+.+++|++++ .+++++.|+.|++||..+++  ........+.. .+.+++|+|  ++++|++|+.||.|++
T Consensus       245 ~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~  323 (330)
T 2hes_X          245 LPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNF  323 (330)
T ss_dssp             CCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEE
T ss_pred             cccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEE
Confidence            32  45689999999765 88999999999999998774  33333223334 899999999  7899999999999999


Q ss_pred             EEccC
Q psy17610        364 WMYRE  368 (515)
Q Consensus       364 ~d~~~  368 (515)
                      ||+++
T Consensus       324 W~~~~  328 (330)
T 2hes_X          324 WSLEK  328 (330)
T ss_dssp             EEC--
T ss_pred             EEecc
Confidence            99864

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=100.00  E-value=1.6e-44  Score=330.45  Aligned_cols=293  Identities=15%  Similarity=0.206  Sum_probs=249.7

Q ss_pred             EEEEecCCCcEEEEEE-----ec-CCCEEEEEecCceEEEEECCCCc------eeEEeeccCccCeEEEEeCCCCcEEEE
Q psy17610         74 ALYLLKDDSGISSLQY-----NP-VNNKVFVGTVNCEIFLIDMNSGF------TLTLVNTCHTSAIYDLQFPVNFSSVFA  141 (515)
Q Consensus        74 ~~~~~~~~~~v~~~~~-----s~-~~~~l~~~~~d~~i~iw~~~~~~------~~~~~~~~h~~~v~~~~~~~~~~~l~~  141 (515)
                      ...+.+|.+.|++++|     ++ ++++|++|+.|++|++||+.++.      .....+.+|...|.+++|+|++.++++
T Consensus        14 ~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s   93 (343)
T 2xzm_R           14 RGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAIS   93 (343)
T ss_dssp             EEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEE
T ss_pred             eeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEE
Confidence            3457789999999999     77 99999999999999999997532      334567889999999999999999999


Q ss_pred             EecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEe-cCCCCCCeEEEEEcCC
Q psy17610        142 TCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFII-PNAHNRGVTALAITQD  220 (515)
Q Consensus       142 ~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~  220 (515)
                      ++.|++|++||+++++.+..+.+|...|.+++|+|++++|++++.|+.|++||+......... ...|...|.+++|+|+
T Consensus        94 ~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~  173 (343)
T 2xzm_R           94 SSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPI  173 (343)
T ss_dssp             EETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCC
T ss_pred             EcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccc
Confidence            999999999999999999999999999999999999999999999999999999844332221 1368899999999998


Q ss_pred             C----------CEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcc-cceEEE
Q psy17610        221 G----------TRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLI-KSTRLI  289 (515)
Q Consensus       221 ~----------~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~-~~~~~~  289 (515)
                      +          .+|++++.|+.|++||..   ......+.+|...|.+++|+|++++|++++.|+.|++||+. ......
T Consensus       174 ~~~~~~~~~~~~~l~s~~~d~~i~iwd~~---~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~  250 (343)
T 2xzm_R          174 MKSANKVQPFAPYFASVGWDGRLKVWNTN---FQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQR  250 (343)
T ss_dssp             CCSCSCCCSSCCEEEEEETTSEEEEEETT---TEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSE
T ss_pred             cccccccCCCCCEEEEEcCCCEEEEEcCC---CceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccce
Confidence            6          789999999999999952   34556778999999999999999999999999999999994 444445


Q ss_pred             EEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEE--EEec----------CCCccEEEEEEcCCCCEEEEEcC
Q psy17610        290 IMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIR--SLEG----------SDVAAVNCVDFVDDGKYFLTGGA  357 (515)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~--~~~~----------~~~~~i~~~~~~~~~~~l~~~~~  357 (515)
                      .+.....+.+++|+|++.+++++ .++.+++||+.+++...  .+..          .+...+.+++|+|+|++|++|+.
T Consensus       251 ~~~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~  329 (343)
T 2xzm_R          251 EFDAGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFT  329 (343)
T ss_dssp             EEECSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEET
T ss_pred             eecCCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecC
Confidence            55566789999999999887655 57789999998876543  3331          23367999999999999999999


Q ss_pred             CCeEEEEEccCCe
Q psy17610        358 DQIVKMWMYREGV  370 (515)
Q Consensus       358 dg~i~i~d~~~~~  370 (515)
                      ||.|++|+++++.
T Consensus       330 Dg~v~~w~~~~g~  342 (343)
T 2xzm_R          330 DGVIRTFSFETSA  342 (343)
T ss_dssp             TSEEEEEEEEEEE
T ss_pred             CceEEEEEEEccC
Confidence            9999999987653

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=100.00  E-value=3.5e-46  Score=346.21  Aligned_cols=304  Identities=18%  Similarity=0.254  Sum_probs=262.5

Q ss_pred             EEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEE
Q psy17610        105 IFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSG  184 (515)
Q Consensus       105 i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  184 (515)
                      +..|+..+ ......+.+|.++|++++|+|++++|++++.|++|+|||+.+++....+..|...|.+++|+|++++|+++
T Consensus        48 ~~~~~~~~-~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~  126 (380)
T 3iz6_a           48 AVSFNPTD-LVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACG  126 (380)
T ss_dssp             CCCCCCCC-CEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEEC
T ss_pred             ccccccce-eEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEe
Confidence            44566555 35566788999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eCCCeEEEEecCCCce------EEEecCCCCCCeEEEEEcCC-CCEEEEecCCCcEEEEEccCCceeeEEee-----ccc
Q psy17610        185 WNDGFIRCFTPQSGKL------KFIIPNAHNRGVTALAITQD-GTRLLSGGGEGQVRIWKLTRESQSLQCVL-----KEH  252 (515)
Q Consensus       185 ~~dg~i~~~~~~~~~~------~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iw~~~~~~~~~~~~~-----~~~  252 (515)
                      +.|+.+++|++.+...      ......+|...+.++.|.|+ +..|++|+.|+.|++||+....  ....+     .+|
T Consensus       127 ~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~--~~~~~~~~~~~~h  204 (380)
T 3iz6_a          127 GLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQ--RISIFGSEFPSGH  204 (380)
T ss_dssp             CSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCC--EEEEECCCSSSSC
T ss_pred             eCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCc--EEEEeecccCCCC
Confidence            9999999999875321      11223689999999999996 4579999999999999996443  33333     578


Q ss_pred             cCceEEEEEec-CCCEEEEEeCCCcEEEEEccc-ceEEEEEE-cCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceE
Q psy17610        253 TSSVSVIQIKS-DSKEAMSASTDGTCVLWDLIK-STRLIIMI-LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSII  329 (515)
Q Consensus       253 ~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~  329 (515)
                      ...|.++++++ +++++++++.|++|++||++. .+....+. +...+.+++|+|+++++++++.|+.|++||+++++.+
T Consensus       205 ~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~  284 (380)
T 3iz6_a          205 TADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQL  284 (380)
T ss_dssp             CSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEE
T ss_pred             ccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEE
Confidence            99999999977 889999999999999999974 45555554 4568999999999999999999999999999999998


Q ss_pred             EEEecCCC------ccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeec----cCCCCCeeEEEECCCCcEEEEEeC
Q psy17610        330 RSLEGSDV------AAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVG----IGHAASITKIKISPDKKVIVSVSA  399 (515)
Q Consensus       330 ~~~~~~~~------~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~----~~~~~~i~~~~~~~~~~~l~~~~~  399 (515)
                      ..+..+..      ..+.+++|+|+|++|++|+.||.|++||..+++....+    .+|...|++++|+|++++|++++.
T Consensus       285 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~  364 (380)
T 3iz6_a          285 QVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSW  364 (380)
T ss_dssp             EEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECT
T ss_pred             EEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeC
Confidence            88765431      24889999999999999999999999999988877666    689999999999999999999999


Q ss_pred             CCcEEEEeCCCC
Q psy17610        400 DGGIFLWTFPEL  411 (515)
Q Consensus       400 dg~i~iw~~~~~  411 (515)
                      |+.|++|++...
T Consensus       365 D~~i~iW~~~~~  376 (380)
T 3iz6_a          365 DKNLKIWAFSGH  376 (380)
T ss_dssp             TSCEEEEECCSS
T ss_pred             CCCEEEEecCCC
Confidence            999999998754

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=100.00  E-value=6.8e-44  Score=322.41  Aligned_cols=292  Identities=19%  Similarity=0.315  Sum_probs=259.5

Q ss_pred             eEEEEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEE
Q psy17610         72 VTALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIW  151 (515)
Q Consensus        72 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw  151 (515)
                      .....+.+|.+.|++++|+|++++|++|+.||.|++|+..+++ ....+.+|...|.+++|+|++++|++++.|+.|++|
T Consensus        14 ~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vw   92 (312)
T 4ery_A           14 ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIW   92 (312)
T ss_dssp             EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC-EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred             eeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcc-cchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEE
Confidence            3456678999999999999999999999999999999999864 455667899999999999999999999999999999


Q ss_pred             eCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCC
Q psy17610        152 SVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEG  231 (515)
Q Consensus       152 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~  231 (515)
                      |+++++.+..+.+|...|.+++|+|++++|++++.|+.|++||+++++....+ ..|..+|.+++|+|++++|++++.|+
T Consensus        93 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~  171 (312)
T 4ery_A           93 DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL-PAHSDPVSAVHFNRDGSLIVSSSYDG  171 (312)
T ss_dssp             ETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEE-CCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred             ECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEe-cCCCCcEEEEEEcCCCCEEEEEeCCC
Confidence            99999999999999999999999999999999999999999999999988887 68999999999999999999999999


Q ss_pred             cEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCcc----EEEEEEcCCCc
Q psy17610        232 QVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSM----IMSAAYHPSEV  307 (515)
Q Consensus       232 ~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~~  307 (515)
                      .|++||+.... ........+...+..++|+|+++++++++.|+.|++||+++++....+..+..    +......+++.
T Consensus       172 ~i~~wd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (312)
T 4ery_A          172 LCRIWDTASGQ-CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGK  250 (312)
T ss_dssp             CEEEEETTTCC-EEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSC
T ss_pred             cEEEEECCCCc-eeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCc
Confidence            99999996432 22223345677899999999999999999999999999999998887764431    33333456789


Q ss_pred             EEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEc--CCCeEEEEEcc
Q psy17610        308 QLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGG--ADQIVKMWMYR  367 (515)
Q Consensus       308 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~dg~i~i~d~~  367 (515)
                      ++++++.|+.|++||+.+++.+..+..+. ..+.+++|+|+++++++++  .|+.|++|+.+
T Consensus       251 ~l~sg~~dg~i~vwd~~~~~~~~~~~~h~-~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d  311 (312)
T 4ery_A          251 WIVSGSEDNLVYIWNLQTKEIVQKLQGHT-DVVISTACHPTENIIASAALENDKTIKLWKSD  311 (312)
T ss_dssp             EEEECCTTSCEEEEETTTCCEEEEECCCS-SCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred             EEEEECCCCEEEEEECCCchhhhhhhccC-CcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence            99999999999999999999999998876 8899999999999999986  69999999864

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.7e-47  Score=359.90  Aligned_cols=327  Identities=14%  Similarity=0.168  Sum_probs=280.2

Q ss_pred             CCCcEEEEEEecCCC-EEEEE----------ecCceEEEEECCCCce--eEEeeccCccCeEEEEeCCCCcEEEEEecCC
Q psy17610         80 DDSGISSLQYNPVNN-KVFVG----------TVNCEIFLIDMNSGFT--LTLVNTCHTSAIYDLQFPVNFSSVFATCSKN  146 (515)
Q Consensus        80 ~~~~v~~~~~s~~~~-~l~~~----------~~d~~i~iw~~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~  146 (515)
                      +...|.+++|+|+++ +|++|          +.|+.|++||+.++..  .... ..|...|.+++|+|++++|++++.|+
T Consensus        11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg   89 (416)
T 2pm9_A           11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIAS-LQVDSKFNDLDWSHNNKIIAGALDNG   89 (416)
T ss_dssp             EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCC-CCCSSCEEEEEECSSSSCEEEEESSS
T ss_pred             hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEE-EecCCceEEEEECCCCCeEEEEccCC
Confidence            345788999999987 99999          8899999999998642  2222 34889999999999999999999999


Q ss_pred             cEEEEeCCC----CceeEEEEecCeEEEEEEEeeC-CCEEEEEeCCCeEEEEecCCCc------eEEEe--cCCCCCCeE
Q psy17610        147 DIRIWSVRT----LNELLRISVMNMICACIVFTYD-GKAILSGWNDGFIRCFTPQSGK------LKFII--PNAHNRGVT  213 (515)
Q Consensus       147 ~i~iw~~~~----~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~~~~~~~~~------~~~~~--~~~~~~~v~  213 (515)
                      .|++||+.+    .+.+..+..|...|.+++|+|+ +++|++++.|+.|++||+.+++      ....+  ...|...|.
T Consensus        90 ~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~  169 (416)
T 2pm9_A           90 SLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVI  169 (416)
T ss_dssp             CEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCC
T ss_pred             eEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCee
Confidence            999999987    4577888899999999999998 8999999999999999999876      32221  257889999


Q ss_pred             EEEEcCC-CCEEEEecCCCcEEEEEccCCceeeEEeeccc------cCceEEEEEecCC-CEEEEEeCCC---cEEEEEc
Q psy17610        214 ALAITQD-GTRLLSGGGEGQVRIWKLTRESQSLQCVLKEH------TSSVSVIQIKSDS-KEAMSASTDG---TCVLWDL  282 (515)
Q Consensus       214 ~~~~~~~-~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~-~~l~~~~~d~---~i~iwd~  282 (515)
                      +++|+|+ +.+|++++.|+.|++||++.  ......+..+      ...|.+++|+|++ .++++++.|+   .|++||+
T Consensus       170 ~~~~~~~~~~~l~~~~~dg~v~iwd~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~  247 (416)
T 2pm9_A          170 SLAWNQSLAHVFASAGSSNFASIWDLKA--KKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDL  247 (416)
T ss_dssp             EEEECSSCTTEEEEESSSSCEEEEETTT--TEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEET
T ss_pred             EEEeCCCCCcEEEEEcCCCCEEEEECCC--CCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeC
Confidence            9999998 78999999999999999964  3445555555      7889999999997 6899999998   9999999


Q ss_pred             ccc-eEEEEEE--cCccEEEEEEcC-CCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCC-CEEEEEcC
Q psy17610        283 IKS-TRLIIMI--LPSMIMSAAYHP-SEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDG-KYFLTGGA  357 (515)
Q Consensus       283 ~~~-~~~~~~~--~~~~~~~~~~~~-~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~  357 (515)
                      +++ .....+.  +...+.+++|+| +++++++++.|+.|++||+++++.+..+..+. ..+.+++|+|++ .+|++++.
T Consensus       248 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~-~~v~~~~~s~~~~~~l~s~~~  326 (416)
T 2pm9_A          248 RNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARG-NWCFKTKFAPEAPDLFACASF  326 (416)
T ss_dssp             TSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSS-SCCCCEEECTTCTTEEEECCS
T ss_pred             CCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCC-CceEEEEECCCCCCEEEEEec
Confidence            986 4555554  556899999999 99999999999999999999999999998876 889999999998 89999999


Q ss_pred             CCeEEEEEccCCeeeeecc-----------------------------------CCCCCeeEEEECCCCcEEEEEeCCCc
Q psy17610        358 DQIVKMWMYREGVPCFVGI-----------------------------------GHAASITKIKISPDKKVIVSVSADGG  402 (515)
Q Consensus       358 dg~i~i~d~~~~~~~~~~~-----------------------------------~~~~~i~~~~~~~~~~~l~~~~~dg~  402 (515)
                      ||.|++||+.++.......                                   .|..++++++|+|+|++|++++.|+.
T Consensus       327 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~  406 (416)
T 2pm9_A          327 DNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKG  406 (416)
T ss_dssp             SSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSC
T ss_pred             CCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCe
Confidence            9999999998765332221                                   16778889999999999999999999


Q ss_pred             EEEEeCCC
Q psy17610        403 IFLWTFPE  410 (515)
Q Consensus       403 i~iw~~~~  410 (515)
                      |++|++.+
T Consensus       407 v~~w~~~~  414 (416)
T 2pm9_A          407 VSITNPKI  414 (416)
T ss_dssp             BCCBCCCC
T ss_pred             EEEEEecc
Confidence            99999875

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.5e-46  Score=354.85  Aligned_cols=347  Identities=13%  Similarity=0.220  Sum_probs=283.9

Q ss_pred             CccCeEEEEeCCCCc-EEEEE----------ecCCcEEEEeCCCCc---eeEEEEecCeEEEEEEEeeCCCEEEEEeCCC
Q psy17610        123 HTSAIYDLQFPVNFS-SVFAT----------CSKNDIRIWSVRTLN---ELLRISVMNMICACIVFTYDGKAILSGWNDG  188 (515)
Q Consensus       123 h~~~v~~~~~~~~~~-~l~~~----------~~d~~i~iw~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg  188 (515)
                      +...|.+++|+|+++ +++++          +.|+.|++||+.+++   .+..+ .|...|.+++|+|++++|++++.||
T Consensus        11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg   89 (416)
T 2pm9_A           11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNNKIIAGALDNG   89 (416)
T ss_dssp             EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSSSCEEEEESSS
T ss_pred             hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCCCeEEEEccCC
Confidence            445689999999987 77777          679999999999876   33333 5788999999999999999999999


Q ss_pred             eEEEEecCC----CceEEEecCCCCCCeEEEEEcCC-CCEEEEecCCCcEEEEEccCCc------ee-eEEeeccccCce
Q psy17610        189 FIRCFTPQS----GKLKFIIPNAHNRGVTALAITQD-GTRLLSGGGEGQVRIWKLTRES------QS-LQCVLKEHTSSV  256 (515)
Q Consensus       189 ~i~~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iw~~~~~~------~~-~~~~~~~~~~~v  256 (515)
                      .|++||+.+    .+....+ ..|...|.+++|+|+ +++|++++.|+.|++||+....      .. .......|...|
T Consensus        90 ~v~vw~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v  168 (416)
T 2pm9_A           90 SLELYSTNEANNAINSMARF-SNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEV  168 (416)
T ss_dssp             CEEEECCSSTTSCCCEEEEC-CCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCC
T ss_pred             eEEEeecccccccccchhhc-cCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCe
Confidence            999999987    3455555 689999999999998 8999999999999999997543      11 122346789999


Q ss_pred             EEEEEecC-CCEEEEEeCCCcEEEEEcccceEEEEEEc-------CccEEEEEEcCCC-cEEEEEECCC---eEEEEeCC
Q psy17610        257 SVIQIKSD-SKEAMSASTDGTCVLWDLIKSTRLIIMIL-------PSMIMSAAYHPSE-VQLITCSTNK---MIDYWETC  324 (515)
Q Consensus       257 ~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-------~~~~~~~~~~~~~-~~l~~~~~~~---~i~~~d~~  324 (515)
                      .+++|+|+ +.++++++.|+.|++||+++++....+..       ...+.+++|+|++ .++++++.++   .|++||++
T Consensus       169 ~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~  248 (416)
T 2pm9_A          169 ISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLR  248 (416)
T ss_dssp             CEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETT
T ss_pred             eEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCC
Confidence            99999999 78999999999999999999998888876       4679999999997 6899999998   99999999


Q ss_pred             CC-ceEEEEe-cCCCccEEEEEEcC-CCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCC-cEEEEEeCC
Q psy17610        325 DG-SIIRSLE-GSDVAAVNCVDFVD-DGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDK-KVIVSVSAD  400 (515)
Q Consensus       325 ~~-~~~~~~~-~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d  400 (515)
                      ++ .++..+. .+. ..+.+++|+| ++++|++++.||.|++||+++++++..+..|...|.+++|+|++ .+|++++.|
T Consensus       249 ~~~~~~~~~~~~~~-~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d  327 (416)
T 2pm9_A          249 NANTPLQTLNQGHQ-KGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFD  327 (416)
T ss_dssp             STTSCSBCCCSCCS-SCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSS
T ss_pred             CCCCCcEEeecCcc-CceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecC
Confidence            86 5566666 444 8999999999 99999999999999999999999999999999999999999998 899999999


Q ss_pred             CcEEEEeCCCCcCccCCCccc-c-----eeeecc----------cccccceeeecCcccEEEeeeccCCcEEEEeecCCe
Q psy17610        401 GGIFLWTFPELEDDVGDSRSL-S-----SKISRS----------TARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKM  464 (515)
Q Consensus       401 g~i~iw~~~~~~~~~~~~~~~-~-----~~~~~~----------~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~  464 (515)
                      +.|++|++............. .     ......          ..... .....+...+..++|+|+|++|++++.|+.
T Consensus       328 ~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~s~dg~~la~~~~d~~  406 (416)
T 2pm9_A          328 NKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHL-QAPTWYGEPSPAAHWAFGGKLVQITPDGKG  406 (416)
T ss_dssp             SEEEEEESCCCCCSSCC----------------------CCSCCCSSCC-CCCSTTCCCSCCCEEETTTEEECBCTTSSC
T ss_pred             CcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccc-cCCccccCCccceEEeeCCeEEEEeCCCCe
Confidence            999999998765433221100 0     000000          00000 111225567889999999999999999999


Q ss_pred             EEEEecCCC
Q psy17610        465 IDYWETCDG  473 (515)
Q Consensus       465 v~iwd~~~~  473 (515)
                      |+||++.+.
T Consensus       407 v~~w~~~~~  415 (416)
T 2pm9_A          407 VSITNPKIS  415 (416)
T ss_dssp             BCCBCCCCC
T ss_pred             EEEEEeccC
Confidence            999998764

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=100.00  E-value=2.9e-44  Score=328.78  Aligned_cols=290  Identities=16%  Similarity=0.186  Sum_probs=244.8

Q ss_pred             eEEeeccCccCeEEEEe-----CC-CCcEEEEEecCCcEEEEeCCCC-------ceeEEEEecCeEEEEEEEeeCCCEEE
Q psy17610        116 LTLVNTCHTSAIYDLQF-----PV-NFSSVFATCSKNDIRIWSVRTL-------NELLRISVMNMICACIVFTYDGKAIL  182 (515)
Q Consensus       116 ~~~~~~~h~~~v~~~~~-----~~-~~~~l~~~~~d~~i~iw~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~  182 (515)
                      ....+.+|.+.|++++|     ++ ++++|++++.|++|++||+.+.       .+...+.+|...|.+++|+|++.+++
T Consensus        13 ~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~   92 (343)
T 2xzm_R           13 KRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAI   92 (343)
T ss_dssp             EEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEE
T ss_pred             eeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEE
Confidence            44567889999999999     76 8999999999999999999753       35667889999999999999999999


Q ss_pred             EEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEe
Q psy17610        183 SGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIK  262 (515)
Q Consensus       183 ~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~  262 (515)
                      +++.|+.|++||+++++....+ .+|...|.+++|+|++++|++++.|+.|++||+............+|...|.+++|+
T Consensus        93 s~s~D~~v~lwd~~~~~~~~~~-~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~  171 (343)
T 2xzm_R           93 SSSWDKTLRLWDLRTGTTYKRF-VGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYS  171 (343)
T ss_dssp             EEETTSEEEEEETTSSCEEEEE-ECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEEC
T ss_pred             EEcCCCcEEEEECCCCcEEEEE-cCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeec
Confidence            9999999999999999998887 689999999999999999999999999999999632222222233788999999999


Q ss_pred             cCC----------CEEEEEeCCCcEEEEEcccceEEEEE-EcCccEEEEEEcCCCcEEEEEECCCeEEEEeCC-CCceEE
Q psy17610        263 SDS----------KEAMSASTDGTCVLWDLIKSTRLIIM-ILPSMIMSAAYHPSEVQLITCSTNKMIDYWETC-DGSIIR  330 (515)
Q Consensus       263 ~~~----------~~l~~~~~d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~-~~~~~~  330 (515)
                      |++          .++++++.|+.|++||.. .+....+ .+...+.+++|+|++++|++++.|+.|++||+. ......
T Consensus       172 ~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~  250 (343)
T 2xzm_R          172 PIMKSANKVQPFAPYFASVGWDGRLKVWNTN-FQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQR  250 (343)
T ss_dssp             CCCCSCSCCCSSCCEEEEEETTSEEEEEETT-TEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSE
T ss_pred             cccccccccCCCCCEEEEEcCCCEEEEEcCC-CceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccce
Confidence            987          789999999999999954 4444444 455689999999999999999999999999994 444455


Q ss_pred             EEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeee--ecc-----------CCCCCeeEEEECCCCcEEEEE
Q psy17610        331 SLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCF--VGI-----------GHAASITKIKISPDKKVIVSV  397 (515)
Q Consensus       331 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~--~~~-----------~~~~~i~~~~~~~~~~~l~~~  397 (515)
                      .+...  ..+.+++|+|++++++++. |+.+++|++.+++...  .+.           +|...|.+++|+|++++|+++
T Consensus       251 ~~~~~--~~v~~v~~sp~~~~la~~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg  327 (343)
T 2xzm_R          251 EFDAG--STINQIAFNPKLQWVAVGT-DQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAG  327 (343)
T ss_dssp             EEECS--SCEEEEEECSSSCEEEEEE-SSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEE
T ss_pred             eecCC--CcEEEEEECCCCCEEEEEC-CCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEe
Confidence            55433  5799999999999887664 7789999998765433  332           688899999999999999999


Q ss_pred             eCCCcEEEEeCCC
Q psy17610        398 SADGGIFLWTFPE  410 (515)
Q Consensus       398 ~~dg~i~iw~~~~  410 (515)
                      +.||.|++|++.+
T Consensus       328 ~~Dg~v~~w~~~~  340 (343)
T 2xzm_R          328 FTDGVIRTFSFET  340 (343)
T ss_dssp             ETTSEEEEEEEEE
T ss_pred             cCCceEEEEEEEc
Confidence            9999999999754

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=100.00  E-value=8.3e-45  Score=330.29  Aligned_cols=286  Identities=12%  Similarity=0.116  Sum_probs=233.6

Q ss_pred             cCCCcEEEEEEecCCCEEEEEecCceEEEEECCC----------CceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcE
Q psy17610         79 KDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNS----------GFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDI  148 (515)
Q Consensus        79 ~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~----------~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i  148 (515)
                      .|...|.+++|+|||++|++++ |+++++||...          ..........|...|.+++|+|++ .+++++.||+|
T Consensus        28 ~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~v  105 (344)
T 4gqb_B           28 CMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSGAV  105 (344)
T ss_dssp             SCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTSEE
T ss_pred             cccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCCEE
Confidence            4778899999999999998887 66777776321          011111122366789999999995 78899999999


Q ss_pred             EEEeCCCCceeEEE----EecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCC-CE
Q psy17610        149 RIWSVRTLNELLRI----SVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDG-TR  223 (515)
Q Consensus       149 ~iw~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~  223 (515)
                      +|||+++++.+..+    .+|...|.+++|+|++++|++++.|+.|++||+++++.+..+ .+|...|.+++|+|++ .+
T Consensus       106 ~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~-~~h~~~V~~~~~~~~~~~~  184 (344)
T 4gqb_B          106 ELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSY-RAHAAQVTCVAASPHKDSV  184 (344)
T ss_dssp             EEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE-CCCSSCEEEEEECSSCTTE
T ss_pred             EEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEE-cCcCCceEEEEecCCCCCc
Confidence            99999998865543    478999999999999999999999999999999999999888 7999999999999987 47


Q ss_pred             EEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecC-CCEEEEEeCCCcEEEEEcccceEEEEEEc-CccEEEEE
Q psy17610        224 LLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSD-SKEAMSASTDGTCVLWDLIKSTRLIIMIL-PSMIMSAA  301 (515)
Q Consensus       224 l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~  301 (515)
                      |++++.|+.|++||++............|...+.+++|+|+ ++++++++.||+|++||+++++.+..+.. ...+.+++
T Consensus       185 l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~  264 (344)
T 4gqb_B          185 FLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLV  264 (344)
T ss_dssp             EEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEE
T ss_pred             eeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEE
Confidence            89999999999999975544333334456678999999985 56788999999999999999988887765 45899999


Q ss_pred             EcCCC-cEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCC-EEEEEcCCCeEEEEEccCC
Q psy17610        302 YHPSE-VQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGK-YFLTGGADQIVKMWMYREG  369 (515)
Q Consensus       302 ~~~~~-~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~  369 (515)
                      |+|++ ++|++++.|+.|++||+.+++.. .+.+|. ..|++++|+|+++ +|++++.|++|++|++.+.
T Consensus       265 fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~-~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~  332 (344)
T 4gqb_B          265 FSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHR-DFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTE  332 (344)
T ss_dssp             ECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCS-SCEEEEEECSSSTTEEEEEETTSCEEEEECCC-
T ss_pred             EccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCC-CCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCC
Confidence            99998 57899999999999999988765 455554 8999999999886 6778999999999999764

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=100.00  E-value=2e-45  Score=347.48  Aligned_cols=352  Identities=13%  Similarity=0.129  Sum_probs=289.9

Q ss_pred             EEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEE
Q psy17610         84 ISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRIS  163 (515)
Q Consensus        84 v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~  163 (515)
                      +++++|+|++++|++++.|+.|++||..++. ....+..| ..+....|+|++++|++++.|+.|++||+.+++....+.
T Consensus        59 ~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~-~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  136 (420)
T 3vl1_A           59 GKGNTFEKVGSHLYKARLDGHDFLFNTIIRD-GSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQ  136 (420)
T ss_dssp             CTTCEEEEEETTEEEEEETTEEEEEECCSEE-TTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETT
T ss_pred             ccceeeeecCCeEEEEEcCCcEEEEEecccc-eeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecc
Confidence            4589999999999999999999999998843 33344444 445555789999999999999999999999988888778


Q ss_pred             ecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCce
Q psy17610        164 VMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQ  243 (515)
Q Consensus       164 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~  243 (515)
                      .|...|.+++|+|++++|++++.|+.|++||+.+++....+ .+|...|.+++|+|++++|++++.|+.|++||++.  .
T Consensus       137 ~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~--~  213 (420)
T 3vl1_A          137 AHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTL-IGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGT--G  213 (420)
T ss_dssp             SSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEE-ECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTT--T
T ss_pred             cccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEE-cCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCC--C
Confidence            89999999999999999999999999999999999988887 68999999999999999999999999999999964  3


Q ss_pred             eeEEeec---cccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEE
Q psy17610        244 SLQCVLK---EHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDY  320 (515)
Q Consensus       244 ~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~  320 (515)
                      .....+.   .|...+.++++.+.+...+.                    ......+.+++|+|+++++++++.++.|++
T Consensus       214 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~--------------------~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i  273 (420)
T 3vl1_A          214 TTIHTFNRKENPHDGVNSIALFVGTDRQLH--------------------EISTSKKNNLEFGTYGKYVIAGHVSGVITV  273 (420)
T ss_dssp             EEEEEECBTTBTTCCEEEEEEEECCCSSCG--------------------GGCCCCCCTTCSSCTTEEEEEEETTSCEEE
T ss_pred             ceeEEeecCCCCCCCccEEEEecCCcceee--------------------ecccCcccceEEcCCCCEEEEEcCCCeEEE
Confidence            4444554   46778888888876543210                    012345778899999999999999999999


Q ss_pred             EeCCCCceEEEEecCCCccEEEEEEcCCCC-EEEEEcCCCeEEEEEccCCee-eeeccC-CCCCeeEEEECCCCcEEEEE
Q psy17610        321 WETCDGSIIRSLEGSDVAAVNCVDFVDDGK-YFLTGGADQIVKMWMYREGVP-CFVGIG-HAASITKIKISPDKKVIVSV  397 (515)
Q Consensus       321 ~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~-~~~~~~-~~~~i~~~~~~~~~~~l~~~  397 (515)
                      ||+++++.+..+...+...+.+++|+|+++ +|++|+.||.|++||+++++. +..+.. |...|.++.+ +++++|+++
T Consensus       274 ~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~  352 (420)
T 3vl1_A          274 HNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSS  352 (420)
T ss_dssp             EETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEE
T ss_pred             EECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEe
Confidence            999999999888876668999999999999 999999999999999998743 666665 6778888855 578899999


Q ss_pred             eCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCc---EEEEeecCCeEEEEecCC
Q psy17610        398 SADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEV---QLITCSTNKMIDYWETCD  472 (515)
Q Consensus       398 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~---~l~~~~~dg~v~iwd~~~  472 (515)
                      +.|+.|++|++..........           ..........+...+.+++|+|+++   .+++.+.+|.+.+|++++
T Consensus       353 ~~d~~v~iw~~~~~~~~~~~~-----------~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~  419 (420)
T 3vl1_A          353 GFDTSIKLDIISDPESERPAI-----------EFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN  419 (420)
T ss_dssp             TTTEEEEEEEECCTTCCSCEE-----------CTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred             cCCccEEEEeccCCCCCccce-----------eccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence            999999999988743211110           0111223445677899999999999   777778899999999864

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=100.00  E-value=1.8e-44  Score=340.94  Aligned_cols=340  Identities=15%  Similarity=0.187  Sum_probs=286.8

Q ss_pred             CccCCCCceEEEecCCCCeEEEEcCCCCCCcccccccceEEeeccccccccccccccccccCcceeeeccceEEEEEecC
Q psy17610          1 MKTTPNDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMGCYGKLIKKKVSTKLKDVNAEDVSLYSAGVTALYLLKD   80 (515)
Q Consensus         1 ~~~~~~~~~~~~g~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (515)
                      ++|+|++++|++|+.+|.|.+||+.+.+....+                                            ..|
T Consensus        62 ~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~--------------------------------------------~~~   97 (420)
T 3vl1_A           62 NTFEKVGSHLYKARLDGHDFLFNTIIRDGSKML--------------------------------------------KRA   97 (420)
T ss_dssp             CEEEEEETTEEEEEETTEEEEEECCSEETTTTS--------------------------------------------CSC
T ss_pred             eeeeecCCeEEEEEcCCcEEEEEecccceeeEE--------------------------------------------ecC
Confidence            468899999999999999999997764211110                                            012


Q ss_pred             CCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeE
Q psy17610         81 DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELL  160 (515)
Q Consensus        81 ~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~  160 (515)
                       ..+...+|+|++++||+|+.||.|++||+.++ .....+.+|.+.|.+++|+|++++|++++.|+.|++||+.+++.+.
T Consensus        98 -~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~  175 (420)
T 3vl1_A           98 -DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFN-LQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPR  175 (420)
T ss_dssp             -CEEEEEEECSSSCEEEEEETTSCEEEECTTSC-EEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCE
T ss_pred             -CceEEEEEecCCCEEEEEECCCCEEEEeCCCc-ceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCce
Confidence             44555678999999999999999999999985 5556667899999999999999999999999999999999999999


Q ss_pred             EEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecC--CCCCCeEEEEEcCCCCEEEEecCCCcEEEEEc
Q psy17610        161 RISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPN--AHNRGVTALAITQDGTRLLSGGGEGQVRIWKL  238 (515)
Q Consensus       161 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~  238 (515)
                      .+.+|...|.+++|+|++++|++++.|+.|++||+++++....+..  .|...+.+++|.+.+...              
T Consensus       176 ~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--------------  241 (420)
T 3vl1_A          176 TLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQ--------------  241 (420)
T ss_dssp             EEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSS--------------
T ss_pred             EEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcce--------------
Confidence            9999999999999999999999999999999999999998887742  467788888887654321              


Q ss_pred             cCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEc--CccEEEEEEcCCCc-EEEEEECC
Q psy17610        239 TRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMIL--PSMIMSAAYHPSEV-QLITCSTN  315 (515)
Q Consensus       239 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~-~l~~~~~~  315 (515)
                               ....+...+.+++|+|+++++++++.||.|++||+++++....+..  ...+.+++|+|++. ++++++.|
T Consensus       242 ---------~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~d  312 (420)
T 3vl1_A          242 ---------LHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYEN  312 (420)
T ss_dssp             ---------CGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETT
T ss_pred             ---------eeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCC
Confidence                     1234567788999999999999999999999999999988777753  45799999999998 99999999


Q ss_pred             CeEEEEeCCCCce-EEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCC---------eeeeeccCCCCCeeEE
Q psy17610        316 KMIDYWETCDGSI-IRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREG---------VPCFVGIGHAASITKI  385 (515)
Q Consensus       316 ~~i~~~d~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~---------~~~~~~~~~~~~i~~~  385 (515)
                      +.|++||+++++. +..+..++...+.++.+ +++++|++++.||.|++|++...         .....+..|...|.++
T Consensus       313 g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  391 (420)
T 3vl1_A          313 GMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQF  391 (420)
T ss_dssp             SEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEE
T ss_pred             CeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEE
Confidence            9999999998754 77888766678888855 57889999999999999998763         1223456788999999


Q ss_pred             EECCCCc---EEEEEeCCCcEEEEeCCC
Q psy17610        386 KISPDKK---VIVSVSADGGIFLWTFPE  410 (515)
Q Consensus       386 ~~~~~~~---~l~~~~~dg~i~iw~~~~  410 (515)
                      +|+|+++   .+++++.+|.+.+|++..
T Consensus       392 ~~s~~~~~~g~l~a~g~~g~~~~~~~~~  419 (420)
T 3vl1_A          392 CYVSDDESNGEVLEVGKNNFCALYNLSN  419 (420)
T ss_dssp             EEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred             EEccCCCCcceEEEEcCCceEEEEeccC
Confidence            9999999   778888999999999864

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=100.00  E-value=8.3e-43  Score=319.80  Aligned_cols=293  Identities=17%  Similarity=0.298  Sum_probs=260.6

Q ss_pred             EEEecCCCcEEEEEEecC-CCEEEEEecCceEEEEECCCCc----eeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEE
Q psy17610         75 LYLLKDDSGISSLQYNPV-NNKVFVGTVNCEIFLIDMNSGF----TLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIR  149 (515)
Q Consensus        75 ~~~~~~~~~v~~~~~s~~-~~~l~~~~~d~~i~iw~~~~~~----~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~  149 (515)
                      ..+.+|.+.|++|+|+|+ +++||+|+.|++|++||+.+++    .....+.+|...|.+++|+|++++|++++.|+.|+
T Consensus        32 ~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~  111 (340)
T 4aow_A           32 GTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLR  111 (340)
T ss_dssp             EEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred             EEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccce
Confidence            357799999999999997 6899999999999999997643    23456788999999999999999999999999999


Q ss_pred             EEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCC--CEEEEe
Q psy17610        150 IWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDG--TRLLSG  227 (515)
Q Consensus       150 iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~  227 (515)
                      +|+............+...+..+.+++++++|++++.|+.+++||............+|...+..++|++++  .+++++
T Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~  191 (340)
T 4aow_A          112 LWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSC  191 (340)
T ss_dssp             EEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEE
T ss_pred             EEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEE
Confidence            999999988888888888999999999999999999999999999988777666667899999999998854  578899


Q ss_pred             cCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCc
Q psy17610        228 GGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEV  307 (515)
Q Consensus       228 ~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (515)
                      +.|+.|++||+.  .......+.+|...|.+++|+|++++|++++.|+.|++||+++.+.+..+.....+..++++|++.
T Consensus       192 ~~d~~i~i~d~~--~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~  269 (340)
T 4aow_A          192 GWDKLVKVWNLA--NCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRY  269 (340)
T ss_dssp             ETTSCEEEEETT--TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSS
T ss_pred             cCCCEEEEEECC--CCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCc
Confidence            999999999995  456677788999999999999999999999999999999999999999999999999999999876


Q ss_pred             EEEEEECCCeEEEEeCCCCceEEEEec--------CCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCe
Q psy17610        308 QLITCSTNKMIDYWETCDGSIIRSLEG--------SDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGV  370 (515)
Q Consensus       308 ~l~~~~~~~~i~~~d~~~~~~~~~~~~--------~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~  370 (515)
                      .+ +++.|+.|++||++++..+..+..        .+...|++++|+|+|++|++|+.||.|+|||+++|+
T Consensus       270 ~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt  339 (340)
T 4aow_A          270 WL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT  339 (340)
T ss_dssp             EE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred             ee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence            55 556789999999999887776653        234789999999999999999999999999999875

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=100.00  E-value=3.5e-43  Score=327.64  Aligned_cols=294  Identities=21%  Similarity=0.364  Sum_probs=247.0

Q ss_pred             CCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeecccc------------------CceEEEEEecCCCEE
Q psy17610        207 AHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHT------------------SSVSVIQIKSDSKEA  268 (515)
Q Consensus       207 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~------------------~~v~~~~~~~~~~~l  268 (515)
                      .|...|.+++|+|+|++|++|+ ++.+++|++...  .....+..|.                  ..|.+++|+|++++|
T Consensus        62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l  138 (393)
T 1erj_A           62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDG--SLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFL  138 (393)
T ss_dssp             ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTC--CEEEEECC-----------------CCCCBEEEEEECTTSSEE
T ss_pred             CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCC--CEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEE
Confidence            5999999999999999999987 689999999543  3333343332                  248999999999999


Q ss_pred             EEEeCCCcEEEEEcccceEEEEEEc-CccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcC
Q psy17610        269 MSASTDGTCVLWDLIKSTRLIIMIL-PSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVD  347 (515)
Q Consensus       269 ~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~  347 (515)
                      ++++.|+.|++||+.+++....+.. ...+.+++|+|++.++++++.|+.|++||+++++....+..+  ..+.+++++|
T Consensus       139 ~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~--~~v~~~~~~~  216 (393)
T 1erj_A          139 ATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIE--DGVTTVAVSP  216 (393)
T ss_dssp             EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECS--SCEEEEEECS
T ss_pred             EEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcC--CCcEEEEEEC
Confidence            9999999999999999988877764 457999999999999999999999999999999988887754  6799999999


Q ss_pred             -CCCEEEEEcCCCeEEEEEccCCeeeeec-------cCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCc
Q psy17610        348 -DGKYFLTGGADQIVKMWMYREGVPCFVG-------IGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSR  419 (515)
Q Consensus       348 -~~~~l~~~~~dg~i~i~d~~~~~~~~~~-------~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~  419 (515)
                       ++++|++|+.|+.|++||+++++.+..+       .+|...|.+++|+|++++|++++.|+.|++||+...........
T Consensus       217 ~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~  296 (393)
T 1erj_A          217 GDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKT  296 (393)
T ss_dssp             TTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-----------
T ss_pred             CCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccC
Confidence             8999999999999999999998877665       57999999999999999999999999999999976532111000


Q ss_pred             ccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcC-----
Q psy17610        420 SLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVD-----  494 (515)
Q Consensus       420 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~-----  494 (515)
                              ...........+|...|.+++|+|++++|++++.|+.|++||+.+++++..+.+|. ..|.+++|++     
T Consensus       297 --------~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~-~~v~~v~~~~~~~~~  367 (393)
T 1erj_A          297 --------PNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHR-NSVISVAVANGSSLG  367 (393)
T ss_dssp             ------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCS-SCEEEEEECSSCTTC
T ss_pred             --------CCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCC-CCEEEEEecCCcCcC
Confidence                    00111223455788889999999999999999999999999999999999999997 8999999986     


Q ss_pred             -CCcEEEEeecCCeEEEEEEe
Q psy17610        495 -DGKYFLTGGADQIVKICLYI  514 (515)
Q Consensus       495 -~~~~l~s~~~dg~v~iw~~~  514 (515)
                       ++++|++|+.||+|++|++-
T Consensus       368 p~~~~l~sgs~Dg~i~iW~~~  388 (393)
T 1erj_A          368 PEYNVFATGSGDCKARIWKYK  388 (393)
T ss_dssp             TTCEEEEEEETTSEEEEEEEE
T ss_pred             CCCCEEEEECCCCcEEECccc
Confidence             78999999999999999974

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2e-43  Score=321.03  Aligned_cols=292  Identities=17%  Similarity=0.247  Sum_probs=236.9

Q ss_pred             eeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCc--eeEEE-Ee-cCeEEEEEEEeeCCCEEEEEeCCCeE
Q psy17610        115 TLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLN--ELLRI-SV-MNMICACIVFTYDGKAILSGWNDGFI  190 (515)
Q Consensus       115 ~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~--~~~~~-~~-~~~~v~~~~~~~~~~~l~~~~~dg~i  190 (515)
                      .+...+.+|.++|.+++|+|+  .|++++.|++|++||+.++.  .+..+ .. |...|.+++|+|++++|++++.|+.|
T Consensus         5 ~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v   82 (330)
T 2hes_X            5 NLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTV   82 (330)
T ss_dssp             EEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCE
T ss_pred             ccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcE
Confidence            445567789999999999998  89999999999999998753  34444 23 88899999999999999999999999


Q ss_pred             EEEecCC-------CceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCC--ceeeEEeeccccCceEEEEE
Q psy17610        191 RCFTPQS-------GKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRE--SQSLQCVLKEHTSSVSVIQI  261 (515)
Q Consensus       191 ~~~~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~--~~~~~~~~~~~~~~v~~~~~  261 (515)
                      ++||++.       .+....+ .+|...|.+++|+|++++|++|+.|+.|++||++..  .......+.+|...|.+++|
T Consensus        83 ~iw~~~~~~~~~~~~~~~~~~-~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~  161 (330)
T 2hes_X           83 SIWAKEESADRTFEMDLLAII-EGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIW  161 (330)
T ss_dssp             EEEEC-------CCCEEEEEE-C----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEE
T ss_pred             EEEEcccCcCccccceeEEEE-cCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEE
Confidence            9999853       2344555 689999999999999999999999999999999532  23556678899999999999


Q ss_pred             ecCCCEEEEEeCCCcEEEEEcccc--eEEEEEE-cCccEEEEEEcCC--CcEEEEEECCCeEEEEeCCCC--------ce
Q psy17610        262 KSDSKEAMSASTDGTCVLWDLIKS--TRLIIMI-LPSMIMSAAYHPS--EVQLITCSTNKMIDYWETCDG--------SI  328 (515)
Q Consensus       262 ~~~~~~l~~~~~d~~i~iwd~~~~--~~~~~~~-~~~~~~~~~~~~~--~~~l~~~~~~~~i~~~d~~~~--------~~  328 (515)
                      +|++.+|++++.|++|++||..++  +++..+. +...+.+++|+|+  +..+++++.|+.|++||+..+        ..
T Consensus       162 ~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~  241 (330)
T 2hes_X          162 HPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVC  241 (330)
T ss_dssp             CSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEE
T ss_pred             CCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEE
Confidence            999999999999999999998766  4555554 4468999999998  678999999999999998764        33


Q ss_pred             EEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCe--eee-eccCCCC-CeeEEEECC--CCcEEEEEeCCCc
Q psy17610        329 IRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGV--PCF-VGIGHAA-SITKIKISP--DKKVIVSVSADGG  402 (515)
Q Consensus       329 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~--~~~-~~~~~~~-~i~~~~~~~--~~~~l~~~~~dg~  402 (515)
                      ...+...+...|.+++|++++ +|++++.||.|++||..+++  ... ...+|.. .|.+++|+|  ++++|++++.||.
T Consensus       242 ~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~  320 (330)
T 2hes_X          242 EAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGI  320 (330)
T ss_dssp             EEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSE
T ss_pred             eeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCc
Confidence            444444355899999999765 79999999999999998773  332 3467877 899999999  7899999999999


Q ss_pred             EEEEeCCC
Q psy17610        403 IFLWTFPE  410 (515)
Q Consensus       403 i~iw~~~~  410 (515)
                      |++|++..
T Consensus       321 v~~W~~~~  328 (330)
T 2hes_X          321 VNFWSLEK  328 (330)
T ss_dssp             EEEEEC--
T ss_pred             EEEEEecc
Confidence            99999754

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.7e-45  Score=349.67  Aligned_cols=351  Identities=8%  Similarity=0.053  Sum_probs=250.3

Q ss_pred             EEEecCCCcEEEEEEecCC---------CEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecC
Q psy17610         75 LYLLKDDSGISSLQYNPVN---------NKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSK  145 (515)
Q Consensus        75 ~~~~~~~~~v~~~~~s~~~---------~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d  145 (515)
                      .....+.+.|.+|+|+|++         ++||+|+.++..                        -..+|+++.+++++.|
T Consensus       127 ~~~~~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~------------------------~~~~~~~~~laS~s~D  182 (524)
T 2j04_B          127 GFIYNVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMD------------------------EPLNEHLEMFDKEKHS  182 (524)
T ss_dssp             EEEEECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------------------------------C
T ss_pred             eEEEECCCceeEEEecccCCCCccCcCCeEEEEEEecccC------------------------CccchhhhhhccCCCC
Confidence            3345578999999999987         799999877420                        0137899999999999


Q ss_pred             CcEEEEeCCCCcee----EEEEecCeEEEEEEEeeC------CCEEEEEeCCCeEEEEecCCCce-----------EEEe
Q psy17610        146 NDIRIWSVRTLNEL----LRISVMNMICACIVFTYD------GKAILSGWNDGFIRCFTPQSGKL-----------KFII  204 (515)
Q Consensus       146 ~~i~iw~~~~~~~~----~~~~~~~~~v~~~~~~~~------~~~l~~~~~dg~i~~~~~~~~~~-----------~~~~  204 (515)
                      ++|+|||+.+++..    ..+..|.+.|.+++|+|+      +.+|++++.||+|++||+.+++.           ...+
T Consensus       183 ~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l  262 (524)
T 2j04_B          183 SCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTL  262 (524)
T ss_dssp             EEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEE
T ss_pred             ceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEE
Confidence            99999999887643    345667888999999997      57999999999999999987642           1233


Q ss_pred             cCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEE--EEecCC-CEEEEEeCCCcEEEEE
Q psy17610        205 PNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVI--QIKSDS-KEAMSASTDGTCVLWD  281 (515)
Q Consensus       205 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~-~~l~~~~~d~~i~iwd  281 (515)
                       .+|...|++++|++++ .|++|+.||+|++||++.. ..+...+.+|...|.++  .|+|++ .+|++++.|++|++||
T Consensus       263 -~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~-~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD  339 (524)
T 2j04_B          263 -SLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDP-EVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFN  339 (524)
T ss_dssp             -CCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBC-SSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEEC
T ss_pred             -EcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCC-CCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEE
Confidence             5799999999999864 8999999999999999643 23345578899999999  567887 8899999999999999


Q ss_pred             cccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCC-CccEEEEEEcCCCCEEEEEcCCCe
Q psy17610        282 LIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSD-VAAVNCVDFVDDGKYFLTGGADQI  360 (515)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~dg~  360 (515)
                      +++++....+                                         ..+. ...+.+++|+|+++.+++++.|++
T Consensus       340 ~~~~~~~~~~-----------------------------------------~~~~~~~~v~~v~fsp~~~~l~s~~~d~t  378 (524)
T 2j04_B          340 PKDIATTKTT-----------------------------------------VSRFRGSNLVPVVYCPQIYSYIYSDGASS  378 (524)
T ss_dssp             GGGHHHHCEE-----------------------------------------EEECSCCSCCCEEEETTTTEEEEECSSSE
T ss_pred             CCCCCccccc-----------------------------------------ccccccCcccceEeCCCcCeEEEeCCCCc
Confidence            8775432211                                         1111 024678999999999999999999


Q ss_pred             EEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecC
Q psy17610        361 VKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMIL  440 (515)
Q Consensus       361 i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  440 (515)
                      |++||++++..+..+.+|...|++++|+|++++|++|+.|++|++|++.....     ......           .....
T Consensus       379 v~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~-----~~~~~~-----------~~~~~  442 (524)
T 2j04_B          379 LRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRLL-----HGIKNS-----------SATQK  442 (524)
T ss_dssp             EEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTT-----TCC-----------------CC
T ss_pred             EEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhc-----cccccC-----------cccee
Confidence            99999999988888889999999999999999999999999999999754210     000000           00001


Q ss_pred             cccEEEeeeccCCcEEEEeecCCeEEEEecC-CCeeeeeecccccceEEEEEEcCCCc---EEEEeecCCeEEEEEE
Q psy17610        441 PSMIMSAAYHPSEVQLITCSTNKMIDYWETC-DGSIIRSLEGSDVAAVNCVDFVDDGK---YFLTGGADQIVKICLY  513 (515)
Q Consensus       441 ~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~-~~~~~~~~~~~~~~~v~~~~~s~~~~---~l~s~~~dg~v~iw~~  513 (515)
                      ...+..++|+|+++.+.. ..  .+++|+.. ++.++..+.+|. .+|.+++|+|+++   +||+|+.||+||||++
T Consensus       443 ~~~v~~v~~sp~g~~~~~-~~--~~~~~~~~~~g~~~~~l~gh~-~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l  515 (524)
T 2j04_B          443 SLRLWKWDYSIKDDKYRI-DS--SYEVYPLTVNDVSKAKIDAHG-INITCTKWNETSAGGKCYAFSNSAGLLTLEYL  515 (524)
T ss_dssp             CCEEEECBCCSSSCEEEE-CC--CCCCCC-------------CC-CSCCCEEECCSTTTTTEEEEECTTSEEEEEEC
T ss_pred             eeEEEEeccCCCCCeEEc-cC--CceecccccCCcceeeecCCC-ceEEEEECCCCCCccHHHHhhccCceEEEEEc
Confidence            124778999999985533 22  23444433 577888899887 8999999999965   9999999999999986

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.9e-42  Score=321.27  Aligned_cols=300  Identities=15%  Similarity=0.211  Sum_probs=269.9

Q ss_pred             ccceEEEEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcE
Q psy17610         69 SAGVTALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDI  148 (515)
Q Consensus        69 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i  148 (515)
                      -.......+.+|.+.|++++|+|++++|++|+.||.|++||+.+++ ....+.+|...|.+++|+|++++|++++.|+.|
T Consensus        20 G~~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~-~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i   98 (369)
T 3zwl_B           20 GSHMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGE-RLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSI   98 (369)
T ss_dssp             CCSEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCC-EEEEECCCSSCEEEEEECTTSSEEEEEETTTEE
T ss_pred             ccccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCch-hhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeE
Confidence            3446778899999999999999999999999999999999999864 445667799999999999999999999999999


Q ss_pred             EEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCC-----CeEEEEecCCCce-----------EEEecCCCCC--
Q psy17610        149 RIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWND-----GFIRCFTPQSGKL-----------KFIIPNAHNR--  210 (515)
Q Consensus       149 ~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~~~~~~~~~~-----------~~~~~~~~~~--  210 (515)
                      ++||+.+++.+..+. +...+.+++|+|+++++++++.+     +.|.+||+..+..           ...+ ..|..  
T Consensus        99 ~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  176 (369)
T 3zwl_B           99 KLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKI-ITHEGLD  176 (369)
T ss_dssp             EEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEE-ECCTTCC
T ss_pred             EEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeec-cCCcCcc
Confidence            999999999988888 88899999999999999999998     9999999876532           2222 24444  


Q ss_pred             CeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEE
Q psy17610        211 GVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLII  290 (515)
Q Consensus       211 ~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~  290 (515)
                      .+.+++|+|++++|++++.||.|++||+... ......+..|...|.+++|+|++++|++++.|+.|++||+++++....
T Consensus       177 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~  255 (369)
T 3zwl_B          177 AATVAGWSTKGKYIIAGHKDGKISKYDVSNN-YEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKK  255 (369)
T ss_dssp             CEEEEEECGGGCEEEEEETTSEEEEEETTTT-TEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred             ceeEEEEcCCCCEEEEEcCCCEEEEEECCCC-cEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeee
Confidence            8999999999999999999999999999642 456677888999999999999999999999999999999999999999


Q ss_pred             EEcCccEEEEEEcCCCcEEEEEECCC--------------eEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEc
Q psy17610        291 MILPSMIMSAAYHPSEVQLITCSTNK--------------MIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGG  356 (515)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~l~~~~~~~--------------~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~  356 (515)
                      +.....+..++|+|+++++++++.++              .+++||..+++.+..+..+. ..|.+++|+|++++|++++
T Consensus       256 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~s~~  334 (369)
T 3zwl_B          256 YETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHF-GPLNTVAISPQGTSYASGG  334 (369)
T ss_dssp             EECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCS-SCEEEEEECTTSSEEEEEE
T ss_pred             ecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheeccc-CcEEEEEECCCCCEEEEEc
Confidence            99889999999999999999999988              89999999999999998876 8999999999999999999


Q ss_pred             CCCeEEEEEccCCeeee
Q psy17610        357 ADQIVKMWMYREGVPCF  373 (515)
Q Consensus       357 ~dg~i~i~d~~~~~~~~  373 (515)
                      .||.|++|+++.+....
T Consensus       335 ~dg~v~iw~~~~~~~~~  351 (369)
T 3zwl_B          335 EDGFIRLHHFEKSYFDF  351 (369)
T ss_dssp             TTSEEEEEEECHHHHTC
T ss_pred             CCCeEEEEECccccchh
Confidence            99999999998764433

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=100.00  E-value=1.1e-41  Score=323.93  Aligned_cols=319  Identities=19%  Similarity=0.343  Sum_probs=281.0

Q ss_pred             EEEecCCCcE-EEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeC
Q psy17610         75 LYLLKDDSGI-SSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSV  153 (515)
Q Consensus        75 ~~~~~~~~~v-~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~  153 (515)
                      ..+.+|.+.| +++  ++++++|++|+.||.|++||+.+++ ....+.+|.+.|.+++|+  +..+++++.|++|++||+
T Consensus       112 ~~l~~h~~~v~~~~--~~~g~~l~sg~~dg~i~vwd~~~~~-~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~  186 (445)
T 2ovr_B          112 KVLKGHDDHVITCL--QFCGNRIVSGSDDNTLKVWSAVTGK-CLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNA  186 (445)
T ss_dssp             EEEECSTTSCEEEE--EEETTEEEEEETTSCEEEEETTTCC-EEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEET
T ss_pred             EEecccCCCcEEEE--EEcCCEEEEEECCCcEEEEECCCCc-EEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEEC
Confidence            4567898875 554  4568999999999999999999965 455667899999999998  459999999999999999


Q ss_pred             CCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcE
Q psy17610        154 RTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQV  233 (515)
Q Consensus       154 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i  233 (515)
                      .+++.+..+.+|...|.++.|+  ++.+++++.||.|++||+.+++....+ .+|...|.+++|  +++++++++.||.|
T Consensus       187 ~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~-~~~~~~v~~~~~--~~~~l~~~~~dg~i  261 (445)
T 2ovr_B          187 ETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVL-MGHVAAVRCVQY--DGRRVVSGAYDFMV  261 (445)
T ss_dssp             TTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEE-ECCSSCEEEEEE--CSSCEEEEETTSCE
T ss_pred             CcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEE-cCCcccEEEEEE--CCCEEEEEcCCCEE
Confidence            9999999999999999999985  678999999999999999999998887 689999999999  67899999999999


Q ss_pred             EEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC-ccEEEEEEcCCCcEEEEE
Q psy17610        234 RIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP-SMIMSAAYHPSEVQLITC  312 (515)
Q Consensus       234 ~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~  312 (515)
                      ++||++  .......+.+|...|.++.|  ++.++++++.|+.|++||+++++....+..+ ..+.++.+  ++++++++
T Consensus       262 ~iwd~~--~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~  335 (445)
T 2ovr_B          262 KVWDPE--TETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSG  335 (445)
T ss_dssp             EEEEGG--GTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEE--ETTEEEEE
T ss_pred             EEEECC--CCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEE--eCCEEEEE
Confidence            999995  45667778899999999998  7899999999999999999999988877654 35666665  56799999


Q ss_pred             ECCCeEEEEeCCCCceEEEEecC--CCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeec-----cCCCCCeeEE
Q psy17610        313 STNKMIDYWETCDGSIIRSLEGS--DVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVG-----IGHAASITKI  385 (515)
Q Consensus       313 ~~~~~i~~~d~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-----~~~~~~i~~~  385 (515)
                      +.|+.|++||+++++.+..+..+  +...+.+++|+  ++++++|+.||.|++||+.+++.+..+     .+|...|.++
T Consensus       336 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~  413 (445)
T 2ovr_B          336 NADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRI  413 (445)
T ss_dssp             ETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEE
T ss_pred             eCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEE
Confidence            99999999999999999998862  34789999996  579999999999999999999888777     5788999999


Q ss_pred             EECCCCcEEEEEeCCCc----EEEEeCCCC
Q psy17610        386 KISPDKKVIVSVSADGG----IFLWTFPEL  411 (515)
Q Consensus       386 ~~~~~~~~l~~~~~dg~----i~iw~~~~~  411 (515)
                      +|+|++.++++++.||+    +.+||+...
T Consensus       414 ~~s~~~~~la~~~~dg~~~~~l~v~df~~~  443 (445)
T 2ovr_B          414 RASNTKLVCAVGSRNGTEETKLLVLDFDVD  443 (445)
T ss_dssp             EECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred             EecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence            99999999999999998    999998753

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=100.00  E-value=6.1e-42  Score=314.02  Aligned_cols=303  Identities=15%  Similarity=0.254  Sum_probs=256.0

Q ss_pred             EEEEECCCC-ceeEEeeccCccCeEEEEeCCC-CcEEEEEecCCcEEEEeCCCCc-----eeEEEEecCeEEEEEEEeeC
Q psy17610        105 IFLIDMNSG-FTLTLVNTCHTSAIYDLQFPVN-FSSVFATCSKNDIRIWSVRTLN-----ELLRISVMNMICACIVFTYD  177 (515)
Q Consensus       105 i~iw~~~~~-~~~~~~~~~h~~~v~~~~~~~~-~~~l~~~~~d~~i~iw~~~~~~-----~~~~~~~~~~~v~~~~~~~~  177 (515)
                      ++++...+. ..+...++||.+.|++++|+|+ +++|++++.|++|+|||+.+.+     +...+.+|...|.+++|+|+
T Consensus        18 ~~~~~~~~~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~d   97 (340)
T 4aow_A           18 LYFQSMMTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSD   97 (340)
T ss_dssp             --------CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTT
T ss_pred             EEEEEccCCceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCC
Confidence            444444332 2455578999999999999998 5789999999999999997654     45667889999999999999


Q ss_pred             CCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceE
Q psy17610        178 GKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVS  257 (515)
Q Consensus       178 ~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~  257 (515)
                      +++|++++.|+.|++|+.......... ..+...+....+++++++|++++.|+.+++||... .........+|...+.
T Consensus        98 g~~l~s~~~d~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~-~~~~~~~~~~~~~~v~  175 (340)
T 4aow_A           98 GQFALSGSWDGTLRLWDLTTGTTTRRF-VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLG-VCKYTVQDESHSEWVS  175 (340)
T ss_dssp             SSEEEEEETTSEEEEEETTTTEEEEEE-ECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTS-CEEEEECSSSCSSCEE
T ss_pred             CCEEEEEcccccceEEeecccceeeee-cCCCCceeEEEEeecCccceeecCCCeEEEEEeCC-CceEEEEeccccCccc
Confidence            999999999999999999998887776 57888899999999999999999999999999863 3444556778999999


Q ss_pred             EEEEecCC--CEEEEEeCCCcEEEEEcccceEEEEEEc-CccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEec
Q psy17610        258 VIQIKSDS--KEAMSASTDGTCVLWDLIKSTRLIIMIL-PSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEG  334 (515)
Q Consensus       258 ~~~~~~~~--~~l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~  334 (515)
                      .++|++++  ..+++++.|+.|++||+++++....+.. ...+.+++|+|++++|++++.|+.|++||+++.+.+..+..
T Consensus       176 ~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~  255 (340)
T 4aow_A          176 CVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG  255 (340)
T ss_dssp             EEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred             ceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecC
Confidence            99998764  5688999999999999999988887764 45899999999999999999999999999999999998887


Q ss_pred             CCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeec---------cCCCCCeeEEEECCCCcEEEEEeCCCcEEE
Q psy17610        335 SDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVG---------IGHAASITKIKISPDKKVIVSVSADGGIFL  405 (515)
Q Consensus       335 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~---------~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i  405 (515)
                      +  ..+.++.|+|++.++ +++.|+.|++||++++..+..+         .+|...|++++|+|++++|++++.||.|++
T Consensus       256 ~--~~v~~~~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~i  332 (340)
T 4aow_A          256 G--DIINALCFSPNRYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV  332 (340)
T ss_dssp             S--SCEEEEEECSSSSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred             C--ceEEeeecCCCCcee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEE
Confidence            6  689999999988755 5556899999999887665544         368899999999999999999999999999


Q ss_pred             EeCCCCc
Q psy17610        406 WTFPELE  412 (515)
Q Consensus       406 w~~~~~~  412 (515)
                      ||+.++.
T Consensus       333 W~~~tGt  339 (340)
T 4aow_A          333 WQVTIGT  339 (340)
T ss_dssp             EEEEC--
T ss_pred             EeCCCcC
Confidence            9987653

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2e-43  Score=335.26  Aligned_cols=360  Identities=13%  Similarity=0.172  Sum_probs=273.8

Q ss_pred             EEEE-ecCCCcEEEEEEec-CCCEEEEEecCceEEEEECCC---CceeE-EeeccCccCeEEEEeCCCCcEEEEEecCCc
Q psy17610         74 ALYL-LKDDSGISSLQYNP-VNNKVFVGTVNCEIFLIDMNS---GFTLT-LVNTCHTSAIYDLQFPVNFSSVFATCSKND  147 (515)
Q Consensus        74 ~~~~-~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~iw~~~~---~~~~~-~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~  147 (515)
                      ...+ .+|.+.|++++|+| ++++||+|+.||.|++||+.+   +.... ....+|..+|.+++|+|+++.|++++.|+.
T Consensus        55 ~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~  134 (437)
T 3gre_A           55 IATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQ  134 (437)
T ss_dssp             EEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSE
T ss_pred             EeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCE
Confidence            3344 67899999999999 999999999999999999876   33221 112249999999999999999999999999


Q ss_pred             EEEEeCC---CCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEE--EcCCCC
Q psy17610        148 IRIWSVR---TLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALA--ITQDGT  222 (515)
Q Consensus       148 i~iw~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~  222 (515)
                      |++||++   +++.+..+..+  .+..+.|+|++                             +...+.++.  +++++.
T Consensus       135 i~vwd~~~~~~~~~~~~~~~~--~i~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~  183 (437)
T 3gre_A          135 IIVLKVNHYQQESEVKFLNCE--CIRKINLKNFG-----------------------------KNEYAVRMRAFVNEEKS  183 (437)
T ss_dssp             EEEEEEEEEEETTEEEEEEEE--EEEEEEGGGGS-----------------------------SCCCEEEEEEEECSSCE
T ss_pred             EEEEEeccccCCceeeccccc--eeEEEEccCcc-----------------------------cccCceEEEEEEcCCCC
Confidence            9999995   66666655544  56666666653                             334455555  668999


Q ss_pred             EEEEecCCCcEEEEEccCCceeeEEeecc--ccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEE--cCccEE
Q psy17610        223 RLLSGGGEGQVRIWKLTRESQSLQCVLKE--HTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMI--LPSMIM  298 (515)
Q Consensus       223 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~--~~~~~~  298 (515)
                      +|++++.|+.|++||++.  ......+.+  |...|.+++|+|+++++++++.||.|++||+++++.+..+.  +...+.
T Consensus       184 ~l~~~~~d~~i~iwd~~~--~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~  261 (437)
T 3gre_A          184 LLVALTNLSRVIIFDIRT--LERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPIT  261 (437)
T ss_dssp             EEEEEETTSEEEEEETTT--CCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEE
T ss_pred             EEEEEeCCCeEEEEeCCC--CeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceE
Confidence            999999999999999954  445566666  89999999999999999999999999999999999888774  455799


Q ss_pred             EEEEcC----CCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeee
Q psy17610        299 SAAYHP----SEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFV  374 (515)
Q Consensus       299 ~~~~~~----~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~  374 (515)
                      +++++|    ++.++++++.|+.|++||+++++.+..+..+. ..+..+.|+|+++.+    .+.              .
T Consensus       262 ~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l----~~~--------------~  322 (437)
T 3gre_A          262 HVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSD-EQPSMEHFLPIEKGL----EEL--------------N  322 (437)
T ss_dssp             EEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSS-SCCCGGGGSCBCSSG----GGC--------------C
T ss_pred             EEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCC-CCCccceeccccccc----ccc--------------e
Confidence            996654    67899999999999999999999999999876 677778888887655    111              1


Q ss_pred             ccC--CCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccC
Q psy17610        375 GIG--HAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPS  452 (515)
Q Consensus       375 ~~~--~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~  452 (515)
                      +.+  |...|++++|+ ++++|++++.|+.|++||+...+.......        .         ......+....+++.
T Consensus       323 ~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~--------~---------~~~~~~~~~~~~~~~  384 (437)
T 3gre_A          323 FCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVIS--------P---------SRFSDVFIPTQVTAN  384 (437)
T ss_dssp             CCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEEC--------C-----------CCCEEEEEEEETT
T ss_pred             ecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEec--------c---------cccCceEEEEEeecc
Confidence            334  88999999999 789999999999999999987642111000        0         001223555666666


Q ss_pred             CcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCC--CcEEEEeecCCeEEEEE
Q psy17610        453 EVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDD--GKYFLTGGADQIVKICL  512 (515)
Q Consensus       453 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~s~~~dg~v~iw~  512 (515)
                      ..+++..        |+...+........|. ..|++++|+++  +.+|++|+.||.|+||+
T Consensus       385 ~~~~~~~--------~~~~~~~~~~~~~~h~-~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~  437 (437)
T 3gre_A          385 LTMLLRK--------MKRTSTHSVDDSLYHH-DIINSISTCEVDETPLLVACDNSGLIGIFQ  437 (437)
T ss_dssp             EEEEEEE--------CC-------------C-CCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred             eEEEEEe--------cccccccccCcccccc-cceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence            6655544        3444445555556666 99999999998  88999999999999995

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.6e-41  Score=313.62  Aligned_cols=291  Identities=15%  Similarity=0.164  Sum_probs=265.1

Q ss_pred             EEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecC
Q psy17610        117 TLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQ  196 (515)
Q Consensus       117 ~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~  196 (515)
                      ...+.+|.++|++++|+|++++|++++.|+.|++||+.+++.+..+..|...|.+++|+|++++|++++.||.|++||+.
T Consensus        25 ~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~  104 (369)
T 3zwl_B           25 AIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVS  104 (369)
T ss_dssp             EEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETT
T ss_pred             cEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence            34577899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCceEEEecCCCCCCeEEEEEcCCCCEEEEecCC-----CcEEEEEccCCce---------eeEEeeccccC--ceEEEE
Q psy17610        197 SGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGE-----GQVRIWKLTRESQ---------SLQCVLKEHTS--SVSVIQ  260 (515)
Q Consensus       197 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iw~~~~~~~---------~~~~~~~~~~~--~v~~~~  260 (515)
                      +++....+.  +...+.+++|+|+++++++++.+     +.|++||+.....         .....+..|..  .+.+++
T Consensus       105 ~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (369)
T 3zwl_B          105 NGQCVATWK--SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAG  182 (369)
T ss_dssp             TCCEEEEEE--CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEE
T ss_pred             CCcEEEEee--cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEE
Confidence            999988873  88899999999999999999998     9999999964432         12334445555  899999


Q ss_pred             EecCCCEEEEEeCCCcEEEEEccc-ceEEEEEE-cCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCc
Q psy17610        261 IKSDSKEAMSASTDGTCVLWDLIK-STRLIIMI-LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVA  338 (515)
Q Consensus       261 ~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~  338 (515)
                      |+|+++++++++.||.|++||+++ .+....+. +...+.+++|+|++++|++++.++.|++||+++++.+..+...  .
T Consensus       183 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~--~  260 (369)
T 3zwl_B          183 WSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETD--C  260 (369)
T ss_dssp             ECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECS--S
T ss_pred             EcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCC--C
Confidence            999999999999999999999998 67776666 4568999999999999999999999999999999999988843  7


Q ss_pred             cEEEEEEcCCCCEEEEEcCCC--------------eEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEE
Q psy17610        339 AVNCVDFVDDGKYFLTGGADQ--------------IVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIF  404 (515)
Q Consensus       339 ~i~~~~~~~~~~~l~~~~~dg--------------~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~  404 (515)
                      .+.+++|+|+++++++++.++              .+++||..+++.+..+.+|...|++++|+|++++|++++.||.|+
T Consensus       261 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~  340 (369)
T 3zwl_B          261 PLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIR  340 (369)
T ss_dssp             CEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred             CceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEE
Confidence            899999999999999999888              899999999999999999999999999999999999999999999


Q ss_pred             EEeCCCC
Q psy17610        405 LWTFPEL  411 (515)
Q Consensus       405 iw~~~~~  411 (515)
                      +|++...
T Consensus       341 iw~~~~~  347 (369)
T 3zwl_B          341 LHHFEKS  347 (369)
T ss_dssp             EEEECHH
T ss_pred             EEECccc
Confidence            9998764

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=100.00  E-value=7.5e-42  Score=342.77  Aligned_cols=290  Identities=18%  Similarity=0.291  Sum_probs=254.9

Q ss_pred             EEEecCCCcEEEEEEecCC-CEEEEEecCceEEEEECCCCc----eeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEE
Q psy17610         75 LYLLKDDSGISSLQYNPVN-NKVFVGTVNCEIFLIDMNSGF----TLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIR  149 (515)
Q Consensus        75 ~~~~~~~~~v~~~~~s~~~-~~l~~~~~d~~i~iw~~~~~~----~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~  149 (515)
                      -.+.+|.+.|++++|+|++ ++|++|+.|++|++|++.++.    .....+.+|...|.+++|+|++++|++++.|++|+
T Consensus       376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~  455 (694)
T 3dm0_A          376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELR  455 (694)
T ss_dssp             EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred             hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEE
Confidence            4577999999999999864 799999999999999997632    23456778999999999999999999999999999


Q ss_pred             EEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEe--cCCCCCCeEEEEEcCCC--CEEE
Q psy17610        150 IWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFII--PNAHNRGVTALAITQDG--TRLL  225 (515)
Q Consensus       150 iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~--~~l~  225 (515)
                      |||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||..........  ..+|...|.+++|+|++  ..++
T Consensus       456 vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~  535 (694)
T 3dm0_A          456 LWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIV  535 (694)
T ss_dssp             EEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEE
T ss_pred             EEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEE
Confidence            9999999999999999999999999999999999999999999998765443322  14688899999999986  6899


Q ss_pred             EecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCC
Q psy17610        226 SGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPS  305 (515)
Q Consensus       226 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  305 (515)
                      +++.|+.|++||++  .......+.+|...|.+++|+|+++++++++.||.|++||+++++.+..+..+..+.+++|+|+
T Consensus       536 s~s~d~~v~vwd~~--~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~  613 (694)
T 3dm0_A          536 SASWDKTVKVWNLS--NCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPN  613 (694)
T ss_dssp             EEETTSCEEEEETT--TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSSCEEEEEECSS
T ss_pred             EEeCCCeEEEEECC--CCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCCcEEEEEEcCC
Confidence            99999999999995  4556777899999999999999999999999999999999999999888888889999999999


Q ss_pred             CcEEEEEECCCeEEEEeCCCCceEEEEecCCC------------------ccEEEEEEcCCCCEEEEEcCCCeEEEEEcc
Q psy17610        306 EVQLITCSTNKMIDYWETCDGSIIRSLEGSDV------------------AAVNCVDFVDDGKYFLTGGADQIVKMWMYR  367 (515)
Q Consensus       306 ~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~------------------~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~  367 (515)
                      +.+++++. ++.|++||+++++.+..+..+..                  ..+++++|+|+|++|++|+.||.|++|++.
T Consensus       614 ~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~  692 (694)
T 3dm0_A          614 RYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG  692 (694)
T ss_dssp             SSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred             CcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence            98887765 55699999999998877753221                  136889999999999999999999999985

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=100.00  E-value=5.3e-41  Score=321.26  Aligned_cols=320  Identities=17%  Similarity=0.261  Sum_probs=274.2

Q ss_pred             EEEEEecCCCcE-EEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEE
Q psy17610         73 TALYLLKDDSGI-SSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIW  151 (515)
Q Consensus        73 ~~~~~~~~~~~v-~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw  151 (515)
                      ....+.+|...| +++++  ++++|++|+.||.|++||+.+++ ....+.+|.+.|.+++|+|++ .+++++.|++|++|
T Consensus       113 ~~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~-~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vw  188 (464)
T 3v7d_B          113 QRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKK-FLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVW  188 (464)
T ss_dssp             EEEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTE-EEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEE
T ss_pred             ceEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCc-EEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEE
Confidence            445677898874 66666  46899999999999999999964 555667899999999999997 99999999999999


Q ss_pred             eCCCCceeEEEEecCeEEEEEEEee--CCCEEEEEeCCCeEEEEecCCCceE----------------------EEecCC
Q psy17610        152 SVRTLNELLRISVMNMICACIVFTY--DGKAILSGWNDGFIRCFTPQSGKLK----------------------FIIPNA  207 (515)
Q Consensus       152 ~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~~~~~~~~~~~----------------------~~~~~~  207 (515)
                      |+++++.+..+.+|...|.+++|++  +++++++++.|+.|++||+.+++..                      .....+
T Consensus       189 d~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (464)
T 3v7d_B          189 DIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRG  268 (464)
T ss_dssp             ETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECC
T ss_pred             ECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccC
Confidence            9999999999999999999999995  7789999999999999999877532                      122367


Q ss_pred             CCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceE
Q psy17610        208 HNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTR  287 (515)
Q Consensus       208 ~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~  287 (515)
                      |...+.++  +++++++++++.|+.|++||+.  .......+.+|...|.+++|+|+++++++++.||.|++||+++++.
T Consensus       269 ~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~  344 (464)
T 3v7d_B          269 HMASVRTV--SGHGNIVVSGSYDNTLIVWDVA--QMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGEL  344 (464)
T ss_dssp             CSSCEEEE--EEETTEEEEEETTSCEEEEETT--TTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEE
T ss_pred             ccceEEEE--cCCCCEEEEEeCCCeEEEEECC--CCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcE
Confidence            88888877  5678899999999999999995  4566777889999999999999999999999999999999999998


Q ss_pred             EEEEEc-CccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEc
Q psy17610        288 LIIMIL-PSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMY  366 (515)
Q Consensus       288 ~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~  366 (515)
                      +..+.. ...+.++.++  +.++++++.|+.|++||+.+++........  ..+..++|+|+++++++++ ||.|++||+
T Consensus       345 ~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~-dg~i~iwd~  419 (464)
T 3v7d_B          345 MYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYHHT--NLSAITTFYVSDNILVSGS-ENQFNIYNL  419 (464)
T ss_dssp             EEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEECT--TCCCEEEEEECSSEEEEEE-TTEEEEEET
T ss_pred             EEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeecCC--CCccEEEEEeCCCEEEEec-CCeEEEEEC
Confidence            888864 4578899987  589999999999999999998877666533  5677889999999999998 899999999


Q ss_pred             cCCeeeee-ccCCCCCeeEEEECCCCcEEEEEeCCCcEEEE
Q psy17610        367 REGVPCFV-GIGHAASITKIKISPDKKVIVSVSADGGIFLW  406 (515)
Q Consensus       367 ~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw  406 (515)
                      ++++.+.. ...|...|.+++|+ +..++++++.||.+.+|
T Consensus       420 ~~g~~~~~~~~~~~~~v~~v~~~-~~~l~~~~~~~g~~~i~  459 (464)
T 3v7d_B          420 RSGKLVHANILKDADQIWSVNFK-GKTLVAAVEKDGQSFLE  459 (464)
T ss_dssp             TTCCEEESCTTTTCSEEEEEEEE-TTEEEEEEEETTEEEEE
T ss_pred             CCCcEEehhhccCCCcEEEEEec-CCEEEEEEEeCCeEEEE
Confidence            99998875 67889999999997 44556666667766555

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=100.00  E-value=3.1e-41  Score=320.74  Aligned_cols=325  Identities=18%  Similarity=0.329  Sum_probs=278.6

Q ss_pred             CCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEE
Q psy17610        155 TLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVR  234 (515)
Q Consensus       155 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~  234 (515)
                      ..+....+.+|...+.. ++.+++++|++++.||.|++||+.+++....+ .+|...|.+++|+  ++.+++|+.||.|+
T Consensus       107 ~~~~~~~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~-~~h~~~v~~~~~~--~~~l~s~~~dg~i~  182 (445)
T 2ovr_B          107 ELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTL-VGHTGGVWSSQMR--DNIIISGSTDRTLK  182 (445)
T ss_dssp             CCCCCEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEEC-CCCSSCEEEEEEE--TTEEEEEETTSCEE
T ss_pred             CcceeEEecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCcEEEEE-cCCCCCEEEEEec--CCEEEEEeCCCeEE
Confidence            34456678888876433 35667999999999999999999999998888 6999999999997  56999999999999


Q ss_pred             EEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEc-CccEEEEEEcCCCcEEEEEE
Q psy17610        235 IWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMIL-PSMIMSAAYHPSEVQLITCS  313 (515)
Q Consensus       235 iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~  313 (515)
                      +||+.  +......+.+|...|.++.++  ++.+++++.||.|++||+.+++....+.. ...+.++.+  ++..+++++
T Consensus       183 vwd~~--~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~  256 (445)
T 2ovr_B          183 VWNAE--TGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGA  256 (445)
T ss_dssp             EEETT--TTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEE
T ss_pred             EEECC--cCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEc
Confidence            99995  456677888999999999985  57899999999999999999988877764 457888888  788999999


Q ss_pred             CCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcE
Q psy17610        314 TNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKV  393 (515)
Q Consensus       314 ~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~  393 (515)
                      .|+.|++||+++++.+..+..+. ..+.++.|  +++++++++.||.|++||+++++.+..+.+|...+.++.+  ++++
T Consensus       257 ~dg~i~iwd~~~~~~~~~~~~~~-~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~  331 (445)
T 2ovr_B          257 YDFMVKVWDPETETCLHTLQGHT-NRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNI  331 (445)
T ss_dssp             TTSCEEEEEGGGTEEEEEECCCS-SCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEE--ETTE
T ss_pred             CCCEEEEEECCCCcEeEEecCCC-CceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEE--eCCE
Confidence            99999999999999999998776 78999999  7889999999999999999999999999999999999888  4669


Q ss_pred             EEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCC
Q psy17610        394 IVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDG  473 (515)
Q Consensus       394 l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~  473 (515)
                      |++++.||.|++||+...+....        .         .....|...|.+++|+  +++|++++.||.|++||+.++
T Consensus       332 l~~~~~dg~i~vwd~~~~~~~~~--------~---------~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~  392 (445)
T 2ovr_B          332 LVSGNADSTVKIWDIKTGQCLQT--------L---------QGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTG  392 (445)
T ss_dssp             EEEEETTSCEEEEETTTCCEEEE--------E---------CSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTC
T ss_pred             EEEEeCCCeEEEEECCCCcEEEE--------E---------ccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCC
Confidence            99999999999999976431100        0         0011255679999995  689999999999999999999


Q ss_pred             eeeeee-----cccccceEEEEEEcCCCcEEEEeecCCe----EEEEEEe
Q psy17610        474 SIIRSL-----EGSDVAAVNCVDFVDDGKYFLTGGADQI----VKICLYI  514 (515)
Q Consensus       474 ~~~~~~-----~~~~~~~v~~~~~s~~~~~l~s~~~dg~----v~iw~~~  514 (515)
                      +.+..+     .++. ..|.+++|+|++.+|++|+.||+    |.+|||-
T Consensus       393 ~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~  441 (445)
T 2ovr_B          393 EFIRNLVTLESGGSG-GVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFD  441 (445)
T ss_dssp             CEEEEEEECTTGGGT-CEEEEEEECSSEEEEEEECSSSSSCCEEEEEECC
T ss_pred             ceeeeeeccccCCCC-ceEEEEEecCCEEEEEEcccCCCCccEEEEEECC
Confidence            998888     3444 89999999999999999999998    9999973

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=100.00  E-value=6e-41  Score=320.86  Aligned_cols=321  Identities=18%  Similarity=0.326  Sum_probs=268.4

Q ss_pred             eeEEEEecCeEE-EEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEE
Q psy17610        158 ELLRISVMNMIC-ACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIW  236 (515)
Q Consensus       158 ~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw  236 (515)
                      ....+.+|...+ .++.+  ++++|++|+.||.|++||+.+++....+ .+|...|.+++|+|++ .+++|+.||.|++|
T Consensus       113 ~~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~-~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vw  188 (464)
T 3v7d_B          113 QRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQL-SGHDGGVWALKYAHGG-ILVSGSTDRTVRVW  188 (464)
T ss_dssp             EEEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEE-CCCSSCEEEEEECSTT-EEEEEETTSCEEEE
T ss_pred             ceEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEE-eCCCcCEEEEEEcCCC-EEEEEeCCCCEEEE
Confidence            456778888774 55554  6789999999999999999999999888 6999999999999988 89999999999999


Q ss_pred             EccCCceeeEEeeccccCceEEEEEe--cCCCEEEEEeCCCcEEEEEcccceEEE-----------------------EE
Q psy17610        237 KLTRESQSLQCVLKEHTSSVSVIQIK--SDSKEAMSASTDGTCVLWDLIKSTRLI-----------------------IM  291 (515)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~d~~i~iwd~~~~~~~~-----------------------~~  291 (515)
                      |+.  +......+.+|...|.+++|+  +++.++++++.|+.|++||+++.....                       ..
T Consensus       189 d~~--~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (464)
T 3v7d_B          189 DIK--KGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVL  266 (464)
T ss_dssp             ETT--TTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEE
T ss_pred             ECC--CCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEc
Confidence            995  455677888999999999998  577899999999999999998765321                       12


Q ss_pred             E-cCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCe
Q psy17610        292 I-LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGV  370 (515)
Q Consensus       292 ~-~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~  370 (515)
                      . +...+.++  +++++++++++.|+.|++||+++++.+..+..+. ..+.+++|+|+++++++|+.||.|++||+++++
T Consensus       267 ~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~  343 (464)
T 3v7d_B          267 RGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHT-DRIYSTIYDHERKRCISASMDTTIRIWDLENGE  343 (464)
T ss_dssp             CCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCS-SCEEEEEEETTTTEEEEEETTSCEEEEETTTTE
T ss_pred             cCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCC-CCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc
Confidence            1 22344444  6889999999999999999999999999998776 899999999999999999999999999999999


Q ss_pred             eeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeec
Q psy17610        371 PCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYH  450 (515)
Q Consensus       371 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s  450 (515)
                      ++..+.+|...|.+++|+  +++|++++.||.|++||+.....                     .....+...+..++|+
T Consensus       344 ~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~---------------------~~~~~~~~~~~~~~~~  400 (464)
T 3v7d_B          344 LMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSR---------------------KFSYHHTNLSAITTFY  400 (464)
T ss_dssp             EEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCE---------------------EEEEECTTCCCEEEEE
T ss_pred             EEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCce---------------------eeeecCCCCccEEEEE
Confidence            999999999999999997  57999999999999999976431                     1111234557788999


Q ss_pred             cCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEEEEE
Q psy17610        451 PSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICL  512 (515)
Q Consensus       451 ~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~  512 (515)
                      |+++++++++ ||.|++||+.+++++......+...|.+++|+ +..++++++.||.+.+|-
T Consensus       401 ~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~-~~~l~~~~~~~g~~~i~~  460 (464)
T 3v7d_B          401 VSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFK-GKTLVAAVEKDGQSFLEI  460 (464)
T ss_dssp             ECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE-TTEEEEEEEETTEEEEEE
T ss_pred             eCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEec-CCEEEEEEEeCCeEEEEE
Confidence            9999999998 89999999999999987433334999999997 445566667777665543

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=100.00  E-value=8.6e-42  Score=320.04  Aligned_cols=291  Identities=14%  Similarity=0.122  Sum_probs=259.6

Q ss_pred             eEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCc------eeEEEEecCeEEEEEEEeeC----C---CEEE
Q psy17610        116 LTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLN------ELLRISVMNMICACIVFTYD----G---KAIL  182 (515)
Q Consensus       116 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~------~~~~~~~~~~~v~~~~~~~~----~---~~l~  182 (515)
                      ....+.+|.++|++++|+|  ++|++++.|+.|++||+.+++      .+..+..|...|.+++|+|+    +   ++|+
T Consensus         8 ~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~   85 (397)
T 1sq9_A            8 TANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVA   85 (397)
T ss_dssp             EEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEE
T ss_pred             hhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEE
Confidence            4556778999999999999  699999999999999999988      78889999999999999999    9   9999


Q ss_pred             EEeCCCeEEEEecCCCce-----EEEecCCC-----CCCeEEEEEc----CCCCE-EEEecCCCcEEEEEccC------C
Q psy17610        183 SGWNDGFIRCFTPQSGKL-----KFIIPNAH-----NRGVTALAIT----QDGTR-LLSGGGEGQVRIWKLTR------E  241 (515)
Q Consensus       183 ~~~~dg~i~~~~~~~~~~-----~~~~~~~~-----~~~v~~~~~~----~~~~~-l~~~~~d~~i~iw~~~~------~  241 (515)
                      +++.|+.|++|++.+++.     ...+ ..|     ...|.+++|+    |++++ |++++.||.|++||+..      .
T Consensus        86 s~~~dg~i~iw~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  164 (397)
T 1sq9_A           86 TTSFSGDLLFYRITREDETKKVIFEKL-DLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNS  164 (397)
T ss_dssp             EEETTSCEEEEEEEECTTTCCEEEEEE-CCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHH
T ss_pred             EEcCCCCEEEEEccCCcccccccceee-cccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccccc
Confidence            999999999999998886     6666 567     5899999999    99999 99999999999999975      2


Q ss_pred             ceee---EEee-------ccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEc-------CccEEEEEEcC
Q psy17610        242 SQSL---QCVL-------KEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMIL-------PSMIMSAAYHP  304 (515)
Q Consensus       242 ~~~~---~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-------~~~~~~~~~~~  304 (515)
                      ....   ...+       ..|...|.+++|+|++ .+++++.|+.|++||+++++.+..+..       ...+.+++|+|
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~  243 (397)
T 1sq9_A          165 LTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSP  243 (397)
T ss_dssp             TTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECS
T ss_pred             ceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECC
Confidence            2111   1134       4588999999999999 999999999999999999999888886       67899999999


Q ss_pred             CCcEEEEEECC---CeEEEEeCCCCceEEEEec-------------CCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccC
Q psy17610        305 SEVQLITCSTN---KMIDYWETCDGSIIRSLEG-------------SDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYRE  368 (515)
Q Consensus       305 ~~~~l~~~~~~---~~i~~~d~~~~~~~~~~~~-------------~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~  368 (515)
                      +++++++++.+   +.|++||+++++.+..+..             +. ..+.+++|+|++++|++++.||.|++||+++
T Consensus       244 ~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~  322 (397)
T 1sq9_A          244 QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHS-SWVMSLSFNDSGETLCSAGWDGKLRFWDVKT  322 (397)
T ss_dssp             STTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBS-SCEEEEEECSSSSEEEEEETTSEEEEEETTT
T ss_pred             CCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccC-CcEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence            99999999999   9999999999999999887             44 8999999999999999999999999999999


Q ss_pred             Ceeeeecc------CC---------------CCCeeEEEECCCC----------cEEEEEeCCCcEEEEeCCCC
Q psy17610        369 GVPCFVGI------GH---------------AASITKIKISPDK----------KVIVSVSADGGIFLWTFPEL  411 (515)
Q Consensus       369 ~~~~~~~~------~~---------------~~~i~~~~~~~~~----------~~l~~~~~dg~i~iw~~~~~  411 (515)
                      ++.+..+.      +|               ...|++++|+|++          ++|++++.||.|++|++..+
T Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g  396 (397)
T 1sq9_A          323 KERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG  396 (397)
T ss_dssp             TEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred             CceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence            99999988      78               9999999999998          79999999999999998653

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.9e-41  Score=303.27  Aligned_cols=290  Identities=20%  Similarity=0.312  Sum_probs=257.4

Q ss_pred             ECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCC
Q psy17610        109 DMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDG  188 (515)
Q Consensus       109 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg  188 (515)
                      |..++.++...+.+|.+.|.+++| |++++|++++.|+.|++||+.+++....+..|...|.+++|+|++++|++++.||
T Consensus         3 d~~~~~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg   81 (313)
T 3odt_A            3 DPFTGYQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDT   81 (313)
T ss_dssp             --CCCCEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTS
T ss_pred             CccccHHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCC
Confidence            445556777888999999999999 8999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEEEecCCC---ceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEec-C
Q psy17610        189 FIRCFTPQSG---KLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKS-D  264 (515)
Q Consensus       189 ~i~~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~-~  264 (515)
                      .+++|++...   +....+ ..|...|.+++|  +++++++++.|+.|++||    .......+..|...+.++.+.| +
T Consensus        82 ~i~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d----~~~~~~~~~~~~~~v~~~~~~~~~  154 (313)
T 3odt_A           82 MINGVPLFATSGEDPLYTL-IGHQGNVCSLSF--QDGVVISGSWDKTAKVWK----EGSLVYNLQAHNASVWDAKVVSFS  154 (313)
T ss_dssp             CEEEEETTCCTTSCC-CEE-CCCSSCEEEEEE--ETTEEEEEETTSEEEEEE----TTEEEEEEECCSSCEEEEEEEETT
T ss_pred             eEEEEEeeecCCCCcccch-hhcccCEEEEEe--cCCEEEEEeCCCCEEEEc----CCcEEEecccCCCceeEEEEccCC
Confidence            9999998764   445555 689999999999  577999999999999999    2445667788999999999988 8


Q ss_pred             CCEEEEEeCCCcEEEEEcccceEEEEEE--cCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEE
Q psy17610        265 SKEAMSASTDGTCVLWDLIKSTRLIIMI--LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNC  342 (515)
Q Consensus       265 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~  342 (515)
                      ++.+++++.|+.|++||.  .+....+.  +...+.+++++|++. +++++.++.|++||+++++.+..+..+. ..+.+
T Consensus       155 ~~~l~~~~~d~~i~i~d~--~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~i~~  230 (313)
T 3odt_A          155 ENKFLTASADKTIKLWQN--DKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHE-SFVYC  230 (313)
T ss_dssp             TTEEEEEETTSCEEEEET--TEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCS-SCEEE
T ss_pred             CCEEEEEECCCCEEEEec--CceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCC-ceEEE
Confidence            999999999999999994  34444444  566899999999998 9999999999999999999999998776 89999


Q ss_pred             EEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCc
Q psy17610        343 VDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELE  412 (515)
Q Consensus       343 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  412 (515)
                      ++|+|++ .+++++.||.|++||+++++....+..|...|.+++|+|+++ +++++.||.|++|++...+
T Consensus       231 ~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~  298 (313)
T 3odt_A          231 IKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSR  298 (313)
T ss_dssp             EEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGG
T ss_pred             EEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCc
Confidence            9999999 588999999999999999999999999999999999999998 6678999999999998654

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=100.00  E-value=4e-41  Score=313.67  Aligned_cols=310  Identities=15%  Similarity=0.155  Sum_probs=249.1

Q ss_pred             EecCCCceEEEecCCCCCCeEEEEEcCCC-CEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEec-CCCEEEE
Q psy17610        193 FTPQSGKLKFIIPNAHNRGVTALAITQDG-TRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKS-DSKEAMS  270 (515)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~  270 (515)
                      +++...+....+ .+|...|.+++|+|++ ++|++|+.||.|++||+............+|...|.+++|+| +++++++
T Consensus        58 ~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s  136 (383)
T 3ei3_B           58 RSLKSYKLHRTA-SPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFV  136 (383)
T ss_dssp             HHHTTCEEEEEE-CCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEE
T ss_pred             ccccccceEEec-cCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEE
Confidence            334455556666 6899999999999998 999999999999999997655555544557999999999999 7899999


Q ss_pred             EeCCCcEEEEEcccceEEEEEEcC---ccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcC
Q psy17610        271 ASTDGTCVLWDLIKSTRLIIMILP---SMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVD  347 (515)
Q Consensus       271 ~~~d~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~  347 (515)
                      ++.|+.|++||++...........   ..+.+++|+|+++++++++.++.|++||+ +++.+..+..+. ..+.+++|+|
T Consensus       137 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~-~~v~~~~~~~  214 (383)
T 3ei3_B          137 SSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHK-AKVTHAEFNP  214 (383)
T ss_dssp             EETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSS-SCEEEEEECS
T ss_pred             EeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCC-CcEEEEEECC
Confidence            999999999999864443333333   56999999999999999999999999999 677888888776 8999999999


Q ss_pred             CCC-EEEEEcCCCeEEEEEccC----CeeeeeccCCCCCeeEEEECC-CCcEEEEEeCCCcEEEEeCCCCcCccCCCccc
Q psy17610        348 DGK-YFLTGGADQIVKMWMYRE----GVPCFVGIGHAASITKIKISP-DKKVIVSVSADGGIFLWTFPELEDDVGDSRSL  421 (515)
Q Consensus       348 ~~~-~l~~~~~dg~i~i~d~~~----~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~  421 (515)
                      +++ ++++++.|+.|++||+++    +..+..+ +|...|++++|+| ++++|++++.|+.|++||+..........   
T Consensus       215 ~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~---  290 (383)
T 3ei3_B          215 RCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQII---  290 (383)
T ss_dssp             SCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEE---
T ss_pred             CCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccc---
Confidence            999 999999999999999988    5566655 7999999999999 99999999999999999998764321110   


Q ss_pred             ceeeecccc-cccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccc-cceEEEEEEcCCCcEE
Q psy17610        422 SSKISRSTA-RSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSD-VAAVNCVDFVDDGKYF  499 (515)
Q Consensus       422 ~~~~~~~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l  499 (515)
                       ........ .............+..++|+|++++  +++.||.|++||+.+++++..+.++. ...+..++|+|++++|
T Consensus       291 -~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l  367 (383)
T 3ei3_B          291 -IHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVL  367 (383)
T ss_dssp             -ECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEE
T ss_pred             -cccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEE
Confidence             00000000 0000011112245667888888888  88899999999999999999998753 3667778999999999


Q ss_pred             EEeecCCeEEEEEE
Q psy17610        500 LTGGADQIVKICLY  513 (515)
Q Consensus       500 ~s~~~dg~v~iw~~  513 (515)
                      ++++ ||.|++|++
T Consensus       368 ~s~s-d~~i~iw~~  380 (383)
T 3ei3_B          368 ASGM-GFNILIWNR  380 (383)
T ss_dssp             EEEE-TTEEEEEEC
T ss_pred             EEec-CCcEEEEec
Confidence            9997 999999996

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=100.00  E-value=1.7e-41  Score=318.03  Aligned_cols=292  Identities=13%  Similarity=0.116  Sum_probs=255.0

Q ss_pred             EEEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCc-----eeEEeeccCccCeEEEEeCCC----C---cEEEE
Q psy17610         74 ALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGF-----TLTLVNTCHTSAIYDLQFPVN----F---SSVFA  141 (515)
Q Consensus        74 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~-----~~~~~~~~h~~~v~~~~~~~~----~---~~l~~  141 (515)
                      ...+.+|.+.|++++|+|  ++|++|+.||.|++||+.++.     .....+.+|..+|.+++|+|+    +   ++|++
T Consensus         9 ~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s   86 (397)
T 1sq9_A            9 ANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVAT   86 (397)
T ss_dssp             EEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEE
T ss_pred             hhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEE
Confidence            344568999999999998  899999999999999999865     244555679999999999999    9   99999


Q ss_pred             EecCCcEEEEeCCCCce-----eEEEEec-----CeEEEEEEEe----eCCCE-EEEEeCCCeEEEEecCC------Cce
Q psy17610        142 TCSKNDIRIWSVRTLNE-----LLRISVM-----NMICACIVFT----YDGKA-ILSGWNDGFIRCFTPQS------GKL  200 (515)
Q Consensus       142 ~~~d~~i~iw~~~~~~~-----~~~~~~~-----~~~v~~~~~~----~~~~~-l~~~~~dg~i~~~~~~~------~~~  200 (515)
                      ++.|+.|++||+.+++.     +..+..|     ...|.+++|+    |++++ |++++.||.|++||+.+      ++.
T Consensus        87 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  166 (397)
T 1sq9_A           87 TSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLT  166 (397)
T ss_dssp             EETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTT
T ss_pred             EcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccce
Confidence            99999999999998887     8888888     5899999999    99999 99999999999999988      554


Q ss_pred             EE-----Eec------CCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeecc---c---cCceEEEEEec
Q psy17610        201 KF-----IIP------NAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKE---H---TSSVSVIQIKS  263 (515)
Q Consensus       201 ~~-----~~~------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~---~---~~~v~~~~~~~  263 (515)
                      +.     .+.      ..|...|.+++|+|++ ++++++.|+.|++||++.  ......+..   |   ...|.+++|+|
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~--~~~~~~~~~~~~h~~~~~~i~~i~~~~  243 (397)
T 1sq9_A          167 LNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELST--LRPLYNFESQHSMINNSNSIRSVKFSP  243 (397)
T ss_dssp             TCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTT--TEEEEEEECCC---CCCCCEEEEEECS
T ss_pred             eeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCC--CceeEEEeccccccccCCccceEEECC
Confidence            43     442      4588899999999999 999999999999999953  456667777   8   99999999999


Q ss_pred             CCCEEEEEeCC---CcEEEEEcccceEEEEEE--------------cCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCC
Q psy17610        264 DSKEAMSASTD---GTCVLWDLIKSTRLIIMI--------------LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDG  326 (515)
Q Consensus       264 ~~~~l~~~~~d---~~i~iwd~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~  326 (515)
                      ++++|++++.|   +.|++||+++++.+..+.              +...+.+++|+|++++|++++.|+.|++||++++
T Consensus       244 ~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~  323 (397)
T 1sq9_A          244 QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK  323 (397)
T ss_dssp             STTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT
T ss_pred             CCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence            99999999999   999999999998888876              4568999999999999999999999999999999


Q ss_pred             ceEEEEe------cC--------------CCccEEEEEEcCCC----------CEEEEEcCCCeEEEEEccCCe
Q psy17610        327 SIIRSLE------GS--------------DVAAVNCVDFVDDG----------KYFLTGGADQIVKMWMYREGV  370 (515)
Q Consensus       327 ~~~~~~~------~~--------------~~~~i~~~~~~~~~----------~~l~~~~~dg~i~i~d~~~~~  370 (515)
                      +.+..+.      .+              +...|.+++|+|++          ++|++++.||.|++|++++++
T Consensus       324 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~  397 (397)
T 1sq9_A          324 ERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK  397 (397)
T ss_dssp             EEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred             ceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence            9999998      55              14899999999998          799999999999999998763

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=100.00  E-value=2.7e-41  Score=314.83  Aligned_cols=295  Identities=15%  Similarity=0.164  Sum_probs=252.3

Q ss_pred             EECCCCceeEEeeccCccCeEEEEeCCCC-cEEEEEecCCcEEEEeCCCCceeEEEE--ecCeEEEEEEEee-CCCEEEE
Q psy17610        108 IDMNSGFTLTLVNTCHTSAIYDLQFPVNF-SSVFATCSKNDIRIWSVRTLNELLRIS--VMNMICACIVFTY-DGKAILS  183 (515)
Q Consensus       108 w~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~~~~~d~~i~iw~~~~~~~~~~~~--~~~~~v~~~~~~~-~~~~l~~  183 (515)
                      |++.+ ..+...+.+|...|.+++|+|++ ++|++++.|+.|++||+.+++....+.  +|...|.+++|+| ++++|++
T Consensus        58 ~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s  136 (383)
T 3ei3_B           58 RSLKS-YKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFV  136 (383)
T ss_dssp             HHHTT-CEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEE
T ss_pred             ccccc-cceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEE
Confidence            33344 34555677899999999999998 899999999999999999988877775  5899999999999 7899999


Q ss_pred             EeCCCeEEEEecCCCceEEEec--CCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEE
Q psy17610        184 GWNDGFIRCFTPQSGKLKFIIP--NAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQI  261 (515)
Q Consensus       184 ~~~dg~i~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~  261 (515)
                      ++.|+.|++||+++.. ...+.  ..|...|.+++|+|++++|++++.|+.|++||++   ......+.+|...|.+++|
T Consensus       137 ~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~---~~~~~~~~~h~~~v~~~~~  212 (383)
T 3ei3_B          137 SSIRGATTLRDFSGSV-IQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD---GHEIFKEKLHKAKVTHAEF  212 (383)
T ss_dssp             EETTTEEEEEETTSCE-EEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT---SCEEEEEECSSSCEEEEEE
T ss_pred             EeCCCEEEEEECCCCc-eEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC---CCEEEEeccCCCcEEEEEE
Confidence            9999999999999643 33332  2345889999999999999999999999999984   3456678889999999999


Q ss_pred             ecCCC-EEEEEeCCCcEEEEEccc----ceEEEEEEcCccEEEEEEcC-CCcEEEEEECCCeEEEEeCCCCceEEEEecC
Q psy17610        262 KSDSK-EAMSASTDGTCVLWDLIK----STRLIIMILPSMIMSAAYHP-SEVQLITCSTNKMIDYWETCDGSIIRSLEGS  335 (515)
Q Consensus       262 ~~~~~-~l~~~~~d~~i~iwd~~~----~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~  335 (515)
                      +|+++ ++++++.|+.|++||+++    +.....+.+...+.+++|+| ++.++++++.|+.|++||+++++....+..+
T Consensus       213 ~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~  292 (383)
T 3ei3_B          213 NPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIH  292 (383)
T ss_dssp             CSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEEC
T ss_pred             CCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccc
Confidence            99999 899999999999999998    67777778888999999999 9999999999999999999998877666543


Q ss_pred             C----------------CccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccC--CCCCeeEEEECCCCcEEEEE
Q psy17610        336 D----------------VAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIG--HAASITKIKISPDKKVIVSV  397 (515)
Q Consensus       336 ~----------------~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~  397 (515)
                      .                ...+..++++|++++  +++.||.|++||+.+++.+..+.+  |...+..++|+|++++|+++
T Consensus       293 ~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~  370 (383)
T 3ei3_B          293 PHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASG  370 (383)
T ss_dssp             CBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEE
T ss_pred             cccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEe
Confidence            2                134445677777776  778999999999999999988876  56778888999999999999


Q ss_pred             eCCCcEEEEeCCC
Q psy17610        398 SADGGIFLWTFPE  410 (515)
Q Consensus       398 ~~dg~i~iw~~~~  410 (515)
                      + |+.|++||+++
T Consensus       371 s-d~~i~iw~~~~  382 (383)
T 3ei3_B          371 M-GFNILIWNRED  382 (383)
T ss_dssp             E-TTEEEEEECC-
T ss_pred             c-CCcEEEEecCC
Confidence            7 99999999864

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=100.00  E-value=1.5e-41  Score=313.78  Aligned_cols=295  Identities=13%  Similarity=0.191  Sum_probs=251.2

Q ss_pred             ceeEEeeccCccCeEEEEeCCCCcEEEEEe-c---CCcEEEEeCCCCceeEEE-EecCeEEEEEEEeeC---CCEEEEEe
Q psy17610        114 FTLTLVNTCHTSAIYDLQFPVNFSSVFATC-S---KNDIRIWSVRTLNELLRI-SVMNMICACIVFTYD---GKAILSGW  185 (515)
Q Consensus       114 ~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-~---d~~i~iw~~~~~~~~~~~-~~~~~~v~~~~~~~~---~~~l~~~~  185 (515)
                      +.+..+..+|...|.+++|+|+++.+++++ .   |+.|++||+.+++..... ..|...|.+++|+|+   +++|++++
T Consensus         8 ~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~   87 (357)
T 3i2n_A            8 QIIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGD   87 (357)
T ss_dssp             CEEEEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEE
T ss_pred             HHhhhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEec
Confidence            455666778999999999999997776555 3   899999999998866543 378889999999998   69999999


Q ss_pred             CCCeEEEEecCCCc-eEEEecCCCCCCeEEEEE------cCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccC----
Q psy17610        186 NDGFIRCFTPQSGK-LKFIIPNAHNRGVTALAI------TQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTS----  254 (515)
Q Consensus       186 ~dg~i~~~~~~~~~-~~~~~~~~~~~~v~~~~~------~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~----  254 (515)
                      .||.|++||+.+++ ....+ .+|...|.++.|      +|++++|++++.|+.|++||+.... .....+..|..    
T Consensus        88 ~dg~i~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~-~~~~~~~~~~~~~~~  165 (357)
T 3i2n_A           88 FGGNLHIWNLEAPEMPVYSV-KGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKD-DPVANMEPVQGENKR  165 (357)
T ss_dssp             TTSCEEEECTTSCSSCSEEE-CCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCS-SCSEEECCCTTSCCC
T ss_pred             CCCeEEEEeCCCCCccEEEE-EecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCC-CcceeccccCCCCCC
Confidence            99999999999988 66666 689999999955      6789999999999999999997543 23444444443    


Q ss_pred             ceEEEE----EecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcC---CCcEEEEEECCCeEEEEeCCCCc
Q psy17610        255 SVSVIQ----IKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHP---SEVQLITCSTNKMIDYWETCDGS  327 (515)
Q Consensus       255 ~v~~~~----~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~~~~i~~~d~~~~~  327 (515)
                      .+.+++    |+|+++++++++.|+.|++||+++++......+...+.+++|+|   ++.++++++.++.|++||+++++
T Consensus       166 ~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~  245 (357)
T 3i2n_A          166 DCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQH  245 (357)
T ss_dssp             CEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEE
T ss_pred             ceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCC
Confidence            788888    67899999999999999999999999888888888999999999   99999999999999999998876


Q ss_pred             eEEEEe-----cCCCccEEEEEEcCCCC-EEEEEcCCCeEEEEEccCC-------------------eeeeeccCCCCCe
Q psy17610        328 IIRSLE-----GSDVAAVNCVDFVDDGK-YFLTGGADQIVKMWMYREG-------------------VPCFVGIGHAASI  382 (515)
Q Consensus       328 ~~~~~~-----~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~-------------------~~~~~~~~~~~~i  382 (515)
                      ....+.     .+. ..+.+++|+|+++ ++++++.||.|++||++.+                   +.+..+.+|...|
T Consensus       246 ~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v  324 (357)
T 3i2n_A          246 PTKGFASVSEKAHK-STVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPI  324 (357)
T ss_dssp             TTTEEEEEEEECCS-SCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCE
T ss_pred             cccceeeeccCCCc-CCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCe
Confidence            654443     554 8999999999998 8999999999999999754                   4567788999999


Q ss_pred             eEEEECCCCcEEE-EEeCCCcEEEEeCCCC
Q psy17610        383 TKIKISPDKKVIV-SVSADGGIFLWTFPEL  411 (515)
Q Consensus       383 ~~~~~~~~~~~l~-~~~~dg~i~iw~~~~~  411 (515)
                      ++++|+|++++|+ +++.|+.|++|++.+.
T Consensus       325 ~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~  354 (357)
T 3i2n_A          325 SSLDWSPDKRGLCVCSSFDQTVRVLIVTKL  354 (357)
T ss_dssp             EEEEECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred             eEEEEcCCCCeEEEEecCCCcEEEEECCCc
Confidence            9999999999998 8999999999998764

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=100.00  E-value=3.7e-41  Score=312.91  Aligned_cols=291  Identities=13%  Similarity=0.171  Sum_probs=253.6

Q ss_pred             eccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCc--eeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCC
Q psy17610        120 NTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLN--ELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQS  197 (515)
Q Consensus       120 ~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~  197 (515)
                      +..|.++|.+++|+|+++++++++.|+.|++||+.+++  .+..+..|...|.+++|+|++++|++++.||.|++||+++
T Consensus         4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~   83 (372)
T 1k8k_C            4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKG   83 (372)
T ss_dssp             EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEET
T ss_pred             ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCC
Confidence            34589999999999999999999999999999999887  8888999999999999999999999999999999999998


Q ss_pred             CceEEEe-cCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCce--eeEEeeccccCceEEEEEecCCCEEEEEeCC
Q psy17610        198 GKLKFII-PNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQ--SLQCVLKEHTSSVSVIQIKSDSKEAMSASTD  274 (515)
Q Consensus       198 ~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  274 (515)
                      ++..... ...|...|.+++|+|++++|++++.|+.|++||++....  ........|...|.+++|+|+++++++++.|
T Consensus        84 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d  163 (372)
T 1k8k_C           84 RTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD  163 (372)
T ss_dssp             TEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred             CeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCC
Confidence            8754443 257899999999999999999999999999999975542  1233346789999999999999999999999


Q ss_pred             CcEEEEEcc------------------cceEEEEEE-cCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecC
Q psy17610        275 GTCVLWDLI------------------KSTRLIIMI-LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGS  335 (515)
Q Consensus       275 ~~i~iwd~~------------------~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~  335 (515)
                      +.|++||++                  .++....+. +...+.+++|+|+++++++++.|+.|++||+++++.+..+..+
T Consensus       164 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~  243 (372)
T 1k8k_C          164 FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASE  243 (372)
T ss_dssp             SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECS
T ss_pred             CCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccC
Confidence            999999953                  566666664 4567999999999999999999999999999999999999877


Q ss_pred             CCccEEEEEEcCCCCEEEEEcCCCeEEEEEccC--Cee--------------------------------e------eec
Q psy17610        336 DVAAVNCVDFVDDGKYFLTGGADQIVKMWMYRE--GVP--------------------------------C------FVG  375 (515)
Q Consensus       336 ~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~--~~~--------------------------------~------~~~  375 (515)
                      . ..+.+++|+|++++++++ .|+.|++|++.+  ++.                                .      ..+
T Consensus       244 ~-~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (372)
T 1k8k_C          244 T-LPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGL  321 (372)
T ss_dssp             S-CCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCC
T ss_pred             C-CCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccc
Confidence            5 799999999999988888 899999999987  421                                0      222


Q ss_pred             -cCCCCCeeEEEEC-CCC---cEEEEEeCCCcEEEEeCCCCc
Q psy17610        376 -IGHAASITKIKIS-PDK---KVIVSVSADGGIFLWTFPELE  412 (515)
Q Consensus       376 -~~~~~~i~~~~~~-~~~---~~l~~~~~dg~i~iw~~~~~~  412 (515)
                       .+|...|++++|. +++   ++|++++.||.|++|++...+
T Consensus       322 ~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~  363 (372)
T 1k8k_C          322 DSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE  363 (372)
T ss_dssp             SSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHH
T ss_pred             cccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChh
Confidence             4899999999976 566   999999999999999987644

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=100.00  E-value=9.9e-41  Score=334.65  Aligned_cols=290  Identities=18%  Similarity=0.277  Sum_probs=250.2

Q ss_pred             eEEeeccCccCeEEEEeCCCC-cEEEEEecCCcEEEEeCCCC-----ceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCe
Q psy17610        116 LTLVNTCHTSAIYDLQFPVNF-SSVFATCSKNDIRIWSVRTL-----NELLRISVMNMICACIVFTYDGKAILSGWNDGF  189 (515)
Q Consensus       116 ~~~~~~~h~~~v~~~~~~~~~-~~l~~~~~d~~i~iw~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  189 (515)
                      ....+.+|.+.|++++|+|++ ..|++++.|++|++|++.+.     .....+.+|...|.+++|+|++++|++++.|+.
T Consensus       374 ~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~  453 (694)
T 3dm0_A          374 LKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGE  453 (694)
T ss_dssp             EEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred             hhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCc
Confidence            444677899999999999875 68889999999999999764     345678899999999999999999999999999


Q ss_pred             EEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceee-EEeeccccCceEEEEEecCC--C
Q psy17610        190 IRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSL-QCVLKEHTSSVSVIQIKSDS--K  266 (515)
Q Consensus       190 i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~--~  266 (515)
                      |++||+.+++....+ .+|...|.+++|+|++++|++++.|+.|++||........ .....+|...|.+++|+|++  .
T Consensus       454 v~vwd~~~~~~~~~~-~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~  532 (694)
T 3dm0_A          454 LRLWDLAAGVSTRRF-VGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQP  532 (694)
T ss_dssp             EEEEETTTTEEEEEE-ECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSC
T ss_pred             EEEEECCCCcceeEE-eCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcc
Confidence            999999999988887 6899999999999999999999999999999985322111 11225788999999999986  5


Q ss_pred             EEEEEeCCCcEEEEEcccceEEEEEEc-CccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEE
Q psy17610        267 EAMSASTDGTCVLWDLIKSTRLIIMIL-PSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDF  345 (515)
Q Consensus       267 ~l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~  345 (515)
                      .+++++.|++|++||+++.+....+.. ...+.+++|+|+++++++++.|+.|++||+.+++.+..+..+  ..+.+++|
T Consensus       533 ~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~--~~v~~~~~  610 (694)
T 3dm0_A          533 TIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEAN--SVIHALCF  610 (694)
T ss_dssp             EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCS--SCEEEEEE
T ss_pred             eEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCC--CcEEEEEE
Confidence            799999999999999999888877764 458999999999999999999999999999999988777654  67999999


Q ss_pred             cCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCC-------------------CCeeEEEECCCCcEEEEEeCCCcEEEE
Q psy17610        346 VDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHA-------------------ASITKIKISPDKKVIVSVSADGGIFLW  406 (515)
Q Consensus       346 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-------------------~~i~~~~~~~~~~~l~~~~~dg~i~iw  406 (515)
                      +|++.++++++ ++.|++||+++++.+..+..+.                   ..+++++|+|++++|++++.||.|++|
T Consensus       611 sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW  689 (694)
T 3dm0_A          611 SPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVW  689 (694)
T ss_dssp             CSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred             cCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEE
Confidence            99999888776 5669999999988776654321                   237899999999999999999999999


Q ss_pred             eCC
Q psy17610        407 TFP  409 (515)
Q Consensus       407 ~~~  409 (515)
                      ++.
T Consensus       690 ~i~  692 (694)
T 3dm0_A          690 GIG  692 (694)
T ss_dssp             EC-
T ss_pred             ecc
Confidence            985

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=100.00  E-value=1.6e-41  Score=314.58  Aligned_cols=287  Identities=18%  Similarity=0.294  Sum_probs=248.5

Q ss_pred             EEeeccCccCeEEEEeCCC----CcEEEEEecCCcEEEEeCCCCceeEEEEe-----cCeEEEEEEEeeC----CCEEEE
Q psy17610        117 TLVNTCHTSAIYDLQFPVN----FSSVFATCSKNDIRIWSVRTLNELLRISV-----MNMICACIVFTYD----GKAILS  183 (515)
Q Consensus       117 ~~~~~~h~~~v~~~~~~~~----~~~l~~~~~d~~i~iw~~~~~~~~~~~~~-----~~~~v~~~~~~~~----~~~l~~  183 (515)
                      ..+..+|.++|.+++|+|+    ...+++++.++.|++||+.+++.+..+..     +...|.+++|+|+    +++|++
T Consensus        11 ~~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~   90 (366)
T 3k26_A           11 NSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAV   90 (366)
T ss_dssp             EEEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEE
T ss_pred             EEeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEE
Confidence            3566689999999999984    56788888888999999999888877765     4467999999999    679999


Q ss_pred             EeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcC-CCCEEEEecCCCcEEEEEccCCceeeEEee---ccccCceEEE
Q psy17610        184 GWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQ-DGTRLLSGGGEGQVRIWKLTRESQSLQCVL---KEHTSSVSVI  259 (515)
Q Consensus       184 ~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~---~~~~~~v~~~  259 (515)
                      ++.||.|++||+.+++.+..+ .+|...|.+++|+| ++++|++++.||.|++||++.  ......+   .+|...|.++
T Consensus        91 ~~~dg~i~v~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~--~~~~~~~~~~~~~~~~v~~~  167 (366)
T 3k26_A           91 AGSRGIIRIINPITMQCIKHY-VGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT--DTLVAIFGGVEGHRDEVLSA  167 (366)
T ss_dssp             EETTCEEEEECTTTCCEEEEE-ESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT--TEEEEEECSTTSCSSCEEEE
T ss_pred             ecCCCEEEEEEchhceEeeee-cCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec--CeEEEEecccccccCceeEE
Confidence            999999999999999998887 58999999999999 999999999999999999954  3445555   6899999999


Q ss_pred             EEecCCCEEEEEeCCCcEEEEEcccceEEEEEE-----------------------------cCccEEEEEEcCCCcEEE
Q psy17610        260 QIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMI-----------------------------LPSMIMSAAYHPSEVQLI  310 (515)
Q Consensus       260 ~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~l~  310 (515)
                      +|+|+++++++++.||.|++||+++++....+.                             +...+.+++|+  +++++
T Consensus       168 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~  245 (366)
T 3k26_A          168 DYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLIL  245 (366)
T ss_dssp             EECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEE
T ss_pred             EECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEE
Confidence            999999999999999999999998765432221                             55678999998  77999


Q ss_pred             EEECCCeEEEEeCCCCce--------------EEEEecCCCccEEEEEEcCC--CCEEEEEcCCCeEEEEEccCCee---
Q psy17610        311 TCSTNKMIDYWETCDGSI--------------IRSLEGSDVAAVNCVDFVDD--GKYFLTGGADQIVKMWMYREGVP---  371 (515)
Q Consensus       311 ~~~~~~~i~~~d~~~~~~--------------~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~---  371 (515)
                      +++.++.|++||+.+++.              +..+..+. ..+.+++|+|+  +++|++++.||.|++||+.++++   
T Consensus       246 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~  324 (366)
T 3k26_A          246 SKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQ-CDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKA  324 (366)
T ss_dssp             EECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSS-CCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGC
T ss_pred             EEecCCEEEEEeCCCccccccccccCCcchheeccccccC-CcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccc
Confidence            999999999999988754              66666665 78999999999  99999999999999999998753   


Q ss_pred             -eeeccCC--CCCeeEEEECCCCcEEEEEeCCCcEEEEeCC
Q psy17610        372 -CFVGIGH--AASITKIKISPDKKVIVSVSADGGIFLWTFP  409 (515)
Q Consensus       372 -~~~~~~~--~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~  409 (515)
                       ...+..|  ...|++++|+|++++|++++.||.|++||+.
T Consensus       325 ~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~  365 (366)
T 3k26_A          325 KCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL  365 (366)
T ss_dssp             EEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred             cceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence             3466777  7999999999999999999999999999975

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=100.00  E-value=2.5e-41  Score=314.10  Aligned_cols=317  Identities=14%  Similarity=0.139  Sum_probs=254.5

Q ss_pred             EEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCc--eEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEcc
Q psy17610        162 ISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGK--LKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLT  239 (515)
Q Consensus       162 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~  239 (515)
                      +..|..+|.+++|+|++++|++++.|+.|++||+.+++  ....+ .+|...|.+++|+|++++|++++.|+.|++||+.
T Consensus         4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~   82 (372)
T 1k8k_C            4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHEL-KEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLK   82 (372)
T ss_dssp             EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEE-ECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEE
T ss_pred             ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeee-cCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECC
Confidence            44588899999999999999999999999999999987  66666 5899999999999999999999999999999997


Q ss_pred             CCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceE---EEEEE--cCccEEEEEEcCCCcEEEEEEC
Q psy17610        240 RESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTR---LIIMI--LPSMIMSAAYHPSEVQLITCST  314 (515)
Q Consensus       240 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~---~~~~~--~~~~~~~~~~~~~~~~l~~~~~  314 (515)
                      .........+..|...|.+++|+|+++++++++.|+.|++||+.....   ...+.  +...+.+++|+|+++++++++.
T Consensus        83 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~  162 (372)
T 1k8k_C           83 GRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC  162 (372)
T ss_dssp             TTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEET
T ss_pred             CCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcC
Confidence            655455555678999999999999999999999999999999987752   23332  3568999999999999999999


Q ss_pred             CCeEEEEeC------------------CCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeecc
Q psy17610        315 NKMIDYWET------------------CDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGI  376 (515)
Q Consensus       315 ~~~i~~~d~------------------~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~  376 (515)
                      ++.+++||+                  ..++.+..+..+. ..+.+++|+|++++|++++.||.|++||+++++++..+.
T Consensus       163 dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~  241 (372)
T 1k8k_C          163 DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSC-GWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLA  241 (372)
T ss_dssp             TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCS-SCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEE
T ss_pred             CCCEEEEEcccccccccccccccccccchhhheEecCCCC-CeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEc
Confidence            999999995                  4677777777665 889999999999999999999999999999999999999


Q ss_pred             CCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEE
Q psy17610        377 GHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQL  456 (515)
Q Consensus       377 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l  456 (515)
                      .|..+|.+++|+|++++|+++ .|+.|++|++............+                              +...-
T Consensus       242 ~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~------------------------------~~~~~  290 (372)
T 1k8k_C          242 SETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRL------------------------------DVPKQ  290 (372)
T ss_dssp             CSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCC------------------------------CCC--
T ss_pred             cCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeecc------------------------------Ccccc
Confidence            999999999999999988877 99999999987611100000000                              00000


Q ss_pred             EEeecCCeEEEE---ecCCCeee------eeec-ccccceEEEEEEc-CCC---cEEEEeecCCeEEEEEE
Q psy17610        457 ITCSTNKMIDYW---ETCDGSII------RSLE-GSDVAAVNCVDFV-DDG---KYFLTGGADQIVKICLY  513 (515)
Q Consensus       457 ~~~~~dg~v~iw---d~~~~~~~------~~~~-~~~~~~v~~~~~s-~~~---~~l~s~~~dg~v~iw~~  513 (515)
                      ........+++|   +. .++..      ..+. +|. .+|++++|+ ++|   ++|++++.||.|++|++
T Consensus       291 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~  359 (372)
T 1k8k_C          291 SSQRGLTARERFQNLDK-KASSEGSAAAGAGLDSLHK-NSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDV  359 (372)
T ss_dssp             ------CHHHHHHHCCC-CC---------CCCSSSSS-SCEEEEEEEESTTTSCSEEEEEETTSEEEEEEH
T ss_pred             chhhhcchhhhhhhccc-ccccccCcccccccccccc-CCcceeEEecCCCcceeeEEEecCCCceEEEEe
Confidence            011112335555   42 23332      3343 666 899999966 676   99999999999999985

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.1e-43  Score=323.70  Aligned_cols=317  Identities=8%  Similarity=0.018  Sum_probs=259.3

Q ss_pred             ccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCce
Q psy17610        121 TCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKL  200 (515)
Q Consensus       121 ~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~  200 (515)
                      +.-...|.+++|+|||+++++++.|++|+  |...++.+   .+|...|.+++|+|+|       .++.+.+|+.   +.
T Consensus        12 ~~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l---~gh~~~v~~V~FsPdg-------~~~~~~~~~~---~~   76 (588)
T 2j04_A           12 KEFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDI---NCNSKNLFHVKEFPLE-------FENKLDFELA---QQ   76 (588)
T ss_dssp             CCCSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSCC---SSBGGGTEEEEEECCC-------CCCTTTTSCC---CS
T ss_pred             hHhhccEEEEEECCCCCEEEEEcCCceee--ccccccee---cCCCccEEEEEECCCC-------CcceEEEEeC---CC
Confidence            34567899999999999999999999999  76665544   6899999999999999       4555555543   32


Q ss_pred             EEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccC-----ceEEEEEecCCCEEEEEeCCC
Q psy17610        201 KFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTS-----SVSVIQIKSDSKEAMSASTDG  275 (515)
Q Consensus       201 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~d~  275 (515)
                      ...+...|...|.+++|+|+|..||+++.||.|++||...    ....+. |..     .+.+++|+|||++|++++.||
T Consensus        77 ~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~----~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DG  151 (588)
T 2j04_A           77 NGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK----MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDG  151 (588)
T ss_dssp             SCSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE----EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTS
T ss_pred             ceEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc----eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCC
Confidence            2233236688999999999999999999999999999532    444555 555     599999999999999999999


Q ss_pred             cEEEEEcccce-------EEEEEEc-----CccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCce---EEEEecCCCccE
Q psy17610        276 TCVLWDLIKST-------RLIIMIL-----PSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSI---IRSLEGSDVAAV  340 (515)
Q Consensus       276 ~i~iwd~~~~~-------~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~---~~~~~~~~~~~i  340 (515)
                      +|++||+.++.       .+..+..     ...|.+++|+|++  +++++.|+.+++||+..++.   ..++...+...|
T Consensus       152 tVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V  229 (588)
T 2j04_A          152 ELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKI  229 (588)
T ss_dssp             EEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCC
T ss_pred             EEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcE
Confidence            99999998874       2455432     2489999999999  88999999999999988773   356654444889


Q ss_pred             EEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEE--CCCCcEEEEEeCCCcEEEEeCCCCcCccCCC
Q psy17610        341 NCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKI--SPDKKVIVSVSADGGIFLWTFPELEDDVGDS  418 (515)
Q Consensus       341 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~  418 (515)
                      .+++|+  |+.||+++ ++.|++||+.+++......+|...+..++|  +|++..|++++.||+ ++|...         
T Consensus       230 ~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d---------  296 (588)
T 2j04_A          230 TDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED---------  296 (588)
T ss_dssp             CCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS---------
T ss_pred             EEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec---------
Confidence            999999  68899887 699999999988774444489999999999  999999999999999 999864         


Q ss_pred             cccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcE
Q psy17610        419 RSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKY  498 (515)
Q Consensus       419 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  498 (515)
                                                 .++++|++..+++.  |+++++|+...+. +..+++ . ..|.+++|||||+.
T Consensus       297 ---------------------------~~~~spd~~l~a~~--d~~v~lW~~~g~~-l~~~~~-~-~~I~~va~SPdG~~  344 (588)
T 2j04_A          297 ---------------------------ELHVTADNIIAPYL--EKKFKKWSTIWNE-FNNYET-T-LVIHGISLSPDGYS  344 (588)
T ss_dssp             ---------------------------SEEEECCCSSHHHH--HHHHHHTTTTTTS-SSSSCC-E-EEEEEEEECTTSSE
T ss_pred             ---------------------------cEEECCCceEEEEc--CCEEEEEECCCCc-eeeecc-c-eEEEEEEECCCCCE
Confidence                                       14589999988875  9999999975444 455555 3 78999999999999


Q ss_pred             EEEeec
Q psy17610        499 FLTGGA  504 (515)
Q Consensus       499 l~s~~~  504 (515)
                      +|+++.
T Consensus       345 lA~~~~  350 (588)
T 2j04_A          345 IAIVYD  350 (588)
T ss_dssp             EEEEEE
T ss_pred             EEEEEe
Confidence            998874

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=100.00  E-value=6.8e-41  Score=309.31  Aligned_cols=293  Identities=14%  Similarity=0.175  Sum_probs=244.6

Q ss_pred             EEEEecCCCcEEEEEEecCCCEEE-EEec---CceEEEEECCCCceeEEeeccCccCeEEEEeCCC---CcEEEEEecCC
Q psy17610         74 ALYLLKDDSGISSLQYNPVNNKVF-VGTV---NCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVN---FSSVFATCSKN  146 (515)
Q Consensus        74 ~~~~~~~~~~v~~~~~s~~~~~l~-~~~~---d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~---~~~l~~~~~d~  146 (515)
                      .....+|...|.+++|+|+++.++ +|+.   |+.|++||+.++........+|..+|.+++|+|+   +.++++++.|+
T Consensus        11 ~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg   90 (357)
T 3i2n_A           11 AHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGG   90 (357)
T ss_dssp             EEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTS
T ss_pred             hhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCC
Confidence            344567999999999999996554 5655   8999999999876655555579999999999998   68999999999


Q ss_pred             cEEEEeCCCCc-eeEEEEecCeEEEEEEE------eeCCCEEEEEeCCCeEEEEecCCCc-eEEEecCCCC----CCeEE
Q psy17610        147 DIRIWSVRTLN-ELLRISVMNMICACIVF------TYDGKAILSGWNDGFIRCFTPQSGK-LKFIIPNAHN----RGVTA  214 (515)
Q Consensus       147 ~i~iw~~~~~~-~~~~~~~~~~~v~~~~~------~~~~~~l~~~~~dg~i~~~~~~~~~-~~~~~~~~~~----~~v~~  214 (515)
                      .|++||+.+++ .+..+..|...|.++.|      +|++++|++++.||.|++||+.+++ ....+ ..|.    ..+.+
T Consensus        91 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~-~~~~~~~~~~v~~  169 (357)
T 3i2n_A           91 NLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANM-EPVQGENKRDCWT  169 (357)
T ss_dssp             CEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEE-CCCTTSCCCCEEE
T ss_pred             eEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceec-cccCCCCCCceEE
Confidence            99999999988 88899999999999955      6889999999999999999999887 55555 3443    37999


Q ss_pred             EE----EcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEec---CCCEEEEEeCCCcEEEEEcccceE
Q psy17610        215 LA----ITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKS---DSKEAMSASTDGTCVLWDLIKSTR  287 (515)
Q Consensus       215 ~~----~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~iwd~~~~~~  287 (515)
                      ++    |+|+++++++++.|+.|++||++....   .....|...|.+++|+|   ++.++++++.||.|++||+++++.
T Consensus       170 ~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~  246 (357)
T 3i2n_A          170 VAFGNAYNQEERVVCAGYDNGDIKLFDLRNMAL---RWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHP  246 (357)
T ss_dssp             EEEECCCC-CCCEEEEEETTSEEEEEETTTTEE---EEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEET
T ss_pred             EEEEeccCCCCCEEEEEccCCeEEEEECccCce---eeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCc
Confidence            98    788999999999999999999965432   33467889999999999   999999999999999999987654


Q ss_pred             EEEE------EcCccEEEEEEcCCCc-EEEEEECCCeEEEEeCCCC-------------------ceEEEEecCCCccEE
Q psy17610        288 LIIM------ILPSMIMSAAYHPSEV-QLITCSTNKMIDYWETCDG-------------------SIIRSLEGSDVAAVN  341 (515)
Q Consensus       288 ~~~~------~~~~~~~~~~~~~~~~-~l~~~~~~~~i~~~d~~~~-------------------~~~~~~~~~~~~~i~  341 (515)
                      ...+      .+...+.+++|+|+++ ++++++.|+.|++||++.+                   +.+..+..+. ..|.
T Consensus       247 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~v~  325 (357)
T 3i2n_A          247 TKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLST-QPIS  325 (357)
T ss_dssp             TTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCS-SCEE
T ss_pred             ccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCC-CCee
Confidence            4333      3566899999999998 8999999999999998754                   3556666665 8999


Q ss_pred             EEEEcCCCCEEE-EEcCCCeEEEEEccCCee
Q psy17610        342 CVDFVDDGKYFL-TGGADQIVKMWMYREGVP  371 (515)
Q Consensus       342 ~~~~~~~~~~l~-~~~~dg~i~i~d~~~~~~  371 (515)
                      +++|+|++++|+ +++.||.|++||+.+.+.
T Consensus       326 ~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~  356 (357)
T 3i2n_A          326 SLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK  356 (357)
T ss_dssp             EEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred             EEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence            999999999998 799999999999976543

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=100.00  E-value=1.1e-40  Score=313.93  Aligned_cols=331  Identities=16%  Similarity=0.243  Sum_probs=245.5

Q ss_pred             EEEEecCCCcEEEEEEec-CCCEEEEEecCceEEEEECCCCceeEEee------------ccCccCeEEEEeCC-CCcEE
Q psy17610         74 ALYLLKDDSGISSLQYNP-VNNKVFVGTVNCEIFLIDMNSGFTLTLVN------------TCHTSAIYDLQFPV-NFSSV  139 (515)
Q Consensus        74 ~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~------------~~h~~~v~~~~~~~-~~~~l  139 (515)
                      ...+.+|.+.|++++|+| ++++||+|+.||.|++||+.++.......            .+|...|.+++|+| ++..+
T Consensus        36 ~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l  115 (408)
T 4a11_B           36 RDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMF  115 (408)
T ss_dssp             EEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCE
T ss_pred             eeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEE
Confidence            345567999999999999 99999999999999999999864433322            35999999999999 77789


Q ss_pred             EEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCC---CEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEE
Q psy17610        140 FATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDG---KAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALA  216 (515)
Q Consensus       140 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~  216 (515)
                      ++++.|+.|++||+.+++....+. +...+.++.|+|.+   .++++++.++.|++||+++++....+ ..|...|.+++
T Consensus       116 ~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~-~~~~~~v~~~~  193 (408)
T 4a11_B          116 TSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHIL-QGHRQEILAVS  193 (408)
T ss_dssp             EEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEE-CCCCSCEEEEE
T ss_pred             EEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeee-cCCCCcEEEEE
Confidence            999999999999999988887776 67788999999854   49999999999999999999988887 68999999999


Q ss_pred             EcCCCC-EEEEecCCCcEEEEEccCCceeeEE--------------eeccccCceEEEEEecCCCEEEEEeCCCcEEEEE
Q psy17610        217 ITQDGT-RLLSGGGEGQVRIWKLTRESQSLQC--------------VLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWD  281 (515)
Q Consensus       217 ~~~~~~-~l~~~~~d~~i~iw~~~~~~~~~~~--------------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd  281 (515)
                      |+|+++ .+++++.||.|++||++........              ....|...|.+++|+|+++++++++.||.|++||
T Consensus       194 ~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd  273 (408)
T 4a11_B          194 WSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWN  273 (408)
T ss_dssp             ECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             ECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEE
Confidence            999988 5889999999999999754322111              1257889999999999999999999999999999


Q ss_pred             cccceEEEEEEcC------ccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEE
Q psy17610        282 LIKSTRLIIMILP------SMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTG  355 (515)
Q Consensus       282 ~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~  355 (515)
                      +.+++........      ...........+..+++++.++.|++||+.+++.+..+..+. ..|.+++|+|++++|+++
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~s~  352 (408)
T 4a11_B          274 SSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHY-KTVDCCVFQSNFQELYSG  352 (408)
T ss_dssp             TTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCS-SCEEEEEEETTTTEEEEE
T ss_pred             CCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCC-CeEEEEEEcCCCCEEEEE
Confidence            9987654433211      112222233445667777889999999999999999998876 899999999999999999


Q ss_pred             cCCCeEEEEEccCCeeeeeccCCCCCeeEEEECC-CCcEEEEEeCCCcEEEEeCCC
Q psy17610        356 GADQIVKMWMYREGVPCFVGIGHAASITKIKISP-DKKVIVSVSADGGIFLWTFPE  410 (515)
Q Consensus       356 ~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iw~~~~  410 (515)
                      +.||.|++||+++++++.....+..   ...+.+ ....+.+.+.++.+++|+.+.
T Consensus       353 ~~dg~i~iw~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~W~~~~  405 (408)
T 4a11_B          353 SRDCNILAWVPSLYEPVPDDDETTT---KSQLNPAFEDAWSSSDEEGGTSAWSHPQ  405 (408)
T ss_dssp             ETTSCEEEEEECC-------------------------------------------
T ss_pred             CCCCeEEEEeCCCCCccCCCCceEe---ccccccccceeecccCccCceeecCCcc
Confidence            9999999999999887765443322   223333 334556677899999998754

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.3e-39  Score=294.95  Aligned_cols=287  Identities=15%  Similarity=0.239  Sum_probs=251.4

Q ss_pred             EEEEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEe
Q psy17610         73 TALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWS  152 (515)
Q Consensus        73 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~  152 (515)
                      ....+.+|.+.|++++| |++++|++|+.||.|++||+.++ .....+..|...|.+++|+|+++.+++++.|+.+++|+
T Consensus        10 ~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~   87 (313)
T 3odt_A           10 LSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQ-WLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVP   87 (313)
T ss_dssp             EEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSS-EEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred             HHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCC-EEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEE
Confidence            34567789999999999 99999999999999999999885 44555667999999999999999999999999999999


Q ss_pred             CCCC---ceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcC-CCCEEEEec
Q psy17610        153 VRTL---NELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQ-DGTRLLSGG  228 (515)
Q Consensus       153 ~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~  228 (515)
                      +...   +.+..+..|...|.++.|  +++++++++.|+.|++||  .++....+ ..|...+.++.|.| +++++++++
T Consensus        88 ~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~  162 (313)
T 3odt_A           88 LFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNL-QAHNASVWDAKVVSFSENKFLTAS  162 (313)
T ss_dssp             TTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEE-ECCSSCEEEEEEEETTTTEEEEEE
T ss_pred             eeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEec-ccCCCceeEEEEccCCCCEEEEEE
Confidence            8754   557778889999999999  578999999999999999  56666666 68999999999998 899999999


Q ss_pred             CCCcEEEEEccCCceeeEEeecc-ccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEE-cCccEEEEEEcCCC
Q psy17610        229 GEGQVRIWKLTRESQSLQCVLKE-HTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMI-LPSMIMSAAYHPSE  306 (515)
Q Consensus       229 ~d~~i~iw~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~  306 (515)
                      .|+.|++||.    ......+.. |...+.+++|+|++. +++++.|+.|++||+++++.+..+. +...+.+++|+|++
T Consensus       163 ~d~~i~i~d~----~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~  237 (313)
T 3odt_A          163 ADKTIKLWQN----DKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG  237 (313)
T ss_dssp             TTSCEEEEET----TEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS
T ss_pred             CCCCEEEEec----CceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC
Confidence            9999999994    233444555 899999999999988 9999999999999999999888887 45689999999999


Q ss_pred             cEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeee
Q psy17610        307 VQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFV  374 (515)
Q Consensus       307 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~  374 (515)
                       .+++++.++.|++||+.+++.+..+..+. ..+.+++|+|+++ +++++.||.|++||+++++....
T Consensus       238 -~l~~~~~dg~v~iwd~~~~~~~~~~~~~~-~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~~  302 (313)
T 3odt_A          238 -DIVSCGEDRTVRIWSKENGSLKQVITLPA-ISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWASE  302 (313)
T ss_dssp             -CEEEEETTSEEEEECTTTCCEEEEEECSS-SCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCCC-
T ss_pred             -CEEEEecCCEEEEEECCCCceeEEEeccC-ceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCceeeh
Confidence             68899999999999999999999998876 7999999999998 56788999999999988765544

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.3e-42  Score=328.41  Aligned_cols=315  Identities=10%  Similarity=0.051  Sum_probs=231.2

Q ss_pred             EecCCCEEEEEecCceEEEEECCCCcee---EEeeccCccCeEEEEeCCC------CcEEEEEecCCcEEEEeCCCCce-
Q psy17610         89 YNPVNNKVFVGTVNCEIFLIDMNSGFTL---TLVNTCHTSAIYDLQFPVN------FSSVFATCSKNDIRIWSVRTLNE-  158 (515)
Q Consensus        89 ~s~~~~~l~~~~~d~~i~iw~~~~~~~~---~~~~~~h~~~v~~~~~~~~------~~~l~~~~~d~~i~iw~~~~~~~-  158 (515)
                      .+|+++.+|+++.|++|+|||+.+++..   ...+.+|.+.|.+++|+|+      +..|++++.|++|++||+.+++. 
T Consensus       169 ~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~  248 (524)
T 2j04_B          169 LNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATD  248 (524)
T ss_dssp             -------------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSS
T ss_pred             cchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccc
Confidence            4788899999999999999999876432   2335568899999999997      56899999999999999987642 


Q ss_pred             ----------eEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCce-EEEecCCCCCCeEEE--EEcCCC-CEE
Q psy17610        159 ----------LLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKL-KFIIPNAHNRGVTAL--AITQDG-TRL  224 (515)
Q Consensus       159 ----------~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~-~~~~~~~~~~~v~~~--~~~~~~-~~l  224 (515)
                                ...+.+|...|.+++|++++ .|++|+.||+|++||+++++. ...+ .+|...|.++  +|+|++ .+|
T Consensus       249 ~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~-~~H~~~V~sv~~~~s~~g~~~l  326 (524)
T 2j04_B          249 VHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYD-QVHDSYILSVSTAYSDFEDTVV  326 (524)
T ss_dssp             SSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEE-ECSSSCEEEEEEECCTTSCCEE
T ss_pred             cccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEe-ecccccEEEEEEEcCCCCCeEE
Confidence                      34677889999999999864 899999999999999997743 3334 6899999999  568887 899


Q ss_pred             EEecCCCcEEEEEccCCceeeEEeeccccC--ceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEE-EcCccEEEEE
Q psy17610        225 LSGGGEGQVRIWKLTRESQSLQCVLKEHTS--SVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIM-ILPSMIMSAA  301 (515)
Q Consensus       225 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-~~~~~~~~~~  301 (515)
                      ++++.|++|++||++..  .....+.+|..  .|.+++|+|+++.+++++.|++|++||++++.....+ .+...|.+++
T Consensus       327 aS~S~D~tvklWD~~~~--~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva  404 (524)
T 2j04_B          327 STVAVDGYFYIFNPKDI--ATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIG  404 (524)
T ss_dssp             EEEETTSEEEEECGGGH--HHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEE
T ss_pred             EEeccCCeEEEEECCCC--CcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEE
Confidence            99999999999999643  33334455543  5789999999999999999999999999988765444 4667899999


Q ss_pred             EcCCCcEEEEEECCCeEEEEeCCCCceEEEEe----cCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEcc-CCeeeeecc
Q psy17610        302 YHPSEVQLITCSTNKMIDYWETCDGSIIRSLE----GSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYR-EGVPCFVGI  376 (515)
Q Consensus       302 ~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~  376 (515)
                      |+|+++.|++|+.|++|++||+... .+....    ......+.+++|+|+++.+. ...+  ..+|+.. ++..+..+.
T Consensus       405 ~Sp~g~~l~Sgs~Dgtv~lwd~~~~-~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~-~~~~--~~~~~~~~~g~~~~~l~  480 (524)
T 2j04_B          405 VSRLHPMVLAGSADGSLIITNAARR-LLHGIKNSSATQKSLRLWKWDYSIKDDKYR-IDSS--YEVYPLTVNDVSKAKID  480 (524)
T ss_dssp             CCSSCCBCEEEETTTEEECCBSCSS-TTTCC------CCCCEEEECBCCSSSCEEE-ECCC--CCCCC------------
T ss_pred             eCCCCCeEEEEECCCEEEEEechHh-hccccccCccceeeeEEEEeccCCCCCeEE-ccCC--ceecccccCCcceeeec
Confidence            9999999999999999999998654 222111    11113577899999998553 2222  3344332 466778889


Q ss_pred             CCCCCeeEEEECCCCc---EEEEEeCCCcEEEEeCCCC
Q psy17610        377 GHAASITKIKISPDKK---VIVSVSADGGIFLWTFPEL  411 (515)
Q Consensus       377 ~~~~~i~~~~~~~~~~---~l~~~~~dg~i~iw~~~~~  411 (515)
                      +|...|.+++|+|++.   .+|+|+.||.|+||++...
T Consensus       481 gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~  518 (524)
T 2j04_B          481 AHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSLE  518 (524)
T ss_dssp             -CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSCC
T ss_pred             CCCceEEEEECCCCCCccHHHHhhccCceEEEEEcccc
Confidence            9999999999999954   9999999999999998653

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=100.00  E-value=8.2e-40  Score=308.04  Aligned_cols=297  Identities=17%  Similarity=0.260  Sum_probs=249.3

Q ss_pred             cEEEEEEecCCCEEEEEecCceEEEEECCCCceeEE-eeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEE
Q psy17610         83 GISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTL-VNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLR  161 (515)
Q Consensus        83 ~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~  161 (515)
                      ..+.|+||++ ++||+|. |++|+|||..+|+.... .+.+|...|++++|+|+|++|++++.|+.|+|||+++++.+..
T Consensus       107 y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~  184 (420)
T 4gga_A          107 YLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN  184 (420)
T ss_dssp             TCBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred             cceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEE
Confidence            4678999975 5788875 88999999999865543 3456888999999999999999999999999999999999999


Q ss_pred             EEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCC
Q psy17610        162 ISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRE  241 (515)
Q Consensus       162 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~  241 (515)
                      +.+|...+.++.+  ++..|++++.|+.+++||............+|...+..+.++|+++++++++.|+.+++|+....
T Consensus       185 ~~~h~~~v~~~s~--~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~  262 (420)
T 4gga_A          185 MTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPG  262 (420)
T ss_dssp             ECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCC
T ss_pred             EeCCCCceEEEee--CCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccc
Confidence            9999999988766  57899999999999999998765544444789999999999999999999999999999998654


Q ss_pred             ce--eeEEeeccccCceEEEEEecCCCE-EEE--EeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEE--C
Q psy17610        242 SQ--SLQCVLKEHTSSVSVIQIKSDSKE-AMS--ASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCS--T  314 (515)
Q Consensus       242 ~~--~~~~~~~~~~~~v~~~~~~~~~~~-l~~--~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~  314 (515)
                      ..  ........|...|.+++|+|++.. +++  ++.|++|++||+.+++....+..+..+.++.|+|+++.+++++  .
T Consensus       263 ~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~  342 (420)
T 4gga_A          263 EGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFA  342 (420)
T ss_dssp             SSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTT
T ss_pred             cccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecC
Confidence            32  344567789999999999997654 444  3479999999999999999999999999999999999998876  6


Q ss_pred             CCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeE
Q psy17610        315 NKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITK  384 (515)
Q Consensus       315 ~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~  384 (515)
                      |+.|++||+.+++++..+.+|. ..|.+++|+|+|++|++|+.|++|++||+.+..+......+...+..
T Consensus       343 d~~I~iwd~~~~~~v~~l~gH~-~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~~~~~~~~~~~  411 (420)
T 4gga_A          343 QNQLVIWKYPTMAKVAELKGHT-SRVLSLTMSPDGATVASAAADETLRLWRCFELDPARRREREKASAAK  411 (420)
T ss_dssp             TCCEEEEETTTCCEEEEECCCS-SCEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC------------
T ss_pred             CCEEEEEECCCCcEEEEEcCCC-CCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCccchhhhccCCccc
Confidence            8999999999999999999876 89999999999999999999999999999877666555555444433

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=100.00  E-value=7.2e-40  Score=306.61  Aligned_cols=293  Identities=17%  Similarity=0.276  Sum_probs=248.1

Q ss_pred             EEEecCCCc--EEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEe
Q psy17610         75 LYLLKDDSG--ISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWS  152 (515)
Q Consensus        75 ~~~~~~~~~--v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~  152 (515)
                      +...+|...  +.+++|+  ++.+++++.|+.|++||+.++.........|...|.+++|+|++++|++++.|+.|++||
T Consensus        85 ~~~~~~~~~~~~~~~~~s--~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd  162 (401)
T 4aez_A           85 LDAPGIIDDYYLNLLDWS--NLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYD  162 (401)
T ss_dssp             EECTTCCCCTTCBCEEEC--TTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             eeCCCCcCCceEEEEeec--CCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEE
Confidence            344456655  4455665  456888889999999999998766666666899999999999999999999999999999


Q ss_pred             CCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCC-CceEEEecCCCCCCeEEEEEcCCCCEEEEecCCC
Q psy17610        153 VRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQS-GKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEG  231 (515)
Q Consensus       153 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~  231 (515)
                      +.+++.+..+..|...|.+++|  +++.+++++.||.|++||++. +.....+ ..|...|.+++|+|++++|++++.|+
T Consensus       163 ~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~d~  239 (401)
T 4aez_A          163 VESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTL-QGHSSEVCGLAWRSDGLQLASGGNDN  239 (401)
T ss_dssp             TTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEE-ECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred             CcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEE-cCCCCCeeEEEEcCCCCEEEEEeCCC
Confidence            9999999999999999999999  567999999999999999995 4455555 68999999999999999999999999


Q ss_pred             cEEEEEccCCceeeEEeeccccCceEEEEEecCCCEE-EEEe--CCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcE
Q psy17610        232 QVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEA-MSAS--TDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQ  308 (515)
Q Consensus       232 ~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (515)
                      .|++||++  .......+..|...|.+++|+|++..+ ++++  .|+.|++||+.+++....+.....+.+++|+|+++.
T Consensus       240 ~v~iwd~~--~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~  317 (401)
T 4aez_A          240 VVQIWDAR--SSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKE  317 (401)
T ss_dssp             CEEEEETT--CSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSE
T ss_pred             eEEEccCC--CCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCe
Confidence            99999995  355666778899999999999977554 4544  699999999999999999999999999999999999


Q ss_pred             EEEEE--CCCeEEEEeCCCCceEEE--EecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeec
Q psy17610        309 LITCS--TNKMIDYWETCDGSIIRS--LEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVG  375 (515)
Q Consensus       309 l~~~~--~~~~i~~~d~~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~  375 (515)
                      +++++  .++.|++||+.+++....  +..+. ..+.+++|+|++++|++++.||.|++|++.+++.+...
T Consensus       318 l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~-~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~~  387 (401)
T 4aez_A          318 IMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHD-TRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKRP  387 (401)
T ss_dssp             EEEEECTTTCEEEEEEEETTEEEEEEEEECCS-SCCCEEEECTTSSEEEEECTTSEEEEEECCC-------
T ss_pred             EEEEeecCCCcEEEEecCCccceeEEEecCCC-CCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcccccc
Confidence            99954  899999999998765554  44554 88999999999999999999999999999988776554

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=100.00  E-value=2.2e-41  Score=320.09  Aligned_cols=293  Identities=16%  Similarity=0.209  Sum_probs=235.6

Q ss_pred             EEecCCCcEEEEEEec-CCCEEEEEecCceEEEEECCCCceeE-EeeccCccCeEEEEeCC-CCcEEEEEecCCcEEEEe
Q psy17610         76 YLLKDDSGISSLQYNP-VNNKVFVGTVNCEIFLIDMNSGFTLT-LVNTCHTSAIYDLQFPV-NFSSVFATCSKNDIRIWS  152 (515)
Q Consensus        76 ~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~iw~~~~~~~~~-~~~~~h~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~  152 (515)
                      ...+|...|+||+|+| ++++||+|+.||.|+|||+.++.... ..+.+|.++|++|+|+| ++.+|++++.|++|++||
T Consensus       114 ~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd  193 (435)
T 4e54_B          114 KAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQD  193 (435)
T ss_dssp             EEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEE
T ss_pred             cCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEee
Confidence            3567899999999999 66799999999999999998764433 34568999999999998 678999999999999999


Q ss_pred             CCCCceeEEEEe--cCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCC-EEEEecC
Q psy17610        153 VRTLNELLRISV--MNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGT-RLLSGGG  229 (515)
Q Consensus       153 ~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~  229 (515)
                      ++++........  +...+.+++|+|++++|++|+.||.|++||++.. .+..+ .+|...|.+++|+|++. ++++++.
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~-~~~~~-~~h~~~v~~v~~~p~~~~~~~s~s~  271 (435)
T 4e54_B          194 FKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK-ELWNL-RMHKKKVTHVALNPCCDWFLATASV  271 (435)
T ss_dssp             TTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC-BCCCS-BCCSSCEEEEEECTTCSSEEEEEET
T ss_pred             ccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc-eeEEE-ecccceEEeeeecCCCceEEEEecC
Confidence            986543332222  2335788999999999999999999999998754 44444 68999999999999875 7889999


Q ss_pred             CCcEEEEEccCCcee-eEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCc-------cEEEEE
Q psy17610        230 EGQVRIWKLTRESQS-LQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPS-------MIMSAA  301 (515)
Q Consensus       230 d~~i~iw~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-------~~~~~~  301 (515)
                      |+.|++||++..... ......+|...|.+++|+|++++|++++.|+.|++||+.++.....+..+.       ......
T Consensus       272 d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  351 (435)
T 4e54_B          272 DQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAA  351 (435)
T ss_dssp             TSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCE
T ss_pred             cceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEE
Confidence            999999999654322 223346799999999999999999999999999999999887666553321       234567


Q ss_pred             EcCCCcEEEEEEC------------CCeEEEEeCCCCceEEEEecCCCccEEEE-EEcCCCCEEEEEcCCCeEEEEEccC
Q psy17610        302 YHPSEVQLITCST------------NKMIDYWETCDGSIIRSLEGSDVAAVNCV-DFVDDGKYFLTGGADQIVKMWMYRE  368 (515)
Q Consensus       302 ~~~~~~~l~~~~~------------~~~i~~~d~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~l~~~~~dg~i~i~d~~~  368 (515)
                      ++|++..++++..            ++.|++||..+++.+..+..++...|.++ +|+|+|++|++|+ |+.|+||++++
T Consensus       352 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~  430 (435)
T 4e54_B          352 WHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQE  430 (435)
T ss_dssp             ECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC-
T ss_pred             EcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCc
Confidence            7887777776642            35799999999999999887766788877 6999999999886 78999999988


Q ss_pred             Cee
Q psy17610        369 GVP  371 (515)
Q Consensus       369 ~~~  371 (515)
                      ++.
T Consensus       431 gk~  433 (435)
T 4e54_B          431 ART  433 (435)
T ss_dssp             ---
T ss_pred             Cee
Confidence            764

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=100.00  E-value=1.6e-40  Score=305.59  Aligned_cols=289  Identities=13%  Similarity=0.157  Sum_probs=227.1

Q ss_pred             CCCcEEEEEEecCCCEEEEEecC-------ceEEEEECCCCce---------eEEeeccCccCeEEEEeCCCCcEEEEEe
Q psy17610         80 DDSGISSLQYNPVNNKVFVGTVN-------CEIFLIDMNSGFT---------LTLVNTCHTSAIYDLQFPVNFSSVFATC  143 (515)
Q Consensus        80 ~~~~v~~~~~s~~~~~l~~~~~d-------~~i~iw~~~~~~~---------~~~~~~~h~~~v~~~~~~~~~~~l~~~~  143 (515)
                      .+-+|.+++|+||+++|++|+.+       +.|++|+++.+..         ....+.+|...|.+++++++  .+++++
T Consensus        13 ~g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~~--~~~~g~   90 (365)
T 4h5i_A           13 VGYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASKG--IILVGC   90 (365)
T ss_dssp             CSSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEETT--EEEEEC
T ss_pred             CCCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCCC--EEEEEE
Confidence            35689999999999999998753       4699999876422         12245678889998887644  666654


Q ss_pred             -----------cCCcEEEEeCCCCceeEEE-E--------ecCeEEEEEEEeeCCCEEEEEe--CCCeEEEEecCCCceE
Q psy17610        144 -----------SKNDIRIWSVRTLNELLRI-S--------VMNMICACIVFTYDGKAILSGW--NDGFIRCFTPQSGKLK  201 (515)
Q Consensus       144 -----------~d~~i~iw~~~~~~~~~~~-~--------~~~~~v~~~~~~~~~~~l~~~~--~dg~i~~~~~~~~~~~  201 (515)
                                 .|+.+++|++.+....... .        .+...+.+++|+|||+++++++  .|+.|++||+++++.+
T Consensus        91 ~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~  170 (365)
T 4h5i_A           91 NENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEK  170 (365)
T ss_dssp             CCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEE
T ss_pred             CCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEE
Confidence                       3678999998765433222 1        2334588999999999987654  6899999999999998


Q ss_pred             EEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCC----cE
Q psy17610        202 FIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDG----TC  277 (515)
Q Consensus       202 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~----~i  277 (515)
                      ..+  .|...|.+++|+|+|+++++++.+ .+.+|+..............|...|.+++|+|+++.+++++.|+    .+
T Consensus       171 ~~~--~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i  247 (365)
T 4h5i_A          171 FEI--ETRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVL  247 (365)
T ss_dssp             EEE--ECSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEE
T ss_pred             EEe--CCCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEE
Confidence            887  477889999999999999999865 56667665455445556677889999999999999999998876    46


Q ss_pred             EEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcC
Q psy17610        278 VLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA  357 (515)
Q Consensus       278 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~  357 (515)
                      +.|++........                                     ....+..+. ..|++++|+|+|++||+|+.
T Consensus       248 ~~~~~~~~~~~~~-------------------------------------~~~~~~~~~-~~V~~~~~Spdg~~lasgs~  289 (365)
T 4h5i_A          248 TKISIKSGNTSVL-------------------------------------RSKQVTNRF-KGITSMDVDMKGELAVLASN  289 (365)
T ss_dssp             EEEEEETTEEEEE-------------------------------------EEEEEESSC-SCEEEEEECTTSCEEEEEET
T ss_pred             eecccccceecce-------------------------------------eeeeecCCC-CCeEeEEECCCCCceEEEcC
Confidence            6666544322110                                     112333443 78999999999999999999


Q ss_pred             CCeEEEEEccCCeeeee-ccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCC
Q psy17610        358 DQIVKMWMYREGVPCFV-GIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPEL  411 (515)
Q Consensus       358 dg~i~i~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  411 (515)
                      |+.|+|||+++++++.. +.+|...|++++|+||+++|++++.|++|+||+++..
T Consensus       290 D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~  344 (365)
T 4h5i_A          290 DNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN  344 (365)
T ss_dssp             TSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred             CCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence            99999999999999887 5789999999999999999999999999999999654

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=100.00  E-value=3.5e-40  Score=305.60  Aligned_cols=304  Identities=13%  Similarity=0.161  Sum_probs=247.5

Q ss_pred             EEEecCCCCCCeEEEEEcCC----CCEEEEecCCCcEEEEEccCCceeeEEeec-----cccCceEEEEEecC----CCE
Q psy17610        201 KFIIPNAHNRGVTALAITQD----GTRLLSGGGEGQVRIWKLTRESQSLQCVLK-----EHTSSVSVIQIKSD----SKE  267 (515)
Q Consensus       201 ~~~~~~~~~~~v~~~~~~~~----~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~----~~~  267 (515)
                      ...+..+|..+|.+++|+|+    ...+++++.++.|++||+....  ....+.     .|...|.+++|+|+    +.+
T Consensus        10 ~~~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~   87 (366)
T 3k26_A           10 VNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQG--EIRLLQSYVDADADENFYTCAWTYDSNTSHPL   87 (366)
T ss_dssp             EEEEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGG--CEEEEEEEECSCTTCCEEEEEEEECTTTCCEE
T ss_pred             EEEeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCc--EEEeeeeccccCCCCcEEEEEeccCCCCCCCE
Confidence            33455789999999999984    4567777777899999996433  222333     25678999999999    668


Q ss_pred             EEEEeCCCcEEEEEcccceEEEEEE-cCccEEEEEEcC-CCcEEEEEECCCeEEEEeCCCCceEEEEe--cCCCccEEEE
Q psy17610        268 AMSASTDGTCVLWDLIKSTRLIIMI-LPSMIMSAAYHP-SEVQLITCSTNKMIDYWETCDGSIIRSLE--GSDVAAVNCV  343 (515)
Q Consensus       268 l~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~-~~~~l~~~~~~~~i~~~d~~~~~~~~~~~--~~~~~~i~~~  343 (515)
                      +++++.||.|++||+.+++.+..+. +...+.+++|+| ++.++++++.|+.|++||+++++.+..+.  ..+...+.++
T Consensus        88 l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~  167 (366)
T 3k26_A           88 LAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSA  167 (366)
T ss_dssp             EEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEE
T ss_pred             EEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEE
Confidence            9999999999999999999888887 567899999999 89999999999999999999999988883  2334899999


Q ss_pred             EEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccC----------------------------CCCCeeEEEECCCCcEEE
Q psy17610        344 DFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIG----------------------------HAASITKIKISPDKKVIV  395 (515)
Q Consensus       344 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~----------------------------~~~~i~~~~~~~~~~~l~  395 (515)
                      +|+|++++|++++.||.|++||+++++....+..                            |...|.+++|+  +++|+
T Consensus       168 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~  245 (366)
T 3k26_A          168 DYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLIL  245 (366)
T ss_dssp             EECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEE
T ss_pred             EECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEE
Confidence            9999999999999999999999988765544433                            99999999998  77999


Q ss_pred             EEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccC--CcEEEEeecCCeEEEEecCCC
Q psy17610        396 SVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPS--EVQLITCSTNKMIDYWETCDG  473 (515)
Q Consensus       396 ~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~--~~~l~~~~~dg~v~iwd~~~~  473 (515)
                      +++.|+.|++||+...............      ..........|...+.+++|+|+  +++|++++.||.|++||+.++
T Consensus       246 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~  319 (366)
T 3k26_A          246 SKSCENAIVCWKPGKMEDDIDKIKPSES------NVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVE  319 (366)
T ss_dssp             EECSSSEEEEEEESSTTCCGGGCCTTCC------CEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSS
T ss_pred             EEecCCEEEEEeCCCccccccccccCCc------chheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCC
Confidence            9999999999999876542222111110      01122334557778999999999  999999999999999999988


Q ss_pred             ee----eeeecccc-cceEEEEEEcCCCcEEEEeecCCeEEEEEEe
Q psy17610        474 SI----IRSLEGSD-VAAVNCVDFVDDGKYFLTGGADQIVKICLYI  514 (515)
Q Consensus       474 ~~----~~~~~~~~-~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~  514 (515)
                      ++    ...+..|. ...|.+++|+|++++|++++.||.|++||+.
T Consensus       320 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~  365 (366)
T 3k26_A          320 DPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL  365 (366)
T ss_dssp             SGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred             CCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence            64    34677662 3899999999999999999999999999974

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=100.00  E-value=4e-42  Score=319.85  Aligned_cols=321  Identities=10%  Similarity=0.077  Sum_probs=233.6

Q ss_pred             cCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCc-eeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCc
Q psy17610         79 KDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGF-TLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLN  157 (515)
Q Consensus        79 ~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~  157 (515)
                      .+.++|++++|+|++++||+|+.|+.|++||+.++. .....+.+|...|.+++|+|++++|++++.|+.|++||+.+++
T Consensus         9 ~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~   88 (377)
T 3dwl_C            9 ILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDG   88 (377)
T ss_dssp             ECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------
T ss_pred             cCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCC
Confidence            367899999999999999999999999999999863 5556677899999999999999999999999999999999877


Q ss_pred             ---eeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCce---EEEecCCCCCCeEEEEEcCCCCEEEEecCCC
Q psy17610        158 ---ELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKL---KFIIPNAHNRGVTALAITQDGTRLLSGGGEG  231 (515)
Q Consensus       158 ---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~  231 (515)
                         ....+..|...|.+++|+|++++|++++.|+.|++||+++++.   ...+...|...|.+++|+|++++|++++.|+
T Consensus        89 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~  168 (377)
T 3dwl_C           89 TWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADR  168 (377)
T ss_dssp             CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSS
T ss_pred             ceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCC
Confidence               6677778999999999999999999999999999999998873   5566444999999999999999999999999


Q ss_pred             cEEEEEccCC----------------ceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceE----EEEE
Q psy17610        232 QVRIWKLTRE----------------SQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTR----LIIM  291 (515)
Q Consensus       232 ~i~iw~~~~~----------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~----~~~~  291 (515)
                      .|++||+...                .......+ +|...|.+++|+|++++|++++.|+.|++||+.+++.    +..+
T Consensus       169 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~  247 (377)
T 3dwl_C          169 KAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITV  247 (377)
T ss_dssp             CEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCE
T ss_pred             EEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEee
Confidence            9999998522                23445555 8999999999999999999999999999999998875    4444


Q ss_pred             E-cCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCc--eEEEEecCCC--------------ccEEEEEEcCCCCEEEE
Q psy17610        292 I-LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGS--IIRSLEGSDV--------------AAVNCVDFVDDGKYFLT  354 (515)
Q Consensus       292 ~-~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~--~~~~~~~~~~--------------~~i~~~~~~~~~~~l~~  354 (515)
                      . +...+.+++|+|+++++++++.++.+ +|+.....  ....+.....              .....+.|++....+..
T Consensus       248 ~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (377)
T 3dwl_C          248 KLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRN  326 (377)
T ss_dssp             ECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC---------------
T ss_pred             cCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccccccccccc
Confidence            4 34579999999999999888766666 66654322  1111111100              01223333332222221


Q ss_pred             EcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCC-c---EEEEEeCCCcEEEEeC
Q psy17610        355 GGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDK-K---VIVSVSADGGIFLWTF  408 (515)
Q Consensus       355 ~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~---~l~~~~~dg~i~iw~~  408 (515)
                      ....|...       ........|...|+++++.+.. .   .|++++.||.|++||+
T Consensus       327 ~~~~g~~~-------~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl  377 (377)
T 3dwl_C          327 MDLKGSSQ-------SISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL  377 (377)
T ss_dssp             -----------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred             hhhccccc-------cccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence            11111111       1222345799999999976643 3   6999999999999985

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.2e-42  Score=318.92  Aligned_cols=316  Identities=9%  Similarity=0.077  Sum_probs=251.4

Q ss_pred             CCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCcee
Q psy17610         80 DDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNEL  159 (515)
Q Consensus        80 ~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~  159 (515)
                      -..+|.+++|||||+++|+++.|++|+  |.+.++.    +.+|...|.+++|+|+|       .++.+.+|+.+.. .+
T Consensus        14 ~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~----l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~-~~   79 (588)
T 2j04_A           14 FEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKD----INCNSKNLFHVKEFPLE-------FENKLDFELAQQN-GL   79 (588)
T ss_dssp             CSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSC----CSSBGGGTEEEEEECCC-------CCCTTTTSCCCSS-CS
T ss_pred             hhccEEEEEECCCCCEEEEEcCCceee--cccccce----ecCCCccEEEEEECCCC-------CcceEEEEeCCCc-eE
Confidence            468899999999999999999999999  7555432    26899999999999998       4666666654322 22


Q ss_pred             EEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCC-----CeEEEEEcCCCCEEEEecCCCcEE
Q psy17610        160 LRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNR-----GVTALAITQDGTRLLSGGGEGQVR  234 (515)
Q Consensus       160 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~d~~i~  234 (515)
                      ..+ .+...|.+++|+|+|++||+++.||.+++||.++  ....+ . |..     .+.+++|+|+|++|++|+.||+|+
T Consensus        80 ~~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l-~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVk  154 (588)
T 2j04_A           80 LNS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNL-D-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQ  154 (588)
T ss_dssp             STT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEEC-C-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEE
T ss_pred             eec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeec-c-CCCccccccEEEEEEcCCCCEEEEEcCCCEEE
Confidence            222 3477899999999999999999999999999554  55444 4 554     599999999999999999999999


Q ss_pred             EEEccCCce-----eeEEee----ccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceE---EEEEE--cCccEEEE
Q psy17610        235 IWKLTRESQ-----SLQCVL----KEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTR---LIIMI--LPSMIMSA  300 (515)
Q Consensus       235 iw~~~~~~~-----~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~---~~~~~--~~~~~~~~  300 (515)
                      +||+..+..     .....+    .+|...|.+++|+|+|  +++++.|+++++||+..+..   ...+.  +...|.++
T Consensus       155 IWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~sv  232 (588)
T 2j04_A          155 FFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDL  232 (588)
T ss_dssp             EEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCE
T ss_pred             EEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEE
Confidence            999975431     124454    6788899999999999  88999999999999988763   23442  34579999


Q ss_pred             EEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEE--cCCCCEEEEEcCCCeEEEEEccCCeeeeeccCC
Q psy17610        301 AYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDF--VDDGKYFLTGGADQIVKMWMYREGVPCFVGIGH  378 (515)
Q Consensus       301 ~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~  378 (515)
                      +|+  ++.+++++ ++.|++||+.+++......++ ...+..++|  +|++..+++++++|+ ++|..+           
T Consensus       233 aFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh-~~~V~~va~~~s~d~~~La~a~edG~-klw~~d-----------  296 (588)
T 2j04_A          233 KIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGS-LENFHIIPLNHEKESTILLMSNKTSY-KVLLED-----------  296 (588)
T ss_dssp             EEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSC-CSCCCEEEETTCSSCEEEEECSSCEE-EEEESS-----------
T ss_pred             EEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCC-CceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec-----------
Confidence            999  68888887 699999999887774444354 489999999  999999999999999 999986           


Q ss_pred             CCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEE
Q psy17610        379 AASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLIT  458 (515)
Q Consensus       379 ~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~  458 (515)
                           .++++||+..+++.  |+++++|+.......     .                 ......|.+++|||||+.+|+
T Consensus       297 -----~~~~spd~~l~a~~--d~~v~lW~~~g~~l~-----~-----------------~~~~~~I~~va~SPdG~~lA~  347 (588)
T 2j04_A          297 -----ELHVTADNIIAPYL--EKKFKKWSTIWNEFN-----N-----------------YETTLVIHGISLSPDGYSIAI  347 (588)
T ss_dssp             -----SEEEECCCSSHHHH--HHHHHHTTTTTTSSS-----S-----------------SCCEEEEEEEEECTTSSEEEE
T ss_pred             -----cEEECCCceEEEEc--CCEEEEEECCCCcee-----e-----------------eccceEEEEEEECCCCCEEEE
Confidence                 26699999887764  999999987543210     0                 011234899999999999998


Q ss_pred             eec
Q psy17610        459 CST  461 (515)
Q Consensus       459 ~~~  461 (515)
                      ++.
T Consensus       348 ~~~  350 (588)
T 2j04_A          348 VYD  350 (588)
T ss_dssp             EEE
T ss_pred             EEe
Confidence            863

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=100.00  E-value=9.6e-40  Score=307.39  Aligned_cols=309  Identities=18%  Similarity=0.256  Sum_probs=255.6

Q ss_pred             CCeEEEEecCCCceEEEecCCCCCCeEEEEEcC-CCCEEEEecCCCcEEEEEccCCceeeEEee-----------ccccC
Q psy17610        187 DGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQ-DGTRLLSGGGEGQVRIWKLTRESQSLQCVL-----------KEHTS  254 (515)
Q Consensus       187 dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~-----------~~~~~  254 (515)
                      ++.+++|+++.++....+ .+|...|++++|+| ++++|++++.||.|++||+...........           .+|..
T Consensus        22 ~~~~~v~~~~~~~~~~~~-~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (408)
T 4a11_B           22 ESTRRVLGLELNKDRDVE-RIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRY  100 (408)
T ss_dssp             HHHHHHHTEEECTTEEEC-CCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSS
T ss_pred             cCcceeeccccCcceeee-eccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCC
Confidence            345778888877777666 68999999999999 999999999999999999975433222211           25999


Q ss_pred             ceEEEEEec-CCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCC---cEEEEEECCCeEEEEeCCCCceEE
Q psy17610        255 SVSVIQIKS-DSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSE---VQLITCSTNKMIDYWETCDGSIIR  330 (515)
Q Consensus       255 ~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~~~~~~~~i~~~d~~~~~~~~  330 (515)
                      .|.+++|+| ++.++++++.||.|++||+.+++....+.....+.++.+.|.+   .++++++.++.|++||+++++.+.
T Consensus       101 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~  180 (408)
T 4a11_B          101 SVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSH  180 (408)
T ss_dssp             CEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCE
T ss_pred             cEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceee
Confidence            999999999 7789999999999999999999999999999999999999854   499999999999999999999999


Q ss_pred             EEecCCCccEEEEEEcCCCC-EEEEEcCCCeEEEEEccCCe-eeeec---------------cCCCCCeeEEEECCCCcE
Q psy17610        331 SLEGSDVAAVNCVDFVDDGK-YFLTGGADQIVKMWMYREGV-PCFVG---------------IGHAASITKIKISPDKKV  393 (515)
Q Consensus       331 ~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~-~~~~~---------------~~~~~~i~~~~~~~~~~~  393 (515)
                      .+..+. ..+.+++|+|+++ ++++++.||.|++||++++. .+..+               ..|...|.+++|+|++++
T Consensus       181 ~~~~~~-~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  259 (408)
T 4a11_B          181 ILQGHR-QEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLH  259 (408)
T ss_dssp             EECCCC-SCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSE
T ss_pred             eecCCC-CcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCE
Confidence            888776 8999999999998 58999999999999998764 33333               578899999999999999


Q ss_pred             EEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCC
Q psy17610        394 IVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDG  473 (515)
Q Consensus       394 l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~  473 (515)
                      |++++.||.|++||+...+............               ....+........+..+++++.++.|++||+.++
T Consensus       260 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~  324 (408)
T 4a11_B          260 LLTVGTDNRMRLWNSSNGENTLVNYGKVCNN---------------SKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSG  324 (408)
T ss_dssp             EEEEETTSCEEEEETTTCCBCCCCCCCCCCC---------------CSSCCCCEECCSSSSCEEEEEETTEEEEEETTTC
T ss_pred             EEEecCCCeEEEEECCCCccceecccccccc---------------ccccceeEEecCCCceEEEEecCCEEEEEECcCC
Confidence            9999999999999998765322111110000               0011112222334556777788999999999999


Q ss_pred             eeeeeecccccceEEEEEEcCCCcEEEEeecCCeEEEEEE
Q psy17610        474 SIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLY  513 (515)
Q Consensus       474 ~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~  513 (515)
                      +++..+.+|. ..|.+++|+|++++|++++.||.|++|++
T Consensus       325 ~~~~~~~~~~-~~v~~~~~s~~~~~l~s~~~dg~i~iw~~  363 (408)
T 4a11_B          325 EQITMLKGHY-KTVDCCVFQSNFQELYSGSRDCNILAWVP  363 (408)
T ss_dssp             CEEEEECCCS-SCEEEEEEETTTTEEEEEETTSCEEEEEE
T ss_pred             cceeeeccCC-CeEEEEEEcCCCCEEEEECCCCeEEEEeC
Confidence            9999999987 99999999999999999999999999997

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=100.00  E-value=5.9e-41  Score=317.18  Aligned_cols=302  Identities=13%  Similarity=0.147  Sum_probs=229.0

Q ss_pred             CCCCCCeEEEEEcC-CCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEec-CCCEEEEEeCCCcEEEEEcc
Q psy17610        206 NAHNRGVTALAITQ-DGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKS-DSKEAMSASTDGTCVLWDLI  283 (515)
Q Consensus       206 ~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~  283 (515)
                      .+|...|++++|+| ++++||+|+.||.|+|||+..........+.+|.+.|.+++|+| ++++|++++.||+|++||++
T Consensus       116 ~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~  195 (435)
T 4e54_B          116 APFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFK  195 (435)
T ss_dssp             EECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETT
T ss_pred             CCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeecc
Confidence            46888999999999 56799999999999999997666666667789999999999998 68899999999999999998


Q ss_pred             cceEEEEEEcC---ccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCC-EEEEEcCCC
Q psy17610        284 KSTRLIIMILP---SMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGK-YFLTGGADQ  359 (515)
Q Consensus       284 ~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg  359 (515)
                      +..........   ..+.+++|+|++.++++++.+|.|++||++. +.+..+..|. ..|.+++|+|+++ ++++++.|+
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~-~~v~~v~~~p~~~~~~~s~s~d~  273 (435)
T 4e54_B          196 GNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-KELWNLRMHK-KKVTHVALNPCCDWFLATASVDQ  273 (435)
T ss_dssp             SCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-CBCCCSBCCS-SCEEEEEECTTCSSEEEEEETTS
T ss_pred             CCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-ceeEEEeccc-ceEEeeeecCCCceEEEEecCcc
Confidence            76554444332   2478899999999999999999999999864 5556666665 8999999999876 788999999


Q ss_pred             eEEEEEccCCeeee---eccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeeccccccccee
Q psy17610        360 IVKMWMYREGVPCF---VGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLI  436 (515)
Q Consensus       360 ~i~i~d~~~~~~~~---~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  436 (515)
                      .|++||+++.+...   ...+|...|++++|+|++++|++++.||.|++||+................. ..  ......
T Consensus       274 ~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~-~~--~~~~~~  350 (435)
T 4e54_B          274 TVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHF-QH--LTPIKA  350 (435)
T ss_dssp             BCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCC-SS--SCCCBC
T ss_pred             eeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEeccccccc-cc--ceeEEE
Confidence            99999998765433   3367999999999999999999999999999999987643211110000000 00  000000


Q ss_pred             eecCcccEEEeeeccCCcEEEEee-cCCeEEEEecCCCeeeeeecccccceEEEE-EEcCCCcEEEEeecCCeEEEEEE
Q psy17610        437 IMILPSMIMSAAYHPSEVQLITCS-TNKMIDYWETCDGSIIRSLEGSDVAAVNCV-DFVDDGKYFLTGGADQIVKICLY  513 (515)
Q Consensus       437 ~~~~~~~i~~~~~s~~~~~l~~~~-~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~-~~s~~~~~l~s~~~dg~v~iw~~  513 (515)
                      .......+..+.+++++..++.++ .++.|++||..+++++..+..++...|.++ +|+|+|++|++|+ |+.|+||++
T Consensus       351 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~  428 (435)
T 4e54_B          351 AWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQ  428 (435)
T ss_dssp             EECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCC
T ss_pred             EEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEEC
Confidence            001112233334444444333332 346799999999999998876665888887 6999999999876 889999985

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=100.00  E-value=1.6e-41  Score=315.77  Aligned_cols=338  Identities=10%  Similarity=0.056  Sum_probs=234.2

Q ss_pred             EEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCC--ceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEc
Q psy17610        161 RISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSG--KLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKL  238 (515)
Q Consensus       161 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~  238 (515)
                      .+..+..+|.+++|+|++++|++++.|+.|++||+.++  +....+ .+|...|.+++|+|++++|++++.|+.|++||+
T Consensus         6 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~-~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~   84 (377)
T 3dwl_C            6 VLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTF-SDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEK   84 (377)
T ss_dssp             EEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCB-CCCSSCEEEEEECTTTCCEEEEETTSSEEEC--
T ss_pred             eEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEE-ecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEc
Confidence            34556778999999999999999999999999999988  555555 689999999999999999999999999999999


Q ss_pred             cCCc-eeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceE---EEEEE--cCccEEEEEEcCCCcEEEEE
Q psy17610        239 TRES-QSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTR---LIIMI--LPSMIMSAAYHPSEVQLITC  312 (515)
Q Consensus       239 ~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~---~~~~~--~~~~~~~~~~~~~~~~l~~~  312 (515)
                      .... ......+.+|...|.+++|+|++++|++++.|+.|++||+++++.   ...+.  +...+.+++|+|++++++++
T Consensus        85 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~  164 (377)
T 3dwl_C           85 RPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAG  164 (377)
T ss_dssp             ----CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEE
T ss_pred             CCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEE
Confidence            6544 345667788999999999999999999999999999999998763   45554  56789999999999999999


Q ss_pred             ECCCeEEEEeCCC------------------CceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCee---
Q psy17610        313 STNKMIDYWETCD------------------GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVP---  371 (515)
Q Consensus       313 ~~~~~i~~~d~~~------------------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~---  371 (515)
                      +.|+.|++||+..                  ++++..+  .+...+.+++|+|++++|++++.||.|++||+.+++.   
T Consensus       165 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~  242 (377)
T 3dwl_C          165 CADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY--PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPR  242 (377)
T ss_dssp             ESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC--CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEE
T ss_pred             eCCCEEEEEEEEecccCCCccccccccccchhhhhhcc--cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcce
Confidence            9999999999852                  4455555  3448899999999999999999999999999999877   


Q ss_pred             -eeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeec
Q psy17610        372 -CFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYH  450 (515)
Q Consensus       372 -~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s  450 (515)
                       +..+.+|...|.+++|+|++++|++++.++.+ +|+................  ....... .............+.|+
T Consensus       243 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~  318 (377)
T 3dwl_C          243 ALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGT--SKTSFTH-TGNTGEGREEEGPVSFT  318 (377)
T ss_dssp             ECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCC--CCCCBSS-SSSBCCCCCC-------
T ss_pred             eeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeecccc--ccccccc-ccccccccccccccccc
Confidence             78888999999999999999999988766555 7776532211100000000  0000000 00000000113334444


Q ss_pred             cCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCC-c---EEEEeecCCeEEEEEE
Q psy17610        451 PSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDG-K---YFLTGGADQIVKICLY  513 (515)
Q Consensus       451 ~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~-~---~l~s~~~dg~v~iw~~  513 (515)
                      +....+......|...       ........|. ..|+++++.+.. .   .|+||+.||.|++||+
T Consensus       319 ~~~~~~~~~~~~g~~~-------~~~~~~~~H~-~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl  377 (377)
T 3dwl_C          319 ALRSTFRNMDLKGSSQ-------SISSLPTVHQ-NMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL  377 (377)
T ss_dssp             -------------------------CCCSSSCS-SCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred             cccccccchhhccccc-------cccccCcccc-ceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence            4333332222222211       1112223454 899999976543 3   6999999999999984

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=100.00  E-value=8.8e-39  Score=299.23  Aligned_cols=283  Identities=17%  Similarity=0.297  Sum_probs=246.4

Q ss_pred             cCccC--eEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEe-cCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCC
Q psy17610        122 CHTSA--IYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISV-MNMICACIVFTYDGKAILSGWNDGFIRCFTPQSG  198 (515)
Q Consensus       122 ~h~~~--v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~  198 (515)
                      +|...  +.++.|++  ..+++++.|+.|++||+.+++....+.. |...|.+++|+|++++|++++.||.|++||+.++
T Consensus        89 ~~~~~~~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~  166 (401)
T 4aez_A           89 GIIDDYYLNLLDWSN--LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQ  166 (401)
T ss_dssp             TCCCCTTCBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred             CCcCCceEEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCC
Confidence            45544  45577775  4688899999999999999998887776 7889999999999999999999999999999999


Q ss_pred             ceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEE
Q psy17610        199 KLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCV  278 (515)
Q Consensus       199 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~  278 (515)
                      +....+ ..|...|.+++|+  ++.+++++.||.|++||++. .......+.+|...|.+++|+|+++++++++.|+.|+
T Consensus       167 ~~~~~~-~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~  242 (401)
T 4aez_A          167 TKLRTM-AGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRI-ANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQ  242 (401)
T ss_dssp             CEEEEE-CCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTS-SSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred             eEEEEe-cCCCCceEEEEEC--CCEEEEEcCCCCEEEEeccc-CcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEE
Confidence            998888 6999999999994  57999999999999999963 3445667888999999999999999999999999999


Q ss_pred             EEEcccceEEEEEE-cCccEEEEEEcCCCcE-EEEEE--CCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEE
Q psy17610        279 LWDLIKSTRLIIMI-LPSMIMSAAYHPSEVQ-LITCS--TNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLT  354 (515)
Q Consensus       279 iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~-l~~~~--~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~  354 (515)
                      +||+++++....+. +...+.+++|+|++.. +++++  .++.|++||+.+++.+..+..+  ..+.+++|+|+++++++
T Consensus       243 iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~~  320 (401)
T 4aez_A          243 IWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAG--SQVTSLIWSPHSKEIMS  320 (401)
T ss_dssp             EEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECS--SCEEEEEECSSSSEEEE
T ss_pred             EccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCC--CcEEEEEECCCCCeEEE
Confidence            99999988887775 4568999999997754 45544  6999999999999999988754  68999999999999999


Q ss_pred             --EcCCCeEEEEEccCCeee--eeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCc
Q psy17610        355 --GGADQIVKMWMYREGVPC--FVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELE  412 (515)
Q Consensus       355 --~~~dg~i~i~d~~~~~~~--~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  412 (515)
                        |+.||.|++||+.+++..  ..+.+|...|.+++|+|++++|++++.||.|++|++...+
T Consensus       321 ~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~  382 (401)
T 4aez_A          321 THGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGD  382 (401)
T ss_dssp             EECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC--
T ss_pred             EeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCc
Confidence              558999999999986544  4467899999999999999999999999999999998765

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=100.00  E-value=7.9e-39  Score=301.35  Aligned_cols=279  Identities=18%  Similarity=0.302  Sum_probs=242.3

Q ss_pred             CeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEE--ecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEE
Q psy17610        126 AIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRIS--VMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFI  203 (515)
Q Consensus       126 ~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~  203 (515)
                      ..+.|+||+++ . ++++.|++|+|||+.+++.+..+.  .|...|++++|+|+|++|++|+.||.|++||+++++.+..
T Consensus       107 y~~~l~wS~~n-~-lAvgld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~  184 (420)
T 4gga_A          107 YLNLVDWSSGN-V-LAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN  184 (420)
T ss_dssp             TCBCEEECTTS-E-EEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred             cceeEEECCCC-E-EEEEeCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEE
Confidence            46779999874 4 455569999999999999887766  5677899999999999999999999999999999999988


Q ss_pred             ecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcc
Q psy17610        204 IPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLI  283 (515)
Q Consensus       204 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~  283 (515)
                      + .+|...+.+++++  +..|++|+.|+.+++||.... ......+.+|...+..+.++|+++++++++.|+.+++|+..
T Consensus       185 ~-~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~-~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~  260 (420)
T 4gga_A          185 M-TSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVA-EHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSA  260 (420)
T ss_dssp             E-CCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSS-SCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESS
T ss_pred             E-eCCCCceEEEeeC--CCEEEEEeCCCceeEeeeccc-ceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeec
Confidence            8 7899999998885  679999999999999998643 44566788999999999999999999999999999999998


Q ss_pred             cceE-----EEEEEcCccEEEEEEcCCCc-EEEEE--ECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEE
Q psy17610        284 KSTR-----LIIMILPSMIMSAAYHPSEV-QLITC--STNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTG  355 (515)
Q Consensus       284 ~~~~-----~~~~~~~~~~~~~~~~~~~~-~l~~~--~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~  355 (515)
                      +++.     .....+...+.+++|+|.+. .++++  +.|+.|++||+.++++...+..+  ..+.++.|+|+++.++++
T Consensus       261 ~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~--~~v~~~~~~~~~~~lv~~  338 (420)
T 4gga_A          261 PGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH--SQVCSILWSPHYKELISG  338 (420)
T ss_dssp             CCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECS--SCEEEEEEETTTTEEEEE
T ss_pred             cccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccc--cceeeeeecCCCCeEEEE
Confidence            7642     22334556899999999765 44443  46899999999999999988876  678899999999988876


Q ss_pred             c--CCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCc
Q psy17610        356 G--ADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELE  412 (515)
Q Consensus       356 ~--~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  412 (515)
                      +  .|+.|++||+.+++++..+.+|...|++++|+|++++|++++.|++|++||+....
T Consensus       339 sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~  397 (420)
T 4gga_A          339 HGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELD  397 (420)
T ss_dssp             ECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSS
T ss_pred             EecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence            4  78999999999999999999999999999999999999999999999999987654

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=100.00  E-value=2.9e-38  Score=286.66  Aligned_cols=282  Identities=17%  Similarity=0.281  Sum_probs=244.9

Q ss_pred             EEEEEEecCCCEEEEEecCceEEEEECCCCceeEEe-eccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEE
Q psy17610         84 ISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLV-NTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRI  162 (515)
Q Consensus        84 v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~  162 (515)
                      .++|+||+++ +||+|. |++|+|||+++++.+... ..+|...|++++|+|+++++++++.|++|++||+++++.+..+
T Consensus        28 ~~~l~WS~~~-~lAvg~-D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~  105 (318)
T 4ggc_A           28 LNLVDWSSGN-VLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM  105 (318)
T ss_dssp             CBCEEECTTS-EEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred             ceEEEECCCC-EEEEEe-CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEe
Confidence            4689999876 777764 899999999997655443 4568889999999999999999999999999999999999999


Q ss_pred             EecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCc
Q psy17610        163 SVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRES  242 (515)
Q Consensus       163 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~  242 (515)
                      .+|...+.++  ++++..+++++.++.+++|+............+|...+..+.+.++++++++++.|+.|++||+....
T Consensus       106 ~~h~~~~~~~--~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~  183 (318)
T 4ggc_A          106 TSHSARVGSL--SWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGE  183 (318)
T ss_dssp             ECCSSCEEEE--EEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBT
T ss_pred             cCccceEEEe--ecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCc
Confidence            9999887654  55678999999999999999988765544447899999999999999999999999999999996543


Q ss_pred             --eeeEEeeccccCceEEEEEecCCCEEE---EEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEE--CC
Q psy17610        243 --QSLQCVLKEHTSSVSVIQIKSDSKEAM---SASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCS--TN  315 (515)
Q Consensus       243 --~~~~~~~~~~~~~v~~~~~~~~~~~l~---~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~  315 (515)
                        .........+...|..+.++|++..++   +++.+++|++||...............+..+.++|++..+++++  .|
T Consensus       184 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d  263 (318)
T 4ggc_A          184 GGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQ  263 (318)
T ss_dssp             TBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTT
T ss_pred             ccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCC
Confidence              223445667888999999999776543   55678999999999999999999999999999999999888765  68


Q ss_pred             CeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCe
Q psy17610        316 KMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGV  370 (515)
Q Consensus       316 ~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~  370 (515)
                      +.|++||+++++++..+.+|. ..|++++|+|+|++|++|+.||+|+|||+.+..
T Consensus       264 ~~i~iwd~~~~~~~~~l~gH~-~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~d  317 (318)
T 4ggc_A          264 NQLVIWKYPTMAKVAELKGHT-SRVLSLTMSPDGATVASAAADETLRLWRCFELD  317 (318)
T ss_dssp             CCEEEEETTTCCEEEEECCCS-SCEEEEEECTTSSCEEEEETTTEEEEECCSCCC
T ss_pred             CEEEEEECCCCcEEEEEcCCC-CCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence            999999999999999999876 899999999999999999999999999987643

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=100.00  E-value=6.9e-39  Score=286.68  Aligned_cols=249  Identities=16%  Similarity=0.282  Sum_probs=212.6

Q ss_pred             EEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCC-ceeEEeeccCccCeEEEEeCCC--CcEEEEEecCCcEEEEe
Q psy17610         76 YLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSG-FTLTLVNTCHTSAIYDLQFPVN--FSSVFATCSKNDIRIWS  152 (515)
Q Consensus        76 ~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~-~~~~~~~~~h~~~v~~~~~~~~--~~~l~~~~~d~~i~iw~  152 (515)
                      .+.+|.+.|.+++|+|+|++||+|+.|+.|++||++++ ......+.+|.++|.+++|+|+  ++.|++++.|++|++||
T Consensus         4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd   83 (297)
T 2pm7_B            4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWK   83 (297)
T ss_dssp             ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEE
T ss_pred             eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEE
Confidence            45679999999999999999999999999999999753 2455677889999999999864  78999999999999999


Q ss_pred             CCCCc--eeEEEEecCeEEEEEEEeeC--CCEEEEEeCCCeEEEEecCCCce--EEEecCCCCCCeEEEEEcCC------
Q psy17610        153 VRTLN--ELLRISVMNMICACIVFTYD--GKAILSGWNDGFIRCFTPQSGKL--KFIIPNAHNRGVTALAITQD------  220 (515)
Q Consensus       153 ~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~------  220 (515)
                      +++++  .+..+..|...|.+++|+|+  +.+|++++.|+.|++||++++..  ...+ .+|...|.+++|+|+      
T Consensus        84 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~~~~  162 (297)
T 2pm7_B           84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIII-DAHAIGVNSASWAPATIEEDG  162 (297)
T ss_dssp             BSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEE-ECCSSCEEEEEECCCC-----
T ss_pred             cCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeee-ecccCccceEeecCCcccccc
Confidence            99874  56677789999999999998  88999999999999999987632  2333 689999999999996      


Q ss_pred             -------CCEEEEecCCCcEEEEEccCCc--eeeEEeeccccCceEEEEEecCC---CEEEEEeCCCcEEEEEcccce--
Q psy17610        221 -------GTRLLSGGGEGQVRIWKLTRES--QSLQCVLKEHTSSVSVIQIKSDS---KEAMSASTDGTCVLWDLIKST--  286 (515)
Q Consensus       221 -------~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~d~~i~iwd~~~~~--  286 (515)
                             +++|++|+.|+.|++||++...  ......+.+|...|.+++|+|++   .+|++++.|++|++||+++..  
T Consensus       163 ~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~  242 (297)
T 2pm7_B          163 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGP  242 (297)
T ss_dssp             -------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSC
T ss_pred             cCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCc
Confidence                   5799999999999999996543  23556788999999999999984   789999999999999997642  


Q ss_pred             -EEEEE---EcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCC
Q psy17610        287 -RLIIM---ILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCD  325 (515)
Q Consensus       287 -~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~  325 (515)
                       ....+   .++..+.+++|+|++++|++++.|+.|++|+...
T Consensus       243 ~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~  285 (297)
T 2pm7_B          243 WKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL  285 (297)
T ss_dssp             CEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred             cceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence             11222   2356799999999999999999999999999763

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=100.00  E-value=9.1e-39  Score=293.96  Aligned_cols=287  Identities=13%  Similarity=0.132  Sum_probs=224.9

Q ss_pred             cCeEEEEEEEeeCCCEEEEEeCCC-------eEEEEecCCCce--------EE-EecCCCCCCeEEEEEcCCCCEEEEe-
Q psy17610        165 MNMICACIVFTYDGKAILSGWNDG-------FIRCFTPQSGKL--------KF-IIPNAHNRGVTALAITQDGTRLLSG-  227 (515)
Q Consensus       165 ~~~~v~~~~~~~~~~~l~~~~~dg-------~i~~~~~~~~~~--------~~-~~~~~~~~~v~~~~~~~~~~~l~~~-  227 (515)
                      ...||++++|+||+++|++|+.+.       .|++|++..+..        .. .....|...+.+++++  ++.+++| 
T Consensus        13 ~g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~   90 (365)
T 4h5i_A           13 VGYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGC   90 (365)
T ss_dssp             CSSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEEC
T ss_pred             CCCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEE
Confidence            456899999999999999987543       599999875431        11 1125778888888775  4466655 


Q ss_pred             ----------cCCCcEEEEEccCCceeeE--Ee-----eccccCceEEEEEecCCCEEEEEe--CCCcEEEEEcccceEE
Q psy17610        228 ----------GGEGQVRIWKLTRESQSLQ--CV-----LKEHTSSVSVIQIKSDSKEAMSAS--TDGTCVLWDLIKSTRL  288 (515)
Q Consensus       228 ----------~~d~~i~iw~~~~~~~~~~--~~-----~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~iwd~~~~~~~  288 (515)
                                +.|+.+++|++........  ..     ...+...+..++|+|||+++++++  .|++|++||+++++.+
T Consensus        91 ~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~  170 (365)
T 4h5i_A           91 NENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEK  170 (365)
T ss_dssp             CCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEE
T ss_pred             CCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEE
Confidence                      4578899999864432221  11     122345688999999999987654  6899999999999999


Q ss_pred             EEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEE-ecCCCccEEEEEEcCCCCEEEEEcCCC----eEEE
Q psy17610        289 IIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSL-EGSDVAAVNCVDFVDDGKYFLTGGADQ----IVKM  363 (515)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg----~i~i  363 (515)
                      ..+.+...|.+++|+|+++++++++.+ .+.+|+..+++.+... ...+...+.+++|+|+++++++++.|+    .+++
T Consensus       171 ~~~~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~  249 (365)
T 4h5i_A          171 FEIETRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTK  249 (365)
T ss_dssp             EEEECSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEE
T ss_pred             EEeCCCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEee
Confidence            999988999999999999999998755 5666666676665443 334457899999999999999998877    6888


Q ss_pred             EEccCCee----eeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeec
Q psy17610        364 WMYREGVP----CFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMI  439 (515)
Q Consensus       364 ~d~~~~~~----~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  439 (515)
                      |++.....    ...+.+|...|++++|+||+++||+|+.|+.|+|||+.+.+.                   ......+
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~-------------------~~~~~~g  310 (365)
T 4h5i_A          250 ISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSM-------------------SKIFKQA  310 (365)
T ss_dssp             EEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEE-------------------EEEETTS
T ss_pred             cccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcE-------------------EEEecCc
Confidence            99876543    345678999999999999999999999999999999876431                   1122346


Q ss_pred             CcccEEEeeeccCCcEEEEeecCCeEEEEecCCC
Q psy17610        440 LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDG  473 (515)
Q Consensus       440 ~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~  473 (515)
                      |...|++++|+|||++||+++.|++|+|||+...
T Consensus       311 H~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~  344 (365)
T 4h5i_A          311 HSFAITEVTISPDSTYVASVSAANTIHIIKLPLN  344 (365)
T ss_dssp             SSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred             ccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence            8889999999999999999999999999998643

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=100.00  E-value=5.5e-38  Score=284.86  Aligned_cols=277  Identities=17%  Similarity=0.297  Sum_probs=238.0

Q ss_pred             eEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEE--ecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEe
Q psy17610        127 IYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRIS--VMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFII  204 (515)
Q Consensus       127 v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~  204 (515)
                      .++|+||+++  +++++.|++|+|||+++++.+..+.  .|...|.+++|+|++++|++|+.||.|++||+++++.+..+
T Consensus        28 ~~~l~WS~~~--~lAvg~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~  105 (318)
T 4ggc_A           28 LNLVDWSSGN--VLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM  105 (318)
T ss_dssp             CBCEEECTTS--EEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred             ceEEEECCCC--EEEEEeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEe
Confidence            4679999985  4555679999999999999888776  56778999999999999999999999999999999998888


Q ss_pred             cCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEccc
Q psy17610        205 PNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIK  284 (515)
Q Consensus       205 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~  284 (515)
                       .+|...+.++.+  ++..+++++.++.+++|+.... ......+.+|...+..+.+.++++++++++.|+.|++||+++
T Consensus       106 -~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~  181 (318)
T 4ggc_A          106 -TSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVA-EHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAP  181 (318)
T ss_dssp             -ECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSS-SCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSC
T ss_pred             -cCccceEEEeec--CCCEEEEEecCCceEeeecCCC-ceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCC
Confidence             689888877665  4679999999999999998643 445667789999999999999999999999999999999987


Q ss_pred             ceE-----EEEEEcCccEEEEEEcCCCcEE---EEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEE-
Q psy17610        285 STR-----LIIMILPSMIMSAAYHPSEVQL---ITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTG-  355 (515)
Q Consensus       285 ~~~-----~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-  355 (515)
                      ++.     .........+..+.+.|++..+   ++++.++.|++||.............  ..+..+.|+|+++.++++ 
T Consensus       182 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~s  259 (318)
T 4ggc_A          182 GEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH--SQVCSILWSPHYKELISGH  259 (318)
T ss_dssp             BTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECS--SCEEEEEEETTTTEEEEEE
T ss_pred             CcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccce--eeeeeeeecccccceEEEE
Confidence            642     2233345678999999976543   34567899999999998887776654  678899999999888765 


Q ss_pred             -cCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCC
Q psy17610        356 -GADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPEL  411 (515)
Q Consensus       356 -~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~  411 (515)
                       +.|+.|++||+++++++..+.+|.+.|++++|+|++++|++++.||+|++||+.+.
T Consensus       260 g~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~  316 (318)
T 4ggc_A          260 GFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL  316 (318)
T ss_dssp             CTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred             EcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence             47999999999999999999999999999999999999999999999999998654

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=100.00  E-value=2.7e-37  Score=322.87  Aligned_cols=375  Identities=11%  Similarity=0.014  Sum_probs=281.8

Q ss_pred             ccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCC-CceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCc
Q psy17610        121 TCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRT-LNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGK  199 (515)
Q Consensus       121 ~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~  199 (515)
                      .+|...+.++.|+++ ..++++..++.+.||.+.. +.....+..+. .+...+|+|+|+.|+.+ .++.|.+|++...+
T Consensus       200 ~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~-~~~~i~~~d~~~~~  276 (1045)
T 1k32_A          200 VDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFS-KGGSIYIFNPDTEK  276 (1045)
T ss_dssp             ECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEEE-ETTEEEEECTTTCC
T ss_pred             cCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEEE-eCCEEEEecCCceE
Confidence            678889999999988 5556666689999998753 44455555444 34567999999988887 48999999995554


Q ss_pred             eEEEecCC-----------CCCCeEEEEEc-CCCCEEEEecCCCcEEEEEccCCceeeEEeeccccC-ceEEEEEecCCC
Q psy17610        200 LKFIIPNA-----------HNRGVTALAIT-QDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTS-SVSVIQIKSDSK  266 (515)
Q Consensus       200 ~~~~~~~~-----------~~~~v~~~~~~-~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~  266 (515)
                      .. .+ ..           |...+..++|+ |+|+.|++++ ++.+.+|+.....   ...+..|.. .+..++|+ +++
T Consensus       277 l~-~l-~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~~s-dg~  349 (1045)
T 1k32_A          277 IE-KI-EIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTY---VLKVPEPLRIRYVRRGGD-TKV  349 (1045)
T ss_dssp             EE-EC-CCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSB---EEECSCCSCEEEEEECSS-SEE
T ss_pred             ee-ee-ccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCc---eEEccCCCcceEEeeeEc-CCC
Confidence            44 44 22           34468999999 9999999887 7899999985432   223556666 89999999 999


Q ss_pred             EEEEEeCCCcEE-EEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEE
Q psy17610        267 EAMSASTDGTCV-LWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDF  345 (515)
Q Consensus       267 ~l~~~~~d~~i~-iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~  345 (515)
                      .+++++.++.+. +||+..++......+...+..++|+|+++++++++.++.+++||+.+++.......+. ..+..++|
T Consensus       350 ~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~-~~v~~~~~  428 (1045)
T 1k32_A          350 AFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSRE-AMITDFTI  428 (1045)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSS-SCCCCEEE
T ss_pred             eEEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCC-CCccceEE
Confidence            999999888888 8999877655444444678999999999999999999999999999998877776554 77889999


Q ss_pred             cCCCCEEEEEcCCC----------eEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCcc
Q psy17610        346 VDDGKYFLTGGADQ----------IVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDV  415 (515)
Q Consensus       346 ~~~~~~l~~~~~dg----------~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~  415 (515)
                      +|||++|++++.++          .|++||+.+++ ...+..|...+..++|+|||++|++++.++...+|+........
T Consensus       429 SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~  507 (1045)
T 1k32_A          429 SDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSF  507 (1045)
T ss_dssp             CTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEEC
T ss_pred             CCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhcccccc
Confidence            99999998887644          89999999887 66777888889999999999999999998888888865332111


Q ss_pred             CCCccccee-----------------------eecccccccceeeecCcccEEEeeeccCCcEEEE-------------e
Q psy17610        416 GDSRSLSSK-----------------------ISRSTARSTRLIIMILPSMIMSAAYHPSEVQLIT-------------C  459 (515)
Q Consensus       416 ~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~-------------~  459 (515)
                      .........                       ............+..+...+..++++||++++++             .
T Consensus       508 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~  587 (1045)
T 1k32_A          508 EVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGA  587 (1045)
T ss_dssp             CSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCC
T ss_pred             ccCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCccccccccc
Confidence            000000000                       0000000111222335577899999999988875             1


Q ss_pred             ecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEEEEEE
Q psy17610        460 STNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLY  513 (515)
Q Consensus       460 ~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~  513 (515)
                      .....|++||+.+++... +.    ..+.+++|||||++|++++.| .|++||.
T Consensus       588 ~~~~~l~~~d~~~~~~~~-l~----~~v~~~~~S~DG~~l~~~~~~-~i~~~d~  635 (1045)
T 1k32_A          588 PEKGVLLKYDVKTRKVTE-VK----NNLTDLRLSADRKTVMVRKDD-GKIYTFP  635 (1045)
T ss_dssp             CCCEEEEEEETTTCCEEE-EE----EEEEEEEECTTSCEEEEEETT-SCEEEEE
T ss_pred             CCCceEEEEECCCCcEEE-ee----cCcceEEECCCCCEEEEEcCC-cEEEEeC
Confidence            235578999998887533 22    468899999999999998877 7999996

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.2e-39  Score=309.35  Aligned_cols=342  Identities=13%  Similarity=0.127  Sum_probs=259.8

Q ss_pred             CccCC-CCceEEEecCCCCeEEEEcCCCCCCcccccccceEEeeccccccccccccccccccCcceeeeccceEEEEEec
Q psy17610          1 MKTTP-NDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMGCYGKLIKKKVSTKLKDVNAEDVSLYSAGVTALYLLK   79 (515)
Q Consensus         1 ~~~~~-~~~~~~~g~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (515)
                      |+|+| ++++|++|+.+|.|.+||+.+..                                .   ...+    ......+
T Consensus        69 ~~~s~~~~~~l~s~s~dg~v~vwd~~~~~--------------------------------~---~~~~----~~~~~~~  109 (437)
T 3gre_A           69 SAVSPGETPYLITGSDQGVIKIWNLKEII--------------------------------V---GEVY----SSSLTYD  109 (437)
T ss_dssp             EEEECSSSCEEEEEETTSEEEEEEHHHHH--------------------------------T---TCCC----SCSEEEE
T ss_pred             EEECCCCCCEEEEecCCceEEEeECcccc--------------------------------c---Cccc----ceeeecc
Confidence            46788 88888888888899998865410                                0   0000    0111225


Q ss_pred             CCCcEEEEEEecCCCEEEEEecCceEEEEECC---CCceeEEe---------ecc--CccCeEEEE--eCCCCcEEEEEe
Q psy17610         80 DDSGISSLQYNPVNNKVFVGTVNCEIFLIDMN---SGFTLTLV---------NTC--HTSAIYDLQ--FPVNFSSVFATC  143 (515)
Q Consensus        80 ~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~---~~~~~~~~---------~~~--h~~~v~~~~--~~~~~~~l~~~~  143 (515)
                      |.+.|++++|+|++++|++|+.||.|++||++   ++......         +..  +...+.++.  ++|++..+++++
T Consensus       110 h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  189 (437)
T 3gre_A          110 CSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALT  189 (437)
T ss_dssp             CSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEE
T ss_pred             CCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEe
Confidence            99999999999999999999999999999995   33222211         111  455666766  567899999999


Q ss_pred             cCCcEEEEeCCCCceeEEEEe--cCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcC--
Q psy17610        144 SKNDIRIWSVRTLNELLRISV--MNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQ--  219 (515)
Q Consensus       144 ~d~~i~iw~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--  219 (515)
                      .|+.|++||+++++.+..+..  |...|.+++|+|++++|++++.||.|++||+++++.+..+...|..+|.+++|+|  
T Consensus       190 ~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~  269 (437)
T 3gre_A          190 NLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFY  269 (437)
T ss_dssp             TTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTT
T ss_pred             CCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEecccc
Confidence            999999999999999999998  8899999999999999999999999999999999998887557888999996664  


Q ss_pred             --CCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccE
Q psy17610        220 --DGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMI  297 (515)
Q Consensus       220 --~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~  297 (515)
                        ++.+|++++.||.|++||++  .......+.+|...+..+.|+|+++.+    .+..           .....+...+
T Consensus       270 s~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~-----------~~~~~~~~~v  332 (437)
T 3gre_A          270 GKNSVIVVGGSSKTFLTIWNFV--KGHCQYAFINSDEQPSMEHFLPIEKGL----EELN-----------FCGIRSLNAL  332 (437)
T ss_dssp             CTTEEEEEEESTTEEEEEEETT--TTEEEEEEESSSSCCCGGGGSCBCSSG----GGCC-----------CCCCCSGGGG
T ss_pred             CCCccEEEEEcCCCcEEEEEcC--CCcEEEEEEcCCCCCccceeccccccc----ccce-----------ecccccCCce
Confidence              67799999999999999994  456677788898888888888887655    1111           0001244578


Q ss_pred             EEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCC--CccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeec
Q psy17610        298 MSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSD--VAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVG  375 (515)
Q Consensus       298 ~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~  375 (515)
                      .+++|+ +++++++++.|+.|++||+.+++....+..+.  ...+....++++..+++..        ++..........
T Consensus       333 ~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~  403 (437)
T 3gre_A          333 STISVS-NDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRK--------MKRTSTHSVDDS  403 (437)
T ss_dssp             CCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEE--------CC----------
T ss_pred             EEEEEC-CceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEe--------cccccccccCcc
Confidence            899999 77899999999999999999999988887652  2455666677766555544        233334444556


Q ss_pred             cCCCCCeeEEEECCC--CcEEEEEeCCCcEEEEe
Q psy17610        376 IGHAASITKIKISPD--KKVIVSVSADGGIFLWT  407 (515)
Q Consensus       376 ~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~iw~  407 (515)
                      ..|...|++++|+++  +.+|++++.||.|++|+
T Consensus       404 ~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~  437 (437)
T 3gre_A          404 LYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ  437 (437)
T ss_dssp             ---CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred             cccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence            679999999999998  88999999999999995

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=100.00  E-value=9.6e-39  Score=304.29  Aligned_cols=285  Identities=11%  Similarity=0.162  Sum_probs=232.5

Q ss_pred             cCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCce----------eEEeeccCc------------cCeEEEEeCCCC
Q psy17610         79 KDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFT----------LTLVNTCHT------------SAIYDLQFPVNF  136 (515)
Q Consensus        79 ~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~----------~~~~~~~h~------------~~v~~~~~~~~~  136 (515)
                      .|.+.|++++|+|+|++||+|+.||.|++||+.++..          +...+.+|.            +.|.+++|+|++
T Consensus        26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~  105 (447)
T 3dw8_B           26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK  105 (447)
T ss_dssp             CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred             cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence            4679999999999999999999999999999987542          455677898            889999999998


Q ss_pred             --cEEEEEecCCcEEEEeCCCCcee---------------------------------------EE-EEecCeEEEEEEE
Q psy17610        137 --SSVFATCSKNDIRIWSVRTLNEL---------------------------------------LR-ISVMNMICACIVF  174 (515)
Q Consensus       137 --~~l~~~~~d~~i~iw~~~~~~~~---------------------------------------~~-~~~~~~~v~~~~~  174 (515)
                        ..+++++.|+.|++||+.+++..                                       .. ..+|...|.+++|
T Consensus       106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~  185 (447)
T 3dw8_B          106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI  185 (447)
T ss_dssp             SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred             CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence              78999999999999999764432                                       12 2468889999999


Q ss_pred             eeCCCEEEEEeCCCeEEEEecCC-CceEEEe------cCCCCCCeEEEEEcCCC-CEEEEecCCCcEEEEEccCCcee--
Q psy17610        175 TYDGKAILSGWNDGFIRCFTPQS-GKLKFII------PNAHNRGVTALAITQDG-TRLLSGGGEGQVRIWKLTRESQS--  244 (515)
Q Consensus       175 ~~~~~~l~~~~~dg~i~~~~~~~-~~~~~~~------~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iw~~~~~~~~--  244 (515)
                      +|++++|+++ .|+.|++||+++ ++....+      ...|...|.+++|+|++ ++|++|+.||.|++||++.....  
T Consensus       186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~  264 (447)
T 3dw8_B          186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR  264 (447)
T ss_dssp             CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred             cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence            9999999998 799999999994 4444322      35799999999999998 99999999999999999644321  


Q ss_pred             eEEeeccccC------------ceEEEEEecCCCEEEEEeCCCcEEEEEccc-ceEEEEEEcCcc---------------
Q psy17610        245 LQCVLKEHTS------------SVSVIQIKSDSKEAMSASTDGTCVLWDLIK-STRLIIMILPSM---------------  296 (515)
Q Consensus       245 ~~~~~~~~~~------------~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~---------------  296 (515)
                      ....+..|..            .|.+++|+|++++|++++. +.|++||+++ ++.+..+..+..               
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~  343 (447)
T 3dw8_B          265 HSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIF  343 (447)
T ss_dssp             TCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGG
T ss_pred             eeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccc
Confidence            1455666665            8999999999999999999 9999999987 777766665543               


Q ss_pred             -EEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEec-------------------------------CCCccEEEEE
Q psy17610        297 -IMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEG-------------------------------SDVAAVNCVD  344 (515)
Q Consensus       297 -~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~-------------------------------~~~~~i~~~~  344 (515)
                       +..++|+|++++|++++.|+.|++||+.+++.+.....                               .....+..++
T Consensus       344 ~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  423 (447)
T 3dw8_B          344 DKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTA  423 (447)
T ss_dssp             CCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEE
T ss_pred             cceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccccCCceeEEE
Confidence             23499999999999999999999999999887632211                               1124678899


Q ss_pred             EcCCCCEEEEEcCCCeEEEEEc
Q psy17610        345 FVDDGKYFLTGGADQIVKMWMY  366 (515)
Q Consensus       345 ~~~~~~~l~~~~~dg~i~i~d~  366 (515)
                      |+|++++||+++.++ +++|..
T Consensus       424 ~~p~~~~la~~~~~~-~~~~~~  444 (447)
T 3dw8_B          424 WHPKENIIAVATTNN-LYIFQD  444 (447)
T ss_dssp             ECSSSSEEEEECSSC-EEEEEC
T ss_pred             ECCCCCEEEEEecce-eeeecc
Confidence            999999999998775 777764

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=100.00  E-value=4.6e-38  Score=288.46  Aligned_cols=283  Identities=14%  Similarity=0.125  Sum_probs=245.2

Q ss_pred             EeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCc---eeEEEEecCeEEEEEEEeeCCC-EEEEEeCCCeEEEE
Q psy17610        118 LVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLN---ELLRISVMNMICACIVFTYDGK-AILSGWNDGFIRCF  193 (515)
Q Consensus       118 ~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~---~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~  193 (515)
                      .+..+|.+.|.+++|+|++++|++++.|+.|++|++.+++   ....+..|...|.+++|+|+++ +|++++.||.|++|
T Consensus         5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~w   84 (342)
T 1yfq_A            5 QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKV   84 (342)
T ss_dssp             ECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEE
T ss_pred             ecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEE
Confidence            3456799999999999999999999999999999999877   3556668999999999999999 99999999999999


Q ss_pred             ec-CCCceEEEecCC--CCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCc-------eeeEEeeccccCceEEEEEec
Q psy17610        194 TP-QSGKLKFIIPNA--HNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRES-------QSLQCVLKEHTSSVSVIQIKS  263 (515)
Q Consensus       194 ~~-~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~-------~~~~~~~~~~~~~v~~~~~~~  263 (515)
                      |+ .+++. ..+ ..  |...|.+++|+| ++.+++++.|+.|++||++...       ......+. |...|.+++|+|
T Consensus        85 d~~~~~~~-~~~-~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~  160 (342)
T 1yfq_A           85 DLIGSPSF-QAL-TNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNS  160 (342)
T ss_dssp             CSSSSSSE-EEC-BSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECS
T ss_pred             EeccCCce-Eec-cccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecC
Confidence            99 88766 334 57  999999999999 9999999999999999985300       33333444 888999999998


Q ss_pred             CCCEEEEEeCCCcEEEEEccc-ceE---EEEEEcCccEEEEEEcC-CCcEEEEEECCCeEEEEeCCCC------ceEEEE
Q psy17610        264 DSKEAMSASTDGTCVLWDLIK-STR---LIIMILPSMIMSAAYHP-SEVQLITCSTNKMIDYWETCDG------SIIRSL  332 (515)
Q Consensus       264 ~~~~l~~~~~d~~i~iwd~~~-~~~---~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~i~~~d~~~~------~~~~~~  332 (515)
                      ++  +++++.|+.|++||+++ +..   .....+...+.+++|+| +++++++++.++.+++|++...      +....+
T Consensus       161 ~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~  238 (342)
T 1yfq_A          161 SR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAF  238 (342)
T ss_dssp             SE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEE
T ss_pred             Cc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceee
Confidence            87  99999999999999987 442   22334556899999999 9999999999999999999887      777788


Q ss_pred             ecCC--------CccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCC-CCCeeEEEECCCCcEEEEEeCCCc-
Q psy17610        333 EGSD--------VAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGH-AASITKIKISPDKKVIVSVSADGG-  402 (515)
Q Consensus       333 ~~~~--------~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~dg~-  402 (515)
                      ..+.        ...+.+++|+|++++|++++.||.|++||+.+++.+..+.+| ...|++++  |++++|++++.||. 
T Consensus       239 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~~  316 (342)
T 1yfq_A          239 RCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDTF  316 (342)
T ss_dssp             ECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTHH
T ss_pred             ecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCCcc
Confidence            7764        238999999999999999999999999999999999999998 99999999  99999999999998 


Q ss_pred             EEEEeC
Q psy17610        403 IFLWTF  408 (515)
Q Consensus       403 i~iw~~  408 (515)
                      .+.|..
T Consensus       317 ~~~~~~  322 (342)
T 1yfq_A          317 KTNAAI  322 (342)
T ss_dssp             HHCSSS
T ss_pred             cccccc
Confidence            555543

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=100.00  E-value=1.2e-38  Score=303.56  Aligned_cols=282  Identities=14%  Similarity=0.178  Sum_probs=235.8

Q ss_pred             CccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCc-----------eeEEEEecC------------eEEEEEEEeeCC-
Q psy17610        123 HTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLN-----------ELLRISVMN------------MICACIVFTYDG-  178 (515)
Q Consensus       123 h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~-----------~~~~~~~~~------------~~v~~~~~~~~~-  178 (515)
                      |.+.|.+++|+|++++|++++.|+.|+|||+.+++           ....+.+|.            ..|.+++|+|++ 
T Consensus        27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~  106 (447)
T 3dw8_B           27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKN  106 (447)
T ss_dssp             GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred             ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCC
Confidence            78899999999999999999999999999999877           477888898            789999999998 


Q ss_pred             -CEEEEEeCCCeEEEEecCCCceE---------------------------------------EEecCCCCCCeEEEEEc
Q psy17610        179 -KAILSGWNDGFIRCFTPQSGKLK---------------------------------------FIIPNAHNRGVTALAIT  218 (515)
Q Consensus       179 -~~l~~~~~dg~i~~~~~~~~~~~---------------------------------------~~~~~~~~~~v~~~~~~  218 (515)
                       ..|++++.|+.|++||+.+++..                                       ..+..+|...|.+++|+
T Consensus       107 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~  186 (447)
T 3dw8_B          107 AAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISIN  186 (447)
T ss_dssp             SSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEEC
T ss_pred             cceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEc
Confidence             79999999999999998775432                                       13336899999999999


Q ss_pred             CCCCEEEEecCCCcEEEEEccCCceeeEE-------eeccccCceEEEEEecCC-CEEEEEeCCCcEEEEEcccceE---
Q psy17610        219 QDGTRLLSGGGEGQVRIWKLTRESQSLQC-------VLKEHTSSVSVIQIKSDS-KEAMSASTDGTCVLWDLIKSTR---  287 (515)
Q Consensus       219 ~~~~~l~~~~~d~~i~iw~~~~~~~~~~~-------~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~---  287 (515)
                      |++++|++| .|+.|++||++.. .....       .+.+|...|.+++|+|++ +++++++.||.|++||+++++.   
T Consensus       187 ~~~~~l~s~-~d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~  264 (447)
T 3dw8_B          187 SDYETYLSA-DDLRINLWHLEIT-DRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR  264 (447)
T ss_dssp             TTSSEEEEE-CSSEEEEEETTEE-EEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred             CCCCEEEEe-CCCeEEEEECCCC-CceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence            999999998 7999999999632 22222       366899999999999998 9999999999999999998875   


Q ss_pred             -EEEEEcCc-------------cEEEEEEcCCCcEEEEEECCCeEEEEeCCC-CceEEEEecCCCc--------------
Q psy17610        288 -LIIMILPS-------------MIMSAAYHPSEVQLITCSTNKMIDYWETCD-GSIIRSLEGSDVA--------------  338 (515)
Q Consensus       288 -~~~~~~~~-------------~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~--------------  338 (515)
                       ...+..+.             .+.+++|+|+++++++++. +.|++||++. ++++..+..+...              
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~  343 (447)
T 3dw8_B          265 HSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIF  343 (447)
T ss_dssp             TCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGG
T ss_pred             eeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccc
Confidence             55555543             7999999999999999999 9999999997 8888888776310              


Q ss_pred             cEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeec--------------------------------cCCCCCeeEEE
Q psy17610        339 AVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVG--------------------------------IGHAASITKIK  386 (515)
Q Consensus       339 ~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~--------------------------------~~~~~~i~~~~  386 (515)
                      .+..++|+|++++|++|+.||.|++||+.+++.+...                                ..+...|..++
T Consensus       344 ~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  423 (447)
T 3dw8_B          344 DKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTA  423 (447)
T ss_dssp             CCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEE
T ss_pred             cceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccccCCceeEEE
Confidence            1234899999999999999999999999987664311                                13345789999


Q ss_pred             ECCCCcEEEEEeCCCcEEEEeC
Q psy17610        387 ISPDKKVIVSVSADGGIFLWTF  408 (515)
Q Consensus       387 ~~~~~~~l~~~~~dg~i~iw~~  408 (515)
                      |+|++++||+++.++ +++|.-
T Consensus       424 ~~p~~~~la~~~~~~-~~~~~~  444 (447)
T 3dw8_B          424 WHPKENIIAVATTNN-LYIFQD  444 (447)
T ss_dssp             ECSSSSEEEEECSSC-EEEEEC
T ss_pred             ECCCCCEEEEEecce-eeeecc
Confidence            999999999998775 777763

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=100.00  E-value=6.7e-39  Score=289.34  Aligned_cols=250  Identities=15%  Similarity=0.215  Sum_probs=208.7

Q ss_pred             EEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCce-eEEeeccCccCeEEEEeCC--CCcEEEEEecCCcEEEE
Q psy17610         75 LYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFT-LTLVNTCHTSAIYDLQFPV--NFSSVFATCSKNDIRIW  151 (515)
Q Consensus        75 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~-~~~~~~~h~~~v~~~~~~~--~~~~l~~~~~d~~i~iw  151 (515)
                      ..+.+|.+.|++++|+|+|++||+|+.|++|++||+.++.. ....+.+|.++|.+++|+|  +++.|++++.|++|++|
T Consensus         7 ~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iW   86 (316)
T 3bg1_A            7 TVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIW   86 (316)
T ss_dssp             -------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEE
T ss_pred             eecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEE
Confidence            34568999999999999999999999999999999987643 4556788999999999986  47899999999999999


Q ss_pred             eCCCCc--eeEEEEecCeEEEEEEEeeC--CCEEEEEeCCCeEEEEecCCCceE--EEecCCCCCCeEEEEEcCC-----
Q psy17610        152 SVRTLN--ELLRISVMNMICACIVFTYD--GKAILSGWNDGFIRCFTPQSGKLK--FIIPNAHNRGVTALAITQD-----  220 (515)
Q Consensus       152 ~~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~-----  220 (515)
                      |+++++  ....+.+|...|.+++|+|+  +.+|++++.|+.|++||+..+...  .....+|...+.+++|+|+     
T Consensus        87 d~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~  166 (316)
T 3bg1_A           87 REENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGS  166 (316)
T ss_dssp             CCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC--
T ss_pred             ECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcc
Confidence            999874  56677789999999999998  789999999999999999876432  2334689999999999997     


Q ss_pred             ------------CCEEEEecCCCcEEEEEccCC-ceeeEEeeccccCceEEEEEecCC----CEEEEEeCCCcEEEEEcc
Q psy17610        221 ------------GTRLLSGGGEGQVRIWKLTRE-SQSLQCVLKEHTSSVSVIQIKSDS----KEAMSASTDGTCVLWDLI  283 (515)
Q Consensus       221 ------------~~~l~~~~~d~~i~iw~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~----~~l~~~~~d~~i~iwd~~  283 (515)
                                  +++|++|+.|+.|++||++.. .......+.+|...|.+++|+|++    .+|++++.|++|++|++.
T Consensus       167 ~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~  246 (316)
T 3bg1_A          167 LIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCD  246 (316)
T ss_dssp             ----CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECS
T ss_pred             ccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEcc
Confidence                        468999999999999999633 234566788999999999999986    789999999999999987


Q ss_pred             cc---e--EEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCC
Q psy17610        284 KS---T--RLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETC  324 (515)
Q Consensus       284 ~~---~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~  324 (515)
                      +.   +  ......+...+.+++|+|++++|++++.|+.|++|+..
T Consensus       247 ~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~  292 (316)
T 3bg1_A          247 DASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES  292 (316)
T ss_dssp             STTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred             CccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence            62   1  11223456789999999999999999999999999975

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=100.00  E-value=2.3e-38  Score=291.40  Aligned_cols=298  Identities=12%  Similarity=0.112  Sum_probs=230.7

Q ss_pred             EEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCc---eeEEeeccCccCeEEEEeCC--CCcEEEEEecCCcEEE
Q psy17610         76 YLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGF---TLTLVNTCHTSAIYDLQFPV--NFSSVFATCSKNDIRI  150 (515)
Q Consensus        76 ~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~---~~~~~~~~h~~~v~~~~~~~--~~~~l~~~~~d~~i~i  150 (515)
                      .+.+|.+.|++++|+|++++||+|+.||.|++||+.++.   .....+.+|..+|.+++|+|  ++.+|++++.|+.|++
T Consensus         6 ~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~v   85 (351)
T 3f3f_A            6 FDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKL   85 (351)
T ss_dssp             EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEE
T ss_pred             cCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEE
Confidence            456899999999999999999999999999999998753   34556678999999999999  6899999999999999


Q ss_pred             EeCCCC---------ceeEEEEecCeEEEEEEEeeC--CCEEEEEeCCCeEEEEecCCCceEEEe------------cCC
Q psy17610        151 WSVRTL---------NELLRISVMNMICACIVFTYD--GKAILSGWNDGFIRCFTPQSGKLKFII------------PNA  207 (515)
Q Consensus       151 w~~~~~---------~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~~~~~~~~~~~~~~------------~~~  207 (515)
                      ||++++         +.+..+..|...|.+++|+|+  +++|++++.||.|++||+.+++....+            ...
T Consensus        86 wd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  165 (351)
T 3f3f_A           86 WEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPAN  165 (351)
T ss_dssp             EEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSS
T ss_pred             EecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCC
Confidence            999887         457778889999999999999  999999999999999999887643221            126


Q ss_pred             CCCCeEEEEEcCC---CCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCC----CEEEEEeCCCcEEEE
Q psy17610        208 HNRGVTALAITQD---GTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDS----KEAMSASTDGTCVLW  280 (515)
Q Consensus       208 ~~~~v~~~~~~~~---~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~l~~~~~d~~i~iw  280 (515)
                      |...+.+++|+|+   +..+++++.++.+.+|+...........+.+|...|.+++|+|++    ++|++++.||.|++|
T Consensus       166 ~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iw  245 (351)
T 3f3f_A          166 HLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIF  245 (351)
T ss_dssp             CSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEE
T ss_pred             cccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEE
Confidence            7889999999997   899999999999988887666666677888999999999999998    899999999999999


Q ss_pred             EcccceEEEEEEcC-ccEEEEEEcCCCcEEEE----EECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEE
Q psy17610        281 DLIKSTRLIIMILP-SMIMSAAYHPSEVQLIT----CSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTG  355 (515)
Q Consensus       281 d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~----~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~  355 (515)
                      |++.+......... .........+.......    +.....+.+|+....+.+..+..+. ..|++++|+|++++|+++
T Consensus       246 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~s~~~~~l~s~  324 (351)
T 3f3f_A          246 KITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHN-GEVWSVSWNLTGTILSSA  324 (351)
T ss_dssp             EEEECC---------------------------------------CCSEEEEEEEEECTTS-SCEEEEEECSSSCCEEEE
T ss_pred             eCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEeccc-ccEEEEEEcCCCCEEEEe
Confidence            99876544332221 12222223333333322    2334456666666677778887766 889999999999999999


Q ss_pred             cCCCeEEEEEccCCeeeee
Q psy17610        356 GADQIVKMWMYREGVPCFV  374 (515)
Q Consensus       356 ~~dg~i~i~d~~~~~~~~~  374 (515)
                      +.||.|++|++.+++....
T Consensus       325 ~~dg~v~iw~~~~~~~~~~  343 (351)
T 3f3f_A          325 GDDGKVRLWKATYSNEFKC  343 (351)
T ss_dssp             ETTSCEEEEEECTTSCEEE
T ss_pred             cCCCcEEEEecCcCcchhh
Confidence            9999999999988755443

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=100.00  E-value=6.7e-38  Score=280.28  Aligned_cols=249  Identities=20%  Similarity=0.256  Sum_probs=211.3

Q ss_pred             EEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCC--ceEEEecCCCCCCeEEEEEcC--CCCEEEEecCCCcEEE
Q psy17610        160 LRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSG--KLKFIIPNAHNRGVTALAITQ--DGTRLLSGGGEGQVRI  235 (515)
Q Consensus       160 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~--~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~i  235 (515)
                      ..+.+|...|.+++|+|+|++|++++.|+.|++||+.++  +....+ .+|..+|.+++|++  ++++|++|+.|++|++
T Consensus         3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l-~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~i   81 (297)
T 2pm7_B            3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTL-TGHEGPVWRVDWAHPKFGTILASCSYDGKVMI   81 (297)
T ss_dssp             EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEE-CCCSSCEEEEEECCGGGCSEEEEEETTTEEEE
T ss_pred             eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEE-ccccCCeEEEEecCCCcCCEEEEEcCCCEEEE
Confidence            345679999999999999999999999999999999753  556666 69999999999986  3899999999999999


Q ss_pred             EEccCCceeeEEeeccccCceEEEEEecC--CCEEEEEeCCCcEEEEEcccce---EEEEEEcCccEEEEEEcCC-----
Q psy17610        236 WKLTRESQSLQCVLKEHTSSVSVIQIKSD--SKEAMSASTDGTCVLWDLIKST---RLIIMILPSMIMSAAYHPS-----  305 (515)
Q Consensus       236 w~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~-----  305 (515)
                      ||+..........+.+|...|.+++|+|+  +.+|++++.|++|++||+++..   ......+...+.+++|+|+     
T Consensus        82 Wd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~  161 (297)
T 2pm7_B           82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEED  161 (297)
T ss_dssp             EEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC----
T ss_pred             EEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCccccc
Confidence            99975544555667889999999999997  8899999999999999998653   2223345568999999997     


Q ss_pred             --------CcEEEEEECCCeEEEEeCCCCc----eEEEEecCCCccEEEEEEcCCC---CEEEEEcCCCeEEEEEccCCe
Q psy17610        306 --------EVQLITCSTNKMIDYWETCDGS----IIRSLEGSDVAAVNCVDFVDDG---KYFLTGGADQIVKMWMYREGV  370 (515)
Q Consensus       306 --------~~~l~~~~~~~~i~~~d~~~~~----~~~~~~~~~~~~i~~~~~~~~~---~~l~~~~~dg~i~i~d~~~~~  370 (515)
                              +++|++++.|+.|++||+++++    ....+..|. ..|.+++|+|++   ++|++++.|+.|++||+++..
T Consensus       162 ~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~-~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~  240 (297)
T 2pm7_B          162 GEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS-DWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQ  240 (297)
T ss_dssp             --------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCS-SCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTT
T ss_pred             ccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCC-CceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCC
Confidence                    5799999999999999998766    455666665 899999999984   899999999999999997642


Q ss_pred             ---eeeec--cCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCC
Q psy17610        371 ---PCFVG--IGHAASITKIKISPDKKVIVSVSADGGIFLWTFPE  410 (515)
Q Consensus       371 ---~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~  410 (515)
                         ....+  ..|...|.+++|+|++++|++++.|+.|++|+...
T Consensus       241 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~  285 (297)
T 2pm7_B          241 GPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL  285 (297)
T ss_dssp             SCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred             CccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence               12223  57889999999999999999999999999999753

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=100.00  E-value=3.1e-38  Score=289.58  Aligned_cols=279  Identities=11%  Similarity=0.105  Sum_probs=242.4

Q ss_pred             cCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCc--eeEEeeccCccCeEEEEeCCCCc-EEEEEecCCcEEEEeC-C
Q psy17610         79 KDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGF--TLTLVNTCHTSAIYDLQFPVNFS-SVFATCSKNDIRIWSV-R  154 (515)
Q Consensus        79 ~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~h~~~v~~~~~~~~~~-~l~~~~~d~~i~iw~~-~  154 (515)
                      +|.+.|++++|+|++++|++++.|+.|++|++.++.  .......+|...|.+++|+|+++ ++++++.|+.|++||+ .
T Consensus         9 ~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~   88 (342)
T 1yfq_A            9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIG   88 (342)
T ss_dssp             CCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSS
T ss_pred             CCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEecc
Confidence            699999999999999999999999999999998765  12233447999999999999999 9999999999999999 7


Q ss_pred             CCceeEEEEe--cCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCC---------CceEEEecCCCCCCeEEEEEcCCCCE
Q psy17610        155 TLNELLRISV--MNMICACIVFTYDGKAILSGWNDGFIRCFTPQS---------GKLKFIIPNAHNRGVTALAITQDGTR  223 (515)
Q Consensus       155 ~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~---------~~~~~~~~~~~~~~v~~~~~~~~~~~  223 (515)
                      +++. ..+..  |...|.+++|+| ++.+++++.|+.|++||+++         ++....+  .|...|.+++|+|++  
T Consensus        89 ~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~--  162 (342)
T 1yfq_A           89 SPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNT--KVKNKIFTMDTNSSR--  162 (342)
T ss_dssp             SSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSS--SSCCCEEEEEECSSE--
T ss_pred             CCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEE--eeCCceEEEEecCCc--
Confidence            7654 66777  999999999999 99999999999999999987         6655555  388999999999887  


Q ss_pred             EEEecCCCcEEEEEccC-CceeeEEeeccccCceEEEEEec-CCCEEEEEeCCCcEEEEEcccc------eEEEEEEcC-
Q psy17610        224 LLSGGGEGQVRIWKLTR-ESQSLQCVLKEHTSSVSVIQIKS-DSKEAMSASTDGTCVLWDLIKS------TRLIIMILP-  294 (515)
Q Consensus       224 l~~~~~d~~i~iw~~~~-~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~------~~~~~~~~~-  294 (515)
                      +++++.|+.|++||++. ...........|...+.+++|+| +++++++++.||.+++|++...      +....+..+ 
T Consensus       163 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~  242 (342)
T 1yfq_A          163 LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHR  242 (342)
T ss_dssp             EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCC
T ss_pred             EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeeccc
Confidence            99999999999999976 44444555667888999999999 9999999999999999999876      555555443 


Q ss_pred             ---------ccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCe-EEEE
Q psy17610        295 ---------SMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQI-VKMW  364 (515)
Q Consensus       295 ---------~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~-i~i~  364 (515)
                               ..+.+++|+|++++|++++.+|.|++||+.+++.+..+..++...|.+++  |++++|++++.||. .+.+
T Consensus       243 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~~~~~~  320 (342)
T 1yfq_A          243 LNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDTFKTNA  320 (342)
T ss_dssp             CCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTHHHHCS
T ss_pred             ccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCCcccccc
Confidence                     28999999999999999999999999999999999998887458999999  99999999999997 4444


Q ss_pred             E
Q psy17610        365 M  365 (515)
Q Consensus       365 d  365 (515)
                      .
T Consensus       321 ~  321 (342)
T 1yfq_A          321 A  321 (342)
T ss_dssp             S
T ss_pred             c
Confidence            3

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=100.00  E-value=7.4e-37  Score=289.43  Aligned_cols=276  Identities=23%  Similarity=0.425  Sum_probs=243.7

Q ss_pred             ccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCce
Q psy17610        121 TCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKL  200 (515)
Q Consensus       121 ~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~  200 (515)
                      .+|...|.++.|  +++++++++.|+.|++||+.+++.+..+.+|...|.+++|  ++++|++|+.||.|++||+.+++.
T Consensus       130 ~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~  205 (435)
T 1p22_A          130 SETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEM  205 (435)
T ss_dssp             CSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCE
T ss_pred             cCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcE
Confidence            357778999888  6789999999999999999999999999999999999998  788999999999999999999999


Q ss_pred             EEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCce-eeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEE
Q psy17610        201 KFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQ-SLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVL  279 (515)
Q Consensus       201 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i  279 (515)
                      ...+ ..|...|.+++|++  ..+++|+.||.|++||+..... .....+.+|...|.++++  +++++++++.||.|++
T Consensus       206 ~~~~-~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~v  280 (435)
T 1p22_A          206 LNTL-IHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKV  280 (435)
T ss_dssp             EEEE-CCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEE
T ss_pred             EEEE-cCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEE
Confidence            8888 68999999999974  5899999999999999975433 233567889999999998  7789999999999999


Q ss_pred             EEcccceEEEEEEcC-ccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCC
Q psy17610        280 WDLIKSTRLIIMILP-SMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGAD  358 (515)
Q Consensus       280 wd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d  358 (515)
                      ||+++++.+..+..+ ..+.++.+  ++.++++++.|+.|++||+++++.+..+..+. ..+.+++|  ++++|++|+.|
T Consensus       281 wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~-~~v~~~~~--~~~~l~sg~~d  355 (435)
T 1p22_A          281 WNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHE-ELVRCIRF--DNKRIVSGAYD  355 (435)
T ss_dssp             EETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCS-SCEEEEEC--CSSEEEEEETT
T ss_pred             EECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCc-CcEEEEEe--cCCEEEEEeCC
Confidence            999999988888744 57888888  47899999999999999999999999998876 88999999  68899999999


Q ss_pred             CeEEEEEccCCe---------eeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCc
Q psy17610        359 QIVKMWMYREGV---------PCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELE  412 (515)
Q Consensus       359 g~i~i~d~~~~~---------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  412 (515)
                      |.|++||+.++.         .+..+.+|...|.+++|  ++++|++++.||.|++||+....
T Consensus       356 g~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~  416 (435)
T 1p22_A          356 GKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDP  416 (435)
T ss_dssp             SCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC-----
T ss_pred             CcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCC
Confidence            999999998765         78888999999999999  77889999999999999997654

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=100.00  E-value=5.1e-37  Score=284.54  Aligned_cols=309  Identities=16%  Similarity=0.216  Sum_probs=245.5

Q ss_pred             EecCCCceEEEecCCCCCCeEEEEEcCC---CCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEE
Q psy17610        193 FTPQSGKLKFIIPNAHNRGVTALAITQD---GTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAM  269 (515)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  269 (515)
                      ++....+....+ .+|...|++++|+|+   |++|++|+.||.|++||+..........+.+|...|.+++|+|++++|+
T Consensus        24 ~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~  102 (368)
T 3mmy_A           24 DNHNPMKDIEVT-SSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVF  102 (368)
T ss_dssp             CSSCTTCCEECS-SCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEE
T ss_pred             CCCCCcceeEec-cCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEE
Confidence            344555555555 799999999999998   6999999999999999997545555577889999999999999999999


Q ss_pred             EEeCCCcEEEEEcccceEEEEEEcCccEEEEEE--cCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcC
Q psy17610        270 SASTDGTCVLWDLIKSTRLIIMILPSMIMSAAY--HPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVD  347 (515)
Q Consensus       270 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~  347 (515)
                      +++.||.|++||+.+++......+...+.+++|  +|++.++++++.|+.|++||+++++.+..+..+  ..+.++.+.+
T Consensus       103 s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~--~~~~~~~~~~  180 (368)
T 3mmy_A          103 TASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLP--ERCYCADVIY  180 (368)
T ss_dssp             EEETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECS--SCEEEEEEET
T ss_pred             EEcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecC--CCceEEEecC
Confidence            999999999999999999988888899999999  899999999999999999999999999998876  4566666654


Q ss_pred             CCCEEEEEcCCCeEEEEEccCCeeeeec--cCCCCCeeEEEECCCCcE----EEEEeCCCcEEEEeCCCCcCccCCCccc
Q psy17610        348 DGKYFLTGGADQIVKMWMYREGVPCFVG--IGHAASITKIKISPDKKV----IVSVSADGGIFLWTFPELEDDVGDSRSL  421 (515)
Q Consensus       348 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~--~~~~~~i~~~~~~~~~~~----l~~~~~dg~i~iw~~~~~~~~~~~~~~~  421 (515)
                        ..+++++.++.+.+|+++........  ..+...+..+++.++...    +++++.||.|++|++.......     .
T Consensus       181 --~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~-----~  253 (368)
T 3mmy_A          181 --PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAK-----D  253 (368)
T ss_dssp             --TEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHH-----H
T ss_pred             --CeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccc-----c
Confidence              47888888999999999876433222  234455566666554443    9999999999999997653100     0


Q ss_pred             ceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEE
Q psy17610        422 SSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLT  501 (515)
Q Consensus       422 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s  501 (515)
                      ..................+...|.+++|+|++++|++++.||.|++||+.+++++..+.+|. .+|.+++|+|+|++|++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~v~~~~~s~~g~~l~~  332 (368)
T 3mmy_A          254 NFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLD-QPISACCFNHNGNIFAY  332 (368)
T ss_dssp             SEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCS-SCEEEEEECTTSSCEEE
T ss_pred             ceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCC-CCceEEEECCCCCeEEE
Confidence            00000000001111112233469999999999999999999999999999999999999887 89999999999999999


Q ss_pred             eecCCeEEEEE
Q psy17610        502 GGADQIVKICL  512 (515)
Q Consensus       502 ~~~dg~v~iw~  512 (515)
                      ++.|+..+.|+
T Consensus       333 ~s~d~~~~~~~  343 (368)
T 3mmy_A          333 ASSYDWSKGHE  343 (368)
T ss_dssp             EECCCSTTCGG
T ss_pred             Eeccccccccc
Confidence            99988655443

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=100.00  E-value=2.7e-37  Score=286.38  Aligned_cols=285  Identities=13%  Similarity=0.243  Sum_probs=241.2

Q ss_pred             EEecCCCcEEEEEEecC---CCEEEEEecCceEEEEECCC-CceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEE
Q psy17610         76 YLLKDDSGISSLQYNPV---NNKVFVGTVNCEIFLIDMNS-GFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIW  151 (515)
Q Consensus        76 ~~~~~~~~v~~~~~s~~---~~~l~~~~~d~~i~iw~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw  151 (515)
                      .+.+|.+.|++++|+|+   |++|++|+.||.|++||+++ +..+...+.+|...|.+++|+|++++|++++.|+.|++|
T Consensus        34 ~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iw  113 (368)
T 3mmy_A           34 VTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMW  113 (368)
T ss_dssp             CSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred             eccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEE
Confidence            34579999999999998   69999999999999999997 556657788899999999999999999999999999999


Q ss_pred             eCCCCceeEEEEecCeEEEEEEE--eeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecC
Q psy17610        152 SVRTLNELLRISVMNMICACIVF--TYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGG  229 (515)
Q Consensus       152 ~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  229 (515)
                      |+++++.+. +..|...|.+++|  +|++++|++++.||.|++||+++++....+. .+ ..+.++.+.+  ..+++++.
T Consensus       114 d~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-~~-~~~~~~~~~~--~~~~~~~~  188 (368)
T 3mmy_A          114 DLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQ-LP-ERCYCADVIY--PMAVVATA  188 (368)
T ss_dssp             ETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEE-CS-SCEEEEEEET--TEEEEEEG
T ss_pred             EcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEe-cC-CCceEEEecC--CeeEEEeC
Confidence            999887665 6679999999999  8899999999999999999999998887773 33 4666777664  47888899


Q ss_pred             CCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCE----EEEEeCCCcEEEEEcccc---eEEEEEEcCc-------
Q psy17610        230 EGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKE----AMSASTDGTCVLWDLIKS---TRLIIMILPS-------  295 (515)
Q Consensus       230 d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~----l~~~~~d~~i~iwd~~~~---~~~~~~~~~~-------  295 (515)
                      ++.+.+|+++............+...+.++.+.++...    +++++.||.|++||++..   .....+..+.       
T Consensus       189 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (368)
T 3mmy_A          189 ERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTS  268 (368)
T ss_dssp             GGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----C
T ss_pred             CCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeeccccccc
Confidence            99999999976555544444455566777777776655    999999999999999876   3344444433       


Q ss_pred             ------cEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEc
Q psy17610        296 ------MIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMY  366 (515)
Q Consensus       296 ------~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~  366 (515)
                            .+.+++|+|++++|++++.||.|++||+.+++.+..+..+. ..+.+++|+|+|++|++++.|+..+.|++
T Consensus       269 ~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~v~~~~~s~~g~~l~~~s~d~~~~~~~~  344 (368)
T 3mmy_A          269 APQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLD-QPISACCFNHNGNIFAYASSYDWSKGHEF  344 (368)
T ss_dssp             CCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCS-SCEEEEEECTTSSCEEEEECCCSTTCGGG
T ss_pred             ccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCC-CCceEEEECCCCCeEEEEecccccccccc
Confidence                  59999999999999999999999999999999999988766 89999999999999999999875554443

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=100.00  E-value=5.1e-36  Score=313.20  Aligned_cols=400  Identities=10%  Similarity=0.031  Sum_probs=301.6

Q ss_pred             EEEEecCCCcEEEEEEecCCCEEEEEecC------ceEEEEECCCCceeEEeeccCccCe-------EEEEeCCCCcEEE
Q psy17610         74 ALYLLKDDSGISSLQYNPVNNKVFVGTVN------CEIFLIDMNSGFTLTLVNTCHTSAI-------YDLQFPVNFSSVF  140 (515)
Q Consensus        74 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~d------~~i~iw~~~~~~~~~~~~~~h~~~v-------~~~~~~~~~~~l~  140 (515)
                      ...+.+|...+.+++|||||++||+++.+      ..|++|++.++.  ...+..|...+       ..++|+|||+.++
T Consensus        45 ~~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~--~~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~  122 (1045)
T 1k32_A           45 TRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGE--IKRITYFSGKSTGRRMFTDVAGFDPDGNLII  122 (1045)
T ss_dssp             EEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTE--EEECCCCCEEEETTEECSEEEEECTTCCEEE
T ss_pred             EEEeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCC--eEEcccCCCcccccccccccccCCCCCEEEE
Confidence            34566799999999999999999988653      479999999864  34456688888       9999999998555


Q ss_pred             EEecC------CcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeC------------CCeEEEEecCCCceEE
Q psy17610        141 ATCSK------NDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWN------------DGFIRCFTPQSGKLKF  202 (515)
Q Consensus       141 ~~~~d------~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------------dg~i~~~~~~~~~~~~  202 (515)
                      +++.+      ..|.+|++.+++. ..+..+.  ...++|+| | ++++++.            +....+|....+....
T Consensus       123 ~~~~~~~~~~~~~l~~~~~~~g~~-~~l~~~~--~~~~~~sp-G-~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~  197 (1045)
T 1k32_A          123 STDAMQPFSSMTCLYRVENDGINF-VPLNLGP--ATHILFAD-G-RRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFK  197 (1045)
T ss_dssp             EECTTSSSTTCCEEEEEEGGGTEE-EECCSCS--CSEEEEET-T-EEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEE
T ss_pred             EECCcCCCcccceEEEEECCCCCe-EEecCCC--cceeeeCC-C-EEEEeccCCCccccccccCCCcCCEEEECCCCCeE
Confidence            55533      3577888876654 3333222  24567999 8 8887753            2345566433333444


Q ss_pred             EecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEc
Q psy17610        203 IIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDL  282 (515)
Q Consensus       203 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~  282 (515)
                      .+ ..|...+.++.|+++ ..+++++.++.+.+|.++..... ...+..|. .+...+|+|+|+.++++. ++.|.+||+
T Consensus       198 ~l-~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~-~~~l~~~~-~~~~~~~SpDG~~la~~~-~~~i~~~d~  272 (1045)
T 1k32_A          198 KI-VDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKD-LRKHTSFT-DYYPRHLNTDGRRILFSK-GGSIYIFNP  272 (1045)
T ss_dssp             EE-ECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCS-CEECCCCC-SSCEEEEEESSSCEEEEE-TTEEEEECT
T ss_pred             EC-cCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCc-ceEecCCC-CcceeeEcCCCCEEEEEe-CCEEEEecC
Confidence            45 689999999999988 66677888899999987533322 23344444 456779999999988874 889999998


Q ss_pred             ccceEEEEEEcC------------ccEEEEEEc-CCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCC
Q psy17610        283 IKSTRLIIMILP------------SMIMSAAYH-PSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDG  349 (515)
Q Consensus       283 ~~~~~~~~~~~~------------~~~~~~~~~-~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~  349 (515)
                      ...+. ..+..+            ..+..++|+ |+++.+++++ ++.+.+|+...++... +..+....+..++|+ ||
T Consensus       273 ~~~~l-~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~s-dg  348 (1045)
T 1k32_A          273 DTEKI-EKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK-VPEPLRIRYVRRGGD-TK  348 (1045)
T ss_dssp             TTCCE-EECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE-CSCCSCEEEEEECSS-SE
T ss_pred             CceEe-eeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEE-ccCCCcceEEeeeEc-CC
Confidence            54433 333321            258899999 9999998887 7899999998876543 444442288999999 99


Q ss_pred             CEEEEEcCCCeEE-EEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecc
Q psy17610        350 KYFLTGGADQIVK-MWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRS  428 (515)
Q Consensus       350 ~~l~~~~~dg~i~-i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~  428 (515)
                      +.|+.++.++.+. +|++.+++.... .+|...+..++|+||+++|++++.++.+++||+.+.+.               
T Consensus       349 ~~l~~~s~~~~l~~~~d~~~~~~~~l-~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~---------------  412 (1045)
T 1k32_A          349 VAFIHGTREGDFLGIYDYRTGKAEKF-EENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKP---------------  412 (1045)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEC-CCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCE---------------
T ss_pred             CeEEEEECCCceEEEEECCCCCceEe-cCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCce---------------
Confidence            9999998888888 999987765443 47888999999999999999999999999999976431               


Q ss_pred             cccccceeeecCcccEEEeeeccCCcEEEEeecCC----------eEEEEecCCCeeeeeecccccceEEEEEEcCCCcE
Q psy17610        429 TARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNK----------MIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKY  498 (515)
Q Consensus       429 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg----------~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  498 (515)
                           ......+...+..++|||||++|++++.++          .|++||+.+++ +..+..+. ..+..++|+|||++
T Consensus       413 -----~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~-~~~~~~~~spdG~~  485 (1045)
T 1k32_A          413 -----TVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTEN-SHDYAPAFDADSKN  485 (1045)
T ss_dssp             -----EEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSS-SBEEEEEECTTSCE
T ss_pred             -----EEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCC-cccCCceEcCCCCE
Confidence                 111223556688999999999999887654          89999999887 56666665 77889999999999


Q ss_pred             EEEeecCCeEEEEE
Q psy17610        499 FLTGGADQIVKICL  512 (515)
Q Consensus       499 l~s~~~dg~v~iw~  512 (515)
                      |++++.++..++|+
T Consensus       486 l~~~s~~~~~~~~~  499 (1045)
T 1k32_A          486 LYYLSYRSLDPSPD  499 (1045)
T ss_dssp             EEEEESCCCCCEEC
T ss_pred             EEEEecccCCcCcc
Confidence            99999888877775

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5e-37  Score=285.82  Aligned_cols=255  Identities=15%  Similarity=0.273  Sum_probs=219.9

Q ss_pred             EEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCC-ceeEEeeccCccCeEEEEeCCC--CcEEEEEecCCcEEEEe
Q psy17610         76 YLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSG-FTLTLVNTCHTSAIYDLQFPVN--FSSVFATCSKNDIRIWS  152 (515)
Q Consensus        76 ~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~-~~~~~~~~~h~~~v~~~~~~~~--~~~l~~~~~d~~i~iw~  152 (515)
                      .+.+|.+.|++++|+|++++||+|+.||.|++||+..+ ......+.+|..+|.+++|+|+  +.+|++++.|+.|++||
T Consensus         6 ~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd   85 (379)
T 3jrp_A            6 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK   85 (379)
T ss_dssp             CEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEE
T ss_pred             EecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEE
Confidence            45689999999999999999999999999999999742 3445567789999999999987  89999999999999999


Q ss_pred             CCCCc--eeEEEEecCeEEEEEEEeeC--CCEEEEEeCCCeEEEEecCCCce--EEEecCCCCCCeEEEEEcC-------
Q psy17610        153 VRTLN--ELLRISVMNMICACIVFTYD--GKAILSGWNDGFIRCFTPQSGKL--KFIIPNAHNRGVTALAITQ-------  219 (515)
Q Consensus       153 ~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~-------  219 (515)
                      +.+++  .+..+..|...|.+++|+|+  +++|++++.|+.|++||+.++..  ...+ ..|...|.+++|+|       
T Consensus        86 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~  164 (379)
T 3jrp_A           86 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIII-DAHAIGVNSASWAPATIEEDG  164 (379)
T ss_dssp             EETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEE-ECCTTCEEEEEECCCC-----
T ss_pred             cCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEe-cCCCCceEEEEEcCccccccc
Confidence            99987  67777789999999999999  99999999999999999988732  3333 58999999999999       


Q ss_pred             ------CCCEEEEecCCCcEEEEEccCCc--eeeEEeeccccCceEEEEEecC---CCEEEEEeCCCcEEEEEcccce--
Q psy17610        220 ------DGTRLLSGGGEGQVRIWKLTRES--QSLQCVLKEHTSSVSVIQIKSD---SKEAMSASTDGTCVLWDLIKST--  286 (515)
Q Consensus       220 ------~~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~iwd~~~~~--  286 (515)
                            ++.++++++.|+.|++||++...  ......+.+|...|.+++|+|+   ++++++++.||.|++||++++.  
T Consensus       165 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~  244 (379)
T 3jrp_A          165 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGP  244 (379)
T ss_dssp             -----CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSC
T ss_pred             cccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCcc
Confidence                  69999999999999999996543  3455678889999999999999   8999999999999999998863  


Q ss_pred             -EEEEEE---cCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEE
Q psy17610        287 -RLIIMI---LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRS  331 (515)
Q Consensus       287 -~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~  331 (515)
                       ......   +...+.+++|+|+++++++++.||.|++|++........
T Consensus       245 ~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~  293 (379)
T 3jrp_A          245 WKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEP  293 (379)
T ss_dssp             CEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETTEEEE
T ss_pred             ceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCCcccc
Confidence             222221   456799999999999999999999999999986544433

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=100.00  E-value=4.9e-37  Score=290.66  Aligned_cols=292  Identities=17%  Similarity=0.281  Sum_probs=237.8

Q ss_pred             ecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCc
Q psy17610         78 LKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLN  157 (515)
Q Consensus        78 ~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~  157 (515)
                      .+|...|.|+++  ++++|++|+.||.|++||..+++ ....+.+|.+.|.+++|  +++.+++++.||.|++||+.+++
T Consensus       130 ~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~-~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~  204 (435)
T 1p22_A          130 SETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLE-CKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGE  204 (435)
T ss_dssp             CSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCC-EEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCC
T ss_pred             cCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCe-EEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCc
Confidence            356778999887  79999999999999999999864 45567789999999999  67799999999999999999999


Q ss_pred             eeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEE--EecCCCCCCeEEEEEcCCCCEEEEecCCCcEEE
Q psy17610        158 ELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKF--IIPNAHNRGVTALAITQDGTRLLSGGGEGQVRI  235 (515)
Q Consensus       158 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i  235 (515)
                      .+..+..|...|.+++|+  +..+++++.||.|++||+.+++...  ....+|...|.+++|  +++++++|+.||.|++
T Consensus       205 ~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~v  280 (435)
T 1p22_A          205 MLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKV  280 (435)
T ss_dssp             EEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEE
T ss_pred             EEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEE
Confidence            999999999999999996  4589999999999999999876542  333789999999999  6789999999999999


Q ss_pred             EEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEc-CccEEEEEEcCCCcEEEEEEC
Q psy17610        236 WKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMIL-PSMIMSAAYHPSEVQLITCST  314 (515)
Q Consensus       236 w~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~  314 (515)
                      ||++  .......+.+|...|.++.+  +++++++++.||.|++||+++++.+..+.. ...+.++++  ++.++++++.
T Consensus       281 wd~~--~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~  354 (435)
T 1p22_A          281 WNTS--TCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAY  354 (435)
T ss_dssp             EETT--TCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEET
T ss_pred             EECC--cCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeC
Confidence            9995  45667778899999999988  468999999999999999999998888764 457888888  7889999999


Q ss_pred             CCeEEEEeCCCCc---------eEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEE
Q psy17610        315 NKMIDYWETCDGS---------IIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKI  385 (515)
Q Consensus       315 ~~~i~~~d~~~~~---------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~  385 (515)
                      ||.|++||+.+++         .+..+..+. ..|.+++|  ++++|++++.||.|++||+.+....... ....+..++
T Consensus       355 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~~~-~~~~~~~~~  430 (435)
T 1p22_A          355 DGKIKVWDLVAALDPRAPAGTLCLRTLVEHS-GRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQAE-PPRSPSRTY  430 (435)
T ss_dssp             TSCEEEEEHHHHTSTTSCTTTTEEEEECCCS-SCCCCEEE--CSSCEEECCSSSEEEEEC--------------------
T ss_pred             CCcEEEEECCCCCCccccccchheeeccCCC-CCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCcccC-CCCCCccce
Confidence            9999999987766         777787766 88999999  6788999999999999999876554433 223344555


Q ss_pred             EEC
Q psy17610        386 KIS  388 (515)
Q Consensus       386 ~~~  388 (515)
                      .|.
T Consensus       431 ~~~  433 (435)
T 1p22_A          431 TYI  433 (435)
T ss_dssp             ---
T ss_pred             eee
Confidence            543

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=100.00  E-value=1.4e-35  Score=281.22  Aligned_cols=369  Identities=9%  Similarity=0.065  Sum_probs=283.3

Q ss_pred             cCCCcEEEEEEecCCCEEEEEecC-ceEEEEECCCCceeEEeeccCccCeEEEE---eCCCCcEEEEEec----------
Q psy17610         79 KDDSGISSLQYNPVNNKVFVGTVN-CEIFLIDMNSGFTLTLVNTCHTSAIYDLQ---FPVNFSSVFATCS----------  144 (515)
Q Consensus        79 ~~~~~v~~~~~s~~~~~l~~~~~d-~~i~iw~~~~~~~~~~~~~~h~~~v~~~~---~~~~~~~l~~~~~----------  144 (515)
                      .....|..+.++|....++..... ....++.           ......+..++   |+|++..++..+.          
T Consensus        25 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-----------~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~   93 (433)
T 3bws_A           25 KNGTEIVKFSIHPYKGTVIRLGEEILPFKVLE-----------MDKNIALVEMAIPVYKDEKEIELKLSSPGFQNSSYRI   93 (433)
T ss_dssp             --CEEEEEEEEECCTTCEEEETTEECCEEEEE-----------EETTEEEEEEEEECCCTTCCEEEEEECTTBCCEEEEE
T ss_pred             cCCcEEEEEecccccCceEEcCceecceeeee-----------cccCCccEEEEEeeccCCCcEEEEEEccccCcceeee
Confidence            455678888899865444433211 1112221           11233456666   7776655554332          


Q ss_pred             ----CCcEEEEe--CCCC--ceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEec----CCCCCCe
Q psy17610        145 ----KNDIRIWS--VRTL--NELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIP----NAHNRGV  212 (515)
Q Consensus       145 ----d~~i~iw~--~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~----~~~~~~v  212 (515)
                          ++.+.+|.  ..++  +.+..+..+. .+.+++|+|++.++++++.++.|++||+.+++......    .+|...|
T Consensus        94 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v  172 (433)
T 3bws_A           94 RKPEELNEKLIALDKEGITHRFISRFKTGF-QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFV  172 (433)
T ss_dssp             SSGGGGTTCEEECCBTTCSEEEEEEEECSS-CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEE
T ss_pred             cccCCCceEEEEECCCCCcceEEEEEcCCC-CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCce
Confidence                33234454  4334  4455555443 45689999977777788888999999999998876432    3688899


Q ss_pred             EEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEe-CCCcEEEEEcccceEEEEE
Q psy17610        213 TALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAS-TDGTCVLWDLIKSTRLIIM  291 (515)
Q Consensus       213 ~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~  291 (515)
                      .+++|+++++++++++.|+.|++||++  .......+..|...+.+++|+|+++.+++++ .|+.|++||+++++....+
T Consensus       173 ~~~~~~~~~~~~~s~~~d~~v~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~  250 (433)
T 3bws_A          173 ETISIPEHNELWVSQMQANAVHVFDLK--TLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKT  250 (433)
T ss_dssp             EEEEEGGGTEEEEEEGGGTEEEEEETT--TCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEC
T ss_pred             eEEEEcCCCEEEEEECCCCEEEEEECC--CceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEe
Confidence            999999999999999999999999995  4455566778889999999999999886555 7899999999999988888


Q ss_pred             EcCccEEEEEEcCCCcEEEEEE--------CCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEE-EEEcCCCeEE
Q psy17610        292 ILPSMIMSAAYHPSEVQLITCS--------TNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYF-LTGGADQIVK  362 (515)
Q Consensus       292 ~~~~~~~~~~~~~~~~~l~~~~--------~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~  362 (515)
                      .....+..++++|+++.+++++        .++.|++||+.+++.+..+...  ..+.+++|+|+++.+ ++++.++.|+
T Consensus       251 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~--~~~~~~~~~~~g~~l~~~~~~~~~v~  328 (433)
T 3bws_A          251 DKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPP--GNKRHIVSGNTENKIYVSDMCCSKIE  328 (433)
T ss_dssp             CCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEE--ECEEEEEECSSTTEEEEEETTTTEEE
T ss_pred             cCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCC--CCcceEEECCCCCEEEEEecCCCEEE
Confidence            8888899999999999999888        5889999999999887776433  578899999999754 6668999999


Q ss_pred             EEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcc
Q psy17610        363 MWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPS  442 (515)
Q Consensus       363 i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  442 (515)
                      +||+.+++....+. +...+.+++|+|++++|++++.+..-                                       
T Consensus       329 v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~---------------------------------------  368 (433)
T 3bws_A          329 VYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNH---------------------------------------  368 (433)
T ss_dssp             EEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCC---------------------------------------
T ss_pred             EEECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCc---------------------------------------
Confidence            99999988877764 67789999999999988888764310                                       


Q ss_pred             cEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeec-CCeEEEEEE
Q psy17610        443 MIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA-DQIVKICLY  513 (515)
Q Consensus       443 ~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~-dg~v~iw~~  513 (515)
                              ....++++++.||.|++||+.+++.+..+..+  ..+.+++|+|+|++|++++. |+.|++|++
T Consensus       369 --------~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~  430 (433)
T 3bws_A          369 --------PTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAG--NQPTGLDVSPDNRYLVISDFLDHQIRVYRR  430 (433)
T ss_dssp             --------TTTCTTSCCSSCCEEEEEETTTTEEEEEEECS--SSEEEEEECTTSCEEEEEETTTTEEEEEEE
T ss_pred             --------cccccccccccceEEEEEECCCCcEEEEecCC--CCCceEEEcCCCCEEEEEECCCCeEEEEEe
Confidence                    02235667888999999999999999888874  67999999999999998875 999999996

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=100.00  E-value=7.8e-38  Score=282.38  Aligned_cols=250  Identities=18%  Similarity=0.231  Sum_probs=204.2

Q ss_pred             eEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCc--eeEEEEecCeEEEEEEEee--CCCEEEEEeCCCeEE
Q psy17610        116 LTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLN--ELLRISVMNMICACIVFTY--DGKAILSGWNDGFIR  191 (515)
Q Consensus       116 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~  191 (515)
                      +..++.+|.++|.+++|+|+|++|++++.|++|+|||+.+++  .+..+.+|..+|.+++|+|  ++++|++++.|+.|+
T Consensus         5 ~~~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~   84 (316)
T 3bg1_A            5 INTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVI   84 (316)
T ss_dssp             ---------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEE
T ss_pred             eeeecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEE
Confidence            344667899999999999999999999999999999998765  4677889999999999986  488999999999999


Q ss_pred             EEecCCCc--eEEEecCCCCCCeEEEEEcCC--CCEEEEecCCCcEEEEEccCCc-eeeEEeeccccCceEEEEEecC--
Q psy17610        192 CFTPQSGK--LKFIIPNAHNRGVTALAITQD--GTRLLSGGGEGQVRIWKLTRES-QSLQCVLKEHTSSVSVIQIKSD--  264 (515)
Q Consensus       192 ~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iw~~~~~~-~~~~~~~~~~~~~v~~~~~~~~--  264 (515)
                      +||+++++  ....+ .+|...|.+++|+|+  +.+|++|+.|+.|++||++... ......+.+|...+.+++|+|+  
T Consensus        85 iWd~~~~~~~~~~~~-~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~  163 (316)
T 3bg1_A           85 IWREENGTWEKSHEH-AGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVV  163 (316)
T ss_dssp             EECCSSSCCCEEEEE-CCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCC
T ss_pred             EEECCCCcceEEEEc-cCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccC
Confidence            99999874  44455 689999999999997  7899999999999999996542 2234556789999999999997  


Q ss_pred             ---------------CCEEEEEeCCCcEEEEEcccc---eEEEEEE-cCccEEEEEEcCCC----cEEEEEECCCeEEEE
Q psy17610        265 ---------------SKEAMSASTDGTCVLWDLIKS---TRLIIMI-LPSMIMSAAYHPSE----VQLITCSTNKMIDYW  321 (515)
Q Consensus       265 ---------------~~~l~~~~~d~~i~iwd~~~~---~~~~~~~-~~~~~~~~~~~~~~----~~l~~~~~~~~i~~~  321 (515)
                                     +++|++++.|++|++||++..   +....+. +...+.+++|+|++    .+|++++.|+.|++|
T Consensus       164 ~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw  243 (316)
T 3bg1_A          164 PGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIW  243 (316)
T ss_dssp             C------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEE
T ss_pred             CccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEE
Confidence                           468999999999999999754   3344443 44579999999986    889999999999999


Q ss_pred             eCCCCc----eEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEcc
Q psy17610        322 ETCDGS----IIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYR  367 (515)
Q Consensus       322 d~~~~~----~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~  367 (515)
                      ++.+..    ....+..+ ...+.+++|+|++++|++++.|+.|++|+..
T Consensus       244 ~~~~~~~~~~~~~~~~~~-~~~v~~v~~sp~g~~las~~~D~~v~lw~~~  292 (316)
T 3bg1_A          244 TCDDASSNTWSPKLLHKF-NDVVWHVSWSITANILAVSGGDNKVTLWKES  292 (316)
T ss_dssp             ECSSTTCCCCBCCEEEEC-SSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred             EccCccccchhhhhhhcC-CCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence            987631    12233334 3789999999999999999999999999975

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.2e-37  Score=287.14  Aligned_cols=253  Identities=20%  Similarity=0.257  Sum_probs=217.2

Q ss_pred             CceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecC--CCceEEEecCCCCCCeEEEEEcCC--CCEEEEecCCC
Q psy17610        156 LNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQ--SGKLKFIIPNAHNRGVTALAITQD--GTRLLSGGGEG  231 (515)
Q Consensus       156 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~  231 (515)
                      |+++..+.+|...|.+++|+|++++|++++.||.|++||+.  +++....+ .+|...|.+++|+++  +++|++++.||
T Consensus         1 G~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~~l~s~~~dg   79 (379)
T 3jrp_A            1 GSMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTL-TGHEGPVWRVDWAHPKFGTILASCSYDG   79 (379)
T ss_dssp             ----CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEE-CCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred             CCccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEe-cCCCCcEEEEEeCCCCCCCEEEEeccCC
Confidence            34567788999999999999999999999999999999998  45556666 689999999999987  89999999999


Q ss_pred             cEEEEEccCCceeeEEeeccccCceEEEEEecC--CCEEEEEeCCCcEEEEEcccce---EEEEEEcCccEEEEEEcC--
Q psy17610        232 QVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSD--SKEAMSASTDGTCVLWDLIKST---RLIIMILPSMIMSAAYHP--  304 (515)
Q Consensus       232 ~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~--  304 (515)
                      .|++||+..........+..|...|.+++|+|+  +.++++++.|+.|++||+++..   ......+...+.+++|+|  
T Consensus        80 ~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~  159 (379)
T 3jrp_A           80 KVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPAT  159 (379)
T ss_dssp             CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC
T ss_pred             EEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcc
Confidence            999999976655577788889999999999999  9999999999999999998773   233334566899999999  


Q ss_pred             -----------CCcEEEEEECCCeEEEEeCCCCce----EEEEecCCCccEEEEEEcCC---CCEEEEEcCCCeEEEEEc
Q psy17610        305 -----------SEVQLITCSTNKMIDYWETCDGSI----IRSLEGSDVAAVNCVDFVDD---GKYFLTGGADQIVKMWMY  366 (515)
Q Consensus       305 -----------~~~~l~~~~~~~~i~~~d~~~~~~----~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~dg~i~i~d~  366 (515)
                                 ++..+++++.|+.|++||++++..    ...+..+. ..+.+++|+|+   +++|++++.||.|++||+
T Consensus       160 ~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~-~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~  238 (379)
T 3jrp_A          160 IEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS-DWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQ  238 (379)
T ss_dssp             ----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCS-SCEEEEEECCCCSSSEEEEEEETTSCEEEEEE
T ss_pred             ccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEeccc-CcEeEEEECCCCCCCCeEEEEeCCCEEEEEeC
Confidence                       699999999999999999987653    34455554 89999999999   899999999999999999


Q ss_pred             cCCe-----eeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCC
Q psy17610        367 REGV-----PCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPE  410 (515)
Q Consensus       367 ~~~~-----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~  410 (515)
                      +++.     .......|...|++++|+|++++|++++.||.|++|++..
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~  287 (379)
T 3jrp_A          239 DNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL  287 (379)
T ss_dssp             SSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred             CCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence            8863     2333345889999999999999999999999999999874

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=100.00  E-value=1.1e-36  Score=280.24  Aligned_cols=294  Identities=13%  Similarity=0.107  Sum_probs=223.4

Q ss_pred             EEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCC----ceeEEEEecCeEEEEEEEee--CCCEEEEEeCCCeE
Q psy17610        117 TLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTL----NELLRISVMNMICACIVFTY--DGKAILSGWNDGFI  190 (515)
Q Consensus       117 ~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~----~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i  190 (515)
                      ..++.+|.+.|++++|+|++++|++++.|+.|++||+.++    +....+.+|...|.+++|+|  ++++|++++.||.|
T Consensus         4 ~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v   83 (351)
T 3f3f_A            4 QPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTV   83 (351)
T ss_dssp             CCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred             cccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeE
Confidence            4466789999999999999999999999999999999976    35667788999999999999  69999999999999


Q ss_pred             EEEecCCC---------ceEEEecCCCCCCeEEEEEcCC--CCEEEEecCCCcEEEEEccCCceeeEE-----------e
Q psy17610        191 RCFTPQSG---------KLKFIIPNAHNRGVTALAITQD--GTRLLSGGGEGQVRIWKLTRESQSLQC-----------V  248 (515)
Q Consensus       191 ~~~~~~~~---------~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iw~~~~~~~~~~~-----------~  248 (515)
                      ++||++++         +....+ ..|...|.+++|+|+  +++|++++.||.|++||++........           .
T Consensus        84 ~vwd~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~  162 (351)
T 3f3f_A           84 KLWEEDPDQEECSGRRWNKLCTL-NDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIP  162 (351)
T ss_dssp             EEEEECTTSCTTSSCSEEEEEEE-CCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCC
T ss_pred             EEEecCCCcccccccCcceeeee-cccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccc
Confidence            99999887         445555 689999999999999  999999999999999998654321110           1


Q ss_pred             eccccCceEEEEEecC---CCEEEEEeCCCcEEEEEcccceEE--EEEE-cCccEEEEEEcCCC----cEEEEEECCCeE
Q psy17610        249 LKEHTSSVSVIQIKSD---SKEAMSASTDGTCVLWDLIKSTRL--IIMI-LPSMIMSAAYHPSE----VQLITCSTNKMI  318 (515)
Q Consensus       249 ~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~--~~~~-~~~~~~~~~~~~~~----~~l~~~~~~~~i  318 (515)
                      ...|...+.+++|+|+   +..+++++.++.+.+|+...++..  ..+. +...+.+++|+|++    +++++++.|+.|
T Consensus       163 ~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i  242 (351)
T 3f3f_A          163 PANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRI  242 (351)
T ss_dssp             CSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCE
T ss_pred             cCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeE
Confidence            1257889999999997   899999999999988888777653  3332 45689999999998    899999999999


Q ss_pred             EEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEE----cCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEE
Q psy17610        319 DYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTG----GADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVI  394 (515)
Q Consensus       319 ~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~----~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l  394 (515)
                      ++||++.+.......... ........++....++.+    .....+.+|+....+.+..+.+|...|++++|+|++++|
T Consensus       243 ~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l  321 (351)
T 3f3f_A          243 RIFKITEKLSPLASEESL-TNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTIL  321 (351)
T ss_dssp             EEEEEEECC----------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCE
T ss_pred             EEEeCCCCcCccccCCcc-cceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEE
Confidence            999998776554433322 233333444444433333    334556677777778888899999999999999999999


Q ss_pred             EEEeCCCcEEEEeCCCCc
Q psy17610        395 VSVSADGGIFLWTFPELE  412 (515)
Q Consensus       395 ~~~~~dg~i~iw~~~~~~  412 (515)
                      ++++.||.|++|++....
T Consensus       322 ~s~~~dg~v~iw~~~~~~  339 (351)
T 3f3f_A          322 SSAGDDGKVRLWKATYSN  339 (351)
T ss_dssp             EEEETTSCEEEEEECTTS
T ss_pred             EEecCCCcEEEEecCcCc
Confidence            999999999999997653

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=100.00  E-value=1.6e-34  Score=269.91  Aligned_cols=308  Identities=13%  Similarity=0.127  Sum_probs=249.4

Q ss_pred             CEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEE-EecCCcEEEEeCCCCceeEEEEecCeEEEEE
Q psy17610         94 NKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFA-TCSKNDIRIWSVRTLNELLRISVMNMICACI  172 (515)
Q Consensus        94 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~-~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~  172 (515)
                      .++++++.|+.|++||+++++.+. .+..| ..+.+++|+|+++++++ ++.|+.|++||+.+++.+..+..+. .+.++
T Consensus         3 ~l~vs~~~d~~v~v~d~~~~~~~~-~~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~   79 (391)
T 1l0q_A            3 FAYIANSESDNISVIDVTSNKVTA-TIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGV   79 (391)
T ss_dssp             EEEEEETTTTEEEEEETTTTEEEE-EEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEE
T ss_pred             EEEEEcCCCCEEEEEECCCCeEEE-EeecC-CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-Cccce
Confidence            457788899999999999965444 44545 45899999999998854 4579999999999999888887665 88999


Q ss_pred             EEeeCCCEEEEEe-CCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEE-EEecCCCcEEEEEccCCceeeEEeec
Q psy17610        173 VFTYDGKAILSGW-NDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRL-LSGGGEGQVRIWKLTRESQSLQCVLK  250 (515)
Q Consensus       173 ~~~~~~~~l~~~~-~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~iw~~~~~~~~~~~~~~  250 (515)
                      +|+|++++|++++ .++.|++||+.+++....+.  +...+.+++|+|+++.+ ++++.++.|++||+..  ......+.
T Consensus        80 ~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~--~~~~~~~~  155 (391)
T 1l0q_A           80 AVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVK--TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVT--KAVINTVS  155 (391)
T ss_dssp             EECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE--CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTT--TEEEEEEE
T ss_pred             EECCCCCEEEEEECCCCEEEEEECCCCeEEEEEe--CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCC--CcEEEEEe
Confidence            9999999886554 67999999999999887763  44578999999999977 6888899999999954  34445555


Q ss_pred             cccCceEEEEEecCCCEE-EEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEE---CCCeEEEEeCCCC
Q psy17610        251 EHTSSVSVIQIKSDSKEA-MSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCS---TNKMIDYWETCDG  326 (515)
Q Consensus       251 ~~~~~v~~~~~~~~~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~i~~~d~~~~  326 (515)
                      .+ ..+..++|+|+++.+ ++++.++.|++||+++++....+.....+.+++|+|+++++++++   .++.|++||+.++
T Consensus       156 ~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~  234 (391)
T 1l0q_A          156 VG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTN  234 (391)
T ss_dssp             CC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTT
T ss_pred             cC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCC
Confidence            44 456899999999987 567788999999999999998888888999999999999999888   6899999999999


Q ss_pred             ceEEEEecCCCccEEEEEEcCCCCEE-EEEcCCCeEEEEEccCCeeeeeccCCCCCee---EEEECCCC-----------
Q psy17610        327 SIIRSLEGSDVAAVNCVDFVDDGKYF-LTGGADQIVKMWMYREGVPCFVGIGHAASIT---KIKISPDK-----------  391 (515)
Q Consensus       327 ~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~---~~~~~~~~-----------  391 (515)
                      +.+..+..+  ..+.+++|+|+++++ ++++.|+.|++||+.+++.+..+..|..+..   .+.+.|++           
T Consensus       235 ~~~~~~~~~--~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~~  312 (391)
T 1l0q_A          235 KITARIPVG--PDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSN  312 (391)
T ss_dssp             EEEEEEECC--SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEECCSSCEEECSSCCCCCBCCEEES
T ss_pred             eEEEEEecC--CCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCcCCCccceeeecccccccccccccccc
Confidence            998888876  457899999999877 5668899999999999988887766654421   12222211           


Q ss_pred             -----------cEEEEEeCCCcEEEEeCCCC
Q psy17610        392 -----------KVIVSVSADGGIFLWTFPEL  411 (515)
Q Consensus       392 -----------~~l~~~~~dg~i~iw~~~~~  411 (515)
                                 ..+...+.|...++|++..+
T Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~g  343 (391)
T 1l0q_A          313 ITSGYIFLSEPVQFTDLSKDATEWKWDFGDG  343 (391)
T ss_dssp             CCSSEEETTCCEEEEECCBSCSEEEEECSSS
T ss_pred             cccccccccceEEEEeCCCCceEEEEECCCC
Confidence                       34555567888999998654

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=100.00  E-value=7.1e-35  Score=276.27  Aligned_cols=323  Identities=10%  Similarity=0.042  Sum_probs=258.6

Q ss_pred             CCCcEEEEE---EecCCCEEEEEe--------------cCc--eEEEEECCCCc-eeEEeeccCccCeEEEEeCCCCcEE
Q psy17610         80 DDSGISSLQ---YNPVNNKVFVGT--------------VNC--EIFLIDMNSGF-TLTLVNTCHTSAIYDLQFPVNFSSV  139 (515)
Q Consensus        80 ~~~~v~~~~---~s~~~~~l~~~~--------------~d~--~i~iw~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l  139 (515)
                      ....+..++   |+|+++.+++.+              .++  .|..+|.+++. .....+. ....+.+++|+|++..+
T Consensus        59 ~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~-~~~~~~~~~~s~~~~~~  137 (433)
T 3bws_A           59 KNIALVEMAIPVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITHRFISRFK-TGFQPKSVRFIDNTRLA  137 (433)
T ss_dssp             TTEEEEEEEEECCCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTCSEEEEEEEE-CSSCBCCCEESSSSEEE
T ss_pred             cCCccEEEEEeeccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCCCCcceEEEEEc-CCCCceEEEEeCCCeEE
Confidence            455667777   777776665432              233  44555554331 2333333 33456699999976666


Q ss_pred             EEEecCCcEEEEeCCCCceeEE-----EEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEE
Q psy17610        140 FATCSKNDIRIWSVRTLNELLR-----ISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTA  214 (515)
Q Consensus       140 ~~~~~d~~i~iw~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~  214 (515)
                      ++++.++.|++||+.+++....     +..|...+.+++|+|+++.+++++.|+.|++||+++++....+ ..|...+.+
T Consensus       138 ~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~-~~~~~~~~~  216 (433)
T 3bws_A          138 IPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATV-DLTGKWSKI  216 (433)
T ss_dssp             EEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEE-ECSSSSEEE
T ss_pred             EEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEE-cCCCCCeeE
Confidence            6666688999999999988763     3367779999999999999999999999999999999988887 478899999


Q ss_pred             EEEcCCCCEEE-EecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEe--------CCCcEEEEEcccc
Q psy17610        215 LAITQDGTRLL-SGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAS--------TDGTCVLWDLIKS  285 (515)
Q Consensus       215 ~~~~~~~~~l~-~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--------~d~~i~iwd~~~~  285 (515)
                      ++|+|+++.++ +++.|+.|++||++.  ......+.. ...+.+++|+|+++.+++++        .|+.|++||+.++
T Consensus       217 ~~~~~~~~~l~~~~~~~~~i~~~d~~~--~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~  293 (433)
T 3bws_A          217 LLYDPIRDLVYCSNWISEDISVIDRKT--KLEIRKTDK-IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKE  293 (433)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEETTT--TEEEEECCC-CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTT
T ss_pred             EEEcCCCCEEEEEecCCCcEEEEECCC--CcEEEEecC-CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCC
Confidence            99999999885 555899999999954  344444544 34589999999999999888        5889999999999


Q ss_pred             eEEEEEEcCccEEEEEEcCCCcEE-EEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcC-------
Q psy17610        286 TRLIIMILPSMIMSAAYHPSEVQL-ITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA-------  357 (515)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-------  357 (515)
                      +..........+..++|+|+++.+ ++++.++.+++||+.+++.+..+...  ..+.+++|+|+|+++++++.       
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~~~~~~  371 (433)
T 3bws_A          294 KLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVF--DKPNTIALSPDGKYLYVSCRGPNHPTE  371 (433)
T ss_dssp             EEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECS--SSEEEEEECTTSSEEEEEECCCCCTTT
T ss_pred             cEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCC--CCCCeEEEcCCCCEEEEEecCCCcccc
Confidence            888888777789999999999765 55578999999999999988887643  67899999999999888876       


Q ss_pred             --------CCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeC-CCcEEEEeCCC
Q psy17610        358 --------DQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSA-DGGIFLWTFPE  410 (515)
Q Consensus       358 --------dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~iw~~~~  410 (515)
                              ||.|++||+.+++.+..+.. ...+.+++|+|++++|++++. |+.|++|++..
T Consensus       372 ~~~~~g~~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~  432 (433)
T 3bws_A          372 GYLKKGLVLGKVYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG  432 (433)
T ss_dssp             CTTSCCSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred             ccccccccceEEEEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence                    57999999999988888765 457899999999999998875 99999999753

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=100.00  E-value=1.6e-36  Score=284.28  Aligned_cols=285  Identities=12%  Similarity=0.179  Sum_probs=237.3

Q ss_pred             CcEEEEEEecCCCEEE-EEecCceEEEEECCCCce---eEEeeccCccCeEEEEeCC-CCcEEEEEecCCcEEEEeCCCC
Q psy17610         82 SGISSLQYNPVNNKVF-VGTVNCEIFLIDMNSGFT---LTLVNTCHTSAIYDLQFPV-NFSSVFATCSKNDIRIWSVRTL  156 (515)
Q Consensus        82 ~~v~~~~~s~~~~~l~-~~~~d~~i~iw~~~~~~~---~~~~~~~h~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~  156 (515)
                      .....++++|+...++ +++.||.|++|++.....   ....+.+|.++|.+++|+| ++..|++++.|+.|++||+.++
T Consensus        35 ~~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~  114 (402)
T 2aq5_A           35 WDSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDG  114 (402)
T ss_dssp             CSSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTT
T ss_pred             cCCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCC
Confidence            3445688998775444 478899999999966322   2334678999999999999 8999999999999999999988


Q ss_pred             -------ceeEEEEecCeEEEEEEEeeCC-CEEEEEeCCCeEEEEecCCCceEEEec-CCCCCCeEEEEEcCCCCEEEEe
Q psy17610        157 -------NELLRISVMNMICACIVFTYDG-KAILSGWNDGFIRCFTPQSGKLKFIIP-NAHNRGVTALAITQDGTRLLSG  227 (515)
Q Consensus       157 -------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~  227 (515)
                             +.+..+.+|...|.+++|+|++ ++|++++.|+.|++||+++++....+. ..|...|.+++|+|++++|+++
T Consensus       115 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  194 (402)
T 2aq5_A          115 GLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTS  194 (402)
T ss_dssp             CCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEE
T ss_pred             CCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEE
Confidence                   6788899999999999999998 699999999999999999999888874 5799999999999999999999


Q ss_pred             cCCCcEEEEEccCCceeeEEee-ccccCc-eEEEEEecCCCEEEEE---eCCCcEEEEEcccceE---EEEEEcCccEEE
Q psy17610        228 GGEGQVRIWKLTRESQSLQCVL-KEHTSS-VSVIQIKSDSKEAMSA---STDGTCVLWDLIKSTR---LIIMILPSMIMS  299 (515)
Q Consensus       228 ~~d~~i~iw~~~~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~l~~~---~~d~~i~iwd~~~~~~---~~~~~~~~~~~~  299 (515)
                      +.|+.|++||++.  ......+ ..|... +..+.|+|++.+++++   +.|+.|++||+++.+.   .........+..
T Consensus       195 ~~d~~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~  272 (402)
T 2aq5_A          195 CRDKRVRVIEPRK--GTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLL  272 (402)
T ss_dssp             ETTSEEEEEETTT--TEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEE
T ss_pred             ecCCcEEEEeCCC--CceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeE
Confidence            9999999999964  4445555 677765 8999999999999998   7899999999988654   333345667999


Q ss_pred             EEEcCCCcEEEEEE-CCCeEEEEeCCCCce-EEEEecC-CCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCe
Q psy17610        300 AAYHPSEVQLITCS-TNKMIDYWETCDGSI-IRSLEGS-DVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGV  370 (515)
Q Consensus       300 ~~~~~~~~~l~~~~-~~~~i~~~d~~~~~~-~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~  370 (515)
                      ++|+|+++++++++ .|+.|++||+.+++. +..+..+ +...+.+++|+|++.++++  .++.+++|++.++.
T Consensus       273 ~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~  344 (402)
T 2aq5_A          273 PFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHERK  344 (402)
T ss_dssp             EEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTE
T ss_pred             EEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee--cceeEEEEEcCCCc
Confidence            99999999997554 699999999999884 4444322 3478999999999998764  45699999998754

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=100.00  E-value=5.9e-36  Score=280.40  Aligned_cols=250  Identities=15%  Similarity=0.244  Sum_probs=213.4

Q ss_pred             EecCCCcEEEEEEec-CCCEEEEEecCceEEEEECCCCc------eeEEeeccCccCeEEEEeCCCC-cEEEEEecCCcE
Q psy17610         77 LLKDDSGISSLQYNP-VNNKVFVGTVNCEIFLIDMNSGF------TLTLVNTCHTSAIYDLQFPVNF-SSVFATCSKNDI  148 (515)
Q Consensus        77 ~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~iw~~~~~~------~~~~~~~~h~~~v~~~~~~~~~-~~l~~~~~d~~i  148 (515)
                      +.+|.+.|++++|+| ++++|++|+.||.|++||+.++.      .....+.+|...|.+++|+|++ ..|++++.|+.|
T Consensus        77 ~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i  156 (402)
T 2aq5_A           77 VCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVI  156 (402)
T ss_dssp             BCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCE
T ss_pred             EecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEE
Confidence            346999999999999 99999999999999999999863      3345667899999999999998 689999999999


Q ss_pred             EEEeCCCCceeEEE--EecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCC-eEEEEEcCCCCEEE
Q psy17610        149 RIWSVRTLNELLRI--SVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRG-VTALAITQDGTRLL  225 (515)
Q Consensus       149 ~iw~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~  225 (515)
                      ++||+++++.+..+  ..|...|.+++|+|++++|++++.|+.|++||+++++....+...|... +.++.|+|++++|+
T Consensus       157 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  236 (402)
T 2aq5_A          157 LVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILT  236 (402)
T ss_dssp             EEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEE
T ss_pred             EEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEE
Confidence            99999999999888  7899999999999999999999999999999999999888874577665 89999999999999


Q ss_pred             Ee---cCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEE-eCCCcEEEEEcccce----EEEEEEcCccE
Q psy17610        226 SG---GGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSA-STDGTCVLWDLIKST----RLIIMILPSMI  297 (515)
Q Consensus       226 ~~---~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~----~~~~~~~~~~~  297 (515)
                      +|   +.|+.|++||++............|...+..++|+|++++++++ +.|+.|++||+.+++    .+..+.+...+
T Consensus       237 ~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v  316 (402)
T 2aq5_A          237 TGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQ  316 (402)
T ss_dssp             EEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCC
T ss_pred             EeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcc
Confidence            99   79999999999754433333334577889999999999998754 579999999999876    23333445789


Q ss_pred             EEEEEcCCCcEEEEEECCCeEEEEeCCCCce
Q psy17610        298 MSAAYHPSEVQLITCSTNKMIDYWETCDGSI  328 (515)
Q Consensus       298 ~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~  328 (515)
                      .+++|+|++.++++  .++.+++|++.+++.
T Consensus       317 ~~~~~sp~~~~~~s--~~~~~~~~~l~~~~~  345 (402)
T 2aq5_A          317 RGMGYMPKRGLEVN--KCEIARFYKLHERKC  345 (402)
T ss_dssp             SEEEECCGGGSCGG--GTEEEEEEEEETTEE
T ss_pred             cceEEeccccccee--cceeEEEEEcCCCcE
Confidence            99999999988764  567999999877543

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=100.00  E-value=1.5e-33  Score=263.40  Aligned_cols=347  Identities=15%  Similarity=0.150  Sum_probs=260.0

Q ss_pred             EEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEE-EEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEE
Q psy17610        138 SVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAI-LSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALA  216 (515)
Q Consensus       138 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~  216 (515)
                      .+++++.|+.|++||+++++.+..+..+.. +.+++|+|+++++ ++++.++.|++||+.+++....+. . ...+.+++
T Consensus         4 l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~-~-~~~v~~~~   80 (391)
T 1l0q_A            4 AYIANSESDNISVIDVTSNKVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVP-A-GSSPQGVA   80 (391)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEEECSSS-EEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-C-SSSEEEEE
T ss_pred             EEEEcCCCCEEEEEECCCCeEEEEeecCCC-cceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEE-C-CCCccceE
Confidence            456666799999999999999888886654 7999999999987 566689999999999999988874 3 33899999


Q ss_pred             EcCCCCEEE-EecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEE-EEEeCCCcEEEEEcccceEEEEEEcC
Q psy17610        217 ITQDGTRLL-SGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEA-MSASTDGTCVLWDLIKSTRLIIMILP  294 (515)
Q Consensus       217 ~~~~~~~l~-~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~  294 (515)
                      |+|++++|+ +++.++.|++||+...  .....+.. ...+.+++|+|+++.+ ++++.++.|++||+.+++....+...
T Consensus        81 ~spdg~~l~~~~~~~~~v~v~d~~~~--~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~  157 (391)
T 1l0q_A           81 VSPDGKQVYVTNMASSTLSVIDTTSN--TVAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG  157 (391)
T ss_dssp             ECTTSSEEEEEETTTTEEEEEETTTT--EEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC
T ss_pred             ECCCCCEEEEEECCCCEEEEEECCCC--eEEEEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC
Confidence            999999875 5556799999999643  34444444 4568999999999987 67778999999999999999988888


Q ss_pred             ccEEEEEEcCCCcEE-EEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEc---CCCeEEEEEccCCe
Q psy17610        295 SMIMSAAYHPSEVQL-ITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGG---ADQIVKMWMYREGV  370 (515)
Q Consensus       295 ~~~~~~~~~~~~~~l-~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~---~dg~i~i~d~~~~~  370 (515)
                      ..+..++|+|+++.+ +++..++.|++||+++++....+...  ..+.+++|+|+++++++++   .++.|++||+.+++
T Consensus       158 ~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~--~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~  235 (391)
T 1l0q_A          158 RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVE--AAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNK  235 (391)
T ss_dssp             SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS--SEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTE
T ss_pred             CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecC--CCccceEECCCCCEEEEEecCcCCCcEEEEECCCCe
Confidence            889999999999988 56677899999999999888877754  6789999999999999887   68999999999998


Q ss_pred             eeeeccCCCCCeeEEEECCCCcEE-EEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecC-cccEEEee
Q psy17610        371 PCFVGIGHAASITKIKISPDKKVI-VSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMIL-PSMIMSAA  448 (515)
Q Consensus       371 ~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~  448 (515)
                      .+..+..|. .+.+++|+|++++| ++++.|+.|++||+...+.............      ........+ ........
T Consensus       236 ~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~a~  308 (391)
T 1l0q_A          236 ITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGKNPYA------SGQFIGSIPVQPVYPSAD  308 (391)
T ss_dssp             EEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEC------CSSCEEECSSCCCCCBCC
T ss_pred             EEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCcCCCc------cceeeecccccccccccc
Confidence            888887765 57899999999877 5668899999999987542211100000000      000000000 00011112


Q ss_pred             eccC--------C--cEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEe---ecCC
Q psy17610        449 YHPS--------E--VQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTG---GADQ  506 (515)
Q Consensus       449 ~s~~--------~--~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~---~~dg  506 (515)
                      |+.+        .  ..+...+.+...++|+..+|....    +. .  ....|+|+|.|.++.   +.||
T Consensus       309 fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~g~~~~----~~-~--~~~~~~~~g~y~~~~~~~~~~g  372 (391)
T 1l0q_A          309 FKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDGSSSK----KQ-N--PTHTYSETGIYTVRLTVSNSNG  372 (391)
T ss_dssp             EEESCCSSEEETTCCEEEEECCBSCSEEEEECSSSCEEC----SS-S--CEECCSSCEEEEEEEEEEETTE
T ss_pred             cccccccccccccceEEEEeCCCCceEEEEECCCCcccC----cC-C--CeEEeCCCceEEEEEEEECCCC
Confidence            2221        1  346666778899999998886421    11 2  235799999887764   3566

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=7.8e-35  Score=276.68  Aligned_cols=284  Identities=12%  Similarity=0.048  Sum_probs=235.4

Q ss_pred             ccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCc---eeEEEEecC----------------------------------
Q psy17610        124 TSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLN---ELLRISVMN----------------------------------  166 (515)
Q Consensus       124 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~---~~~~~~~~~----------------------------------  166 (515)
                      ..++.+++|+|+|+ +++++.++.|++||+.+++   .+..+..+.                                  
T Consensus         4 ~~p~~~v~~s~dg~-~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (450)
T 2vdu_B            4 IHPLQNLLTSRDGS-LVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD   82 (450)
T ss_dssp             ECCCCEEEECSSSS-EEEEEETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred             cccEEEEEecCCCC-EEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence            35789999999998 4555568899999999998   555554322                                  


Q ss_pred             --------------------eEEEEEEEeeCCCEE-EEEeCCCeEEEEecC--CCceEEEecC-CCCCCeEEEEEcCCCC
Q psy17610        167 --------------------MICACIVFTYDGKAI-LSGWNDGFIRCFTPQ--SGKLKFIIPN-AHNRGVTALAITQDGT  222 (515)
Q Consensus       167 --------------------~~v~~~~~~~~~~~l-~~~~~dg~i~~~~~~--~~~~~~~~~~-~~~~~v~~~~~~~~~~  222 (515)
                                          ..|.+++|+|++++| ++++.||.|++||+.  +++....+.. .|...|.+++|+|+++
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~  162 (450)
T 2vdu_B           83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT  162 (450)
T ss_dssp             -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred             cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC
Confidence                                259999999999996 889999999999999  8887776632 5678999999999999


Q ss_pred             EEEEecCCCcEEEEEccCCcee--eEEeeccccCceEEEEEecC---CCEEEEEeCCCcEEEEEcccceEEEEEE--cCc
Q psy17610        223 RLLSGGGEGQVRIWKLTRESQS--LQCVLKEHTSSVSVIQIKSD---SKEAMSASTDGTCVLWDLIKSTRLIIMI--LPS  295 (515)
Q Consensus       223 ~l~~~~~d~~i~iw~~~~~~~~--~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~--~~~  295 (515)
                      +|++++.+|.+++|++......  ....+.+|...|.+++|+|+   +++|++++.|+.|++||+++++.+..+.  +..
T Consensus       163 ~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~  242 (450)
T 2vdu_B          163 TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKH  242 (450)
T ss_dssp             EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSS
T ss_pred             EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCC
Confidence            9999999999999998644322  33366789999999999999   9999999999999999999888776643  556


Q ss_pred             cEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecC------------------------CCccEEEEEEcCCCCE
Q psy17610        296 MIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGS------------------------DVAAVNCVDFVDDGKY  351 (515)
Q Consensus       296 ~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~------------------------~~~~i~~~~~~~~~~~  351 (515)
                      .+.+++|+ ++++|++++.|+.|++||+.+++.+..+..+                        ....+.+++|+|++++
T Consensus       243 ~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~  321 (450)
T 2vdu_B          243 FVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPF  321 (450)
T ss_dssp             CEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSE
T ss_pred             ceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCE
Confidence            89999999 9999999999999999999999998888632                        1256889999999999


Q ss_pred             EEEEc-CCCeEEEEEc--cCC---eeeeeccCCCCCeeEEEECCCCcEEEEE-eC------CCcEEEEeCCCC
Q psy17610        352 FLTGG-ADQIVKMWMY--REG---VPCFVGIGHAASITKIKISPDKKVIVSV-SA------DGGIFLWTFPEL  411 (515)
Q Consensus       352 l~~~~-~dg~i~i~d~--~~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~------dg~i~iw~~~~~  411 (515)
                      +++++ .++.|++|++  .++   +.+..+..| ..|.+++|+|++ ++++. +.      +..|.+|.+...
T Consensus       322 l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~-~~v~~~~~~~~~~~~~~i~v~~~~~~  392 (450)
T 2vdu_B          322 VAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDE-FQVTLDNKESSGVQKNFAKFIEYNLN  392 (450)
T ss_dssp             EEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTE-EEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred             EEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCc-EEEEEecccCCCCCCcceEEEEEEcC
Confidence            99998 8999999999  555   667777777 889999999965 44444 32      455899987543

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=100.00  E-value=1.1e-34  Score=266.07  Aligned_cols=288  Identities=8%  Similarity=0.062  Sum_probs=212.6

Q ss_pred             EEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEE-EE
Q psy17610        192 CFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEA-MS  270 (515)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~  270 (515)
                      +|++.+.+.+... ..|...|.+++|+|+|++|++|+.++ +++|+...  ......  .+...+..+++.++++.+ ++
T Consensus         3 i~s~~~~~~~~~~-~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~   76 (355)
T 3vu4_A            3 LGSMITRNPIVPE-NHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHP--VAHIMS--QEMRHLSKVRMLHRTNYVAFV   76 (355)
T ss_dssp             -----------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETT--EEEEEE--EECSCCCEEEECTTSSEEEEE
T ss_pred             cccccccCCcccc-ccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCC--cceeee--eecCCeEEEEEcCCCCEEEEE
Confidence            4556666665554 68999999999999999999998775 78999853  322222  222357788888888887 56


Q ss_pred             EeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCC-ceEEEEecCCCccEEEEEEcCCC
Q psy17610        271 ASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDG-SIIRSLEGSDVAAVNCVDFVDDG  349 (515)
Q Consensus       271 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~-~~~~~~~~~~~~~i~~~~~~~~~  349 (515)
                      ++.|++|++||+.+++.+..+..+..+.++.++++.  ++++ .++.|++||+.++ +.+..+..    +...+++++  
T Consensus        77 ~~~d~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~----~~~~~~~s~--  147 (355)
T 3vu4_A           77 TGVKEVVHIWDDVKKQDVSRIKVDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR----FGGVCEFSN--  147 (355)
T ss_dssp             CSSTTEEEEEETTTTEEEEEEECSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE----EEEEEEEET--
T ss_pred             ECCccEEEEEECCCCcEEEEEECCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc----CCceEEEEc--
Confidence            777899999999999999999999999999998874  3333 4789999999988 66555544    333456666  


Q ss_pred             CEEEE--EcCCCeEEEEEccCCe---------------e-eeeccCCCCCeeEEEECCCCcEEEEEeCCCc-EEEEeCCC
Q psy17610        350 KYFLT--GGADQIVKMWMYREGV---------------P-CFVGIGHAASITKIKISPDKKVIVSVSADGG-IFLWTFPE  410 (515)
Q Consensus       350 ~~l~~--~~~dg~i~i~d~~~~~---------------~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~-i~iw~~~~  410 (515)
                      .++++  |+.+|.|++||++++.               + +..+.+|...|++++|+|++++|++++.|++ |++||+.+
T Consensus       148 ~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~  227 (355)
T 3vu4_A          148 GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTED  227 (355)
T ss_dssp             TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTT
T ss_pred             cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence            56665  6899999999998765               2 6778899999999999999999999999998 99999976


Q ss_pred             CcCccCCCcccceeeecccccccceeee-c-CcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeee--eee-------
Q psy17610        411 LEDDVGDSRSLSSKISRSTARSTRLIIM-I-LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSII--RSL-------  479 (515)
Q Consensus       411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~--~~~-------  479 (515)
                      .+.                    ...+. + |...|.+++|+|++++|++++.|+.|++||+.++...  ..+       
T Consensus       228 ~~~--------------------~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~  287 (355)
T 3vu4_A          228 GVL--------------------VREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMK  287 (355)
T ss_dssp             CCE--------------------EEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECC
T ss_pred             CcE--------------------EEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeecc
Confidence            531                    11122 2 6788999999999999999999999999999765321  111       


Q ss_pred             -------------cccccceEEEEEEcCCCcEEEEeecCCeEEEEEEe
Q psy17610        480 -------------EGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLYI  514 (515)
Q Consensus       480 -------------~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~  514 (515)
                                   ......+...++|++|+++|++++.||.+++|++.
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~  335 (355)
T 3vu4_A          288 YFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVV  335 (355)
T ss_dssp             CCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEE
T ss_pred             ccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEE
Confidence                         11111234679999999999999999999999874

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.1e-34  Score=275.58  Aligned_cols=279  Identities=14%  Similarity=0.055  Sum_probs=229.5

Q ss_pred             CcEEEEEEecCCCEEEEEecCceEEEEECCCCc---eeEEee--------------------------------------
Q psy17610         82 SGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGF---TLTLVN--------------------------------------  120 (515)
Q Consensus        82 ~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~---~~~~~~--------------------------------------  120 (515)
                      .++.+++|+|+|++|+++ .++.|++||+.+|+   .+....                                      
T Consensus         5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (450)
T 2vdu_B            5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS   83 (450)
T ss_dssp             CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred             ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence            578999999999966655 57799999998876   322211                                      


Q ss_pred             ---------------ccCccCeEEEEeCCCCcEE-EEEecCCcEEEEeCC--CCceeEEEE--ecCeEEEEEEEeeCCCE
Q psy17610        121 ---------------TCHTSAIYDLQFPVNFSSV-FATCSKNDIRIWSVR--TLNELLRIS--VMNMICACIVFTYDGKA  180 (515)
Q Consensus       121 ---------------~~h~~~v~~~~~~~~~~~l-~~~~~d~~i~iw~~~--~~~~~~~~~--~~~~~v~~~~~~~~~~~  180 (515)
                                     .+|.+.|.+++|+|++++| ++++.|+.|++||+.  +++.+..+.  .+...|.+++|+|++++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~  163 (450)
T 2vdu_B           84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTT  163 (450)
T ss_dssp             ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSE
T ss_pred             ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCE
Confidence                           1344479999999999997 777789999999999  888888876  56688999999999999


Q ss_pred             EEEEeCCCeEEEEecCCCceEE----EecCCCCCCeEEEEEcCC---CCEEEEecCCCcEEEEEccCCceeeEEe-eccc
Q psy17610        181 ILSGWNDGFIRCFTPQSGKLKF----IIPNAHNRGVTALAITQD---GTRLLSGGGEGQVRIWKLTRESQSLQCV-LKEH  252 (515)
Q Consensus       181 l~~~~~dg~i~~~~~~~~~~~~----~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~iw~~~~~~~~~~~~-~~~~  252 (515)
                      |++++.+|.+++|++.+++...    .+ .+|...|.+++|+|+   +++|++++.|+.|++||+...  ..... +.+|
T Consensus       164 l~~~~~~g~v~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~--~~~~~~~~~h  240 (450)
T 2vdu_B          164 VIIADKFGDVYSIDINSIPEEKFTQEPI-LGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQC--FIVDKWLFGH  240 (450)
T ss_dssp             EEEEETTSEEEEEETTSCCCSSCCCCCS-EECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCT--TCEEEECCCC
T ss_pred             EEEEeCCCcEEEEecCCcccccccceee-ecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCC--ceeeeeecCC
Confidence            9999999999999998876542    33 578999999999999   999999999999999999643  33333 5689


Q ss_pred             cCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC--------------------------ccEEEEEEcCCC
Q psy17610        253 TSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP--------------------------SMIMSAAYHPSE  306 (515)
Q Consensus       253 ~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~  306 (515)
                      ...|.+++|+ ++++|++++.|+.|++||+.+++.+..+...                          ..+..++++|++
T Consensus       241 ~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~  319 (450)
T 2vdu_B          241 KHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNL  319 (450)
T ss_dssp             SSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSS
T ss_pred             CCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCC
Confidence            9999999999 9999999999999999999999888777532                          358899999999


Q ss_pred             cEEEEEE-CCCeEEEEeC--CCC---ceEEEEecCCCccEEEEEEcCCCCEEEEEcC------CCeEEEEEcc
Q psy17610        307 VQLITCS-TNKMIDYWET--CDG---SIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA------DQIVKMWMYR  367 (515)
Q Consensus       307 ~~l~~~~-~~~~i~~~d~--~~~---~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~------dg~i~i~d~~  367 (515)
                      +++++++ .++.|++|++  ..+   +.+..+..+  ..+.+++|+|++.++++++.      +..|.+|.+.
T Consensus       320 ~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~--~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~  390 (450)
T 2vdu_B          320 PFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP--YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYN  390 (450)
T ss_dssp             SEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS--SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEE
T ss_pred             CEEEEEECCCCeEEEEEeccCCCCceeeccEeccC--CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEE
Confidence            9999999 8999999999  555   666667765  78999999996544444443      4457787764

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=100.00  E-value=3.6e-35  Score=269.27  Aligned_cols=309  Identities=11%  Similarity=0.077  Sum_probs=216.8

Q ss_pred             EEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEE-EEec
Q psy17610        150 IWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRL-LSGG  228 (515)
Q Consensus       150 iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~  228 (515)
                      ||++.+.+.+.....|...|.+++|+|||++|++|+.++ +++|+.++++......   ...+..+++.++++.+ ++++
T Consensus         3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~   78 (355)
T 3vu4_A            3 LGSMITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQE---MRHLSKVRMLHRTNYVAFVTG   78 (355)
T ss_dssp             ----------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEE---CSCCCEEEECTTSSEEEEECS
T ss_pred             cccccccCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeee---cCCeEEEEEcCCCCEEEEEEC
Confidence            567777777777888999999999999999999998775 7899999887665542   2257788898888877 5678


Q ss_pred             CCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccc-eEEEEEEcCccEEEEEEcCCCc
Q psy17610        229 GEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKS-TRLIIMILPSMIMSAAYHPSEV  307 (515)
Q Consensus       229 ~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~  307 (515)
                      .|+.|++||..+  ......+. +...|.++.++++.  ++++ .|+.|++||+.++ +.+..+..  +...+++++  .
T Consensus        79 ~d~~v~iWd~~~--~~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~--~~~~~~~s~--~  148 (355)
T 3vu4_A           79 VKEVVHIWDDVK--KQDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR--FGGVCEFSN--G  148 (355)
T ss_dssp             STTEEEEEETTT--TEEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE--EEEEEEEET--T
T ss_pred             CccEEEEEECCC--CcEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc--CCceEEEEc--c
Confidence            889999999954  34444444 66789999998763  4443 4789999999887 54444433  444566666  5


Q ss_pred             EEEE--EECCCeEEEEeCCCCc---------------e-EEEEecCCCccEEEEEEcCCCCEEEEEcCCCe-EEEEEccC
Q psy17610        308 QLIT--CSTNKMIDYWETCDGS---------------I-IRSLEGSDVAAVNCVDFVDDGKYFLTGGADQI-VKMWMYRE  368 (515)
Q Consensus       308 ~l~~--~~~~~~i~~~d~~~~~---------------~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~-i~i~d~~~  368 (515)
                      .+++  ++.+|.|++||+.+++               + +..+..|. ..|.+++|+|+|++|++++.|++ |++||+++
T Consensus       149 ~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~-~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~  227 (355)
T 3vu4_A          149 LLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHT-NPIKMVRLNRKSDMVATCSQDGTIIRVFKTED  227 (355)
T ss_dssp             EEEEEESSCTTCEEEEECCC------------------CCEEECCCS-SCEEEEEECTTSSEEEEEETTCSEEEEEETTT
T ss_pred             EEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccC-CceEEEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence            6665  5789999999999865               1 56666665 89999999999999999999998 99999999


Q ss_pred             Ceeeeecc-C-CCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCC-cc-cceeeeccccc-ccceeeecCccc
Q psy17610        369 GVPCFVGI-G-HAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDS-RS-LSSKISRSTAR-STRLIIMILPSM  443 (515)
Q Consensus       369 ~~~~~~~~-~-~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~-~~-~~~~~~~~~~~-~~~~~~~~~~~~  443 (515)
                      ++++..+. + |...|++++|+|++++|++++.|+.|++||+.......... .. ........... ............
T Consensus       228 ~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (355)
T 3vu4_A          228 GVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVR  307 (355)
T ss_dssp             CCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCC
T ss_pred             CcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCC
Confidence            99999987 5 99999999999999999999999999999997653211100 00 00000000000 000000111223


Q ss_pred             EEEeeeccCCcEEEEeecCCeEEEEecCCC
Q psy17610        444 IMSAAYHPSEVQLITCSTNKMIDYWETCDG  473 (515)
Q Consensus       444 i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~  473 (515)
                      ...++|+|++++|++++.||.+++|++..+
T Consensus       308 ~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~  337 (355)
T 3vu4_A          308 GCKIAWISESSLVVVWPHTRMIETFKVVFD  337 (355)
T ss_dssp             CCEEEESSSSEEEEEETTTTEEEEEEEEEE
T ss_pred             ceEEEEeCCCCEEEEEeCCCeEEEEEEEcC
Confidence            467899999999999999999999998654

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.2e-35  Score=299.22  Aligned_cols=255  Identities=15%  Similarity=0.216  Sum_probs=211.3

Q ss_pred             EeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCC--CCceeEEEEecCeEEEEEEEeeC--CCEEEEEeCCCeEEEE
Q psy17610        118 LVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVR--TLNELLRISVMNMICACIVFTYD--GKAILSGWNDGFIRCF  193 (515)
Q Consensus       118 ~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~~~  193 (515)
                      .++.+|.++|++++|+|+++++++++.||.|++||+.  +++.+..+.+|..+|.+++|+|+  +++|++++.||.|++|
T Consensus         3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vw   82 (753)
T 3jro_A            3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW   82 (753)
T ss_dssp             -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEE
T ss_pred             eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEE
Confidence            4567899999999999999999999999999999998  55677788899999999999998  9999999999999999


Q ss_pred             ecCCCc--eEEEecCCCCCCeEEEEEcCC--CCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecC-----
Q psy17610        194 TPQSGK--LKFIIPNAHNRGVTALAITQD--GTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSD-----  264 (515)
Q Consensus       194 ~~~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----  264 (515)
                      |+.+++  ....+ ..|...|.+++|+|+  ++.+++|+.||.|++||++.........+.+|...|.+++|+|.     
T Consensus        83 d~~~~~~~~~~~~-~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~  161 (753)
T 3jro_A           83 KEENGRWSQIAVH-AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEED  161 (753)
T ss_dssp             EEETTEEEEEEEE-CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC----
T ss_pred             ECCCCcccccccc-cCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccc
Confidence            999987  45555 689999999999999  99999999999999999986655556677889999999999994     


Q ss_pred             --------CCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCC
Q psy17610        265 --------SKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSD  336 (515)
Q Consensus       265 --------~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~  336 (515)
                              +..+++++.||.|++||++++...                                     ......+..+.
T Consensus       162 ~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~-------------------------------------~~~~~~~~~h~  204 (753)
T 3jro_A          162 GEHNGTKESRKFVTGGADNLVKIWKYNSDAQT-------------------------------------YVLESTLEGHS  204 (753)
T ss_dssp             -----CGGGCCEEEEETTSCEEEEEEETTTTE-------------------------------------EEEEEEECCCS
T ss_pred             cccccCCCCCEEEEEECCCeEEEEeccCCccc-------------------------------------ceeeeeecCCC
Confidence                    566666666666666665432100                                     02233444444


Q ss_pred             CccEEEEEEcCC---CCEEEEEcCCCeEEEEEccCCe-----eeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeC
Q psy17610        337 VAAVNCVDFVDD---GKYFLTGGADQIVKMWMYREGV-----PCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTF  408 (515)
Q Consensus       337 ~~~i~~~~~~~~---~~~l~~~~~dg~i~i~d~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~  408 (515)
                       ..|.+++|+|+   ++++++++.||.|++||+.++.     .......|...|++++|+|++++|++++.||.|++|++
T Consensus       205 -~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~  283 (753)
T 3jro_A          205 -DWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE  283 (753)
T ss_dssp             -SCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBC
T ss_pred             -CcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEec
Confidence             88999999999   9999999999999999998864     33444568899999999999999999999999999999


Q ss_pred             CCC
Q psy17610        409 PEL  411 (515)
Q Consensus       409 ~~~  411 (515)
                      ...
T Consensus       284 ~~~  286 (753)
T 3jro_A          284 NLE  286 (753)
T ss_dssp             CSS
T ss_pred             CCC
Confidence            853

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.5e-36  Score=304.08  Aligned_cols=251  Identities=16%  Similarity=0.267  Sum_probs=215.5

Q ss_pred             EEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCC-ceeEEeeccCccCeEEEEeCCC--CcEEEEEecCCcEEEEe
Q psy17610         76 YLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSG-FTLTLVNTCHTSAIYDLQFPVN--FSSVFATCSKNDIRIWS  152 (515)
Q Consensus        76 ~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~-~~~~~~~~~h~~~v~~~~~~~~--~~~l~~~~~d~~i~iw~  152 (515)
                      .+.+|.+.|++++|+|++++|++|+.||.|++||+.++ ......+.+|.++|.+++|+|+  ++.+++++.||.|++||
T Consensus         4 ~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd   83 (753)
T 3jro_A            4 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK   83 (753)
T ss_dssp             ----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEE
T ss_pred             ecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEE
Confidence            45689999999999999999999999999999999742 3445567789999999999988  89999999999999999


Q ss_pred             CCCCc--eeEEEEecCeEEEEEEEeeC--CCEEEEEeCCCeEEEEecCCCce--EEEecCCCCCCeEEEEEcC-------
Q psy17610        153 VRTLN--ELLRISVMNMICACIVFTYD--GKAILSGWNDGFIRCFTPQSGKL--KFIIPNAHNRGVTALAITQ-------  219 (515)
Q Consensus       153 ~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~-------  219 (515)
                      +.+++  .+..+..|...|.+++|+|+  ++.+++++.||.|++||+.++..  ...+ ..|...|.+++|+|       
T Consensus        84 ~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~-~~~~~~v~~l~~~p~~~~~~~  162 (753)
T 3jro_A           84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIII-DAHAIGVNSASWAPATIEEDG  162 (753)
T ss_dssp             EETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEE-ECCSSCEEEEEECCCC-----
T ss_pred             CCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEe-ecCCCceEEEEecCccccccc
Confidence            99887  67777789999999999999  99999999999999999988732  2333 58999999999999       


Q ss_pred             ------CCCEEEEecCCCcEEEEEccCCce--eeEEeeccccCceEEEEEecC---CCEEEEEeCCCcEEEEEcccceEE
Q psy17610        220 ------DGTRLLSGGGEGQVRIWKLTRESQ--SLQCVLKEHTSSVSVIQIKSD---SKEAMSASTDGTCVLWDLIKSTRL  288 (515)
Q Consensus       220 ------~~~~l~~~~~d~~i~iw~~~~~~~--~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~  288 (515)
                            ++..+++|+.||.|++||++....  .....+.+|...|.+++|+|+   ++++++++.||.|++||+.+++..
T Consensus       163 ~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~  242 (753)
T 3jro_A          163 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGP  242 (753)
T ss_dssp             ----CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSC
T ss_pred             ccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCc
Confidence                  589999999999999999975432  556678899999999999999   899999999999999999876321


Q ss_pred             ------EEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCc
Q psy17610        289 ------IIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGS  327 (515)
Q Consensus       289 ------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~  327 (515)
                            ....+...+.+++|+|+++++++++.||.|++|++..+.
T Consensus       243 ~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~  287 (753)
T 3jro_A          243 WKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG  287 (753)
T ss_dssp             CBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSSS
T ss_pred             ceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCC
Confidence                  111244578999999999999999999999999998654

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1e-34  Score=265.65  Aligned_cols=277  Identities=11%  Similarity=0.024  Sum_probs=222.7

Q ss_pred             EEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccc
Q psy17610        173 VFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEH  252 (515)
Q Consensus       173 ~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~  252 (515)
                      .+.+++..+++|+.||.|++||+.+++.+..+.   ...|.++.|+|+   +++++.|+.|++|+...            
T Consensus        43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~---~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~------------  104 (343)
T 3lrv_A           43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT---TPNPRTGGEHPA---IISRGPCNRLLLLYPGN------------  104 (343)
T ss_dssp             SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE---EECCCTTCCCCS---EEEECSTTEEEEEETTT------------
T ss_pred             hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe---cCCceeeeeCCc---eEEecCCCeEEEEEccC------------
Confidence            445678899999999999999999998887773   466778888887   99999999999999742            


Q ss_pred             cCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC--ccEEEEEEcC--CCcEEEEEECCCeEEEEeCCCCce
Q psy17610        253 TSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP--SMIMSAAYHP--SEVQLITCSTNKMIDYWETCDGSI  328 (515)
Q Consensus       253 ~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~--~~~~l~~~~~~~~i~~~d~~~~~~  328 (515)
                                             .+.+|++.+++.+......  .++.+++++|  +++++++++.|+.|++||+++++.
T Consensus       105 -----------------------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~  161 (343)
T 3lrv_A          105 -----------------------QITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQ  161 (343)
T ss_dssp             -----------------------EEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCE
T ss_pred             -----------------------ceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcE
Confidence                                   4567788777766665533  5799999999  999999999999999999999999


Q ss_pred             EEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeee-eeccC-CCCCeeEEEECCCCcEEEEEeCCCcEEEE
Q psy17610        329 IRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPC-FVGIG-HAASITKIKISPDKKVIVSVSADGGIFLW  406 (515)
Q Consensus       329 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~iw  406 (515)
                      ......++...+.+++|+|++++|++|+.||.|++||+++++.. ..+.. |..+|++++|+|++.+|++++ |+.|++|
T Consensus       162 ~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iw  240 (343)
T 3lrv_A          162 YIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCF  240 (343)
T ss_dssp             EEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEE
T ss_pred             EEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEE
Confidence            77776666568999999999999999999999999999999877 77777 999999999999999999999 5599999


Q ss_pred             eCCCCcCccCCCcccceeeecccccccceeeecCcccE--EEeeeccCCcEEEEeec-CCeEEEEecCCCeeeeeecccc
Q psy17610        407 TFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMI--MSAAYHPSEVQLITCST-NKMIDYWETCDGSIIRSLEGSD  483 (515)
Q Consensus       407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~~s~~~~~l~~~~~-dg~v~iwd~~~~~~~~~~~~~~  483 (515)
                      |++.......... ..                .+...+  .+++|+|++++|++++. |+.+++|++.+.......    
T Consensus       241 d~~~~~~~~~~~~-~~----------------~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~----  299 (343)
T 3lrv_A          241 DLRKDVGTLAYPT-YT----------------IPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK----  299 (343)
T ss_dssp             ETTSSTTCBSSCC-CB----------------C-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE----
T ss_pred             EcCCCCcceeecc-cc----------------cccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceEe----
Confidence            9987642211100 00                011112  46999999999999998 999999999765433222    


Q ss_pred             cceEEEEEEcC---CCcEEEEeecCCeEEEEEE
Q psy17610        484 VAAVNCVDFVD---DGKYFLTGGADQIVKICLY  513 (515)
Q Consensus       484 ~~~v~~~~~s~---~~~~l~s~~~dg~v~iw~~  513 (515)
                       .++..++|.|   +.+.|++++.||.++++-.
T Consensus       300 -~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~  331 (343)
T 3lrv_A          300 -DEESALCLQSDTADFTDMDVVCGDGGIAAILK  331 (343)
T ss_dssp             -EEEEECCC----CCCCEEEEEEETTEEEEEEE
T ss_pred             -cCceeEecCccccccceeEEEecCCceEEEEe
Confidence             5678889998   8889999999999988754

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=7.1e-35  Score=266.65  Aligned_cols=275  Identities=11%  Similarity=0.061  Sum_probs=221.6

Q ss_pred             EEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCe
Q psy17610         88 QYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNM  167 (515)
Q Consensus        88 ~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~  167 (515)
                      .+.+++.+|++|+.||.|++||+++++.+....   ...|.++.|+|+   +++++.|++|++|+...            
T Consensus        43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~---~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~------------  104 (343)
T 3lrv_A           43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT---TPNPRTGGEHPA---IISRGPCNRLLLLYPGN------------  104 (343)
T ss_dssp             SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE---EECCCTTCCCCS---EEEECSTTEEEEEETTT------------
T ss_pred             hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe---cCCceeeeeCCc---eEEecCCCeEEEEEccC------------
Confidence            344678899999999999999999876555443   567888899988   88999999999999764            


Q ss_pred             EEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcC--CCCEEEEecCCCcEEEEEccCCceee
Q psy17610        168 ICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQ--DGTRLLSGGGEGQVRIWKLTRESQSL  245 (515)
Q Consensus       168 ~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~iw~~~~~~~~~  245 (515)
                                           .+.+|++.+++.+......|..+|.+++|+|  +++++++++.||.|++||++....  
T Consensus       105 ---------------------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~--  161 (343)
T 3lrv_A          105 ---------------------QITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQ--  161 (343)
T ss_dssp             ---------------------EEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCE--
T ss_pred             ---------------------ceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcE--
Confidence                                 4677898888877777668889999999999  999999999999999999964433  


Q ss_pred             EEee-ccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEE-EEEEc--CccEEEEEEcCCCcEEEEEECCCeEEEE
Q psy17610        246 QCVL-KEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRL-IIMIL--PSMIMSAAYHPSEVQLITCSTNKMIDYW  321 (515)
Q Consensus       246 ~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~-~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~i~~~  321 (515)
                      .... ..|...+.+++|+|++.++++|+.||.|++||+++++.. ..+..  ..++.+++|+|++.+|++++. +.|++|
T Consensus       162 ~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~-~~v~iw  240 (343)
T 3lrv_A          162 YIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECD-QTVVCF  240 (343)
T ss_dssp             EEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEES-SBEEEE
T ss_pred             EEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeC-CeEEEE
Confidence            3333 345668999999999999999999999999999998876 55544  678999999999999999994 599999


Q ss_pred             eCCCCceEEEEecC--CCccE--EEEEEcCCCCEEEEEcC-CCeEEEEEccCCeeeeeccCCCCCeeEEEECC---CCcE
Q psy17610        322 ETCDGSIIRSLEGS--DVAAV--NCVDFVDDGKYFLTGGA-DQIVKMWMYREGVPCFVGIGHAASITKIKISP---DKKV  393 (515)
Q Consensus       322 d~~~~~~~~~~~~~--~~~~i--~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~---~~~~  393 (515)
                      |+++++.+..+...  +...+  .+++|+|+|++|++++. |+.+++|++.........    .++..++|.+   +.+.
T Consensus       241 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~  316 (343)
T 3lrv_A          241 DLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK----DEESALCLQSDTADFTD  316 (343)
T ss_dssp             ETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE----EEEEECCC----CCCCE
T ss_pred             EcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceEe----cCceeEecCccccccce
Confidence            99998776544321  11222  46999999999999888 999999999765443332    5677888988   8899


Q ss_pred             EEEEeCCCcEEEEeC
Q psy17610        394 IVSVSADGGIFLWTF  408 (515)
Q Consensus       394 l~~~~~dg~i~iw~~  408 (515)
                      +++++.|+.+.++-.
T Consensus       317 l~~~~~d~~~~~~~~  331 (343)
T 3lrv_A          317 MDVVCGDGGIAAILK  331 (343)
T ss_dssp             EEEEEETTEEEEEEE
T ss_pred             eEEEecCCceEEEEe
Confidence            999999999998753

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=100.00  E-value=1.8e-34  Score=268.58  Aligned_cols=345  Identities=12%  Similarity=0.075  Sum_probs=214.9

Q ss_pred             ecCCCcEEEEEEe---cCCCEEEEEecCceEEEEECCCCce-------eEE-eeccCccCeEEEEeCCCCcEEEEEecCC
Q psy17610         78 LKDDSGISSLQYN---PVNNKVFVGTVNCEIFLIDMNSGFT-------LTL-VNTCHTSAIYDLQFPVNFSSVFATCSKN  146 (515)
Q Consensus        78 ~~~~~~v~~~~~s---~~~~~l~~~~~d~~i~iw~~~~~~~-------~~~-~~~~h~~~v~~~~~~~~~~~l~~~~~d~  146 (515)
                      ++-+....++.|.   |++..+++++.++.|.+|+......       ... ....+..++..+.|++...         
T Consensus        12 lpl~~~p~~~~w~~~~~~~~~l~a~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------   82 (393)
T 4gq1_A           12 LPLNVRPYTTTWCSQSPSCSNLLAIGHDTGITIYCASEEQTPGSTGLTLQELFTIQTGLPTLHLSFSSSCS---------   82 (393)
T ss_dssp             CCTTCCEEEEEECTTSGGGTTEEEEEESSEEEEEEEEECCSSSCCSEEEEEEEEEECSSCEEEEEECTTCE---------
T ss_pred             ecCCCCCeEEEEeCCCCCCCCEEEEECCCCEEEEECCCCCcccccccceeeeEEEecCCCeeeEeecCCcc---------
Confidence            3445566677773   4444445555677899997643110       000 1111333444444443321         


Q ss_pred             cEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEE----ecCCCCCCeEEEEEcC---
Q psy17610        147 DIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFI----IPNAHNRGVTALAITQ---  219 (515)
Q Consensus       147 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~----~~~~~~~~v~~~~~~~---  219 (515)
                                   .....+........+.+++.+|++++.|++|++||.++++....    ...+|...|++++|+|   
T Consensus        83 -------------~~~~~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~  149 (393)
T 4gq1_A           83 -------------YSENLHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYS  149 (393)
T ss_dssp             -------------EECC----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEEC
T ss_pred             -------------ccccccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccc
Confidence                         11112333445566778888999999999999999998875432    2368999999999997   


Q ss_pred             -----CCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCC-EEEEEeCCCcEEEEEcccceEEEEEEc
Q psy17610        220 -----DGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSK-EAMSASTDGTCVLWDLIKSTRLIIMIL  293 (515)
Q Consensus       220 -----~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~  293 (515)
                           ++++|++++.|++|++||+..  ......+..|..++.+++|+|++. +|++++.|++|++||+++++.......
T Consensus       150 ~~~~~d~~~las~s~D~tv~~Wd~~~--~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~  227 (393)
T 4gq1_A          150 ADNRLAEQVIASVGDDCTLIIWRLTD--EGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQ  227 (393)
T ss_dssp             TTCSEEEEEEEEEETTSEEEEEEEET--TEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC-------
T ss_pred             cccCCCCCEEEEEECCCeEEEEECCC--CceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccc
Confidence                 789999999999999999953  344556677889999999999875 799999999999999998776544322


Q ss_pred             Cc-----cEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEc-CCCCEEEEEcCCCeEEEEEcc
Q psy17610        294 PS-----MIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFV-DDGKYFLTGGADQIVKMWMYR  367 (515)
Q Consensus       294 ~~-----~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~~~~~dg~i~i~d~~  367 (515)
                      ..     .+......+.                     ........+ ...+.++.|+ |+++.+++++.|+.+++||+.
T Consensus       228 ~~~~~~~~~~s~~~~~~---------------------~~~~~~~~~-~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~  285 (393)
T 4gq1_A          228 TELVKNPWLLTLNTLPL---------------------VNTCHSSGI-ASSLANVRWIGSDGSGILAMCKSGAWLRWNLF  285 (393)
T ss_dssp             ---CSCCCSEEEESGGG---------------------C------CC-SSSCSEEEEETTTTCEEEEECTTSEEEEEEC-
T ss_pred             cCCcccceEEecccccc---------------------eeeeecccc-cccceeeeeecCCCCEEEEEeCCCCEEEEECc
Confidence            11     0111111110                     011111222 3677888886 799999999999999999999


Q ss_pred             CCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEe
Q psy17610        368 EGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSA  447 (515)
Q Consensus       368 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  447 (515)
                      .++....+..|...+..+.+.|+.+.+.....                                            ....
T Consensus       286 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------------~~~~  321 (393)
T 4gq1_A          286 ANNDYNEISDSTMKLGPKNLLPNVQGISLFPS--------------------------------------------LLGA  321 (393)
T ss_dssp             ------------------CCSCSEEEECSSCC--------------------------------------------SSCC
T ss_pred             cCCCCceEeeecCccccEEEccccccccccCc--------------------------------------------ceeE
Confidence            98888888888888888888877543321110                                            1112


Q ss_pred             eecc--CCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEEEEEEe
Q psy17610        448 AYHP--SEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLYI  514 (515)
Q Consensus       448 ~~s~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~  514 (515)
                      .++|  ++.++++|+.||.|++||+.+++++..+..|+ .+|.+++|+|||++||++++|| +.+|++.
T Consensus       322 ~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~-~~V~svafspdG~~LA~as~~G-v~lvrL~  388 (393)
T 4gq1_A          322 CPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLG-MPIVDFCWHQDGSHLAIATEGS-VLLTRLM  388 (393)
T ss_dssp             EECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECS-SCEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred             EEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCC-CcEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence            2333  45577888999999999999999988888887 8999999999999999998777 6666653

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=100.00  E-value=7.7e-34  Score=267.89  Aligned_cols=311  Identities=17%  Similarity=0.246  Sum_probs=240.2

Q ss_pred             cccccccCcceeeeccceEEEEEecCCCcEEEEEEecCC----------CEEEEEec----CceEEEEECC---------
Q psy17610         55 TKLKDVNAEDVSLYSAGVTALYLLKDDSGISSLQYNPVN----------NKVFVGTV----NCEIFLIDMN---------  111 (515)
Q Consensus        55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~----------~~l~~~~~----d~~i~iw~~~---------  111 (515)
                      +.+++|.-....+|..    +....-.-+..++.|.|+.          .++++|+.    .+.|.++++.         
T Consensus        23 ~~~~~wk~n~~~~y~~----~~~~~l~wp~l~~~~~p~~~~~~~~~~~~~~~~~GT~t~~~~n~i~i~~~~lp~~~~~~~   98 (430)
T 2xyi_A           23 EEYKIWKKNTPFLYDL----VMTHALEWPSLTAQWLPDVTKQDGKDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFD   98 (430)
T ss_dssp             HHHHHHHHHHHHHEEE----EEEEECSSCCSCEEECSCCEECTTCSCEEEEEEEECCCSSSCEEEEEEEEEEC-------
T ss_pred             HHHhhHhhCChHHHHH----HhhcCCCCCceEEEECcccccccCCCcceEEEEEEEcCCCCCCEEEEEEEECCCCccccc
Confidence            4455665554444433    2222334456788888865          46777764    3567777542         


Q ss_pred             -----------------CCceeEEeeccCccCeEEEEeCCC-CcEEEEEecCCcEEEEeCCC----------CceeEEEE
Q psy17610        112 -----------------SGFTLTLVNTCHTSAIYDLQFPVN-FSSVFATCSKNDIRIWSVRT----------LNELLRIS  163 (515)
Q Consensus       112 -----------------~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~~~~~d~~i~iw~~~~----------~~~~~~~~  163 (515)
                                       +++.......+|.+.|++++|+|+ +..+++++.+|.|++|++.+          .+.+..+.
T Consensus        99 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~  178 (430)
T 2xyi_A           99 GSHYDNEKGEFGGFGSVCGKIEIEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLR  178 (430)
T ss_dssp             -------------------CEEEEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEE
T ss_pred             cccccccccccccccCCCCceEEEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEec
Confidence                             111222344569999999999997 56778888899999999987          67888899


Q ss_pred             ecCeEEEEEEEeeCCC-EEEEEeCCCeEEEEecCCCce-------EEEecCCCCCCeEEEEEcC-CCCEEEEecCCCcEE
Q psy17610        164 VMNMICACIVFTYDGK-AILSGWNDGFIRCFTPQSGKL-------KFIIPNAHNRGVTALAITQ-DGTRLLSGGGEGQVR  234 (515)
Q Consensus       164 ~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~~~~~~~~-------~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~  234 (515)
                      +|...+.+++|+|++. +|++++.||.|++|++.++..       ...+ ..|...|.+++|+| ++.+|++++.|+.|+
T Consensus       179 ~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~-~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~  257 (430)
T 2xyi_A          179 GHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIF-TGHTAVVEDVAWHLLHESLFGSVADDQKLM  257 (430)
T ss_dssp             CCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEE-CCCSSCEEEEEECSSCTTEEEEEETTSEEE
T ss_pred             CCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceee-cCCCCCEeeeEEeCCCCCEEEEEeCCCeEE
Confidence            9999999999999998 999999999999999987321       2333 58999999999999 788999999999999


Q ss_pred             EEEccCCc-eeeEEeeccccCceEEEEEecCCC-EEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEE
Q psy17610        235 IWKLTRES-QSLQCVLKEHTSSVSVIQIKSDSK-EAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITC  312 (515)
Q Consensus       235 iw~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  312 (515)
                      +||++... ......+..|...|.+++|+|++. .+++++.||.|++||+++..                          
T Consensus       258 i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~--------------------------  311 (430)
T 2xyi_A          258 IWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK--------------------------  311 (430)
T ss_dssp             EEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTT--------------------------
T ss_pred             EEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCC--------------------------
Confidence            99997542 244555668888899999998876 57788888888888876421                          


Q ss_pred             ECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCC-EEEEEcCCCeEEEEEccC--------------CeeeeeccC
Q psy17610        313 STNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGK-YFLTGGADQIVKMWMYRE--------------GVPCFVGIG  377 (515)
Q Consensus       313 ~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~i~d~~~--------------~~~~~~~~~  377 (515)
                                    .++..+..+. ..+.+++|+|+++ +|++++.||.|++||+..              .+.+....+
T Consensus       312 --------------~~~~~~~~h~-~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  376 (430)
T 2xyi_A          312 --------------LKLHSFESHK-DEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG  376 (430)
T ss_dssp             --------------SCSEEEECCS-SCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCC
T ss_pred             --------------CCeEEeecCC-CCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCC
Confidence                          2233444444 7899999999885 799999999999999987              356777889


Q ss_pred             CCCCeeEEEECCCCc-EEEEEeCCCcEEEEeCCCC
Q psy17610        378 HAASITKIKISPDKK-VIVSVSADGGIFLWTFPEL  411 (515)
Q Consensus       378 ~~~~i~~~~~~~~~~-~l~~~~~dg~i~iw~~~~~  411 (515)
                      |...|++++|+|+++ +|++++.||.|++|++...
T Consensus       377 h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~  411 (430)
T 2xyi_A          377 HTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN  411 (430)
T ss_dssp             CSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred             CCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence            999999999999999 9999999999999998753

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=100.00  E-value=4.8e-33  Score=241.80  Aligned_cols=281  Identities=9%  Similarity=0.045  Sum_probs=204.5

Q ss_pred             EEEEEEecCCC---EEEEEecCceEEEEECCCCc--eeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCce
Q psy17610         84 ISSLQYNPVNN---KVFVGTVNCEIFLIDMNSGF--TLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNE  158 (515)
Q Consensus        84 v~~~~~s~~~~---~l~~~~~d~~i~iw~~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~  158 (515)
                      +.++-|-..+-   .++++++. .|++|+..++.  +......+|+.+|..+.+.||...|++..-.+      +     
T Consensus        42 ~~~~~~~~~~~~~~~~~~~~~~-~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~------~-----  109 (356)
T 2w18_A           42 VSAMFWERAGCKEPCIITACED-VVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGN------L-----  109 (356)
T ss_dssp             EEEEEEC----CEEEEEEEESS-EEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECS------S-----
T ss_pred             EeeeeeccCCCCccEEEEeccc-eEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeecc------c-----
Confidence            55566655332   56666655 89999999863  55667788999999999999876665544311      1     


Q ss_pred             eEEEEecCeEEEEEEEeeC----CCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEE
Q psy17610        159 LLRISVMNMICACIVFTYD----GKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVR  234 (515)
Q Consensus       159 ~~~~~~~~~~v~~~~~~~~----~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~  234 (515)
                            +...|.+++++|+    ++.+++++.+  +.+|++.+++.+.....+|                     |+.|+
T Consensus       110 ------~~~~v~sla~spd~~~~~~~l~s~g~~--~~v~~l~~g~lv~ss~~g~---------------------d~~V~  160 (356)
T 2w18_A          110 ------EIREIRALFCSSDDESEKQVLLKSGNI--KAVLGLTKRRLVSSSGTLS---------------------DQQVE  160 (356)
T ss_dssp             ------SEEEEEEECC------CCEEEEEEEEE--EEEEEETTTEEEEEESSST---------------------TCEEE
T ss_pred             ------cccceEEEEECCCccccccEEEeCCCe--EEEEecCCCcEEEecccCC---------------------CCcEE
Confidence                  3457889999999    8999998744  7778665555444432334                     45555


Q ss_pred             EEEccCCceeeEEeeccccCceEEEEEec---CCCEEEEEeCCCcEEEEEcccceEEEEEEcC----ccEEEEEEcCCCc
Q psy17610        235 IWKLTRESQSLQCVLKEHTSSVSVIQIKS---DSKEAMSASTDGTCVLWDLIKSTRLIIMILP----SMIMSAAYHPSEV  307 (515)
Q Consensus       235 iw~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~----~~~~~~~~~~~~~  307 (515)
                      +|++.. .++....+.+|...+..++|++   ++..|++++.|++|++||+++++.+..+..+    ..+.+++|+|++.
T Consensus       161 ~~~~s~-dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~  239 (356)
T 2w18_A          161 VMTFAE-DGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGL  239 (356)
T ss_dssp             EEEECT-TSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTE
T ss_pred             EEEECC-CCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCC
Confidence            555531 2233345567888899999999   7899999999999999999999999988643    2567789999998


Q ss_pred             EE------------EEEECCCeEEEEeCCCCceEEEEe----cCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCee
Q psy17610        308 QL------------ITCSTNKMIDYWETCDGSIIRSLE----GSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVP  371 (515)
Q Consensus       308 ~l------------~~~~~~~~i~~~d~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~  371 (515)
                      ++            ++++.|+++++||..+++.+..+.    ..+...+.+..+  ++.++++++.|++|+|||+.+++.
T Consensus       240 ~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~  317 (356)
T 2w18_A          240 LFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQC  317 (356)
T ss_dssp             EEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSE
T ss_pred             EEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcE
Confidence            87            457789999999999998877653    122233333333  378899999999999999999999


Q ss_pred             eeeccCCCCCee-EEEECCCCcEEEEEeCCCcEEEEeC
Q psy17610        372 CFVGIGHAASIT-KIKISPDKKVIVSVSADGGIFLWTF  408 (515)
Q Consensus       372 ~~~~~~~~~~i~-~~~~~~~~~~l~~~~~dg~i~iw~~  408 (515)
                      +.++.+|...+. .++|+||+++|++|+.|++|++||+
T Consensus       318 l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~  355 (356)
T 2w18_A          318 TALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY  355 (356)
T ss_dssp             EEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred             EEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence            999999987655 6899999999999999999999985

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=100.00  E-value=2.7e-33  Score=243.39  Aligned_cols=283  Identities=10%  Similarity=0.035  Sum_probs=203.4

Q ss_pred             EEEEEEeeCCC---EEEEEeCCCeEEEEecCCC---ceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCc
Q psy17610        169 CACIVFTYDGK---AILSGWNDGFIRCFTPQSG---KLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRES  242 (515)
Q Consensus       169 v~~~~~~~~~~---~l~~~~~dg~i~~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~  242 (515)
                      +.++.|-..+-   .+++++ ...|++|+..++   +...+. ..|+.+|..+.+.||..-|+...-           + 
T Consensus        42 ~~~~~~~~~~~~~~~~~~~~-~~~v~lw~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~-----------~-  107 (356)
T 2w18_A           42 VSAMFWERAGCKEPCIITAC-EDVVSLWKALDAWQWEKLYTW-HFAEVPVLQIVPVPDVYNLVCVAL-----------G-  107 (356)
T ss_dssp             EEEEEEC----CEEEEEEEE-SSEEEEEEESSSSBEEEEEEE-ECCSSCEEEECCCTTCCSCEEEEE-----------C-
T ss_pred             EeeeeeccCCCCccEEEEec-cceEEEcccCCCccceeeEEE-eccCceeEEEEEcCcccceeeeee-----------c-
Confidence            45566644432   456665 457999999998   777777 689999999999997654443211           0 


Q ss_pred             eeeEEeeccccCceEEEEEecC----CCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEE--CCC
Q psy17610        243 QSLQCVLKEHTSSVSVIQIKSD----SKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCS--TNK  316 (515)
Q Consensus       243 ~~~~~~~~~~~~~v~~~~~~~~----~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~  316 (515)
                             .-+...|..++++|+    ++.+++++.+  +.+|++.                     +++.+.++.  .++
T Consensus       108 -------~~~~~~v~sla~spd~~~~~~~l~s~g~~--~~v~~l~---------------------~g~lv~ss~~g~d~  157 (356)
T 2w18_A          108 -------NLEIREIRALFCSSDDESEKQVLLKSGNI--KAVLGLT---------------------KRRLVSSSGTLSDQ  157 (356)
T ss_dssp             -------SSSEEEEEEECC------CCEEEEEEEEE--EEEEEET---------------------TTEEEEEESSSTTC
T ss_pred             -------cccccceEEEEECCCccccccEEEeCCCe--EEEEecC---------------------CCcEEEecccCCCC
Confidence                   114567889999999    8999998854  7778653                     344444433  488


Q ss_pred             eEEEEeC-CCCceEEEEecCCCccEEEEEEcC---CCCEEEEEcCCCeEEEEEccCCeeeeeccCCC---CCeeEEEECC
Q psy17610        317 MIDYWET-CDGSIIRSLEGSDVAAVNCVDFVD---DGKYFLTGGADQIVKMWMYREGVPCFVGIGHA---ASITKIKISP  389 (515)
Q Consensus       317 ~i~~~d~-~~~~~~~~~~~~~~~~i~~~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---~~i~~~~~~~  389 (515)
                      .|++|++ .+++.+..+..+. ..++.++|+|   ++.+|++++.|++|+|||+++++.+.++.+|.   ..+.+++|+|
T Consensus       158 ~V~~~~~s~dG~~~~s~~~~~-~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSp  236 (356)
T 2w18_A          158 QVEVMTFAEDGGGKENQFLMP-PEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSE  236 (356)
T ss_dssp             EEEEEEECTTSCEEEEEEECC-CSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEE
T ss_pred             cEEEEEECCCCceeeeeccCC-CceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECC
Confidence            9999998 4477777777765 7788889999   78999999999999999999999999997654   3677889999


Q ss_pred             CCcEE------------EEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEE
Q psy17610        390 DKKVI------------VSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLI  457 (515)
Q Consensus       390 ~~~~l------------~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~  457 (515)
                      +++++            ++|+.|+++++||..+........      ..         ...+|...+.+.  +.++.++|
T Consensus       237 dG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~------~~---------~p~Gh~~~~lsg--~~sg~~lA  299 (356)
T 2w18_A          237 MGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVML------YC---------LPPGQAGRFLEG--DVKDHCAA  299 (356)
T ss_dssp             TTEEEEEEC------------CCEEEEEEETTTTEEEEEEE------EC---------CCTTCCCCEEEE--EEETTEEE
T ss_pred             CCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEE------ee---------ccCCCcceeEcc--ccCCCEEE
Confidence            99987            567789999999987654210000      00         001222223333  33377899


Q ss_pred             EeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEEEEEE
Q psy17610        458 TCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLY  513 (515)
Q Consensus       458 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~  513 (515)
                      +++.|++|+|||+.+++++.++.+|+...+.+++|+|||++|++|+.|++|+|||+
T Consensus       300 SgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~  355 (356)
T 2w18_A          300 AILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY  355 (356)
T ss_dssp             EEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred             EEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence            99999999999999999999999987344556999999999999999999999997

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=100.00  E-value=5.1e-33  Score=262.29  Aligned_cols=246  Identities=15%  Similarity=0.238  Sum_probs=207.1

Q ss_pred             EeeccccCceEEEEEecC-CCEEEEEeCCCcEEEEEccc----------ceEEEEEE-cCccEEEEEEcCCCc-EEEEEE
Q psy17610        247 CVLKEHTSSVSVIQIKSD-SKEAMSASTDGTCVLWDLIK----------STRLIIMI-LPSMIMSAAYHPSEV-QLITCS  313 (515)
Q Consensus       247 ~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~----------~~~~~~~~-~~~~~~~~~~~~~~~-~l~~~~  313 (515)
                      .....|.+.|.+++|+|+ +.++++++.||.|++||+.+          ......+. +...+.+++|+|++. +|++++
T Consensus       122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~  201 (430)
T 2xyi_A          122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS  201 (430)
T ss_dssp             EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred             EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence            445679999999999997 67899999999999999986          44444444 455799999999988 999999


Q ss_pred             CCCeEEEEeCCCCce-------EEEEecCCCccEEEEEEcC-CCCEEEEEcCCCeEEEEEccCC---eeeeeccCCCCCe
Q psy17610        314 TNKMIDYWETCDGSI-------IRSLEGSDVAAVNCVDFVD-DGKYFLTGGADQIVKMWMYREG---VPCFVGIGHAASI  382 (515)
Q Consensus       314 ~~~~i~~~d~~~~~~-------~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~~i  382 (515)
                      .+|.|++||+..+..       ...+..+. ..+.+++|+| ++.+|++++.||.|++||++++   +.+..+..|...|
T Consensus       202 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~-~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v  280 (430)
T 2xyi_A          202 DDHTICLWDINATPKEHRVIDAKNIFTGHT-AVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEV  280 (430)
T ss_dssp             TTSCEEEEETTSCCBGGGEEECSEEECCCS-SCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCE
T ss_pred             CCCeEEEEeCCCCCCCCceeccceeecCCC-CCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCe
Confidence            999999999987422       34444444 8899999999 7889999999999999999987   5677778999999


Q ss_pred             eEEEECCCCc-EEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCc-EEEEee
Q psy17610        383 TKIKISPDKK-VIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEV-QLITCS  460 (515)
Q Consensus       383 ~~~~~~~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~  460 (515)
                      ++++|+|+++ +|++++.||.|++||++....                   ....+..|...|.+++|+|+++ +|++++
T Consensus       281 ~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~-------------------~~~~~~~h~~~v~~i~~sp~~~~~l~s~~  341 (430)
T 2xyi_A          281 NCLSFNPYSEFILATGSADKTVALWDLRNLKL-------------------KLHSFESHKDEIFQVQWSPHNETILASSG  341 (430)
T ss_dssp             EEEEECSSCTTEEEEEETTSEEEEEETTCTTS-------------------CSEEEECCSSCEEEEEECSSCTTEEEEEE
T ss_pred             EEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCC-------------------CeEEeecCCCCEEEEEECCCCCCEEEEEe
Confidence            9999999887 789999999999999976421                   1122334677899999999995 699999


Q ss_pred             cCCeEEEEecCC--------------CeeeeeecccccceEEEEEEcCCCc-EEEEeecCCeEEEEEE
Q psy17610        461 TNKMIDYWETCD--------------GSIIRSLEGSDVAAVNCVDFVDDGK-YFLTGGADQIVKICLY  513 (515)
Q Consensus       461 ~dg~v~iwd~~~--------------~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~v~iw~~  513 (515)
                      .||.|++||+..              .+++..+.+|. ..|.+++|+|+++ +|++++.||.|++|++
T Consensus       342 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~  408 (430)
T 2xyi_A          342 TDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT-AKISDFSWNPNEPWIICSVSEDNIMQVWQM  408 (430)
T ss_dssp             TTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCS-SCEEEEEECSSSTTEEEEEETTSEEEEEEE
T ss_pred             CCCcEEEEeCCCCccccCccccccCCcceEEEcCCCC-CCceEEEECCCCCCEEEEEECCCCEEEeEc
Confidence            999999999987              35667777776 8899999999999 8999999999999996

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=100.00  E-value=1.6e-32  Score=264.13  Aligned_cols=336  Identities=9%  Similarity=0.038  Sum_probs=261.7

Q ss_pred             EeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEec--CCCceEEEecCCC
Q psy17610        131 QFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTP--QSGKLKFIIPNAH  208 (515)
Q Consensus       131 ~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~--~~~~~~~~~~~~~  208 (515)
                      +|+|++..+++.+.+++|.+||..+++.+.++..+.. +..++|+|+|++|++++.++.|.+||+  .+++.+..+.  +
T Consensus       144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~--~  220 (543)
T 1nir_A          144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK--I  220 (543)
T ss_dssp             CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE--C
T ss_pred             ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe--c
Confidence            4889987788878899999999999999999884443 789999999999999999999999999  8888888874  4


Q ss_pred             CCCeEEEEEcC----CCCEEEEecC-CCcEEEEEccCCceeeEEeecc----------ccC-ceEEEEEecCCCE-EEEE
Q psy17610        209 NRGVTALAITQ----DGTRLLSGGG-EGQVRIWKLTRESQSLQCVLKE----------HTS-SVSVIQIKSDSKE-AMSA  271 (515)
Q Consensus       209 ~~~v~~~~~~~----~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~~----------~~~-~v~~~~~~~~~~~-l~~~  271 (515)
                      ...+..++|+|    +|+++++++. +++|.+||..+  .+....+..          |.. .+..+.++|++.. +++.
T Consensus       221 g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t--~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~  298 (543)
T 1nir_A          221 GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGET--LEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNV  298 (543)
T ss_dssp             CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTT--CCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEE
T ss_pred             CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccc--cccceeecccCcccCccccccCCceEEEEECCCCCEEEEEE
Confidence            55689999999    9999998884 89999999854  444444432          223 6889999997765 4566


Q ss_pred             eCCCcEEEEEcccceEEE--EEEcCccEEEEEEcCCCcEEEEEE-CCCeEEEEeCCCCceEEEEecC---CCccEEEEEE
Q psy17610        272 STDGTCVLWDLIKSTRLI--IMILPSMIMSAAYHPSEVQLITCS-TNKMIDYWETCDGSIIRSLEGS---DVAAVNCVDF  345 (515)
Q Consensus       272 ~~d~~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~-~~~~i~~~d~~~~~~~~~~~~~---~~~~i~~~~~  345 (515)
                      ..++.|.+||+.+.+.+.  .+.....+..++|+|+++++++++ .++.|.+||+.+++++..+...   +.+....+ +
T Consensus       299 ~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~  377 (543)
T 1nir_A          299 KETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-V  377 (543)
T ss_dssp             TTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-E
T ss_pred             CCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-C
Confidence            678999999998755333  455556788899999999887665 4889999999999999888752   21222233 4


Q ss_pred             cCC-CCEEEEEc-CCCeEEEEEccC-------CeeeeeccCCCCCeeEEEECCCCcEEEEEe-------CCCcEEEEeCC
Q psy17610        346 VDD-GKYFLTGG-ADQIVKMWMYRE-------GVPCFVGIGHAASITKIKISPDKKVIVSVS-------ADGGIFLWTFP  409 (515)
Q Consensus       346 ~~~-~~~l~~~~-~dg~i~i~d~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-------~dg~i~iw~~~  409 (515)
                      +|+ +.+++++. .|++|.+||+.+       .+.+.++..|...+..++++|++++|++++       .+++|.+||+.
T Consensus       378 ~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~  457 (543)
T 1nir_A          378 HPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLK  457 (543)
T ss_dssp             ETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETT
T ss_pred             CCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECC
Confidence            676 66677765 579999999988       889999999998899999999999999987       26799999998


Q ss_pred             CCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEee-----cCCeEEEEecCCCeeeeeecccc
Q psy17610        410 ELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCS-----TNKMIDYWETCDGSIIRSLEGSD  483 (515)
Q Consensus       410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-----~dg~v~iwd~~~~~~~~~~~~~~  483 (515)
                      +.+.....       ...    ....-+..+...+..+.|+|+|+.++++.     .++.|.|||.++++++++++.+.
T Consensus       458 ~~~~~~~~-------~~v----~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~~~  525 (543)
T 1nir_A          458 NLDAKYQV-------LPI----AEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDPR  525 (543)
T ss_dssp             CTTSCCEE-------ECH----HHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECCTT
T ss_pred             CCCCCeEE-------eec----hhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEeecCCC
Confidence            76521000       000    00000112345689999999999988763     47999999999999999998653

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=100.00  E-value=8.8e-32  Score=258.95  Aligned_cols=319  Identities=10%  Similarity=0.035  Sum_probs=255.6

Q ss_pred             EEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeC--CCCceeEEEEec
Q psy17610         88 QYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSV--RTLNELLRISVM  165 (515)
Q Consensus        88 ~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~--~~~~~~~~~~~~  165 (515)
                      +|+|++.++++++.+++|.+||..+++.+..+..++.  +..++|+|||++|++++.|++|.+||+  .+++.+.++.. 
T Consensus       144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-  220 (543)
T 1nir_A          144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-  220 (543)
T ss_dssp             CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-
T ss_pred             ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-
Confidence            4899999999999999999999999766555543444  889999999999999999999999999  88888888874 


Q ss_pred             CeEEEEEEEee----CCCEEEEEeC-CCeEEEEecCCCceEEEecCC---------CC-CCeEEEEEcCCCCE-EEEecC
Q psy17610        166 NMICACIVFTY----DGKAILSGWN-DGFIRCFTPQSGKLKFIIPNA---------HN-RGVTALAITQDGTR-LLSGGG  229 (515)
Q Consensus       166 ~~~v~~~~~~~----~~~~l~~~~~-dg~i~~~~~~~~~~~~~~~~~---------~~-~~v~~~~~~~~~~~-l~~~~~  229 (515)
                      ...+..++|+|    +|+++++++. ++.|.+||..+++++..+...         |. ..+..+.++|++.. +++...
T Consensus       221 g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~  300 (543)
T 1nir_A          221 GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE  300 (543)
T ss_dssp             CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred             CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC
Confidence            44568999999    9999998884 899999999999988877421         22 37899999997654 556778


Q ss_pred             CCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEe-CCCcEEEEEcccceEEEEEEcC-----ccEEEEEEc
Q psy17610        230 EGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAS-TDGTCVLWDLIKSTRLIIMILP-----SMIMSAAYH  303 (515)
Q Consensus       230 d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~-----~~~~~~~~~  303 (515)
                      ++.|.+||+..........+ .+...+..+.|+|+++++++++ .+++|.+||..+++....+...     .....+ ++
T Consensus       301 ~g~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~  378 (543)
T 1nir_A          301 TGKVLLVNYKDIDNLTVTSI-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VH  378 (543)
T ss_dssp             TTEEEEEECTTSSSCEEEEE-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EE
T ss_pred             CCeEEEEEecCCCcceeEEe-ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CC
Confidence            89999999965433222233 3566788899999999877665 5889999999999988877642     222222 47


Q ss_pred             CC-CcEEEEEE-CCCeEEEEeCCC-------CceEEEEecCCCccEEEEEEcCCCCEEEEEc-------CCCeEEEEEcc
Q psy17610        304 PS-EVQLITCS-TNKMIDYWETCD-------GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGG-------ADQIVKMWMYR  367 (515)
Q Consensus       304 ~~-~~~l~~~~-~~~~i~~~d~~~-------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-------~dg~i~i~d~~  367 (515)
                      |+ +..++++. .+++|.+||+.+       .+.++++..+. ..+..++++|++++|++++       .+++|.+||+.
T Consensus       379 p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g-~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~  457 (543)
T 1nir_A          379 PKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQG-GGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLK  457 (543)
T ss_dssp             TTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSC-SCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETT
T ss_pred             CCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCC-CCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECC
Confidence            77 55555554 579999999998       89999999876 5677899999999999987       26799999999


Q ss_pred             CCeee-eec--------cCCCCCeeEEEECCCCcEEEEEe-----CCCcEEEEeCCCCc
Q psy17610        368 EGVPC-FVG--------IGHAASITKIKISPDKKVIVSVS-----ADGGIFLWTFPELE  412 (515)
Q Consensus       368 ~~~~~-~~~--------~~~~~~i~~~~~~~~~~~l~~~~-----~dg~i~iw~~~~~~  412 (515)
                      +++.. ..+        ..+...+..++|+|+|+.|+++.     .|+.|.+||..+.+
T Consensus       458 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~  516 (543)
T 1nir_A          458 NLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLK  516 (543)
T ss_dssp             CTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred             CCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCce
Confidence            88766 332        35678899999999999998763     47999999998765

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=100.00  E-value=1.8e-33  Score=261.79  Aligned_cols=263  Identities=12%  Similarity=0.059  Sum_probs=187.2

Q ss_pred             EecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeE----EeeccCccCeEEEEeCC--------CCcEEEEEec
Q psy17610         77 LLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLT----LVNTCHTSAIYDLQFPV--------NFSSVFATCS  144 (515)
Q Consensus        77 ~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~----~~~~~h~~~v~~~~~~~--------~~~~l~~~~~  144 (515)
                      ...|...+....+++++.+||+|+.|++|++||.+++....    ..+.+|.+.|.+++|+|        |++.|++++.
T Consensus        85 ~~~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~  164 (393)
T 4gq1_A           85 ENLHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGD  164 (393)
T ss_dssp             CC----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEET
T ss_pred             ccccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEEC
Confidence            34566667777778889999999999999999998864432    34678999999999998        7889999999


Q ss_pred             CCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCC-EEEEEeCCCeEEEEecCCCceEEEe-------------------
Q psy17610        145 KNDIRIWSVRTLNELLRISVMNMICACIVFTYDGK-AILSGWNDGFIRCFTPQSGKLKFII-------------------  204 (515)
Q Consensus       145 d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~~~~~~~~~~~~-------------------  204 (515)
                      |++|+|||+.++.++..+..|..++.+++|+|++. +|++++.|+.|++||+.+++.....                   
T Consensus       165 D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~  244 (393)
T 4gq1_A          165 DCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPL  244 (393)
T ss_dssp             TSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGG
T ss_pred             CCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccc
Confidence            99999999999988888999999999999999874 7999999999999999887653322                   


Q ss_pred             -----cCCCCCCeEEEEEc-CCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEE
Q psy17610        205 -----PNAHNRGVTALAIT-QDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCV  278 (515)
Q Consensus       205 -----~~~~~~~v~~~~~~-~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~  278 (515)
                           ..+|...+.++.|. ++++.+++++.|+.+++||+..  ......+..|...+..+.+.|+.+.+...       
T Consensus       245 ~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-------  315 (393)
T 4gq1_A          245 VNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFA--NNDYNEISDSTMKLGPKNLLPNVQGISLF-------  315 (393)
T ss_dssp             C------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC---------------------CCSCSEEEECSS-------
T ss_pred             eeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECcc--CCCCceEeeecCccccEEEcccccccccc-------
Confidence                 13577788899987 6999999999999999999953  34444556677667666666654322111       


Q ss_pred             EEEcccceEEEEEEcCccEEEEEEcC--CCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEc
Q psy17610        279 LWDLIKSTRLIIMILPSMIMSAAYHP--SEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGG  356 (515)
Q Consensus       279 iwd~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~  356 (515)
                                      .......++|  ++.++++++.|+.|++||..+++....+..+. .+|.+++|+|||++||+++
T Consensus       316 ----------------~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~-~~V~svafspdG~~LA~as  378 (393)
T 4gq1_A          316 ----------------PSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLG-MPIVDFCWHQDGSHLAIAT  378 (393)
T ss_dssp             ----------------CCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECS-SCEEEEEECTTSSEEEEEE
T ss_pred             ----------------CcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCC-CcEEEEEEcCCCCEEEEEe
Confidence                            1111122333  34456677889999999999999888887776 7999999999999999998


Q ss_pred             CCCeEEEEEc
Q psy17610        357 ADQIVKMWMY  366 (515)
Q Consensus       357 ~dg~i~i~d~  366 (515)
                      .+| +.+|.+
T Consensus       379 ~~G-v~lvrL  387 (393)
T 4gq1_A          379 EGS-VLLTRL  387 (393)
T ss_dssp             SSE-EEEEEE
T ss_pred             CCC-eEEEEE
Confidence            766 556654

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=100.00  E-value=2.8e-31  Score=248.27  Aligned_cols=301  Identities=12%  Similarity=0.079  Sum_probs=240.4

Q ss_pred             CcEEEEEEecCCC-EEEEEe----cCc----eEEEEEC--CCCcee-EEeeccCccCeEEEEeCC--------------C
Q psy17610         82 SGISSLQYNPVNN-KVFVGT----VNC----EIFLIDM--NSGFTL-TLVNTCHTSAIYDLQFPV--------------N  135 (515)
Q Consensus        82 ~~v~~~~~s~~~~-~l~~~~----~d~----~i~iw~~--~~~~~~-~~~~~~h~~~v~~~~~~~--------------~  135 (515)
                      ..+...+|++.|. ++++|+    .+|    .|++||+  .+++.+ ...+.+|...+..+++++              .
T Consensus        63 ~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~  142 (415)
T 2hqs_A           63 QEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAF  142 (415)
T ss_dssp             GGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCT
T ss_pred             cCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcC
Confidence            4677888888775 565776    457    8999999  887654 245677888888887764              2


Q ss_pred             CcEEEEEecC------CcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCC---eEEEEecCCCceEEEecC
Q psy17610        136 FSSVFATCSK------NDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDG---FIRCFTPQSGKLKFIIPN  206 (515)
Q Consensus       136 ~~~l~~~~~d------~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---~i~~~~~~~~~~~~~~~~  206 (515)
                      +..++.++.+      +.|++||++ +.....+..|...+.+++|+|+|++|++++.++   .|++||+.+++....  .
T Consensus       143 ~~~l~~~s~~~~~~~~~~i~i~d~~-g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l--~  219 (415)
T 2hqs_A          143 RTRIAYVVQTNGGQFPYELRVSDYD-GYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQV--A  219 (415)
T ss_dssp             TCEEEEEEECSSSSCCEEEEEEETT-SCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEE--E
T ss_pred             CCEEEEEEecCCCCccceEEEEcCC-CCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEe--e
Confidence            5677777664      799999997 456778888999999999999999999999875   999999999987643  4


Q ss_pred             CCCCCeEEEEEcCCCCEEE-EecCCCc--EEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCC-C--cEEEE
Q psy17610        207 AHNRGVTALAITQDGTRLL-SGGGEGQ--VRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTD-G--TCVLW  280 (515)
Q Consensus       207 ~~~~~v~~~~~~~~~~~l~-~~~~d~~--i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~--~i~iw  280 (515)
                      .|...+.+++|+|+|+.|+ +++.++.  |++||+....  . ..+..|...+..++|+||+++|++++.+ +  .|.+|
T Consensus       220 ~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~--~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~  296 (415)
T 2hqs_A          220 SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ--I-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKV  296 (415)
T ss_dssp             CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC--E-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEE
T ss_pred             cCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCC--E-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEE
Confidence            6778899999999999888 6666554  8999985432  2 4566788899999999999999988864 4  68888


Q ss_pred             EcccceEEEEEEcCccEEEEEEcCCCcEEEEEECC---CeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcC
Q psy17610        281 DLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTN---KMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA  357 (515)
Q Consensus       281 d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~  357 (515)
                      |+.+++..........+..++|+|++++|++++.+   ..|++||+.+++.. .+..+  ..+.+++|+|+|++|++++.
T Consensus       297 d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~--~~~~~~~~spdg~~l~~~s~  373 (415)
T 2hqs_A          297 NINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSST--FLDETPSLAPNGTMVIYSSS  373 (415)
T ss_dssp             ETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCS--SSCEEEEECTTSSEEEEEEE
T ss_pred             ECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-EecCC--CCcCCeEEcCCCCEEEEEEc
Confidence            98887754444445678899999999999988764   68999999988763 34433  37889999999999998887


Q ss_pred             CC---eEEEEEccCCeeeeeccCCCCCeeEEEECCCCc
Q psy17610        358 DQ---IVKMWMYREGVPCFVGIGHAASITKIKISPDKK  392 (515)
Q Consensus       358 dg---~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~  392 (515)
                      ++   .|++||+. +.....+..|.+.|.+++|+|...
T Consensus       374 ~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~~~~  410 (415)
T 2hqs_A          374 QGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSPYLH  410 (415)
T ss_dssp             ETTEEEEEEEETT-SCCEEECCCSSSEEEEEEECCCCC
T ss_pred             CCCccEEEEEECC-CCcEEEeeCCCCCCcCCccccccc
Confidence            76   79999986 556778889999999999999643

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=100.00  E-value=2e-30  Score=262.72  Aligned_cols=322  Identities=10%  Similarity=0.068  Sum_probs=244.5

Q ss_pred             CCcEEEEEEecCCCEEEEEec-Cc-----eEEEEECCCCceeEEeeccCc------------------------cCeEEE
Q psy17610         81 DSGISSLQYNPVNNKVFVGTV-NC-----EIFLIDMNSGFTLTLVNTCHT------------------------SAIYDL  130 (515)
Q Consensus        81 ~~~v~~~~~s~~~~~l~~~~~-d~-----~i~iw~~~~~~~~~~~~~~h~------------------------~~v~~~  130 (515)
                      ...+.+++|||||++|++++. |+     .|++||+.+++... ....+.                        ..|.++
T Consensus        36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  114 (741)
T 2ecf_A           36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRL-LVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDY  114 (741)
T ss_dssp             CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEE-EECGGGTC--------------------CCEESCCC
T ss_pred             CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeE-ccchhhcccccccccchhhhhhhhhhhccccCccee
Confidence            567999999999999999998 88     89999999875443 333333                        238899


Q ss_pred             EeCCCCcEEEEEecCCcEEEEeCCCCc--eeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCC
Q psy17610        131 QFPVNFSSVFATCSKNDIRIWSVRTLN--ELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAH  208 (515)
Q Consensus       131 ~~~~~~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~  208 (515)
                      +|+|||++|++++. +.|.+||+.+++  ....+..+...+..++|+|||++|+.++ ++.|++||+.+++..... ..+
T Consensus       115 ~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~-~~~  191 (741)
T 2ecf_A          115 QWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLT-ADG  191 (741)
T ss_dssp             EECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECC-CCC
T ss_pred             EECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEec-cCC
Confidence            99999999998886 999999999873  4555666778899999999999999887 468999999998776544 333


Q ss_pred             CCC----------------eEEEEEcCCCCEEEEecCCC---------------------------------cEEEEEcc
Q psy17610        209 NRG----------------VTALAITQDGTRLLSGGGEG---------------------------------QVRIWKLT  239 (515)
Q Consensus       209 ~~~----------------v~~~~~~~~~~~l~~~~~d~---------------------------------~i~iw~~~  239 (515)
                      ...                +..++|+|||++|++++.|+                                 .|.+||+.
T Consensus       192 ~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~  271 (741)
T 2ecf_A          192 STTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPA  271 (741)
T ss_dssp             CSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSS
T ss_pred             ccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECC
Confidence            332                47799999999999987665                                 78888886


Q ss_pred             C-CceeeEEeeccccCceEEEEEecCCCEEEEEeC-----CCcEEEEEcccceEEEEEEcCc-----cEEEEEEcCCCcE
Q psy17610        240 R-ESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST-----DGTCVLWDLIKSTRLIIMILPS-----MIMSAAYHPSEVQ  308 (515)
Q Consensus       240 ~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----d~~i~iwd~~~~~~~~~~~~~~-----~~~~~~~~~~~~~  308 (515)
                      . ...........|...+..++| |||++|++++.     +..|++||+.+++....+....     .+..++|+|+++.
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~  350 (741)
T 2ecf_A          272 EQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSI  350 (741)
T ss_dssp             TTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCE
T ss_pred             CCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeE
Confidence            4 332222111247788999999 99999987764     5679999999988776665433     3457899999998


Q ss_pred             EEEEECCCeEEEEeCC-CCceEEEEecCCCccEEEE-EEcCCCCEEEE-EcCCC--eEEEEEccC-CeeeeeccCCCCCe
Q psy17610        309 LITCSTNKMIDYWETC-DGSIIRSLEGSDVAAVNCV-DFVDDGKYFLT-GGADQ--IVKMWMYRE-GVPCFVGIGHAASI  382 (515)
Q Consensus       309 l~~~~~~~~i~~~d~~-~~~~~~~~~~~~~~~i~~~-~~~~~~~~l~~-~~~dg--~i~i~d~~~-~~~~~~~~~~~~~i  382 (515)
                      ++++..++..++|... .++ ...+..+. ..+..+ .|+|+|+.++. ++.++  .+++|++.. +.....+.. ...+
T Consensus       351 ~~~~~~~g~~~l~~~~~~~~-~~~l~~~~-~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~-~~~~  427 (741)
T 2ecf_A          351 LWSSERTGFQHLYRIDSKGK-AAALTHGN-WSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSK-APGM  427 (741)
T ss_dssp             EEEECTTSSCEEEEECSSSC-EEESCCSS-SCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCC-SCSE
T ss_pred             EEEecCCCccEEEEEcCCCC-eeeeeecc-eEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeeccc-CCCc
Confidence            8888888877777654 344 55665554 667776 59999987754 45555  899999864 554555554 6678


Q ss_pred             eEEEECCCCcEEEEEeCC----CcEEEEeCCC
Q psy17610        383 TKIKISPDKKVIVSVSAD----GGIFLWTFPE  410 (515)
Q Consensus       383 ~~~~~~~~~~~l~~~~~d----g~i~iw~~~~  410 (515)
                      ..++|+||+++|+....+    ..+.+|+...
T Consensus       428 ~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~  459 (741)
T 2ecf_A          428 HSASFARNASVYVDSWSNNSTPPQIELFRANG  459 (741)
T ss_dssp             EEEEECTTSSEEEEEEEETTEEEEEEEEETTS
T ss_pred             eEEEECCCCCEEEEEecCCCCCCeEEEEEcCC
Confidence            899999999988876543    4688888754

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.97  E-value=8.6e-30  Score=238.16  Aligned_cols=302  Identities=12%  Similarity=0.030  Sum_probs=231.8

Q ss_pred             CccCeEEEEeCCCCcEEE-EEe----cCC----cEEEEeC--CCCcee--EEEEecCeEEEEEEEee-------------
Q psy17610        123 HTSAIYDLQFPVNFSSVF-ATC----SKN----DIRIWSV--RTLNEL--LRISVMNMICACIVFTY-------------  176 (515)
Q Consensus       123 h~~~v~~~~~~~~~~~l~-~~~----~d~----~i~iw~~--~~~~~~--~~~~~~~~~v~~~~~~~-------------  176 (515)
                      +...+....|.+.+..++ +++    .+|    .+++||+  .+++++  ..+.+|...+..+++++             
T Consensus        61 ~~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~  140 (415)
T 2hqs_A           61 SAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKG  140 (415)
T ss_dssp             SGGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCC
T ss_pred             cccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCC
Confidence            335677888988886555 554    367    8999999  898877  45778877777666664             


Q ss_pred             -CCCEEEEEeCC------CeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCC---cEEEEEccCCceeeE
Q psy17610        177 -DGKAILSGWND------GFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEG---QVRIWKLTRESQSLQ  246 (515)
Q Consensus       177 -~~~~l~~~~~d------g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---~i~iw~~~~~~~~~~  246 (515)
                       .+..++.++.+      +.|++||++.+.. ..+ ..|...+.+++|+|+|+.|++++.++   .|++||+.+...   
T Consensus       141 ~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~-~~l-~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~---  215 (415)
T 2hqs_A          141 AFRTRIAYVVQTNGGQFPYELRVSDYDGYNQ-FVV-HRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV---  215 (415)
T ss_dssp             CTTCEEEEEEECSSSSCCEEEEEEETTSCSC-EEE-EEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE---
T ss_pred             cCCCEEEEEEecCCCCccceEEEEcCCCCCC-EEE-eCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcE---
Confidence             15667766654      7999999986554 344 46889999999999999999998875   999999964432   


Q ss_pred             EeeccccCceEEEEEecCCCEEE-EEeCCCc--EEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECC-C--eEEE
Q psy17610        247 CVLKEHTSSVSVIQIKSDSKEAM-SASTDGT--CVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTN-K--MIDY  320 (515)
Q Consensus       247 ~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~--~i~~  320 (515)
                      ..+..|...+.+++|+|||+.|+ +++.++.  |++||+.+++......+...+.+++|+|+++.|++++.+ +  .|++
T Consensus       216 ~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~  295 (415)
T 2hqs_A          216 RQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYK  295 (415)
T ss_dssp             EEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEE
T ss_pred             EEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEE
Confidence            24566788899999999999888 5665554  999999988775555556689999999999999988864 4  7888


Q ss_pred             EeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCC---CeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEE
Q psy17610        321 WETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGAD---QIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSV  397 (515)
Q Consensus       321 ~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~  397 (515)
                      ||+.+++.. .+..+. ..+.+++|+|+|++|++++.+   ..|++||+.+++.. .+..+. .+.+++|+|++++|+++
T Consensus       296 ~d~~~~~~~-~l~~~~-~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~spdg~~l~~~  371 (415)
T 2hqs_A          296 VNINGGAPQ-RITWEG-SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTF-LDETPSLAPNGTMVIYS  371 (415)
T ss_dssp             EETTSSCCE-ECCCSS-SEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCSS-SCEEEEECTTSSEEEEE
T ss_pred             EECCCCCEE-EEecCC-CcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-EecCCC-CcCCeEEcCCCCEEEEE
Confidence            899887643 333333 678899999999999988764   58999999988764 455554 89999999999999998


Q ss_pred             eCCC---cEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCc
Q psy17610        398 SADG---GIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEV  454 (515)
Q Consensus       398 ~~dg---~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~  454 (515)
                      +.++   .|.+||+....                     ...+..+...|.+++|+|...
T Consensus       372 s~~~~~~~l~~~d~~g~~---------------------~~~l~~~~~~v~~~~~~~~~~  410 (415)
T 2hqs_A          372 SSQGMGSVLNLVSTDGRF---------------------KARLPATDGQVKFPAWSPYLH  410 (415)
T ss_dssp             EEETTEEEEEEEETTSCC---------------------EEECCCSSSEEEEEEECCCCC
T ss_pred             EcCCCccEEEEEECCCCc---------------------EEEeeCCCCCCcCCccccccc
Confidence            8877   79999986432                     122334567799999999754

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.97  E-value=1.5e-29  Score=256.39  Aligned_cols=322  Identities=9%  Similarity=0.053  Sum_probs=243.3

Q ss_pred             ccCeEEEEeCCCCcEEEEEec-CC-----cEEEEeCCCCceeEEEEecC------------------------eEEEEEE
Q psy17610        124 TSAIYDLQFPVNFSSVFATCS-KN-----DIRIWSVRTLNELLRISVMN------------------------MICACIV  173 (515)
Q Consensus       124 ~~~v~~~~~~~~~~~l~~~~~-d~-----~i~iw~~~~~~~~~~~~~~~------------------------~~v~~~~  173 (515)
                      ...+.+++|+|||++|++++. |+     .|.+||+.+++....+..+.                        ..+.+++
T Consensus        36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  115 (741)
T 2ecf_A           36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ  115 (741)
T ss_dssp             CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred             CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence            456999999999999999998 88     89999999988766665432                        3478899


Q ss_pred             EeeCCCEEEEEeCCCeEEEEecCCC---ceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeec
Q psy17610        174 FTYDGKAILSGWNDGFIRCFTPQSG---KLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLK  250 (515)
Q Consensus       174 ~~~~~~~l~~~~~dg~i~~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~  250 (515)
                      |+|||++|++++. +.|.+||+.++   +.. .+ ..|...+..++|+|||++|+.++. +.|++||+...  .......
T Consensus       116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~-~l-~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g--~~~~~~~  189 (741)
T 2ecf_A          116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVR-QL-THGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASG--RQMQLTA  189 (741)
T ss_dssp             ECTTSSEEEEEET-TEEEEEESSSCSTTSCC-BC-CCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTT--EEEECCC
T ss_pred             ECCCCCEEEEEeC-CcEEEEECCCCCcceEE-Ec-ccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCC--CEEEecc
Confidence            9999999999886 89999999988   443 33 467788999999999999998874 68999999643  2332223


Q ss_pred             cccCc----------------eEEEEEecCCCEEEEEeCCC---------------------------------cEEEEE
Q psy17610        251 EHTSS----------------VSVIQIKSDSKEAMSASTDG---------------------------------TCVLWD  281 (515)
Q Consensus       251 ~~~~~----------------v~~~~~~~~~~~l~~~~~d~---------------------------------~i~iwd  281 (515)
                      .+...                +..+.|+|||++|++++.|+                                 .|.+||
T Consensus       190 ~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d  269 (741)
T 2ecf_A          190 DGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVIS  269 (741)
T ss_dssp             CCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEEC
T ss_pred             CCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEE
Confidence            23221                47799999999999988765                                 789999


Q ss_pred             ccc-ceEEEEEE---cCccEEEEEEcCCCcEEEEEEC-----CCeEEEEeCCCCceEEEEecCCCc---cEEEEEEcCCC
Q psy17610        282 LIK-STRLIIMI---LPSMIMSAAYHPSEVQLITCST-----NKMIDYWETCDGSIIRSLEGSDVA---AVNCVDFVDDG  349 (515)
Q Consensus       282 ~~~-~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~-----~~~i~~~d~~~~~~~~~~~~~~~~---~i~~~~~~~~~  349 (515)
                      +.+ ++......   ....+..++| ||++.|+++..     +..|++||+.+++....+..+...   .+..++|+|||
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg  348 (741)
T 2ecf_A          270 PAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDG  348 (741)
T ss_dssp             SSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTS
T ss_pred             CCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCC
Confidence            988 76554432   3356899999 99999987764     568999999999887766654322   34688999999


Q ss_pred             CEEEEEcCCCeEEEEEcc-CCeeeeeccCCCCCeeEE-EECCCCcEEEEE-eCCC--cEEEEeCCCCcCccCCCccccee
Q psy17610        350 KYFLTGGADQIVKMWMYR-EGVPCFVGIGHAASITKI-KISPDKKVIVSV-SADG--GIFLWTFPELEDDVGDSRSLSSK  424 (515)
Q Consensus       350 ~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~i~~~-~~~~~~~~l~~~-~~dg--~i~iw~~~~~~~~~~~~~~~~~~  424 (515)
                      +++++++.+|.++||.+. .+. ...+..|...+..+ .|+|+++.|+.. +.++  .+++|++......   ...    
T Consensus       349 ~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~---~~~----  420 (741)
T 2ecf_A          349 SILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQ---PQR----  420 (741)
T ss_dssp             CEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCC---CEE----
T ss_pred             eEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCC---eee----
Confidence            999999999988888765 344 77777888888887 599999877654 4455  8999987532110   000    


Q ss_pred             eecccccccceeeecCcccEEEeeeccCCcEEEEeecC----CeEEEEecCCC
Q psy17610        425 ISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTN----KMIDYWETCDG  473 (515)
Q Consensus       425 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d----g~v~iwd~~~~  473 (515)
                                  +. ....+..++|+|||++|+....+    +.+++|+...+
T Consensus       421 ------------l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~  460 (741)
T 2ecf_A          421 ------------LS-KAPGMHSASFARNASVYVDSWSNNSTPPQIELFRANGE  460 (741)
T ss_dssp             ------------CC-CSCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETTSC
T ss_pred             ------------cc-cCCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcCCC
Confidence                        00 12346789999999988876544    56889987543

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.97  E-value=7.7e-30  Score=257.76  Aligned_cols=363  Identities=12%  Similarity=0.061  Sum_probs=252.2

Q ss_pred             CcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCcc---CeEEEEeCCCCcEEEEEecC---------CcEE
Q psy17610         82 SGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTS---AIYDLQFPVNFSSVFATCSK---------NDIR  149 (515)
Q Consensus        82 ~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~l~~~~~d---------~~i~  149 (515)
                      ..+.+++|+|||+++++ +.||.|++||+.+++.. ..+.+|..   .|.+++|||||++|++++.+         +.+.
T Consensus        17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~-~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~   94 (723)
T 1xfd_A           17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVETNTST-VLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYV   94 (723)
T ss_dssp             CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCE-EEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEE
T ss_pred             ccccccEEcCCCcEEEE-eCCCCEEEEECCCCcEE-EEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEE
Confidence            34678899999997776 78999999999987544 44555654   49999999999999999764         6788


Q ss_pred             EEeCCCCceeEEEEe---cCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCC---------------
Q psy17610        150 IWSVRTLNELLRISV---MNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRG---------------  211 (515)
Q Consensus       150 iw~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~---------------  211 (515)
                      +||+.+++. ..+..   +...+..++|+|||+.|+.++. +.|++||+.+++..... ..+...               
T Consensus        95 ~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~-~~~~~~~~~~g~~~~v~~ee~  171 (723)
T 1xfd_A           95 LSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVV-STGKEGVIYNGLSDWLYEEEI  171 (723)
T ss_dssp             EEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEE-CCCBTTTEEEEECCHHHHHTT
T ss_pred             EEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEe-cCCCCCceECcccceeEEEEe
Confidence            999998875 33432   3334788999999999999886 78999999998877655 333332               


Q ss_pred             ---eEEEEEcCCCCEEEEecCC-CcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceE
Q psy17610        212 ---VTALAITQDGTRLLSGGGE-GQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTR  287 (515)
Q Consensus       212 ---v~~~~~~~~~~~l~~~~~d-~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~  287 (515)
                         +.+++|+|||+.|++++.+ +.+.+|++.....       .+...+..+.|.++|..    ..+..|++||+.+++.
T Consensus       172 ~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~G~~----~~~~~l~~~d~~~~~~  240 (723)
T 1xfd_A          172 LKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTG-------SIYPTVKPYHYPKAGSE----NPSISLHVIGLNGPTH  240 (723)
T ss_dssp             SSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSS-------SSSCCCEEEECCBTTSC----CCEEEEEEEESSSSCC
T ss_pred             ccCcceEEECCCCCEEEEEEECCCccceEEeeccCC-------cCCCcceeccCCCCCCC----CCeeEEEEEECCCCce
Confidence               3789999999999988754 4677888742221       12345778888887763    3345899999998875


Q ss_pred             EEEEEc-------CccEEEEEEcCCCcEEEEEEC----CCeEEEEeCCCCceEEEEecCCCccE----EEEEEcCCCCEE
Q psy17610        288 LIIMIL-------PSMIMSAAYHPSEVQLITCST----NKMIDYWETCDGSIIRSLEGSDVAAV----NCVDFVDDGKYF  352 (515)
Q Consensus       288 ~~~~~~-------~~~~~~~~~~~~~~~l~~~~~----~~~i~~~d~~~~~~~~~~~~~~~~~i----~~~~~~~~~~~l  352 (515)
                      ...+..       ...+..++|+||++.+++...    +..|++||+.+++....+..++...+    ..++|+|||+.|
T Consensus       241 ~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l  320 (723)
T 1xfd_A          241 DLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKF  320 (723)
T ss_dssp             CEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSE
T ss_pred             eEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeE
Confidence            444443       346889999999998877653    35799999999987766654332333    378999999977


Q ss_pred             EE--EcCCC------eEEEEE-ccCCee--eeeccCCCCCeeE-EEECCCCcEEEEEeCC---CcEEEEeCCCCcCccCC
Q psy17610        353 LT--GGADQ------IVKMWM-YREGVP--CFVGIGHAASITK-IKISPDKKVIVSVSAD---GGIFLWTFPELEDDVGD  417 (515)
Q Consensus       353 ~~--~~~dg------~i~i~d-~~~~~~--~~~~~~~~~~i~~-~~~~~~~~~l~~~~~d---g~i~iw~~~~~~~~~~~  417 (515)
                      +.  +..++      .|.+|| ..+++.  ...+..+...+.. ++|+||++.|+..+.+   +.+++|++.......  
T Consensus       321 ~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~--  398 (723)
T 1xfd_A          321 FFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFN--  398 (723)
T ss_dssp             EEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCC--
T ss_pred             EEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCC--
Confidence            65  45666      566777 344431  4455444445554 6999999999876655   789999986432100  


Q ss_pred             CcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecC-C--eEEEEecCCCee
Q psy17610        418 SRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTN-K--MIDYWETCDGSI  475 (515)
Q Consensus       418 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-g--~v~iwd~~~~~~  475 (515)
                      ...+..             ...+...+..++|+|||++++..... .  ...+++..+++.
T Consensus       399 ~~~l~~-------------~~~~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~~~~~~~~~  446 (723)
T 1xfd_A          399 RQCLSC-------------DLVENCTYFSASFSHSMDFFLLKCEGPGVPMVTVHNTTDKKK  446 (723)
T ss_dssp             CBCSST-------------TSSSSCCCCEEEECTTSSEEEEECCSSSSCCEEEEETTTCCE
T ss_pred             cceecc-------------cccCCCCeEEEEECCCCCEEEEEccCCCCCeEEEEECCCCCE
Confidence            000000             00023447789999999988865432 2  234455544443

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.97  E-value=1.8e-28  Score=246.86  Aligned_cols=317  Identities=11%  Similarity=0.103  Sum_probs=228.0

Q ss_pred             eEEEEeCCCCcEEEEEecCCcEEEEeCCCCcee-EEEEecC-----------------eEEEEEEEeeCCCEEEEEeCCC
Q psy17610        127 IYDLQFPVNFSSVFATCSKNDIRIWSVRTLNEL-LRISVMN-----------------MICACIVFTYDGKAILSGWNDG  188 (515)
Q Consensus       127 v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~-~~~~~~~-----------------~~v~~~~~~~~~~~l~~~~~dg  188 (515)
                      +..+.|.  +..+++.+.++ | +||+.+++.+ ..+..+.                 ..+.+++|+|| +.++.+. ++
T Consensus        28 ~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~-~~  101 (706)
T 2z3z_A           28 VVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFT-QG  101 (706)
T ss_dssp             CTTCEEE--TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEE-TT
T ss_pred             CCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEE-CC
Confidence            4557777  56777777777 8 9999999873 4444333                 45899999999 6666654 59


Q ss_pred             eEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCC---ceeeEEeeccccCc----------
Q psy17610        189 FIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRE---SQSLQCVLKEHTSS----------  255 (515)
Q Consensus       189 ~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~---~~~~~~~~~~~~~~----------  255 (515)
                      .+++||+.+++.....  .+...+.+++|+|+|+.|+++ .++.|++|++...   ..........+...          
T Consensus       102 ~i~~~d~~~~~~~~l~--~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~e  178 (706)
T 2z3z_A          102 GLVGFDMLARKVTYLF--DTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQR  178 (706)
T ss_dssp             EEEEEETTTTEEEEEE--CCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGG
T ss_pred             EEEEEECCCCceEEcc--CCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhh
Confidence            9999999998776544  456778899999999999985 6799999999640   02222222323222          


Q ss_pred             ----eEEEEEecCCCEEEEEe---------------------------------CCCcEEEEEcccceEEEEEE---cCc
Q psy17610        256 ----VSVIQIKSDSKEAMSAS---------------------------------TDGTCVLWDLIKSTRLIIMI---LPS  295 (515)
Q Consensus       256 ----v~~~~~~~~~~~l~~~~---------------------------------~d~~i~iwd~~~~~~~~~~~---~~~  295 (515)
                          +..+.|+|||++|++++                                 .+..|.+||+.+++......   ...
T Consensus       179 e~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~  258 (706)
T 2z3z_A          179 EFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEK  258 (706)
T ss_dssp             CTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTC
T ss_pred             hcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCce
Confidence                47899999999999987                                 44679999999887655442   234


Q ss_pred             cEEEEEEcCCCcEEEEEECCC-----eEEEEeCCCCceEEEEe-cCCCc---cEEEEEEcC--CCCEEEEEcCCCeEEEE
Q psy17610        296 MIMSAAYHPSEVQLITCSTNK-----MIDYWETCDGSIIRSLE-GSDVA---AVNCVDFVD--DGKYFLTGGADQIVKMW  364 (515)
Q Consensus       296 ~~~~~~~~~~~~~l~~~~~~~-----~i~~~d~~~~~~~~~~~-~~~~~---~i~~~~~~~--~~~~l~~~~~dg~i~i~  364 (515)
                      .+..++|+|+++.+++++.++     .|.+||+.+++....+. .....   .+..++|+|  ||++++++..++.+++|
T Consensus       259 ~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~  338 (706)
T 2z3z_A          259 FLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLY  338 (706)
T ss_dssp             EEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEE
T ss_pred             eEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEE
Confidence            689999999999999887765     89999999984444332 22111   246789999  99999999999999999


Q ss_pred             Ecc-CCeeeeeccCCCCCeeE-EEECCCCcEEEEEeCC-C----cEEEEeCCCCcCccCCCcccceeeecccccccceee
Q psy17610        365 MYR-EGVPCFVGIGHAASITK-IKISPDKKVIVSVSAD-G----GIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLII  437 (515)
Q Consensus       365 d~~-~~~~~~~~~~~~~~i~~-~~~~~~~~~l~~~~~d-g----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  437 (515)
                      +++ ++.....+..|...+.. ++|+|+++.|+.++.+ +    .|..|++......                      .
T Consensus       339 ~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~----------------------~  396 (706)
T 2z3z_A          339 LYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTK----------------------D  396 (706)
T ss_dssp             EEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCE----------------------E
T ss_pred             EEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCce----------------------e
Confidence            886 56777778788888877 7999999888766554 3    4555565442210                      0


Q ss_pred             ecCcccEEEeeeccCCcEEEEeecC----CeEEEEecCCCe
Q psy17610        438 MILPSMIMSAAYHPSEVQLITCSTN----KMIDYWETCDGS  474 (515)
Q Consensus       438 ~~~~~~i~~~~~s~~~~~l~~~~~d----g~v~iwd~~~~~  474 (515)
                      ..+...+..++|+|||++++....+    +.|++||+.+++
T Consensus       397 l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~  437 (706)
T 2z3z_A          397 LTPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS  437 (706)
T ss_dssp             SCCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred             ccCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence            0123447889999999988876544    569999998887

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.96  E-value=1.1e-27  Score=241.19  Aligned_cols=316  Identities=9%  Similarity=0.036  Sum_probs=229.5

Q ss_pred             EEEEEEecCCCEEEEEecCceEEEEECCCCcee-EEeeccCc-----------------cCeEEEEeCCCCcEEEEEecC
Q psy17610         84 ISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTL-TLVNTCHT-----------------SAIYDLQFPVNFSSVFATCSK  145 (515)
Q Consensus        84 v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~-~~~~~~h~-----------------~~v~~~~~~~~~~~l~~~~~d  145 (515)
                      +..+.|+  |+.+++++.++ | +||+.+++.+ ..... |.                 ..|.+++|+|| +.++.+ .+
T Consensus        28 ~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~-~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~-~~  100 (706)
T 2z3z_A           28 VVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTTRFS-AADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF-TQ  100 (706)
T ss_dssp             CTTCEEE--TTEEEEEETTE-E-EEEC-------CEEEE-HHHHHTTC-----------CCCEEEEETTT-TEEEEE-ET
T ss_pred             CCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEEeec-hhHhhhhccchhccccccccCceeEEECCC-CeEEEE-EC
Confidence            4457777  66777777787 8 9999997652 33332 22                 46999999999 666666 45


Q ss_pred             CcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCC-----CceEEEecCCCCCC---------
Q psy17610        146 NDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQS-----GKLKFIIPNAHNRG---------  211 (515)
Q Consensus       146 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~-----~~~~~~~~~~~~~~---------  211 (515)
                      +.+++||+.+++. ..+..+...+.+++|+|||++|+++ .++.|++|++.+     ++..... ..+...         
T Consensus       101 ~~i~~~d~~~~~~-~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~-~~~~~~~~~g~~~~~  177 (706)
T 2z3z_A          101 GGLVGFDMLARKV-TYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVT-IDGTETLVYGQAVHQ  177 (706)
T ss_dssp             TEEEEEETTTTEE-EEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESC-SCCBTTEEESSCCGG
T ss_pred             CEEEEEECCCCce-EEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEec-cCCCCCeEcccchhh
Confidence            9999999988755 4455566678889999999999985 679999999998     7776544 233332         


Q ss_pred             -----eEEEEEcCCCCEEEEec---------------------------------CCCcEEEEEccCCceeeEEeecccc
Q psy17610        212 -----VTALAITQDGTRLLSGG---------------------------------GEGQVRIWKLTRESQSLQCVLKEHT  253 (515)
Q Consensus       212 -----v~~~~~~~~~~~l~~~~---------------------------------~d~~i~iw~~~~~~~~~~~~~~~~~  253 (515)
                           +.++.|+|||++|++++                                 .+..|.+||+.............|.
T Consensus       178 ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~  257 (706)
T 2z3z_A          178 REFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKE  257 (706)
T ss_dssp             GCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTT
T ss_pred             hhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCc
Confidence                 47899999999999887                                 4467999999654332222223566


Q ss_pred             CceEEEEEecCCCEEEEEeCCC-----cEEEEEcccc-eEEEEEEc--Cc---cEEEEEEcC--CCcEEEEEECCCeEEE
Q psy17610        254 SSVSVIQIKSDSKEAMSASTDG-----TCVLWDLIKS-TRLIIMIL--PS---MIMSAAYHP--SEVQLITCSTNKMIDY  320 (515)
Q Consensus       254 ~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~-~~~~~~~~--~~---~~~~~~~~~--~~~~l~~~~~~~~i~~  320 (515)
                      ..+..++|+||++.+++++.++     .|.+||+.++ ........  ..   .+..++|+|  ++++++++..++.+++
T Consensus       258 ~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l  337 (706)
T 2z3z_A          258 KFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHL  337 (706)
T ss_dssp             CEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEE
T ss_pred             eeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEE
Confidence            7899999999999999988775     8999999988 43333221  11   235689999  9999998988998888


Q ss_pred             EeCC-CCceEEEEecCCCccEEE-EEEcCCCCEEEEEcC-CC----eEEEEEccCCeeeeeccCCCCCeeEEEECCCCcE
Q psy17610        321 WETC-DGSIIRSLEGSDVAAVNC-VDFVDDGKYFLTGGA-DQ----IVKMWMYREGVPCFVGIGHAASITKIKISPDKKV  393 (515)
Q Consensus       321 ~d~~-~~~~~~~~~~~~~~~i~~-~~~~~~~~~l~~~~~-dg----~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~  393 (515)
                      |++. ++..+..+..+. ..+.. ++|+|+|+.|+.++. ++    .|..||..+++ ...+ .|...+.+++|+||+++
T Consensus       338 ~~~~~~~~~~~~l~~~~-~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l-~~~~~~~~~~~spdg~~  414 (706)
T 2z3z_A          338 YLYDTTGRLIRQVTKGE-WEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDL-TPESGMHRTQLSPDGSA  414 (706)
T ss_dssp             EEEETTSCEEEECCCSS-SCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEES-CCSSSEEEEEECTTSSE
T ss_pred             EEEECCCCEEEecCCCC-eEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceec-cCCCceEEEEECCCCCE
Confidence            8876 566677776554 55665 799999988765544 44    67777777665 3333 36777999999999998


Q ss_pred             EEEEeCC----CcEEEEeCCCCc
Q psy17610        394 IVSVSAD----GGIFLWTFPELE  412 (515)
Q Consensus       394 l~~~~~d----g~i~iw~~~~~~  412 (515)
                      ++....+    +.+.+||+...+
T Consensus       415 l~~~~~~~~~p~~i~l~d~~~~~  437 (706)
T 2z3z_A          415 IIDIFQSPTVPRKVTVTNIGKGS  437 (706)
T ss_dssp             EEEEEECSSCSCEEEEEESSSCE
T ss_pred             EEEEecCCCCCcEEEEEECCCCe
Confidence            8876543    469999987653

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.96  E-value=6.3e-29  Score=251.11  Aligned_cols=348  Identities=12%  Similarity=0.069  Sum_probs=240.8

Q ss_pred             cCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCe---EEEEEEEeeCCCEEEEEeCC---------CeEEE
Q psy17610        125 SAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNM---ICACIVFTYDGKAILSGWND---------GFIRC  192 (515)
Q Consensus       125 ~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~d---------g~i~~  192 (515)
                      ..+.+++|+|||+++++ +.|++|++||+.+++....+..+..   .+.+++|+|||++|++++.+         +.+.+
T Consensus        17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~   95 (723)
T 1xfd_A           17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVL   95 (723)
T ss_dssp             CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEE
T ss_pred             ccccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEE
Confidence            34678999999986654 7799999999999988777765554   38899999999999998764         78889


Q ss_pred             EecCCCceEEEe-cCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCc----------------
Q psy17610        193 FTPQSGKLKFII-PNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSS----------------  255 (515)
Q Consensus       193 ~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~----------------  255 (515)
                      ||+.+++..... ...|...+..++|+|||+.|+.++. +.|++||+.....  ......+...                
T Consensus        96 ~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~--~~~~~~~~~~~~~~g~~~~v~~ee~~  172 (723)
T 1xfd_A           96 SKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQA--IRVVSTGKEGVIYNGLSDWLYEEEIL  172 (723)
T ss_dssp             EESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCC--EEEECCCBTTTEEEEECCHHHHHTTS
T ss_pred             EECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCce--EEEecCCCCCceECcccceeEEEEec
Confidence            999998863221 1234445889999999999998876 7899999864432  3333333322                


Q ss_pred             --eEEEEEecCCCEEEEEeCC-CcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEE
Q psy17610        256 --VSVIQIKSDSKEAMSASTD-GTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSL  332 (515)
Q Consensus       256 --v~~~~~~~~~~~l~~~~~d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~  332 (515)
                        +..++|+|||+.|++++.+ +.+.+|++.....    .....+..+.+.++|..    ..+..|++||+.+++....+
T Consensus       173 ~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~G~~----~~~~~l~~~d~~~~~~~~~l  244 (723)
T 1xfd_A          173 KTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTG----SIYPTVKPYHYPKAGSE----NPSISLHVIGLNGPTHDLEM  244 (723)
T ss_dssp             SSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSS----SSSCCCEEEECCBTTSC----CCEEEEEEEESSSSCCCEEC
T ss_pred             cCcceEEECCCCCEEEEEEECCCccceEEeeccCC----cCCCcceeccCCCCCCC----CCeeEEEEEECCCCceeEEe
Confidence              3789999999999988765 4677777643211    01224677778777652    23458999999998866666


Q ss_pred             ecC-----CCccEEEEEEcCCCCEEEEEcC----CCeEEEEEccCCeeeeeccC-CCCCe----eEEEECCCCcEEEE--
Q psy17610        333 EGS-----DVAAVNCVDFVDDGKYFLTGGA----DQIVKMWMYREGVPCFVGIG-HAASI----TKIKISPDKKVIVS--  396 (515)
Q Consensus       333 ~~~-----~~~~i~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~~~~~~~~~-~~~~i----~~~~~~~~~~~l~~--  396 (515)
                      ..+     +...+..++|+|||+++++...    +..|++||+.+++....+.. +...+    ..++|+|||+.|+.  
T Consensus       245 ~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~  324 (723)
T 1xfd_A          245 MPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIR  324 (723)
T ss_dssp             CCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEE
T ss_pred             eCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEE
Confidence            543     1367899999999998876643    35799999998876665543 33433    37899999997775  


Q ss_pred             EeCCC------cEEEEeC-CCCcCccCCCcccceeeecccccccceeeecCcccEE-EeeeccCCcEEEEeecC---CeE
Q psy17610        397 VSADG------GIFLWTF-PELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIM-SAAYHPSEVQLITCSTN---KMI  465 (515)
Q Consensus       397 ~~~dg------~i~iw~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~s~~~~~l~~~~~d---g~v  465 (515)
                      ...++      .|.+||+ ......  ....+                ......+. .++|+|||+.|+..+.+   +.+
T Consensus       325 ~~~~~~~~~~~~l~~~d~~~~~~~~--~~~~l----------------~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~  386 (723)
T 1xfd_A          325 AIPQGGRGKFYHITVSSSQPNSSND--NIQSI----------------TSGDWDVTKILAYDEKGNKIYFLSTEDLPRRR  386 (723)
T ss_dssp             EECCSSSSCEEEEEEECSSCCSSSC--CCCBS----------------CCSSSCEEEEEEEETTTTEEEEEESSSCTTCC
T ss_pred             ecccCCCcceeEEEEEeccCCCCcc--ceeEe----------------ecCCeEEEeeeEEcCCCCEEEEEEcCCCCcce
Confidence            44566      4666663 222100  00000                00111133 36899999999766555   789


Q ss_pred             EEEecCCCe--eeeeecc---cccceEEEEEEcCCCcEEEEee
Q psy17610        466 DYWETCDGS--IIRSLEG---SDVAAVNCVDFVDDGKYFLTGG  503 (515)
Q Consensus       466 ~iwd~~~~~--~~~~~~~---~~~~~v~~~~~s~~~~~l~s~~  503 (515)
                      ++|++....  ....+..   +. ..+..++|+|||++|+...
T Consensus       387 ~l~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~spdg~~l~~~~  428 (723)
T 1xfd_A          387 QLYSANTVGNFNRQCLSCDLVEN-CTYFSASFSHSMDFFLLKC  428 (723)
T ss_dssp             EEEEECSSTTCCCBCSSTTSSSS-CCCCEEEECTTSSEEEEEC
T ss_pred             EEEEEeCCCCCCcceecccccCC-CCeEEEEECCCCCEEEEEc
Confidence            999986432  3334443   33 6688999999999888643

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.96  E-value=1.1e-26  Score=212.81  Aligned_cols=297  Identities=13%  Similarity=0.107  Sum_probs=207.3

Q ss_pred             EEEEeCCCeEEEEecC-CCceEEEecCCCCCCeEEEEEcCCCCEEEEecCC-CcEEEEEcc--CCceeeEEeeccccCce
Q psy17610        181 ILSGWNDGFIRCFTPQ-SGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGE-GQVRIWKLT--RESQSLQCVLKEHTSSV  256 (515)
Q Consensus       181 l~~~~~dg~i~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~~i~iw~~~--~~~~~~~~~~~~~~~~v  256 (515)
                      +++++.++.|++|++. +++........+...+.+++|+|++++|++++.+ +.|.+|+++  .........+..+. .+
T Consensus         8 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~   86 (343)
T 1ri6_A            8 YIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SL   86 (343)
T ss_dssp             EEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CC
T ss_pred             EEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CC
Confidence            3444779999999995 3432222113577788999999999988888876 999999996  33333444444443 78


Q ss_pred             EEEEEecCCCEEEEEeC-CCcEEEEEc---ccceEEEEEEcCccEEEEEEcCCCcEEEEEE-CCCeEEEEeCCC-CceEE
Q psy17610        257 SVIQIKSDSKEAMSAST-DGTCVLWDL---IKSTRLIIMILPSMIMSAAYHPSEVQLITCS-TNKMIDYWETCD-GSIIR  330 (515)
Q Consensus       257 ~~~~~~~~~~~l~~~~~-d~~i~iwd~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~i~~~d~~~-~~~~~  330 (515)
                      ..++|+|+++++++++. ++.|.+||+   ...+....+.....+..++|+|+++++++++ .++.|.+||+.+ ++...
T Consensus        87 ~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~  166 (343)
T 1ri6_A           87 THISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVA  166 (343)
T ss_dssp             SEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEE
T ss_pred             cEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceee
Confidence            89999999998877765 788999999   5555666666666789999999999888887 889999999987 55432


Q ss_pred             ----EEecCCCccEEEEEEcCCCCEEEEE-cCCCeEEEEEccC--Cee--eeec---cCC---CCCeeEEEECCCCcEEE
Q psy17610        331 ----SLEGSDVAAVNCVDFVDDGKYFLTG-GADQIVKMWMYRE--GVP--CFVG---IGH---AASITKIKISPDKKVIV  395 (515)
Q Consensus       331 ----~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~~~--~~~--~~~~---~~~---~~~i~~~~~~~~~~~l~  395 (515)
                          ....+....+..++|+|++++++++ ..++.+.+|++..  ++.  ....   ...   ...+..++|+|++++|+
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~  246 (343)
T 1ri6_A          167 QDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLY  246 (343)
T ss_dssp             EEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEE
T ss_pred             ecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEE
Confidence                3344333578899999999977554 4789999999953  322  2222   111   23567899999998887


Q ss_pred             EE-eCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEee-cCCeEEEEec--C
Q psy17610        396 SV-SADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCS-TNKMIDYWET--C  471 (515)
Q Consensus       396 ~~-~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~v~iwd~--~  471 (515)
                      ++ ..++.|.+|++.........                ..... ....+..++|+|++++|++++ .++.|.+|++  .
T Consensus       247 v~~~~~~~i~v~d~~~~~~~~~~----------------~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~  309 (343)
T 1ri6_A          247 ACDRTASLITVFSVSEDGSVLSK----------------EGFQP-TETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGE  309 (343)
T ss_dssp             EEETTTTEEEEEEECTTSCCEEE----------------EEEEE-CSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETT
T ss_pred             EEecCCCEEEEEEEcCCCCceEE----------------eeeec-CCCccceEEECCCCCEEEEecCCCCeEEEEEEcCC
Confidence            54 47899999998732110000                00011 112277899999999888887 6799999954  4


Q ss_pred             CCee--eeeecccccceEEEEEEcCCCc
Q psy17610        472 DGSI--IRSLEGSDVAAVNCVDFVDDGK  497 (515)
Q Consensus       472 ~~~~--~~~~~~~~~~~v~~~~~s~~~~  497 (515)
                      +++.  +..+...  ....+++|.|+.+
T Consensus       310 ~g~~~~~~~~~~g--~~p~~i~~~~~~~  335 (343)
T 1ri6_A          310 QGLLHEKGRYAVG--QGPMWVVVNAHEG  335 (343)
T ss_dssp             TTEEEEEEEEECS--SSCCEEEEEEEC-
T ss_pred             CceeeEccccccC--CCCeeEEEEcccC
Confidence            6643  3444432  4566778877654

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.96  E-value=1.9e-26  Score=209.93  Aligned_cols=280  Identities=11%  Similarity=0.092  Sum_probs=208.5

Q ss_pred             EEEecCCCE-EEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec-CCcEEEEeCCCCce-eEEEE
Q psy17610         87 LQYNPVNNK-VFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS-KNDIRIWSVRTLNE-LLRIS  163 (515)
Q Consensus        87 ~~~s~~~~~-l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~-~~~~~  163 (515)
                      ..|.+++++ ++++..++.|.+||.++++...... .+...+ .++|+|+++++++++. ++.|.+||+.+++. ...+.
T Consensus         3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~   80 (331)
T 3u4y_A            3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQIT-LGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQ   80 (331)
T ss_dssp             ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEE-CCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEE
T ss_pred             eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEE-ccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecc
Confidence            356666665 5667778999999999976555444 345556 9999999998888777 88999999999987 77777


Q ss_pred             ecCeEEEEEEEeeCCCEEEEEeCCC---eEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEe-cCCCc-EEEEEc
Q psy17610        164 VMNMICACIVFTYDGKAILSGWNDG---FIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSG-GGEGQ-VRIWKL  238 (515)
Q Consensus       164 ~~~~~v~~~~~~~~~~~l~~~~~dg---~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~-i~iw~~  238 (515)
                      .+..+..+++|+|++++++++..++   .|.+||+.+++.+..+.  ......+++|+|+|++++++ ..++. +.+|++
T Consensus        81 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~--~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~  158 (331)
T 3u4y_A           81 EGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIP--IPYDAVGIAISPNGNGLILIDRSSANTVRRFKI  158 (331)
T ss_dssp             ECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEE--CCTTEEEEEECTTSSCEEEEEETTTTEEEEEEE
T ss_pred             cCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEE--CCCCccceEECCCCCEEEEEecCCCceEEEEEE
Confidence            7766666599999999999555553   89999999999887763  34557999999999865554 55578 999998


Q ss_pred             cCCceeeE--EeeccccCceEEEEEecCCCEEEEEe-CCCcEEEEEcccceE---EEEEEcCccEEEEEEcCCCcEEEEE
Q psy17610        239 TRESQSLQ--CVLKEHTSSVSVIQIKSDSKEAMSAS-TDGTCVLWDLIKSTR---LIIMILPSMIMSAAYHPSEVQLITC  312 (515)
Q Consensus       239 ~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~  312 (515)
                      ........  ............++|+|++++++.++ .++.|.+||+.+++.   +..+.....+..++|+|++++++++
T Consensus       159 ~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~  238 (331)
T 3u4y_A          159 DADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVL  238 (331)
T ss_dssp             CTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEE
T ss_pred             CCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEE
Confidence            64321111  11113345578999999999766555 688999999998887   7777777788899999999987766


Q ss_pred             E-CCCeEEEEeCCCCce--EEEEecC----C--CccEEEEEEcCCCCEEEEEc-CCCeEEEEEccCCe
Q psy17610        313 S-TNKMIDYWETCDGSI--IRSLEGS----D--VAAVNCVDFVDDGKYFLTGG-ADQIVKMWMYREGV  370 (515)
Q Consensus       313 ~-~~~~i~~~d~~~~~~--~~~~~~~----~--~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~  370 (515)
                      . .++.|.+||+.+++.  +..+...    .  ......++|+|+|++|++++ .++.|.+||+....
T Consensus       239 ~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~  306 (331)
T 3u4y_A          239 TESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKV  306 (331)
T ss_dssp             CSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCE
T ss_pred             EcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCc
Confidence            5 477899999999877  4444322    1  01224589999999886554 56799999997654

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.96  E-value=6.2e-26  Score=208.65  Aligned_cols=273  Identities=11%  Similarity=0.154  Sum_probs=220.4

Q ss_pred             cCCCcEEEEEEecCCCEEEEEec-------CceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec-CCcEEE
Q psy17610         79 KDDSGISSLQYNPVNNKVFVGTV-------NCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS-KNDIRI  150 (515)
Q Consensus        79 ~~~~~v~~~~~s~~~~~l~~~~~-------d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-d~~i~i  150 (515)
                      .....+..++|+|+++++++++.       ++.|.+||..+++....+.  ....+..++|+|+++++++++. ++.|.+
T Consensus        38 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~v~~~~~~~v~~  115 (353)
T 3vgz_A           38 AVGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIH--NDLKPFGATINNTTQTLWFGNTVNSAVTA  115 (353)
T ss_dssp             EEESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEE--ESSCCCSEEEETTTTEEEEEETTTTEEEE
T ss_pred             hhccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEe--cCCCcceEEECCCCCEEEEEecCCCEEEE
Confidence            44567889999999999988873       5789999999976555443  2345788999999997776665 799999


Q ss_pred             EeCCCCceeEEEEecCe---------EEEEEEEeeCCCEEEEEe--CCCeEEEEecCCCceEEEecCCCCCCeEEEEEcC
Q psy17610        151 WSVRTLNELLRISVMNM---------ICACIVFTYDGKAILSGW--NDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQ  219 (515)
Q Consensus       151 w~~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~l~~~~--~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  219 (515)
                      ||..+++.+..+..+..         .+.+++|+|++++++++.  .++.|.+||+.+++....+. .+...+..++|+|
T Consensus       116 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~~~~~~s~  194 (353)
T 3vgz_A          116 IDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQ-NTGKMSTGLALDS  194 (353)
T ss_dssp             EETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEEC-CCCTTCCCCEEET
T ss_pred             EeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEec-CCCCccceEEECC
Confidence            99999998888875432         268899999999888776  47889999999999888773 3555688999999


Q ss_pred             CCCEEEEecCCCcEEEEEccCCceeeEEeec----cccCceEEEEEecCCCEEEEEeC-CCcEEEEEcccceEEEEEEcC
Q psy17610        220 DGTRLLSGGGEGQVRIWKLTRESQSLQCVLK----EHTSSVSVIQIKSDSKEAMSAST-DGTCVLWDLIKSTRLIIMILP  294 (515)
Q Consensus       220 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~  294 (515)
                      +++++++++.++.|.+||.....  ....+.    ++...+..++|+|+++++++++. ++.|.+||..+++....+..+
T Consensus       195 dg~~l~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~  272 (353)
T 3vgz_A          195 EGKRLYTTNADGELITIDTADNK--ILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAP  272 (353)
T ss_dssp             TTTEEEEECTTSEEEEEETTTTE--EEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECS
T ss_pred             CCCEEEEEcCCCeEEEEECCCCe--EEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcC
Confidence            99999999999999999996443  333333    24556788999999998777665 489999999999988887766


Q ss_pred             ccEEEEEEcCCCcEEEEEE-CCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCC
Q psy17610        295 SMIMSAAYHPSEVQLITCS-TNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQ  359 (515)
Q Consensus       295 ~~~~~~~~~~~~~~l~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg  359 (515)
                      .+ ..++|+|++++++++. .++.|.+||..+++.+..+...  ..+.+++|+|+|++++++..++
T Consensus       273 ~~-~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~v~~~~~  335 (353)
T 3vgz_A          273 ES-LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTP--THPNSLALSADGKTLYVSVKQK  335 (353)
T ss_dssp             SC-CCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECC--SEEEEEEECTTSCEEEEEEECC
T ss_pred             CC-ceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecC--CCCCeEEEcCCCCEEEEEEccc
Confidence            54 5799999999776666 6899999999999998888765  5778999999999887776553

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.96  E-value=2.3e-26  Score=210.70  Aligned_cols=270  Identities=11%  Similarity=0.113  Sum_probs=193.4

Q ss_pred             EEecCCCcEEEEEEecCCCEEEEEecC-ceEEEEECC--CCcee-EEeeccCccCeEEEEeCCCCcEEEEEec-CCcEEE
Q psy17610         76 YLLKDDSGISSLQYNPVNNKVFVGTVN-CEIFLIDMN--SGFTL-TLVNTCHTSAIYDLQFPVNFSSVFATCS-KNDIRI  150 (515)
Q Consensus        76 ~~~~~~~~v~~~~~s~~~~~l~~~~~d-~~i~iw~~~--~~~~~-~~~~~~h~~~v~~~~~~~~~~~l~~~~~-d~~i~i  150 (515)
                      ....|...+.+++|+|++++|++++.+ +.|.+|+++  ++... ......+ ..+..++|+|+++++++++. ++.|.+
T Consensus        32 ~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~i~~  110 (343)
T 1ri6_A           32 QVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP-GSLTHISTDHQGQFVFVGSYNAGNVSV  110 (343)
T ss_dssp             EEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS-SCCSEEEECTTSSEEEEEETTTTEEEE
T ss_pred             eeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC-CCCcEEEEcCCCCEEEEEecCCCeEEE
Confidence            334577889999999999999998876 899999997  54322 2233323 37899999999998888776 788999


Q ss_pred             EeCC---CCceeEEEEecCeEEEEEEEeeCCCEEEEEe-CCCeEEEEecCC-CceEE----EecCCCCCCeEEEEEcCCC
Q psy17610        151 WSVR---TLNELLRISVMNMICACIVFTYDGKAILSGW-NDGFIRCFTPQS-GKLKF----IIPNAHNRGVTALAITQDG  221 (515)
Q Consensus       151 w~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~~~~~-~~~~~----~~~~~~~~~v~~~~~~~~~  221 (515)
                      ||+.   +.+.+..+..+ ..+.+++|+|+++++++++ .++.|.+||+.+ ++...    .........+..++|+|++
T Consensus       111 ~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg  189 (343)
T 1ri6_A          111 TRLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNE  189 (343)
T ss_dssp             EEEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTS
T ss_pred             EECCCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCC
Confidence            9994   33334444333 3478899999999888887 889999999987 65432    2223345578899999999


Q ss_pred             CEEEEe-cCCCcEEEEEccCCceee--EEeec---cc---cCceEEEEEecCCCEEEEEe-CCCcEEEEEcc----cceE
Q psy17610        222 TRLLSG-GGEGQVRIWKLTRESQSL--QCVLK---EH---TSSVSVIQIKSDSKEAMSAS-TDGTCVLWDLI----KSTR  287 (515)
Q Consensus       222 ~~l~~~-~~d~~i~iw~~~~~~~~~--~~~~~---~~---~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~----~~~~  287 (515)
                      ++++++ ..++.|.+|+++......  .....   ..   ...+..++|+|++++++++. .++.|.+||+.    ..+.
T Consensus       190 ~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~  269 (343)
T 1ri6_A          190 QYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSK  269 (343)
T ss_dssp             SEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEE
T ss_pred             CEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEE
Confidence            977654 478999999995422221  22221   11   23566899999999887554 78999999998    3445


Q ss_pred             EEEEEcCccEEEEEEcCCCcEEEEEE-CCCeEEEE--eCCCCce--EEEEecCCCccEEEEEEcCCC
Q psy17610        288 LIIMILPSMIMSAAYHPSEVQLITCS-TNKMIDYW--ETCDGSI--IRSLEGSDVAAVNCVDFVDDG  349 (515)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~i~~~--d~~~~~~--~~~~~~~~~~~i~~~~~~~~~  349 (515)
                      +..+.....+..++|+|+++++++++ .++.+.+|  |..+++.  +..+...  ....+++|.|+.
T Consensus       270 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~g--~~p~~i~~~~~~  334 (343)
T 1ri6_A          270 EGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVG--QGPMWVVVNAHE  334 (343)
T ss_dssp             EEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECS--SSCCEEEEEEEC
T ss_pred             eeeecCCCccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccccccC--CCCeeEEEEccc
Confidence            55555555688999999999988888 57999999  5445543  3344432  345567776643

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.96  E-value=9.1e-26  Score=205.49  Aligned_cols=275  Identities=9%  Similarity=0.038  Sum_probs=203.0

Q ss_pred             EEeCCCCcEEEE-EecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeC-CCeEEEEecCCCce-EEEecC
Q psy17610        130 LQFPVNFSSVFA-TCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWN-DGFIRCFTPQSGKL-KFIIPN  206 (515)
Q Consensus       130 ~~~~~~~~~l~~-~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~~~~~~~~~~-~~~~~~  206 (515)
                      ..|.+++.++++ ...++.|.+||+++++.+..+..+...+ .++|+|+++++++++. ++.|.+||+.+++. ...+ .
T Consensus         3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~-~   80 (331)
T 3u4y_A            3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAI-Q   80 (331)
T ss_dssp             ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEE-E
T ss_pred             eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEec-c
Confidence            346666666554 4558999999999999988888766677 9999999997776665 88999999999987 5555 4


Q ss_pred             CCCCCeEEEEEcCCCCEEEEecCCC---cEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEE-eCCCc-EEEEE
Q psy17610        207 AHNRGVTALAITQDGTRLLSGGGEG---QVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSA-STDGT-CVLWD  281 (515)
Q Consensus       207 ~~~~~v~~~~~~~~~~~l~~~~~d~---~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~-i~iwd  281 (515)
                      .+..+..+++|+|++++++++..++   .|.+||+...  .....+.. ......++|+|++++++++ ..++. +.+|+
T Consensus        81 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~--~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~  157 (331)
T 3u4y_A           81 EGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKN--KFISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFK  157 (331)
T ss_dssp             ECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTT--EEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEE
T ss_pred             cCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCC--CeEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEE
Confidence            4555555599999999999665553   8999999543  33444443 3456899999999866655 55588 99999


Q ss_pred             cccceE-----EEEEEcCccEEEEEEcCCCcEEEEEE-CCCeEEEEeCCCCce---EEEEecCCCccEEEEEEcCCCCEE
Q psy17610        282 LIKSTR-----LIIMILPSMIMSAAYHPSEVQLITCS-TNKMIDYWETCDGSI---IRSLEGSDVAAVNCVDFVDDGKYF  352 (515)
Q Consensus       282 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~i~~~d~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~l  352 (515)
                      +.....     ...+........++|+|++++++++. .++.|.+||+.+++.   +..+...  ..+..++|+|+|+++
T Consensus       158 ~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~--~~~~~~~~spdg~~l  235 (331)
T 3u4y_A          158 IDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN--NLPGTIVVSRDGSTV  235 (331)
T ss_dssp             ECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS--SCCCCEEECTTSSEE
T ss_pred             ECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC--CCCceEEECCCCCEE
Confidence            865322     22333445689999999999776655 588999999999988   7777654  567889999999977


Q ss_pred             EEEc-CCCeEEEEEccCCee--eeeccCC----CC---CeeEEEECCCCcEEEEEeC-CCcEEEEeCCCC
Q psy17610        353 LTGG-ADQIVKMWMYREGVP--CFVGIGH----AA---SITKIKISPDKKVIVSVSA-DGGIFLWTFPEL  411 (515)
Q Consensus       353 ~~~~-~dg~i~i~d~~~~~~--~~~~~~~----~~---~i~~~~~~~~~~~l~~~~~-dg~i~iw~~~~~  411 (515)
                      +++. .++.|.+||..+++.  +..+..+    ..   ....++|+||+++|++++. ++.|.+||+...
T Consensus       236 ~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~  305 (331)
T 3u4y_A          236 YVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGK  305 (331)
T ss_dssp             EEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSC
T ss_pred             EEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCC
Confidence            6655 477899999998876  3332222    22   2356899999998876655 569999998754

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.96  E-value=4.7e-25  Score=202.79  Aligned_cols=272  Identities=10%  Similarity=0.070  Sum_probs=219.2

Q ss_pred             CccCeEEEEeCCCCcEEEEEec-------CCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEE-eCCCeEEEEe
Q psy17610        123 HTSAIYDLQFPVNFSSVFATCS-------KNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSG-WNDGFIRCFT  194 (515)
Q Consensus       123 h~~~v~~~~~~~~~~~l~~~~~-------d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~~~~  194 (515)
                      ....+..++|+|+++++++++.       ++.|.+||..+++.+..+.... .+..++|+|++++++++ ..++.|.+||
T Consensus        39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~v~~~~~~~v~~~d  117 (353)
T 3vgz_A           39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDL-KPFGATINNTTQTLWFGNTVNSAVTAID  117 (353)
T ss_dssp             EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESS-CCCSEEEETTTTEEEEEETTTTEEEEEE
T ss_pred             hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCC-CcceEEECCCCCEEEEEecCCCEEEEEe
Confidence            3456889999999999988884       4679999999999888887543 46789999999966655 4579999999


Q ss_pred             cCCCceEEEecCCCCC--------CeEEEEEcCCCCEEEEec--CCCcEEEEEccCCceeeEEeeccccCceEEEEEecC
Q psy17610        195 PQSGKLKFIIPNAHNR--------GVTALAITQDGTRLLSGG--GEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSD  264 (515)
Q Consensus       195 ~~~~~~~~~~~~~~~~--------~v~~~~~~~~~~~l~~~~--~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~  264 (515)
                      ..+++....+...+..        .+.+++|+|+++++++++  .++.|.+||..  +......+..+...+..++|+|+
T Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~--~~~~~~~~~~~~~~~~~~~~s~d  195 (353)
T 3vgz_A          118 AKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGG--NIKLKTAIQNTGKMSTGLALDSE  195 (353)
T ss_dssp             TTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETT--TTEEEEEECCCCTTCCCCEEETT
T ss_pred             CCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCC--CCceEEEecCCCCccceEEECCC
Confidence            9999988777433222        278899999999887765  47889999995  34445555545566888999999


Q ss_pred             CCEEEEEeCCCcEEEEEcccceEEEEEEc-----CccEEEEEEcCCCcEEEEEEC-CCeEEEEeCCCCceEEEEecCCCc
Q psy17610        265 SKEAMSASTDGTCVLWDLIKSTRLIIMIL-----PSMIMSAAYHPSEVQLITCST-NKMIDYWETCDGSIIRSLEGSDVA  338 (515)
Q Consensus       265 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~-~~~i~~~d~~~~~~~~~~~~~~~~  338 (515)
                      ++++++++.++.+.+||+.+++....+..     ...+..++++|++++++++.. ++.|.+||..+++.+..+....  
T Consensus       196 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~--  273 (353)
T 3vgz_A          196 GKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE--  273 (353)
T ss_dssp             TTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS--
T ss_pred             CCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC--
Confidence            99999999999999999999998887765     234778999999998877765 4899999999999988888654  


Q ss_pred             cEEEEEEcCCCCEEEEEc-CCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCC
Q psy17610        339 AVNCVDFVDDGKYFLTGG-ADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADG  401 (515)
Q Consensus       339 ~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg  401 (515)
                       ...++|+|+|++++++. .++.|.+||..+++.+..+... ..+.+++|+|++++|+++..++
T Consensus       274 -~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~  335 (353)
T 3vgz_A          274 -SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTP-THPNSLALSADGKTLYVSVKQK  335 (353)
T ss_dssp             -CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECC-SEEEEEEECTTSCEEEEEEECC
T ss_pred             -CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecC-CCCCeEEEcCCCCEEEEEEccc
Confidence             25689999999665554 6899999999999888777544 4679999999999887776654

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.95  E-value=1e-25  Score=205.80  Aligned_cols=272  Identities=12%  Similarity=0.070  Sum_probs=210.9

Q ss_pred             CEEEEEecCceEEEEECCCCceeEEeeccCcc-CeEEEEeCCCCcEEEEEec-CCcEEEEeCCCCceeEEEEecC-----
Q psy17610         94 NKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTS-AIYDLQFPVNFSSVFATCS-KNDIRIWSVRTLNELLRISVMN-----  166 (515)
Q Consensus        94 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~~-----  166 (515)
                      ++|++++.++.|.+||..+++.+..+..++.. .+..++|+|+++.+++++. ++.|.+||+.+++.+..+....     
T Consensus         2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~   81 (337)
T 1pby_B            2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV   81 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred             cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence            47889999999999999997665554433322 4889999999988766655 7899999999998887776321     


Q ss_pred             eEEEEEEEeeCCCEEEEEe------------CCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEE
Q psy17610        167 MICACIVFTYDGKAILSGW------------NDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVR  234 (515)
Q Consensus       167 ~~v~~~~~~~~~~~l~~~~------------~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~  234 (515)
                      ..+..++|+|+|++++++.            .++.|.+||+.+++....+..  ...+..++|+|++++++++  ++.|.
T Consensus        82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~--~~~i~  157 (337)
T 1pby_B           82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA--PRQITMLAWARDGSKLYGL--GRDLH  157 (337)
T ss_dssp             ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC--CSSCCCEEECTTSSCEEEE--SSSEE
T ss_pred             ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC--CCCcceeEECCCCCEEEEe--CCeEE
Confidence            2466799999999998886            579999999999988777632  4567889999999988887  58899


Q ss_pred             EEEccCCceeeEEeecccc--CceEEEEEecCCCEEEEEeCCC------------------------cEEEEEcccceEE
Q psy17610        235 IWKLTRESQSLQCVLKEHT--SSVSVIQIKSDSKEAMSASTDG------------------------TCVLWDLIKSTRL  288 (515)
Q Consensus       235 iw~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~d~------------------------~i~iwd~~~~~~~  288 (515)
                      +||+...  .....+..+.  .+   +.|+|+++.++..+..+                        .|.+||+.+++..
T Consensus       158 ~~d~~~~--~~~~~~~~~~~~~~---~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~  232 (337)
T 1pby_B          158 VMDPEAG--TLVEDKPIQSWEAE---TYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA  232 (337)
T ss_dssp             EEETTTT--EEEEEECSTTTTTT---TBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE
T ss_pred             EEECCCC--cEeeeeeccccCCC---ceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce
Confidence            9999643  3333333332  32   36788888766554332                        4689999988765


Q ss_pred             EE--EEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEc
Q psy17610        289 II--MILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMY  366 (515)
Q Consensus       289 ~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~  366 (515)
                      ..  ......+..++|+|++++++++  ++.|.+||+.+++.+..+...  ..+.+++|+|+|++|++++.++.|.+||+
T Consensus       233 ~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~~i~v~d~  308 (337)
T 1pby_B          233 MREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP--HSYYSVNVSTDGSTVWLGGALGDLAAYDA  308 (337)
T ss_dssp             EEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS--SCCCEEEECTTSCEEEEESBSSEEEEEET
T ss_pred             EeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCC--CceeeEEECCCCCEEEEEcCCCcEEEEEC
Confidence            21  1233467889999999999888  789999999999988888755  46789999999999999999999999999


Q ss_pred             cCCeeeeeccCC
Q psy17610        367 REGVPCFVGIGH  378 (515)
Q Consensus       367 ~~~~~~~~~~~~  378 (515)
                      .+++.+..+..+
T Consensus       309 ~~~~~~~~~~~~  320 (337)
T 1pby_B          309 ETLEKKGQVDLP  320 (337)
T ss_dssp             TTCCEEEEEECG
T ss_pred             cCCcEEEEEEcC
Confidence            999887776544

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.95  E-value=1.4e-25  Score=204.97  Aligned_cols=244  Identities=10%  Similarity=0.058  Sum_probs=194.4

Q ss_pred             cEEEEEEecCCCEEEE-EecCceEEEEECCCCceeEEeeccC----ccCeEEEEeCCCCcEEEEEe------------cC
Q psy17610         83 GISSLQYNPVNNKVFV-GTVNCEIFLIDMNSGFTLTLVNTCH----TSAIYDLQFPVNFSSVFATC------------SK  145 (515)
Q Consensus        83 ~v~~~~~s~~~~~l~~-~~~d~~i~iw~~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~l~~~~------------~d  145 (515)
                      .+..++|+|+++++++ +..++.|.+||+.+++.+..+..++    ...+.+++|+|+|++++++.            .+
T Consensus        35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~  114 (337)
T 1pby_B           35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP  114 (337)
T ss_dssp             CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred             CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence            4778999999987755 4557899999999876555443333    23678899999999998886            57


Q ss_pred             CcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCC-CCCeEEEEEcCCCCEE
Q psy17610        146 NDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAH-NRGVTALAITQDGTRL  224 (515)
Q Consensus       146 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l  224 (515)
                      +.|.+||+.+++.+..+.. ...+.+++|+|++++|+++  ++.|.+||+.+++....+...+ ..+   +.|+|++..+
T Consensus       115 ~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~---~~~s~dg~~l  188 (337)
T 1pby_B          115 TRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAE---TYAQPDVLAV  188 (337)
T ss_dssp             CEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTT---TBCCCBCCCC
T ss_pred             ceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCC---ceeCCCccEE
Confidence            9999999999888777764 3456788999999988887  6889999999999887764333 133   3789998876


Q ss_pred             EEecCCC------------------------cEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEE
Q psy17610        225 LSGGGEG------------------------QVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLW  280 (515)
Q Consensus       225 ~~~~~d~------------------------~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw  280 (515)
                      +..+..+                        .|.+||+...... ...+..+...+..++|+|++++++++  ++.|.+|
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~  265 (337)
T 1pby_B          189 WNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESF  265 (337)
T ss_dssp             CCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEE
T ss_pred             eeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-EeecCCCCCceeeEEECCCCCEEEEe--CCeEEEE
Confidence            6554332                        4688998755443 34455566778899999999999888  6899999


Q ss_pred             EcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecC
Q psy17610        281 DLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGS  335 (515)
Q Consensus       281 d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~  335 (515)
                      |+.+++....+.....+.+++|+|+++++++++.++.|.+||+.+++.+..+..+
T Consensus       266 d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~  320 (337)
T 1pby_B          266 DLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLP  320 (337)
T ss_dssp             ETTTTEEEEEEECSSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECG
T ss_pred             ECCCCcCcceecCCCceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcC
Confidence            9999998888888788899999999999999988999999999999998888765

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.95  E-value=4.7e-26  Score=203.93  Aligned_cols=254  Identities=14%  Similarity=0.109  Sum_probs=196.8

Q ss_pred             ecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCC-CceEEEecCCCCCCeEEEEEcCCC
Q psy17610        143 CSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQS-GKLKFIIPNAHNRGVTALAITQDG  221 (515)
Q Consensus       143 ~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~  221 (515)
                      +.++.|++||+.+++.. .+..+...+.+++|+|++++|++++ ++.|.+||+.+ ++........+...+.+++|+|++
T Consensus        19 ~~~~~i~~~d~~~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg   96 (297)
T 2ojh_A           19 SMRSSIEIFNIRTRKMR-VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDG   96 (297)
T ss_dssp             CCCEEEEEEETTTTEEE-EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTS
T ss_pred             CcceeEEEEeCCCCcee-eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCC
Confidence            45889999999987755 5556788999999999999999886 78999999999 877765533334778999999999


Q ss_pred             CEEEEec--CCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEE-EEeCCCcEEEEEc--ccceEEEEEEcCcc
Q psy17610        222 TRLLSGG--GEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAM-SASTDGTCVLWDL--IKSTRLIIMILPSM  296 (515)
Q Consensus       222 ~~l~~~~--~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~iwd~--~~~~~~~~~~~~~~  296 (515)
                      ++|++++  .++...+|.++..... ...+..+ ..+..++|+|+++.++ ++..++.+.+|++  .+++..........
T Consensus        97 ~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  174 (297)
T 2ojh_A           97 ALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGR  174 (297)
T ss_dssp             SEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSC
T ss_pred             CEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCc
Confidence            9999988  4456666666433333 2233333 3488899999999887 6778899999985  34455444455567


Q ss_pred             EEEEEEcCCCcEEEEEE-CCCeEEEEeCC-CCceEEEEecCCCccEEEEEEcCCCCEEEEEcCC-----------CeEEE
Q psy17610        297 IMSAAYHPSEVQLITCS-TNKMIDYWETC-DGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGAD-----------QIVKM  363 (515)
Q Consensus       297 ~~~~~~~~~~~~l~~~~-~~~~i~~~d~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----------g~i~i  363 (515)
                      +..++|+|+++.+++++ .++.+.+|++. .+.....+..+. ..+..++|+|+|++|++++.+           +.|.+
T Consensus       175 ~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~  253 (297)
T 2ojh_A          175 NDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSA-YGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQL  253 (297)
T ss_dssp             EEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCS-EEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEE
T ss_pred             cccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCC-cccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEE
Confidence            99999999999888776 48889999876 455566665554 788899999999999888765           56999


Q ss_pred             EEccCCee--eeeccCCCCCeeEEEECCCCcEEEEEeCCC
Q psy17610        364 WMYREGVP--CFVGIGHAASITKIKISPDKKVIVSVSADG  401 (515)
Q Consensus       364 ~d~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg  401 (515)
                      ||+.+++.  +..+.+|...+..++|+|++++|++++.+.
T Consensus       254 ~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~  293 (297)
T 2ojh_A          254 MDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP  293 (297)
T ss_dssp             EETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred             EecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence            99988755  444457888999999999999999887654

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.94  E-value=1.5e-23  Score=192.08  Aligned_cols=276  Identities=11%  Similarity=0.096  Sum_probs=189.5

Q ss_pred             EEEEEe----cCceEEEEECC--CCceeEEeeccCccCeEEEEeCCCCcEEEEEec---CCcEEEEeCCCCc--eeEEEE
Q psy17610         95 KVFVGT----VNCEIFLIDMN--SGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS---KNDIRIWSVRTLN--ELLRIS  163 (515)
Q Consensus        95 ~l~~~~----~d~~i~iw~~~--~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~---d~~i~iw~~~~~~--~~~~~~  163 (515)
                      .+++|+    .++.|.+|+++  ++.........+...+..++|+|||+ |++++.   ++.|.+|++.+++  .+..+.
T Consensus         4 ~~~vg~y~~~~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~   82 (347)
T 3hfq_A            4 RILFGTYTKKTSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVV   82 (347)
T ss_dssp             EEEEEECCSSSCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEE
T ss_pred             EEEEEeccCCCCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeee
Confidence            455553    23456666554  54433323334567788999999998 776665   5899999997665  344445


Q ss_pred             ecCeEEEEEEEeeCCCEEEEEe-CCCeEEEEecC-CCce--EEEecCC--------CCCCeEEEEEcCCCCEEEEecCCC
Q psy17610        164 VMNMICACIVFTYDGKAILSGW-NDGFIRCFTPQ-SGKL--KFIIPNA--------HNRGVTALAITQDGTRLLSGGGEG  231 (515)
Q Consensus       164 ~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~~~~-~~~~--~~~~~~~--------~~~~v~~~~~~~~~~~l~~~~~d~  231 (515)
                      .+...+..++|+|+|++|++++ .++.+.+|++. ++..  +..+...        +...+.+++|+|+|+.+++...++
T Consensus        83 ~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~  162 (347)
T 3hfq_A           83 APGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSD  162 (347)
T ss_dssp             EESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTT
T ss_pred             cCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCC
Confidence            5667788999999999998887 67999999996 3332  2322111        123488999999999666777788


Q ss_pred             cEEEEEcc-CCceeeEEeecc-ccCceEEEEEecCCCEEEEE-eCCCcEEEEEccc--ceEE--EEEEc-C------ccE
Q psy17610        232 QVRIWKLT-RESQSLQCVLKE-HTSSVSVIQIKSDSKEAMSA-STDGTCVLWDLIK--STRL--IIMIL-P------SMI  297 (515)
Q Consensus       232 ~i~iw~~~-~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~--~~~~--~~~~~-~------~~~  297 (515)
                      .|.+|++. ............ ....+..++|+|+|++++++ ..++.+.+|++..  ++..  ..... +      ..+
T Consensus       163 ~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  242 (347)
T 3hfq_A          163 KVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGA  242 (347)
T ss_dssp             EEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEE
T ss_pred             EEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcc
Confidence            99999997 222222222222 22357789999999976664 5678999999874  4432  22221 1      348


Q ss_pred             EEEEEcCCCcEEE-EEECCCeEEEEeCCCC---ceEEEEecCCCccEEEEEEcCCCCEEEEEcC-CCeEEEEEc--cCCe
Q psy17610        298 MSAAYHPSEVQLI-TCSTNKMIDYWETCDG---SIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA-DQIVKMWMY--REGV  370 (515)
Q Consensus       298 ~~~~~~~~~~~l~-~~~~~~~i~~~d~~~~---~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~i~d~--~~~~  370 (515)
                      ..++|+|++++++ +...++.|.+|++...   +.+..+..+. ..+..++|+|+|++|++++. ++.+.+|++  .+++
T Consensus       243 ~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~  321 (347)
T 3hfq_A          243 AAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEG-DFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGK  321 (347)
T ss_dssp             EEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSS-SCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCC
T ss_pred             eeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCC-CCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCe
Confidence            8899999999875 4556899999998732   4445555433 56789999999998888765 489999954  4555


Q ss_pred             ee
Q psy17610        371 PC  372 (515)
Q Consensus       371 ~~  372 (515)
                      ..
T Consensus       322 l~  323 (347)
T 3hfq_A          322 LS  323 (347)
T ss_dssp             EE
T ss_pred             EE
Confidence            43

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.94  E-value=7e-25  Score=196.27  Aligned_cols=255  Identities=16%  Similarity=0.122  Sum_probs=191.2

Q ss_pred             EeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccc-cCceEEEEEe
Q psy17610        184 GWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEH-TSSVSVIQIK  262 (515)
Q Consensus       184 ~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~-~~~v~~~~~~  262 (515)
                      ++.++.|++||+.+++.....  .|...+.+++|+|++++|++++ ++.|.+||+... .........+ ...+.+++|+
T Consensus        18 ~~~~~~i~~~d~~~~~~~~~~--~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~s   93 (297)
T 2ojh_A           18 GSMRSSIEIFNIRTRKMRVVW--QTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGD-PSPEKVDTGFATICNNDHGIS   93 (297)
T ss_dssp             CCCCEEEEEEETTTTEEEEEE--EESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSC-CSCEECCCTTCCCBCSCCEEC
T ss_pred             CCcceeEEEEeCCCCceeeec--cCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCC-CCceEeccccccccccceEEC
Confidence            456889999999998877544  5888999999999999999876 789999999640 2333344444 4678899999


Q ss_pred             cCCCEEEEEe--CCCcEEEEE--cccceEEEEEEcCccEEEEEEcCCCcEEE-EEECCCeEEEEeC--CCCceEEEEecC
Q psy17610        263 SDSKEAMSAS--TDGTCVLWD--LIKSTRLIIMILPSMIMSAAYHPSEVQLI-TCSTNKMIDYWET--CDGSIIRSLEGS  335 (515)
Q Consensus       263 ~~~~~l~~~~--~d~~i~iwd--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~i~~~d~--~~~~~~~~~~~~  335 (515)
                      |+++++++++  .++...+|.  ..+++ ...+.....+..++|+|+++.++ ++..++.+.+|++  .+++ ...+..+
T Consensus        94 pdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~-~~~~~~~  171 (297)
T 2ojh_A           94 PDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGV-ETRLTHG  171 (297)
T ss_dssp             TTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCC-EEECCCS
T ss_pred             CCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCc-ceEcccC
Confidence            9999999998  334555554  44444 34444555688899999999887 6778898888885  3333 3444443


Q ss_pred             CCccEEEEEEcCCCCEEEEEc-CCCeEEEEEcc-CCeeeeeccCCCCCeeEEEECCCCcEEEEEeCC-----------Cc
Q psy17610        336 DVAAVNCVDFVDDGKYFLTGG-ADQIVKMWMYR-EGVPCFVGIGHAASITKIKISPDKKVIVSVSAD-----------GG  402 (515)
Q Consensus       336 ~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----------g~  402 (515)
                      . ..+.+++|+|++++|++++ .++.+++|++. .+.....+..|...+..++|+|++++|++++.+           +.
T Consensus       172 ~-~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~  250 (297)
T 2ojh_A          172 E-GRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVR  250 (297)
T ss_dssp             S-SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEE
T ss_pred             C-CccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceE
Confidence            3 7889999999999887765 58899999986 556667777888899999999999999988776           56


Q ss_pred             EEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCC
Q psy17610        403 IFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNK  463 (515)
Q Consensus       403 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg  463 (515)
                      |.+||+...+..                  .......+...+..++|+|++++|++++.+.
T Consensus       251 l~~~d~~~~~~~------------------~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~  293 (297)
T 2ojh_A          251 VQLMDMDGGNVE------------------TLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP  293 (297)
T ss_dssp             EEEEETTSCSCE------------------EEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred             EEEEecCCCCce------------------eeeccCCCCcccccceECCCCCEEEEEEecc
Confidence            999998754310                  0111223456688899999999998887654

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.94  E-value=3.2e-23  Score=189.84  Aligned_cols=272  Identities=14%  Similarity=0.117  Sum_probs=187.2

Q ss_pred             CCeEEEEec--CCCceEEEecCCCCCCeEEEEEcCCCCEEEEecC---CCcEEEEEccCCceeeEEeeccccCceEEEEE
Q psy17610        187 DGFIRCFTP--QSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGG---EGQVRIWKLTRESQSLQCVLKEHTSSVSVIQI  261 (515)
Q Consensus       187 dg~i~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~  261 (515)
                      ++.|.+|++  ++++........+...+..++|+|+|+ |++++.   ++.|.+|++..........+..+...+..++|
T Consensus        15 ~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~   93 (347)
T 3hfq_A           15 SQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAV   93 (347)
T ss_dssp             CCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEE
T ss_pred             CCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEE
Confidence            455666655  456654422234556778899999999 555544   68999999965555555555667788899999


Q ss_pred             ecCCCEEEEEe-CCCcEEEEEcc---cceEEEEEEcC----------ccEEEEEEcCCCcEEEEEECCCeEEEEeCC-CC
Q psy17610        262 KSDSKEAMSAS-TDGTCVLWDLI---KSTRLIIMILP----------SMIMSAAYHPSEVQLITCSTNKMIDYWETC-DG  326 (515)
Q Consensus       262 ~~~~~~l~~~~-~d~~i~iwd~~---~~~~~~~~~~~----------~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~-~~  326 (515)
                      +|+++++++++ .++.+.+|++.   ..+.+..+...          ..+..++|+|+++.+++...++.+.+|++. ++
T Consensus        94 spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g  173 (347)
T 3hfq_A           94 DEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAG  173 (347)
T ss_dssp             ETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTS
T ss_pred             CCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCC
Confidence            99999988888 67899999996   22333333322          137889999999955555668899999998 45


Q ss_pred             ceE--EEEecCCCccEEEEEEcCCCCEEEE-EcCCCeEEEEEccC--Cee--eeeccCCC------CCeeEEEECCCCcE
Q psy17610        327 SII--RSLEGSDVAAVNCVDFVDDGKYFLT-GGADQIVKMWMYRE--GVP--CFVGIGHA------ASITKIKISPDKKV  393 (515)
Q Consensus       327 ~~~--~~~~~~~~~~i~~~~~~~~~~~l~~-~~~dg~i~i~d~~~--~~~--~~~~~~~~------~~i~~~~~~~~~~~  393 (515)
                      +..  ..+.......+..++|+|||+++++ ...++.+.+|++..  ++.  ...+....      ..+..++|+|||++
T Consensus       174 ~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~  253 (347)
T 3hfq_A          174 QLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHF  253 (347)
T ss_dssp             CEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCE
T ss_pred             cEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCE
Confidence            433  2233333346788999999996655 56788999999874  432  22222222      45889999999998


Q ss_pred             EE-EEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecC-CeEEEE--e
Q psy17610        394 IV-SVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTN-KMIDYW--E  469 (515)
Q Consensus       394 l~-~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-g~v~iw--d  469 (515)
                      |+ +...++.|.+|++.....       ..          .......+...+..++|+|||++|++++.+ +.|.+|  |
T Consensus       254 l~v~~~~~~~v~v~~~~~~g~-------~~----------~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d  316 (347)
T 3hfq_A          254 LYVSNRGYNTLAVFAVTADGH-------LT----------LIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD  316 (347)
T ss_dssp             EEEEEETTTEEEEEEECGGGC-------EE----------EEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred             EEEEeCCCCEEEEEEECCCCc-------EE----------EeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence            75 555689999999863210       00          000111123347789999999998888764 899999  5


Q ss_pred             cCCCeee
Q psy17610        470 TCDGSII  476 (515)
Q Consensus       470 ~~~~~~~  476 (515)
                      ..+|++.
T Consensus       317 ~~tg~l~  323 (347)
T 3hfq_A          317 LTSGKLS  323 (347)
T ss_dssp             TTTCCEE
T ss_pred             CCCCeEE
Confidence            5567654

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.94  E-value=2.5e-25  Score=224.36  Aligned_cols=318  Identities=8%  Similarity=-0.024  Sum_probs=221.8

Q ss_pred             EEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCcc---CeEEEEeCCCCcEEEEEec---------CCcEEEEeC
Q psy17610         86 SLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTS---AIYDLQFPVNFSSVFATCS---------KNDIRIWSV  153 (515)
Q Consensus        86 ~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~l~~~~~---------d~~i~iw~~  153 (515)
                      .++|+|+|+++++ +.|+.|++||+.+++. ..++.+|..   .+.+++|||||++|++++.         ++.|++||+
T Consensus        20 ~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~   97 (719)
T 1z68_A           20 FPNWISGQEYLHQ-SADNNIVLYNIETGQS-YTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDL   97 (719)
T ss_dssp             CCEESSSSEEEEE-CTTSCEEEEESSSCCE-EEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred             ccEECCCCeEEEE-cCCCCEEEEEcCCCcE-EEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEEC
Confidence            6799999965554 5699999999999754 444444443   4899999999999998876         689999999


Q ss_pred             CCCcee--EEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCe-----------------EE
Q psy17610        154 RTLNEL--LRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGV-----------------TA  214 (515)
Q Consensus       154 ~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v-----------------~~  214 (515)
                      .+++.+  ..+   ...+..++|+|||+.|+.+. ++.|++|++.+++.......++...+                 .+
T Consensus        98 ~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~  173 (719)
T 1z68_A           98 SNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYA  173 (719)
T ss_dssp             TTTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCC
T ss_pred             CCCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCccc
Confidence            988762  222   24578899999999999885 78999999999887654433443323                 48


Q ss_pred             EEEcCCCCEEEEecCCC----------------------------------cEEEEEccCCcee---eE---EeeccccC
Q psy17610        215 LAITQDGTRLLSGGGEG----------------------------------QVRIWKLTRESQS---LQ---CVLKEHTS  254 (515)
Q Consensus       215 ~~~~~~~~~l~~~~~d~----------------------------------~i~iw~~~~~~~~---~~---~~~~~~~~  254 (515)
                      ++|+|||++|++++.|.                                  .|++||+......   .+   ..+.+|..
T Consensus       174 ~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~  253 (719)
T 1z68_A          174 LWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDY  253 (719)
T ss_dssp             EEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCE
T ss_pred             EEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcc
Confidence            99999999999887552                                  7889998643321   11   12345778


Q ss_pred             ceEEEEEecCCCEEEEEeCC----CcEEEEE----cccceEEEEE-----EcCccEE-----EEEEcCCCcEEEE--EEC
Q psy17610        255 SVSVIQIKSDSKEAMSASTD----GTCVLWD----LIKSTRLIIM-----ILPSMIM-----SAAYHPSEVQLIT--CST  314 (515)
Q Consensus       255 ~v~~~~~~~~~~~l~~~~~d----~~i~iwd----~~~~~~~~~~-----~~~~~~~-----~~~~~~~~~~l~~--~~~  314 (515)
                      .+..++|+||++.+++....    ..|.+||    +.+++.....     .+...+.     .+.|+|+++.++.  ...
T Consensus       254 ~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~  333 (719)
T 1z68_A          254 YFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDK  333 (719)
T ss_dssp             EEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECT
T ss_pred             eEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEcc
Confidence            89999999998766664432    2488899    7776654333     1223344     7899999996654  334


Q ss_pred             CC--eEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCC-----CeEEEEEccC--Ce-eeeecc----CCCC
Q psy17610        315 NK--MIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGAD-----QIVKMWMYRE--GV-PCFVGI----GHAA  380 (515)
Q Consensus       315 ~~--~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~--~~-~~~~~~----~~~~  380 (515)
                      ++  .|.+||+.+++ ...+..+. ..+..+.++ +++.++..+.+     +..++|.+..  +. ....+.    +|..
T Consensus       334 ~g~~~l~~~~~~~~~-~~~lt~~~-~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~  410 (719)
T 1z68_A          334 DGYKHIHYIKDTVEN-AIQITSGK-WEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERC  410 (719)
T ss_dssp             TSCEEEEEESSCSTT-CEECSCSS-SCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTB
T ss_pred             CCceEEEEEECCCCc-eEecccCc-eEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCC
Confidence            44  67888887776 34444333 456677666 77776665554     7888888754  32 122222    3667


Q ss_pred             CeeEEEECCCCcEEEEE-eCC--CcEEEEeCCCCc
Q psy17610        381 SITKIKISPDKKVIVSV-SAD--GGIFLWTFPELE  412 (515)
Q Consensus       381 ~i~~~~~~~~~~~l~~~-~~d--g~i~iw~~~~~~  412 (515)
                      .+..+.|+|++++++.. +..  ..+.+||+.+.+
T Consensus       411 ~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~~g~  445 (719)
T 1z68_A          411 QYYTASFSDYAKYYALVCYGPGIPISTLHDGRTDQ  445 (719)
T ss_dssp             CBEEEEECGGGSSEEEEECCBSSCEEEEECSSSCC
T ss_pred             ceEEEEECCCCCEEEEEcCCCCCCeEEEEECCCCC
Confidence            78899999998877754 333  468889886543

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.93  E-value=4.9e-24  Score=195.61  Aligned_cols=277  Identities=9%  Similarity=-0.010  Sum_probs=196.7

Q ss_pred             EEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecC-eEEEEEEEeeCCCEEEE-EeCCCeEEEEecCCCceEEEecC
Q psy17610        129 DLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMN-MICACIVFTYDGKAILS-GWNDGFIRCFTPQSGKLKFIIPN  206 (515)
Q Consensus       129 ~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~-~~~dg~i~~~~~~~~~~~~~~~~  206 (515)
                      .+++++++..+++++.++.|.+||+.+++.+..+..+. ..+..++|+|+++++++ ...++.|.+||+.+++....+..
T Consensus         4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~   83 (349)
T 1jmx_B            4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL   83 (349)
T ss_dssp             CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred             cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc
Confidence            45788888888888899999999999998888877544 14678999999987654 45689999999999988777643


Q ss_pred             CC-----CCCeEEEEEcCCCCEEEEecCC------------CcEEEEEccCCce-eeEEeeccccCceEEEEEecCCCEE
Q psy17610        207 AH-----NRGVTALAITQDGTRLLSGGGE------------GQVRIWKLTRESQ-SLQCVLKEHTSSVSVIQIKSDSKEA  268 (515)
Q Consensus       207 ~~-----~~~v~~~~~~~~~~~l~~~~~d------------~~i~iw~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l  268 (515)
                      .+     ...+..++|+|+|+++++++.+            +.|.+||+.+... ....... +...+.+++|+|+++ +
T Consensus        84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l  161 (349)
T 1jmx_B           84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-L  161 (349)
T ss_dssp             CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-E
T ss_pred             ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-E
Confidence            33     2347889999999999988865            8999999964321 2222222 334688899999999 6


Q ss_pred             EEEeCCCcEEEEEcccceEEEEEEcCc-------------------------cEEEEEEcCCCcEEEEEE-CCCeEEEEe
Q psy17610        269 MSASTDGTCVLWDLIKSTRLIIMILPS-------------------------MIMSAAYHPSEVQLITCS-TNKMIDYWE  322 (515)
Q Consensus       269 ~~~~~d~~i~iwd~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~l~~~~-~~~~i~~~d  322 (515)
                      ++++.  .|.+||+.+++....+....                         ....+++++++....... ....+..++
T Consensus       162 ~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  239 (349)
T 1jmx_B          162 YVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVD  239 (349)
T ss_dssp             EEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEE
T ss_pred             EEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEe
Confidence            66543  49999999988877665442                         334456665442111000 011122245


Q ss_pred             CCCCceEEEEecCCCccEEEEEEcC-CCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCC
Q psy17610        323 TCDGSIIRSLEGSDVAAVNCVDFVD-DGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADG  401 (515)
Q Consensus       323 ~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg  401 (515)
                      ..+++....-.......+..++++| ++++++++  ++.|.+||+.+++.+..+.. ...+.+++|+|++++|++++.++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~  316 (349)
T 1jmx_B          240 LKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANL-DHTYYCVAFDKKGDKLYLGGTFN  316 (349)
T ss_dssp             TTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEEECSSSSCEEEESBSS
T ss_pred             ccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcC-CCCccceEECCCCCEEEEecCCC
Confidence            5554432111111225778999999 99999988  88999999999988776653 34578999999999999888899


Q ss_pred             cEEEEeCCCCc
Q psy17610        402 GIFLWTFPELE  412 (515)
Q Consensus       402 ~i~iw~~~~~~  412 (515)
                      .|.+||+.+.+
T Consensus       317 ~v~v~d~~~~~  327 (349)
T 1jmx_B          317 DLAVFNPDTLE  327 (349)
T ss_dssp             EEEEEETTTTE
T ss_pred             eEEEEeccccc
Confidence            99999987653

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.93  E-value=5.8e-24  Score=214.25  Aligned_cols=369  Identities=12%  Similarity=0.068  Sum_probs=238.8

Q ss_pred             CcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccC-----eEEEEeCCCCcEEEEEecC---------Cc
Q psy17610         82 SGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSA-----IYDLQFPVNFSSVFATCSK---------ND  147 (515)
Q Consensus        82 ~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~-----v~~~~~~~~~~~l~~~~~d---------~~  147 (515)
                      ....+++|+|||++++++  |+.|++||+.+++.. .++.+|...     ...++|||||++|+.++.+         +.
T Consensus        17 ~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~   93 (740)
T 4a5s_A           17 LKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSS-VFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTAS   93 (740)
T ss_dssp             CCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEE-EEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEE
T ss_pred             ccccccEECCCCcEEEEc--CCcEEEEECCCCceE-EEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceE
Confidence            345588999999988886  899999999997654 445556533     2447889999999998875         55


Q ss_pred             EEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCe---------------
Q psy17610        148 IRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGV---------------  212 (515)
Q Consensus       148 i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v---------------  212 (515)
                      +.+||+.+++.. .+..+...+...+|||||+.|+.+. ++.|++|++.+++.......++...+               
T Consensus        94 ~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~  171 (740)
T 4a5s_A           94 YDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFS  171 (740)
T ss_dssp             EEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSS
T ss_pred             EEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcC
Confidence            679999988754 3555666789999999999999884 68999999998886654433443323               


Q ss_pred             --EEEEEcCCCCEEEEecCCC-cEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEccc---c-
Q psy17610        213 --TALAITQDGTRLLSGGGEG-QVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIK---S-  285 (515)
Q Consensus       213 --~~~~~~~~~~~l~~~~~d~-~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~---~-  285 (515)
                        ..+.|+|||+.|+.++.|. .+.+|++......     ..+...+..+.+.+.|..    ....+|.+||+.+   + 
T Consensus       172 ~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~-----~~~~~~~~~~~yp~~G~~----~~~~~l~v~d~~~~~~~~  242 (740)
T 4a5s_A          172 AYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDE-----SLQYPKTVRVPYPKAGAV----NPTVKFFVVNTDSLSSVT  242 (740)
T ss_dssp             SSBCEEECTTSSEEEEEEEECTTCCEEEEEECCST-----TCSSCEEEEEECCBTTSC----CCEEEEEEEETTSCCSSS
T ss_pred             CCcceEECCCCCEEEEEEEcccCCceEEEEeecCC-----CCCCCcceeecCCCCcCc----CCeeEEEEEECCCCCCCC
Confidence              3589999999999887554 4888876321111     024445666777666643    1223689999988   7 


Q ss_pred             --eEEEEEE------cCccEEEEEEcCCCcEEEEEEC----CCeEEEEeCCCCc----e--EEEE-ecCCCccE-----E
Q psy17610        286 --TRLIIMI------LPSMIMSAAYHPSEVQLITCST----NKMIDYWETCDGS----I--IRSL-EGSDVAAV-----N  341 (515)
Q Consensus       286 --~~~~~~~------~~~~~~~~~~~~~~~~l~~~~~----~~~i~~~d~~~~~----~--~~~~-~~~~~~~i-----~  341 (515)
                        +......      ....+..++|+||++.++....    +..|.+||+.+++    +  +..+ ...+...+     .
T Consensus       243 ~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~  322 (740)
T 4a5s_A          243 NATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPS  322 (740)
T ss_dssp             CCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCC
T ss_pred             cceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCC
Confidence              3333222      3345889999999997766543    2379999998887    1  1111 11121333     3


Q ss_pred             EEEEcCCCCEEE-EEcC-C--CeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCC-----CcEEEEeCCCCc
Q psy17610        342 CVDFVDDGKYFL-TGGA-D--QIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSAD-----GGIFLWTFPELE  412 (515)
Q Consensus       342 ~~~~~~~~~~l~-~~~~-d--g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~iw~~~~~~  412 (515)
                      ...|+|||+.++ ..+. +  ..|++||..+++... +......+..+.. +|++.|+..+..     +...||.+....
T Consensus       323 ~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~-lT~g~~~v~~~~~-~d~~~i~f~~~~~~~~~~~~~ly~v~~~g  400 (740)
T 4a5s_A          323 EPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTF-ITKGTWEVIGIEA-LTSDYLYYISNEYKGMPGGRNLYKIQLID  400 (740)
T ss_dssp             CCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEE-SCCSSSCEEEEEE-ECSSEEEEEESCGGGCTTCBEEEEEETTE
T ss_pred             CceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEe-cccCCEEEEEEEE-EeCCEEEEEEecCCCCCceeEEEEEECCC
Confidence            678999999877 5543 3  368888987765543 3344555665542 345555544332     445666543221


Q ss_pred             CccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecC---CeEEEEecCCCeeeeeec
Q psy17610        413 DDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTN---KMIDYWETCDGSIIRSLE  480 (515)
Q Consensus       413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---g~v~iwd~~~~~~~~~~~  480 (515)
                      ....      .....        .............|||++++++.....   ..+.+++..+++.+..+.
T Consensus       401 ~~~~------~~lt~--------~~~~~~~~~~~~~~S~dg~~~~~~~s~~~~p~~~l~~~~~~~~~~~l~  457 (740)
T 4a5s_A          401 YTKV------TCLSC--------ELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVLE  457 (740)
T ss_dssp             EEEE------EESST--------TTSTTTBCBEEEEECTTSSEEEEEECSBSSCEEEEEETTTTEEEEEEE
T ss_pred             CCcc------eeecc--------ccCCCCCceEEEEECCCCCEEEEEeCCCCCCEEEEEECCCCcEEEEec
Confidence            0000      00000        000112447788999999987755433   468888988777655543

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.93  E-value=1.1e-23  Score=193.27  Aligned_cols=274  Identities=12%  Similarity=0.094  Sum_probs=197.7

Q ss_pred             EEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEe-cCCcEEEEeCCCCceeEEEEe
Q psy17610         86 SLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATC-SKNDIRIWSVRTLNELLRISV  164 (515)
Q Consensus        86 ~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-~d~~i~iw~~~~~~~~~~~~~  164 (515)
                      .+++++++.++++++.++.|.+||..+++.+..+..+....+..++|+|+++.+++++ .++.|.+||+.+++.+..+..
T Consensus         4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~   83 (349)
T 1jmx_B            4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL   83 (349)
T ss_dssp             CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred             cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc
Confidence            4578888999999999999999999997555444332323578999999998776655 588999999999988877763


Q ss_pred             cC------eEEEEEEEeeCCCEEEEEeCC------------CeEEEEecCCCce---EEEecCCCCCCeEEEEEcCCCCE
Q psy17610        165 MN------MICACIVFTYDGKAILSGWND------------GFIRCFTPQSGKL---KFIIPNAHNRGVTALAITQDGTR  223 (515)
Q Consensus       165 ~~------~~v~~~~~~~~~~~l~~~~~d------------g~i~~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~  223 (515)
                      ..      ..+..++|+|+|+++++++.+            +.|.+||+.+++.   ....  .+...+.+++|+|+|+ 
T Consensus        84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~~~~~~~~~~s~dg~-  160 (349)
T 1jmx_B           84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTF--PMPRQVYLMRAADDGS-  160 (349)
T ss_dssp             CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEE--ECCSSCCCEEECTTSC-
T ss_pred             ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeec--cCCCcccceeECCCCc-
Confidence            32      236789999999999998865            8999999988543   2233  2334688999999999 


Q ss_pred             EEEecCCCcEEEEEccCCceeeEEeecccc--C----------------------ceEEEEEecCCCE-----------E
Q psy17610        224 LLSGGGEGQVRIWKLTRESQSLQCVLKEHT--S----------------------SVSVIQIKSDSKE-----------A  268 (515)
Q Consensus       224 l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~--~----------------------~v~~~~~~~~~~~-----------l  268 (515)
                      +++++.  .|.+||+.+..  ....+..+.  .                      ....+++++++..           +
T Consensus       161 l~~~~~--~i~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~  236 (349)
T 1jmx_B          161 LYVAGP--DIYKMDVKTGK--YTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYL  236 (349)
T ss_dssp             EEEESS--SEEEECTTTCC--EEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEE
T ss_pred             EEEccC--cEEEEeCCCCc--eeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEE
Confidence            555544  49999985433  333333221  0                      2334555544321           1


Q ss_pred             EEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcC-CCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcC
Q psy17610        269 MSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHP-SEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVD  347 (515)
Q Consensus       269 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~  347 (515)
                      .....++.+.+|++.        .....+..++++| ++++++++  ++.|.+||+.+++.+..+...  ..+.+++|+|
T Consensus       237 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~--~~~~~~~~s~  304 (349)
T 1jmx_B          237 SVDLKTGKTHTQEFA--------DLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLD--HTYYCVAFDK  304 (349)
T ss_dssp             EEETTTCCEEEEEEE--------ECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECS--SCCCEEEECS
T ss_pred             EEeccCCcEEecccc--------cCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCC--CCccceEECC
Confidence            122233445555442        1345688999999 99999888  889999999999988888754  4567899999


Q ss_pred             CCCEEEEEcCCCeEEEEEccCCeeeeeccCC
Q psy17610        348 DGKYFLTGGADQIVKMWMYREGVPCFVGIGH  378 (515)
Q Consensus       348 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~  378 (515)
                      +|++|++++.++.|.+||..+++.+..+...
T Consensus       305 dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~~  335 (349)
T 1jmx_B          305 KGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP  335 (349)
T ss_dssp             SSSCEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred             CCCEEEEecCCCeEEEEeccccceeeeeecC
Confidence            9998888888999999999998887776443

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.93  E-value=5.4e-23  Score=189.43  Aligned_cols=296  Identities=15%  Similarity=0.187  Sum_probs=199.8

Q ss_pred             CCEEEEEe----CCCeEEEEec--CCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCC----CcEEEEEccCCce--ee
Q psy17610        178 GKAILSGW----NDGFIRCFTP--QSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGE----GQVRIWKLTRESQ--SL  245 (515)
Q Consensus       178 ~~~l~~~~----~dg~i~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~iw~~~~~~~--~~  245 (515)
                      ..++++|+    .++.|.+|.+  ++++....... +...+..++|+|+|++|++++.+    +.|.+|+++..+.  ..
T Consensus        13 ~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~   91 (361)
T 3scy_A           13 ELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA-EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHL   91 (361)
T ss_dssp             EEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE-ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEE
T ss_pred             ceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc-cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEE
Confidence            34555664    3567888866  55665443323 66778889999999999988875    7999999875322  33


Q ss_pred             EEeeccccCceEEEEEecCCCEEEEEe-CCCcEEEEEcccceEEE----EEEc-----------CccEEEEEEcCCCcEE
Q psy17610        246 QCVLKEHTSSVSVIQIKSDSKEAMSAS-TDGTCVLWDLIKSTRLI----IMIL-----------PSMIMSAAYHPSEVQL  309 (515)
Q Consensus       246 ~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~----~~~~-----------~~~~~~~~~~~~~~~l  309 (515)
                      ......+......+++  +++++++++ .++.+.+|++.....+.    ....           ...+.+++|+|+++++
T Consensus        92 ~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l  169 (361)
T 3scy_A           92 LNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYL  169 (361)
T ss_dssp             EEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEE
T ss_pred             eeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEE
Confidence            3344445556677777  788777776 57899999987533221    1111           1135789999999977


Q ss_pred             EEEEC-CCeEEEEeCCCCce------E------EEEecCCCccEEEEEEcCCCCEEEEEc-CCCeEEEEEccCCee--ee
Q psy17610        310 ITCST-NKMIDYWETCDGSI------I------RSLEGSDVAAVNCVDFVDDGKYFLTGG-ADQIVKMWMYREGVP--CF  373 (515)
Q Consensus       310 ~~~~~-~~~i~~~d~~~~~~------~------~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~--~~  373 (515)
                      +++.. ++.+.+|++.....      +      ..........+..++|+|+|+++++++ .++.|.+|++.+++.  +.
T Consensus       170 ~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~  249 (361)
T 3scy_A          170 LADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQ  249 (361)
T ss_dssp             EEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEE
T ss_pred             EEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeE
Confidence            76654 78999998775431      1      233333336678999999999887776 689999999987644  22


Q ss_pred             e---ccCCCCCeeEEEECCCCcEEEEEeCC--CcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEee
Q psy17610        374 V---GIGHAASITKIKISPDKKVIVSVSAD--GGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAA  448 (515)
Q Consensus       374 ~---~~~~~~~i~~~~~~~~~~~l~~~~~d--g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  448 (515)
                      .   ...+......++|+||+++|+++..+  +.|.+|++.........                ...... ...+..++
T Consensus       250 ~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~----------------~~~~~~-g~~~~~~~  312 (361)
T 3scy_A          250 TVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTK----------------VGYQLT-GIHPRNFI  312 (361)
T ss_dssp             EEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEE----------------EEEEEC-SSCCCEEE
T ss_pred             EEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEE----------------eeEecC-CCCCceEE
Confidence            2   23344557899999999998776654  89999998632110000                000001 23467899


Q ss_pred             eccCCcEEEEee-cCCeEEEE--ecCCCeeeeeecccccceEEEEEEc
Q psy17610        449 YHPSEVQLITCS-TNKMIDYW--ETCDGSIIRSLEGSDVAAVNCVDFV  493 (515)
Q Consensus       449 ~s~~~~~l~~~~-~dg~v~iw--d~~~~~~~~~~~~~~~~~v~~~~~s  493 (515)
                      |+|+|++|++++ .++.|.+|  |..++++.......+...+.|+.|.
T Consensus       313 ~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~  360 (361)
T 3scy_A          313 ITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV  360 (361)
T ss_dssp             ECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred             ECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence            999999998887 67889996  5557776655433333678898886

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.93  E-value=6.8e-23  Score=188.75  Aligned_cols=294  Identities=14%  Similarity=0.134  Sum_probs=199.9

Q ss_pred             ecCCCEEEEEec----CceEEEEEC--CCCceeEEeeccCccCeEEEEeCCCCcEEEEEecC----CcEEEEeCCC--Cc
Q psy17610         90 NPVNNKVFVGTV----NCEIFLIDM--NSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSK----NDIRIWSVRT--LN  157 (515)
Q Consensus        90 s~~~~~l~~~~~----d~~i~iw~~--~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d----~~i~iw~~~~--~~  157 (515)
                      .+...++++|+.    ++.|.+|++  +++........ +......++|+||+++|++++.+    +.|.+|+++.  ++
T Consensus        10 ~~~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~   88 (361)
T 3scy_A           10 TDSELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA-EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGT   88 (361)
T ss_dssp             GGGEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE-ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTE
T ss_pred             CCCceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc-cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCc
Confidence            344456666643    467888876  44433333222 67778889999999999999885    7999999875  33


Q ss_pred             e--eEEEEecCeEEEEEEEeeCCCEEEEEe-CCCeEEEEecCCCceEEEe----c---------CCCCCCeEEEEEcCCC
Q psy17610        158 E--LLRISVMNMICACIVFTYDGKAILSGW-NDGFIRCFTPQSGKLKFII----P---------NAHNRGVTALAITQDG  221 (515)
Q Consensus       158 ~--~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~~~~~~~~~~~~----~---------~~~~~~v~~~~~~~~~  221 (515)
                      .  +.....+......+++  ++++|++++ .++.+.+|++.....+...    .         ..+...+.+++|+|+|
T Consensus        89 ~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg  166 (361)
T 3scy_A           89 LHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDG  166 (361)
T ss_dssp             EEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTS
T ss_pred             EEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCC
Confidence            2  2233334445566776  888777776 5789999999754322111    0         1123346889999999


Q ss_pred             CEEEEec-CCCcEEEEEccCCce----e-e------EEeeccccCceEEEEEecCCCEEEEEe-CCCcEEEEEcccceEE
Q psy17610        222 TRLLSGG-GEGQVRIWKLTRESQ----S-L------QCVLKEHTSSVSVIQIKSDSKEAMSAS-TDGTCVLWDLIKSTRL  288 (515)
Q Consensus       222 ~~l~~~~-~d~~i~iw~~~~~~~----~-~------~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~  288 (515)
                      +++++++ .++.|.+|++.....    . +      ......+......++|+|+++++++++ .++.|.+|++.+++..
T Consensus       167 ~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~  246 (361)
T 3scy_A          167 KYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLD  246 (361)
T ss_dssp             SEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEE
T ss_pred             CEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceE
Confidence            9766554 578999999875442    1 1      112223445678899999999888777 5899999999876543


Q ss_pred             E--EEEcC----ccEEEEEEcCCCcEEEEEECC--CeEEEEeCC--CCc--eEEEEecCCCccEEEEEEcCCCCEEEEEc
Q psy17610        289 I--IMILP----SMIMSAAYHPSEVQLITCSTN--KMIDYWETC--DGS--IIRSLEGSDVAAVNCVDFVDDGKYFLTGG  356 (515)
Q Consensus       289 ~--~~~~~----~~~~~~~~~~~~~~l~~~~~~--~~i~~~d~~--~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~  356 (515)
                      .  .+...    .....++|+|++++|+++..+  +.|.+|++.  +++  .+..+..  ...+..++|+|+|++|++++
T Consensus       247 ~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~--g~~~~~~~~spdg~~l~~~~  324 (361)
T 3scy_A          247 EIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT--GIHPRNFIITPNGKYLLVAC  324 (361)
T ss_dssp             EEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC--SSCCCEEEECTTSCEEEEEE
T ss_pred             EeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC--CCCCceEEECCCCCEEEEEE
Confidence            2  22221    236799999999999777665  899999985  444  3444444  25678999999999888877


Q ss_pred             -CCCeEEEEEc--cCCeeeeec-cCCCCCeeEEEEC
Q psy17610        357 -ADQIVKMWMY--REGVPCFVG-IGHAASITKIKIS  388 (515)
Q Consensus       357 -~dg~i~i~d~--~~~~~~~~~-~~~~~~i~~~~~~  388 (515)
                       .++.|.+|++  .+++..... ..+...+.|+.|.
T Consensus       325 ~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~  360 (361)
T 3scy_A          325 RDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV  360 (361)
T ss_dssp             TTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred             CCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence             6789999654  466655443 2244568888875

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.93  E-value=1.1e-24  Score=219.68  Aligned_cols=333  Identities=8%  Similarity=0.001  Sum_probs=224.7

Q ss_pred             EEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCe---EEEEEEEeeCCCEEEEEeC---------CCeEEEEec
Q psy17610        128 YDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNM---ICACIVFTYDGKAILSGWN---------DGFIRCFTP  195 (515)
Q Consensus       128 ~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~---------dg~i~~~~~  195 (515)
                      .+++|+|+| .+++.+.|++|++||+.+++....+..+..   .+.+++|+|||++|++++.         ++.|++||+
T Consensus        19 ~~~~~s~dg-~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~   97 (719)
T 1z68_A           19 FFPNWISGQ-EYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDL   97 (719)
T ss_dssp             CCCEESSSS-EEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred             CccEECCCC-eEEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEEC
Confidence            378999999 456666799999999999987766655433   3789999999999998876         689999999


Q ss_pred             CCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCce-----------------EE
Q psy17610        196 QSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSV-----------------SV  258 (515)
Q Consensus       196 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v-----------------~~  258 (515)
                      .+++.....  .....+..++|+|||+.|+.+. ++.|++|++.......+ ...++...+                 ..
T Consensus        98 ~~g~~~~~~--~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l-~~~~~~~~v~~g~~~~v~~ee~~~~~~~  173 (719)
T 1z68_A           98 SNGEFVRGN--ELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQI-TFNGRENKIFNGIPDWVYEEEMLATKYA  173 (719)
T ss_dssp             TTTEECCSS--CCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEEC-CCCCBTTTEEESSCCHHHHHHTTCSSCC
T ss_pred             CCCccccce--ecCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEE-ecCCCcCCeEcccccceeeeecccCccc
Confidence            998763111  1125688999999999999885 68999999964432211 112222222                 48


Q ss_pred             EEEecCCCEEEEEeCCC----------------------------------cEEEEEcccceEE--EEE-------EcCc
Q psy17610        259 IQIKSDSKEAMSASTDG----------------------------------TCVLWDLIKSTRL--IIM-------ILPS  295 (515)
Q Consensus       259 ~~~~~~~~~l~~~~~d~----------------------------------~i~iwd~~~~~~~--~~~-------~~~~  295 (515)
                      ++|+|||++|++++.|.                                  .|++||+.+++..  ..+       .+..
T Consensus       174 ~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~  253 (719)
T 1z68_A          174 LWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDY  253 (719)
T ss_dssp             EEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCE
T ss_pred             EEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcc
Confidence            99999999999987652                                  7889999887642  111       1234


Q ss_pred             cEEEEEEcCCCcEEEEEECC----CeEEEEe----CCCCceEEEEe---cCCCccEE-----EEEEcCCCCEEEE--EcC
Q psy17610        296 MIMSAAYHPSEVQLITCSTN----KMIDYWE----TCDGSIIRSLE---GSDVAAVN-----CVDFVDDGKYFLT--GGA  357 (515)
Q Consensus       296 ~~~~~~~~~~~~~l~~~~~~----~~i~~~d----~~~~~~~~~~~---~~~~~~i~-----~~~~~~~~~~l~~--~~~  357 (515)
                      .+..++|+||++.+++....    ..|.+||    ..+++....+.   ..+...+.     .+.|+|||+.++.  ...
T Consensus       254 ~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~  333 (719)
T 1z68_A          254 YFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDK  333 (719)
T ss_dssp             EEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECT
T ss_pred             eEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEcc
Confidence            68899999998776664432    3488899    77776544332   22224454     7899999996554  445


Q ss_pred             CC--eEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCC-----CcEEEEeCCCCcCccCCCcccceeeecccc
Q psy17610        358 DQ--IVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSAD-----GGIFLWTFPELEDDVGDSRSLSSKISRSTA  430 (515)
Q Consensus       358 dg--~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~  430 (515)
                      +|  .|.+||+.+++ ...+..+...+..+.++ +++.|+..+.+     +..++|.+........ ...+    .    
T Consensus       334 ~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~-~~~l----~----  402 (719)
T 1z68_A          334 DGYKHIHYIKDTVEN-AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPS-KKCV----T----  402 (719)
T ss_dssp             TSCEEEEEESSCSTT-CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCC-EEES----S----
T ss_pred             CCceEEEEEECCCCc-eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCC-ceec----c----
Confidence            55  57777876665 44555666678887777 77777766655     7889998754210000 0000    0    


Q ss_pred             cccceeeecCcccEEEeeeccCCcEEEEee-cC--CeEEEEecCCCeeeeeec
Q psy17610        431 RSTRLIIMILPSMIMSAAYHPSEVQLITCS-TN--KMIDYWETCDGSIIRSLE  480 (515)
Q Consensus       431 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~d--g~v~iwd~~~~~~~~~~~  480 (515)
                          ..+..+...+..+.|+|++++++... ..  ..+++||+.+++.+..+.
T Consensus       403 ----~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~~g~~~~~~~  451 (719)
T 1z68_A          403 ----CHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGRTDQEIKILE  451 (719)
T ss_dssp             ----TTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSSSCCEEEEEE
T ss_pred             ----CccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECCCCCEEEEee
Confidence                00011234467889999998877543 22  468899998887654443

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.93  E-value=3.9e-24  Score=210.03  Aligned_cols=271  Identities=9%  Similarity=0.010  Sum_probs=203.8

Q ss_pred             CeEEEEEEEeeCCCEEEEEeC-CCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecC---CCcEEEEEccC-
Q psy17610        166 NMICACIVFTYDGKAILSGWN-DGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGG---EGQVRIWKLTR-  240 (515)
Q Consensus       166 ~~~v~~~~~~~~~~~l~~~~~-dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~iw~~~~-  240 (515)
                      ..+|.+++|+|||++|++++. +|.+.+|++++++..... ..+...+..++|+|+ +.+++++.   +....+|.++. 
T Consensus        21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt-~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~   98 (582)
T 3o4h_A           21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLN-REPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTS   98 (582)
T ss_dssp             HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECC-SSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETT
T ss_pred             ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeee-cccccccccccCCCC-eEEEEeccCCCCcceEEEEEecc
Confidence            346899999999999998887 999999999776655433 334368999999999 67776654   45667776643 


Q ss_pred             -CceeeEEeeccccCceEEEEEecCCCE-EEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECC---
Q psy17610        241 -ESQSLQCVLKEHTSSVSVIQIKSDSKE-AMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTN---  315 (515)
Q Consensus       241 -~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---  315 (515)
                       .....  .+... ..+...+|+|+++. +++.+.++.+.+||+.+++.......+.  .+++|+|||+.++.++.+   
T Consensus        99 ~~g~~~--~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~  173 (582)
T 3o4h_A           99 RPGEEQ--RLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGG  173 (582)
T ss_dssp             STTCCE--ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETT
T ss_pred             CCCccc--cccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCC
Confidence             22222  22222 23446688888864 3344445566699999988776666555  789999999999988776   


Q ss_pred             -CeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCC--eEEEEEccCCeeeeeccCCCCCeeEEE------
Q psy17610        316 -KMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQ--IVKMWMYREGVPCFVGIGHAASITKIK------  386 (515)
Q Consensus       316 -~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~i~~~~------  386 (515)
                       ..|++||+.+++.. .+..+. ..+..++|+|||+.|+++..++  .|++||+.+++.. .+.+|...+..++      
T Consensus       174 ~~~i~~~d~~~g~~~-~l~~~~-~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~  250 (582)
T 3o4h_A          174 RVSLFTSNLSSGGLR-VFDSGE-GSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITW  250 (582)
T ss_dssp             EEEEEEEETTTCCCE-EECCSS-CEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEE
T ss_pred             CeEEEEEcCCCCCce-EeecCC-CccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccc
Confidence             78999999888765 454444 7789999999999999888888  8999999988877 7778887777777      


Q ss_pred             --ECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCe
Q psy17610        387 --ISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKM  464 (515)
Q Consensus       387 --~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~  464 (515)
                        |+|||.++++++.++.+++|++  ++...                       .....+..++|+ +++++++++.+..
T Consensus       251 ~~~spdg~~~~~~~~~g~~~l~~~--g~~~~-----------------------~~~~~v~~~~~s-dg~~l~~~s~~~~  304 (582)
T 3o4h_A          251 LGYLPDGRLAVVARREGRSAVFID--GERVE-----------------------APQGNHGRVVLW-RGKLVTSHTSLST  304 (582)
T ss_dssp             EEECTTSCEEEEEEETTEEEEEET--TEEEC-----------------------CCSSEEEEEEEE-TTEEEEEEEETTE
T ss_pred             eeEcCCCcEEEEEEcCCcEEEEEE--CCeec-----------------------cCCCceEEEEec-CCEEEEEEcCCCC
Confidence              9999999999999999999998  21100                       011347789999 9999998887744


Q ss_pred             ---EEEEecCC
Q psy17610        465 ---IDYWETCD  472 (515)
Q Consensus       465 ---v~iwd~~~  472 (515)
                         +++||..+
T Consensus       305 p~~l~~~d~~~  315 (582)
T 3o4h_A          305 PPRIVSLPSGE  315 (582)
T ss_dssp             EEEEEEETTCC
T ss_pred             CCeEEEEcCCC
Confidence               77777654

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.92  E-value=6.8e-24  Score=208.31  Aligned_cols=270  Identities=11%  Similarity=0.060  Sum_probs=198.7

Q ss_pred             CccCeEEEEeCCCCcEEEEEec-CCcEEEEeCCCCceeEEEEecC-eEEEEEEEeeCCCEEEEEeC---CCeEEEEecCC
Q psy17610        123 HTSAIYDLQFPVNFSSVFATCS-KNDIRIWSVRTLNELLRISVMN-MICACIVFTYDGKAILSGWN---DGFIRCFTPQS  197 (515)
Q Consensus       123 h~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~---dg~i~~~~~~~  197 (515)
                      +..+|.+++|+|||+.|++++. |++++||++++++ ..++..+. ..+..++|+|| +.+++++.   +....+|.+..
T Consensus        20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~-~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~   97 (582)
T 3o4h_A           20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGE-TVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNT   97 (582)
T ss_dssp             HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTE-EEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEET
T ss_pred             hccchheeecCCCCCeEEEEEccCCceeEEEEcCCC-cEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEec
Confidence            4568999999999999999887 9999999996554 45555555 58899999999 77776664   44455554432


Q ss_pred             ---CceEEEecCCCCCCeEEEEEcCCCCE-EEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeC
Q psy17610        198 ---GKLKFIIPNAHNRGVTALAITQDGTR-LLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST  273 (515)
Q Consensus       198 ---~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  273 (515)
                         +... .+.  ....+...+|+|+++. +++.+.++.+.+||+.+.....  ... +..  .+++|+|||+++++++.
T Consensus        98 ~~~g~~~-~l~--~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~--l~~-~~~--~~~~~spDG~~la~~~~  169 (582)
T 3o4h_A           98 SRPGEEQ-RLE--AVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRE--LAR-LPG--FGFVSDIRGDLIAGLGF  169 (582)
T ss_dssp             TSTTCCE-ECT--TSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEE--EEE-ESS--CEEEEEEETTEEEEEEE
T ss_pred             cCCCccc-ccc--CCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEE--eec-CCC--ceEEECCCCCEEEEEEE
Confidence               2323 332  2223446688887753 3333344556699996543222  222 222  78999999999998887


Q ss_pred             C----CcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCC--eEEEEeCCCCceEEEEecCCCccEEEEE---
Q psy17610        274 D----GTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNK--MIDYWETCDGSIIRSLEGSDVAAVNCVD---  344 (515)
Q Consensus       274 d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~i~~~d~~~~~~~~~~~~~~~~~i~~~~---  344 (515)
                      +    +.|++||+.+++..........+..++|+|||+.|+++..++  .|++||+.+++.. .+..+. ..+..++   
T Consensus       170 ~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~-~~~~~~~~~~  247 (582)
T 3o4h_A          170 FGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPS-KDFSSYRPTA  247 (582)
T ss_dssp             EETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSC-SHHHHHCCSE
T ss_pred             cCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCC-cChhhhhhcc
Confidence            7    789999998888765555666789999999999999888888  8999999998877 444433 4555566   


Q ss_pred             -----EcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCc---EEEEeCCC
Q psy17610        345 -----FVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGG---IFLWTFPE  410 (515)
Q Consensus       345 -----~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~---i~iw~~~~  410 (515)
                           |+|||.++++++.++.+++|++  ++...   .+...+.+++|+ +++++++++.+..   +.+|+...
T Consensus       248 ~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~---~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~~  315 (582)
T 3o4h_A          248 ITWLGYLPDGRLAVVARREGRSAVFID--GERVE---APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSGE  315 (582)
T ss_dssp             EEEEEECTTSCEEEEEEETTEEEEEET--TEEEC---CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC
T ss_pred             ccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec---cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCCC
Confidence                 9999999999999999999999  66554   344678999999 9999998887744   66776543

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.92  E-value=1.1e-22  Score=204.95  Aligned_cols=345  Identities=10%  Similarity=0.043  Sum_probs=221.4

Q ss_pred             cCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeE-----EEEEEEeeCCCEEEEEeCC---------CeE
Q psy17610        125 SAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMI-----CACIVFTYDGKAILSGWND---------GFI  190 (515)
Q Consensus       125 ~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l~~~~~d---------g~i  190 (515)
                      ....+++|+||++++++.  |++|++||+.+++....+..+...     ...+.|||||++|+.++.+         +.+
T Consensus        17 ~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~   94 (740)
T 4a5s_A           17 LKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASY   94 (740)
T ss_dssp             CCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEE
T ss_pred             ccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEE
Confidence            346689999999777765  999999999999987777665432     2347899999999998875         567


Q ss_pred             EEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCce--------------
Q psy17610        191 RCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSV--------------  256 (515)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v--------------  256 (515)
                      .+||+.+++... + ..|...+...+|+|||+.|+.+. ++.|++|++....... .+..++...+              
T Consensus        95 ~~~d~~~~~~~~-l-~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~-lt~~g~~~~~~~g~~~~v~~ee~~  170 (740)
T 4a5s_A           95 DIYDLNKRQLIT-E-ERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYR-ITWTGKEDIIYNGITDWVYEEEVF  170 (740)
T ss_dssp             EEEETTTTEECC-S-SCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEE-CCSCCBTTTEEESBCCHHHHHHTS
T ss_pred             EEEECCCCcEEE-c-ccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEE-EcCCCCccceecCcccccccchhc
Confidence            799999998653 3 46778899999999999999884 6899999986443221 1222332222              


Q ss_pred             ---EEEEEecCCCEEEEEeCCCc-EEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCC---Cc--
Q psy17610        257 ---SVIQIKSDSKEAMSASTDGT-CVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCD---GS--  327 (515)
Q Consensus       257 ---~~~~~~~~~~~l~~~~~d~~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~---~~--  327 (515)
                         ..+.|+|||+.|+.++.|.+ +.+|++.......  ........+.+.+.|..    .....|++||+.+   ++  
T Consensus       171 ~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~--~~~~~~~~~~yp~~G~~----~~~~~l~v~d~~~~~~~~~~  244 (740)
T 4a5s_A          171 SAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDES--LQYPKTVRVPYPKAGAV----NPTVKFFVVNTDSLSSVTNA  244 (740)
T ss_dssp             SSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTT--CSSCEEEEEECCBTTSC----CCEEEEEEEETTSCCSSSCC
T ss_pred             CCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCC--CCCCcceeecCCCCcCc----CCeeEEEEEECCCCCCCCcc
Confidence               35899999999998876544 8888763211000  11223455566555532    1223689999998   73  


Q ss_pred             eEEEEec-----CCCccEEEEEEcCCCCEEEEEcC----CCeEEEEEccCCe----ee--eec--cCCCCCee-----EE
Q psy17610        328 IIRSLEG-----SDVAAVNCVDFVDDGKYFLTGGA----DQIVKMWMYREGV----PC--FVG--IGHAASIT-----KI  385 (515)
Q Consensus       328 ~~~~~~~-----~~~~~i~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~~----~~--~~~--~~~~~~i~-----~~  385 (515)
                      ....+..     .+...+..++|+|||+.++....    +..|.+||+.+++    +.  ..+  ..|...+.     ..
T Consensus       245 ~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p  324 (740)
T 4a5s_A          245 TSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEP  324 (740)
T ss_dssp             CEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCC
T ss_pred             eEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCc
Confidence            2334433     13367899999999997665432    3479999998886    22  112  34555554     78


Q ss_pred             EECCCCcEEE-EEeC-CC--cEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeec
Q psy17610        386 KISPDKKVIV-SVSA-DG--GIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCST  461 (515)
Q Consensus       386 ~~~~~~~~l~-~~~~-dg--~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~  461 (515)
                      +|+|||+.|+ ..+. +|  .|.+|++.......     +                ......+..+. .+|++.|+..+.
T Consensus       325 ~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~-----l----------------T~g~~~v~~~~-~~d~~~i~f~~~  382 (740)
T 4a5s_A          325 HFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTF-----I----------------TKGTWEVIGIE-ALTSDYLYYISN  382 (740)
T ss_dssp             EECTTSSEEEEEEECTTSCEEEEEEETTCSSCEE-----S----------------CCSSSCEEEEE-EECSSEEEEEES
T ss_pred             eEcCCCCEEEEEEEcCCCceEEEEEECCCCceEe-----c----------------ccCCEEEEEEE-EEeCCEEEEEEe
Confidence            9999999877 6653 44  47777776432110     0                00111233332 244655554433


Q ss_pred             C-----C--eEEEEecCCCeeeeeeccc---ccceEEEEEEcCCCcEEEEee
Q psy17610        462 N-----K--MIDYWETCDGSIIRSLEGS---DVAAVNCVDFVDDGKYFLTGG  503 (515)
Q Consensus       462 d-----g--~v~iwd~~~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~s~~  503 (515)
                      .     +  .|+..++..++....+...   .........|+|++++++...
T Consensus       383 ~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~  434 (740)
T 4a5s_A          383 EYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRC  434 (740)
T ss_dssp             CGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEEE
T ss_pred             cCCCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEEe
Confidence            2     3  4555555544433233311   125678899999999876543

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.91  E-value=7.3e-22  Score=180.58  Aligned_cols=289  Identities=13%  Similarity=0.094  Sum_probs=214.3

Q ss_pred             CCCEEEEEe------cCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec----------CCcEEEEeCCC
Q psy17610         92 VNNKVFVGT------VNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS----------KNDIRIWSVRT  155 (515)
Q Consensus        92 ~~~~l~~~~------~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~----------d~~i~iw~~~~  155 (515)
                      +++++++..      .|+.|.+||..+++.+.. +..+..+  .++|+||+++++++..          ++.|.+||..+
T Consensus        14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~-i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t   90 (361)
T 2oiz_A           14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGM-VPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADK   90 (361)
T ss_dssp             GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEE-EECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTT
T ss_pred             CCCEEEEECCCCCccccCeEEEEECCCCeEEEE-ecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcC
Confidence            556666653      367999999998765544 4445555  8999999999999873          56799999999


Q ss_pred             CceeEEEEec------CeEEEEEEEeeCCCEEEEEeC--CCeEEEEecCCCceEEE-ecCCCCCCeEEEEEcCCC-CEEE
Q psy17610        156 LNELLRISVM------NMICACIVFTYDGKAILSGWN--DGFIRCFTPQSGKLKFI-IPNAHNRGVTALAITQDG-TRLL  225 (515)
Q Consensus       156 ~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~--dg~i~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~-~~l~  225 (515)
                      ++.+.++...      ......++++|||++|+++..  ++.|.+||+.+++.+.. +.  .. ....+.+.|++ ..++
T Consensus        91 ~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~--~~-~~~~v~~~p~~~~~~~  167 (361)
T 2oiz_A           91 LTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTA--AA-GCWSVIPQPNRPRSFM  167 (361)
T ss_dssp             CCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGG--GT-TEEEEEECTTSSSEEE
T ss_pred             CcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEec--CC-CcceeEEcCCCCeeEE
Confidence            9998888753      233467899999999998874  57899999999988877 53  22 22335667765 6778


Q ss_pred             EecCCCcEEEEEccCCceeeE------EeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceE--EEEEEcC---
Q psy17610        226 SGGGEGQVRIWKLTRESQSLQ------CVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTR--LIIMILP---  294 (515)
Q Consensus       226 ~~~~d~~i~iw~~~~~~~~~~------~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~--~~~~~~~---  294 (515)
                      +.+.||.+.+|+..... ...      ..+.....++ .+.+++++..++..+.++.+.++|+.....  ...+...   
T Consensus       168 ~~~~dg~~~~v~~~~~g-~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~  245 (361)
T 2oiz_A          168 TICGDGGLLTINLGEDG-KVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDE  245 (361)
T ss_dssp             EEETTSSEEEEEECTTS-SEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHH
T ss_pred             EECCCCcEEEEEECCCC-cEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCcc
Confidence            88899999999985322 221      1112222222 234467788888888899999999865432  2222111   


Q ss_pred             --------ccEEEEEEcCCCcEEEEEEC-----------CCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEE
Q psy17610        295 --------SMIMSAAYHPSEVQLITCST-----------NKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTG  355 (515)
Q Consensus       295 --------~~~~~~~~~~~~~~l~~~~~-----------~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~  355 (515)
                              .....++++|+++.++++..           .+.|.+||+.+++.+.++..+.   +..++|+|||++|+++
T Consensus       246 ~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~---p~~ia~spdg~~l~v~  322 (361)
T 2oiz_A          246 DKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD---ALSMTIDQQRNLMLTL  322 (361)
T ss_dssp             HHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT---CCEEEEETTTTEEEEE
T ss_pred             ccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC---eeEEEECCCCCEEEEe
Confidence                    11123789999888877653           3589999999999999998774   8899999999999988


Q ss_pred             cCCCeEEEEEccCC--eeeeeccCCCCCeeEEEECCCCc
Q psy17610        356 GADQIVKMWMYREG--VPCFVGIGHAASITKIKISPDKK  392 (515)
Q Consensus       356 ~~dg~i~i~d~~~~--~~~~~~~~~~~~i~~~~~~~~~~  392 (515)
                      +. +.|.+||..++  +.+..+..+......++++|+|+
T Consensus       323 n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~  360 (361)
T 2oiz_A          323 DG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG  360 (361)
T ss_dssp             CS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred             CC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence            87 99999999999  99888777778889999999985

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.91  E-value=7.4e-22  Score=183.89  Aligned_cols=286  Identities=11%  Similarity=0.064  Sum_probs=201.3

Q ss_pred             EEEEEecCCCcEEE-----EEEecCCCEEEEEec-Cc--eEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec
Q psy17610         73 TALYLLKDDSGISS-----LQYNPVNNKVFVGTV-NC--EIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS  144 (515)
Q Consensus        73 ~~~~~~~~~~~v~~-----~~~s~~~~~l~~~~~-d~--~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~  144 (515)
                      ....+..|......     .+|||||++|+.++. ++  .|++||+.+++ ...+..++...+..++|+|||+.|+.++.
T Consensus        22 ~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~-~~~lt~~~~~~~~~~~~spdg~~l~~~~~  100 (388)
T 3pe7_A           22 QVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQV-ATQLTEGRGDNTFGGFLSPDDDALFYVKD  100 (388)
T ss_dssp             EEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCE-EEECCCSSCBCSSSCEECTTSSEEEEEET
T ss_pred             ceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCc-eEEeeeCCCCCccceEEcCCCCEEEEEeC
Confidence            34445556666665     899999999999887 66  49999999864 44555556666667889999999999999


Q ss_pred             CCcEEEEeCCCCceeEEEEecCeEEEEEE--EeeCCCEEEEEe----------------------CCCeEEEEecCCCce
Q psy17610        145 KNDIRIWSVRTLNELLRISVMNMICACIV--FTYDGKAILSGW----------------------NDGFIRCFTPQSGKL  200 (515)
Q Consensus       145 d~~i~iw~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~l~~~~----------------------~dg~i~~~~~~~~~~  200 (515)
                      ++.+.+||+.+++....+..+...+....  ++|++++++...                      .+..|.+||+.+++.
T Consensus       101 ~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~  180 (388)
T 3pe7_A          101 GRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGES  180 (388)
T ss_dssp             TTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCE
T ss_pred             CCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCce
Confidence            99999999999988776666665554443  488999887432                      346799999999876


Q ss_pred             EEEecCCCCCCeEEEEEcC-CCCEEEEecCC------CcEEEEEccCCceeeEEeecccc--CceEEEEEecCCCEEEEE
Q psy17610        201 KFIIPNAHNRGVTALAITQ-DGTRLLSGGGE------GQVRIWKLTRESQSLQCVLKEHT--SSVSVIQIKSDSKEAMSA  271 (515)
Q Consensus       201 ~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------~~i~iw~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~  271 (515)
                      ....  .+...+..+.|+| +|+.|+....+      ..|.++|.....  .. .+..+.  ..+....|+|||+.|+..
T Consensus       181 ~~l~--~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~--~~-~l~~~~~~~~~~~~~~spdg~~l~~~  255 (388)
T 3pe7_A          181 TVIL--QENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN--MR-KVKTHAEGESCTHEFWVPDGSALVYV  255 (388)
T ss_dssp             EEEE--EESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC--CE-ESCCCCTTEEEEEEEECTTSSCEEEE
T ss_pred             EEee--cCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc--eE-EeeeCCCCcccccceECCCCCEEEEE
Confidence            5544  4566789999999 99988876653      367777764322  22 223333  357788999999988665


Q ss_pred             eCC-C----cEEEEEcccceEEEEEEcCcc------EEEEEEcCCCcEEEEE---------ECCCeEEEEeCCCCceEEE
Q psy17610        272 STD-G----TCVLWDLIKSTRLIIMILPSM------IMSAAYHPSEVQLITC---------STNKMIDYWETCDGSIIRS  331 (515)
Q Consensus       272 ~~d-~----~i~iwd~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~~---------~~~~~i~~~d~~~~~~~~~  331 (515)
                      +.+ +    .|.+||+.+++.......+..      .....|+|+++.++..         ..+..|++||+.+++.. .
T Consensus       256 ~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~  334 (388)
T 3pe7_A          256 SYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQH-R  334 (388)
T ss_dssp             EEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEE-E
T ss_pred             ecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceE-E
Confidence            432 2    399999998876544333321      1113689999888754         44668999999887653 4


Q ss_pred             EecCCCc-----------cEEEEEEcCCCCEEEEEc-CCCeEEEEEc
Q psy17610        332 LEGSDVA-----------AVNCVDFVDDGKYFLTGG-ADQIVKMWMY  366 (515)
Q Consensus       332 ~~~~~~~-----------~i~~~~~~~~~~~l~~~~-~dg~i~i~d~  366 (515)
                      +..+. .           .+..++|+|||+.|+..+ .+|...+|.+
T Consensus       335 l~~~~-~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~  380 (388)
T 3pe7_A          335 VARHD-TSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLA  380 (388)
T ss_dssp             EEECC-CCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred             ecccc-CcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEE
Confidence            44332 2           467889999999887665 4666666644

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.91  E-value=1.1e-21  Score=182.67  Aligned_cols=300  Identities=14%  Similarity=0.070  Sum_probs=203.9

Q ss_pred             EEEecCCCceEEEecCCCCCCeEE-----EEEcCCCCEEEEecC-CCc--EEEEEccCCceeeEEeeccccCceEEEEEe
Q psy17610        191 RCFTPQSGKLKFIIPNAHNRGVTA-----LAITQDGTRLLSGGG-EGQ--VRIWKLTRESQSLQCVLKEHTSSVSVIQIK  262 (515)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~v~~-----~~~~~~~~~l~~~~~-d~~--i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~  262 (515)
                      ..++..++.....+ ..|......     .+|+|||++|+.++. ++.  |.+||+.  .........++...+..+.|+
T Consensus        13 ~~~~~~~g~~~~~l-t~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~--~g~~~~lt~~~~~~~~~~~~s   89 (388)
T 3pe7_A           13 TYQDASTGAQVTRL-TPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLN--TQVATQLTEGRGDNTFGGFLS   89 (388)
T ss_dssp             EEECTTTCCEEEEC-SCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETT--TCEEEECCCSSCBCSSSCEEC
T ss_pred             EEecCCCCcceEEe-cCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCC--CCceEEeeeCCCCCccceEEc
Confidence            34577777777666 456655555     789999999998877 664  7777774  444455555565555567899


Q ss_pred             cCCCEEEEEeCCCcEEEEEcccceEEEEEEcCcc-EEE--EEEcCCCcEEEEEE----------------------CCCe
Q psy17610        263 SDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSM-IMS--AAYHPSEVQLITCS----------------------TNKM  317 (515)
Q Consensus       263 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~--~~~~~~~~~l~~~~----------------------~~~~  317 (515)
                      ||++.|+.++.++.+++||+.+++.......+.. +..  ..++|+++.++...                      .+..
T Consensus        90 pdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (388)
T 3pe7_A           90 PDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCR  169 (388)
T ss_dssp             TTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEE
T ss_pred             CCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcce
Confidence            9999999999999999999999988777666554 322  34589999887532                      3468


Q ss_pred             EEEEeCCCCceEEEEecCCCccEEEEEEcC-CCCEEEEEcCC------CeEEEEEccCCeeeeeccCCC--CCeeEEEEC
Q psy17610        318 IDYWETCDGSIIRSLEGSDVAAVNCVDFVD-DGKYFLTGGAD------QIVKMWMYREGVPCFVGIGHA--ASITKIKIS  388 (515)
Q Consensus       318 i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~--~~i~~~~~~  388 (515)
                      |.+||+.+++........  ..+..+.|+| ||+.|+....+      ..|.++|...++. ..+..+.  ..+..++|+
T Consensus       170 l~~~d~~~g~~~~l~~~~--~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~s  246 (388)
T 3pe7_A          170 LMRVDLKTGESTVILQEN--QWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFWV  246 (388)
T ss_dssp             EEEEETTTCCEEEEEEES--SCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEEC
T ss_pred             EEEEECCCCceEEeecCC--ccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceEC
Confidence            999999998765444332  5688999999 99988877653      3788888766544 3333443  357889999


Q ss_pred             CCCcEEEEEeC-CC----cEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEe----
Q psy17610        389 PDKKVIVSVSA-DG----GIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITC----  459 (515)
Q Consensus       389 ~~~~~l~~~~~-dg----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~----  459 (515)
                      |||+.|+..+. ++    .|.+||+...+....     .. ..     .... ..   .......|+|||+.|+..    
T Consensus       247 pdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l-----~~-~~-----~~~~-~~---~~~~~~~~spdg~~l~~~~~~~  311 (388)
T 3pe7_A          247 PDGSALVYVSYLKGSPDRFIYSADPETLENRQL-----TS-MP-----ACSH-LM---SNYDGSLMVGDGSDAPVDVQDD  311 (388)
T ss_dssp             TTSSCEEEEEEETTCCCEEEEEECTTTCCEEEE-----EE-EC-----CEEE-EE---ECTTSSEEEEEECCC-------
T ss_pred             CCCCEEEEEecCCCCCcceEEEEecCCCceEEE-----Ec-CC-----Ccee-ee---ecCCCCeEccCCCcceeEeeec
Confidence            99997766543 22    399999876542100     00 00     0000 00   001123799999988854    


Q ss_pred             -----ecCCeEEEEecCCCeeeeeecccccc-----------eEEEEEEcCCCcEEEEee-cCCeEEEEEE
Q psy17610        460 -----STNKMIDYWETCDGSIIRSLEGSDVA-----------AVNCVDFVDDGKYFLTGG-ADQIVKICLY  513 (515)
Q Consensus       460 -----~~dg~v~iwd~~~~~~~~~~~~~~~~-----------~v~~~~~s~~~~~l~s~~-~dg~v~iw~~  513 (515)
                           ..+..|++||+.+++.. .+..+. .           .+.+++|+|||+.|+..+ .+|...||.+
T Consensus       312 ~~~~~~~~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~  380 (388)
T 3pe7_A          312 SGYKIENDPFLYVFNMKNGTQH-RVARHD-TSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLA  380 (388)
T ss_dssp             -----CCCCEEEEEETTTTEEE-EEEECC-CCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred             cccccCCCCEEEEEeccCCceE-Eecccc-CcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEE
Confidence                 44668999999887754 344333 3           477889999999888655 5788888865

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.90  E-value=2.3e-22  Score=188.30  Aligned_cols=163  Identities=14%  Similarity=0.112  Sum_probs=133.0

Q ss_pred             ecCCCcEEEEEEecCCCEEE----EEecCceEEEEECCCC-----ce-----eEEeeccCccCeEEEEeCCC-CcEEEEE
Q psy17610         78 LKDDSGISSLQYNPVNNKVF----VGTVNCEIFLIDMNSG-----FT-----LTLVNTCHTSAIYDLQFPVN-FSSVFAT  142 (515)
Q Consensus        78 ~~~~~~v~~~~~s~~~~~l~----~~~~d~~i~iw~~~~~-----~~-----~~~~~~~h~~~v~~~~~~~~-~~~l~~~  142 (515)
                      ..+.+.|.+++|+|++++||    +|+.|+.|++||+.++     ..     ....+.+|...|.+++|+|+ +..|+++
T Consensus        89 ~~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~  168 (434)
T 2oit_A           89 VPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVC  168 (434)
T ss_dssp             ECCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEE
T ss_pred             ccCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEE
Confidence            45788999999999999999    6788999999998753     11     13456779999999999998 7889999


Q ss_pred             ecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecC------CCCCCeEEEE
Q psy17610        143 CSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPN------AHNRGVTALA  216 (515)
Q Consensus       143 ~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~------~~~~~v~~~~  216 (515)
                      +.|++|++||++++..+.....|...+.+++|+|+|++|++|+.||.|++||++ ++....+..      .|...+.+++
T Consensus       169 s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~  247 (434)
T 2oit_A          169 LADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVL  247 (434)
T ss_dssp             ETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEE
T ss_pred             ECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEE
Confidence            999999999999987777777788899999999999999999999999999998 555544421      1234799999


Q ss_pred             EcCCCCEEEEe-cCCC------cEEEEEccCC
Q psy17610        217 ITQDGTRLLSG-GGEG------QVRIWKLTRE  241 (515)
Q Consensus       217 ~~~~~~~l~~~-~~d~------~i~iw~~~~~  241 (515)
                      |++++.++++. ..+|      .+++|++...
T Consensus       248 w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~  279 (434)
T 2oit_A          248 WIGTYVFAIVYAAADGTLETSPDVVMALLPKK  279 (434)
T ss_dssp             EEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred             EecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence            99988776543 3333      3899999754

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.90  E-value=7e-21  Score=175.16  Aligned_cols=246  Identities=11%  Similarity=0.014  Sum_probs=174.3

Q ss_pred             CCCcEEEEEEecCCCEEEEEecCceEEEEECC-CCceeEEeeccCccCeEEEEeCCCCcE--EEEEe-------------
Q psy17610         80 DDSGISSLQYNPVNNKVFVGTVNCEIFLIDMN-SGFTLTLVNTCHTSAIYDLQFPVNFSS--VFATC-------------  143 (515)
Q Consensus        80 ~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~--l~~~~-------------  143 (515)
                      ....+..++|+|+|++|++++.+ .|.+|++. +++..........+...+++|+|+|++  ++++.             
T Consensus        38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~  116 (365)
T 1jof_A           38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYK  116 (365)
T ss_dssp             TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred             CCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeec
Confidence            34568899999999999998888 99999997 654332211101123567899999985  34443             


Q ss_pred             cCCcEEEEeCC-CCceeEEEEe----cCeEEEEEEEeeCCCEEEEEeC-CCeEEEEecC-CCceEE--EecC-CCCCCeE
Q psy17610        144 SKNDIRIWSVR-TLNELLRISV----MNMICACIVFTYDGKAILSGWN-DGFIRCFTPQ-SGKLKF--IIPN-AHNRGVT  213 (515)
Q Consensus       144 ~d~~i~iw~~~-~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~-dg~i~~~~~~-~~~~~~--~~~~-~~~~~v~  213 (515)
                      .++.+.+|++. +++....+..    +...+.+++|+|+|++++++.. ++.|.+|++. +++...  .+.. .|...+.
T Consensus       117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~  196 (365)
T 1jof_A          117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPR  196 (365)
T ss_dssp             SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEE
T ss_pred             CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCC
Confidence            58899999997 4665544442    4567899999999998887764 6799999998 776532  2311 2456789


Q ss_pred             EEEEcCCCCEEEEecC-CCcEEEEEccCCceeeE------Eeec----cccC------ceEEEE-EecCCCEEEEEeCCC
Q psy17610        214 ALAITQDGTRLLSGGG-EGQVRIWKLTRESQSLQ------CVLK----EHTS------SVSVIQ-IKSDSKEAMSASTDG  275 (515)
Q Consensus       214 ~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~~~~------~~~~----~~~~------~v~~~~-~~~~~~~l~~~~~d~  275 (515)
                      .++|+|+|+++++++. ++.|.+|+++..+....      ..+.    +|..      .+..++ |+|||++|+++..+.
T Consensus       197 ~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~  276 (365)
T 1jof_A          197 WVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRAN  276 (365)
T ss_dssp             EEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEES
T ss_pred             EeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCC
Confidence            9999999999887764 68999998753332221      1122    1222      478899 999999988766432


Q ss_pred             ------cEEEEEcc-cceEEEE---EE-cCccEEEEEEcC---CCcEEEEEECC-CeEEEEeCCCC
Q psy17610        276 ------TCVLWDLI-KSTRLII---MI-LPSMIMSAAYHP---SEVQLITCSTN-KMIDYWETCDG  326 (515)
Q Consensus       276 ------~i~iwd~~-~~~~~~~---~~-~~~~~~~~~~~~---~~~~l~~~~~~-~~i~~~d~~~~  326 (515)
                            .|.+|++. +++....   .. .......++++|   ++++++++..+ +.|.+|++...
T Consensus       277 ~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~  342 (365)
T 1jof_A          277 KFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE  342 (365)
T ss_dssp             STTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred             CCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence                  89999996 5554432   22 233466789999   89999998864 89999988665

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.90  E-value=2.8e-21  Score=177.89  Aligned_cols=281  Identities=8%  Similarity=0.021  Sum_probs=185.4

Q ss_pred             EEEEecCC--CcEEEEEccCCceee--EEeec-cccCceEEEEEecCCCEEEEEeCCCcEEEEEcc-cceEEEEEEc--C
Q psy17610        223 RLLSGGGE--GQVRIWKLTRESQSL--QCVLK-EHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLI-KSTRLIIMIL--P  294 (515)
Q Consensus       223 ~l~~~~~d--~~i~iw~~~~~~~~~--~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~-~~~~~~~~~~--~  294 (515)
                      .+++|+..  +.|.+|+++..+...  ..... .....+..++|+|+++++++++.+ .|.+|++. +++.......  .
T Consensus         4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~   82 (365)
T 1jof_A            4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG   82 (365)
T ss_dssp             EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC
T ss_pred             EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC
Confidence            34555543  468888765333332  22211 233467889999999999998888 99999997 6665443332  2


Q ss_pred             ccEEEEEEcCCCcE--EEEEE-------------CCCeEEEEeCC-CCceEEEEec---CCCccEEEEEEcCCCCEEEEE
Q psy17610        295 SMIMSAAYHPSEVQ--LITCS-------------TNKMIDYWETC-DGSIIRSLEG---SDVAAVNCVDFVDDGKYFLTG  355 (515)
Q Consensus       295 ~~~~~~~~~~~~~~--l~~~~-------------~~~~i~~~d~~-~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~  355 (515)
                      .....++++|++++  ++++.             .++.+.+|++. .++....+..   .....+.+++|+|||++++++
T Consensus        83 g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~  162 (365)
T 1jof_A           83 GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSA  162 (365)
T ss_dssp             SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEE
T ss_pred             CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEE
Confidence            33456889999995  44442             68899999997 4665544432   233678899999999988876


Q ss_pred             cC-CCeEEEEEcc-CCeee--eecc--CCCCCeeEEEECCCCcEEEEEeC-CCcEEEEeCCCCcCccCCCcccceeeecc
Q psy17610        356 GA-DQIVKMWMYR-EGVPC--FVGI--GHAASITKIKISPDKKVIVSVSA-DGGIFLWTFPELEDDVGDSRSLSSKISRS  428 (515)
Q Consensus       356 ~~-dg~i~i~d~~-~~~~~--~~~~--~~~~~i~~~~~~~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~  428 (515)
                      .. ++.|++|++. +++..  ..+.  .|...+..++|+||+++|++++. ++.+.+|++..........   .......
T Consensus       163 ~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~---~~~~~~~  239 (365)
T 1jof_A          163 DLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYT---HHSFPLI  239 (365)
T ss_dssp             ETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEE---EEEEESS
T ss_pred             cCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEc---cceEEcC
Confidence            53 6799999998 66543  2232  24567899999999999988775 6899999875321100000   0000000


Q ss_pred             cccccceeeecCcc------cEEEee-eccCCcEEEEeecCC------eEEEEecC-CCeeeee---ecccccceEEEEE
Q psy17610        429 TARSTRLIIMILPS------MIMSAA-YHPSEVQLITCSTNK------MIDYWETC-DGSIIRS---LEGSDVAAVNCVD  491 (515)
Q Consensus       429 ~~~~~~~~~~~~~~------~i~~~~-~s~~~~~l~~~~~dg------~v~iwd~~-~~~~~~~---~~~~~~~~v~~~~  491 (515)
                        .   ....++..      .+..++ |+|||++|++++.+.      .|.+|++. ++++...   ...+. ..+..++
T Consensus       240 --~---~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~-~~~~~~a  313 (365)
T 1jof_A          240 --P---PGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPT-SGGHSNA  313 (365)
T ss_dssp             --C---TTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSS-CCTTCCC
T ss_pred             --C---CCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCC-CCcccce
Confidence              0   00001111      478899 999999988776432      89999996 6665432   22232 4566789


Q ss_pred             EcC---CCcEEEEeecC-CeEEEEEE
Q psy17610        492 FVD---DGKYFLTGGAD-QIVKICLY  513 (515)
Q Consensus       492 ~s~---~~~~l~s~~~d-g~v~iw~~  513 (515)
                      |+|   ||++|++++.+ +.|++|++
T Consensus       314 ~sp~~~dg~~l~v~~~~~~~v~v~~~  339 (365)
T 1jof_A          314 VSPCPWSDEWMAITDDQEGWLEIYRW  339 (365)
T ss_dssp             EEECTTCTTEEEEECSSSCEEEEEEE
T ss_pred             ecCCCcCCCEEEEEEcCCCeEEEEEE
Confidence            999   89999998864 89999986

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.90  E-value=1.4e-21  Score=183.06  Aligned_cols=238  Identities=14%  Similarity=0.079  Sum_probs=170.2

Q ss_pred             CCcEEEEEEecCCCEEEEEecCceEEEEECCCC----------ceeEE----eeccCccCeEEEEeCCCCcEEE----EE
Q psy17610         81 DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSG----------FTLTL----VNTCHTSAIYDLQFPVNFSSVF----AT  142 (515)
Q Consensus        81 ~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~----------~~~~~----~~~~h~~~v~~~~~~~~~~~l~----~~  142 (515)
                      ...++.+++++++.++++++.++ +++|+...-          .....    ....+...|.+++|+|++++|+    ++
T Consensus        36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sg  114 (434)
T 2oit_A           36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSS  114 (434)
T ss_dssp             CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEET
T ss_pred             CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEecc
Confidence            45689999999999999999887 888875320          01110    1113567899999999999999    56


Q ss_pred             ecCCcEEEEeCCCC--------ce---eEEEEecCeEEEEEEEeeC-CCEEEEEeCCCeEEEEecCCCceEEEecCCCCC
Q psy17610        143 CSKNDIRIWSVRTL--------NE---LLRISVMNMICACIVFTYD-GKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNR  210 (515)
Q Consensus       143 ~~d~~i~iw~~~~~--------~~---~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~  210 (515)
                      +.|+.|+|||+.++        +.   +..+.+|...|.+++|+|+ +++|++++.||.|++||++++...... .+|..
T Consensus       115 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~-~~~~~  193 (434)
T 2oit_A          115 EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCAT-LPSTV  193 (434)
T ss_dssp             TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEE-ECGGG
T ss_pred             CCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeec-cCCCC
Confidence            67999999998765        22   3334468899999999998 789999999999999999998766554 47889


Q ss_pred             CeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeecc-------ccCceEEEEEecCCCEEEEE-eCCC------c
Q psy17610        211 GVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKE-------HTSSVSVIQIKSDSKEAMSA-STDG------T  276 (515)
Q Consensus       211 ~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~-~~d~------~  276 (515)
                      .|.+++|+|+|++|++|+.||.|++||.+ ..  ....+..       |...|.+++|++++.++++. ..+|      .
T Consensus       194 ~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~--~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~  270 (434)
T 2oit_A          194 AVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQ--EKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPD  270 (434)
T ss_dssp             CEEEEEECTTSSCEEEEETTSCEEEECTT-CC--EEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCE
T ss_pred             ceeEEEEcCCCCEEEEEcCCCcEEEEccC-Cc--ccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCc
Confidence            99999999999999999999999999986 22  2222222       33489999999988776543 3343      3


Q ss_pred             EEEEEcccce-----EEEEEEcC--------ccEEEEEEcCCCcEEEEEEC-CCeEEEEeC
Q psy17610        277 CVLWDLIKST-----RLIIMILP--------SMIMSAAYHPSEVQLITCST-NKMIDYWET  323 (515)
Q Consensus       277 i~iwd~~~~~-----~~~~~~~~--------~~~~~~~~~~~~~~l~~~~~-~~~i~~~d~  323 (515)
                      +++|++++.+     ....+...        .+...+...++.+++++++. ...|.++..
T Consensus       271 v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~vl~~  331 (434)
T 2oit_A          271 VVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILAR  331 (434)
T ss_dssp             EEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEEEEE
T ss_pred             eEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCceeEEEe
Confidence            8999997642     11111111        12223334466666666554 444666553

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.89  E-value=2.7e-22  Score=187.47  Aligned_cols=329  Identities=10%  Similarity=0.008  Sum_probs=212.4

Q ss_pred             EEEECCCCceeEEeeccCcc-----CeEEEEeCCCCcEEEEEecC---CcEEEEeCCCCceeEEEEecCeEEE-EEEEee
Q psy17610        106 FLIDMNSGFTLTLVNTCHTS-----AIYDLQFPVNFSSVFATCSK---NDIRIWSVRTLNELLRISVMNMICA-CIVFTY  176 (515)
Q Consensus       106 ~iw~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~l~~~~~d---~~i~iw~~~~~~~~~~~~~~~~~v~-~~~~~~  176 (515)
                      ...|..++..+..+ ..+..     .+..++|+|||++|+.+...   ..|.+||+.+++... +..+..... .+.|+|
T Consensus        13 ~~~d~~~g~~~~~l-~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~-l~~~~~~~~~~~~~sp   90 (396)
T 3c5m_A           13 TFVDSDTQVKVTRL-TPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQ-LTEGKGDNTFGGFIST   90 (396)
T ss_dssp             EEECTTTCCEEEEC-SCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEE-CCCSSCBCTTTCEECT
T ss_pred             eeecCCCCcceEEE-ecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEE-eecCCCCccccceECC
Confidence            44577776554443 32332     37788999999998887653   468888998876543 333333322 378999


Q ss_pred             CCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCce
Q psy17610        177 DGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSV  256 (515)
Q Consensus       177 ~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v  256 (515)
                      ||++|+.++.++.|.+||+.+++..... ..+..      |+++|+.|+....+....+|..                  
T Consensus        91 dg~~l~~~~~~~~l~~~d~~~~~~~~~~-~~~~~------~~~~g~~l~~~~~~~~~~~~~~------------------  145 (396)
T 3c5m_A           91 DERAFFYVKNELNLMKVDLETLEEQVIY-TVDEE------WKGYGTWVANSDCTKLVGIEIL------------------  145 (396)
T ss_dssp             TSSEEEEEETTTEEEEEETTTCCEEEEE-ECCTT------EEEEEEEEECTTSSEEEEEEEE------------------
T ss_pred             CCCEEEEEEcCCcEEEEECCCCCcEEEE-ecccc------cCCCCCEEEeccCCcccccccc------------------
Confidence            9999999999999999999988766554 22322      6777888887776655544431                  


Q ss_pred             EEEEEecCCCEEEEE-----eCCCcEEEEEcccceEEEEEEcCccEEEEEEcC-CCcEEEEEECC------CeEEEEeCC
Q psy17610        257 SVIQIKSDSKEAMSA-----STDGTCVLWDLIKSTRLIIMILPSMIMSAAYHP-SEVQLITCSTN------KMIDYWETC  324 (515)
Q Consensus       257 ~~~~~~~~~~~l~~~-----~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~------~~i~~~d~~  324 (515)
                       ...++|+++.++..     ..+..|.+||+.+++..........+..+.|+| ++..++..+.+      ..|.+||+.
T Consensus       146 -~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~  224 (396)
T 3c5m_A          146 -KRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNED  224 (396)
T ss_dssp             -GGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETT
T ss_pred             -ccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECC
Confidence             12366788776654     356689999999888777777777889999999 78877766543      368889987


Q ss_pred             CCceEEEEecCC-CccEEEEEEcCCCCEEEEEcCC-----CeEEEEEccCCeeeeeccCCCCCeeEEEECC-CCcEEEEE
Q psy17610        325 DGSIIRSLEGSD-VAAVNCVDFVDDGKYFLTGGAD-----QIVKMWMYREGVPCFVGIGHAASITKIKISP-DKKVIVSV  397 (515)
Q Consensus       325 ~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~  397 (515)
                      .++... +..+. ...+..++|+|+|+.|+..+.+     +.|++||+.+++...... .. ... +.|+| |+++++++
T Consensus       225 ~~~~~~-l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~-~~~-~~~s~~dg~~l~~~  300 (396)
T 3c5m_A          225 GSNVRK-IKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV-MP-PCS-HLMSNFDGSLMVGD  300 (396)
T ss_dssp             SCCCEE-SSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE-CC-SEE-EEEECSSSSEEEEE
T ss_pred             CCceeE-eeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee-CC-CCC-CCccCCCCceEEEe
Confidence            655332 22221 2467889999999987776543     459999998876543221 11 123 89999 99988876


Q ss_pred             e----------------CCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeec
Q psy17610        398 S----------------ADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCST  461 (515)
Q Consensus       398 ~----------------~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~  461 (515)
                      +                .+..|.+||+......     .+......     ...........+..+.|+|+|+.|+..+.
T Consensus       301 ~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~-----~l~~~~~~-----~~~~~~~~~~~~~~~~~s~dg~~l~~~s~  370 (396)
T 3c5m_A          301 GCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ-----KLCKHSTS-----WDVLDGDRQITHPHPSFTPNDDGVLFTSD  370 (396)
T ss_dssp             ECCC----------CCCCCCEEEEEETTTTBCC-----EEEECCCC-----CCCBTTBSSTTCCCCEECTTSSEEEEEEC
T ss_pred             cCCcceeeccccccccCCCCcEEEEecccCceE-----EccCCCCc-----cccccccccCCCCCceEccCCCeEEEEec
Confidence            4                2467999998764321     00000000     00000000012456789999998887764


Q ss_pred             -CCe--EEEEecCCCeee
Q psy17610        462 -NKM--IDYWETCDGSII  476 (515)
Q Consensus       462 -dg~--v~iwd~~~~~~~  476 (515)
                       ++.  |+.+++.+++..
T Consensus       371 ~~~~~~l~~~~~~~~~~~  388 (396)
T 3c5m_A          371 FEGVPAIYIADVPESYKH  388 (396)
T ss_dssp             TTSSCEEEEEECCTTCC-
T ss_pred             CCCCceEEEEEEcccccc
Confidence             444  455555555443

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.89  E-value=3.2e-20  Score=169.69  Aligned_cols=259  Identities=11%  Similarity=0.062  Sum_probs=188.3

Q ss_pred             EEEEecCCCEEEEEec----------CceEEEEECCCCceeEEeecc-----CccCeEEEEeCCCCcEEEEEec--CCcE
Q psy17610         86 SLQYNPVNNKVFVGTV----------NCEIFLIDMNSGFTLTLVNTC-----HTSAIYDLQFPVNFSSVFATCS--KNDI  148 (515)
Q Consensus        86 ~~~~s~~~~~l~~~~~----------d~~i~iw~~~~~~~~~~~~~~-----h~~~v~~~~~~~~~~~l~~~~~--d~~i  148 (515)
                      .++|+|||++|+++..          ++.|.+||..+++....+...     +......++|+|||++|+++..  +++|
T Consensus        54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v  133 (361)
T 2oiz_A           54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSI  133 (361)
T ss_dssp             EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEE
T ss_pred             ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeE
Confidence            8999999999999863          678999999986555444321     2245678999999999999875  5789


Q ss_pred             EEEeCCCCceeEE-EEecCeEEEEEEEeeCC-CEEEEEeCCCeEEEEecCC-CceEEEec-----CCCCCCeEEEEEcCC
Q psy17610        149 RIWSVRTLNELLR-ISVMNMICACIVFTYDG-KAILSGWNDGFIRCFTPQS-GKLKFIIP-----NAHNRGVTALAITQD  220 (515)
Q Consensus       149 ~iw~~~~~~~~~~-~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~~~~~~-~~~~~~~~-----~~~~~~v~~~~~~~~  220 (515)
                      .+||+.+++.+.. +....  ...+.+.|++ ..+++.+.||.+.+|+.+. ++......     .....++ .+.++++
T Consensus       134 ~v~d~~~~~~~~~~i~~~~--~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~  210 (361)
T 2oiz_A          134 GIVDVAKGDYVEDVTAAAG--CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPALD  210 (361)
T ss_dssp             EEEETTTTEEEEEEGGGTT--EEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEEC
T ss_pred             EEEECCCCcEEEEEecCCC--cceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCce-EEEeccc
Confidence            9999999887766 43222  1225567765 6778888999999998865 55442211     1122222 3334567


Q ss_pred             CCEEEEecCCCcEEEEEccCCceeeEEeecc------c----cCceEEEEEecCCCEEEEEeC-----------CCcEEE
Q psy17610        221 GTRLLSGGGEGQVRIWKLTRESQSLQCVLKE------H----TSSVSVIQIKSDSKEAMSAST-----------DGTCVL  279 (515)
Q Consensus       221 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~------~----~~~v~~~~~~~~~~~l~~~~~-----------d~~i~i  279 (515)
                      +..++..+.++.+.++|+..........+..      +    ......++++|+++.++++..           .+.|.+
T Consensus       211 g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~v  290 (361)
T 2oiz_A          211 KDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWV  290 (361)
T ss_dssp             SSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEE
T ss_pred             CCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEE
Confidence            7777777888999999986443332222110      0    111223789999888877653           347999


Q ss_pred             EEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCC--ceEEEEecCCCccEEEEEEcCCCC
Q psy17610        280 WDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDG--SIIRSLEGSDVAAVNCVDFVDDGK  350 (515)
Q Consensus       280 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~--~~~~~~~~~~~~~i~~~~~~~~~~  350 (515)
                      ||+.+.+.+..+..+. +..++++|++++++++.. +.|.+||..++  +.+..+.... .....++++|+|+
T Consensus       291 iD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G-~~P~~~~~~p~G~  360 (361)
T 2oiz_A          291 MDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAA-EASLQVQFHPVGG  360 (361)
T ss_dssp             EETTTTEEEEEEECTT-CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSC-SSEEEEEECCCSC
T ss_pred             EECCCCcEEEEEecCC-eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCC-CCcEEEEecCCCC
Confidence            9999999999998888 999999999999998887 99999999999  8888875433 5677899999985

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.88  E-value=1.8e-18  Score=165.70  Aligned_cols=318  Identities=12%  Similarity=0.052  Sum_probs=231.9

Q ss_pred             ecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCC--CCceeEEEEecCe
Q psy17610         90 NPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVR--TLNELLRISVMNM  167 (515)
Q Consensus        90 s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~--~~~~~~~~~~~~~  167 (515)
                      +|.+.++++...++.|.++|..+++.+..+..  ...+..+.|+|||+++++++.++.|.+||+.  +++.+.++.....
T Consensus       164 d~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~--g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~  241 (567)
T 1qks_A          164 DLENLFSVTLRDAGQIALIDGSTYEIKTVLDT--GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSE  241 (567)
T ss_dssp             CGGGEEEEEETTTTEEEEEETTTCCEEEEEEC--SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSE
T ss_pred             CCCceEEEEeCCCCeEEEEECCCCeEEEEEeC--CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCC
Confidence            34455666667789999999999765555443  2356799999999999999999999999996  8888888876554


Q ss_pred             EEEEEEEe----eCCCEEEEEeC-CCeEEEEecCCCceEEEecCC---------CCC-CeEEEEEcCCCCE-EEEecCCC
Q psy17610        168 ICACIVFT----YDGKAILSGWN-DGFIRCFTPQSGKLKFIIPNA---------HNR-GVTALAITQDGTR-LLSGGGEG  231 (515)
Q Consensus       168 ~v~~~~~~----~~~~~l~~~~~-dg~i~~~~~~~~~~~~~~~~~---------~~~-~v~~~~~~~~~~~-l~~~~~d~  231 (515)
                       ...++|+    |||++++++.. ++.+.++|..+.+.+..+...         |.. .+..+..++++.. ++....+|
T Consensus       242 -P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g  320 (567)
T 1qks_A          242 -ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETG  320 (567)
T ss_dssp             -EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTT
T ss_pred             -CceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCC
Confidence             4789999    69998887765 589999999999988776432         222 6788888887654 44556679


Q ss_pred             cEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEe-CCCcEEEEEcccceEEEEEEc-CccE---EEEE-EcCC
Q psy17610        232 QVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAS-TDGTCVLWDLIKSTRLIIMIL-PSMI---MSAA-YHPS  305 (515)
Q Consensus       232 ~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~-~~~~---~~~~-~~~~  305 (515)
                      .|.++|...........+ ........+.|+|++++++++. .++.|.++|+.+++....+.. ....   .... ++|+
T Consensus       321 ~v~~vd~~~~~~~~v~~i-~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~  399 (567)
T 1qks_A          321 KILLVDYTDLNNLKTTEI-SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPT  399 (567)
T ss_dssp             EEEEEETTCSSEEEEEEE-ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETT
T ss_pred             eEEEEecCCCccceeeee-eccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCC
Confidence            999999864432222222 2344567889999999987766 578999999999988777765 2211   1222 5787


Q ss_pred             CcEEE-EEE-CCCeEEEEeCCC-------CceEEEEecCCCccEEEEEEcCCCCEEEEEcC-------CCeEEEEEccCC
Q psy17610        306 EVQLI-TCS-TNKMIDYWETCD-------GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA-------DQIVKMWMYREG  369 (515)
Q Consensus       306 ~~~l~-~~~-~~~~i~~~d~~~-------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-------dg~i~i~d~~~~  369 (515)
                      +..+. +.. .++.|.++|..+       .+.++++.... ..-..+..+|+++++.+...       .+.|.++|+.+.
T Consensus       400 ~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g-~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~  478 (567)
T 1qks_A          400 FGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALG-GGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAM  478 (567)
T ss_dssp             TEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSC-SCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred             CCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCC-CCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcc
Confidence            55554 443 468999999988       67888887653 33345778999999998763       358999999876


Q ss_pred             -----eee-eecc--------CCCCCeeEEEECCCCcEEEEEe-----CCCcEEEEeCCCCc
Q psy17610        370 -----VPC-FVGI--------GHAASITKIKISPDKKVIVSVS-----ADGGIFLWTFPELE  412 (515)
Q Consensus       370 -----~~~-~~~~--------~~~~~i~~~~~~~~~~~l~~~~-----~dg~i~iw~~~~~~  412 (515)
                           ... ..+.        .....+..+.|+|+|+.+..+.     .++.|.++|..+.+
T Consensus       479 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~  540 (567)
T 1qks_A          479 TGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLE  540 (567)
T ss_dssp             CCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred             cccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCce
Confidence                 211 2221        1245788999999999887763     37899999988764

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.88  E-value=3.4e-21  Score=179.97  Aligned_cols=280  Identities=8%  Similarity=-0.023  Sum_probs=190.9

Q ss_pred             EEEEEEecCCCEEEEEecC---ceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeE
Q psy17610         84 ISSLQYNPVNNKVFVGTVN---CEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELL  160 (515)
Q Consensus        84 v~~~~~s~~~~~l~~~~~d---~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~  160 (515)
                      +.+++|||||++|+.....   ..|++||+.+++ ...+..++......+.|+|||+.|+.++.++.|.+||+.+++...
T Consensus        38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~-~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~  116 (396)
T 3c5m_A           38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQ-AVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQV  116 (396)
T ss_dssp             TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTE-EEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEE
T ss_pred             eecCcCCCCCCEEEEEEecCCCceEEEEECCCCc-EEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEE
Confidence            6778999999998887543   479999998864 333333333333347899999999999999999999999887665


Q ss_pred             EEEecCeEEEE-------------------EEEeeCCCEEEEE-----eCCCeEEEEecCCCceEEEecCCCCCCeEEEE
Q psy17610        161 RISVMNMICAC-------------------IVFTYDGKAILSG-----WNDGFIRCFTPQSGKLKFIIPNAHNRGVTALA  216 (515)
Q Consensus       161 ~~~~~~~~v~~-------------------~~~~~~~~~l~~~-----~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~  216 (515)
                      ....+......                   +.|+|+++.++..     ..+..|.+||+.+++.....  .+...+..+.
T Consensus       117 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~--~~~~~~~~~~  194 (396)
T 3c5m_A          117 IYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH--QDTAWLGHPI  194 (396)
T ss_dssp             EEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE--EESSCEEEEE
T ss_pred             EEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec--cCCcccccce
Confidence            55534332222                   3456677665543     35668999999988876554  4667789999


Q ss_pred             EcC-CCCEEEEecCC------CcEEEEEccCCceeeEEeeccc-cCceEEEEEecCCCEEEEEeCC-----CcEEEEEcc
Q psy17610        217 ITQ-DGTRLLSGGGE------GQVRIWKLTRESQSLQCVLKEH-TSSVSVIQIKSDSKEAMSASTD-----GTCVLWDLI  283 (515)
Q Consensus       217 ~~~-~~~~l~~~~~d------~~i~iw~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~  283 (515)
                      |+| +++.|+..+.+      ..|.+|++....  ........ ...+..+.|+|++++|+.++.+     +.|.+||+.
T Consensus       195 ~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~--~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~  272 (396)
T 3c5m_A          195 YRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSN--VRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPE  272 (396)
T ss_dssp             EETTEEEEEEEEECSCSSSCSCCCEEEETTSCC--CEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTT
T ss_pred             ECCCCCCEEEEEecCCCCCCCceEEEEECCCCc--eeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECC
Confidence            999 78877765543      358888875332  22222211 2357789999999988777654     449999998


Q ss_pred             cceEEEEEEcCccEEEEEEcC-CCcEEEEEE----------------CCCeEEEEeCCCCceEEEEecCCCc--------
Q psy17610        284 KSTRLIIMILPSMIMSAAYHP-SEVQLITCS----------------TNKMIDYWETCDGSIIRSLEGSDVA--------  338 (515)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~----------------~~~~i~~~d~~~~~~~~~~~~~~~~--------  338 (515)
                      +++.......+. .. ..|+| +++.++.+.                .+..|++||+.+++.. .+..+...        
T Consensus       273 ~g~~~~l~~~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~~~  349 (396)
T 3c5m_A          273 TLENEEVMVMPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ-KLCKHSTSWDVLDGDR  349 (396)
T ss_dssp             TCCEEEEEECCS-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCC-EEEECCCCCCCBTTBS
T ss_pred             CCCeEEeeeCCC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceE-EccCCCCccccccccc
Confidence            887655444443 33 88999 999888754                3478999999887653 33333211        


Q ss_pred             --cEEEEEEcCCCCEEEEEcC-CCe--EEEEEccCCee
Q psy17610        339 --AVNCVDFVDDGKYFLTGGA-DQI--VKMWMYREGVP  371 (515)
Q Consensus       339 --~i~~~~~~~~~~~l~~~~~-dg~--i~i~d~~~~~~  371 (515)
                        ....++|+|+|+.|+..+. ++.  |..+++.+++.
T Consensus       350 ~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~~  387 (396)
T 3c5m_A          350 QITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESYK  387 (396)
T ss_dssp             STTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTCC
T ss_pred             cCCCCCceEccCCCeEEEEecCCCCceEEEEEEccccc
Confidence              2456789999998877664 444  44445555443

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.87  E-value=6.6e-18  Score=161.89  Aligned_cols=293  Identities=11%  Similarity=-0.008  Sum_probs=210.1

Q ss_pred             CCCcEEEEEEecCCCEEEEEecCceEEEEECC--CCceeEEeeccCccCeEEEEeC----CCCcEEEEEec-CCcEEEEe
Q psy17610         80 DDSGISSLQYNPVNNKVFVGTVNCEIFLIDMN--SGFTLTLVNTCHTSAIYDLQFP----VNFSSVFATCS-KNDIRIWS  152 (515)
Q Consensus        80 ~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~--~~~~~~~~~~~h~~~v~~~~~~----~~~~~l~~~~~-d~~i~iw~  152 (515)
                      ....+..++|||||+++++++.++.|.+||+.  +++.+..+..+  .....++|+    |||+++++++. ++++.++|
T Consensus       195 ~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G--~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD  272 (567)
T 1qks_A          195 TGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG--SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMD  272 (567)
T ss_dssp             CSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECC--SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEE
T ss_pred             CCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecC--CCCceeEEccccCCCCCEEEEEEccCCeEEEEE
Confidence            34466789999999999999999999999995  65555444332  235789999    69999999887 69999999


Q ss_pred             CCCCceeEEEEec-----------CeEEEEEEEeeCCCEEE-EEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCC
Q psy17610        153 VRTLNELLRISVM-----------NMICACIVFTYDGKAIL-SGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQD  220 (515)
Q Consensus       153 ~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~l~-~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  220 (515)
                      ..+.+.+..+...           ...+..+..++++..++ ....+|.|.++|..+.+...............+.|+|+
T Consensus       273 ~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pd  352 (567)
T 1qks_A          273 GETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGS  352 (567)
T ss_dssp             TTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTT
T ss_pred             CCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCC
Confidence            9999998877632           12577888888876554 44567999999988764332221233455778999999


Q ss_pred             CCEEEEec-CCCcEEEEEccCCceeeEEeecc-----ccCceEEEEEecCCCEEEEEe--CCCcEEEEEccc-------c
Q psy17610        221 GTRLLSGG-GEGQVRIWKLTRESQSLQCVLKE-----HTSSVSVIQIKSDSKEAMSAS--TDGTCVLWDLIK-------S  285 (515)
Q Consensus       221 ~~~l~~~~-~d~~i~iw~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~--~d~~i~iwd~~~-------~  285 (515)
                      +++++++. .++.|.++|..+.+  ....+..     |.+.-..+ ++|++..++..+  .+++|.++|..+       .
T Consensus       353 gr~~~va~~~sn~V~ViD~~t~k--l~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~  429 (567)
T 1qks_A          353 HRYFITAANARNKLVVIDTKEGK--LVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAW  429 (567)
T ss_dssp             SCEEEEEEGGGTEEEEEETTTTE--EEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBT
T ss_pred             CCEEEEEeCCCCeEEEEECCCCc--EEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccC
Confidence            99887655 57899999996543  3332222     33222222 578755555443  468999999987       5


Q ss_pred             eEEEEEEcCc-cEEEEEEcCCCcEEEEEEC-------CCeEEEEeCCCC-----ce-EEEEec-------CCCccEEEEE
Q psy17610        286 TRLIIMILPS-MIMSAAYHPSEVQLITCST-------NKMIDYWETCDG-----SI-IRSLEG-------SDVAAVNCVD  344 (515)
Q Consensus       286 ~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~-------~~~i~~~d~~~~-----~~-~~~~~~-------~~~~~i~~~~  344 (515)
                      +.+..+.... ....+..+|+++++.+...       .+.|.++|+.+.     .. ...+..       .....+..+.
T Consensus       430 kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  509 (567)
T 1qks_A          430 KILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGE  509 (567)
T ss_dssp             SEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEE
T ss_pred             EEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeee
Confidence            6777776653 3355778999999998763       358999998876     22 233321       1225788999


Q ss_pred             EcCCCCEEEEEc-----CCCeEEEEEccCCeeeeeccC
Q psy17610        345 FVDDGKYFLTGG-----ADQIVKMWMYREGVPCFVGIG  377 (515)
Q Consensus       345 ~~~~~~~l~~~~-----~dg~i~i~d~~~~~~~~~~~~  377 (515)
                      |+|+|+.+.++.     .++.|.++|.++++....+..
T Consensus       510 ~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~  547 (567)
T 1qks_A          510 FNKDGTEVWFSVWNGKDQESALVVVDDKTLELKHVIKD  547 (567)
T ss_dssp             ECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECC
T ss_pred             ECCCCCEEEEEeecCCCCCCcEEEEECCCceEEEEeCC
Confidence            999999887763     378999999999998887754

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.87  E-value=2.7e-20  Score=185.91  Aligned_cols=326  Identities=7%  Similarity=-0.037  Sum_probs=212.8

Q ss_pred             EecCCCcEEEEEEecCCCEEEEE--ecCceEEEEECCCCceeEEeeccCccCeE---------EEEeC--CCCcE-EEEE
Q psy17610         77 LLKDDSGISSLQYNPVNNKVFVG--TVNCEIFLIDMNSGFTLTLVNTCHTSAIY---------DLQFP--VNFSS-VFAT  142 (515)
Q Consensus        77 ~~~~~~~v~~~~~s~~~~~l~~~--~~d~~i~iw~~~~~~~~~~~~~~h~~~v~---------~~~~~--~~~~~-l~~~  142 (515)
                      +.+|...+..++|++++-+++..  ..++...||....+..... +..|...+.         ...|+  |||+. |+.+
T Consensus        19 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~   97 (662)
T 3azo_A           19 VASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEES-ALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFT   97 (662)
T ss_dssp             HHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEE-SSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEE
T ss_pred             HhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcce-eCCCCccccccccccCCccceeeeecCCCeEEEEE
Confidence            44688999999999876666665  4478899998644334333 344655555         55565  99998 7766


Q ss_pred             ec-CCcEEEEeCC--CCceeEEEEe-----cCeEEEEEEEeeCCCEEEEEeCC----------CeEEEEecCC------C
Q psy17610        143 CS-KNDIRIWSVR--TLNELLRISV-----MNMICACIVFTYDGKAILSGWND----------GFIRCFTPQS------G  198 (515)
Q Consensus       143 ~~-d~~i~iw~~~--~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d----------g~i~~~~~~~------~  198 (515)
                      +. +..|.+|++.  .......+..     +...+..++|+|||+.|++++.+          ..|.+||+.+      +
T Consensus        98 ~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  177 (662)
T 3azo_A           98 HFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRS  177 (662)
T ss_dssp             BTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGG
T ss_pred             ECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCC
Confidence            54 5567777765  2044555555     56788999999999999988876          5899999988      6


Q ss_pred             ceEEEecC-CCCCCeEEEEEcCCCCEEEEecCC--------CcEEEEEcc-CCc-eeeEEeeccccCceEEEEEecCCCE
Q psy17610        199 KLKFIIPN-AHNRGVTALAITQDGTRLLSGGGE--------GQVRIWKLT-RES-QSLQCVLKEHTSSVSVIQIKSDSKE  267 (515)
Q Consensus       199 ~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d--------~~i~iw~~~-~~~-~~~~~~~~~~~~~v~~~~~~~~~~~  267 (515)
                      +.. .+ . .+...+..++|+|||++|+.++.+        ..|.+||+. .+. ........+|...+..+.|+|||++
T Consensus       178 ~~~-~l-~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l  255 (662)
T 3azo_A          178 AVR-EL-SDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSL  255 (662)
T ss_dssp             GSE-ES-SCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCE
T ss_pred             cee-EE-EecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeE
Confidence            554 33 3 455678889999999999977754        379999996 231 1333344455788999999999997


Q ss_pred             EEEEeCCC--cEEEEEcccceEEEEEEcCcc---------EEEEEEcCCCcEEEEEECCCeEEEE--eCCCCceEEEEec
Q psy17610        268 AMSASTDG--TCVLWDLIKSTRLIIMILPSM---------IMSAAYHPSEVQLITCSTNKMIDYW--ETCDGSIIRSLEG  334 (515)
Q Consensus       268 l~~~~~d~--~i~iwd~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~~~~~~~~i~~~--d~~~~~~~~~~~~  334 (515)
                      ++++..++  .|.+||+.+++..........         +..++++|+++.++++.. +.+++|  |+.+++ +..+..
T Consensus       256 ~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~  333 (662)
T 3azo_A          256 IVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAG  333 (662)
T ss_dssp             EEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCS
T ss_pred             EEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecC
Confidence            77777788  566677666665443333221         457888999999999988 888888  655554 566655


Q ss_pred             CCCccEEEE-EEcCCCCEEEEEcCCC--eEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeC
Q psy17610        335 SDVAAVNCV-DFVDDGKYFLTGGADQ--IVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTF  408 (515)
Q Consensus       335 ~~~~~i~~~-~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~  408 (515)
                      +. ..+..+ +++++.-+++.++.+.  .|.++|+.+++.......+...+....+.+.....+....+..+..|-.
T Consensus       334 ~~-~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~dg~~i~~~~~  409 (662)
T 3azo_A          334 PW-TEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTIGARHTDPVDPAYYPEPQIRTFTAPDGREIHAHIY  409 (662)
T ss_dssp             SC-CEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEEESCCCCSSCGGGSCCCEEEEEECTTSCEEEEEEE
T ss_pred             CC-CeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEeecCCcccCCccccCcceEEEEEcCCCCEEEEEEE
Confidence            53 566666 4544333344445554  4555666676654433444433333333333333333323335555543

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.86  E-value=7.2e-20  Score=182.84  Aligned_cols=286  Identities=9%  Similarity=-0.013  Sum_probs=199.0

Q ss_pred             eccCccCeEEEEeCCCCcEEEEE--ecCCcEEEEeCCCCceeEEEEecCeEEE---------EEEEe--eCCCE-EEEEe
Q psy17610        120 NTCHTSAIYDLQFPVNFSSVFAT--CSKNDIRIWSVRTLNELLRISVMNMICA---------CIVFT--YDGKA-ILSGW  185 (515)
Q Consensus       120 ~~~h~~~v~~~~~~~~~~~l~~~--~~d~~i~iw~~~~~~~~~~~~~~~~~v~---------~~~~~--~~~~~-l~~~~  185 (515)
                      +.+|...+..++|++++-.++..  ..++...||....+.....+..+...+.         ...|+  |||+. |+.++
T Consensus        19 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~   98 (662)
T 3azo_A           19 VASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTH   98 (662)
T ss_dssp             HHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEB
T ss_pred             HhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEE
Confidence            45688899999999885444544  3378899999765566666666665555         55566  99998 77665


Q ss_pred             C-CCeEEEEecC--C-CceEEEecCC-----CCCCeEEEEEcCCCCEEEEecCC----------CcEEEEEccCCc----
Q psy17610        186 N-DGFIRCFTPQ--S-GKLKFIIPNA-----HNRGVTALAITQDGTRLLSGGGE----------GQVRIWKLTRES----  242 (515)
Q Consensus       186 ~-dg~i~~~~~~--~-~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d----------~~i~iw~~~~~~----  242 (515)
                      . +..|.++++.  + ++.. .+ ..     |...+..++|+|||+.|++++.+          ..|++||+....    
T Consensus        99 ~~~~~l~~~~~~~~g~~~~~-~l-~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  176 (662)
T 3azo_A           99 FGDQRLYAFEPDAPGGAVPR-PL-TPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADR  176 (662)
T ss_dssp             TTTCCEEEECTTSTTCCCCE-EC-SCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCG
T ss_pred             CCCCeEEEEcCCCCCCCCCE-ec-cCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccC
Confidence            4 5677777776  3 4433 33 23     66778999999999999988876          589999986410    


Q ss_pred             eeeEEeec-cccCceEEEEEecCCCEEEEEeCC--------CcEEEEEcc-cc---eEEEEEEc-CccEEEEEEcCCCcE
Q psy17610        243 QSLQCVLK-EHTSSVSVIQIKSDSKEAMSASTD--------GTCVLWDLI-KS---TRLIIMIL-PSMIMSAAYHPSEVQ  308 (515)
Q Consensus       243 ~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d--------~~i~iwd~~-~~---~~~~~~~~-~~~~~~~~~~~~~~~  308 (515)
                      ... ..+. .+...+..++|+|||++|+.++.+        ..|++||+. ++   +....... ...+..+.|+|+++.
T Consensus       177 ~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l  255 (662)
T 3azo_A          177 SAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSL  255 (662)
T ss_dssp             GGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCE
T ss_pred             Cce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeE
Confidence            222 2334 455678889999999999988755        379999998 56   44444443 467899999999997


Q ss_pred             EEEEECCC--eEEEEeCCCCceEEEEecCCCcc--------EEEEEEcCCCCEEEEEcCCCeEEEE--EccCCeeeeecc
Q psy17610        309 LITCSTNK--MIDYWETCDGSIIRSLEGSDVAA--------VNCVDFVDDGKYFLTGGADQIVKMW--MYREGVPCFVGI  376 (515)
Q Consensus       309 l~~~~~~~--~i~~~d~~~~~~~~~~~~~~~~~--------i~~~~~~~~~~~l~~~~~dg~i~i~--d~~~~~~~~~~~  376 (515)
                      ++++..++  .|..||+.+++.......+. ..        +..++|+|++++++++.. +.++||  |..+++ +..+.
T Consensus       256 ~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~-~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~  332 (662)
T 3azo_A          256 IVATDRTGWWNLHRVDPATGAATQLCRREE-EFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAA  332 (662)
T ss_dssp             EEEECTTSSCEEEEECTTTCCEEESSCCSS-BSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECC
T ss_pred             EEEECCCCCeEEEEEECCCCceeecccccc-cccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEec
Confidence            77777777  67778876766543332221 11        467899999999999998 999998  554554 56777


Q ss_pred             CCCCCeeEE-EECCCCcEEEEEeCCCcEEE--EeCCCC
Q psy17610        377 GHAASITKI-KISPDKKVIVSVSADGGIFL--WTFPEL  411 (515)
Q Consensus       377 ~~~~~i~~~-~~~~~~~~l~~~~~dg~i~i--w~~~~~  411 (515)
                      .|...+..+ +++++.-++++++.+....+  +|+...
T Consensus       333 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g  370 (662)
T 3azo_A          333 GPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTG  370 (662)
T ss_dssp             SSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTC
T ss_pred             CCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence            787778777 55444444445555554444  455443

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.85  E-value=1.5e-18  Score=157.78  Aligned_cols=272  Identities=15%  Similarity=0.085  Sum_probs=195.8

Q ss_pred             cCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEe
Q psy17610        125 SAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFII  204 (515)
Q Consensus       125 ~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~  204 (515)
                      ..|.+++|+|++..++..+.++.++.|   .++....+..+...+.+++|+|+++.++++..++.|.+||.++++.....
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~   82 (333)
T 2dg1_A            6 QDLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPF   82 (333)
T ss_dssp             CCCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEE
T ss_pred             cccceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEe
Confidence            457888999998877777788899999   35566667766667789999999997778888999999999988766544


Q ss_pred             cCCCCCCeEEEEEcCCCCEEEEecCC----CcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeC------C
Q psy17610        205 PNAHNRGVTALAITQDGTRLLSGGGE----GQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST------D  274 (515)
Q Consensus       205 ~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------d  274 (515)
                       ..+...+.+++++++|+++++...+    +.|.+||..............+...+..++++|+++.+++...      .
T Consensus        83 -~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~  161 (333)
T 2dg1_A           83 -VSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPL  161 (333)
T ss_dssp             -ECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCC
T ss_pred             -eCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCC
Confidence             2456789999999999988877666    6899999864433211111124457889999999987776653      3


Q ss_pred             CcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEE-ECCCeEEEEeCCC-CceEEEE------ecCCCccEEEEEEc
Q psy17610        275 GTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITC-STNKMIDYWETCD-GSIIRSL------EGSDVAAVNCVDFV  346 (515)
Q Consensus       275 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~i~~~d~~~-~~~~~~~------~~~~~~~i~~~~~~  346 (515)
                      +.|..+|..+++..........+..++++|+++.++++ ..++.|.+||..+ +..+..+      .......+..++++
T Consensus       162 ~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d  241 (333)
T 2dg1_A          162 GGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCID  241 (333)
T ss_dssp             EEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEB
T ss_pred             ceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEEC
Confidence            55666776555544333333457889999999866555 4578999999864 3332211      11111467889999


Q ss_pred             CCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCC------CeeEEEECCCCcEEEEEeCCC
Q psy17610        347 DDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAA------SITKIKISPDKKVIVSVSADG  401 (515)
Q Consensus       347 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~------~i~~~~~~~~~~~l~~~~~dg  401 (515)
                      ++|+++++...++.|.+||. +++.+..+..+..      .+.+++|+||++.|+.++.++
T Consensus       242 ~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g  301 (333)
T 2dg1_A          242 SDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDI  301 (333)
T ss_dssp             TTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred             CCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCcc
Confidence            99998888777889999998 4555555543332      689999999987776665553

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.85  E-value=4.6e-18  Score=155.59  Aligned_cols=268  Identities=9%  Similarity=0.026  Sum_probs=184.2

Q ss_pred             CcEEEEEEecCCCEEEEEe---------cCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecC---C--c
Q psy17610         82 SGISSLQYNPVNNKVFVGT---------VNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSK---N--D  147 (515)
Q Consensus        82 ~~v~~~~~s~~~~~l~~~~---------~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d---~--~  147 (515)
                      ..+...++  ||+++|...         .++.|++||+++++. ..+     ..+..++|+|||++|+.++.+   +  .
T Consensus        15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~l-----~~~~~~~~SpDg~~la~~~~~~~~~~~~   86 (347)
T 2gop_A           15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNAR-RFI-----ENATMPRISPDGKKIAFMRANEEKKVSE   86 (347)
T ss_dssp             CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCE-EEE-----ESCEEEEECTTSSEEEEEEEETTTTEEE
T ss_pred             EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCce-EEc-----ccCCCeEECCCCCEEEEEEeccCCCcce
Confidence            45677777  888887653         257899999998653 222     568899999999999988764   3  3


Q ss_pred             EEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCC---------------------------CeEEEEecCCCce
Q psy17610        148 IRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWND---------------------------GFIRCFTPQSGKL  200 (515)
Q Consensus       148 i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------------------------g~i~~~~~~~~~~  200 (515)
                      |.+|++.+++...... ... +..++|+|||+.|+.++.+                           ..|.+||+.+++.
T Consensus        87 l~~~~~~~g~~~~l~~-~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~  164 (347)
T 2gop_A           87 IWVADLETLSSKKILE-AKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEV  164 (347)
T ss_dssp             EEEEETTTTEEEEEEE-ESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEE
T ss_pred             EEEEECCCCceEEEEc-CCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeE
Confidence            7888888776554443 344 8999999999999887642                           5789999998887


Q ss_pred             EEEecCCCCCCeEEEEEcCCCCEEEEecCCC-------cEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeC
Q psy17610        201 KFIIPNAHNRGVTALAITQDGTRLLSGGGEG-------QVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST  273 (515)
Q Consensus       201 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-------~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  273 (515)
                      ...+..  . .+..+.|+|+| +++++..++       ...+|.++..  ... .+..+ ..+..+  +|+|+.++.++.
T Consensus       165 ~~~l~~--~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~--~~~-~l~~~-~~~~~~--spdg~~l~~~~~  234 (347)
T 2gop_A          165 IEEFEK--P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDG--KEE-KMFEK-VSFYAV--DSDGERILLYGK  234 (347)
T ss_dssp             EEEEEE--E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETT--EEE-EEEEE-ESEEEE--EECSSCEEEEEC
T ss_pred             EeeecC--C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCC--ceE-EeccC-cceeeE--CCCCCEEEEEEc
Confidence            444422  3 78899999999 777775542       4566655422  222 22233 444444  999999988775


Q ss_pred             C--------CcEEEEEcccceEEEEEEc-CccEEE-EEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEE
Q psy17610        274 D--------GTCVLWDLIKSTRLIIMIL-PSMIMS-AAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCV  343 (515)
Q Consensus       274 d--------~~i~iwd~~~~~~~~~~~~-~~~~~~-~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~  343 (515)
                      +        ..|.+||  +++....... ...+.. +.|+ ++ .++++..++.+++| +.+++.. .+..+ ...+.++
T Consensus       235 ~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~-~~~~~-~~~v~~~  307 (347)
T 2gop_A          235 PEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIK-PIAKG-RHWIMGF  307 (347)
T ss_dssp             CSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEE-EEECS-SSEEEEE
T ss_pred             cccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceE-EEecC-CCeEEee
Confidence            4        3678888  4544333222 345665 8899 88 88888899999999 7766553 33333 3788999


Q ss_pred             EEcCCCCEEEEEcCCCeE-EEEEccCCeeeeeccCCCC
Q psy17610        344 DFVDDGKYFLTGGADQIV-KMWMYREGVPCFVGIGHAA  380 (515)
Q Consensus       344 ~~~~~~~~l~~~~~dg~i-~i~d~~~~~~~~~~~~~~~  380 (515)
                      +|+|  .++++++.++.. .+|.+. ++ ...+..|..
T Consensus       308 ~~s~--~~~~~~~~~~~~~~l~~~~-g~-~~~lt~~n~  341 (347)
T 2gop_A          308 DVDE--IVVYLKETATRLRELFTWD-GE-EKQLTDYND  341 (347)
T ss_dssp             EESS--SEEEEEECSSSCCEEEEES-SS-EEECCCTTS
T ss_pred             eeeC--cEEEEEcCCCChHHheEeC-Cc-EEEeccccH
Confidence            9999  677777766654 777765 44 344555544

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.84  E-value=3.4e-18  Score=154.60  Aligned_cols=241  Identities=14%  Similarity=0.090  Sum_probs=186.8

Q ss_pred             eEEEEEEEeeCCCEEEEEeCC------------------------CeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCC
Q psy17610        167 MICACIVFTYDGKAILSGWND------------------------GFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGT  222 (515)
Q Consensus       167 ~~v~~~~~~~~~~~l~~~~~d------------------------g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  222 (515)
                      ..+.+++++|+|+.+++...+                        +.|.+||..+++........+-..+..++++|+|+
T Consensus        24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~  103 (329)
T 3fvz_A           24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGN  103 (329)
T ss_dssp             SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSC
T ss_pred             CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCC
Confidence            457899999999988887766                        47999999999988776445666889999999999


Q ss_pred             EEEEecCCCcEEEEEccCCceeeEEee---------ccccCceEEEEEec-CCCEEEEEe-CCCcEEEEEcccceEEEEE
Q psy17610        223 RLLSGGGEGQVRIWKLTRESQSLQCVL---------KEHTSSVSVIQIKS-DSKEAMSAS-TDGTCVLWDLIKSTRLIIM  291 (515)
Q Consensus       223 ~l~~~~~d~~i~iw~~~~~~~~~~~~~---------~~~~~~v~~~~~~~-~~~~l~~~~-~d~~i~iwd~~~~~~~~~~  291 (515)
                      ++++...++.|++|+..... .....+         .++......++++| ++..+++.+ .++.|++|+ .+++.+..+
T Consensus       104 l~v~d~~~~~v~~~~~~g~~-~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~  181 (329)
T 3fvz_A          104 YWVTDVALHQVFKLDPHSKE-GPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQW  181 (329)
T ss_dssp             EEEEETTTTEEEEECTTCSS-CCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEE
T ss_pred             EEEEECCCCEEEEEeCCCCe-EEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEe
Confidence            88888889999999975321 122223         23445688999999 777777776 689999999 456666555


Q ss_pred             EcC-----------ccEEEEEEcCC-CcEEEEEECCCeEEEEeCCCCceEEEEecC-CCccEEEEEEcCCCCEEEE----
Q psy17610        292 ILP-----------SMIMSAAYHPS-EVQLITCSTNKMIDYWETCDGSIIRSLEGS-DVAAVNCVDFVDDGKYFLT----  354 (515)
Q Consensus       292 ~~~-----------~~~~~~~~~~~-~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~----  354 (515)
                      ...           ..+..++++|+ +..+++...++.|++||..+++.+..+... ....+..++++| +..+++    
T Consensus       182 ~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~  260 (329)
T 3fvz_A          182 GEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKP  260 (329)
T ss_dssp             CEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCC
T ss_pred             ccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCE
Confidence            321           13789999998 677777777899999999989998888543 225678899999 433333    


Q ss_pred             ---EcCCCeEEEEEccCCeeeeec---cCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCC
Q psy17610        355 ---GGADQIVKMWMYREGVPCFVG---IGHAASITKIKISPDKKVIVSVSADGGIFLWTFPE  410 (515)
Q Consensus       355 ---~~~dg~i~i~d~~~~~~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~  410 (515)
                         ...+..|++|+..+++.+..+   .++...+..++++|+|.++++...++.|++|++..
T Consensus       261 ~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~  322 (329)
T 3fvz_A          261 YFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE  322 (329)
T ss_dssp             CTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred             EeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence               334558999999999888876   36677799999999998888888899999999754

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.84  E-value=1.3e-17  Score=148.01  Aligned_cols=240  Identities=13%  Similarity=0.130  Sum_probs=180.5

Q ss_pred             cCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEe------cCeEEEEEEEe-eCCCEEEEEeC-CCeEEEE
Q psy17610        122 CHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISV------MNMICACIVFT-YDGKAILSGWN-DGFIRCF  193 (515)
Q Consensus       122 ~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~------~~~~v~~~~~~-~~~~~l~~~~~-dg~i~~~  193 (515)
                      ++...+.+++++|++..+++...++.|.+||.+ ++.+..+..      +...+..+++. ++++.+++... ++.|.+|
T Consensus        27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~  105 (286)
T 1q7f_A           27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY  105 (286)
T ss_dssp             TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred             CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence            456678999999999877777778999999987 666665542      22457889995 66665555533 7899999


Q ss_pred             ecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeec--cccCceEEEEEecCCCEEEEE
Q psy17610        194 TPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLK--EHTSSVSVIQIKSDSKEAMSA  271 (515)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~  271 (515)
                      | .+++....+...+...+..++++++|+++++...++.|.+|+...   .....+.  .+...+..++++++++.+++.
T Consensus       106 d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g---~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~  181 (286)
T 1q7f_A          106 N-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNG---NVLHKFGCSKHLEFPNGVVVNDKQEIFISD  181 (286)
T ss_dssp             C-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTS---CEEEEEECTTTCSSEEEEEECSSSEEEEEE
T ss_pred             C-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCC---CEEEEeCCCCccCCcEEEEECCCCCEEEEE
Confidence            9 567776666445556789999999999888878889999999642   2222332  345568999999999877777


Q ss_pred             eCCCcEEEEEcccceEEEEEEcC---ccEEEEEEcCCCcEEEEEECCC-eEEEEeCCCCceEEEEecCCC-ccEEEEEEc
Q psy17610        272 STDGTCVLWDLIKSTRLIIMILP---SMIMSAAYHPSEVQLITCSTNK-MIDYWETCDGSIIRSLEGSDV-AAVNCVDFV  346 (515)
Q Consensus       272 ~~d~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~-~i~~~d~~~~~~~~~~~~~~~-~~i~~~~~~  346 (515)
                      ..++.|.+||.. ++.+..+...   ..+..++++++++.+++...++ .|.+||. +++.+..+..+.. ..+..++++
T Consensus       182 ~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~  259 (286)
T 1q7f_A          182 NRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALM  259 (286)
T ss_dssp             GGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEE
T ss_pred             CCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEEC
Confidence            778999999974 4555555443   4688999999999888887776 9999995 5677777765431 347799999


Q ss_pred             CCCCEEEEEcCCCeEEEEEccCC
Q psy17610        347 DDGKYFLTGGADQIVKMWMYREG  369 (515)
Q Consensus       347 ~~~~~l~~~~~dg~i~i~d~~~~  369 (515)
                      |+|+++++ +.++.|++|++...
T Consensus       260 ~~g~l~vs-~~~~~v~v~~~~~~  281 (286)
T 1q7f_A          260 DDGSVVLA-SKDYRLYIYRYVQL  281 (286)
T ss_dssp             TTTEEEEE-ETTTEEEEEECSCC
T ss_pred             CCCcEEEE-CCCCeEEEEEcccc
Confidence            99987777 56899999998654

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.84  E-value=1.8e-17  Score=147.05  Aligned_cols=239  Identities=9%  Similarity=0.052  Sum_probs=177.3

Q ss_pred             CCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEee-----ccCccCeEEEEe-CCCCcEEEEEec-CCcEEEEe
Q psy17610         80 DDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVN-----TCHTSAIYDLQF-PVNFSSVFATCS-KNDIRIWS  152 (515)
Q Consensus        80 ~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~-----~~h~~~v~~~~~-~~~~~~l~~~~~-d~~i~iw~  152 (515)
                      +-..+.+++++|+++++++...++.|.+||.+. .......     .+|...+..+++ .+++..+++... ++.|.+||
T Consensus        28 ~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g-~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d  106 (286)
T 1q7f_A           28 QFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEG-RFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN  106 (286)
T ss_dssp             CBSCEEEEEECTTCCEEEEEGGGTEEEEECTTS-CEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC
T ss_pred             ccCCCceEEECCCCCEEEEECCCCEEEEECCCC-cEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC
Confidence            456789999999999888888899999999874 4443332     134567899999 567655555433 88999999


Q ss_pred             CCCCceeEEEEe-cCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecC-CCCCCeEEEEEcCCCCEEEEecCC
Q psy17610        153 VRTLNELLRISV-MNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPN-AHNRGVTALAITQDGTRLLSGGGE  230 (515)
Q Consensus       153 ~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d  230 (515)
                       .+++.+..+.. +...+..++++|+|+.+++...++.|.+|+.. ++....+.. .+...+..++++++|+++++...+
T Consensus       107 -~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~  184 (286)
T 1q7f_A          107 -QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRA  184 (286)
T ss_dssp             -TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGG
T ss_pred             -CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCC
Confidence             56777666642 23467899999999977777778999999965 555544422 345678999999999988887888


Q ss_pred             CcEEEEEccCCceeeEEeecc--ccCceEEEEEecCCCEEEEEeCCC-cEEEEEcccceEEEEEEcCc---cEEEEEEcC
Q psy17610        231 GQVRIWKLTRESQSLQCVLKE--HTSSVSVIQIKSDSKEAMSASTDG-TCVLWDLIKSTRLIIMILPS---MIMSAAYHP  304 (515)
Q Consensus       231 ~~i~iw~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~-~i~iwd~~~~~~~~~~~~~~---~~~~~~~~~  304 (515)
                      +.|++||...   .....+..  +...+..++++++++++++...++ .|.+||. +++.+..+....   .+..++++|
T Consensus       185 ~~i~~~~~~g---~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~  260 (286)
T 1q7f_A          185 HCVKVFNYEG---QYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMD  260 (286)
T ss_dssp             TEEEEEETTC---CEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEET
T ss_pred             CEEEEEcCCC---CEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECC
Confidence            9999999742   23333332  335788999999998888887775 9999996 455555554332   377999999


Q ss_pred             CCcEEEEEECCCeEEEEeCCCC
Q psy17610        305 SEVQLITCSTNKMIDYWETCDG  326 (515)
Q Consensus       305 ~~~~l~~~~~~~~i~~~d~~~~  326 (515)
                      +++.+++ +.++.|++|+....
T Consensus       261 ~g~l~vs-~~~~~v~v~~~~~~  281 (286)
T 1q7f_A          261 DGSVVLA-SKDYRLYIYRYVQL  281 (286)
T ss_dssp             TTEEEEE-ETTTEEEEEECSCC
T ss_pred             CCcEEEE-CCCCeEEEEEcccc
Confidence            9986666 67999999997654

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.84  E-value=2.5e-16  Score=140.75  Aligned_cols=283  Identities=10%  Similarity=-0.001  Sum_probs=201.6

Q ss_pred             EEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCC
Q psy17610         75 LYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVR  154 (515)
Q Consensus        75 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~  154 (515)
                      ..+..+...+.+++++++|+++++...++.|.+||.. +.........+...+.++++++++..+++...++.|..||..
T Consensus         8 ~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~   86 (299)
T 2z2n_A            8 LNLTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK   86 (299)
T ss_dssp             EECCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred             EcCCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC
Confidence            3344466789999999999977766667899999988 443333333355779999999999777766668889999986


Q ss_pred             CCceeEEEEe--cCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCc
Q psy17610        155 TLNELLRISV--MNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQ  232 (515)
Q Consensus       155 ~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~  232 (515)
                       ++ ...+..  ....+..+++.++++.+++...++.|..||. +++........+...+..+++.++|+..++...++.
T Consensus        87 -g~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~  163 (299)
T 2z2n_A           87 -GI-IKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNA  163 (299)
T ss_dssp             -SC-EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTE
T ss_pred             -Cc-EEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCE
Confidence             33 333332  3456789999999987777777889999998 555543332334567899999999988887777789


Q ss_pred             EEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC---ccEEEEEEcCCCcEE
Q psy17610        233 VRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP---SMIMSAAYHPSEVQL  309 (515)
Q Consensus       233 i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~l  309 (515)
                      |..||. ...... .........+..++++++++..++...++.|..||. +++... +..+   ..+..++++++++.+
T Consensus       164 i~~~~~-~g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~~~~g~l~  239 (299)
T 2z2n_A          164 IGRITE-SGDITE-FKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITE-FKIPTPNARPHAITAGAGIDLW  239 (299)
T ss_dssp             EEEECT-TCCEEE-EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECSTTCEE
T ss_pred             EEEEcC-CCcEEE-eeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEE-EECCCCCCCceeEEECCCCCEE
Confidence            999997 332221 223334556789999999987776666789999998 665433 3333   468899999999866


Q ss_pred             EEEECCCeEEEEeCCCCceEEEEec-CCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCC
Q psy17610        310 ITCSTNKMIDYWETCDGSIIRSLEG-SDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREG  369 (515)
Q Consensus       310 ~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~  369 (515)
                      ++...++.|..||. +++ +..+.. .....+.++++ ++|++.++.. .+.+..++.+++
T Consensus       240 v~~~~~~~i~~~d~-~g~-~~~~~~~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~~  296 (299)
T 2z2n_A          240 FTEWGANKIGRLTS-NNI-IEEYPIQIKSAEPHGICF-DGETIWFAME-CDKIGKLTLIKD  296 (299)
T ss_dssp             EEETTTTEEEEEET-TTE-EEEEECSSSSCCEEEEEE-CSSCEEEEET-TTEEEEEEEC--
T ss_pred             EeccCCceEEEECC-CCc-eEEEeCCCCCCccceEEe-cCCCEEEEec-CCcEEEEEcCcc
Confidence            66657889999998 443 334432 22357889999 8888776655 567777777654

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.83  E-value=4.2e-18  Score=154.07  Aligned_cols=242  Identities=12%  Similarity=0.053  Sum_probs=180.5

Q ss_pred             CCcEEEEEEecCCCEEEEEecC------------------------ceEEEEECCCCceeEEeeccCccCeEEEEeCCCC
Q psy17610         81 DSGISSLQYNPVNNKVFVGTVN------------------------CEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNF  136 (515)
Q Consensus        81 ~~~v~~~~~s~~~~~l~~~~~d------------------------~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~  136 (515)
                      -+.+.+++++|+|+++++...+                        +.|.+||.++++.......++......++++|+|
T Consensus        23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g  102 (329)
T 3fvz_A           23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG  102 (329)
T ss_dssp             CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred             cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence            3779999999999998887766                        4799999998766554444566688999999999


Q ss_pred             cEEEEEecCCcEEEEeCCCCc-eeEEEE---------ecCeEEEEEEEee-CCCEEEEEe-CCCeEEEEecCCCceEEEe
Q psy17610        137 SSVFATCSKNDIRIWSVRTLN-ELLRIS---------VMNMICACIVFTY-DGKAILSGW-NDGFIRCFTPQSGKLKFII  204 (515)
Q Consensus       137 ~~l~~~~~d~~i~iw~~~~~~-~~~~~~---------~~~~~v~~~~~~~-~~~~l~~~~-~dg~i~~~~~~~~~~~~~~  204 (515)
                      +.+++...++.|++||..... .+..+.         .+-.....++++| ++..+++.+ .++.|++|+ .+++....+
T Consensus       103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~  181 (329)
T 3fvz_A          103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQW  181 (329)
T ss_dssp             CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEE
T ss_pred             CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEe
Confidence            877777778999999986442 455552         2223578999999 788777775 689999999 566666655


Q ss_pred             cC---------CCCCCeEEEEEcCC-CCEEEEecCCCcEEEEEccCCceeeEEee--ccccCceEEEEEec------CCC
Q psy17610        205 PN---------AHNRGVTALAITQD-GTRLLSGGGEGQVRIWKLTRESQSLQCVL--KEHTSSVSVIQIKS------DSK  266 (515)
Q Consensus       205 ~~---------~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iw~~~~~~~~~~~~~--~~~~~~v~~~~~~~------~~~  266 (515)
                      ..         .+-.....++++|+ +.++++...++.|++|+..+  ......+  ..+...+..++++|      +++
T Consensus       182 ~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~--G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~  259 (329)
T 3fvz_A          182 GEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDT--KEFVREIKHASFGRNVFAISYIPGFLFAVNGK  259 (329)
T ss_dssp             CEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTT--CCEEEEECCTTTTTCEEEEEEETTEEEEEECC
T ss_pred             ccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCC--CcEEEEEeccccCCCcceeeecCCEEEEeCCC
Confidence            21         12234889999998 77777778889999999853  3334443  45666788899998      333


Q ss_pred             EEEEEeCCCcEEEEEcccceEEEEEE----cCccEEEEEEcCCCcEEEEEECCCeEEEEeCCC
Q psy17610        267 EAMSASTDGTCVLWDLIKSTRLIIMI----LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCD  325 (515)
Q Consensus       267 ~l~~~~~d~~i~iwd~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~  325 (515)
                      ..++...+..|++|+..+++.+..+.    ....+..++++|++..+++...++.|++|++..
T Consensus       260 ~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~  322 (329)
T 3fvz_A          260 PYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE  322 (329)
T ss_dssp             CCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred             EEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence            22233345589999999999888774    234589999999998888888899999998643

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.83  E-value=1.1e-17  Score=153.01  Aligned_cols=257  Identities=11%  Similarity=0.097  Sum_probs=178.1

Q ss_pred             CCeEEEEEcCCCCEEEEec---------CCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCC---C--
Q psy17610        210 RGVTALAITQDGTRLLSGG---------GEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTD---G--  275 (515)
Q Consensus       210 ~~v~~~~~~~~~~~l~~~~---------~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~--  275 (515)
                      ..+....+  +|+.++...         .++.|.+||+......   .+    ..+..+.|+|||++|+..+.+   +  
T Consensus        15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~---~l----~~~~~~~~SpDg~~la~~~~~~~~~~~   85 (347)
T 2gop_A           15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARR---FI----ENATMPRISPDGKKIAFMRANEEKKVS   85 (347)
T ss_dssp             CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE---EE----ESCEEEEECTTSSEEEEEEEETTTTEE
T ss_pred             EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceE---Ec----ccCCCeEECCCCCEEEEEEeccCCCcc
Confidence            34566677  788777542         2567899998644322   22    467889999999999887754   2  


Q ss_pred             cEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECC---------------------------CeEEEEeCCCCce
Q psy17610        276 TCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTN---------------------------KMIDYWETCDGSI  328 (515)
Q Consensus       276 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---------------------------~~i~~~d~~~~~~  328 (515)
                      .|.+|++.+++.......+. +..++|+|+++.|+.++.+                           ..|++||+.+++.
T Consensus        86 ~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~  164 (347)
T 2gop_A           86 EIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEV  164 (347)
T ss_dssp             EEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEE
T ss_pred             eEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeE
Confidence            48888998888777666666 9999999999998887632                           5799999998877


Q ss_pred             EEEEecCCCccEEEEEEcCCCCEEEEEcCCC-------eEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCC-
Q psy17610        329 IRSLEGSDVAAVNCVDFVDDGKYFLTGGADQ-------IVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSAD-  400 (515)
Q Consensus       329 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-------~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-  400 (515)
                      +..+.. .  .+..++|+|+| +++++..++       ...+|.+.+++. ..+..+ ..+..+  +|||++|+.++.+ 
T Consensus       165 ~~~l~~-~--~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~l~~~-~~~~~~--spdg~~l~~~~~~~  236 (347)
T 2gop_A          165 IEEFEK-P--RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE-EKMFEK-VSFYAV--DSDGERILLYGKPE  236 (347)
T ss_dssp             EEEEEE-E--TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE-EEEEEE-ESEEEE--EECSSCEEEEECCS
T ss_pred             EeeecC-C--CcccccCCCCe-EEEEEecccccccccccccEEEeCCCce-EEeccC-cceeeE--CCCCCEEEEEEccc
Confidence            455544 2  67789999999 777775542       344544445443 333334 455544  9999998887754 


Q ss_pred             -------CcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEE-eeeccCCcEEEEeecCCeEEEEecCC
Q psy17610        401 -------GGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMS-AAYHPSEVQLITCSTNKMIDYWETCD  472 (515)
Q Consensus       401 -------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~s~~~~~l~~~~~dg~v~iwd~~~  472 (515)
                             ..|.+||  ..+.                    ......+...+.. +.|+ ++ ++++++.++.+++| +.+
T Consensus       237 ~~~~~~~~~l~~~d--~~~~--------------------~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~  291 (347)
T 2gop_A          237 KKYMSEHNKLYIYD--GKEV--------------------MGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWD  291 (347)
T ss_dssp             SSCCCSSCEEEEEC--SSCE--------------------EESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EES
T ss_pred             cCCccccceEEEEC--CCce--------------------EeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcC
Confidence                   3577776  2110                    0011122344665 8899 88 88999999999999 887


Q ss_pred             CeeeeeecccccceEEEEEEcCCCcEEEEeecCCeE-EEEEE
Q psy17610        473 GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIV-KICLY  513 (515)
Q Consensus       473 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v-~iw~~  513 (515)
                      ++....+. +. ..|.+++|+|  .++++++.++.. .+|.+
T Consensus       292 g~~~~~~~-~~-~~v~~~~~s~--~~~~~~~~~~~~~~l~~~  329 (347)
T 2gop_A          292 GEIKPIAK-GR-HWIMGFDVDE--IVVYLKETATRLRELFTW  329 (347)
T ss_dssp             SSEEEEEC-SS-SEEEEEEESS--SEEEEEECSSSCCEEEEE
T ss_pred             CceEEEec-CC-CeEEeeeeeC--cEEEEEcCCCChHHheEe
Confidence            76644443 33 7899999999  677777777765 88865

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=99.83  E-value=4.8e-17  Score=145.86  Aligned_cols=256  Identities=10%  Similarity=0.010  Sum_probs=182.7

Q ss_pred             EEEecCCCEEEEEe----------cCceEEEEECCCCceeEEeeccC------ccCeEEEEeCCCCcEEEEEec--CCcE
Q psy17610         87 LQYNPVNNKVFVGT----------VNCEIFLIDMNSGFTLTLVNTCH------TSAIYDLQFPVNFSSVFATCS--KNDI  148 (515)
Q Consensus        87 ~~~s~~~~~l~~~~----------~d~~i~iw~~~~~~~~~~~~~~h------~~~v~~~~~~~~~~~l~~~~~--d~~i  148 (515)
                      +++||||++++++.          .++.|.+||..+.+....+.-+.      ...-..++|+|||++++++..  ++.|
T Consensus        83 va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~V  162 (386)
T 3sjl_D           83 PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAV  162 (386)
T ss_dssp             EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEE
T ss_pred             EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeE
Confidence            99999999988875          35789999999976555543221      124567999999999998874  6899


Q ss_pred             EEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCC-CceEEEec---CCCCCCeE-EEEEc-CCCC
Q psy17610        149 RIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQS-GKLKFIIP---NAHNRGVT-ALAIT-QDGT  222 (515)
Q Consensus       149 ~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~-~~~~~~~~---~~~~~~v~-~~~~~-~~~~  222 (515)
                      .++|+.+++.+.++.....   ...+....+.+++.+.||.+.+.++.+ ++......   .....++. ...|. ++|+
T Consensus       163 sVID~~t~~vv~tI~v~g~---~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~  239 (386)
T 3sjl_D          163 GVVDLEGKAFKRMLDVPDC---YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGR  239 (386)
T ss_dssp             EEEETTTTEEEEEEECCSE---EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTE
T ss_pred             EEEECCCCcEEEEEECCCc---ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCc
Confidence            9999999999988865432   223444456777888899999999876 55533221   11112221 23564 5775


Q ss_pred             EEEEecCCCcEEEEEccCCceeeEEeec----------cccCceEEEEEecCCCEEEEEeC----------CCcEEEEEc
Q psy17610        223 RLLSGGGEGQVRIWKLTRESQSLQCVLK----------EHTSSVSVIQIKSDSKEAMSAST----------DGTCVLWDL  282 (515)
Q Consensus       223 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~----------~~~~~v~~~~~~~~~~~l~~~~~----------d~~i~iwd~  282 (515)
                      +++ .+.+|.+.+.|...........+.          -.......++++++++.++....          ..+|.+.|+
T Consensus       240 ~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~  318 (386)
T 3sjl_D          240 LVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDA  318 (386)
T ss_dssp             EEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEET
T ss_pred             EEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEEC
Confidence            544 556799999998654433332221          11234456788999998887653          257999999


Q ss_pred             ccceEEEEEEcCccEEEEEEcCCCc-EEEEEE-CCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCC
Q psy17610        283 IKSTRLIIMILPSMIMSAAYHPSEV-QLITCS-TNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDD  348 (515)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~  348 (515)
                      .+.+.+..+.....+.+++++++++ +|++.. .++.|.++|..+++.+.++...  ...+.|.+++|
T Consensus       319 ~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~--~~p~~l~~s~d  384 (386)
T 3sjl_D          319 KTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL--GHGPQVITTAD  384 (386)
T ss_dssp             TTCCEEEEEEEEEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCC--CSSCCEEEECC
T ss_pred             CCCeEEEEEECCCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCC--CCCceeEECCc
Confidence            9999999999888999999999997 666654 4899999999999999999866  34455666665

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.82  E-value=1.7e-17  Score=150.83  Aligned_cols=270  Identities=13%  Similarity=0.046  Sum_probs=191.6

Q ss_pred             CCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeE
Q psy17610         81 DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELL  160 (515)
Q Consensus        81 ~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~  160 (515)
                      ...|.+++|+|++..++....++.++.|.   +.... .+..+...+.+++|+|+++.+++...++.|.+||.++++...
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~   80 (333)
T 2dg1_A            5 QQDLPTLFYSGKSNSAVPIISESELQTIT---AEPWL-EISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKR   80 (333)
T ss_dssp             -CCCCBCCSCGGGGCSSCCCCGGGSCEEE---CEEEE-EEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEE
T ss_pred             ccccceeeecCCccceeEEeecccCcccc---cceeE-EEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEE
Confidence            34577889999888777777788899992   23333 334466678999999999866677778999999998877655


Q ss_pred             EEEecCeEEEEEEEeeCCCEEEEEeCC----CeEEEEecCCCceEEEec-CCCCCCeEEEEEcCCCCEEEEecC------
Q psy17610        161 RISVMNMICACIVFTYDGKAILSGWND----GFIRCFTPQSGKLKFIIP-NAHNRGVTALAITQDGTRLLSGGG------  229 (515)
Q Consensus       161 ~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~------  229 (515)
                      ....+...+.+++++|+++++++...+    +.|.+||.++++....+. ..+...+..++++|+|+++++...      
T Consensus        81 ~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~  160 (333)
T 2dg1_A           81 PFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNP  160 (333)
T ss_dssp             EEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBC
T ss_pred             EeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCC
Confidence            444556778999999999977777666    689999998887654332 234567899999999987776653      


Q ss_pred             CCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEE-eCCCcEEEEEccc-ceEEE------EEEcC--ccEEE
Q psy17610        230 EGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSA-STDGTCVLWDLIK-STRLI------IMILP--SMIMS  299 (515)
Q Consensus       230 d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~-~~~~~------~~~~~--~~~~~  299 (515)
                      .+.|..++..  ...... +..+...+..++|+|+++.++.+ ..++.|.+||+.+ +....      .....  ..+..
T Consensus       161 ~~~l~~~~~~--~~~~~~-~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~  237 (333)
T 2dg1_A          161 LGGVYYVSPD--FRTVTP-IIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDS  237 (333)
T ss_dssp             CEEEEEECTT--SCCEEE-EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEE
T ss_pred             CceEEEEeCC--CCEEEE-eecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCc
Confidence            2445555543  222222 22334457889999999866544 5578999999853 22111      11122  36788


Q ss_pred             EEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCC-----ccEEEEEEcCCCCEEEEEcCC
Q psy17610        300 AAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDV-----AAVNCVDFVDDGKYFLTGGAD  358 (515)
Q Consensus       300 ~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~l~~~~~d  358 (515)
                      ++++++++.+++...++.|.+||. .++.+..+..+..     ..+.+++|+|+++.|++++.+
T Consensus       238 i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~  300 (333)
T 2dg1_A          238 CCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND  300 (333)
T ss_dssp             EEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred             eEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence            999999998888888899999998 5777777765431     157899999998777666554

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.81  E-value=1.9e-16  Score=142.85  Aligned_cols=276  Identities=8%  Similarity=-0.015  Sum_probs=195.8

Q ss_pred             CCCeEEEEecCCCceEEEecC-----CCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEE
Q psy17610        186 NDGFIRCFTPQSGKLKFIIPN-----AHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQ  260 (515)
Q Consensus       186 ~dg~i~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~  260 (515)
                      .++.|.++|.++++....+..     ........+.+. +++.+++...++.|.+||..+  .+....+. .......++
T Consensus        15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t--~~~~~~i~-~~~~p~~i~   90 (328)
T 3dsm_A           15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINT--FKEVGRIT-GFTSPRYIH   90 (328)
T ss_dssp             CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTT--CCEEEEEE-CCSSEEEEE
T ss_pred             CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcc--cEEEEEcC-CCCCCcEEE
Confidence            378999999999987654421     122446778775 345556666679999999954  44444443 345678899


Q ss_pred             EecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCc------cEEEEEEcCCCcEEEEEE--CCCeEEEEeCCCCceEEEE
Q psy17610        261 IKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPS------MIMSAAYHPSEVQLITCS--TNKMIDYWETCDGSIIRSL  332 (515)
Q Consensus       261 ~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~~--~~~~i~~~d~~~~~~~~~~  332 (515)
                      ++++++.+++...++.|.+||..+++....+....      ....+++  ++..++++.  .++.|.++|+.+++.+..+
T Consensus        91 ~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i  168 (328)
T 3dsm_A           91 FLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDEL  168 (328)
T ss_dssp             EEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEE
T ss_pred             EeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEE
Confidence            99998544444478999999999999887777665      6667777  344555554  4889999999999988888


Q ss_pred             ecCCCccEEEEEEcCCCCEEEEEcCC----------CeEEEEEccCCeeeeeccCC-CCCeeEEEECCCCcEEEEEeCCC
Q psy17610        333 EGSDVAAVNCVDFVDDGKYFLTGGAD----------QIVKMWMYREGVPCFVGIGH-AASITKIKISPDKKVIVSVSADG  401 (515)
Q Consensus       333 ~~~~~~~i~~~~~~~~~~~l~~~~~d----------g~i~i~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~dg  401 (515)
                      ...  .....++++|+|+++++...+          +.|.++|..+++....+... ......++++|++++|+++..  
T Consensus       169 ~~g--~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--  244 (328)
T 3dsm_A          169 TIG--IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--  244 (328)
T ss_dssp             ECS--SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--
T ss_pred             EcC--CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--
Confidence            764  345688999999977776654          78999999988877665432 236899999999999988765  


Q ss_pred             cEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccC-CcEEEEe----ecCCeEEEEecCCCeee
Q psy17610        402 GIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPS-EVQLITC----STNKMIDYWETCDGSII  476 (515)
Q Consensus       402 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~----~~dg~v~iwd~~~~~~~  476 (515)
                      .|.+||..+.+......  ..                ........++++|+ +...++.    ..++.|.+||.. ++.+
T Consensus       245 ~v~~~d~~t~~~~~~~~--~~----------------~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~  305 (328)
T 3dsm_A          245 DIWRMPVEADRVPVRPF--LE----------------FRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLI  305 (328)
T ss_dssp             SEEEEETTCSSCCSSCS--BC----------------CCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEE
T ss_pred             EEEEEECCCCceeeeee--ec----------------CCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEE
Confidence            89999987654210000  00                01234788999995 5555554    568899999987 9888


Q ss_pred             eeecccccceEEEEEE
Q psy17610        477 RSLEGSDVAAVNCVDF  492 (515)
Q Consensus       477 ~~~~~~~~~~v~~~~~  492 (515)
                      .++...  .....++|
T Consensus       306 ~~i~~G--~~P~~~~~  319 (328)
T 3dsm_A          306 DEFYVG--IIPGAFCW  319 (328)
T ss_dssp             EEEEEE--ESEEEEEE
T ss_pred             EEEEec--cCcceEEE
Confidence            887643  34455555

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.81  E-value=1.1e-16  Score=142.55  Aligned_cols=243  Identities=11%  Similarity=0.026  Sum_probs=175.7

Q ss_pred             EEecCCCcEEEEEEecCCC-EEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCC
Q psy17610         76 YLLKDDSGISSLQYNPVNN-KVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVR  154 (515)
Q Consensus        76 ~~~~~~~~v~~~~~s~~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~  154 (515)
                      .+..+.....+++|+|+++ +++++..++.|..|+..++  . ..+..+...+.+++++|+|+.+++...++.|.+||..
T Consensus        22 ~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~-~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~   98 (296)
T 3e5z_A           22 RLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--L-SPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREP   98 (296)
T ss_dssp             EEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--E-EEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECST
T ss_pred             EEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--e-EEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCC
Confidence            3445667788999999998 7788888999999999985  3 3334467789999999999876666667899999998


Q ss_pred             CCceeEEEEecC----eEEEEEEEeeCCCEEEEE----e-------------CCCeEEEEecCCCceEEEecCCCCCCeE
Q psy17610        155 TLNELLRISVMN----MICACIVFTYDGKAILSG----W-------------NDGFIRCFTPQSGKLKFIIPNAHNRGVT  213 (515)
Q Consensus       155 ~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~----~-------------~dg~i~~~~~~~~~~~~~~~~~~~~~v~  213 (515)
                      +++.........    ..+..++++|+|+.+++.    +             ..+.|..++.. ++... + ..+.....
T Consensus        99 ~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~-~-~~~~~~~~  175 (296)
T 3e5z_A           99 GGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSA-P-IRDRVKPN  175 (296)
T ss_dssp             TCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEE-E-ECCCSSEE
T ss_pred             CCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEE-e-ecCCCCCc
Confidence            877544332221    234578999999987763    2             13466667665 54433 3 34566789


Q ss_pred             EEEEcCCCCEEEEecCCCcEEEEEccC-Cce-eeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEE
Q psy17610        214 ALAITQDGTRLLSGGGEGQVRIWKLTR-ESQ-SLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIM  291 (515)
Q Consensus       214 ~~~~~~~~~~l~~~~~d~~i~iw~~~~-~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~  291 (515)
                      .++|+|+++.+++.+.++.|.+|++.. ... .....+..+...+..++++++|++.++.  ++.|.+||.. ++....+
T Consensus       176 gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~  252 (296)
T 3e5z_A          176 GLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRV  252 (296)
T ss_dssp             EEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEE
T ss_pred             cEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEE
Confidence            999999999887778889999999862 222 1122223345567789999999866655  7889999986 6677777


Q ss_pred             EcCccEEEEEE-cCCCcEEEEEECCCeEEEEeCCCCce
Q psy17610        292 ILPSMIMSAAY-HPSEVQLITCSTNKMIDYWETCDGSI  328 (515)
Q Consensus       292 ~~~~~~~~~~~-~~~~~~l~~~~~~~~i~~~d~~~~~~  328 (515)
                      ..+..+.+++| .|+++.|++++.+ .+..++..+.+.
T Consensus       253 ~~~~~~~~~~f~~~d~~~L~v~t~~-~l~~~~~~~~~~  289 (296)
T 3e5z_A          253 LTPQTTSNLCFGGPEGRTLYMTVST-EFWSIETNVRGL  289 (296)
T ss_dssp             ECSSCCCEEEEESTTSCEEEEEETT-EEEEEECSCCBC
T ss_pred             ECCCCceeEEEECCCCCEEEEEcCC-eEEEEEcccccc
Confidence            66655888999 5899988888875 455666666544

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.81  E-value=2.2e-15  Score=134.51  Aligned_cols=279  Identities=10%  Similarity=-0.003  Sum_probs=198.7

Q ss_pred             cCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEE--ecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCc
Q psy17610        122 CHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRIS--VMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGK  199 (515)
Q Consensus       122 ~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~  199 (515)
                      .+...+.+++++++|..+++...++.|.+||.. ++ ...+.  .....+..+++++++..+++...++.|..|+.. ++
T Consensus        12 ~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~   88 (299)
T 2z2n_A           12 NQDTGPYGITVSDKGKVWITQHKANMISCINLD-GK-ITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GI   88 (299)
T ss_dssp             SSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CC-EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred             CcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CC-eEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-Cc
Confidence            355678999999999876666668899999988 54 33333  234568899999999877777668899999986 44


Q ss_pred             eEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEE
Q psy17610        200 LKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVL  279 (515)
Q Consensus       200 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i  279 (515)
                      ............+..+++.++++++++...++.|..||.. .... ..........+..+++.+++...++...++.|..
T Consensus        89 ~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~-g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~  166 (299)
T 2z2n_A           89 IKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITDD-GKIR-EYELPNKGSYPSFITLGSDNALWFTENQNNAIGR  166 (299)
T ss_dssp             EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEE-EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred             EEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECCC-CCEE-EecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEE
Confidence            3222212345678999999999888877778899999973 2222 2223334556889999999987777767789999


Q ss_pred             EEcccceEEEEEE--cCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcC
Q psy17610        280 WDLIKSTRLIIMI--LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA  357 (515)
Q Consensus       280 wd~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~  357 (515)
                      ||. +++......  ....+..+++.+++..+++...++.|..||. +++............+.+++++++|+++++...
T Consensus       167 ~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~  244 (299)
T 2z2n_A          167 ITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWG  244 (299)
T ss_dssp             ECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETT
T ss_pred             EcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccC
Confidence            998 655443211  1235789999999997777667889999999 666443212223367889999999997777667


Q ss_pred             CCeEEEEEccCCeeee-eccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCC
Q psy17610        358 DQIVKMWMYREGVPCF-VGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPE  410 (515)
Q Consensus       358 dg~i~i~d~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~  410 (515)
                      ++.|..||. +++... ....+...+.++++ +++++.++.. .+.+..++..+
T Consensus       245 ~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~  295 (299)
T 2z2n_A          245 ANKIGRLTS-NNIIEEYPIQIKSAEPHGICF-DGETIWFAME-CDKIGKLTLIK  295 (299)
T ss_dssp             TTEEEEEET-TTEEEEEECSSSSCCEEEEEE-CSSCEEEEET-TTEEEEEEEC-
T ss_pred             CceEEEECC-CCceEEEeCCCCCCccceEEe-cCCCEEEEec-CCcEEEEEcCc
Confidence            889999998 444322 23445567899999 8888776654 56777777654

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=99.81  E-value=1e-16  Score=143.66  Aligned_cols=292  Identities=12%  Similarity=0.083  Sum_probs=205.1

Q ss_pred             EEEecCCCEEEEEec-----CceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEe----------cCCcEEEE
Q psy17610         87 LQYNPVNNKVFVGTV-----NCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATC----------SKNDIRIW  151 (515)
Q Consensus        87 ~~~s~~~~~l~~~~~-----d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~----------~d~~i~iw  151 (515)
                      ....|+++.+++...     ++.|.++|..+++.+..+..+ ..+  .++++|||++++++.          .++.|.+|
T Consensus        38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG-~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~Vsvi  114 (386)
T 3sjl_D           38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGG-FLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVF  114 (386)
T ss_dssp             CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEEC-SSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred             eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECC-CCC--cEEECCCCCEEEEEcccccccccCCCCCEEEEE
Confidence            455789999888865     679999999997665555443 334  499999999998876          25789999


Q ss_pred             eCCCCceeEEEEecC-------eEEEEEEEeeCCCEEEEEeC--CCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCC
Q psy17610        152 SVRTLNELLRISVMN-------MICACIVFTYDGKAILSGWN--DGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGT  222 (515)
Q Consensus       152 ~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~~~--dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  222 (515)
                      |..+++.+.++....       .....++|+|||++++++..  ++.|.++|+.+++.+.++..+.   . ...+....+
T Consensus       115 D~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g---~-~~~~P~g~~  190 (386)
T 3sjl_D          115 DPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD---C-YHIFPTAPD  190 (386)
T ss_dssp             CTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS---E-EEEEEEETT
T ss_pred             ECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC---c-ceeecCCCc
Confidence            999999998886532       13456899999999998864  6899999999999988884322   1 222333455


Q ss_pred             EEEEecCCCcEEEEEccCCceeeEEeeccc----cCceE-EEEEe-cCCCEEEEEeCCCcEEEEEcccce--EEEEEE--
Q psy17610        223 RLLSGGGEGQVRIWKLTRESQSLQCVLKEH----TSSVS-VIQIK-SDSKEAMSASTDGTCVLWDLIKST--RLIIMI--  292 (515)
Q Consensus       223 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~----~~~v~-~~~~~-~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~--  292 (515)
                      .+++.+.||.+.+.++...... ......+    ..++. ...|. ++|+ ++..+.+|++.+.|+.+..  ....+.  
T Consensus       191 ~~~~~~~DG~~~~v~~~~~g~v-~~~~~~~~~~~~~~~~~~~~~~~~dG~-~~~vs~~g~V~v~d~~~~~~~v~~~~~~~  268 (386)
T 3sjl_D          191 TFFMHCRDGSLAKVAFGTEGTP-EITHTEVFHPEDEFLINHPAYSQKAGR-LVWPTYTGKIHQIDLSSGDAKFLPAVEAL  268 (386)
T ss_dssp             EEEEEETTSCEEEEECCSSSCC-EEEECCCCSCTTSCBCSCCEEETTTTE-EEEEBTTSEEEEEECTTSSCEECCCEESS
T ss_pred             eeEEECCCCCEEEEECCCCCeE-EEeecceeccccccccccceeEcCCCc-EEEEeCCCEEEEEECCCCcceeecceecc
Confidence            6777788888888887542111 1111111    12221 23554 5664 4446678999999997653  222222  


Q ss_pred             ---------cCccEEEEEEcCCCcEEEEEEC----------CCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCC-EE
Q psy17610        293 ---------LPSMIMSAAYHPSEVQLITCST----------NKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGK-YF  352 (515)
Q Consensus       293 ---------~~~~~~~~~~~~~~~~l~~~~~----------~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l  352 (515)
                               .+.....++++++++.+++...          ...|.++|+.+++.+..+...  ..+..+++++|++ +|
T Consensus       269 ~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg--~~~~~lavs~D~~~~l  346 (386)
T 3sjl_D          269 TEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG--HEIDSINVSQDEKPLL  346 (386)
T ss_dssp             CHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE--EEECEEEECSSSSCEE
T ss_pred             ccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC--CCcceEEECCCCCeEE
Confidence                     1223345777999998888653          257999999999999999876  4788999999997 66


Q ss_pred             EEE-cCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCC
Q psy17610        353 LTG-GADQIVKMWMYREGVPCFVGIGHAASITKIKISPD  390 (515)
Q Consensus       353 ~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~  390 (515)
                      ++. ..++.|.++|..+++.+.++..- ..-..|.+++|
T Consensus       347 y~tn~~~~~VsViD~~t~k~~~~i~~~-~~p~~l~~s~d  384 (386)
T 3sjl_D          347 YALSTGDKTLYIHDAESGEELRSVNQL-GHGPQVITTAD  384 (386)
T ss_dssp             EEEETTTTEEEEEETTTCCEEEEECCC-CSSCCEEEECC
T ss_pred             EEEcCCCCeEEEEECCCCcEEEEecCC-CCCceeEECCc
Confidence            664 45899999999999988877543 23345666655

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.81  E-value=8.5e-17  Score=161.43  Aligned_cols=276  Identities=10%  Similarity=0.056  Sum_probs=193.1

Q ss_pred             cCCCEEEEEecC-----ceEEEEECCCCceeEEe-----eccCccCeEEEEeCCCCcEEEEEecCC-----cEEEEeCCC
Q psy17610         91 PVNNKVFVGTVN-----CEIFLIDMNSGFTLTLV-----NTCHTSAIYDLQFPVNFSSVFATCSKN-----DIRIWSVRT  155 (515)
Q Consensus        91 ~~~~~l~~~~~d-----~~i~iw~~~~~~~~~~~-----~~~h~~~v~~~~~~~~~~~l~~~~~d~-----~i~iw~~~~  155 (515)
                      |+|++++....+     +.|++.+..++.....+     ..+|...+..++|||||++|+.+..++     .|++||+.+
T Consensus        81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t  160 (710)
T 2xdw_A           81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG  160 (710)
T ss_dssp             EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred             EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence            889888776543     24566565554322211     123445688999999999998887633     899999999


Q ss_pred             CceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCe----------------EEEEecCCCce--EEEec-CCCCCCeEEEE
Q psy17610        156 LNELLRISVMNMICACIVFTYDGKAILSGWNDGF----------------IRCFTPQSGKL--KFIIP-NAHNRGVTALA  216 (515)
Q Consensus       156 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~----------------i~~~~~~~~~~--~~~~~-~~~~~~v~~~~  216 (515)
                      ++.+.... ....+..++|+|||+.|+.++.++.                |++|++.+++.  ...+. ..|...+..+.
T Consensus       161 g~~~~~~~-~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~  239 (710)
T 2xdw_A          161 AKELPDVL-ERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAE  239 (710)
T ss_dssp             TEEEEEEE-EEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEE
T ss_pred             CCCCcccc-cCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEE
Confidence            88765322 2223567899999999999887765                99999988762  22221 23455688999


Q ss_pred             EcCCCCEEEEecC-----CCcEEEEEccC------CceeeEEeeccccCceEEEEEecCCCEEEEEeCC----CcEEEEE
Q psy17610        217 ITQDGTRLLSGGG-----EGQVRIWKLTR------ESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTD----GTCVLWD  281 (515)
Q Consensus       217 ~~~~~~~l~~~~~-----d~~i~iw~~~~------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~iwd  281 (515)
                      |+|||++|+..+.     +..|.+||+..      ... ....+..+...+.. .|+++|+.|+..+..    +.|.+||
T Consensus       240 ~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~-~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d  317 (710)
T 2xdw_A          240 LSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGIL-KWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINID  317 (710)
T ss_dssp             ECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC-CCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEE
T ss_pred             EcCCCCEEEEEEEccCCCccEEEEEECcccccccCCcc-ceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEe
Confidence            9999999987654     56899999864      211 23344455555554 588999988877653    3599999


Q ss_pred             cccceE---EEEEEcCc--cEEEEEEcCCCcEEEEEECCC--eEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEE
Q psy17610        282 LIKSTR---LIIMILPS--MIMSAAYHPSEVQLITCSTNK--MIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLT  354 (515)
Q Consensus       282 ~~~~~~---~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~--~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~  354 (515)
                      +.++..   ...+....  .+..+.+++++..+++...++  .|.+|++.+++.+..+..+ ...+..+.++|+++.++.
T Consensus       318 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~-~~~v~~~~~s~d~~~l~~  396 (710)
T 2xdw_A          318 FTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLE-VGSVVGYSGQKKDTEIFY  396 (710)
T ss_dssp             TTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCC-SSEEEEEECCTTCSEEEE
T ss_pred             CCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCC-CceEEEEecCCCCCEEEE
Confidence            987641   22333323  577888988788888888887  4667788788877788766 478889999999876664


Q ss_pred             E----cCCCeEEEEEccCCe
Q psy17610        355 G----GADQIVKMWMYREGV  370 (515)
Q Consensus       355 ~----~~dg~i~i~d~~~~~  370 (515)
                      .    ...+.++.||+.+++
T Consensus       397 ~~ss~~~P~~i~~~d~~tg~  416 (710)
T 2xdw_A          397 QFTSFLSPGIIYHCDLTKEE  416 (710)
T ss_dssp             EEECSSCCCEEEEEETTSSS
T ss_pred             EEeCCCCCCEEEEEECCCCc
Confidence            3    235789999998876

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=99.80  E-value=4.3e-15  Score=135.59  Aligned_cols=276  Identities=10%  Similarity=0.038  Sum_probs=194.2

Q ss_pred             EEecCCCEEEEEec--Cc---eEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec----------CCcEEEEe
Q psy17610         88 QYNPVNNKVFVGTV--NC---EIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS----------KNDIRIWS  152 (515)
Q Consensus        88 ~~s~~~~~l~~~~~--d~---~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~----------d~~i~iw~  152 (515)
                      ...|+++++++...  ..   .|.++|..+++.+..+.. ...+  .++++|||++++++..          ++.|.+||
T Consensus        27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~-g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD  103 (373)
T 2mad_H           27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNG-GFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFD  103 (373)
T ss_pred             cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecC-CCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEE
Confidence            44578887777653  22   889999999765544433 3333  9999999999999863          57899999


Q ss_pred             CCCCceeEEEEec-------CeEEEEEEEeeCCCEEEEEeC--CCeEEEEecCCCceEEE-ecCCCCCCeEEEEEcCCC-
Q psy17610        153 VRTLNELLRISVM-------NMICACIVFTYDGKAILSGWN--DGFIRCFTPQSGKLKFI-IPNAHNRGVTALAITQDG-  221 (515)
Q Consensus       153 ~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--dg~i~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~-  221 (515)
                      ..+++.+.++...       ......+.|+|||++|+++..  ++.|.++| .+++.... +..  ..   ++.+.|++ 
T Consensus       104 ~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~--~~---~~~~~~~~~  177 (373)
T 2mad_H          104 PVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSS--PT---CYHIHPGAP  177 (373)
T ss_pred             CCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCC--Cc---eEEEEeCCC
Confidence            9998888777543       122357899999999998874  47899999 99998877 632  22   24445544 


Q ss_pred             CEEEEecCCCcEEEEEccCCceeeEEe---eccccCc-eEEEEEecCCCEEEEEeCCCcEEEEEcccce--EEEEEEc--
Q psy17610        222 TRLLSGGGEGQVRIWKLTRESQSLQCV---LKEHTSS-VSVIQIKSDSKEAMSASTDGTCVLWDLIKST--RLIIMIL--  293 (515)
Q Consensus       222 ~~l~~~~~d~~i~iw~~~~~~~~~~~~---~~~~~~~-v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~--  293 (515)
                      +.+++.+.||.+.+++. .........   ......+ .....+.+++..++..+.++.+.+.|+....  ....+..  
T Consensus       178 ~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~  256 (373)
T 2mad_H          178 STFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALS  256 (373)
T ss_pred             ceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecC
Confidence            45667778999999998 443221111   0011112 1234566666666655678899999986543  2222211  


Q ss_pred             ---------CccEEEEEEcCCCcEEEEEEC----------CCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCC-EEE
Q psy17610        294 ---------PSMIMSAAYHPSEVQLITCST----------NKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGK-YFL  353 (515)
Q Consensus       294 ---------~~~~~~~~~~~~~~~l~~~~~----------~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~  353 (515)
                               +.....++++|+++.+++...          .+.|.++|+.+++.+.++...  .....++|+|||+ +++
T Consensus       257 ~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g--~~p~~i~~s~Dg~~~l~  334 (373)
T 2mad_H          257 GGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLG--HDVDAISVAQDGGPDLY  334 (373)
T ss_pred             CcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECC--CCcCeEEECCCCCeEEE
Confidence                     223445789999998887654          357999999999999999765  4578999999999 777


Q ss_pred             EEc-CCCeEEEEEccCCeeeeec
Q psy17610        354 TGG-ADQIVKMWMYREGVPCFVG  375 (515)
Q Consensus       354 ~~~-~dg~i~i~d~~~~~~~~~~  375 (515)
                      ++. .++.|.++|..+++.+..+
T Consensus       335 v~~~~~~~V~ViD~~t~~vv~~i  357 (373)
T 2mad_H          335 ALSAGTEVLHIYDAGAGDQDQST  357 (373)
T ss_pred             EEcCCCCeEEEEECCCCCEEeee
Confidence            776 4899999999999888773

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.80  E-value=1.3e-16  Score=160.06  Aligned_cols=276  Identities=11%  Similarity=0.022  Sum_probs=190.8

Q ss_pred             CCCcEEEEEecCC-----cEEEEeCCCCceeEEEE------ecCeEEEEEEEeeCCCEEEEEeCCC-----eEEEEecCC
Q psy17610        134 VNFSSVFATCSKN-----DIRIWSVRTLNELLRIS------VMNMICACIVFTYDGKAILSGWNDG-----FIRCFTPQS  197 (515)
Q Consensus       134 ~~~~~l~~~~~d~-----~i~iw~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~~~~~~~  197 (515)
                      |+|++++....++     .+.+.+...++....+.      ++...+..++|||||++|+.+..++     .|++||+.+
T Consensus        81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t  160 (710)
T 2xdw_A           81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG  160 (710)
T ss_dssp             EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred             EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence            7787777665422     23344443443322222      1334688999999999999776543     899999999


Q ss_pred             CceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCc----------------EEEEEccCCcee--eEEeeccccCceEEE
Q psy17610        198 GKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQ----------------VRIWKLTRESQS--LQCVLKEHTSSVSVI  259 (515)
Q Consensus       198 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~----------------i~iw~~~~~~~~--~~~~~~~~~~~v~~~  259 (515)
                      ++...... .+ ..+..++|+|||+.|+.++.++.                |++|++.+....  .+.....|...+..+
T Consensus       161 g~~~~~~~-~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~  238 (710)
T 2xdw_A          161 AKELPDVL-ER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGA  238 (710)
T ss_dssp             TEEEEEEE-EE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEE
T ss_pred             CCCCcccc-cC-cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEE
Confidence            98766432 12 23677999999999998887765                999999654432  222233355567889


Q ss_pred             EEecCCCEEEEEeC-----CCcEEEEEccc------ce-EEEEEEcC-ccEEEEEEcCCCcEEEEEECC----CeEEEEe
Q psy17610        260 QIKSDSKEAMSAST-----DGTCVLWDLIK------ST-RLIIMILP-SMIMSAAYHPSEVQLITCSTN----KMIDYWE  322 (515)
Q Consensus       260 ~~~~~~~~l~~~~~-----d~~i~iwd~~~------~~-~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~----~~i~~~d  322 (515)
                      .|+|||++|+..+.     +..|.+||+.+      +. ....+..+ ..... .++|+++.++..+..    ..|.+||
T Consensus       239 ~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d  317 (710)
T 2xdw_A          239 ELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINID  317 (710)
T ss_dssp             EECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEE
T ss_pred             EEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEe
Confidence            99999999987765     56899999986      42 23333333 33333 588899888777653    3699999


Q ss_pred             CCCCc--eEEEEecCCC-ccEEEEEEcCCCCEEEEEcCCCe--EEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEE
Q psy17610        323 TCDGS--IIRSLEGSDV-AAVNCVDFVDDGKYFLTGGADQI--VKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSV  397 (515)
Q Consensus       323 ~~~~~--~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~dg~--i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~  397 (515)
                      +.++.  ....+..+.. ..+..++|++++.++++...++.  |.+|++.+++....+..+...+..++++|+++.++..
T Consensus       318 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~  397 (710)
T 2xdw_A          318 FTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQ  397 (710)
T ss_dssp             TTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEE
T ss_pred             CCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEE
Confidence            98764  2344444432 36788999988888888888885  5666776777777777778889999999998766643


Q ss_pred             -e---CCCcEEEEeCCCCc
Q psy17610        398 -S---ADGGIFLWTFPELE  412 (515)
Q Consensus       398 -~---~dg~i~iw~~~~~~  412 (515)
                       +   ..+.+..||+.+.+
T Consensus       398 ~ss~~~P~~i~~~d~~tg~  416 (710)
T 2xdw_A          398 FTSFLSPGIIYHCDLTKEE  416 (710)
T ss_dssp             EECSSCCCEEEEEETTSSS
T ss_pred             EeCCCCCCEEEEEECCCCc
Confidence             2   34789999987654

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.79  E-value=2e-16  Score=140.93  Aligned_cols=245  Identities=9%  Similarity=-0.019  Sum_probs=175.0

Q ss_pred             CceeEEEEecCeEEEEEEEeeCCC-EEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEE
Q psy17610        156 LNELLRISVMNMICACIVFTYDGK-AILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVR  234 (515)
Q Consensus       156 ~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~  234 (515)
                      +..+..+..+.....+++|+|+++ .++++..++.|..|+..++  ...+ ..+...+.+++++++|+++++...++.|.
T Consensus        17 ~~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~-~~~~~~~~~l~~~~dg~l~v~~~~~~~i~   93 (296)
T 3e5z_A           17 GAEARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPE-MHPSHHQNGHCLNKQGHLIACSHGLRRLE   93 (296)
T ss_dssp             TCCCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEE-ESSCSSEEEEEECTTCCEEEEETTTTEEE
T ss_pred             CCcEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEE-ECCCCCcceeeECCCCcEEEEecCCCeEE
Confidence            334455555555668899999998 7778888999999999887  4444 35667799999999999888777778999


Q ss_pred             EEEccCCceeeEEe-ecc-ccCceEEEEEecCCCEEEEEeC-----------------CCcEEEEEcccceEEEEEEcCc
Q psy17610        235 IWKLTRESQSLQCV-LKE-HTSSVSVIQIKSDSKEAMSAST-----------------DGTCVLWDLIKSTRLIIMILPS  295 (515)
Q Consensus       235 iw~~~~~~~~~~~~-~~~-~~~~v~~~~~~~~~~~l~~~~~-----------------d~~i~iwd~~~~~~~~~~~~~~  295 (515)
                      +||..+........ ... ....+..++++|+|+++++.+.                 .+.|..++.. ++.........
T Consensus        94 ~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~  172 (296)
T 3e5z_A           94 RQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRV  172 (296)
T ss_dssp             EECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCS
T ss_pred             EEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCC
Confidence            99985443322211 111 1234678999999998887321                 3456666655 44444444445


Q ss_pred             cEEEEEEcCCCcEEEEEECCCeEEEEeCC-CCce---EEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCee
Q psy17610        296 MIMSAAYHPSEVQLITCSTNKMIDYWETC-DGSI---IRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVP  371 (515)
Q Consensus       296 ~~~~~~~~~~~~~l~~~~~~~~i~~~d~~-~~~~---~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~  371 (515)
                      ....++++|+++.+++...++.|.+|++. +++.   ...+ ......+..++++++|+++++.  ++.|.+|+.. ++.
T Consensus       173 ~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~  248 (296)
T 3e5z_A          173 KPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDE  248 (296)
T ss_dssp             SEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCE
T ss_pred             CCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCE
Confidence            67899999999999666778999999987 4554   3334 3233566789999999976666  7899999986 777


Q ss_pred             eeeccCCCCCeeEEEE-CCCCcEEEEEeCCCcEEEEeCCC
Q psy17610        372 CFVGIGHAASITKIKI-SPDKKVIVSVSADGGIFLWTFPE  410 (515)
Q Consensus       372 ~~~~~~~~~~i~~~~~-~~~~~~l~~~~~dg~i~iw~~~~  410 (515)
                      +..+..+.. +++++| +|+++.|++++.++ +.-++..+
T Consensus       249 ~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~  286 (296)
T 3e5z_A          249 LGRVLTPQT-TSNLCFGGPEGRTLYMTVSTE-FWSIETNV  286 (296)
T ss_dssp             EEEEECSSC-CCEEEEESTTSCEEEEEETTE-EEEEECSC
T ss_pred             EEEEECCCC-ceeEEEECCCCCEEEEEcCCe-EEEEEccc
Confidence            777777767 999999 68999898887763 44444433

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.79  E-value=1.3e-16  Score=139.40  Aligned_cols=214  Identities=13%  Similarity=0.110  Sum_probs=171.9

Q ss_pred             CcEEEEEecCCcEEEEeCCCCceeEEEEecC-eEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEE
Q psy17610        136 FSSVFATCSKNDIRIWSVRTLNELLRISVMN-MICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTA  214 (515)
Q Consensus       136 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~  214 (515)
                      ++.|++++.++.|.+||.++|+.+.++..+. ..+.++.++|+|+.++  +.++.|..||. +++.+..+..+....+.+
T Consensus         5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~   81 (276)
T 3no2_A            5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQT   81 (276)
T ss_dssp             CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEE
T ss_pred             CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccc
Confidence            4688888889999999999999999998766 4678899999999888  45778999999 899888885444457889


Q ss_pred             EEEcCCCCEEEEecC-CCcEEEEEccCCceeeEEeec------cccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceE
Q psy17610        215 LAITQDGTRLLSGGG-EGQVRIWKLTRESQSLQCVLK------EHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTR  287 (515)
Q Consensus       215 ~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~  287 (515)
                      +.+.++|+.+++.+. ++.+..+|.+   .+.+..+.      .+......+++.++|+++++...++.|..||.. ++.
T Consensus        82 ~~~~~dG~~lv~~~~~~~~v~~vd~~---Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~  157 (276)
T 3no2_A           82 ARILPDGNALVAWCGHPSTILEVNMK---GEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQL  157 (276)
T ss_dssp             EEECTTSCEEEEEESTTEEEEEECTT---SCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred             cEECCCCCEEEEecCCCCEEEEEeCC---CCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCE
Confidence            999999999998876 7777777753   22222221      222345566788999999999999999999998 999


Q ss_pred             EEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCC-----CccEEEEEEcCCCCEEEEEc
Q psy17610        288 LIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSD-----VAAVNCVDFVDDGKYFLTGG  356 (515)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~l~~~~  356 (515)
                      +..+..+..+.++...++++.++++..++.|..+|..+++.+.++....     ...+..++..++|+++++..
T Consensus       158 ~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~  231 (276)
T 3no2_A          158 LNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW  231 (276)
T ss_dssp             EEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred             EEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence            9998887777788889999999999989999999999999999987432     12367788888888887764

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.79  E-value=1.2e-16  Score=144.29  Aligned_cols=275  Identities=10%  Similarity=-0.083  Sum_probs=191.1

Q ss_pred             cCceEEEEECCCCceeEEeec-----cCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEe
Q psy17610        101 VNCEIFLIDMNSGFTLTLVNT-----CHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFT  175 (515)
Q Consensus       101 ~d~~i~iw~~~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~  175 (515)
                      .++.|.++|.++++....+..     ........+.+.. ++.+++...++.|.+||..+++.+.++.. ......++++
T Consensus        15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~-~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~~   92 (328)
T 3dsm_A           15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRD-GIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHFL   92 (328)
T ss_dssp             CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEET-TEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEEE
T ss_pred             CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEEC-CEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEEe
Confidence            378999999998654333221     1223467787753 34445555579999999999999888853 3456889999


Q ss_pred             eCCCEEEEEe-CCCeEEEEecCCCceEEEecCCCC----CCeEEEEEcCCCCEEEEec--CCCcEEEEEccCCceeeEEe
Q psy17610        176 YDGKAILSGW-NDGFIRCFTPQSGKLKFIIPNAHN----RGVTALAITQDGTRLLSGG--GEGQVRIWKLTRESQSLQCV  248 (515)
Q Consensus       176 ~~~~~l~~~~-~dg~i~~~~~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~--~d~~i~iw~~~~~~~~~~~~  248 (515)
                      ++++ +.++. .++.|.+||+.+++....+..+..    .....+++ . +..++++.  .++.|.++|+.+.  .....
T Consensus        93 ~~g~-lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~--~~~~~  167 (328)
T 3dsm_A           93 SDEK-AYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKIDTETD--KVVDE  167 (328)
T ss_dssp             ETTE-EEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEETTTT--EEEEE
T ss_pred             CCCe-EEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEECCCC--eEEEE
Confidence            9984 55555 789999999999998776643321    14556777 3 44455444  4789999998643  33333


Q ss_pred             eccccCceEEEEEecCCCEEEEEeCC----------CcEEEEEcccceEEEEEEcC--ccEEEEEEcCCCcEEEEEECCC
Q psy17610        249 LKEHTSSVSVIQIKSDSKEAMSASTD----------GTCVLWDLIKSTRLIIMILP--SMIMSAAYHPSEVQLITCSTNK  316 (515)
Q Consensus       249 ~~~~~~~v~~~~~~~~~~~l~~~~~d----------~~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~  316 (515)
                      +.. ......+.++|+|++++++..+          +.|.++|..+++....+..+  .....++++|+++.++++..  
T Consensus       168 i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--  244 (328)
T 3dsm_A          168 LTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--  244 (328)
T ss_dssp             EEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--
T ss_pred             EEc-CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--
Confidence            332 2335678899999877766554          78999999999887777654  36899999999999988765  


Q ss_pred             eEEEEeCCCCceEEE-EecCCCccEEEEEEcC-CCCEEEEE----cCCCeEEEEEccCCeeeeeccCCCCCeeEEEE
Q psy17610        317 MIDYWETCDGSIIRS-LEGSDVAAVNCVDFVD-DGKYFLTG----GADQIVKMWMYREGVPCFVGIGHAASITKIKI  387 (515)
Q Consensus       317 ~i~~~d~~~~~~~~~-~~~~~~~~i~~~~~~~-~~~~l~~~----~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~  387 (515)
                      .|.+||..+++.... +..........++++| +++++++.    ..++.|.+||.. ++.+..+.. ......++|
T Consensus       245 ~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~-G~~P~~~~~  319 (328)
T 3dsm_A          245 DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYV-GIIPGAFCW  319 (328)
T ss_dssp             SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEE-EESEEEEEE
T ss_pred             EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEEe-ccCcceEEE
Confidence            899999988875321 1111125678999999 56666666    568899999997 877776643 222344444

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.78  E-value=7.8e-15  Score=131.05  Aligned_cols=279  Identities=12%  Similarity=-0.014  Sum_probs=197.5

Q ss_pred             EecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCC
Q psy17610         77 LLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTL  156 (515)
Q Consensus        77 ~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~  156 (515)
                      +......+.+++++++|++.++...++.|.+||.. +.........+...+.++++.+++..+++...++.|..+|.. +
T Consensus        15 ~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g   92 (300)
T 2qc5_A           15 LSIPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-G   92 (300)
T ss_dssp             CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred             cCCCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-C
Confidence            33456789999999999977776678899999988 444333333344678999999998766666667889999987 5


Q ss_pred             ceeEEEEe--cCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEE
Q psy17610        157 NELLRISV--MNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVR  234 (515)
Q Consensus       157 ~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~  234 (515)
                      +. ..+..  ....+..+++.++++.+++...++.|..++.. ++............+..+++.++++..++...++.|.
T Consensus        93 ~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~  170 (300)
T 2qc5_A           93 GF-TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIG  170 (300)
T ss_dssp             CE-EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEE
T ss_pred             Ce-EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEE
Confidence            54 33332  33567899999999877777668899999988 6654332233456789999999999777666678899


Q ss_pred             EEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEE--cCccEEEEEEcCCCcEEEEE
Q psy17610        235 IWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMI--LPSMIMSAAYHPSEVQLITC  312 (515)
Q Consensus       235 iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~  312 (515)
                      .++.. .... ......+...+..++++++++..++....+.|..+|. +++......  ....+.++++.++++..++.
T Consensus       171 ~~~~~-g~~~-~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~  247 (300)
T 2qc5_A          171 RITNT-GKLE-EYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTE  247 (300)
T ss_dssp             EECTT-CCEE-EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEE
T ss_pred             EECCC-CcEE-EeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEec
Confidence            99873 2222 2223344556889999999887766666778999998 444333221  12458899999999876666


Q ss_pred             ECCCeEEEEeCCCCceEEEEecC-CCccEEEEEEcCCCCEEEEEcCCCeEEEEEc
Q psy17610        313 STNKMIDYWETCDGSIIRSLEGS-DVAAVNCVDFVDDGKYFLTGGADQIVKMWMY  366 (515)
Q Consensus       313 ~~~~~i~~~d~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~  366 (515)
                      ..++.|..+|. +++.. .+... ....+.++++.++|++.++.. . .|..+|.
T Consensus       248 ~~~~~i~~~~~-~g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p  298 (300)
T 2qc5_A          248 WGANQIGRITN-DNTIQ-EYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLNL  298 (300)
T ss_dssp             TTTTEEEEECT-TSCEE-EEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEEE
T ss_pred             cCCCeEEEECC-CCcEE-EEECCccCCccceeEeCCCCCEEEEcc-C-ceEEeCC
Confidence            66789999998 45433 33222 225678899999998666555 4 6766665

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=99.78  E-value=6.8e-15  Score=134.29  Aligned_cols=241  Identities=7%  Similarity=-0.048  Sum_probs=172.2

Q ss_pred             EEEEecCCCEEEEEe----------cCceEEEEECCCCceeEEeecc------CccCeEEEEeCCCCcEEEEEec--CCc
Q psy17610         86 SLQYNPVNNKVFVGT----------VNCEIFLIDMNSGFTLTLVNTC------HTSAIYDLQFPVNFSSVFATCS--KND  147 (515)
Q Consensus        86 ~~~~s~~~~~l~~~~----------~d~~i~iw~~~~~~~~~~~~~~------h~~~v~~~~~~~~~~~l~~~~~--d~~  147 (515)
                      .+++||||++|+++.          .++.|.+||..+.+....+..+      +...-..++|+|||++|+++..  ++.
T Consensus        70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~  149 (373)
T 2mad_H           70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA  149 (373)
T ss_pred             CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence            899999999999986          3578999999886555444322      0123458999999999999875  578


Q ss_pred             EEEEeCCCCceeEE-EEecCeEEEEEEEeeCC-CEEEEEeCCCeEEEEecCCCceEEEecC----CCCCC-eEEEEEcCC
Q psy17610        148 IRIWSVRTLNELLR-ISVMNMICACIVFTYDG-KAILSGWNDGFIRCFTPQSGKLKFIIPN----AHNRG-VTALAITQD  220 (515)
Q Consensus       148 i~iw~~~~~~~~~~-~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~~~~~~~~~~~~~~~----~~~~~-v~~~~~~~~  220 (515)
                      |.++| .+++.+.. +....    ++.+.|++ +.+++.+.||.+.+++. +++.......    ....+ .....+.++
T Consensus       150 v~viD-~t~~~~~~~i~~~~----~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~  223 (373)
T 2mad_H          150 VGLVV-QGGSSDDQLLSSPT----CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANK  223 (373)
T ss_pred             EEEEE-CCCCEEeEEcCCCc----eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEec
Confidence            99999 99988777 54322    24455665 45566778999999999 8776643210    11112 223456666


Q ss_pred             CCEEEEecCCCcEEEEEccCCceeeEEeecc----------ccCceEEEEEecCCCEEEEEeC----------CCcEEEE
Q psy17610        221 GTRLLSGGGEGQVRIWKLTRESQSLQCVLKE----------HTSSVSVIQIKSDSKEAMSAST----------DGTCVLW  280 (515)
Q Consensus       221 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~l~~~~~----------d~~i~iw  280 (515)
                      +..++..+..+.+.+.|+..........+.-          .......+.++|+++.++.+..          ++.|.++
T Consensus       224 ~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VI  303 (373)
T 2mad_H          224 SGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSV  303 (373)
T ss_pred             CCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEE
Confidence            6555555577889999985433222222211          1122445788999998887653          3579999


Q ss_pred             EcccceEEEEEEcCccEEEEEEcCCCc-EEEEEE-CCCeEEEEeCCCCceEEEE
Q psy17610        281 DLIKSTRLIIMILPSMIMSAAYHPSEV-QLITCS-TNKMIDYWETCDGSIIRSL  332 (515)
Q Consensus       281 d~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~-~~~~i~~~d~~~~~~~~~~  332 (515)
                      |..+.+.+..+........++|+||++ .++++. .++.|.++|+.+++.+..+
T Consensus       304 D~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i  357 (373)
T 2mad_H          304 TGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST  357 (373)
T ss_pred             ECCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence            999999999998888899999999999 677776 4899999999999998884

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.78  E-value=3.7e-17  Score=163.56  Aligned_cols=274  Identities=10%  Similarity=0.015  Sum_probs=187.3

Q ss_pred             CCCCcEEEEEecCC---cEEEEe--CCCCceeEEEE------ecCeEEEEEEEeeCCCEEEEE-----eCCCeEEEEecC
Q psy17610        133 PVNFSSVFATCSKN---DIRIWS--VRTLNELLRIS------VMNMICACIVFTYDGKAILSG-----WNDGFIRCFTPQ  196 (515)
Q Consensus       133 ~~~~~~l~~~~~d~---~i~iw~--~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~-----~~dg~i~~~~~~  196 (515)
                      +|+|++++....++   .-.+|-  ...++....+.      +|...+..++|||||++|+.+     +.+..|++||+.
T Consensus        76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~  155 (695)
T 2bkl_A           76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVD  155 (695)
T ss_dssp             EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETT
T ss_pred             EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECC
Confidence            47888888777643   344454  43444322222      234478999999999999843     334689999999


Q ss_pred             CCceEEEecCCCCCCe--EEEEEcCCCCEEEEecCCCc-------------EEEEEccCCce--eeEEeeccccCceEEE
Q psy17610        197 SGKLKFIIPNAHNRGV--TALAITQDGTRLLSGGGEGQ-------------VRIWKLTRESQ--SLQCVLKEHTSSVSVI  259 (515)
Q Consensus       197 ~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~~d~~-------------i~iw~~~~~~~--~~~~~~~~~~~~v~~~  259 (515)
                      +++...   ..+...+  ..++|+|||+.|+.++.|..             |++|++.+...  ..+.....+...+..+
T Consensus       156 tg~~~~---~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~  232 (695)
T 2bkl_A          156 SGEWSK---VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQS  232 (695)
T ss_dssp             TCCBCS---SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEE
T ss_pred             CCCCcC---CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEE
Confidence            988641   1121222  67899999999999888765             99999965543  2333444556678899


Q ss_pred             EEecCCCEEEEEeCCC----cEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEEC----CCeEEEEeCCCCce--E
Q psy17610        260 QIKSDSKEAMSASTDG----TCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCST----NKMIDYWETCDGSI--I  329 (515)
Q Consensus       260 ~~~~~~~~l~~~~~d~----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~i~~~d~~~~~~--~  329 (515)
                      .|+|||++++..+.++    .|.+|+..+++...............+ +++. ++..+.    ++.|.+||+.+++.  .
T Consensus       233 ~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~  310 (695)
T 2bkl_A          233 DLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASW  310 (695)
T ss_dssp             EECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGC
T ss_pred             EECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCC
Confidence            9999999998887666    677777665555444444445555555 5666 555443    57899999987653  2


Q ss_pred             EEEecCC-CccEEEEEEcCCCCEEEEEcCCCeEEEEEcc-CCeeeeeccCC-CCCeeEEEECCCCcEEEEEe----CCCc
Q psy17610        330 RSLEGSD-VAAVNCVDFVDDGKYFLTGGADQIVKMWMYR-EGVPCFVGIGH-AASITKIKISPDKKVIVSVS----ADGG  402 (515)
Q Consensus       330 ~~~~~~~-~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~----~dg~  402 (515)
                      ..+..+. ...+..++++ ++.++++...|+..++|.+. +++....+..+ ...+..++++|+++.++...    ..++
T Consensus       311 ~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~  389 (695)
T 2bkl_A          311 KEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQ  389 (695)
T ss_dssp             EEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEE
T ss_pred             eEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCE
Confidence            3333332 3567888888 67888888999988888665 35555555544 66788899999987776333    3478


Q ss_pred             EEEEeCCCCc
Q psy17610        403 IFLWTFPELE  412 (515)
Q Consensus       403 i~iw~~~~~~  412 (515)
                      |++||+.+.+
T Consensus       390 v~~~d~~~g~  399 (695)
T 2bkl_A          390 IYKTSVSTGK  399 (695)
T ss_dssp             EEEEETTTCC
T ss_pred             EEEEECCCCc
Confidence            9999987654

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.77  E-value=2.6e-17  Score=164.67  Aligned_cols=274  Identities=12%  Similarity=0.027  Sum_probs=184.2

Q ss_pred             ecCCCEEEEEecCc-----eEEEEECCCCceeEEee------ccCccCeEEEEeCCCCcEEEEEec-----CCcEEEEeC
Q psy17610         90 NPVNNKVFVGTVNC-----EIFLIDMNSGFTLTLVN------TCHTSAIYDLQFPVNFSSVFATCS-----KNDIRIWSV  153 (515)
Q Consensus        90 s~~~~~l~~~~~d~-----~i~iw~~~~~~~~~~~~------~~h~~~v~~~~~~~~~~~l~~~~~-----d~~i~iw~~  153 (515)
                      +|+|++++....++     .|++.+...+.. ..++      .+|...+..++|||||++|+.+..     +..|++||+
T Consensus        76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl  154 (695)
T 2bkl_A           76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQE-KVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDV  154 (695)
T ss_dssp             EEETTEEEEEEECTTCSSCEEEEEESTTSCC-EEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEET
T ss_pred             EEECCEEEEEEEcCCCeEEEEEEEcCCCCCc-EEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEEC
Confidence            37899888776543     355666555433 2232      245567999999999999986543     357999999


Q ss_pred             CCCcee-EEEEecCeEEEEEEEeeCCCEEEEEeCCCe-------------EEEEecCCCce--EEEec-CCCCCCeEEEE
Q psy17610        154 RTLNEL-LRISVMNMICACIVFTYDGKAILSGWNDGF-------------IRCFTPQSGKL--KFIIP-NAHNRGVTALA  216 (515)
Q Consensus       154 ~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-------------i~~~~~~~~~~--~~~~~-~~~~~~v~~~~  216 (515)
                      .+++.+ .. .........++|+|||+.|+.++.+..             |++|++.+++.  ...+. ..+...+..+.
T Consensus       155 ~tg~~~~~~-~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~  233 (695)
T 2bkl_A          155 DSGEWSKVD-VIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSD  233 (695)
T ss_dssp             TTCCBCSSC-CBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEE
T ss_pred             CCCCCcCCc-ccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEE
Confidence            998865 21 111111157899999999999988765             99999998762  22221 34556789999


Q ss_pred             EcCCCCEEEEecCCC----cEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeC----CCcEEEEEcccceE-
Q psy17610        217 ITQDGTRLLSGGGEG----QVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST----DGTCVLWDLIKSTR-  287 (515)
Q Consensus       217 ~~~~~~~l~~~~~d~----~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~i~iwd~~~~~~-  287 (515)
                      |+|+|++|+..+.++    .|.+++..  .... ..+..+...+....+ +++. ++..+.    ++.|.+||+.++.. 
T Consensus       234 ~SpDG~~l~~~~~~~~~~~~l~~~~~~--~~~~-~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~  308 (695)
T 2bkl_A          234 LSRDGKYLFVYILRGWSENDVYWKRPG--EKDF-RLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARA  308 (695)
T ss_dssp             ECTTSCCEEEEEEETTTEEEEEEECTT--CSSC-EEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGG
T ss_pred             ECCCCCEEEEEEeCCCCceEEEEEcCC--CCce-EEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCcc
Confidence            999999998877665    56666542  2222 233445555566556 5666 554443    57899999977642 


Q ss_pred             --EEEEEc--CccEEEEEEcCCCcEEEEEECCCeEEEEeCC-CCceEEEEecCCCccEEEEEEcCCCCEEEEEc----CC
Q psy17610        288 --LIIMIL--PSMIMSAAYHPSEVQLITCSTNKMIDYWETC-DGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGG----AD  358 (515)
Q Consensus       288 --~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~----~d  358 (515)
                        ...+..  ...+..++++ ++..+++...++..++|... +++....+..+....+..++++|+++.++...    ..
T Consensus       309 ~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P  387 (695)
T 2bkl_A          309 SWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTP  387 (695)
T ss_dssp             GCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEE
T ss_pred             CCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCC
Confidence              333333  2357778887 67778888888887777554 45566666655446778889999998777333    34


Q ss_pred             CeEEEEEccCCee
Q psy17610        359 QIVKMWMYREGVP  371 (515)
Q Consensus       359 g~i~i~d~~~~~~  371 (515)
                      +.|++||+.+++.
T Consensus       388 ~~v~~~d~~~g~~  400 (695)
T 2bkl_A          388 RQIYKTSVSTGKS  400 (695)
T ss_dssp             EEEEEEETTTCCE
T ss_pred             CEEEEEECCCCcE
Confidence            7899999988753

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.76  E-value=1.6e-15  Score=132.56  Aligned_cols=214  Identities=12%  Similarity=0.046  Sum_probs=168.8

Q ss_pred             CCCEEEEEeCCCcEEEEEcccceEEEEEEcCc--cEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEE
Q psy17610        264 DSKEAMSASTDGTCVLWDLIKSTRLIIMILPS--MIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVN  341 (515)
Q Consensus       264 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~  341 (515)
                      .++.+++++.++.|.+||.++++.+..+..+.  .+.++.+.|+++.++  +.++.+..||. +++.+.++..+....+.
T Consensus         4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~   80 (276)
T 3no2_A            4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQ   80 (276)
T ss_dssp             CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEE
T ss_pred             CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCcccc
Confidence            45788999999999999999999999988764  688999999999888  45788999999 89999999876445788


Q ss_pred             EEEEcCCCCEEEEEcC-CCeEEEEEccCCeeeeecc------CCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCc
Q psy17610        342 CVDFVDDGKYFLTGGA-DQIVKMWMYREGVPCFVGI------GHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDD  414 (515)
Q Consensus       342 ~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~------~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~  414 (515)
                      ++.+.++|+++++.+. ++.+..+|. +++.+..+.      .+......+++.++++++++...++.|..||.. ++..
T Consensus        81 ~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~  158 (276)
T 3no2_A           81 TARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLL  158 (276)
T ss_dssp             EEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEE
T ss_pred             ccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEE
Confidence            9999999999999887 778888886 666665543      222345667889999999999999999999976 4311


Q ss_pred             cCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccc-----cceEEE
Q psy17610        415 VGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSD-----VAAVNC  489 (515)
Q Consensus       415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~-----~~~v~~  489 (515)
                      ..                     ......+..+...++|+.++++..++.|..+|..+|+.+.++....     ...+..
T Consensus       159 w~---------------------~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~  217 (276)
T 3no2_A          159 NS---------------------VKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQ  217 (276)
T ss_dssp             EE---------------------EECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEE
T ss_pred             EE---------------------EECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCcccccccc
Confidence            00                     0001224456778999999999988899999999999988886432     133788


Q ss_pred             EEEcCCCcEEEEee
Q psy17610        490 VDFVDDGKYFLTGG  503 (515)
Q Consensus       490 ~~~s~~~~~l~s~~  503 (515)
                      ++..++|+.+++..
T Consensus       218 ~~~~~~G~i~v~~~  231 (276)
T 3no2_A          218 LFPLQNGGLYICNW  231 (276)
T ss_dssp             EEECTTSCEEEEEE
T ss_pred             ceEcCCCCEEEEec
Confidence            99999999888763

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=99.76  E-value=3.3e-15  Score=136.68  Aligned_cols=243  Identities=10%  Similarity=0.018  Sum_probs=176.2

Q ss_pred             EEEEecCCCEEEEEe----------cCceEEEEECCCCceeEEeecc------CccCeEEEEeCCCCcEEEEEec--CCc
Q psy17610         86 SLQYNPVNNKVFVGT----------VNCEIFLIDMNSGFTLTLVNTC------HTSAIYDLQFPVNFSSVFATCS--KND  147 (515)
Q Consensus        86 ~~~~s~~~~~l~~~~----------~d~~i~iw~~~~~~~~~~~~~~------h~~~v~~~~~~~~~~~l~~~~~--d~~  147 (515)
                      .++++|||++|+++.          .++.|.++|..+++....+..+      .......++|+|||++++++..  ++.
T Consensus       122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~  201 (426)
T 3c75_H          122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPA  201 (426)
T ss_dssp             EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCE
T ss_pred             ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCe
Confidence            799999999998876          3678999999997655554322      1123467899999999999874  578


Q ss_pred             EEEEeCCCCceeEEEEecCeEEEEEEEeeCC-CEEEEEeCCCeEEEEecCCCceEEEe---cCCCCCC-eEEEEEcCCCC
Q psy17610        148 IRIWSVRTLNELLRISVMNMICACIVFTYDG-KAILSGWNDGFIRCFTPQSGKLKFII---PNAHNRG-VTALAITQDGT  222 (515)
Q Consensus       148 i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~~~~~~~~~~~~~---~~~~~~~-v~~~~~~~~~~  222 (515)
                      |.+.|+.+++.+.++.....    ....|++ ..+++.+.||.+.+.+..+++.....   ......+ ...+.+.+++.
T Consensus       202 VsVID~~t~kvv~~I~v~g~----~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~  277 (426)
T 3c75_H          202 VGVVDLEGKTFDRMLDVPDC----YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSG  277 (426)
T ss_dssp             EEEEETTTTEEEEEEECCSE----EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTC
T ss_pred             EEEEECCCCeEEEEEEcCCc----eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCC
Confidence            99999999999888875432    2334443 55666777888888887666554321   0111111 12356788888


Q ss_pred             EEEEecCCCcEEEEEccCCceeeEEeecc----------ccCceEEEEEecCCCEEEEEeC----------CCcEEEEEc
Q psy17610        223 RLLSGGGEGQVRIWKLTRESQSLQCVLKE----------HTSSVSVIQIKSDSKEAMSAST----------DGTCVLWDL  282 (515)
Q Consensus       223 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~l~~~~~----------d~~i~iwd~  282 (515)
                      .++..+..+.+.+.|...........+.-          .......++++|++++++....          ++.|.+.|.
T Consensus       278 ~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~  357 (426)
T 3c75_H          278 RLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNA  357 (426)
T ss_dssp             EEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEET
T ss_pred             EEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEEC
Confidence            88777788999999985433222211110          1122234689999988777642          357999999


Q ss_pred             ccceEEEEEEcCccEEEEEEcCCCc-EEEEEE-CCCeEEEEeCCCCceEEEE
Q psy17610        283 IKSTRLIIMILPSMIMSAAYHPSEV-QLITCS-TNKMIDYWETCDGSIIRSL  332 (515)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~-~~~~i~~~d~~~~~~~~~~  332 (515)
                      .+.+.+..+........++++|+++ ++++.. .++.|.++|+.+++.+.++
T Consensus       358 ~T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI  409 (426)
T 3c75_H          358 ETGERINKIELGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV  409 (426)
T ss_dssp             TTCCEEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred             CCCeEEEEEECCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence            9999999998888899999999999 888888 5899999999999999987

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.76  E-value=3.6e-14  Score=126.68  Aligned_cols=275  Identities=11%  Similarity=0.015  Sum_probs=195.1

Q ss_pred             CccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEe--cCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCce
Q psy17610        123 HTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISV--MNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKL  200 (515)
Q Consensus       123 h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~  200 (515)
                      ....+.++++.++|...++...++.|.+||.. ++.. .+..  ....+..+++.++++..++...++.|..+|.. ++.
T Consensus        18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~   94 (300)
T 2qc5_A           18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIK-EFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF   94 (300)
T ss_dssp             TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred             CCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceE-EEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe
Confidence            45578899999999877766678999999987 5443 3332  23567899999999877776667899999988 655


Q ss_pred             EEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEE
Q psy17610        201 KFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLW  280 (515)
Q Consensus       201 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw  280 (515)
                      ...........+..+++.++++++++...++.|..++.. .... ...+......+..+++.++++..++...++.|..+
T Consensus        95 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~-~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~  172 (300)
T 2qc5_A           95 TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY-EYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRI  172 (300)
T ss_dssp             EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEE
T ss_pred             EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEE-EccCCCCCCCceeEEECCCCCEEEEecCCCeEEEE
Confidence            432222244678999999999988877777889999875 2222 22233345678899999999966666667889999


Q ss_pred             EcccceEEEEEEc---CccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcC
Q psy17610        281 DLIKSTRLIIMIL---PSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA  357 (515)
Q Consensus       281 d~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~  357 (515)
                      |. +++... +..   ...+..+++.+++...++....+.|..+|. +++............+.+++++++|++.++...
T Consensus       173 ~~-~g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~  249 (300)
T 2qc5_A          173 TN-TGKLEE-YPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWG  249 (300)
T ss_dssp             CT-TCCEEE-EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETT
T ss_pred             CC-CCcEEE-eeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccC
Confidence            98 554443 332   235889999999987777667788999998 555443322222366889999999997777767


Q ss_pred             CCeEEEEEccCCeee-eeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeC
Q psy17610        358 DQIVKMWMYREGVPC-FVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTF  408 (515)
Q Consensus       358 dg~i~i~d~~~~~~~-~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~  408 (515)
                      ++.|..|+. +++.. ..+......+.++++++++++.++.. . .|..++.
T Consensus       250 ~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p  298 (300)
T 2qc5_A          250 ANQIGRITN-DNTIQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLNL  298 (300)
T ss_dssp             TTEEEEECT-TSCEEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEEE
T ss_pred             CCeEEEECC-CCcEEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEEeCC
Confidence            789999998 44332 22333456689999999998666554 4 6666654

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=99.75  E-value=2.3e-15  Score=137.70  Aligned_cols=275  Identities=12%  Similarity=0.094  Sum_probs=195.2

Q ss_pred             cCCCEEEEEecC-----ceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEe----------cCCcEEEEeCCC
Q psy17610         91 PVNNKVFVGTVN-----CEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATC----------SKNDIRIWSVRT  155 (515)
Q Consensus        91 ~~~~~l~~~~~d-----~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~----------~d~~i~iw~~~~  155 (515)
                      |+++++++....     +.|.++|..+++.+..+..+ ..+  .++++||+++++++.          .++.|.++|..+
T Consensus        82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG-~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t  158 (426)
T 3c75_H           82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGG-FLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVT  158 (426)
T ss_dssp             CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEEC-SSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred             CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECC-CCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCC
Confidence            477777776552     69999999997666555443 344  899999999998887          367899999999


Q ss_pred             CceeEEEEec-------CeEEEEEEEeeCCCEEEEEeC--CCeEEEEecCCCceEEEecCCCCCCeEEEEEcCC-CCEEE
Q psy17610        156 LNELLRISVM-------NMICACIVFTYDGKAILSGWN--DGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQD-GTRLL  225 (515)
Q Consensus       156 ~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~  225 (515)
                      ++.+.++...       ......+.|+|||++++++..  ++.|.+.|+.+++.+..+..+..     ....|+ .+.++
T Consensus       159 ~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~-----~~~~p~g~~~~v  233 (426)
T 3c75_H          159 FLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC-----YHIFPASPTVFY  233 (426)
T ss_dssp             CCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE-----EEEEEEETTEEE
T ss_pred             CcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc-----eeeccCCCcEEE
Confidence            9998888643       122356899999999998874  57899999999999888754321     223332 24555


Q ss_pred             EecCCCcEEEEEccCCceeeE--EeeccccCce-EEEEEecCCCEEEEEeCCCcEEEEEcccceEEE--EEEc-------
Q psy17610        226 SGGGEGQVRIWKLTRESQSLQ--CVLKEHTSSV-SVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLI--IMIL-------  293 (515)
Q Consensus       226 ~~~~d~~i~iw~~~~~~~~~~--~~~~~~~~~v-~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~--~~~~-------  293 (515)
                      +.+.||.+.+.+....+....  ..+.....++ ..+.+.+++..++.....+.+.+.|........  .+..       
T Consensus       234 ~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~  313 (426)
T 3c75_H          234 MNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERA  313 (426)
T ss_dssp             EEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGG
T ss_pred             EEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccc
Confidence            566677777777632211110  0111111121 235678898888888888999999986544321  1111       


Q ss_pred             ----CccEEEEEEcCCCcEEEEEEC----------CCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCC-EEEEEc-C
Q psy17610        294 ----PSMIMSAAYHPSEVQLITCST----------NKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGK-YFLTGG-A  357 (515)
Q Consensus       294 ----~~~~~~~~~~~~~~~l~~~~~----------~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~-~  357 (515)
                          +.....++++|+++++++...          .+.|.++|+.+.+.+.++...  .....++|+|||+ ++++.. .
T Consensus       314 ~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg--~~P~gia~spDg~~~lyv~n~~  391 (426)
T 3c75_H          314 DDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG--HEIDSINVSQDAEPLLYALSAG  391 (426)
T ss_dssp             GTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE--EEECEEEECCSSSCEEEEEETT
T ss_pred             cccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECC--CCcCeEEEccCCCEEEEEEcCC
Confidence                111223689999988877643          357999999999999999865  4678999999999 888887 5


Q ss_pred             CCeEEEEEccCCeeeeec
Q psy17610        358 DQIVKMWMYREGVPCFVG  375 (515)
Q Consensus       358 dg~i~i~d~~~~~~~~~~  375 (515)
                      ++.|.++|..+++.+.++
T Consensus       392 s~~VsVID~~t~kvv~tI  409 (426)
T 3c75_H          392 TQTLHIYDAATGEELRSV  409 (426)
T ss_dssp             TTEEEEEETTTCCEEEEE
T ss_pred             CCeEEEEECCCCCEEEEe
Confidence            899999999999998876

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.74  E-value=3e-15  Score=150.73  Aligned_cols=277  Identities=9%  Similarity=-0.005  Sum_probs=181.6

Q ss_pred             ecCCCEEEEEecCc-----eEEEEECC---CCceeEEe------eccCccCeEEEEeCCCCcEEEEEecC-----CcEEE
Q psy17610         90 NPVNNKVFVGTVNC-----EIFLIDMN---SGFTLTLV------NTCHTSAIYDLQFPVNFSSVFATCSK-----NDIRI  150 (515)
Q Consensus        90 s~~~~~l~~~~~d~-----~i~iw~~~---~~~~~~~~------~~~h~~~v~~~~~~~~~~~l~~~~~d-----~~i~i  150 (515)
                      +|+|++++....++     .|++.+..   .+. ...+      ..+|...+..++|||||++|+.+..+     ..|++
T Consensus       115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v  193 (741)
T 1yr2_A          115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTK-GRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKF  193 (741)
T ss_dssp             EEETTEEEEEEECSSCSSCEEEEEETTSCTTCC-CEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEE
T ss_pred             EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCC-CEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEE
Confidence            38999988776543     34455544   332 2322      22344468899999999999888763     35999


Q ss_pred             EeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCe--------------EEEEecCCCce--EEEec-CCCCCCeE
Q psy17610        151 WSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGF--------------IRCFTPQSGKL--KFIIP-NAHNRGVT  213 (515)
Q Consensus       151 w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~--------------i~~~~~~~~~~--~~~~~-~~~~~~v~  213 (515)
                      ||+.+++.+.. ..+...+..++|+|| +.|+.++.++.              |++|++.++..  ...+. ..+...+.
T Consensus       194 ~dl~tg~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~  271 (741)
T 1yr2_A          194 VGVADGKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGH  271 (741)
T ss_dssp             EETTTCCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEE
T ss_pred             EECCCCCCCCc-cCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEE
Confidence            99999887543 222222357899999 99998876553              88999987752  22221 22334588


Q ss_pred             EEEEcCCCCEEEEecCCC-----cEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCC----CcEEEEEccc
Q psy17610        214 ALAITQDGTRLLSGGGEG-----QVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTD----GTCVLWDLIK  284 (515)
Q Consensus       214 ~~~~~~~~~~l~~~~~d~-----~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~iwd~~~  284 (515)
                      .+.|+|||++|+..+.++     .|.+||+..........+..+...+... ++|+++.|+..+.+    +.|.+||+.+
T Consensus       272 ~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~  350 (741)
T 1yr2_A          272 GASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSG  350 (741)
T ss_dssp             EEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSS
T ss_pred             EEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCC
Confidence            999999999988776543     8999998654222022333444444444 35889988887764    4599999987


Q ss_pred             c--eEEEEEEcCc-cEEEEEEcCCCcEEEEEECCCeEEEEeCC-CCceEEEEecCCCccEEEEEEcCCCCEEEEE----c
Q psy17610        285 S--TRLIIMILPS-MIMSAAYHPSEVQLITCSTNKMIDYWETC-DGSIIRSLEGSDVAAVNCVDFVDDGKYFLTG----G  356 (515)
Q Consensus       285 ~--~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~i~~~d~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~----~  356 (515)
                      +  .....+.... .+..+.+. ++..+++...++..++|... +++....+..+....+..+.++|+++.++..    .
T Consensus       351 ~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~  429 (741)
T 1yr2_A          351 STPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFT  429 (741)
T ss_dssp             SSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETT
T ss_pred             CccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCC
Confidence            4  3333333332 45566776 55667777788876666443 4566666665444778899999998866633    2


Q ss_pred             CCCeEEEEEccCCee
Q psy17610        357 ADQIVKMWMYREGVP  371 (515)
Q Consensus       357 ~dg~i~i~d~~~~~~  371 (515)
                      ..+.+++||+.+++.
T Consensus       430 ~P~~i~~~d~~tg~~  444 (741)
T 1yr2_A          430 QPATVLALDPATAKT  444 (741)
T ss_dssp             EEEEEEEEETTTTEE
T ss_pred             CCCEEEEEECCCCcE
Confidence            347899999988763

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.73  E-value=7.7e-16  Score=135.29  Aligned_cols=240  Identities=7%  Similarity=-0.017  Sum_probs=169.7

Q ss_pred             cEEEEEEecCCCEEE-EEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEE
Q psy17610         83 GISSLQYNPVNNKVF-VGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLR  161 (515)
Q Consensus        83 ~v~~~~~s~~~~~l~-~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~  161 (515)
                      ...+++++|+|++++ +...++.|.+|+..++. .......+...+.++++++++..+++.. ++.|.+||...... ..
T Consensus        25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~-~~  101 (270)
T 1rwi_B           25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTG-TTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ-TV  101 (270)
T ss_dssp             CEEEEEECTTCCEEEEECSSSCEEEEECC------EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC-EE
T ss_pred             CccceEECCCCCEEEEccCCCCcEEEecCCCcc-cceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE-ee
Confidence            788999999999666 44677899999987643 2222233445688999999987555444 88999999876543 33


Q ss_pred             EE-ecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccC
Q psy17610        162 IS-VMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTR  240 (515)
Q Consensus       162 ~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~  240 (515)
                      +. .....+..++++++|+.+++...++.|.+|+..+....... ......+..++++++|+.+++...++.|.+|+...
T Consensus       102 ~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~-~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~  180 (270)
T 1rwi_B          102 LPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLP-FTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAES  180 (270)
T ss_dssp             CCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECC-CCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTT
T ss_pred             eecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeec-cccCCCceeEEEeCCCCEEEEECCCCEEEEEecCC
Confidence            32 22245789999999997777777889999987665544322 23334678899999999777777788999999854


Q ss_pred             CceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEc-CccEEEEEEcCCCcEEEEEECCCeEE
Q psy17610        241 ESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMIL-PSMIMSAAYHPSEVQLITCSTNKMID  319 (515)
Q Consensus       241 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~i~  319 (515)
                      ..  .......+...+..++++++|..+++...++.|.+|+............ ...+.+++++++++.+++...++.|+
T Consensus       181 ~~--~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~  258 (270)
T 1rwi_B          181 NN--QVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVV  258 (270)
T ss_dssp             CC--EEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEE
T ss_pred             Cc--eEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEE
Confidence            32  2222223336678999999997777777788999999876543332212 24688999999999888888899999


Q ss_pred             EEeCCCCce
Q psy17610        320 YWETCDGSI  328 (515)
Q Consensus       320 ~~d~~~~~~  328 (515)
                      ++++...+.
T Consensus       259 ~~~~~~~~~  267 (270)
T 1rwi_B          259 KLTSLEHHH  267 (270)
T ss_dssp             EECCCGGGS
T ss_pred             EEcCCCccc
Confidence            999876543

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.73  E-value=1.6e-15  Score=133.25  Aligned_cols=240  Identities=11%  Similarity=0.024  Sum_probs=170.3

Q ss_pred             EEEEEEEeeCCCEEE-EEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeE
Q psy17610        168 ICACIVFTYDGKAIL-SGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQ  246 (515)
Q Consensus       168 ~v~~~~~~~~~~~l~-~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~  246 (515)
                      ...+++++++++.++ +...++.|.+|+..++.... +...+...+.+++++++|+.+++.. ++.|.+||......  .
T Consensus        25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~--~  100 (270)
T 1rwi_B           25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTV-LPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ--T  100 (270)
T ss_dssp             CEEEEEECTTCCEEEEECSSSCEEEEECC-----EE-CCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC--E
T ss_pred             CccceEECCCCCEEEEccCCCCcEEEecCCCcccce-EeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE--e
Confidence            457889999998666 44678899999976655432 2233445678999999998666655 88999999753322  1


Q ss_pred             EeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEE-cCccEEEEEEcCCCcEEEEEECCCeEEEEeCCC
Q psy17610        247 CVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMI-LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCD  325 (515)
Q Consensus       247 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~  325 (515)
                      .........+..++++++++.+++...++.|.+|+..+........ ....+..++++++++.+++...++.|.+||...
T Consensus       101 ~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~  180 (270)
T 1rwi_B          101 VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAES  180 (270)
T ss_dssp             ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTT
T ss_pred             eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCC
Confidence            1111233568899999999877777778899999866544332211 123577899999998777766788999999877


Q ss_pred             CceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEE
Q psy17610        326 GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFL  405 (515)
Q Consensus       326 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i  405 (515)
                      ........... ..+..++++++|.++++...++.|.+|+............+...+.+++++++++++++...++.|++
T Consensus       181 ~~~~~~~~~~~-~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~  259 (270)
T 1rwi_B          181 NNQVVLPFTDI-TAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVK  259 (270)
T ss_dssp             CCEEECCCSSC-CSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEE
T ss_pred             CceEeecccCC-CCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEE
Confidence            66543322222 56789999999988888777889999998765443333334467899999999998888888999999


Q ss_pred             EeCCCCc
Q psy17610        406 WTFPELE  412 (515)
Q Consensus       406 w~~~~~~  412 (515)
                      +++...+
T Consensus       260 ~~~~~~~  266 (270)
T 1rwi_B          260 LTSLEHH  266 (270)
T ss_dssp             ECCCGGG
T ss_pred             EcCCCcc
Confidence            9987543

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.73  E-value=1.5e-15  Score=152.97  Aligned_cols=275  Identities=12%  Similarity=0.010  Sum_probs=182.5

Q ss_pred             CCCCcEEEEEecCCc---EEEEeCCC----CceeEEE-------EecCeEEEEEEEeeCCCEEEEEeCC-----CeEEEE
Q psy17610        133 PVNFSSVFATCSKND---IRIWSVRT----LNELLRI-------SVMNMICACIVFTYDGKAILSGWND-----GFIRCF  193 (515)
Q Consensus       133 ~~~~~~l~~~~~d~~---i~iw~~~~----~~~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~~~  193 (515)
                      +|+|++++....++.   -.+|....    +.....+       .++...+..++|||||++|+.+..+     ..|++|
T Consensus       115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~  194 (741)
T 1yr2_A          115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFV  194 (741)
T ss_dssp             EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred             EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence            489998888776432   55565432    2223332       1223468899999999999877654     369999


Q ss_pred             ecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCc--------------EEEEEccCCcee--eEEeeccccCceE
Q psy17610        194 TPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQ--------------VRIWKLTRESQS--LQCVLKEHTSSVS  257 (515)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~--------------i~iw~~~~~~~~--~~~~~~~~~~~v~  257 (515)
                      |+.+++.....  .+...+..++|+|| +.|+.++.++.              |++|++.+....  .+.....+...+.
T Consensus       195 dl~tg~~~~~~--~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~  271 (741)
T 1yr2_A          195 GVADGKPLADE--LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGH  271 (741)
T ss_dssp             ETTTCCEEEEE--EEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEE
T ss_pred             ECCCCCCCCcc--CCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEE
Confidence            99999876542  12222357899999 98888876554              888998544322  2322333444588


Q ss_pred             EEEEecCCCEEEEEeCCC-----cEEEEEcccc--e-EEEEEEcCccEEEEEEcCCCcEEEEEEC----CCeEEEEeCCC
Q psy17610        258 VIQIKSDSKEAMSASTDG-----TCVLWDLIKS--T-RLIIMILPSMIMSAAYHPSEVQLITCST----NKMIDYWETCD  325 (515)
Q Consensus       258 ~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~--~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~i~~~d~~~  325 (515)
                      .+.|+|||++++..+.++     .|.+||+.++  + .............. +.|+++.|+..+.    ++.|.+||+.+
T Consensus       272 ~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~  350 (741)
T 1yr2_A          272 GASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSG  350 (741)
T ss_dssp             EEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSS
T ss_pred             EEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCC
Confidence            999999999988877544     8999999876  3 23333333333333 3488988888776    45699999987


Q ss_pred             C-ceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEcc-CCeeeeeccC-CCCCeeEEEECCCCcEEEEE-e---
Q psy17610        326 G-SIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYR-EGVPCFVGIG-HAASITKIKISPDKKVIVSV-S---  398 (515)
Q Consensus       326 ~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~-~---  398 (515)
                      + .....+..+....+..++++ ++.++++...|+..+||.+. ++.....+.. +...+..++++|+++.|+.. +   
T Consensus       351 ~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~  429 (741)
T 1yr2_A          351 STPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFT  429 (741)
T ss_dssp             SSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETT
T ss_pred             CccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCC
Confidence            5 24444444443567777887 56778888889887777654 4555555543 46778899999998766533 2   


Q ss_pred             CCCcEEEEeCCCCc
Q psy17610        399 ADGGIFLWTFPELE  412 (515)
Q Consensus       399 ~dg~i~iw~~~~~~  412 (515)
                      ..+++.+||+.+.+
T Consensus       430 ~P~~i~~~d~~tg~  443 (741)
T 1yr2_A          430 QPATVLALDPATAK  443 (741)
T ss_dssp             EEEEEEEEETTTTE
T ss_pred             CCCEEEEEECCCCc
Confidence            34789999987654

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=99.72  E-value=7.8e-12  Score=127.10  Aligned_cols=398  Identities=10%  Similarity=0.070  Sum_probs=250.6

Q ss_pred             EEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEE
Q psy17610         84 ISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRIS  163 (515)
Q Consensus        84 v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~  163 (515)
                      |.++...++++ |.+++.++-|..|+.+++.........+...|.++...+++. +.+++.++.+..||..+++.. .+.
T Consensus       175 i~~i~~d~~g~-lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~-lwigt~~~Gl~~~~~~~~~~~-~~~  251 (795)
T 4a2l_A          175 IASTLYRQGDQ-IYIGTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTR-IWVATEGAGLFLINPKTKEIK-NYL  251 (795)
T ss_dssp             CEEEEEEETTE-EEEEESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTE-EEEEEBSSCEEEEETTTTEEE-EEC
T ss_pred             eEEEEECCCCC-EEEEECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCC-EEEEECCCCeEEEeCCCCeEE-Eee
Confidence            88998888876 445666556999998774322211122356788898888874 555555555889998765433 232


Q ss_pred             e--------cCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecC------CCCCCeEEEEEcCCCCEEEEecC
Q psy17610        164 V--------MNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPN------AHNRGVTALAITQDGTRLLSGGG  229 (515)
Q Consensus       164 ~--------~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~  229 (515)
                      .        ....|.++...++|. |..|+.+| |.+|+..+++.......      -....|.++...++|. |..|+.
T Consensus       252 ~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~G-l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~  328 (795)
T 4a2l_A          252 HSPSNPKSISSNYIRSLAMDSQNR-LWIGTFND-LNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTY  328 (795)
T ss_dssp             CCTTCTTSCSCSBEEEEEECTTSC-EEEEESSC-EEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEES
T ss_pred             cCCCCccccCCCeEEEEEEcCCCC-EEEEeCCh-hheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEEC
Confidence            1        135689998888887 44555554 88999887765443211      1235699999999887 555777


Q ss_pred             CCcEEEEEccCCceeeEEeec----cccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEE---------cCcc
Q psy17610        230 EGQVRIWKLTRESQSLQCVLK----EHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMI---------LPSM  296 (515)
Q Consensus       230 d~~i~iw~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~---------~~~~  296 (515)
                      ++-|..|+.............    -....|.++...+++. +..|+.++-|..|+..+++......         ....
T Consensus       329 ~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~  407 (795)
T 4a2l_A          329 FGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNN  407 (795)
T ss_dssp             SSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSC
T ss_pred             CCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCcc
Confidence            777999987433222111111    1234688888887766 5667777779999987665433221         1246


Q ss_pred             EEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEec----CCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeee
Q psy17610        297 IMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEG----SDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPC  372 (515)
Q Consensus       297 ~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~  372 (515)
                      +.++...++++.+.+|+.++-+..+|..+++... +..    .....|.++...++|++.+.. .+ -+.+||..+++..
T Consensus       408 v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~-~~~~~~~l~~~~v~~i~~d~~g~lwigt-~~-Gl~~~~~~~~~~~  484 (795)
T 4a2l_A          408 IKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVEN-FNQRNSQLVNENVYAILPDGEGNLWLGT-LS-ALVRFNPEQRSFT  484 (795)
T ss_dssp             EEEEEEETTTTEEEEEETTTEEEEEETTTCCEEE-ECTTTSCCSCSCEEEEEECSSSCEEEEE-SS-CEEEEETTTTEEE
T ss_pred             EEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEE-eecCCCCcCCCeeEEEEECCCCCEEEEe-cC-ceeEEeCCCCeEE
Confidence            8889888888856677777789999988776433 321    122578899998888855544 44 4888998776543


Q ss_pred             eecc------CCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEE
Q psy17610        373 FVGI------GHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMS  446 (515)
Q Consensus       373 ~~~~------~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  446 (515)
                      ....      .....|.++...+++++.+.. . +.+..|+...... .     ..    ...     .........|.+
T Consensus       485 ~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt-~-~Gl~~~~~~~~~~-~-----~~----~~~-----~~~~l~~~~i~~  547 (795)
T 4a2l_A          485 TIEKEKDGTPVVSKQITTLFRDSHKRLWIGG-E-EGLSVFKQEGLDI-Q-----KA----SIL-----PVSNVTKLFTNC  547 (795)
T ss_dssp             ECCBCTTCCBCCCCCEEEEEECTTCCEEEEE-S-SCEEEEEEETTEE-E-----EC----CCS-----CSCGGGGSCEEE
T ss_pred             EccccccccccCCceEEEEEECCCCCEEEEe-C-CceEEEeCCCCeE-E-----Ee----cCC-----CCCCCCCCeeEE
Confidence            3221      123678999999999866654 4 4588888654321 0     00    000     000012345888


Q ss_pred             eeeccCCcEEEEeecCCeEEEEecCCCeeeeee--cccccceEEEEEEcCCCcEEEEeecCCeEEEEE
Q psy17610        447 AAYHPSEVQLITCSTNKMIDYWETCDGSIIRSL--EGSDVAAVNCVDFVDDGKYFLTGGADQIVKICL  512 (515)
Q Consensus       447 ~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~  512 (515)
                      +...++|.+.+... . -+..||..+++...--  .+.....|.++...++|++.+++ .+| |..|+
T Consensus       548 i~~d~~g~lWigT~-~-Gl~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t-~~G-l~~~~  611 (795)
T 4a2l_A          548 IYEASNGIIWVGTR-E-GFYCFNEKDKQIKRYNTTNGLPNNVVYGILEDSFGRLWLST-NRG-ISCFN  611 (795)
T ss_dssp             EEECTTSCEEEEES-S-CEEEEETTTTEEEEECGGGTCSCSCEEEEEECTTSCEEEEE-TTE-EEEEE
T ss_pred             EEECCCCCEEEEeC-C-CceeECCCCCcEEEeCCCCCCchhheEEEEECCCCCEEEEc-CCc-eEEEc
Confidence            99999998665443 3 4888998776543321  22223568999999999876654 455 44443

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=99.71  E-value=4.7e-12  Score=128.72  Aligned_cols=398  Identities=8%  Similarity=0.023  Sum_probs=248.1

Q ss_pred             EEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccC-ccC-eEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEE
Q psy17610         84 ISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCH-TSA-IYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLR  161 (515)
Q Consensus        84 v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h-~~~-v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~  161 (515)
                      |.++...++|++.+ ++. +.|..||.+++ .......++ ... |.++...+++ .+.+++.++.+..|+..+++....
T Consensus       133 i~~i~~d~~g~lwi-~t~-~gl~~~~~~~~-~~~~~~~~~~~~~~i~~i~~d~~g-~lwigt~~~Gl~~~~~~~~~~~~~  208 (795)
T 4a2l_A          133 VNGIEEISPEQLLI-STP-EGLIMFDIKES-KFIDDSFSTAMHKTIASTLYRQGD-QIYIGTSTDGLYTYSITQKTFEKV  208 (795)
T ss_dssp             CCEEEEEETTEEEE-EET-TEEEEEETTTT-EEECSSSCHHHHTCCEEEEEEETT-EEEEEESSSCEEEEETTTCCEEEC
T ss_pred             EEEEEECCCCCEEE-EEC-CceEEEECCCC-EEEeccCCCCCCcceEEEEECCCC-CEEEEECCCCEEEEeCCCCeEEEe
Confidence            88999888887554 455 45899998774 332222111 123 8888888887 455566655688999877654322


Q ss_pred             E-EecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecC------CCCCCeEEEEEcCCCCEEEEecCCCcEE
Q psy17610        162 I-SVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPN------AHNRGVTALAITQDGTRLLSGGGEGQVR  234 (515)
Q Consensus       162 ~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~d~~i~  234 (515)
                      . ......|.++...+++. |..++.++-+..||..+++.......      .....|.++...++|.+.+ |+.+ -|.
T Consensus       209 ~~~~~~~~i~~i~~d~~g~-lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~  285 (795)
T 4a2l_A          209 IPILGTKQIQAILQQSPTR-IWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWI-GTFN-DLN  285 (795)
T ss_dssp             C----CCCEEEEEEEETTE-EEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEE-EESS-CEE
T ss_pred             cCCCCCCeeEEEEEcCCCC-EEEEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEE-EeCC-hhh
Confidence            1 12345688888888776 44555444488999887765443211      1235699999998887554 5555 588


Q ss_pred             EEEccCCceeeEEee-----ccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEE-------cCccEEEEEE
Q psy17610        235 IWKLTRESQSLQCVL-----KEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMI-------LPSMIMSAAY  302 (515)
Q Consensus       235 iw~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-------~~~~~~~~~~  302 (515)
                      +|+............     .-....|.++...++|. +..|+.++-|..++..+........       ....|.++..
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~  364 (795)
T 4a2l_A          286 IYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVE  364 (795)
T ss_dssp             EEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEE
T ss_pred             eEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEE
Confidence            898753322211110     01235689998888876 5667777779999876654322211       1235888988


Q ss_pred             cCCCcEEEEEECCCeEEEEeCCCCceEEEEec-------CCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeec
Q psy17610        303 HPSEVQLITCSTNKMIDYWETCDGSIIRSLEG-------SDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVG  375 (515)
Q Consensus       303 ~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~-------~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~  375 (515)
                      .+++... +|+.++-+..|+..+++...-...       -....|.++...++|+.|.+|+.++-+..+|..+++.....
T Consensus       365 d~~g~lW-iGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~  443 (795)
T 4a2l_A          365 DKDKNLW-IGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFN  443 (795)
T ss_dssp             CTTSCEE-EEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEEC
T ss_pred             CCCCCEE-EEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEee
Confidence            8887755 467777799999877654332211       11257889999888885677777777999998876543322


Q ss_pred             c----CCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeecc
Q psy17610        376 I----GHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHP  451 (515)
Q Consensus       376 ~----~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~  451 (515)
                      .    .....|.++...+++++.+.. . +.+.+|+..+.........            .  .........|.++...+
T Consensus       444 ~~~~~l~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~~~~~~~~------------~--~~~~~~~~~i~~i~~d~  507 (795)
T 4a2l_A          444 QRNSQLVNENVYAILPDGEGNLWLGT-L-SALVRFNPEQRSFTTIEKE------------K--DGTPVVSKQITTLFRDS  507 (795)
T ss_dssp             TTTSCCSCSCEEEEEECSSSCEEEEE-S-SCEEEEETTTTEEEECCBC------------T--TCCBCCCCCEEEEEECT
T ss_pred             cCCCCcCCCeeEEEEECCCCCEEEEe-c-CceeEEeCCCCeEEEcccc------------c--cccccCCceEEEEEECC
Confidence            1    234679999999888866544 4 4588888755321100000            0  00001124588898998


Q ss_pred             CCcEEEEeecCCeEEEEecCCCeeeeeec------ccccceEEEEEEcCCCcEEEEeecCCeEEEEE
Q psy17610        452 SEVQLITCSTNKMIDYWETCDGSIIRSLE------GSDVAAVNCVDFVDDGKYFLTGGADQIVKICL  512 (515)
Q Consensus       452 ~~~~l~~~~~dg~v~iwd~~~~~~~~~~~------~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~  512 (515)
                      +|++.+...  +-+..||..+++.  .+.      +.....|.++...++|++.++.. .| +..||
T Consensus       508 ~g~lWigt~--~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~G-l~~~d  568 (795)
T 4a2l_A          508 HKRLWIGGE--EGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-EG-FYCFN  568 (795)
T ss_dssp             TCCEEEEES--SCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-SC-EEEEE
T ss_pred             CCCEEEEeC--CceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-CC-ceeEC
Confidence            888666544  4588999877765  222      11225799999999998665443 45 55554

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.67  E-value=1.2e-13  Score=124.19  Aligned_cols=240  Identities=12%  Similarity=0.109  Sum_probs=166.6

Q ss_pred             EEEEEEEeeCCCEEEE-------EeCCCeEEEEecCCCceEEEec---CCCCCCeEEEEEcCC-CCEEEEecCCCcEEEE
Q psy17610        168 ICACIVFTYDGKAILS-------GWNDGFIRCFTPQSGKLKFIIP---NAHNRGVTALAITQD-GTRLLSGGGEGQVRIW  236 (515)
Q Consensus       168 ~v~~~~~~~~~~~l~~-------~~~dg~i~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iw  236 (515)
                      ...+++|++++..+++       ...++.|..||..+++......   .++...+..++++++ ++++++.. .+.|.+|
T Consensus        19 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~~~l~~~   97 (314)
T 1pjx_A           19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-RLGLLVV   97 (314)
T ss_dssp             TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-TTEEEEE
T ss_pred             CccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-CCCEEEE
Confidence            3467899999987777       5678899999988887654321   124567899999999 76555444 4478899


Q ss_pred             EccCCceeeE-Eee-c-cccCceEEEEEecCCCEEEEEeCC---------------CcEEEEEcccceEEEEEEcCccEE
Q psy17610        237 KLTRESQSLQ-CVL-K-EHTSSVSVIQIKSDSKEAMSASTD---------------GTCVLWDLIKSTRLIIMILPSMIM  298 (515)
Q Consensus       237 ~~~~~~~~~~-~~~-~-~~~~~v~~~~~~~~~~~l~~~~~d---------------~~i~iwd~~~~~~~~~~~~~~~~~  298 (515)
                      |.. ...... ... . .....+..++++++++.+++...+               +.|..++.. ++............
T Consensus        98 d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~  175 (314)
T 1pjx_A           98 QTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFPN  175 (314)
T ss_dssp             ETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSEE
T ss_pred             eCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCCcc
Confidence            985 332211 111 1 112457899999999887776654               567777765 54444333334567


Q ss_pred             EEEEc----CCCcEEEEE-ECCCeEEEEeCC-CCce-----EEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEcc
Q psy17610        299 SAAYH----PSEVQLITC-STNKMIDYWETC-DGSI-----IRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYR  367 (515)
Q Consensus       299 ~~~~~----~~~~~l~~~-~~~~~i~~~d~~-~~~~-----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~  367 (515)
                      .++++    |+++.++++ ..++.|.+||.. +++.     ...+..+....+..++++++|+++++...++.|.+||.+
T Consensus       176 ~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~  255 (314)
T 1pjx_A          176 GIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPD  255 (314)
T ss_dssp             EEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTT
T ss_pred             eEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCC
Confidence            88999    999776655 457899999976 4432     111221110457789999999988887778899999998


Q ss_pred             CCeeeeeccCCCCCeeEEEECCCCcEEE-EEeCCCcEEEEeCCC
Q psy17610        368 EGVPCFVGIGHAASITKIKISPDKKVIV-SVSADGGIFLWTFPE  410 (515)
Q Consensus       368 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~dg~i~iw~~~~  410 (515)
                      +++.+..+..+...+.+++|+|+++.|+ +...++.|..|++..
T Consensus       256 ~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~  299 (314)
T 1pjx_A          256 GGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR  299 (314)
T ss_dssp             CBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred             CCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence            7776666666667899999999999555 445568899998764

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.66  E-value=1.7e-13  Score=123.25  Aligned_cols=242  Identities=12%  Similarity=0.111  Sum_probs=168.4

Q ss_pred             cCCCcEEEEEEecCCCEEEE-------EecCceEEEEECCCCceeEEee---ccCccCeEEEEeCCC-CcEEEEEecCCc
Q psy17610         79 KDDSGISSLQYNPVNNKVFV-------GTVNCEIFLIDMNSGFTLTLVN---TCHTSAIYDLQFPVN-FSSVFATCSKND  147 (515)
Q Consensus        79 ~~~~~v~~~~~s~~~~~l~~-------~~~d~~i~iw~~~~~~~~~~~~---~~h~~~v~~~~~~~~-~~~l~~~~~d~~  147 (515)
                      ..-....+++|+++++++++       +..++.|.+||..+++......   .++...+.+++++++ + .+++++..+.
T Consensus        15 ~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g-~l~v~~~~~~   93 (314)
T 1pjx_A           15 EDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDAN-QLFVADMRLG   93 (314)
T ss_dssp             CCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSS-EEEEEETTTE
T ss_pred             ccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCC-cEEEEECCCC
Confidence            34456789999999987777       5778899999988764432222   125567899999999 6 4555555557


Q ss_pred             EEEEeCCCCceeEE-EEe----cCeEEEEEEEeeCCCEEEEEeCC---------------CeEEEEecCCCceEEEecCC
Q psy17610        148 IRIWSVRTLNELLR-ISV----MNMICACIVFTYDGKAILSGWND---------------GFIRCFTPQSGKLKFIIPNA  207 (515)
Q Consensus       148 i~iw~~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~l~~~~~d---------------g~i~~~~~~~~~~~~~~~~~  207 (515)
                      |.+||.+ ++.... ...    ....+..++++++|+.+++...+               +.|..++.. ++.....  .
T Consensus        94 l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~--~  169 (314)
T 1pjx_A           94 LLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD--T  169 (314)
T ss_dssp             EEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE--E
T ss_pred             EEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec--c
Confidence            9999988 654322 111    12347889999999877776554               568888876 5544332  2


Q ss_pred             CCCCeEEEEEc----CCCCEEEEe-cCCCcEEEEEccC-Ccee---eEEeecccc-CceEEEEEecCCCEEEEEeCCCcE
Q psy17610        208 HNRGVTALAIT----QDGTRLLSG-GGEGQVRIWKLTR-ESQS---LQCVLKEHT-SSVSVIQIKSDSKEAMSASTDGTC  277 (515)
Q Consensus       208 ~~~~v~~~~~~----~~~~~l~~~-~~d~~i~iw~~~~-~~~~---~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i  277 (515)
                      +......++++    |+++.++.+ ..++.|.+|+... ....   ....+..+. ..+..++++++|+.+++...++.|
T Consensus       170 ~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i  249 (314)
T 1pjx_A          170 AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHI  249 (314)
T ss_dssp             EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEE
T ss_pred             CCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEE
Confidence            33456889999    998765544 5678999999752 2111   222233333 567889999999888887788899


Q ss_pred             EEEEcccceEEEEEEcC-ccEEEEEEcCCCcEEEEEE-CCCeEEEEeCCC
Q psy17610        278 VLWDLIKSTRLIIMILP-SMIMSAAYHPSEVQLITCS-TNKMIDYWETCD  325 (515)
Q Consensus       278 ~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~-~~~~i~~~d~~~  325 (515)
                      .+||..+++....+..+ ..+.+++++|+++.|++++ .++.|..|++..
T Consensus       250 ~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~  299 (314)
T 1pjx_A          250 EVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR  299 (314)
T ss_dssp             EEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred             EEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence            99999866665555555 5789999999999665554 567898888764

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=99.64  E-value=5.5e-13  Score=123.08  Aligned_cols=302  Identities=11%  Similarity=0.081  Sum_probs=197.3

Q ss_pred             CCCEEEEEecCceEEEEECCCCceeEEeeccC--------ccCeEE-EEeCCCCcEEEEEecCCcEEEEeCCCCceeEEE
Q psy17610         92 VNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCH--------TSAIYD-LQFPVNFSSVFATCSKNDIRIWSVRTLNELLRI  162 (515)
Q Consensus        92 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h--------~~~v~~-~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~  162 (515)
                      .+..+++++.++.|..+|.++|+.+-......        ...+.+ +..  ++..+++++.++.|..+|.++|+.+.+.
T Consensus        52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~~g~l~a~d~~tG~~~W~~  129 (376)
T 3q7m_A           52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV--SGGHVYIGSEKAQVYALNTSDGTVAWQT  129 (376)
T ss_dssp             ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred             ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceE--eCCEEEEEcCCCEEEEEECCCCCEEEEE
Confidence            46778888889999999999987664433211        122322 222  3458888888999999999999998877


Q ss_pred             EecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCC----eEEEEEcCCCCEEEEecCCCcEEEEEc
Q psy17610        163 SVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRG----VTALAITQDGTRLLSGGGEGQVRIWKL  238 (515)
Q Consensus       163 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~----v~~~~~~~~~~~l~~~~~d~~i~iw~~  238 (515)
                      ............  .+..+++++.++.+..+|.++|+.+..........    .......  +..++.+..++.+..+|.
T Consensus       130 ~~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~  205 (376)
T 3q7m_A          130 KVAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLM  205 (376)
T ss_dssp             ECSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEET
T ss_pred             eCCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEEC
Confidence            654332222222  24578888899999999999999887763221100    0111222  456788888999999998


Q ss_pred             cCCceeeEEeeccccCc--------eEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEE
Q psy17610        239 TRESQSLQCVLKEHTSS--------VSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLI  310 (515)
Q Consensus       239 ~~~~~~~~~~~~~~~~~--------v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  310 (515)
                      .+.+.............        +..... ..+..++.++.++.+..+|..+++.+....... ...+..  ++..++
T Consensus       206 ~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~-~~~~~~--~~~~l~  281 (376)
T 3q7m_A          206 EQGQMIWQQRISQATGSTEIDRLSDVDTTPV-VVNGVVFALAYNGNLTALDLRSGQIMWKRELGS-VNDFIV--DGNRIY  281 (376)
T ss_dssp             TTCCEEEEEECCC-----------CCCCCCE-EETTEEEEECTTSCEEEEETTTCCEEEEECCCC-EEEEEE--ETTEEE
T ss_pred             CCCcEEEEEecccCCCCcccccccccCCCcE-EECCEEEEEecCcEEEEEECCCCcEEeeccCCC-CCCceE--ECCEEE
Confidence            65443333222211000        100001 124677888889999999999998887665443 233333  467788


Q ss_pred             EEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeE-EEECC
Q psy17610        311 TCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITK-IKISP  389 (515)
Q Consensus       311 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~-~~~~~  389 (515)
                      +++.++.+..+|..+++.+................  .+..|++++.+|.+..+|..+++.+.........+.. ...  
T Consensus       282 ~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~--  357 (376)
T 3q7m_A          282 LVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVA--  357 (376)
T ss_dssp             EEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEE--
T ss_pred             EEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcceeCCEE--
Confidence            88899999999999999887776322122222223  2467888899999999999999888776543333322 222  


Q ss_pred             CCcEEEEEeCCCcEEEEe
Q psy17610        390 DKKVIVSVSADGGIFLWT  407 (515)
Q Consensus       390 ~~~~l~~~~~dg~i~iw~  407 (515)
                      .+..|+.++.+|.+..|+
T Consensus       358 ~~~~l~v~~~~G~l~~~~  375 (376)
T 3q7m_A          358 ADGKLLIQAKDGTVYSIT  375 (376)
T ss_dssp             ETTEEEEEBTTSCEEEEE
T ss_pred             ECCEEEEEeCCCEEEEEe
Confidence            245678888999999886

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.64  E-value=1.4e-12  Score=115.83  Aligned_cols=235  Identities=9%  Similarity=0.010  Sum_probs=157.3

Q ss_pred             ccCceEEEEEecCCCE-EEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEE
Q psy17610        252 HTSSVSVIQIKSDSKE-AMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIR  330 (515)
Q Consensus       252 ~~~~v~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~  330 (515)
                      ...-.....|++++.. +++...++.|..||..+++. ..+..+..+.+++++++++++++ . ++.|.+||..+++...
T Consensus        11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~   87 (297)
T 3g4e_A           11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVTMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVV   87 (297)
T ss_dssp             CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEE
T ss_pred             CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEeCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEE
Confidence            3445567889996554 55555678999999987765 45566778999999999995554 3 5689999998876543


Q ss_pred             EEecC---CCccEEEEEEcCCCCEEEEEcC---------CCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEE-
Q psy17610        331 SLEGS---DVAAVNCVDFVDDGKYFLTGGA---------DQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSV-  397 (515)
Q Consensus       331 ~~~~~---~~~~i~~~~~~~~~~~l~~~~~---------dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-  397 (515)
                      .....   ....++.++++|+|+++++...         ...-.+|.+........+..+....+.++|+|+++.|+.+ 
T Consensus        88 ~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~  167 (297)
T 3g4e_A           88 LATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYID  167 (297)
T ss_dssp             EEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEE
T ss_pred             EEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEec
Confidence            33321   2246889999999997765422         1223455443322222233344556889999999877554 


Q ss_pred             eCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeee
Q psy17610        398 SADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIR  477 (515)
Q Consensus       398 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~  477 (515)
                      +.++.|.+|++.......      ...       ............+..++++++|++.++....+.|..||..+++.+.
T Consensus       168 ~~~~~i~~~~~d~~~G~~------~~~-------~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~  234 (297)
T 3g4e_A          168 SLSYSVDAFDYDLQTGQI------SNR-------RSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQ  234 (297)
T ss_dssp             GGGTEEEEEEECTTTCCE------EEE-------EEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEE
T ss_pred             CCCCcEEEEeccCCCCcc------cCc-------EEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEE
Confidence            557889999874211100      000       0000001122457789999999888887778899999999999998


Q ss_pred             eecccccceEEEEEEc-CCCcEEEEee
Q psy17610        478 SLEGSDVAAVNCVDFV-DDGKYFLTGG  503 (515)
Q Consensus       478 ~~~~~~~~~v~~~~~s-~~~~~l~s~~  503 (515)
                      .+..+. ..+++++|. ||++.|..++
T Consensus       235 ~i~~p~-~~~t~~~f~g~d~~~L~vt~  260 (297)
T 3g4e_A          235 TVKLPV-DKTTSCCFGGKNYSEMYVTC  260 (297)
T ss_dssp             EEECSS-SBEEEEEEESGGGCEEEEEE
T ss_pred             EEECCC-CCceEEEEeCCCCCEEEEEc
Confidence            888765 689999998 8887665544

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.64  E-value=6.1e-13  Score=123.23  Aligned_cols=235  Identities=9%  Similarity=-0.041  Sum_probs=165.6

Q ss_pred             CcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCC--cEEEEeCCCCcee
Q psy17610         82 SGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKN--DIRIWSVRTLNEL  159 (515)
Q Consensus        82 ~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~--~i~iw~~~~~~~~  159 (515)
                      .....|+|+|+++++++...++.|++||.+++ .+..+...... .. ++|+|+++.|+++..++  .|.+++...+...
T Consensus       131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g-~~~~~~~~~~~-~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~  207 (409)
T 3hrp_A          131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDN-KVTTVHPGFKG-GK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAP  207 (409)
T ss_dssp             CCEEEEEECSTTEEEEEETTTTEEEEEETTTT-EEEEEEETCCB-CB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCE
T ss_pred             CCceEEEEeCCCCEEEEecCCCcEEEEECCCC-EEEEeeccCCC-Cc-eeEecCCCcEEEEecCCCceEEEEEcCCCcee
Confidence            46889999999997777777789999999985 44444333222 33 99999999999888865  7888888766554


Q ss_pred             EEEE---e-cCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEe---cCCCCCCe--EEEEEcCC-CCEEEEecC
Q psy17610        160 LRIS---V-MNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFII---PNAHNRGV--TALAITQD-GTRLLSGGG  229 (515)
Q Consensus       160 ~~~~---~-~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~---~~~~~~~v--~~~~~~~~-~~~l~~~~~  229 (515)
                      ..+.   . ....+.+++++|++..|+++..++.|..||..++......   ..++...-  ..++|+|+ +.++++-..
T Consensus       208 ~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~  287 (409)
T 3hrp_A          208 TRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN  287 (409)
T ss_dssp             EEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT
T ss_pred             EEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC
Confidence            4441   1 3345678999995556666777889999999877643320   12222222  39999995 666666667


Q ss_pred             CCcEEEEEccCCceeeEEeeccc---------------cCceEEEEEecCCCEEEEEe-CCCcEEEEEcccceEEEEEEc
Q psy17610        230 EGQVRIWKLTRESQSLQCVLKEH---------------TSSVSVIQIKSDSKEAMSAS-TDGTCVLWDLIKSTRLIIMIL  293 (515)
Q Consensus       230 d~~i~iw~~~~~~~~~~~~~~~~---------------~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~  293 (515)
                      ++.|+.|+.+..    ...+.++               -.....++++++++++++-. .++.|+.|++.++........
T Consensus       288 ~~~I~~~~~~g~----~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~  363 (409)
T 3hrp_A          288 LSSVYKITPDGE----CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQ  363 (409)
T ss_dssp             TTEEEEECTTCC----EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEEC
T ss_pred             CCEEEEEecCCC----EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCC
Confidence            889999987532    1122222               13478899999999777777 788999999877765544433


Q ss_pred             ---------------CccEEEEEEcCCCcEEEEEECCCeEEEEeC
Q psy17610        294 ---------------PSMIMSAAYHPSEVQLITCSTNKMIDYWET  323 (515)
Q Consensus       294 ---------------~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~  323 (515)
                                     -.....+++++++.++++-..++.|+.+++
T Consensus       364 ~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~  408 (409)
T 3hrp_A          364 VDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV  408 (409)
T ss_dssp             TTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred             CCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence                           134789999999887777777888887764

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=99.63  E-value=2.1e-10  Score=116.32  Aligned_cols=394  Identities=9%  Similarity=0.002  Sum_probs=239.6

Q ss_pred             CcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeecc-------CccCeEEEEeCCCCcEEEEEecCCcEEEEeCC
Q psy17610         82 SGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTC-------HTSAIYDLQFPVNFSSVFATCSKNDIRIWSVR  154 (515)
Q Consensus        82 ~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-------h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~  154 (515)
                      ..|.++...++|. |.+|+.++-|..||..++. .......       ....|.++...+++...+ ++.+ -+.+||..
T Consensus       163 ~~i~~i~~d~~g~-lwigt~~~Gl~~~~~~~~~-~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lwi-gt~~-Gl~~~d~~  238 (781)
T 3v9f_A          163 EQTWTATEAEDGK-LYIGHVEGGLSILSLNDKS-VKHFVHDPQNPNSLPGNDVRCIYKDTNGNIWI-GTSK-GLALFNAN  238 (781)
T ss_dssp             CCEEEEEEEETTE-EEEEETTTEEEEEETTTTE-EEEECC--------CCSSEEEEEECTTCCEEE-EETT-EEEEEETT
T ss_pred             cceEEEEECCCCC-EEEEecCCCeEEEcCCCCc-eEeeecCCCCcccCCCCceeEEEEcCCCCEEE-EeCC-cHheECCC
Confidence            5688988887776 5556666569999988743 3222110       135689999988875554 4444 68899987


Q ss_pred             CCceeEEEE-------ecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEec-------------CCCCCCeEE
Q psy17610        155 TLNELLRIS-------VMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIP-------------NAHNRGVTA  214 (515)
Q Consensus       155 ~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~-------------~~~~~~v~~  214 (515)
                      +++...-..       .....|.++...++|. |..|+..+-|.+++..+++......             ......|.+
T Consensus       239 ~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~  317 (781)
T 3v9f_A          239 TETFTNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARY  317 (781)
T ss_dssp             TTEEEC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEE
T ss_pred             CCcEEEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEE
Confidence            654322111       1235688888877775 5666664558889987765432211             123457999


Q ss_pred             EEEcCCCCEEEEecCCCcEEEEEccCCceeeEEee-------ccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceE
Q psy17610        215 LAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVL-------KEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTR  287 (515)
Q Consensus       215 ~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~  287 (515)
                      +...++|. |..|+.++-|..++............       .-....|.++...+++. +..|+.++-+..+|..++..
T Consensus       318 i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~  395 (781)
T 3v9f_A          318 IFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVA  395 (781)
T ss_dssp             EEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEE
T ss_pred             EEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeE
Confidence            99998886 55577677788888753332221110       01235688888877765 55667666788999866543


Q ss_pred             EEEE----EcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEec--CCCccEEEEEEcCCCCEEEEEcCCCeE
Q psy17610        288 LIIM----ILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEG--SDVAAVNCVDFVDDGKYFLTGGADQIV  361 (515)
Q Consensus       288 ~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg~i  361 (515)
                      ....    .....+.++...+++...+ ++.++.+..+|..+++.. .+..  .....|.++...++|++.+ |+. +-+
T Consensus       396 ~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~-~~~~~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl  471 (781)
T 3v9f_A          396 IYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQ-IIELEKNELLDVRVFYEDKNKKIWI-GTH-AGV  471 (781)
T ss_dssp             ECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEE-ECCSTTTCCCCEEEEEECTTSEEEE-EET-TEE
T ss_pred             EEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEE-EeccCCCCCCeEEEEEECCCCCEEE-EEC-Cce
Confidence            2211    1224688888887777555 666677889998776543 2221  1236788998888887544 454 458


Q ss_pred             EEEEccCCeeeeeccCC-----CCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeeccccccccee
Q psy17610        362 KMWMYREGVPCFVGIGH-----AASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLI  436 (515)
Q Consensus       362 ~i~d~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  436 (515)
                      ..+|..+++........     ...|.++...+++++.+ ++.++.+..|+........         ...    .    
T Consensus       472 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~---------~~~----~----  533 (781)
T 3v9f_A          472 FVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGGGVGIYTPDMQLVRK---------FNQ----Y----  533 (781)
T ss_dssp             EEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEE-EESSSCEEEECTTCCEEEE---------ECT----T----
T ss_pred             EEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEE-EEcCCCEEEEeCCCCeEEE---------ccC----C----
Confidence            88998776443322111     46789999999888655 4454447778765432100         000    0    


Q ss_pred             eecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeee--ecccccceEEEEEEcCCCcEEEEeecCC
Q psy17610        437 IMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRS--LEGSDVAAVNCVDFVDDGKYFLTGGADQ  506 (515)
Q Consensus       437 ~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~s~~~dg  506 (515)
                      .......|.++...++|.+.+.. .+|.+..||..+++...-  ..+-....|.++...++|++.+++ .+|
T Consensus       534 ~~l~~~~i~~i~~d~~g~lWi~T-~~Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t-~~G  603 (781)
T 3v9f_A          534 EGFCSNTINQIYRSSKGQMWLAT-GEGLVCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWAST-NTG  603 (781)
T ss_dssp             TTCSCSCEEEEEECTTSCEEEEE-TTEEEEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSCEEEEC-SSC
T ss_pred             CCCCCCeeEEEEECCCCCEEEEE-CCCceEEECCCCCcEEEccccCCCCCceEEEEEECCCCCEEEEc-CCc
Confidence            00122458888888888865544 467558899877653221  112222467889999889866654 555

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=99.62  E-value=3.1e-13  Score=133.67  Aligned_cols=261  Identities=13%  Similarity=0.162  Sum_probs=178.7

Q ss_pred             CCEEEEEecCceEEEEECCCCceeEEeecc-CccCeEEEEeCC---CCcEEEEEec------CCcEEEEeCCCCceeEEE
Q psy17610         93 NNKVFVGTVNCEIFLIDMNSGFTLTLVNTC-HTSAIYDLQFPV---NFSSVFATCS------KNDIRIWSVRTLNELLRI  162 (515)
Q Consensus        93 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-h~~~v~~~~~~~---~~~~l~~~~~------d~~i~iw~~~~~~~~~~~  162 (515)
                      +..+++++.|+.|..+|.++|+.+-..... +......+..+|   ++ .+++++.      ++.|..||.++|+.+.++
T Consensus       121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~  199 (689)
T 1yiq_A          121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRF  199 (689)
T ss_dssp             TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred             CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEe
Confidence            567888999999999999999777655432 221111222233   44 5555543      688999999999999887


Q ss_pred             EecC-------------------------------eEEEEEEEeeCCCEEEEEeCCCe-------------------EEE
Q psy17610        163 SVMN-------------------------------MICACIVFTYDGKAILSGWNDGF-------------------IRC  192 (515)
Q Consensus       163 ~~~~-------------------------------~~v~~~~~~~~~~~l~~~~~dg~-------------------i~~  192 (515)
                      ....                               .....++++|++..++.+..++.                   |..
T Consensus       200 ~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~A  279 (689)
T 1yiq_A          200 YTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVA  279 (689)
T ss_dssp             ESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEE
T ss_pred             cccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEE
Confidence            6210                               01125788888889998887764                   999


Q ss_pred             EecCCCceEEEecCC-CC-------CCeEEEEEcCCCC---EEEEecCCCcEEEEEccCCceeeEEeecc----------
Q psy17610        193 FTPQSGKLKFIIPNA-HN-------RGVTALAITQDGT---RLLSGGGEGQVRIWKLTRESQSLQCVLKE----------  251 (515)
Q Consensus       193 ~~~~~~~~~~~~~~~-~~-------~~v~~~~~~~~~~---~l~~~~~d~~i~iw~~~~~~~~~~~~~~~----------  251 (515)
                      +|.++|+.+..+... |.       .+........+|+   .++.++.+|.++++|..+.+......+..          
T Consensus       280 lD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~  359 (689)
T 1yiq_A          280 VNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMK  359 (689)
T ss_dssp             EETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETT
T ss_pred             EEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCcc
Confidence            999999998877433 21       1222222223554   78889999999999986544321111100          


Q ss_pred             ----------------ccC-----------ceEEEEEecCCCEEEEEeC-------------------------------
Q psy17610        252 ----------------HTS-----------SVSVIQIKSDSKEAMSAST-------------------------------  273 (515)
Q Consensus       252 ----------------~~~-----------~v~~~~~~~~~~~l~~~~~-------------------------------  273 (515)
                                      ...           .-..++++|+..++++...                               
T Consensus       360 ~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  439 (689)
T 1yiq_A          360 TGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMM  439 (689)
T ss_dssp             TTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCC
T ss_pred             CCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCcccccc
Confidence                            000           0113678888887776532                               


Q ss_pred             --------------CCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCcc
Q psy17610        274 --------------DGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAA  339 (515)
Q Consensus       274 --------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~  339 (515)
                                    +|.|..||+.+++.+.....+.+.....+...+..++.++.|+.++.||.++++.+.++.......
T Consensus       440 p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~  519 (689)
T 1yiq_A          440 PEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVM  519 (689)
T ss_dssp             CSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCC
T ss_pred             CcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcc
Confidence                          377999999999999888877665555666788899999999999999999999999998765333


Q ss_pred             EEEEEEcCCCCEEEE
Q psy17610        340 VNCVDFVDDGKYFLT  354 (515)
Q Consensus       340 i~~~~~~~~~~~l~~  354 (515)
                      ..-+.|..+|+.+++
T Consensus       520 ~~p~ty~~~G~qyv~  534 (689)
T 1yiq_A          520 AAPVTYSVDGEQYVT  534 (689)
T ss_dssp             SCCEEEEETTEEEEE
T ss_pred             cCceEEEECCEEEEE
Confidence            345677778875443

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=99.62  E-value=3.9e-13  Score=132.71  Aligned_cols=313  Identities=12%  Similarity=0.127  Sum_probs=212.1

Q ss_pred             CCEEEEEecCceEEEEECCCCceeEEeeccCcc----------CeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEE
Q psy17610         93 NNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTS----------AIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRI  162 (515)
Q Consensus        93 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~----------~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~  162 (515)
                      +..|++++.++.|+-+|..+|+.+-........          .-..+++  ++..+++++.|+.+..+|..+|+.+.++
T Consensus        77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W~~  154 (677)
T 1kb0_A           77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVWHQ  154 (677)
T ss_dssp             TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEeee
Confidence            667888888899999999998776554322110          0012223  3568888899999999999999999988


Q ss_pred             Eec-C----eEEEEEEEeeCCCEEEEEeC------CCeEEEEecCCCceEEEecCCCCC---------------------
Q psy17610        163 SVM-N----MICACIVFTYDGKAILSGWN------DGFIRCFTPQSGKLKFIIPNAHNR---------------------  210 (515)
Q Consensus       163 ~~~-~----~~v~~~~~~~~~~~l~~~~~------dg~i~~~~~~~~~~~~~~~~~~~~---------------------  210 (515)
                      ... .    ..+.+.-.. .+..+++++.      ++.|+.+|.++|+.+..+......                     
T Consensus       155 ~~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g  233 (677)
T 1kb0_A          155 NTFEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSG  233 (677)
T ss_dssp             ETTTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGG
T ss_pred             cCCcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccC
Confidence            754 2    112111111 2345665553      689999999999998776432111                     


Q ss_pred             ----------CeEEEEEcCCCCEEEEecCCC-------------------cEEEEEccCCceeeEEeecccc-------C
Q psy17610        211 ----------GVTALAITQDGTRLLSGGGEG-------------------QVRIWKLTRESQSLQCVLKEHT-------S  254 (515)
Q Consensus       211 ----------~v~~~~~~~~~~~l~~~~~d~-------------------~i~iw~~~~~~~~~~~~~~~~~-------~  254 (515)
                                ....++++|++..++.+..++                   .|..+|..+++.........|.       .
T Consensus       234 ~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~  313 (677)
T 1kb0_A          234 KWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQ  313 (677)
T ss_dssp             CHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCS
T ss_pred             ceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCC
Confidence                      113578889888888887664                   4888888655444443333331       1


Q ss_pred             ceEEEEEecCC---CEEEEEeCCCcEEEEEcccceEEEEEEcCc------------cE----------------------
Q psy17610        255 SVSVIQIKSDS---KEAMSASTDGTCVLWDLIKSTRLIIMILPS------------MI----------------------  297 (515)
Q Consensus       255 ~v~~~~~~~~~---~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~------------~~----------------------  297 (515)
                      ....+....+|   ..++.++.+|.++++|..+++.+.......            ++                      
T Consensus       314 ~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~  393 (677)
T 1kb0_A          314 PMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAH  393 (677)
T ss_dssp             CCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSS
T ss_pred             CcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCccccc
Confidence            22333444577   678899999999999999999887665321            01                      


Q ss_pred             --EEEEEcCCCcEEEEEEC-------------------------------------------CCeEEEEeCCCCceEEEE
Q psy17610        298 --MSAAYHPSEVQLITCST-------------------------------------------NKMIDYWETCDGSIIRSL  332 (515)
Q Consensus       298 --~~~~~~~~~~~l~~~~~-------------------------------------------~~~i~~~d~~~~~~~~~~  332 (515)
                        ..++++|+...+++...                                           .+.|..||+.+++.+.++
T Consensus       394 ~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~  473 (677)
T 1kb0_A          394 NWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSV  473 (677)
T ss_dssp             CSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEE
T ss_pred             CCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeec
Confidence              14688898888877543                                           178999999999998888


Q ss_pred             ecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCC-CCeeEEEECCCCcEEEEE-eC-----------
Q psy17610        333 EGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHA-ASITKIKISPDKKVIVSV-SA-----------  399 (515)
Q Consensus       333 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~-~~-----------  399 (515)
                      ...  .+.....+..++.++++++.||.+++||.++++.+..+.... ..-.-+.|..+|+.++.. +.           
T Consensus       474 ~~~--~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~~~~G~~~~~~~~~~~  551 (677)
T 1kb0_A          474 EHV--SPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVSVAVGWGGVYGLAARA  551 (677)
T ss_dssp             EES--SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEECCCHHHHHHCCS
T ss_pred             CCC--CCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEEEEeccCCccccccccc
Confidence            754  333444566677888999999999999999999998876433 233446666788654443 22           


Q ss_pred             -----CCcEEEEeCCC
Q psy17610        400 -----DGGIFLWTFPE  410 (515)
Q Consensus       400 -----dg~i~iw~~~~  410 (515)
                           .+.+..|.+..
T Consensus       552 ~~~~~~~~l~~f~l~~  567 (677)
T 1kb0_A          552 TERQGPGTVYTFVVGG  567 (677)
T ss_dssp             CSCCCCCEEEEEEETC
T ss_pred             cccCCCCeEEEEeccc
Confidence                 36778888763

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=99.62  E-value=1.4e-09  Score=110.36  Aligned_cols=397  Identities=13%  Similarity=0.103  Sum_probs=238.5

Q ss_pred             CCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeec-------cCccCeEEEEeCCCCcEEEEEecCCcEEEEeC
Q psy17610         81 DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNT-------CHTSAIYDLQFPVNFSSVFATCSKNDIRIWSV  153 (515)
Q Consensus        81 ~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~  153 (515)
                      ...|.++...++|.+. +|+.+ -|.+||..++. ......       .....|.++...++| .|..++..+-|.++|.
T Consensus       210 ~~~i~~i~~d~~g~lw-igt~~-Gl~~~d~~~~~-~~~~~~~~~~~~~l~~~~i~~i~~d~~g-~lWigt~~~Gl~~~~~  285 (781)
T 3v9f_A          210 GNDVRCIYKDTNGNIW-IGTSK-GLALFNANTET-FTNFHNNPGNIHGALSSYIFSIKQLKDN-KLWIATELNGIMILDL  285 (781)
T ss_dssp             CSSEEEEEECTTCCEE-EEETT-EEEEEETTTTE-EEC-----------CCCCEEEEEECTTS-EEEEEESSSCEEEEET
T ss_pred             CCceeEEEEcCCCCEE-EEeCC-cHheECCCCCc-EEEEEcCCCccccccCceEEEEEECCCC-CEEEEeCCCCeEEECC
Confidence            3579999998888754 45555 59999987743 222211       123569999998887 5556666566888998


Q ss_pred             CCCceeEEEE--------------ecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEec--------CCCCCC
Q psy17610        154 RTLNELLRIS--------------VMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIP--------NAHNRG  211 (515)
Q Consensus       154 ~~~~~~~~~~--------------~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~--------~~~~~~  211 (515)
                      .+++......              .....|.++...++|. |..|+.++-|..++..++.......        ......
T Consensus       286 ~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  364 (781)
T 3v9f_A          286 QQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKV  364 (781)
T ss_dssp             TCC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSC
T ss_pred             CCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcc
Confidence            7654322111              1234688888888886 6667766668899887665433211        112356


Q ss_pred             eEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEe-eccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEE
Q psy17610        212 VTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCV-LKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLII  290 (515)
Q Consensus       212 v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~  290 (515)
                      |.++...++|. |..|+.++-|..|+........... .......|.++...+++. |..++.++-+..+|..+++....
T Consensus       365 v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~  442 (781)
T 3v9f_A          365 VSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGN-LWFGTYLGNISYYNTRLKKFQII  442 (781)
T ss_dssp             EEEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSC-EEEEETTEEEEEECSSSCEEEEC
T ss_pred             eEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCC-EEEEeccCCEEEEcCCCCcEEEe
Confidence            89999988876 4556666678889874321111100 012345688888877765 55577666788998876654332


Q ss_pred             EE---cCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecC----CCccEEEEEEcCCCCEEEEEcCCCeEEE
Q psy17610        291 MI---LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGS----DVAAVNCVDFVDDGKYFLTGGADQIVKM  363 (515)
Q Consensus       291 ~~---~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~~~~dg~i~i  363 (515)
                      ..   ....+.++...+++...+ ++. +-+..+|..+++........    ....+.++...++|++.+ |+.++-+..
T Consensus       443 ~~~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~  519 (781)
T 3v9f_A          443 ELEKNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGGGVGI  519 (781)
T ss_dssp             CSTTTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEE-EESSSCEEE
T ss_pred             ccCCCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEE-EEcCCCEEE
Confidence            21   124688888888877555 444 56889998876654333221    125788999999888555 444334777


Q ss_pred             EEccCCeeeeeccC---CCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecC
Q psy17610        364 WMYREGVPCFVGIG---HAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMIL  440 (515)
Q Consensus       364 ~d~~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  440 (515)
                      +|..+++.......   ....|.++...+++.+.+.. .+|.+..||........         ....    .    ...
T Consensus       520 ~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T-~~Glv~~~d~~~~~~~~---------~~~~----~----gl~  581 (781)
T 3v9f_A          520 YTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLAT-GEGLVCFPSARNFDYQV---------FQRK----E----GLP  581 (781)
T ss_dssp             ECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEE-TTEEEEESCTTTCCCEE---------ECGG----G----TCS
T ss_pred             EeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEE-CCCceEEECCCCCcEEE---------cccc----C----CCC
Confidence            88766543322111   23578999999998866544 46654788765432100         0000    0    001


Q ss_pred             cccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeec---cccc--ceEEEEEEcCCCcEEEEeecCCeEE
Q psy17610        441 PSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLE---GSDV--AAVNCVDFVDDGKYFLTGGADQIVK  509 (515)
Q Consensus       441 ~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~---~~~~--~~v~~~~~s~~~~~l~s~~~dg~v~  509 (515)
                      ...+.++...++|.+.+++ .+| |..++..+++.. .+.   +...  -...++...++|+++ .|+.+|.++
T Consensus       582 ~~~i~~i~~d~~g~lW~~t-~~G-l~~~~~~~~~~~-~~~~~dGl~~~~f~~~~~~~~~~G~l~-~g~~~Gl~~  651 (781)
T 3v9f_A          582 NTHIRAISEDKNGNIWAST-NTG-ISCYITSKKCFY-TYDHSNNIPQGSFISGCVTKDHNGLIY-FGSINGLCF  651 (781)
T ss_dssp             CCCCCEEEECSSSCEEEEC-SSC-EEEEETTTTEEE-EECGGGTCCSSCEEEEEEEECTTSCEE-EEETTEEEE
T ss_pred             CceEEEEEECCCCCEEEEc-CCc-eEEEECCCCceE-EecccCCccccccccCceEECCCCEEE-EECCCceEE
Confidence            1336778888888766654 455 777887765432 222   1111  224567778888854 466777544

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.61  E-value=1.9e-12  Score=119.87  Aligned_cols=235  Identities=12%  Similarity=0.085  Sum_probs=163.5

Q ss_pred             EEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCC--cEEEEEccCCcee-
Q psy17610        168 ICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEG--QVRIWKLTRESQS-  244 (515)
Q Consensus       168 ~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~iw~~~~~~~~-  244 (515)
                      ....++|+++++.+++...++.|+.||+.+++...... .. .... ++|+++++.|+++..++  .|.+++....... 
T Consensus       132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~-~~-~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~  208 (409)
T 3hrp_A          132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHP-GF-KGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPT  208 (409)
T ss_dssp             CEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEE-TC-CBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred             CceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeec-cC-CCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeE
Confidence            46789999999877777777999999999887765542 22 2233 89999999988888766  6888887533221 


Q ss_pred             eEEee-ccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEE----EEcCcc--EE-EEEEcCC-CcEEEEEECC
Q psy17610        245 LQCVL-KEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLII----MILPSM--IM-SAAYHPS-EVQLITCSTN  315 (515)
Q Consensus       245 ~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~----~~~~~~--~~-~~~~~~~-~~~l~~~~~~  315 (515)
                      ..... ......+..++++|++..|+.+..++.|+.||..++.....    ......  .. .++++|+ +.++++-..+
T Consensus       209 ~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~  288 (409)
T 3hrp_A          209 RIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNL  288 (409)
T ss_dssp             EEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTT
T ss_pred             EeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCC
Confidence            11111 21445678899999656666677788999999987764332    111111  13 8999996 5555555667


Q ss_pred             CeEEEEeCCCCceEEEEecCC--------------CccEEEEEEcCCCCEEEEEc-CCCeEEEEEccCCeeeeeccCC--
Q psy17610        316 KMIDYWETCDGSIIRSLEGSD--------------VAAVNCVDFVDDGKYFLTGG-ADQIVKMWMYREGVPCFVGIGH--  378 (515)
Q Consensus       316 ~~i~~~d~~~~~~~~~~~~~~--------------~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~--  378 (515)
                      +.|+.|+....  ...+.+..              ......++++|+|+++++-. .++.|+.|++.+++.. .+.++  
T Consensus       289 ~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~-~~~g~~~  365 (409)
T 3hrp_A          289 SSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVS-TVAGQVD  365 (409)
T ss_dssp             TEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEE-EEEECTT
T ss_pred             CEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEE-EEeCCCC
Confidence            89999987543  33332221              13478999999999888887 8899999998777543 33232  


Q ss_pred             -------------CCCeeEEEECCCCcEEEEEeCCCcEEEEeC
Q psy17610        379 -------------AASITKIKISPDKKVIVSVSADGGIFLWTF  408 (515)
Q Consensus       379 -------------~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~  408 (515)
                                   -.....+++++++.++++-..++.|+.+++
T Consensus       366 ~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~  408 (409)
T 3hrp_A          366 VASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV  408 (409)
T ss_dssp             CBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred             CCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence                         245789999999888887777888888764

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=99.61  E-value=8.8e-13  Score=130.15  Aligned_cols=261  Identities=13%  Similarity=0.145  Sum_probs=181.2

Q ss_pred             CCCEEEEEecCceEEEEECCCCceeEEeecc-Cc---cCeEE-EEeCCCCcEEEEEec------CCcEEEEeCCCCceeE
Q psy17610         92 VNNKVFVGTVNCEIFLIDMNSGFTLTLVNTC-HT---SAIYD-LQFPVNFSSVFATCS------KNDIRIWSVRTLNELL  160 (515)
Q Consensus        92 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-h~---~~v~~-~~~~~~~~~l~~~~~------d~~i~iw~~~~~~~~~  160 (515)
                      ++..|++++.|+.|..+|..+|+.+-....+ ..   ..+.. ...  .+..+++++.      ++.|..+|.++|+.+.
T Consensus       127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W  204 (677)
T 1kb0_A          127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKW  204 (677)
T ss_dssp             ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred             ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEE
Confidence            3667888899999999999998776655432 10   11111 111  1346666654      6899999999999998


Q ss_pred             EEEecCeE--------------------------------EEEEEEeeCCCEEEEEeCCC-------------------e
Q psy17610        161 RISVMNMI--------------------------------CACIVFTYDGKAILSGWNDG-------------------F  189 (515)
Q Consensus       161 ~~~~~~~~--------------------------------v~~~~~~~~~~~l~~~~~dg-------------------~  189 (515)
                      ++......                                ...++++|++..++.+..++                   .
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~s  284 (677)
T 1kb0_A          205 RWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLAS  284 (677)
T ss_dssp             EEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTE
T ss_pred             EeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEE
Confidence            87642211                                12467889999888887664                   5


Q ss_pred             EEEEecCCCceEEEecCCCC--------CCeEEEEEcCCC---CEEEEecCCCcEEEEEccCCceeeEEeecc-------
Q psy17610        190 IRCFTPQSGKLKFIIPNAHN--------RGVTALAITQDG---TRLLSGGGEGQVRIWKLTRESQSLQCVLKE-------  251 (515)
Q Consensus       190 i~~~~~~~~~~~~~~~~~~~--------~~v~~~~~~~~~---~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~-------  251 (515)
                      |..+|.++|+.+..+...+.        .....+....+|   ..++.++.+|.+.++|..+.+......+..       
T Consensus       285 v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~  364 (677)
T 1kb0_A          285 IVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGY  364 (677)
T ss_dssp             EEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEE
T ss_pred             EEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCccccc
Confidence            99999999999887653322        222333444467   678899999999999986544322211110       


Q ss_pred             --ccCce------------------------EEEEEecCCCEEEEEeC--------------------------------
Q psy17610        252 --HTSSV------------------------SVIQIKSDSKEAMSAST--------------------------------  273 (515)
Q Consensus       252 --~~~~v------------------------~~~~~~~~~~~l~~~~~--------------------------------  273 (515)
                        ...++                        ..++++|++.++++...                                
T Consensus       365 d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~  444 (677)
T 1kb0_A          365 DKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAK  444 (677)
T ss_dssp             CTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCE
T ss_pred             CCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccccccccccccc
Confidence              00001                        14688898888877543                                


Q ss_pred             -----------CCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEE
Q psy17610        274 -----------DGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNC  342 (515)
Q Consensus       274 -----------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~  342 (515)
                                 .|.|..||+.+++.+.......+.....+...+..++.++.++.+++||..+++.+.++.........-
T Consensus       445 ~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p  524 (677)
T 1kb0_A          445 FFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAP  524 (677)
T ss_dssp             EECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCC
T ss_pred             ccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCC
Confidence                       178999999999999888877666666677788888899999999999999999999998765344445


Q ss_pred             EEEcCCCCEEEE
Q psy17610        343 VDFVDDGKYFLT  354 (515)
Q Consensus       343 ~~~~~~~~~l~~  354 (515)
                      +.+..+|+.+++
T Consensus       525 ~~y~~~G~~~v~  536 (677)
T 1kb0_A          525 STYMVDGRQYVS  536 (677)
T ss_dssp             EEEEETTEEEEE
T ss_pred             EEEEeCCEEEEE
Confidence            667778875543

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.61  E-value=6.2e-12  Score=111.66  Aligned_cols=227  Identities=12%  Similarity=0.068  Sum_probs=156.7

Q ss_pred             CCCcEEEEEEecCCC-EEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCce
Q psy17610         80 DDSGISSLQYNPVNN-KVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNE  158 (515)
Q Consensus        80 ~~~~v~~~~~s~~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~  158 (515)
                      +..---+..|+|++. ++++...++.|+.||..++.. .. .. ....+.+++++|+|+.++ +. ++.|.+||.++++.
T Consensus        11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~-~~-~~~~~~~i~~~~dG~l~v-~~-~~~l~~~d~~~g~~   85 (297)
T 3g4e_A           11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QR-VT-MDAPVSSVALRQSGGYVA-TI-GTKFCALNWKEQSA   85 (297)
T ss_dssp             CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EE-EE-CSSCEEEEEEBTTSSEEE-EE-TTEEEEEETTTTEE
T ss_pred             CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EE-Ee-CCCceEEEEECCCCCEEE-EE-CCeEEEEECCCCcE
Confidence            344566889999654 555566778999999998543 22 22 456799999999998444 43 67899999987764


Q ss_pred             eEEEEe----cCeEEEEEEEeeCCCEEEEEeC-----------CCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCE
Q psy17610        159 LLRISV----MNMICACIVFTYDGKAILSGWN-----------DGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTR  223 (515)
Q Consensus       159 ~~~~~~----~~~~v~~~~~~~~~~~l~~~~~-----------dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  223 (515)
                      ......    ....+..++++|+|+++++...           .+.|..++.. ++.....  .+....+.++|+|+++.
T Consensus        86 ~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~--~~~~~pngi~~spdg~~  162 (297)
T 3g4e_A           86 VVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKYF--DQVDISNGLDWSLDHKI  162 (297)
T ss_dssp             EEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEEE--EEESBEEEEEECTTSCE
T ss_pred             EEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEEEe--eccccccceEEcCCCCE
Confidence            333222    2346789999999996665432           2334444443 3333222  23345689999999987


Q ss_pred             EE-EecCCCcEEEEEccCCcee-----eEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC-cc
Q psy17610        224 LL-SGGGEGQVRIWKLTRESQS-----LQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP-SM  296 (515)
Q Consensus       224 l~-~~~~d~~i~iw~~~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~~  296 (515)
                      |+ +.+.++.|.+|+++.....     ....+..+......++++++|++.++....+.|..||..+++.+..+..+ ..
T Consensus       163 lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~  242 (297)
T 3g4e_A          163 FYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDK  242 (297)
T ss_dssp             EEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSB
T ss_pred             EEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCC
Confidence            65 4556788999997422221     12223334456788999999987777777888999999989988888877 57


Q ss_pred             EEEEEEc-CCCcEEEEEEC
Q psy17610        297 IMSAAYH-PSEVQLITCST  314 (515)
Q Consensus       297 ~~~~~~~-~~~~~l~~~~~  314 (515)
                      +.+++|. |+++.|++++.
T Consensus       243 ~t~~~f~g~d~~~L~vt~~  261 (297)
T 3g4e_A          243 TTSCCFGGKNYSEMYVTCA  261 (297)
T ss_dssp             EEEEEEESGGGCEEEEEEB
T ss_pred             ceEEEEeCCCCCEEEEEcC
Confidence            9999998 88887776654

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=99.60  E-value=5.5e-13  Score=131.91  Aligned_cols=300  Identities=12%  Similarity=0.139  Sum_probs=199.9

Q ss_pred             CCCEEEEEecCceEEEEECCCCceeEEeeccCcc---------Ce-EEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEE
Q psy17610         92 VNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTS---------AI-YDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLR  161 (515)
Q Consensus        92 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~---------~v-~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~  161 (515)
                      .+..|++++.++.|+-+|..+|+.+-........         .+ ..++.  ++..+++++.|+.+..+|.++|+.+.+
T Consensus        69 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W~  146 (689)
T 1yiq_A           69 VDGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAWS  146 (689)
T ss_dssp             ETTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred             ECCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEeee
Confidence            3667888888999999999998776654321110         00 11222  345888888999999999999999988


Q ss_pred             EEec-C----eEEEEEEEeeCCCEEEEEe------CCCeEEEEecCCCceEEEecCCC-C--------------------
Q psy17610        162 ISVM-N----MICACIVFTYDGKAILSGW------NDGFIRCFTPQSGKLKFIIPNAH-N--------------------  209 (515)
Q Consensus       162 ~~~~-~----~~v~~~~~~~~~~~l~~~~------~dg~i~~~~~~~~~~~~~~~~~~-~--------------------  209 (515)
                      +... .    ..+.+.-.-.++ .++++.      .+|.|..||.++|+.+..+.... .                    
T Consensus       147 ~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~  225 (689)
T 1yiq_A          147 VDTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGD  225 (689)
T ss_dssp             EECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSS
T ss_pred             ecCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCc
Confidence            7753 1    111110011144 455543      36899999999999987763211 0                    


Q ss_pred             ---------CCeEEEEEcCCCCEEEEecCCCc-------------------EEEEEccCCceeeEEeecccc-------C
Q psy17610        210 ---------RGVTALAITQDGTRLLSGGGEGQ-------------------VRIWKLTRESQSLQCVLKEHT-------S  254 (515)
Q Consensus       210 ---------~~v~~~~~~~~~~~l~~~~~d~~-------------------i~iw~~~~~~~~~~~~~~~~~-------~  254 (515)
                               .....++++|++..++.+..++.                   |..+|.++++.........|.       .
T Consensus       226 ~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~  305 (689)
T 1yiq_A          226 AYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQ  305 (689)
T ss_dssp             THHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCS
T ss_pred             eeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCC
Confidence                     01125788898888998887764                   899998655544433332232       1


Q ss_pred             ceEEEEEecCCC---EEEEEeCCCcEEEEEcccceEEEEEEcCc------------------------------------
Q psy17610        255 SVSVIQIKSDSK---EAMSASTDGTCVLWDLIKSTRLIIMILPS------------------------------------  295 (515)
Q Consensus       255 ~v~~~~~~~~~~---~l~~~~~d~~i~iwd~~~~~~~~~~~~~~------------------------------------  295 (515)
                      +........+|+   .++.++.+|.++++|.++++.+.......                                    
T Consensus       306 ~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~  385 (689)
T 1yiq_A          306 HMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAF  385 (689)
T ss_dssp             CEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCT
T ss_pred             CcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCc
Confidence            222223333565   68889999999999999999875443221                                    


Q ss_pred             ----cEEEEEEcCCCcEEEEEEC---------------------------------------------CCeEEEEeCCCC
Q psy17610        296 ----MIMSAAYHPSEVQLITCST---------------------------------------------NKMIDYWETCDG  326 (515)
Q Consensus       296 ----~~~~~~~~~~~~~l~~~~~---------------------------------------------~~~i~~~d~~~~  326 (515)
                          .-..++++|+...+++...                                             +|.|..||+.++
T Consensus       386 ~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG  465 (689)
T 1yiq_A          386 WGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQ  465 (689)
T ss_dssp             TCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTT
T ss_pred             ccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCC
Confidence                0112678888887776532                                             377999999999


Q ss_pred             ceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCC-eeEEEECCCCcEEEE
Q psy17610        327 SIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAAS-ITKIKISPDKKVIVS  396 (515)
Q Consensus       327 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-i~~~~~~~~~~~l~~  396 (515)
                      +.+.++..+.  +.....+...+.+++.++.||.++.||.++|+.+..+...... -.-+.|..+|+..++
T Consensus       466 ~~~W~~~~~~--~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv~  534 (689)
T 1yiq_A          466 QAAWEVPYVT--IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYVT  534 (689)
T ss_dssp             EEEEEEEESS--SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred             CeEeEccCCC--CccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEEE
Confidence            9998887653  2333355567789999999999999999999999887644332 244677778874443

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.60  E-value=4.3e-14  Score=127.44  Aligned_cols=176  Identities=9%  Similarity=0.012  Sum_probs=135.9

Q ss_pred             cEEEEEEecCCCEEEEEecCceEEEEECCCCc---------eeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeC
Q psy17610         83 GISSLQYNPVNNKVFVGTVNCEIFLIDMNSGF---------TLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSV  153 (515)
Q Consensus        83 ~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~---------~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~  153 (515)
                      +++.+++++...++++|+.+ .+.+|++++..         ........+.. |+.++|  |+..|+++ .++.|++||+
T Consensus        39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv  113 (388)
T 1xip_A           39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDL  113 (388)
T ss_dssp             CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEES
T ss_pred             cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEc
Confidence            68999999999999999988 56679876432         01111223666 999999  88888888 8899999999


Q ss_pred             CCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcE
Q psy17610        154 RTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQV  233 (515)
Q Consensus       154 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i  233 (515)
                      .+.........+...+..+.+.+.  .+++++.||.+.+||+.++....     +...|++++|+|+|  ++.|..||.+
T Consensus       114 ~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~-----~~~~Vs~v~WSpkG--~~vg~~dg~i  184 (388)
T 1xip_A          114 EELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ-----LAQNVTSFDVTNSQ--LAVLLKDRSF  184 (388)
T ss_dssp             SSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE-----EEESEEEEEECSSE--EEEEETTSCE
T ss_pred             hhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc-----ccCCceEEEEcCCc--eEEEEcCCcE
Confidence            988777777777888887776654  38889999999999999887653     34689999999999  6788999999


Q ss_pred             EEEEccCCceeeEEee------c---cccCceEEEEEecCCCEEEEEe
Q psy17610        234 RIWKLTRESQSLQCVL------K---EHTSSVSVIQIKSDSKEAMSAS  272 (515)
Q Consensus       234 ~iw~~~~~~~~~~~~~------~---~~~~~v~~~~~~~~~~~l~~~~  272 (515)
                      ++|+...........+      .   +|...|.++.|.+++.++++-.
T Consensus       185 ~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~  232 (388)
T 1xip_A          185 QSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG  232 (388)
T ss_dssp             EEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred             EEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence            9998854332112333      2   3678899999999988877533

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=99.60  E-value=2.3e-13  Score=122.54  Aligned_cols=267  Identities=7%  Similarity=-0.040  Sum_probs=183.2

Q ss_pred             eEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEe----------cCCcEEEEeCCCCceeEEEEecC-------
Q psy17610        104 EIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATC----------SKNDIRIWSVRTLNELLRISVMN-------  166 (515)
Q Consensus       104 ~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~----------~d~~i~iw~~~~~~~~~~~~~~~-------  166 (515)
                      +|.++|..+++.+..+..+. .+  .+.++||+++++++.          .++.|.+||+.+++.+.++..+.       
T Consensus        47 ~vsvID~~t~~v~~~i~vG~-~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g  123 (368)
T 1mda_H           47 ENWVSCAGCGVTLGHSLGAF-LS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVG  123 (368)
T ss_dssp             EEEEEETTTTEEEEEEEECT-TC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBS
T ss_pred             eEEEEECCCCeEEEEEeCCC-CC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccC
Confidence            89999999976666665554 35  799999999999987          36889999999999999987541       


Q ss_pred             eEEEEEEEeeCCCEEEEEeC--CCeEEE--EecCCCceEEEecCCCCCCeEEEEEcCCC-CEEEEecCCCcEEEEEccCC
Q psy17610        167 MICACIVFTYDGKAILSGWN--DGFIRC--FTPQSGKLKFIIPNAHNRGVTALAITQDG-TRLLSGGGEGQVRIWKLTRE  241 (515)
Q Consensus       167 ~~v~~~~~~~~~~~l~~~~~--dg~i~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iw~~~~~  241 (515)
                      .....++++|||++++++..  +..+.+  +|+.+   ...+..+..     ..+.|++ ..+++.+.|+.+.+.++...
T Consensus       124 ~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~-----~~~~p~g~~~~~~~~~dg~~~~vd~~~~  195 (368)
T 1mda_H          124 PRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASC-----FHIHPGAAATHYLGSCPASLAASDLAAA  195 (368)
T ss_dssp             CCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSC-----CCCEEEETTEEECCCCTTSCEEEECCSS
T ss_pred             CCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCc-----eEEccCCCeEEEEEcCCCCEEEEECccc
Confidence            23457899999999998874  467888  99887   344432211     1223433 34556677888888887530


Q ss_pred             ---ceeeEE----eeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccce--EEEEEEcC-----------ccEEEEE
Q psy17610        242 ---SQSLQC----VLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKST--RLIIMILP-----------SMIMSAA  301 (515)
Q Consensus       242 ---~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~-----------~~~~~~~  301 (515)
                         ..+...    .+.-...+.   . .+++..++..+. +.+.+.|.....  ....+...           .....++
T Consensus       196 ~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~  270 (368)
T 1mda_H          196 PAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVA  270 (368)
T ss_dssp             CCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEE
T ss_pred             cccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeE
Confidence               011110    011112232   3 677777777777 899999986532  22222111           1112268


Q ss_pred             EcCCCcEEEEEEC---------CCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCC-EEEEEc-CCCeEEEEEccCCe
Q psy17610        302 YHPSEVQLITCST---------NKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGK-YFLTGG-ADQIVKMWMYREGV  370 (515)
Q Consensus       302 ~~~~~~~l~~~~~---------~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~-~dg~i~i~d~~~~~  370 (515)
                      ++|++++++++..         .+.+.++|+.+.+.+..+...  .....++|+|||+ ++++.. .++.|.++|+.+++
T Consensus       271 ~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg--~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~k  348 (368)
T 1mda_H          271 KLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNG--HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQ  348 (368)
T ss_dssp             EETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEE--EEECEEEECCSSSCEEEEEETTTTEEEEEESSSCE
T ss_pred             EcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECC--CCcceEEECCCCCEEEEEccCCCCeEEEEECCCCc
Confidence            9999998887643         245679999999999888765  4688999999998 455555 58999999999999


Q ss_pred             eeeeccCCCCCeeEEEECC
Q psy17610        371 PCFVGIGHAASITKIKISP  389 (515)
Q Consensus       371 ~~~~~~~~~~~i~~~~~~~  389 (515)
                      .+.++..... ...+++.+
T Consensus       349 vv~~I~vg~~-P~~i~~~~  366 (368)
T 1mda_H          349 DQSSVELDKG-PESLSVQN  366 (368)
T ss_dssp             EEEECCCCSC-CCEEECCC
T ss_pred             EEEEEECCCC-CCEEEeec
Confidence            9988865543 34555543

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=99.58  E-value=2.5e-12  Score=114.78  Aligned_cols=237  Identities=9%  Similarity=-0.013  Sum_probs=159.2

Q ss_pred             ceeEEEEecCeEEEEEEEeeCCC-EEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEE
Q psy17610        157 NELLRISVMNMICACIVFTYDGK-AILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRI  235 (515)
Q Consensus       157 ~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i  235 (515)
                      ..+..+...........|+|+++ .+++...++.|..|+. +++. ..+ ..+...+..++++++|+++++...++.|..
T Consensus        35 ~~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~-~~~-~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~  111 (305)
T 3dr2_A           35 ARLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTV-DVL-LDATAFTNGNAVDAQQRLVHCEHGRRAITR  111 (305)
T ss_dssp             CCCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCE-EEE-EESCSCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred             CceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCE-EEE-eCCCCccceeeECCCCCEEEEECCCCEEEE
Confidence            34555555555567889999998 5566667889999998 4543 233 235567899999999997776666678999


Q ss_pred             EEccCCceeeEE-eeccc-cCceEEEEEecCCCEEEE----EeC-------------CCcEEEEEcccceEEEEEEcCcc
Q psy17610        236 WKLTRESQSLQC-VLKEH-TSSVSVIQIKSDSKEAMS----AST-------------DGTCVLWDLIKSTRLIIMILPSM  296 (515)
Q Consensus       236 w~~~~~~~~~~~-~~~~~-~~~v~~~~~~~~~~~l~~----~~~-------------d~~i~iwd~~~~~~~~~~~~~~~  296 (515)
                      |+.+ ....... ...+. ...+..++++++|+..++    +..             .+.|..+|..+++..... ....
T Consensus       112 ~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~  189 (305)
T 3dr2_A          112 SDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDH  189 (305)
T ss_dssp             ECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESS
T ss_pred             ECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCC
Confidence            9975 2222111 11111 234678999999997776    321             246777887666544433 3345


Q ss_pred             EEEEEEcCCCcEEEEEECC------CeEEEEeCCCCceE--EEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccC
Q psy17610        297 IMSAAYHPSEVQLITCSTN------KMIDYWETCDGSII--RSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYRE  368 (515)
Q Consensus       297 ~~~~~~~~~~~~l~~~~~~------~~i~~~d~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~  368 (515)
                      ...++|+|+++.|+++...      +.|..|++..+...  ..+..........++++++|++. ++..+ .|.+|+. .
T Consensus       190 p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lw-v~~~~-gv~~~~~-~  266 (305)
T 3dr2_A          190 PNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLW-SSSGT-GVCVFDS-D  266 (305)
T ss_dssp             EEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEE-ECCSS-EEEEECT-T
T ss_pred             CcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEE-EecCC-cEEEECC-C
Confidence            6789999999988877665      78999998765411  12211122445678999999944 44444 5999998 5


Q ss_pred             CeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCc
Q psy17610        369 GVPCFVGIGHAASITKIKISPDKKVIVSVSADGG  402 (515)
Q Consensus       369 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~  402 (515)
                      ++.+..+..+. .+.+++|+|+++.|..++.++.
T Consensus       267 g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l  299 (305)
T 3dr2_A          267 GQLLGHIPTPG-TASNCTFDQAQQRLFITGGPCL  299 (305)
T ss_dssp             SCEEEEEECSS-CCCEEEECTTSCEEEEEETTEE
T ss_pred             CCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeE
Confidence            66666665544 5899999999988888877643

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=99.58  E-value=3.8e-13  Score=122.12  Aligned_cols=271  Identities=13%  Similarity=0.108  Sum_probs=173.5

Q ss_pred             CCeEEEEEcCCCCEEEEec--CCCcEEEEEccCCceeeEEee-------ccccCceEEEEEecCCCEEEEEeC-----CC
Q psy17610        210 RGVTALAITQDGTRLLSGG--GEGQVRIWKLTRESQSLQCVL-------KEHTSSVSVIQIKSDSKEAMSAST-----DG  275 (515)
Q Consensus       210 ~~v~~~~~~~~~~~l~~~~--~d~~i~iw~~~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~-----d~  275 (515)
                      ..+..++++++|+.+++..  .++.++||.+...  ... .+       ..+...+..++++++++++++-..     ++
T Consensus        17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g--~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~   93 (343)
T 2qe8_A           17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQD--GLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVP   93 (343)
T ss_dssp             SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETT--EEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCC
T ss_pred             CCcceEEECCCCCEEEEeCCCCCCceEEEEECCC--Cee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCC
Confidence            6789999999999888853  2343566666422  221 11       234567899999999876555433     57


Q ss_pred             cEEEEEcccceEEEEEEcC-------ccEEEEEEcCCCcEEEEE-E---CCCeEEEEeCCCCceEEEEecCCCccEEEEE
Q psy17610        276 TCVLWDLIKSTRLIIMILP-------SMIMSAAYHPSEVQLITC-S---TNKMIDYWETCDGSIIRSLEGSDVAAVNCVD  344 (515)
Q Consensus       276 ~i~iwd~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~~-~---~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~  344 (515)
                      .|.+||+.+++.+..+..+       ..+..+++++++..++.+ .   .++.|.+||+.+++..+.+..+.........
T Consensus        94 ~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~  173 (343)
T 2qe8_A           94 KLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDID  173 (343)
T ss_dssp             EEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCC
T ss_pred             eEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccc
Confidence            8999999998877777653       235789999865555444 3   5789999999988876665432111110134


Q ss_pred             EcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCccccee
Q psy17610        345 FVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSK  424 (515)
Q Consensus       345 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~  424 (515)
                      +.++|..+.+...++.+..|.              ..+..++|+|+++.|+.+..++. ++|.+............  ..
T Consensus       174 ~~~~g~~~~~~~~~g~~~~~~--------------~~~~gia~s~dg~~ly~~~~~~~-~l~~~~~~~~~~~~~~~--~~  236 (343)
T 2qe8_A          174 LVIDGVPVQIGQPDGTVIRPH--------------LGVNGIVLDAENEWLYLSPMHST-SMYRIKSADLSNLQLTD--AE  236 (343)
T ss_dssp             CEETTEECBEECTTSCEECCC--------------CCEEEEEECTTSCEEEEEESSCS-EEEEEEHHHHTCTTCCH--HH
T ss_pred             eeECCEEEEeccCCCceecee--------------cccceeEeccCCCEEEEEeCCCC-eEEEEEHHHhcCCCCCh--hh
Confidence            555777777777777765542              23678999999999988877664 45554321100000000  00


Q ss_pred             eecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeec
Q psy17610        425 ISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA  504 (515)
Q Consensus       425 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~  504 (515)
                            ........++......++++++|.++++...++.|.+||.++++............+.+++|.++++++++.+.
T Consensus       237 ------~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~  310 (343)
T 2qe8_A          237 ------LGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQ  310 (343)
T ss_dssp             ------HHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECC
T ss_pred             ------hhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCc
Confidence                  00000011122245678999999999988889999999986676544433322356899999999998888765


Q ss_pred             CC
Q psy17610        505 DQ  506 (515)
Q Consensus       505 dg  506 (515)
                      .+
T Consensus       311 ~~  312 (343)
T 2qe8_A          311 LH  312 (343)
T ss_dssp             GG
T ss_pred             cc
Confidence            44

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=99.58  E-value=1.5e-11  Score=113.50  Aligned_cols=301  Identities=12%  Similarity=0.082  Sum_probs=191.6

Q ss_pred             CCCEEEEEeCCCeEEEEecCCCceEEEecCCC--------CCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEe
Q psy17610        177 DGKAILSGWNDGFIRCFTPQSGKLKFIIPNAH--------NRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCV  248 (515)
Q Consensus       177 ~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~--------~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~  248 (515)
                      .+..+++++.++.|..+|.++|+.+.......        ...+.+.- ..++..+++++.++.|..+|..+++......
T Consensus        52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~  130 (376)
T 3q7m_A           52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGV-TVSGGHVYIGSEKAQVYALNTSDGTVAWQTK  130 (376)
T ss_dssp             ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEE-EEETTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred             ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCc-eEeCCEEEEEcCCCEEEEEECCCCCEEEEEe
Confidence            35678888889999999999999887664321        12232221 2245578888889999999986554433333


Q ss_pred             eccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEE------EEEEcCCCcEEEEEECCCeEEEEe
Q psy17610        249 LKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIM------SAAYHPSEVQLITCSTNKMIDYWE  322 (515)
Q Consensus       249 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~~~~~~~i~~~d  322 (515)
                      ...  ........  .+..++.++.++.+..+|..+++.+.......+..      ....  .+..++++..++.+..+|
T Consensus       131 ~~~--~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~--~~~~v~~g~~~g~l~~~d  204 (376)
T 3q7m_A          131 VAG--EALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT--AFGAAVVGGDNGRVSAVL  204 (376)
T ss_dssp             CSS--CCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEE--ETTEEEECCTTTEEEEEE
T ss_pred             CCC--ceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEE--ECCEEEEEcCCCEEEEEE
Confidence            222  11111122  24578888899999999999999888777654432      1122  245677888899999999


Q ss_pred             CCCCceEEEEecCCCccE---E---EEEEcC--CCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEE
Q psy17610        323 TCDGSIIRSLEGSDVAAV---N---CVDFVD--DGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVI  394 (515)
Q Consensus       323 ~~~~~~~~~~~~~~~~~i---~---~~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l  394 (515)
                      ..+++.+...........   .   .+...|  .+..+++++.++.+..+|..+++.+.....  .....+..  ++..+
T Consensus       205 ~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~~--~~~~l  280 (376)
T 3q7m_A          205 MEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKREL--GSVNDFIV--DGNRI  280 (376)
T ss_dssp             TTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECC--CCEEEEEE--ETTEE
T ss_pred             CCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccC--CCCCCceE--ECCEE
Confidence            999999887764321100   0   011111  245677788899999999999988766542  23344444  45678


Q ss_pred             EEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCe
Q psy17610        395 VSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGS  474 (515)
Q Consensus       395 ~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~  474 (515)
                      +.++.++.+..+|..+++....... .                  ..........  .+..|++++.+|.++.+|..+|+
T Consensus       281 ~~~~~~g~l~~~d~~tG~~~w~~~~-~------------------~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~  339 (376)
T 3q7m_A          281 YLVDQNDRVMALTIDGGVTLWTQSD-L------------------LHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGR  339 (376)
T ss_dssp             EEEETTCCEEEEETTTCCEEEEECT-T------------------TTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCC
T ss_pred             EEEcCCCeEEEEECCCCcEEEeecc-c------------------CCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCc
Confidence            8888899999999877642111000 0                  0000111122  24678888899999999999999


Q ss_pred             eeeeecccccceEEE-EEEcCCCcEEEEeecCCeEEEEE
Q psy17610        475 IIRSLEGSDVAAVNC-VDFVDDGKYFLTGGADQIVKICL  512 (515)
Q Consensus       475 ~~~~~~~~~~~~v~~-~~~s~~~~~l~s~~~dg~v~iw~  512 (515)
                      .+....... ..+.. ...  .+..|+.++.||.|..|+
T Consensus       340 ~~~~~~~~~-~~~~~~~~~--~~~~l~v~~~~G~l~~~~  375 (376)
T 3q7m_A          340 FVAQQKVDS-SGFQTEPVA--ADGKLLIQAKDGTVYSIT  375 (376)
T ss_dssp             EEEEEECCT-TCBCSCCEE--ETTEEEEEBTTSCEEEEE
T ss_pred             EEEEEecCC-CcceeCCEE--ECCEEEEEeCCCEEEEEe
Confidence            887776532 22222 222  244677888999999886

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=99.57  E-value=2.3e-12  Score=114.99  Aligned_cols=235  Identities=10%  Similarity=0.059  Sum_probs=157.9

Q ss_pred             ccccCceEEEEEecCCC-EEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCce
Q psy17610        250 KEHTSSVSVIQIKSDSK-EAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSI  328 (515)
Q Consensus       250 ~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~  328 (515)
                      ...........|+|+++ ++++...++.|..|+. +++..........+..++++++++.+++...++.|..|+.. ++.
T Consensus        41 ~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~  118 (305)
T 3dr2_A           41 YDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTVDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQA  118 (305)
T ss_dssp             ECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCEEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred             ecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCEEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCE
Confidence            33445667899999998 5566667889999998 45443333445578999999999977666666889999985 553


Q ss_pred             EEEEec---CCCccEEEEEEcCCCCEEEE----EcC-------------CCeEEEEEccCCeeeeeccCCCCCeeEEEEC
Q psy17610        329 IRSLEG---SDVAAVNCVDFVDDGKYFLT----GGA-------------DQIVKMWMYREGVPCFVGIGHAASITKIKIS  388 (515)
Q Consensus       329 ~~~~~~---~~~~~i~~~~~~~~~~~l~~----~~~-------------dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~  388 (515)
                      ......   .....+..++++|+|+++++    |..             .+.|..+|..+++.....  .......++|+
T Consensus       119 ~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~s  196 (305)
T 3dr2_A          119 HLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFS  196 (305)
T ss_dssp             EEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEEC
T ss_pred             EEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEc
Confidence            222211   11134667999999998886    432             256777887666544332  34556889999


Q ss_pred             CCCcEEEEEeCC------CcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecC
Q psy17610        389 PDKKVIVSVSAD------GGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTN  462 (515)
Q Consensus       389 ~~~~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d  462 (515)
                      ||++.|+.+...      +.|.+|++....        +..         ..............++++++|++.+ ++.+
T Consensus       197 pdg~~lyv~~~~~~~~~~~~i~~~~~~~~~--------l~~---------~~~~~~~~~~~pdgi~~d~~G~lwv-~~~~  258 (305)
T 3dr2_A          197 PDEQTLYVSQTPEQGHGSVEITAFAWRDGA--------LHD---------RRHFASVPDGLPDGFCVDRGGWLWS-SSGT  258 (305)
T ss_dssp             TTSSEEEEEECCC---CCCEEEEEEEETTE--------EEE---------EEEEECCSSSCCCSEEECTTSCEEE-CCSS
T ss_pred             CCCCEEEEEecCCcCCCCCEEEEEEecCCC--------ccC---------CeEEEECCCCCCCeEEECCCCCEEE-ecCC
Confidence            999988877665      689999875431        000         0000000123355688999999544 4444


Q ss_pred             CeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEEE
Q psy17610        463 KMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKI  510 (515)
Q Consensus       463 g~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~i  510 (515)
                       .|.+|+. +++.+..+..+.  .+.+++|+|+++.|..++.++..++
T Consensus       259 -gv~~~~~-~g~~~~~~~~~~--~~~~~~f~~d~~~L~it~~~~l~~~  302 (305)
T 3dr2_A          259 -GVCVFDS-DGQLLGHIPTPG--TASNCTFDQAQQRLFITGGPCLWML  302 (305)
T ss_dssp             -EEEEECT-TSCEEEEEECSS--CCCEEEECTTSCEEEEEETTEEEEE
T ss_pred             -cEEEECC-CCCEEEEEECCC--ceeEEEEeCCCCEEEEEcCCeEEEE
Confidence             4999997 677777777653  5889999999988888887765444

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=99.56  E-value=6.7e-13  Score=120.49  Aligned_cols=262  Identities=8%  Similarity=0.022  Sum_probs=171.6

Q ss_pred             CcEEEEEEecCCCEEEEEec--CceEEEEECCCCceeEEe------eccCccCeEEEEeCCCCcEEEEEec-----CCcE
Q psy17610         82 SGISSLQYNPVNNKVFVGTV--NCEIFLIDMNSGFTLTLV------NTCHTSAIYDLQFPVNFSSVFATCS-----KNDI  148 (515)
Q Consensus        82 ~~v~~~~~s~~~~~l~~~~~--d~~i~iw~~~~~~~~~~~------~~~h~~~v~~~~~~~~~~~l~~~~~-----d~~i  148 (515)
                      ..+..++++|+|+++++...  ++.+.||.+.++. +...      ..+|...+..++++++++.+++-..     +..|
T Consensus        17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~-~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i   95 (343)
T 2qe8_A           17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDG-LIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL   95 (343)
T ss_dssp             SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTE-EEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred             CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCC-eecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence            68999999999998888642  3424444443443 2211      1235568999999999865554433     5789


Q ss_pred             EEEeCCCCceeEEEEec------CeEEEEEEEeeCCCEEE-EEe---CCCeEEEEecCCCceEEEecCCCCCCeE-EEEE
Q psy17610        149 RIWSVRTLNELLRISVM------NMICACIVFTYDGKAIL-SGW---NDGFIRCFTPQSGKLKFIIPNAHNRGVT-ALAI  217 (515)
Q Consensus       149 ~iw~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~-~~~---~dg~i~~~~~~~~~~~~~~~~~~~~~v~-~~~~  217 (515)
                      .+||+.+++.+..+...      ...+..+++++++..++ +..   .++.|.+||+.+++....+ ..|..... ...+
T Consensus        96 ~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~-~~~~~~~~~~~~~  174 (343)
T 2qe8_A           96 VAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVL-QGYPGIAPEDIDL  174 (343)
T ss_dssp             EEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEEC-TTCTTTSCCSCCC
T ss_pred             EEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEe-cCCCcccccccce
Confidence            99999998877777642      12457889998655554 444   5789999999988876655 33322110 1334


Q ss_pred             cCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCC-cEEEEEcccce----------
Q psy17610        218 TQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDG-TCVLWDLIKST----------  286 (515)
Q Consensus       218 ~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~i~iwd~~~~~----------  286 (515)
                      .++|..+.+.+.++.++.|.                ..+..++++|+++.|+.+..++ .+..++.....          
T Consensus       175 ~~~g~~~~~~~~~g~~~~~~----------------~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (343)
T 2qe8_A          175 VIDGVPVQIGQPDGTVIRPH----------------LGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELG  238 (343)
T ss_dssp             EETTEECBEECTTSCEECCC----------------CCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHH
T ss_pred             eECCEEEEeccCCCceecee----------------cccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhh
Confidence            44666666677777765543                1356799999999888887766 44444432100          


Q ss_pred             -EEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeE
Q psy17610        287 -RLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIV  361 (515)
Q Consensus       287 -~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i  361 (515)
                       .+...........+++++++..+++...++.|.+||..+++............+..+++.++++++++.+..+.+
T Consensus       239 ~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~  314 (343)
T 2qe8_A          239 SKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHS  314 (343)
T ss_dssp             TTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGS
T ss_pred             cceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCccccc
Confidence             011112223456789999999998888899999999856664433333323568899999998888877655443

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=99.56  E-value=1.4e-12  Score=117.41  Aligned_cols=248  Identities=4%  Similarity=-0.071  Sum_probs=168.0

Q ss_pred             EEEEecCCCEEEEEe----------cCceEEEEECCCCceeEEeecc-C-----ccCeEEEEeCCCCcEEEEEec--CCc
Q psy17610         86 SLQYNPVNNKVFVGT----------VNCEIFLIDMNSGFTLTLVNTC-H-----TSAIYDLQFPVNFSSVFATCS--KND  147 (515)
Q Consensus        86 ~~~~s~~~~~l~~~~----------~d~~i~iw~~~~~~~~~~~~~~-h-----~~~v~~~~~~~~~~~l~~~~~--d~~  147 (515)
                      .++++||+++++++.          .++.|.+||..+++....+.-+ .     ......++++|||++++++..  +..
T Consensus        69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~  148 (368)
T 1mda_H           69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAA  148 (368)
T ss_dssp             EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCE
T ss_pred             ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCe
Confidence            799999999999986          3689999999997666555322 0     123568999999999999875  467


Q ss_pred             EEE--EeCCCCceeEEEEecCeEEEEEEEeeCCC-EEEEEeCCCeEEEEecCC-----CceEEE---ecCCCCCCeEEEE
Q psy17610        148 IRI--WSVRTLNELLRISVMNMICACIVFTYDGK-AILSGWNDGFIRCFTPQS-----GKLKFI---IPNAHNRGVTALA  216 (515)
Q Consensus       148 i~i--w~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~~~~~-----~~~~~~---~~~~~~~~v~~~~  216 (515)
                      +.+  +|+.+   +.++.....    ..+.|+++ .+++.+.|+.+.+.++++     ++....   .......+.   .
T Consensus       149 v~V~~iD~~t---v~~i~v~~~----~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~  218 (368)
T 1mda_H          149 AGLSVPGASD---DQLTKSASC----FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q  218 (368)
T ss_dssp             EEEEETTTEE---EEEEECSSC----CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E
T ss_pred             EEEEEEchhh---ceEEECCCc----eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c
Confidence            888  99877   444432211    22345543 445566788888888876     332211   001112233   3


Q ss_pred             EcCCCCEEEEecCCCcEEEEEccCCceeeEEeecc----------ccCceEEEEEecCCCEEEEEeC---------CCcE
Q psy17610        217 ITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKE----------HTSSVSVIQIKSDSKEAMSAST---------DGTC  277 (515)
Q Consensus       217 ~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~l~~~~~---------d~~i  277 (515)
                       .+++..++..+. +.+.+.|...........+.-          .......+.++|++++++.+..         ++.+
T Consensus       219 -~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~  296 (368)
T 1mda_H          219 -ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENT  296 (368)
T ss_dssp             -ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEE
T ss_pred             -cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCE
Confidence             566666666666 899999985433222222211          1112223689999998887543         2356


Q ss_pred             EEEEcccceEEEEEEcCccEEEEEEcCCCcE-EEEEE-CCCeEEEEeCCCCceEEEEecCCCccEEEEEEcC
Q psy17610        278 VLWDLIKSTRLIIMILPSMIMSAAYHPSEVQ-LITCS-TNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVD  347 (515)
Q Consensus       278 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~  347 (515)
                      .++|+.+.+.+..+........++++|++++ +++.. .++.|.++|+.+++.+.++...  .....+++.+
T Consensus       297 ~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg--~~P~~i~~~~  366 (368)
T 1mda_H          297 SSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELD--KGPESLSVQN  366 (368)
T ss_dssp             EEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCC--SCCCEEECCC
T ss_pred             EEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECC--CCCCEEEeec
Confidence            7999999999998888888999999999985 55555 5899999999999999998765  3444566543

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=99.55  E-value=2e-11  Score=109.84  Aligned_cols=222  Identities=12%  Similarity=0.019  Sum_probs=150.0

Q ss_pred             EEEEEeeCCC-EEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEe
Q psy17610        170 ACIVFTYDGK-AILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCV  248 (515)
Q Consensus       170 ~~~~~~~~~~-~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~  248 (515)
                      ....|+|++. .+++...++.|..||..+++... +  .....+.+++++++|+++++. .+ .|.+||...........
T Consensus        52 egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~--~~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~  126 (326)
T 2ghs_A           52 EGPTFDPASGTAWWFNILERELHELHLASGRKTV-H--ALPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAE  126 (326)
T ss_dssp             EEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEE-E--ECSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEEC
T ss_pred             cCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEE-E--ECCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEee
Confidence            4578999755 45555667899999998876543 2  134679999999999877654 44 48999985444322222


Q ss_pred             ecc--ccCceEEEEEecCCCEEEEEeC------CCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEE-CCCeEE
Q psy17610        249 LKE--HTSSVSVIQIKSDSKEAMSAST------DGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCS-TNKMID  319 (515)
Q Consensus       249 ~~~--~~~~v~~~~~~~~~~~l~~~~~------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~i~  319 (515)
                      ...  ....+..+.++|+|+++++...      .+.|..++  +++.............++|+|+++.++.+. .++.|.
T Consensus       127 ~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~  204 (326)
T 2ghs_A          127 LESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLM  204 (326)
T ss_dssp             SSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEE
T ss_pred             CCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEE
Confidence            111  1235789999999987665442      24455555  454433333334567899999998776654 468999


Q ss_pred             EEeCC--CC-ce-----EEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEEC-CC
Q psy17610        320 YWETC--DG-SI-----IRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKIS-PD  390 (515)
Q Consensus       320 ~~d~~--~~-~~-----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~-~~  390 (515)
                      +||..  ++ +.     ...+... ...+..++++++|++.++...++.|..||. +++.+..+..+...+++++|+ |+
T Consensus       205 ~~d~~~~~Gl~~~~~~~~~~~~~~-~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d  282 (326)
T 2ghs_A          205 RVPLDARTGLPTGKAEVFIDSTGI-KGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPD  282 (326)
T ss_dssp             EEEBCTTTCCBSSCCEEEEECTTS-SSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTT
T ss_pred             EEEcccccCCcccCceEEEECCCC-CCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCC
Confidence            99985  55 31     1122112 255678999999998777766789999998 567667766666779999998 88


Q ss_pred             CcEEEEEeCC
Q psy17610        391 KKVIVSVSAD  400 (515)
Q Consensus       391 ~~~l~~~~~d  400 (515)
                      ++.|+.++..
T Consensus       283 ~~~L~vt~~~  292 (326)
T 2ghs_A          283 ASRLLVTSAR  292 (326)
T ss_dssp             SCEEEEEEBC
T ss_pred             CCEEEEEecC
Confidence            8777655543

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=99.54  E-value=2e-12  Score=128.91  Aligned_cols=243  Identities=11%  Similarity=0.112  Sum_probs=163.7

Q ss_pred             cCccCeEEEEeCCCCcEEEEEec-----CCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCC--------
Q psy17610        122 CHTSAIYDLQFPVNFSSVFATCS-----KNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDG--------  188 (515)
Q Consensus       122 ~h~~~v~~~~~~~~~~~l~~~~~-----d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--------  188 (515)
                      +|...+..++|||||++|+.+..     ...|++||+++++.+.. .........++|+ |++.|+.++.+.        
T Consensus       126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~  203 (693)
T 3iuj_A          126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-PLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSA  203 (693)
T ss_dssp             TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEEEEESCCCEEE-TTTEEEEEESSCCC------
T ss_pred             CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccCCceeccEEEe-CCCEEEEEEecCcccccccc
Confidence            35567889999999998886553     24699999999986543 1111123568999 999999888774        


Q ss_pred             -----eEEEEecCCCce--EEEec-CC-CCCCeEEEEEcCCCCEEEEec----CCCcEEEEEccCCceeeEEeeccccCc
Q psy17610        189 -----FIRCFTPQSGKL--KFIIP-NA-HNRGVTALAITQDGTRLLSGG----GEGQVRIWKLTRESQSLQCVLKEHTSS  255 (515)
Q Consensus       189 -----~i~~~~~~~~~~--~~~~~-~~-~~~~v~~~~~~~~~~~l~~~~----~d~~i~iw~~~~~~~~~~~~~~~~~~~  255 (515)
                           .|++|++.++..  ...+. .. |......+.|+|||++|+...    .+..|.++|+........ .+..+...
T Consensus       204 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~-~l~~~~~~  282 (693)
T 3iuj_A          204 RTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLL-TVQGDLDA  282 (693)
T ss_dssp             -CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCE-EEECSSSS
T ss_pred             cCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceE-EEeCCCCc
Confidence                 499999987653  22221 22 445578899999999886443    235899999865433333 33444555


Q ss_pred             eEEEEEecCCCEEEEEeC-C---CcEEEEEcccceE---EEEEEcCccEEEEEEcCCCcEEEEEECCC---eEEEEeCCC
Q psy17610        256 VSVIQIKSDSKEAMSAST-D---GTCVLWDLIKSTR---LIIMILPSMIMSAAYHPSEVQLITCSTNK---MIDYWETCD  325 (515)
Q Consensus       256 v~~~~~~~~~~~l~~~~~-d---~~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~i~~~d~~~  325 (515)
                      .... +++++..|+..+. +   +.|..+|+.++..   .........+.  .++++++.|+....++   .|++|++..
T Consensus       283 ~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g  359 (693)
T 3iuj_A          283 DVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEG  359 (693)
T ss_dssp             CEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTS
T ss_pred             eEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCC
Confidence            5444 6677776665543 2   5799999987643   33333444444  8899998887766543   688999874


Q ss_pred             CceEEEEecCCCccEEEEEEcCCCCEEEEEcCC----CeEEEEEccCCee
Q psy17610        326 GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGAD----QIVKMWMYREGVP  371 (515)
Q Consensus       326 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~  371 (515)
                       .....+..+....+..+.++++++.++....+    +.+..||+.+++.
T Consensus       360 -~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~  408 (693)
T 3iuj_A          360 -KRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI  408 (693)
T ss_dssp             -CEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred             -CeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence             45566655444667788888888877665444    7899999877653

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=99.54  E-value=3.4e-11  Score=108.33  Aligned_cols=223  Identities=12%  Similarity=0.065  Sum_probs=151.0

Q ss_pred             cEEEEEEecCCC-EEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEE
Q psy17610         83 GISSLQYNPVNN-KVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLR  161 (515)
Q Consensus        83 ~v~~~~~s~~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~  161 (515)
                      -....+|+|+++ ++++...++.|..||.++++. ... . ....+.+++|+|+|+.++++ . ..|.+||.++++....
T Consensus        50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~-~-~~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~~~  124 (326)
T 2ghs_A           50 LGEGPTFDPASGTAWWFNILERELHELHLASGRK-TVH-A-LPFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVLTLH  124 (326)
T ss_dssp             BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEE-EEE-E-CSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEEEE
T ss_pred             CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcE-EEE-E-CCCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcEEEE
Confidence            456789999755 555666778999999988643 222 2 34679999999998766554 3 4599999988765332


Q ss_pred             EEe----cCeEEEEEEEeeCCCEEEEEeC------CCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEe-cCC
Q psy17610        162 ISV----MNMICACIVFTYDGKAILSGWN------DGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSG-GGE  230 (515)
Q Consensus       162 ~~~----~~~~v~~~~~~~~~~~l~~~~~------dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d  230 (515)
                      ...    ....+..++++|+|+.+++...      .+.|..++  +++.....  .+......++|+|+++.++.+ +.+
T Consensus       125 ~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~--~~~~~~~~i~~s~dg~~lyv~~~~~  200 (326)
T 2ghs_A          125 AELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLF--ADISIPNSICFSPDGTTGYFVDTKV  200 (326)
T ss_dssp             ECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEE--EEESSEEEEEECTTSCEEEEEETTT
T ss_pred             eeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEee--CCCcccCCeEEcCCCCEEEEEECCC
Confidence            221    1246889999999986665432      24566666  45543322  233456799999999876544 557


Q ss_pred             CcEEEEEcc--CC-ce---eeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCc-cEEEEEEc
Q psy17610        231 GQVRIWKLT--RE-SQ---SLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPS-MIMSAAYH  303 (515)
Q Consensus       231 ~~i~iw~~~--~~-~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~  303 (515)
                      +.|.+|++.  .. ..   .....+.........++++++|.+.++...++.|..||. +++....+..+. .+.+++|.
T Consensus       201 ~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~  279 (326)
T 2ghs_A          201 NRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFI  279 (326)
T ss_dssp             CEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEE
T ss_pred             CEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEe
Confidence            899999985  22 11   112223333455678999999987777767788999998 566666666654 68999998


Q ss_pred             -CCCcEEEEEECC
Q psy17610        304 -PSEVQLITCSTN  315 (515)
Q Consensus       304 -~~~~~l~~~~~~  315 (515)
                       ++++.|++++..
T Consensus       280 g~d~~~L~vt~~~  292 (326)
T 2ghs_A          280 GPDASRLLVTSAR  292 (326)
T ss_dssp             STTSCEEEEEEBC
T ss_pred             cCCCCEEEEEecC
Confidence             888777665543

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=99.54  E-value=1e-12  Score=131.04  Aligned_cols=241  Identities=12%  Similarity=0.062  Sum_probs=160.6

Q ss_pred             CCCcEEEEEEecCCCEEEEEe-----cCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCC--------
Q psy17610         80 DDSGISSLQYNPVNNKVFVGT-----VNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKN--------  146 (515)
Q Consensus        80 ~~~~v~~~~~s~~~~~l~~~~-----~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~--------  146 (515)
                      |...+..++|||||++||.+.     ....|++||+++|+.+.....+  .....++|+ |++.|+.++.+.        
T Consensus       127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~--~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~  203 (693)
T 3iuj_A          127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKD--VKFSGISWL-GNEGFFYSSYDKPDGSELSA  203 (693)
T ss_dssp             SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEE--EESCCCEEE-TTTEEEEEESSCCC------
T ss_pred             CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCC--ceeccEEEe-CCCEEEEEEecCcccccccc
Confidence            456788999999999999643     2357999999998755443321  113578899 999999998874        


Q ss_pred             -----cEEEEeCCCCce--eEEEEe---cCeEEEEEEEeeCCCEEEEEeC----CCeEEEEecCCCc-eEEEecCCCCCC
Q psy17610        147 -----DIRIWSVRTLNE--LLRISV---MNMICACIVFTYDGKAILSGWN----DGFIRCFTPQSGK-LKFIIPNAHNRG  211 (515)
Q Consensus       147 -----~i~iw~~~~~~~--~~~~~~---~~~~v~~~~~~~~~~~l~~~~~----dg~i~~~~~~~~~-~~~~~~~~~~~~  211 (515)
                           .|.+|++.++..  ...+..   +......+.|+|||++|+....    ...|.++|+.++. ....+ ..+...
T Consensus       204 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l-~~~~~~  282 (693)
T 3iuj_A          204 RTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTV-QGDLDA  282 (693)
T ss_dssp             -CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEE-ECSSSS
T ss_pred             cCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEE-eCCCCc
Confidence                 399999987653  222222   2334678899999998875443    2589999998763 22333 244444


Q ss_pred             eEEEEEcCCCCEEEEec-C---CCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCC---cEEEEEccc
Q psy17610        212 VTALAITQDGTRLLSGG-G---EGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDG---TCVLWDLIK  284 (515)
Q Consensus       212 v~~~~~~~~~~~l~~~~-~---d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---~i~iwd~~~  284 (515)
                      .... ++++|..|+..+ .   .+.|..+++..........+..|...+.  .|+++++.|+....++   .|++|++..
T Consensus       283 ~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g  359 (693)
T 3iuj_A          283 DVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEG  359 (693)
T ss_dssp             CEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTS
T ss_pred             eEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCC
Confidence            4444 566666555443 3   3678889986543311223444555554  8899999887766544   688999875


Q ss_pred             ceEEEEEEcC--ccEEEEEEcCCCcEEEEEECC----CeEEEEeCCCCce
Q psy17610        285 STRLIIMILP--SMIMSAAYHPSEVQLITCSTN----KMIDYWETCDGSI  328 (515)
Q Consensus       285 ~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~----~~i~~~d~~~~~~  328 (515)
                      +. ...+..+  ..+..+.+++++..++....+    +.++.||+.+++.
T Consensus       360 ~~-~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~  408 (693)
T 3iuj_A          360 KR-VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI  408 (693)
T ss_dssp             CE-EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred             Ce-eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence            43 4444433  356677778888877766554    7899999987764

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=99.51  E-value=1.3e-12  Score=118.31  Aligned_cols=299  Identities=11%  Similarity=0.064  Sum_probs=193.6

Q ss_pred             EEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecC
Q psy17610         87 LQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMN  166 (515)
Q Consensus        87 ~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~  166 (515)
                      ..+..++. |.+++.++.|..|| .+++.... ...+...+.++...+++ .+.+++.+  +..+|. +++.+..+....
T Consensus        25 ~~~d~~g~-l~v~t~~~~l~~~d-~~g~~~~~-~~~~~~~~~~~~~~~~g-~l~v~t~~--l~~~d~-~g~~~~~~~~~~   97 (330)
T 3hxj_A           25 PILAKNGT-IYLGSSNKNLYAIN-TDGSVKWF-FKSGEIIECRPSIGKDG-TIYFGSDK--VYAINP-DGTEKWRFDTKK   97 (330)
T ss_dssp             CEECTTSC-EECSSTTTTTEEEC-TTSCEEES-SCGGGEEEECCEETTTT-EECCSSCE--EEEECC-CGGGGGGSCC--
T ss_pred             ceEccCCe-EEEEcCCCEEEEEC-CCCcEEEE-EecCCCcccceEEecCC-cEEEecCc--EEEECC-CCcEEEEEECCC
Confidence            44545554 66777788899999 77654333 23344456777777776 45555544  888886 555543333222


Q ss_pred             eEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeE
Q psy17610        167 MICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQ  246 (515)
Q Consensus       167 ~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~  246 (515)
                      .......+.  +..+.+++.++.+..+|.. ++...... .+...+.++...+++. +..++.++.+..+|.. .  ...
T Consensus        98 ~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~-~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g--~~~  169 (330)
T 3hxj_A           98 AIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFK-TKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-G--TEK  169 (330)
T ss_dssp             ---CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEE-CSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-S--CEE
T ss_pred             CcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEc-CCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-C--CEe
Confidence            222223333  5568888889999999998 77766553 3444556667777776 5567778899999985 3  233


Q ss_pred             EeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC-ccEEEEEEcCCCcEEEEEECCCeEEEEeCCC
Q psy17610        247 CVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP-SMIMSAAYHPSEVQLITCSTNKMIDYWETCD  325 (515)
Q Consensus       247 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~  325 (515)
                      .........+.++...+++... .++  +.+..+| .+++........ ..+.++...+++. +.+++.++.+..+| .+
T Consensus       170 ~~~~~~~~~~~~~~~d~~g~l~-v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~-~~  243 (330)
T 3hxj_A          170 WRFKTNDAITSAASIGKDGTIY-FGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAIN-PD  243 (330)
T ss_dssp             EEEECSSCCCSCCEECTTCCEE-EES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEEC-TT
T ss_pred             EEEecCCCceeeeEEcCCCEEE-EEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEEC-CC
Confidence            3333344556667776777644 444  7899999 677666555543 3466777777765 55566778888887 46


Q ss_pred             CceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEE
Q psy17610        326 GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFL  405 (515)
Q Consensus       326 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i  405 (515)
                      ++.+..+.... ..+..+.+.+++. |.+++.+|.+..+|. +++....+......+.++...++++ |..++.+|.+++
T Consensus       244 g~~~~~~~~~~-~~~~~~~~~~~g~-l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~-l~~gt~~G~~~~  319 (330)
T 3hxj_A          244 GTEKWRFKTGK-RIESSPVIGNTDT-IYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGT-IYFGTRNGKFYA  319 (330)
T ss_dssp             SCEEEEEECSS-CCCSCCEECTTSC-EEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCC-EEEECTTSCEEE
T ss_pred             CCEeEEeeCCC-CccccceEcCCCe-EEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCE-EEEEcCCCeEEE
Confidence            66666666543 3344455665664 667778888999996 6776666655566778888888886 556889999998


Q ss_pred             EeCCC
Q psy17610        406 WTFPE  410 (515)
Q Consensus       406 w~~~~  410 (515)
                      ...+.
T Consensus       320 ~~~~~  324 (330)
T 3hxj_A          320 LFNLE  324 (330)
T ss_dssp             EEC--
T ss_pred             Eeccc
Confidence            87654

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.49  E-value=1.7e-12  Score=117.00  Aligned_cols=171  Identities=9%  Similarity=0.046  Sum_probs=132.3

Q ss_pred             CeEEEEeCCCCcEEEEEecCCcEEEEeCCCCc-----------eeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEe
Q psy17610        126 AIYDLQFPVNFSSVFATCSKNDIRIWSVRTLN-----------ELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFT  194 (515)
Q Consensus       126 ~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~-----------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~  194 (515)
                      ++..+++++....+++++.+ .+++|++++.+           ..... .... |+.++|  ++++|+++ .++.|++||
T Consensus        39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d  112 (388)
T 1xip_A           39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALYSLD  112 (388)
T ss_dssp             CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred             cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence            68999999998888888876 56669876443           22233 3555 999999  89999998 889999999


Q ss_pred             cCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCC
Q psy17610        195 PQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTD  274 (515)
Q Consensus       195 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  274 (515)
                      +.+....... ..|..++.++.+.+.  .+++++.||.+.+||+.....  ..    +...|++++|+|+|  ++.+..|
T Consensus       113 v~sl~~~~~~-~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~--~~----~~~~Vs~v~WSpkG--~~vg~~d  181 (388)
T 1xip_A          113 LEELSEFRTV-TSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKST--KQ----LAQNVTSFDVTNSQ--LAVLLKD  181 (388)
T ss_dssp             SSSTTCEEEE-EECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCE--EE----EEESEEEEEECSSE--EEEEETT
T ss_pred             chhhhccCcc-ceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcc--cc----ccCCceEEEEcCCc--eEEEEcC
Confidence            9877655444 467778888887765  388889999999999964432  21    45689999999999  6789999


Q ss_pred             CcEEEEEcccceE--EEEE------E----cCccEEEEEEcCCCcEEEEEE
Q psy17610        275 GTCVLWDLIKSTR--LIIM------I----LPSMIMSAAYHPSEVQLITCS  313 (515)
Q Consensus       275 ~~i~iwd~~~~~~--~~~~------~----~~~~~~~~~~~~~~~~l~~~~  313 (515)
                      |++++|+....+.  ...+      .    +...+.++.|.+++.++++-.
T Consensus       182 g~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~  232 (388)
T 1xip_A          182 RSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG  232 (388)
T ss_dssp             SCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred             CcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence            9999999887775  4555      1    345799999999988887643

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=99.47  E-value=2.2e-10  Score=103.38  Aligned_cols=223  Identities=9%  Similarity=0.032  Sum_probs=151.9

Q ss_pred             EeC--CCCcEEEEEec-CCcEEEEeCCCC----ceeEEEE------e-cCeEEEEEEEeeCCCEEEEEeCC------CeE
Q psy17610        131 QFP--VNFSSVFATCS-KNDIRIWSVRTL----NELLRIS------V-MNMICACIVFTYDGKAILSGWND------GFI  190 (515)
Q Consensus       131 ~~~--~~~~~l~~~~~-d~~i~iw~~~~~----~~~~~~~------~-~~~~v~~~~~~~~~~~l~~~~~d------g~i  190 (515)
                      .++  ++.++|++.+. +++|.++|+.+.    +..+.+.      . ....-..+..+|+| .++++..+      |.|
T Consensus        88 ~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v  166 (462)
T 2ece_A           88 NGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGI  166 (462)
T ss_dssp             TCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEE
T ss_pred             ccCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeE
Confidence            346  88888888877 788999999754    4444442      0 11244667888999 66665555      789


Q ss_pred             EEEecCCCceEEEecCCCCC--CeEEEEEcCCCCEEEEec-------------------CCCcEEEEEccCCceeeEEee
Q psy17610        191 RCFTPQSGKLKFIIPNAHNR--GVTALAITQDGTRLLSGG-------------------GEGQVRIWKLTRESQSLQCVL  249 (515)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~-------------------~d~~i~iw~~~~~~~~~~~~~  249 (515)
                      .++|.++++.+.....+...  --..+.|+|+++.+++..                   ...+|.+||+...  +....+
T Consensus       167 ~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~--k~~~tI  244 (462)
T 2ece_A          167 LMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR--KRIHSL  244 (462)
T ss_dssp             EEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT--EEEEEE
T ss_pred             EEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCC--cEeeEE
Confidence            99999999999888533221  233578899999888874                   3689999999643  344444


Q ss_pred             ccc--cCceEEEEE--ecCCCEEEEEeC------CCcEEEEEcccceE--EEEEEc-------------------CccEE
Q psy17610        250 KEH--TSSVSVIQI--KSDSKEAMSAST------DGTCVLWDLIKSTR--LIIMIL-------------------PSMIM  298 (515)
Q Consensus       250 ~~~--~~~v~~~~~--~~~~~~l~~~~~------d~~i~iwd~~~~~~--~~~~~~-------------------~~~~~  298 (515)
                      ...  ......+.|  +|++++++.+++      +++|.+|....++-  .+.+..                   .....
T Consensus       245 ~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa  324 (462)
T 2ece_A          245 TLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVT  324 (462)
T ss_dssp             ESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCC
T ss_pred             ecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCcee
Confidence            321  123345555  999999887774      56887776654321  111100                   23467


Q ss_pred             EEEEcCCCcEEEEEEC-CCeEEEEeCCC---CceEEEEecCCC-------------ccEEEEEEcCCCCEEEEEc
Q psy17610        299 SAAYHPSEVQLITCST-NKMIDYWETCD---GSIIRSLEGSDV-------------AAVNCVDFVDDGKYFLTGG  356 (515)
Q Consensus       299 ~~~~~~~~~~l~~~~~-~~~i~~~d~~~---~~~~~~~~~~~~-------------~~i~~~~~~~~~~~l~~~~  356 (515)
                      .+.+++|+++|+++.. .+.|.+||+..   .+.+..+.....             .....++++|||++|+++.
T Consensus       325 ~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN  399 (462)
T 2ece_A          325 DIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN  399 (462)
T ss_dssp             CEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred             EEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence            8899999999988776 68999999853   355555554310             1357899999999999887

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=99.46  E-value=1.2e-12  Score=118.54  Aligned_cols=296  Identities=15%  Similarity=0.128  Sum_probs=189.0

Q ss_pred             EEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeecc
Q psy17610        172 IVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKE  251 (515)
Q Consensus       172 ~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~  251 (515)
                      .....++ .+.+++.++.|..|| .+++..... ......+.++...+++. +..++.+  +..+|.. ..  .......
T Consensus        25 ~~~d~~g-~l~v~t~~~~l~~~d-~~g~~~~~~-~~~~~~~~~~~~~~~g~-l~v~t~~--l~~~d~~-g~--~~~~~~~   95 (330)
T 3hxj_A           25 PILAKNG-TIYLGSSNKNLYAIN-TDGSVKWFF-KSGEIIECRPSIGKDGT-IYFGSDK--VYAINPD-GT--EKWRFDT   95 (330)
T ss_dssp             CEECTTS-CEECSSTTTTTEEEC-TTSCEEESS-CGGGEEEECCEETTTTE-ECCSSCE--EEEECCC-GG--GGGGSCC
T ss_pred             ceEccCC-eEEEEcCCCEEEEEC-CCCcEEEEE-ecCCCcccceEEecCCc-EEEecCc--EEEECCC-Cc--EEEEEEC
Confidence            3344455 466777788899999 888876654 23344456777776664 5556555  7777752 21  1111111


Q ss_pred             ccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCc-cEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEE
Q psy17610        252 HTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPS-MIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIR  330 (515)
Q Consensus       252 ~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~  330 (515)
                      .........+.  +..++.++.++.+..+|.. ++.......+. .+.++...+++. +.+++.++.+..+|.. ++...
T Consensus        96 ~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~  170 (330)
T 3hxj_A           96 KKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKW  170 (330)
T ss_dssp             -----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEE
T ss_pred             CCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeE
Confidence            12222223333  5667888888999999988 76666555443 345556666666 5567778999999998 88777


Q ss_pred             EEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCC
Q psy17610        331 SLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPE  410 (515)
Q Consensus       331 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~  410 (515)
                      .+.... ..+.++...+++.+.+ ++  +.+..+| .+++...........+.++...+++. |..++.++.+..++...
T Consensus       171 ~~~~~~-~~~~~~~~d~~g~l~v-~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~~g  244 (330)
T 3hxj_A          171 RFKTND-AITSAASIGKDGTIYF-GS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINPDG  244 (330)
T ss_dssp             EEECSS-CCCSCCEECTTCCEEE-ES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECTTS
T ss_pred             EEecCC-CceeeeEEcCCCEEEE-Ee--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECCCC
Confidence            776544 5566777877887554 44  7789999 67777766666667788899988876 45566778888886422


Q ss_pred             CcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEE
Q psy17610        411 LEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCV  490 (515)
Q Consensus       411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~  490 (515)
                      ...        . ...            .....+..+...+++ .|..++.+|.|..+|. +++.+..+.... ..+.++
T Consensus       245 ~~~--------~-~~~------------~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~~~~~~~~~~-~~~~~~  300 (330)
T 3hxj_A          245 TEK--------W-RFK------------TGKRIESSPVIGNTD-TIYFGSYDGHLYAINP-DGTEKWNFETGS-WIIATP  300 (330)
T ss_dssp             CEE--------E-EEE------------CSSCCCSCCEECTTS-CEEEECTTCEEEEECT-TSCEEEEEECSS-CCCSCC
T ss_pred             CEe--------E-Eee------------CCCCccccceEcCCC-eEEEecCCCCEEEECC-CCcEEEEEEcCC-ccccce
Confidence            110        0 000            001112234445455 5666777888999995 777776665443 567778


Q ss_pred             EEcCCCcEEEEeecCCeEEEEE
Q psy17610        491 DFVDDGKYFLTGGADQIVKICL  512 (515)
Q Consensus       491 ~~s~~~~~l~s~~~dg~v~iw~  512 (515)
                      ...++|+ |..++.+|.+++..
T Consensus       301 ~~d~~g~-l~~gt~~G~~~~~~  321 (330)
T 3hxj_A          301 VIDENGT-IYFGTRNGKFYALF  321 (330)
T ss_dssp             EECTTCC-EEEECTTSCEEEEE
T ss_pred             EEcCCCE-EEEEcCCCeEEEEe
Confidence            8888887 45588899888754

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=99.44  E-value=8.6e-12  Score=116.63  Aligned_cols=253  Identities=8%  Similarity=-0.019  Sum_probs=179.2

Q ss_pred             CCCcEEEEEec-CCcEEEEeCCCCceeEEEEecC-eEEEEEEE-e-eCCCEEEEEe------------------CCCeEE
Q psy17610        134 VNFSSVFATCS-KNDIRIWSVRTLNELLRISVMN-MICACIVF-T-YDGKAILSGW------------------NDGFIR  191 (515)
Q Consensus       134 ~~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~~-~~v~~~~~-~-~~~~~l~~~~------------------~dg~i~  191 (515)
                      +||+++++... ++.|.+.|+++.+....+.... .....+++ + |+++++++++                  .++.+.
T Consensus        99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt  178 (595)
T 1fwx_A           99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT  178 (595)
T ss_dssp             EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred             cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence            38888888777 5679999999999888665332 34677887 5 9999999885                  245799


Q ss_pred             EEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCC---------------cEEEEEccCCceeeEEeeccccCce
Q psy17610        192 CFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEG---------------QVRIWKLTRESQSLQCVLKEHTSSV  256 (515)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---------------~i~iw~~~~~~~~~~~~~~~~~~~v  256 (515)
                      ++|.++.+...++..+-  ....++++|+|+++++.+.+.               .+.+.|.....              
T Consensus       179 vID~~t~~v~~qI~Vgg--~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~--------------  242 (595)
T 1fwx_A          179 AVDADKWEVAWQVLVSG--NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIE--------------  242 (595)
T ss_dssp             EEETTTTEEEEEEEESS--CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHH--------------
T ss_pred             EEECCCCeEEEEEEeCC--CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeecccee--------------
Confidence            99999999888875432  346778999999999888653               23444431100              


Q ss_pred             EEEEEecCCCEEEEEeCCCcEEEEEccc--ceE-EEEEEcCccEEEEEEcCCCcEEEEEEC-CCeEEEEeCCCCc-----
Q psy17610        257 SVIQIKSDSKEAMSASTDGTCVLWDLIK--STR-LIIMILPSMIMSAAYHPSEVQLITCST-NKMIDYWETCDGS-----  327 (515)
Q Consensus       257 ~~~~~~~~~~~l~~~~~d~~i~iwd~~~--~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~i~~~d~~~~~-----  327 (515)
                         .+.++|+....    +.|.+.|.++  ++. +..+..+....++.++|||+++++++. +.++.++|+.+.+     
T Consensus       243 ---~~v~~Gk~~~i----~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~  315 (595)
T 1fwx_A          243 ---KAIAAGDYQEL----NGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYE  315 (595)
T ss_dssp             ---HHHHHTCSEEE----TTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHS
T ss_pred             ---EeccCCCeeEE----CcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECccccccccc
Confidence               02234544333    5699999998  555 667777778889999999999887764 7899999998653     


Q ss_pred             -------eEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccC----------CeeeeeccCCCCCe-----eEE
Q psy17610        328 -------IIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYRE----------GVPCFVGIGHAASI-----TKI  385 (515)
Q Consensus       328 -------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~----------~~~~~~~~~~~~~i-----~~~  385 (515)
                             ...++...  .....++|+|+|...++...|++|.+||+..          .+.+..+..|-.+-     ..+
T Consensus       316 ~l~~~~~v~~~v~vG--~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~  393 (595)
T 1fwx_A          316 NADPRSAVVAEPELG--LGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGE  393 (595)
T ss_dssp             CCCGGGGEEECCBCC--SCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTT
T ss_pred             ccCcccceEEEcCCC--CCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccce
Confidence                   33444333  5678999999995556677899999999977          44555555543321     223


Q ss_pred             EECCCCcEEEEEeCC--CcE-----------EEEeCCCC
Q psy17610        386 KISPDKKVIVSVSAD--GGI-----------FLWTFPEL  411 (515)
Q Consensus       386 ~~~~~~~~l~~~~~d--g~i-----------~iw~~~~~  411 (515)
                      .++|||++|++...-  .++           .++|+...
T Consensus       394 t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~  432 (595)
T 1fwx_A          394 TLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGD  432 (595)
T ss_dssp             STTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSS
T ss_pred             EeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCCC
Confidence            558999999988642  233           78888543

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=99.43  E-value=1.7e-09  Score=94.24  Aligned_cols=252  Identities=7%  Similarity=-0.048  Sum_probs=161.0

Q ss_pred             CCEEEEEecCceEEEEECCCCcee----EEeeccCccCeEEEEeCCCCcEEEEEec-CCcEEEEeCCCCceeEEEEecCe
Q psy17610         93 NNKVFVGTVNCEIFLIDMNSGFTL----TLVNTCHTSAIYDLQFPVNFSSVFATCS-KNDIRIWSVRTLNELLRISVMNM  167 (515)
Q Consensus        93 ~~~l~~~~~d~~i~iw~~~~~~~~----~~~~~~h~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~~~  167 (515)
                      |++|+.+.. +.|+.++++.....    ...+......+..++|++++..|+.+.. .+.|..++.........+.....
T Consensus         1 ~~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~   79 (267)
T 1npe_A            1 GTHLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLG   79 (267)
T ss_dssp             CEEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCC
T ss_pred             CcEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCC
Confidence            345666654 47999998764211    1122212345789999997777777665 78899999876543332222224


Q ss_pred             EEEEEEEeeCCCEEEEE-eCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecC---CCcEEEEEccCCce
Q psy17610        168 ICACIVFTYDGKAILSG-WNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGG---EGQVRIWKLTRESQ  243 (515)
Q Consensus       168 ~v~~~~~~~~~~~l~~~-~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~iw~~~~~~~  243 (515)
                      ....+++++++..|+.+ ...+.|.+++++........ .........++++|++..|..+..   .+.|..++++....
T Consensus        80 ~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~-~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~  158 (267)
T 1npe_A           80 SPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLF-DTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR  158 (267)
T ss_dssp             CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-CSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC
T ss_pred             CccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEE-ECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc
Confidence            56889999976666655 45678999998754433333 222346789999997666555443   36888888753322


Q ss_pred             eeEEeeccccCceEEEEEecCCCEEEEEe-CCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEE-CCCeEEEE
Q psy17610        244 SLQCVLKEHTSSVSVIQIKSDSKEAMSAS-TDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCS-TNKMIDYW  321 (515)
Q Consensus       244 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~i~~~  321 (515)
                      ...  ..........+++++++..|+.+. ..+.|..+|+.................++..  +..++.+. .++.|..+
T Consensus       159 ~~~--~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d--~~~lyva~~~~~~v~~~  234 (267)
T 1npe_A          159 RIL--AQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSY--GKNLYYTDWKTNSVIAM  234 (267)
T ss_dssp             EEE--ECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEEE--TTEEEEEETTTTEEEEE
T ss_pred             EEE--EECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCCCceEEEEe--CCEEEEEECCCCeEEEE
Confidence            211  112234578899999877665554 4578999999765544444433445566654  44555444 56899999


Q ss_pred             eCCCCceEEEEecCCCccEEEEEEcCCCC
Q psy17610        322 ETCDGSIIRSLEGSDVAAVNCVDFVDDGK  350 (515)
Q Consensus       322 d~~~~~~~~~~~~~~~~~i~~~~~~~~~~  350 (515)
                      |..+++.+..+..........+++.|++.
T Consensus       235 d~~~g~~~~~i~~g~~~~p~gi~~~~~~~  263 (267)
T 1npe_A          235 DLAISKEMDTFHPHKQTRLYGITIALSQC  263 (267)
T ss_dssp             ETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred             eCCCCCceEEEccccccccceeeecCccC
Confidence            99999998888754323466778887754

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=99.41  E-value=4.7e-10  Score=101.26  Aligned_cols=225  Identities=11%  Similarity=0.032  Sum_probs=154.6

Q ss_pred             EEe--cCCCEEEEEe-cCceEEEEECCCC-c--eeEEeec-------cCccCeEEEEeCCCCcEEEEEecC------CcE
Q psy17610         88 QYN--PVNNKVFVGT-VNCEIFLIDMNSG-F--TLTLVNT-------CHTSAIYDLQFPVNFSSVFATCSK------NDI  148 (515)
Q Consensus        88 ~~s--~~~~~l~~~~-~d~~i~iw~~~~~-~--~~~~~~~-------~h~~~v~~~~~~~~~~~l~~~~~d------~~i  148 (515)
                      +++  +++++|++.+ .+++|.++|+.+. .  ++..+..       .....-..+..+|+| .++++..+      +.+
T Consensus        88 ~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v  166 (462)
T 2ece_A           88 NGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGI  166 (462)
T ss_dssp             TCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEE
T ss_pred             ccCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeE
Confidence            336  7888887754 5689999999753 1  2333331       011234567888999 66655555      789


Q ss_pred             EEEeCCCCceeEEEEecCe---EEEEEEEeeCCCEEEEEe-------------------CCCeEEEEecCCCceEEEecC
Q psy17610        149 RIWSVRTLNELLRISVMNM---ICACIVFTYDGKAILSGW-------------------NDGFIRCFTPQSGKLKFIIPN  206 (515)
Q Consensus       149 ~iw~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~-------------------~dg~i~~~~~~~~~~~~~~~~  206 (515)
                      .+.|.++++.+.++.....   --..+.|+|+++.+++..                   ...+|.+||+.+++...++..
T Consensus       167 ~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~v  246 (462)
T 2ece_A          167 LMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTL  246 (462)
T ss_dssp             EEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEES
T ss_pred             EEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEec
Confidence            9999999999888863322   124578899999888874                   368999999999988887754


Q ss_pred             C-CCCCeEEEEE--cCCCCEEEEecC------CCcEEEEEccCCceeeEEee--ccc----------------cCceEEE
Q psy17610        207 A-HNRGVTALAI--TQDGTRLLSGGG------EGQVRIWKLTRESQSLQCVL--KEH----------------TSSVSVI  259 (515)
Q Consensus       207 ~-~~~~v~~~~~--~~~~~~l~~~~~------d~~i~iw~~~~~~~~~~~~~--~~~----------------~~~v~~~  259 (515)
                      + .......+.|  +|+++++.++++      +++|.+|..+.+.......+  ...                ......+
T Consensus       247 g~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I  326 (462)
T 2ece_A          247 GEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDI  326 (462)
T ss_dssp             CTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCE
T ss_pred             CCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEE
Confidence            3 2234456666  999998887764      56888877654332222221  110                2346789


Q ss_pred             EEecCCCEEEEEeC-CCcEEEEEccc---ceEEEEEEcCc---------------cEEEEEEcCCCcEEEEEE
Q psy17610        260 QIKSDSKEAMSAST-DGTCVLWDLIK---STRLIIMILPS---------------MIMSAAYHPSEVQLITCS  313 (515)
Q Consensus       260 ~~~~~~~~l~~~~~-d~~i~iwd~~~---~~~~~~~~~~~---------------~~~~~~~~~~~~~l~~~~  313 (515)
                      .+++|+++|+++.. .+.|.++|+..   .+.+..+...+               ....++++|+|++|+++.
T Consensus       327 ~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN  399 (462)
T 2ece_A          327 DISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN  399 (462)
T ss_dssp             EECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred             EECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence            99999999987776 67999999852   35555554431               368899999999999886

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=99.40  E-value=6.6e-10  Score=109.67  Aligned_cols=301  Identities=11%  Similarity=0.143  Sum_probs=194.2

Q ss_pred             CCEEEEEecCceEEEEECCCCceeEEeeccCcc---------Ce-EEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEE
Q psy17610         93 NNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTS---------AI-YDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRI  162 (515)
Q Consensus        93 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~---------~v-~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~  162 (515)
                      +..|++++.++.|+-+|..+|+.+-........         .+ ..+++  .+..+++++.|+.|..+|.++|+.+.++
T Consensus        66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~  143 (668)
T 1kv9_A           66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQ  143 (668)
T ss_dssp             TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeeee
Confidence            667888888999999999998776654321110         00 11222  2457888888999999999999999887


Q ss_pred             EecC----eEEEEEEEeeCCCEEEEEeC------CCeEEEEecCCCceEEEecCCC--C---------------------
Q psy17610        163 SVMN----MICACIVFTYDGKAILSGWN------DGFIRCFTPQSGKLKFIIPNAH--N---------------------  209 (515)
Q Consensus       163 ~~~~----~~v~~~~~~~~~~~l~~~~~------dg~i~~~~~~~~~~~~~~~~~~--~---------------------  209 (515)
                      ....    ..+.+.-.-.+ ..++++..      +|.|..+|.++|+.+..+....  .                     
T Consensus       144 ~~~~~~~~~~~~~~P~v~~-~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~  222 (668)
T 1kv9_A          144 QTTDPAKPYSITGAPRVVK-GKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQY  222 (668)
T ss_dssp             ECSCTTSSCBCCSCCEEET-TEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCH
T ss_pred             ccCCCCCcceecCCCEEEC-CEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccce
Confidence            7531    11111001113 35555543      5899999999999988764211  0                     


Q ss_pred             -------CCeEEEEEcCCCCEEEEecCCCc-------------------EEEEEccCCceeeEEeecccc-------Cce
Q psy17610        210 -------RGVTALAITQDGTRLLSGGGEGQ-------------------VRIWKLTRESQSLQCVLKEHT-------SSV  256 (515)
Q Consensus       210 -------~~v~~~~~~~~~~~l~~~~~d~~-------------------i~iw~~~~~~~~~~~~~~~~~-------~~v  256 (515)
                             .....+++.++...++.++.++.                   |..+|.++.+.........|.       .+.
T Consensus       223 w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~  302 (668)
T 1kv9_A          223 WKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQI  302 (668)
T ss_dssp             HHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCE
T ss_pred             eeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCc
Confidence                   01124688888888888877663                   888888655544443333232       233


Q ss_pred             EEEEEecCCC---EEEEEeCCCcEEEEEcccceEEEEEEcCc-------------cE-----------------------
Q psy17610        257 SVIQIKSDSK---EAMSASTDGTCVLWDLIKSTRLIIMILPS-------------MI-----------------------  297 (515)
Q Consensus       257 ~~~~~~~~~~---~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-------------~~-----------------------  297 (515)
                      ....+..+++   .++.++.+|.++++|..+++.+.......             ++                       
T Consensus       303 ~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~  382 (668)
T 1kv9_A          303 TLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHN  382 (668)
T ss_dssp             EEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSC
T ss_pred             EEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccC
Confidence            3333344665   68889999999999999998875443221             00                       


Q ss_pred             -EEEEEcCCCcEEEEEE------------------------------------CCCeEEEEeCCCCceEEEEecCCCccE
Q psy17610        298 -MSAAYHPSEVQLITCS------------------------------------TNKMIDYWETCDGSIIRSLEGSDVAAV  340 (515)
Q Consensus       298 -~~~~~~~~~~~l~~~~------------------------------------~~~~i~~~d~~~~~~~~~~~~~~~~~i  340 (515)
                       ..++++|+...+++..                                    .++.|..||+.+++.+.+.....  +.
T Consensus       383 w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~--~~  460 (668)
T 1kv9_A          383 WHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPT--HW  460 (668)
T ss_dssp             SSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESS--SC
T ss_pred             CCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCC--CC
Confidence             1257777766665421                                    23789999999999988877543  22


Q ss_pred             EEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCe-eEEEECCCCc-EEEEEe
Q psy17610        341 NCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASI-TKIKISPDKK-VIVSVS  398 (515)
Q Consensus       341 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i-~~~~~~~~~~-~l~~~~  398 (515)
                      ....+...+.++++++.||.++.||.++++.+..+....... .-+.+..+|+ +++.++
T Consensus       461 ~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~G~~yva~~~  520 (668)
T 1kv9_A          461 NGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQYVAIMA  520 (668)
T ss_dssp             CCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred             cCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEECCEEEEEEEe
Confidence            333444567789999999999999999999988776543211 2234445666 444444

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=99.40  E-value=1e-10  Score=115.40  Aligned_cols=259  Identities=14%  Similarity=0.191  Sum_probs=169.8

Q ss_pred             CCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCC--CCcEEEEEec------CCcEEEEeCCCCceeEEEEe
Q psy17610         93 NNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPV--NFSSVFATCS------KNDIRIWSVRTLNELLRISV  164 (515)
Q Consensus        93 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~~~~~------d~~i~iw~~~~~~~~~~~~~  164 (515)
                      +..+++++.|+.|..+|.++|+.+-............+..+|  .+..+++++.      ++.|..+|.++|+.+.++..
T Consensus       117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~  196 (668)
T 1kv9_A          117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT  196 (668)
T ss_dssp             BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred             CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecc
Confidence            567888889999999999998777655432111111111122  1235666554      48899999999999988863


Q ss_pred             cC-------------------------------eEEEEEEEeeCCCEEEEEeCCC-------------------eEEEEe
Q psy17610        165 MN-------------------------------MICACIVFTYDGKAILSGWNDG-------------------FIRCFT  194 (515)
Q Consensus       165 ~~-------------------------------~~v~~~~~~~~~~~l~~~~~dg-------------------~i~~~~  194 (515)
                      ..                               .....+++.|+...++.+..++                   .|..+|
T Consensus       197 ~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD  276 (668)
T 1kv9_A          197 VPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIR  276 (668)
T ss_dssp             SCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEEC
T ss_pred             cCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEc
Confidence            11                               0112467888888888887766                   499999


Q ss_pred             cCCCceEEEecCC-CC-------CCeEEEEEcCCCC---EEEEecCCCcEEEEEccCCceeeEEeecc---------cc-
Q psy17610        195 PQSGKLKFIIPNA-HN-------RGVTALAITQDGT---RLLSGGGEGQVRIWKLTRESQSLQCVLKE---------HT-  253 (515)
Q Consensus       195 ~~~~~~~~~~~~~-~~-------~~v~~~~~~~~~~---~l~~~~~d~~i~iw~~~~~~~~~~~~~~~---------~~-  253 (515)
                      .++|+.+..+... |.       .+.....+..+|+   .++.++.+|.+.++|..+.+......+..         .. 
T Consensus       277 ~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g  356 (668)
T 1kv9_A          277 PDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATG  356 (668)
T ss_dssp             TTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTC
T ss_pred             CCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccC
Confidence            9999998877543 22       2333333334564   68889999999999986543321111000         00 


Q ss_pred             Cc------------------------eEEEEEecCCCEEEEEe------------------------------------C
Q psy17610        254 SS------------------------VSVIQIKSDSKEAMSAS------------------------------------T  273 (515)
Q Consensus       254 ~~------------------------v~~~~~~~~~~~l~~~~------------------------------------~  273 (515)
                      .+                        -..++++|+...++...                                    .
T Consensus       357 ~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~  436 (668)
T 1kv9_A          357 RPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVV  436 (668)
T ss_dssp             CEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGC
T ss_pred             CccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCc
Confidence            00                        01257777766655421                                    2


Q ss_pred             CCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCE
Q psy17610        274 DGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKY  351 (515)
Q Consensus       274 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  351 (515)
                      +|.|..||+.+++.+.......+.....+...+.++++++.++.++.||.++++.+..+.........-+.+..+|+.
T Consensus       437 ~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~G~~  514 (668)
T 1kv9_A          437 SGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQ  514 (668)
T ss_dssp             EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred             cceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEECCEE
Confidence            378999999999998888776655555556678889999999999999999999999988653222223444456663

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=99.38  E-value=9.1e-10  Score=103.15  Aligned_cols=233  Identities=12%  Similarity=0.041  Sum_probs=161.4

Q ss_pred             cCCCEEEEEec-CceEEEEECCCCceeEEeeccCccCeEEEEe-C-CCCcEEEEEe------------------cCCcEE
Q psy17610         91 PVNNKVFVGTV-NCEIFLIDMNSGFTLTLVNTCHTSAIYDLQF-P-VNFSSVFATC------------------SKNDIR  149 (515)
Q Consensus        91 ~~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~-~-~~~~~l~~~~------------------~d~~i~  149 (515)
                      +||++|.+... ++.|.+.|+++.+....+.-........+++ + |+++++++++                  .++.+.
T Consensus        99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt  178 (595)
T 1fwx_A           99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT  178 (595)
T ss_dssp             EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred             cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence            38899888765 4679999999954444222223345788887 5 9999999985                  246799


Q ss_pred             EEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCC--------------------------------------eEE
Q psy17610        150 IWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDG--------------------------------------FIR  191 (515)
Q Consensus       150 iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--------------------------------------~i~  191 (515)
                      +.|.++.+...++.... ....++++|+|+++++.+.+.                                      .|.
T Consensus       179 vID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~  257 (595)
T 1fwx_A          179 AVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVK  257 (595)
T ss_dssp             EEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEE
T ss_pred             EEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEE
Confidence            99999999888887644 346678999999999887543                                      366


Q ss_pred             EEecCC--Cce-EEEecCCCCCCeEEEEEcCCCCEEEEec-CCCcEEEEEccCCc----------eeeEEeeccccCceE
Q psy17610        192 CFTPQS--GKL-KFIIPNAHNRGVTALAITQDGTRLLSGG-GEGQVRIWKLTRES----------QSLQCVLKEHTSSVS  257 (515)
Q Consensus       192 ~~~~~~--~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iw~~~~~~----------~~~~~~~~~~~~~v~  257 (515)
                      +.|..+  ++. +..++.  .....++.++|||+++++++ .+.+|.++|+.+..          ........ -.....
T Consensus       258 VID~~~~~~~~~~~~Ipv--g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~  334 (595)
T 1fwx_A          258 VVDGRKEASSLFTRYIPI--ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPL  334 (595)
T ss_dssp             EEECSGGGCCSSEEEEEE--ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEE
T ss_pred             EEeCcccCCceeEEEEec--CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCcc
Confidence            777776  444 444432  23457899999999877655 67899999996321          01222222 234567


Q ss_pred             EEEEecCCCEEEEEeCCCcEEEEEccc----------ceEEEEEEcCccEEEE------EEcCCCcEEEEEECCC--eE-
Q psy17610        258 VIQIKSDSKEAMSASTDGTCVLWDLIK----------STRLIIMILPSMIMSA------AYHPSEVQLITCSTNK--MI-  318 (515)
Q Consensus       258 ~~~~~~~~~~l~~~~~d~~i~iwd~~~----------~~~~~~~~~~~~~~~~------~~~~~~~~l~~~~~~~--~i-  318 (515)
                      .++|+|+|...++.-.|++|..||+..          .+.+..+..+...-..      ..+|||++|++...-.  .+ 
T Consensus       335 h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~  414 (595)
T 1fwx_A          335 HTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFL  414 (595)
T ss_dssp             EEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSC
T ss_pred             eEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccccc
Confidence            899999994444556689999999987          5566777666543222      3479999999876522  22 


Q ss_pred             ----------EEEeCCCCc
Q psy17610        319 ----------DYWETCDGS  327 (515)
Q Consensus       319 ----------~~~d~~~~~  327 (515)
                                .++|+..++
T Consensus       415 ~~gp~~~~~~ql~dis~~~  433 (595)
T 1fwx_A          415 NVGPLKPENDQLIDISGDK  433 (595)
T ss_dssp             CCCSSCCEEEEEEECSSSS
T ss_pred             cCCCCCCCcceEEEcCCCc
Confidence                      788886554

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=99.37  E-value=4.8e-10  Score=108.27  Aligned_cols=299  Identities=9%  Similarity=0.045  Sum_probs=181.8

Q ss_pred             CCEEEEEeC-CCeEEEEec-CCCceEEEecCCCCCCe----------EEEEEcCCCCEEEEecCCCcEEEEEccCCceee
Q psy17610        178 GKAILSGWN-DGFIRCFTP-QSGKLKFIIPNAHNRGV----------TALAITQDGTRLLSGGGEGQVRIWKLTRESQSL  245 (515)
Q Consensus       178 ~~~l~~~~~-dg~i~~~~~-~~~~~~~~~~~~~~~~v----------~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~  245 (515)
                      +..+++++. ++.|..+|. .+|+.+..........+          ..+++  .+..++.++.|+.+..+|..+.+...
T Consensus        62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W  139 (571)
T 2ad6_A           62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKINW  139 (571)
T ss_dssp             TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred             CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEEE
Confidence            456777777 889999999 89999877642221100          11222  35578888889999999986555444


Q ss_pred             EEeeccccC--ceEE-EEEecCCCEEEEEeC------CCcEEEEEcccceEEEEEEcCccE-------------------
Q psy17610        246 QCVLKEHTS--SVSV-IQIKSDSKEAMSAST------DGTCVLWDLIKSTRLIIMILPSMI-------------------  297 (515)
Q Consensus       246 ~~~~~~~~~--~v~~-~~~~~~~~~l~~~~~------d~~i~iwd~~~~~~~~~~~~~~~~-------------------  297 (515)
                      ......+..  .+.+ ... .+ ..++.++.      ++.|..+|.++++.+..+....+.                   
T Consensus       140 ~~~~~~~~~~~~~~~~P~v-~~-g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~  217 (571)
T 2ad6_A          140 EVEVCDPKVGSTLTQAPFV-AK-DTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQF  217 (571)
T ss_dssp             EEECCCGGGTCBCCSCCEE-ET-TEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCS
T ss_pred             EecCCCCCccceeccCCEE-EC-CEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCccccccccccccc
Confidence            433332211  1111 111 13 45555554      789999999999998877654321                   


Q ss_pred             --------------------EEEEEcCCCcEEEEEECC----------------CeEEEEeCCCCceEEEEecCCC----
Q psy17610        298 --------------------MSAAYHPSEVQLITCSTN----------------KMIDYWETCDGSIIRSLEGSDV----  337 (515)
Q Consensus       298 --------------------~~~~~~~~~~~l~~~~~~----------------~~i~~~d~~~~~~~~~~~~~~~----  337 (515)
                                          ..+++.++...++.+..+                +.|..+|..+++.+..+.....    
T Consensus       218 ~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d  297 (571)
T 2ad6_A          218 GLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWD  297 (571)
T ss_dssp             SHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSC
T ss_pred             ccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccc
Confidence                                135667776777766542                3699999999999988874320    


Q ss_pred             ----ccEEEEEEcCCCC---EEEEEcCCCeEEEEEccCCeeeeeccCCC-------------CCe---------------
Q psy17610        338 ----AAVNCVDFVDDGK---YFLTGGADQIVKMWMYREGVPCFVGIGHA-------------ASI---------------  382 (515)
Q Consensus       338 ----~~i~~~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-------------~~i---------------  382 (515)
                          ....-+....+|+   .++.++.+|.++++|..+++.+.......             .++               
T Consensus       298 ~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~  377 (571)
T 2ad6_A          298 FAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTN  377 (571)
T ss_dssp             CCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEE
T ss_pred             cccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceE
Confidence                1111223334674   67788999999999999998876543211             111               


Q ss_pred             -----------eEEEECCCCcEEEEEeCC-------------------------------------CcEEEEeCCCCcCc
Q psy17610        383 -----------TKIKISPDKKVIVSVSAD-------------------------------------GGIFLWTFPELEDD  414 (515)
Q Consensus       383 -----------~~~~~~~~~~~l~~~~~d-------------------------------------g~i~iw~~~~~~~~  414 (515)
                                 ..++++|+..++++...+                                     |.+..||+.+++..
T Consensus       378 ~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~  457 (571)
T 2ad6_A          378 ICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAK  457 (571)
T ss_dssp             ESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEE
T ss_pred             ECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEE
Confidence                       246788888888776554                                     33444443332210


Q ss_pred             cCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcC
Q psy17610        415 VGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVD  494 (515)
Q Consensus       415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~  494 (515)
                                           ........+....+...+..++.++.||.|+.+|..+|+.+.++.......-..+.+..
T Consensus       458 ---------------------W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~  516 (571)
T 2ad6_A          458 ---------------------WTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSF  516 (571)
T ss_dssp             ---------------------EEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEE
T ss_pred             ---------------------EEecCCCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEE
Confidence                                 00001111222223334667788999999999999999999888754311112234567


Q ss_pred             CCcEEEE
Q psy17610        495 DGKYFLT  501 (515)
Q Consensus       495 ~~~~l~s  501 (515)
                      +|+.++.
T Consensus       517 ~G~~yv~  523 (571)
T 2ad6_A          517 KGKQYIG  523 (571)
T ss_dssp             TTEEEEE
T ss_pred             CCEEEEE
Confidence            8875544

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=99.35  E-value=2.8e-09  Score=102.97  Aligned_cols=297  Identities=11%  Similarity=0.074  Sum_probs=188.0

Q ss_pred             CCEEEEEec-CceEEEEEC-CCCceeEEeeccCccCe----------EEEEeCCCCcEEEEEecCCcEEEEeCCCCceeE
Q psy17610         93 NNKVFVGTV-NCEIFLIDM-NSGFTLTLVNTCHTSAI----------YDLQFPVNFSSVFATCSKNDIRIWSVRTLNELL  160 (515)
Q Consensus        93 ~~~l~~~~~-d~~i~iw~~-~~~~~~~~~~~~h~~~v----------~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~  160 (515)
                      +..+++++. ++.|.-+|. ++|+.+-.........+          ..++.  ++..+++++.|+.+..+|.++|+.+.
T Consensus        62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W  139 (571)
T 2ad6_A           62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKINW  139 (571)
T ss_dssp             TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred             CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEEE
Confidence            556777777 889999999 88877655432211100          11222  24588888889999999999999988


Q ss_pred             EEEecCe----EEEE-EEEeeCCCEEEEEeC------CCeEEEEecCCCceEEEecCCCCC-------------------
Q psy17610        161 RISVMNM----ICAC-IVFTYDGKAILSGWN------DGFIRCFTPQSGKLKFIIPNAHNR-------------------  210 (515)
Q Consensus       161 ~~~~~~~----~v~~-~~~~~~~~~l~~~~~------dg~i~~~~~~~~~~~~~~~~~~~~-------------------  210 (515)
                      +......    .+.+ ... .+ ..+++++.      ++.|..+|.++|+.+..+......                   
T Consensus       140 ~~~~~~~~~~~~~~~~P~v-~~-g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~  217 (571)
T 2ad6_A          140 EVEVCDPKVGSTLTQAPFV-AK-DTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQF  217 (571)
T ss_dssp             EEECCCGGGTCBCCSCCEE-ET-TEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCS
T ss_pred             EecCCCCCccceeccCCEE-EC-CEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCccccccccccccc
Confidence            8764321    1111 111 13 45666654      789999999999998776432110                   


Q ss_pred             ------------------CeEEEEEcCCCCEEEEecCC----------------CcEEEEEccCCceeeEEeecccc---
Q psy17610        211 ------------------GVTALAITQDGTRLLSGGGE----------------GQVRIWKLTRESQSLQCVLKEHT---  253 (515)
Q Consensus       211 ------------------~v~~~~~~~~~~~l~~~~~d----------------~~i~iw~~~~~~~~~~~~~~~~~---  253 (515)
                                        ....+++.++...++.+..+                +.|..+|.++.+.........|.   
T Consensus       218 ~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d  297 (571)
T 2ad6_A          218 GLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWD  297 (571)
T ss_dssp             SHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSC
T ss_pred             ccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccc
Confidence                              00135666766667666532                25888888655444433333221   


Q ss_pred             -----CceEEEEEecCCC---EEEEEeCCCcEEEEEcccceEEEEEEcCc--------------cE--------------
Q psy17610        254 -----SSVSVIQIKSDSK---EAMSASTDGTCVLWDLIKSTRLIIMILPS--------------MI--------------  297 (515)
Q Consensus       254 -----~~v~~~~~~~~~~---~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--------------~~--------------  297 (515)
                           .++. +....+|+   .++.++.+|.+.++|..+++.+.......              ++              
T Consensus       298 ~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~  376 (571)
T 2ad6_A          298 FAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGT  376 (571)
T ss_dssp             CCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEE
T ss_pred             cccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCce
Confidence                 2221 22234674   56778889999999999998887765432              11              


Q ss_pred             ------------EEEEEcCCCcEEEEEE-------------------------------------CCCeEEEEeCCCCce
Q psy17610        298 ------------MSAAYHPSEVQLITCS-------------------------------------TNKMIDYWETCDGSI  328 (515)
Q Consensus       298 ------------~~~~~~~~~~~l~~~~-------------------------------------~~~~i~~~d~~~~~~  328 (515)
                                  ..++++|+...+++..                                     .++.+..||+.+++.
T Consensus       377 ~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~  456 (571)
T 2ad6_A          377 NICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKA  456 (571)
T ss_dssp             EESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCE
T ss_pred             EECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCE
Confidence                        2357788877776653                                     347899999999999


Q ss_pred             EEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCC-eeEEEECCCCcEEEE
Q psy17610        329 IRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAAS-ITKIKISPDKKVIVS  396 (515)
Q Consensus       329 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-i~~~~~~~~~~~l~~  396 (515)
                      +.++....  .+....+...+..+++++.||.++.+|.++++.+..+...... -.-+.+..+++.++.
T Consensus       457 ~W~~~~~~--~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv~  523 (571)
T 2ad6_A          457 KWTKWEKF--AAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYIG  523 (571)
T ss_dssp             EEEEEESS--CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred             EEEecCCC--CccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEEE
Confidence            88876542  2222222334567778999999999999999998877543221 122345567764443

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=99.34  E-value=1.8e-09  Score=104.12  Aligned_cols=256  Identities=11%  Similarity=0.054  Sum_probs=161.8

Q ss_pred             EEEEEecCceEEEEECCCCceeEEeeccC-cc--CeEE-EEeCCCCcEEEEEec------CCcEEEEeCCCCceeEEEEe
Q psy17610         95 KVFVGTVNCEIFLIDMNSGFTLTLVNTCH-TS--AIYD-LQFPVNFSSVFATCS------KNDIRIWSVRTLNELLRISV  164 (515)
Q Consensus        95 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~h-~~--~v~~-~~~~~~~~~l~~~~~------d~~i~iw~~~~~~~~~~~~~  164 (515)
                      +|++++.|+.|..+|.++|+.+-...... ..  .+.+ .... ++ .+++++.      ++.|+-+|.++|+.+.++..
T Consensus       123 rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~  200 (599)
T 1w6s_A          123 LILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA  200 (599)
T ss_dssp             EEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred             EEEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcC
Confidence            38888889999999999987765543221 10  1111 1111 33 5666553      78999999999999988774


Q ss_pred             cCeEE--------------------------------------EEEEEeeCCCEEEEEeCC----------------CeE
Q psy17610        165 MNMIC--------------------------------------ACIVFTYDGKAILSGWND----------------GFI  190 (515)
Q Consensus       165 ~~~~v--------------------------------------~~~~~~~~~~~l~~~~~d----------------g~i  190 (515)
                      .....                                      ..+++.++...++.+..+                +.|
T Consensus       201 ~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv  280 (599)
T 1w6s_A          201 TGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTI  280 (599)
T ss_dssp             SSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEE
T ss_pred             CCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceE
Confidence            32110                                      134566777778877665                379


Q ss_pred             EEEecCCCceEEEecCCCCC--------CeEEEEEc-CCC---CEEEEecCCCcEEEEEccCCceeeEEeecc-------
Q psy17610        191 RCFTPQSGKLKFIIPNAHNR--------GVTALAIT-QDG---TRLLSGGGEGQVRIWKLTRESQSLQCVLKE-------  251 (515)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~--------~v~~~~~~-~~~---~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~-------  251 (515)
                      ..+|.++|+.+..+...+..        ...-+... .+|   ..++.++.+|.+.++|..+.+......+..       
T Consensus       281 ~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~  360 (599)
T 1w6s_A          281 FGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKS  360 (599)
T ss_dssp             EEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEE
T ss_pred             EEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccc
Confidence            99999999998877544321        11112222 467   467778899999999986543322221110       


Q ss_pred             ----ccCce--------------------------EEEEEecCCCEEEEEe-----------------------------
Q psy17610        252 ----HTSSV--------------------------SVIQIKSDSKEAMSAS-----------------------------  272 (515)
Q Consensus       252 ----~~~~v--------------------------~~~~~~~~~~~l~~~~-----------------------------  272 (515)
                          ...++                          ..++++|+..++++..                             
T Consensus       361 ~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~  440 (599)
T 1w6s_A          361 VDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYP  440 (599)
T ss_dssp             ECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEE
T ss_pred             cccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceecc
Confidence                00011                          2356666665554421                             


Q ss_pred             ----------CCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEE
Q psy17610        273 ----------TDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNC  342 (515)
Q Consensus       273 ----------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~  342 (515)
                                ..|.+..||+.+++.+.......+...-.+...+..++.++.++.++.||.++++.+.+++........-
T Consensus       441 ~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P  520 (599)
T 1w6s_A          441 GPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYP  520 (599)
T ss_dssp             CTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCC
T ss_pred             CCcCCcccCCCcCeEEEEECCCCCEEeEecCCCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEecc
Confidence                      3478999999999988877655433322233456777889999999999999999999987654222233


Q ss_pred             EEEcCCCCEE
Q psy17610        343 VDFVDDGKYF  352 (515)
Q Consensus       343 ~~~~~~~~~l  352 (515)
                      +.+..+|+.+
T Consensus       521 ~~y~~~G~qy  530 (599)
T 1w6s_A          521 MTYTHKGTQY  530 (599)
T ss_dssp             EEEEETTEEE
T ss_pred             EEEEeCCEEE
Confidence            4555566543

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=99.33  E-value=2.8e-09  Score=102.70  Aligned_cols=296  Identities=11%  Similarity=0.075  Sum_probs=186.8

Q ss_pred             CCEEEEEec-CceEEEEEC-CCCceeEEeeccCcc----------CeEEEEeCCCCcE----EEEEecCCcEEEEeCCCC
Q psy17610         93 NNKVFVGTV-NCEIFLIDM-NSGFTLTLVNTCHTS----------AIYDLQFPVNFSS----VFATCSKNDIRIWSVRTL  156 (515)
Q Consensus        93 ~~~l~~~~~-d~~i~iw~~-~~~~~~~~~~~~h~~----------~v~~~~~~~~~~~----l~~~~~d~~i~iw~~~~~  156 (515)
                      +..|++++. ++.|.-+|. .+|+.+-........          ....++++|.+..    +++++.|+.+.-+|.++|
T Consensus        62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG  141 (599)
T 1w6s_A           62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG  141 (599)
T ss_dssp             TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred             CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence            566777777 889999999 888776554322111          0123455443444    888888999999999999


Q ss_pred             ceeEEEEecCe----EEEE-EEEeeCCCEEEEEe------CCCeEEEEecCCCceEEEecCCCCCC--------------
Q psy17610        157 NELLRISVMNM----ICAC-IVFTYDGKAILSGW------NDGFIRCFTPQSGKLKFIIPNAHNRG--------------  211 (515)
Q Consensus       157 ~~~~~~~~~~~----~v~~-~~~~~~~~~l~~~~------~dg~i~~~~~~~~~~~~~~~~~~~~~--------------  211 (515)
                      +.+.+......    .+.+ ... .++ .+++++      .++.|+.+|.++|+.+..+.......              
T Consensus       142 ~~~W~~~~~~~~~~~~~~ssP~v-~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~  219 (599)
T 1w6s_A          142 ETVWKVENSDIKVGSTLTIAPYV-VKD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPH  219 (599)
T ss_dssp             CEEEEEECCCGGGTCBCCSCCEE-ETT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGG
T ss_pred             CEEEeecCCCCCccceeecCCEE-ECC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccccc
Confidence            99888764321    1111 111 244 555555      37999999999999987764322110              


Q ss_pred             ----------------------e-EEEEEcCCCCEEEEecCC----------------CcEEEEEccCCceeeEEeeccc
Q psy17610        212 ----------------------V-TALAITQDGTRLLSGGGE----------------GQVRIWKLTRESQSLQCVLKEH  252 (515)
Q Consensus       212 ----------------------v-~~~~~~~~~~~l~~~~~d----------------~~i~iw~~~~~~~~~~~~~~~~  252 (515)
                                            + ..+++.++...++.+..+                +.|.-+|.++.+.........|
T Consensus       220 ~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~  299 (599)
T 1w6s_A          220 YGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPH  299 (599)
T ss_dssp             GCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTT
T ss_pred             ccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCC
Confidence                                  0 134666777777777655                3788888865554444443333


Q ss_pred             c--------CceEEEEEe-cCC---CEEEEEeCCCcEEEEEcccceEEEEEEcCc--------------cE---------
Q psy17610        253 T--------SSVSVIQIK-SDS---KEAMSASTDGTCVLWDLIKSTRLIIMILPS--------------MI---------  297 (515)
Q Consensus       253 ~--------~~v~~~~~~-~~~---~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--------------~~---------  297 (515)
                      .        .++. +... .+|   ..++.++.+|.+.++|.++++.+.......              ++         
T Consensus       300 d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~  378 (599)
T 1w6s_A          300 DEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRM  378 (599)
T ss_dssp             CSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCT
T ss_pred             ccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCC
Confidence            2        1221 2222 466   457778899999999999999887665321              11         


Q ss_pred             -----------------EEEEEcCCCcEEEEEE---------------------------------------CCCeEEEE
Q psy17610        298 -----------------MSAAYHPSEVQLITCS---------------------------------------TNKMIDYW  321 (515)
Q Consensus       298 -----------------~~~~~~~~~~~l~~~~---------------------------------------~~~~i~~~  321 (515)
                                       ..++++|+..++++..                                       ..|.+..|
T Consensus       379 ~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~  458 (599)
T 1w6s_A          379 DHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAY  458 (599)
T ss_dssp             TCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEE
T ss_pred             CCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEE
Confidence                             2356677666554421                                       34789999


Q ss_pred             eCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCe-eEEEECCCCcE
Q psy17610        322 ETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASI-TKIKISPDKKV  393 (515)
Q Consensus       322 d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i-~~~~~~~~~~~  393 (515)
                      |+.+++.+.+.....  +...-.+...+.+++.++.||.++.||.++|+.+.+++.....+ .-+.+..+|+.
T Consensus       459 D~~tG~~~W~~~~~~--~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~q  529 (599)
T 1w6s_A          459 NAITGDYKWEKMERF--AVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQ  529 (599)
T ss_dssp             CTTTCCEEEEEEESS--CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred             ECCCCCEEeEecCCC--CccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEE
Confidence            999999888776432  11111122246678889999999999999999988775433222 22445556663

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=99.33  E-value=1.6e-06  Score=90.14  Aligned_cols=408  Identities=11%  Similarity=0.044  Sum_probs=223.6

Q ss_pred             cCCCcEEEEEEecC------CCEEEEEec-CceEEEEECCCCceeEEeeccCccCeEEEEeC--CCCcEEEEEecCCcEE
Q psy17610         79 KDDSGISSLQYNPV------NNKVFVGTV-NCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFP--VNFSSVFATCSKNDIR  149 (515)
Q Consensus        79 ~~~~~v~~~~~s~~------~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~l~~~~~d~~i~  149 (515)
                      .-+..|.|+++.|.      .+++|+|.. |++++|+++++-+.+....-+......++.+.  ....+|+++-.||.+.
T Consensus       551 ~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~  630 (1158)
T 3ei3_A          551 EMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALF  630 (1158)
T ss_dssp             ECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEE
T ss_pred             CCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEE
Confidence            34678999999873      379999996 99999999987433322211112233444332  2346788888899876


Q ss_pred             EEeC--CCCceeEE--EEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCe-EEEEEcCC--CC
Q psy17610        150 IWSV--RTLNELLR--ISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGV-TALAITQD--GT  222 (515)
Q Consensus       150 iw~~--~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~--~~  222 (515)
                      -+.+  .+|+....  ..-...++.-..+...+..-+.+..+.-..++.-+ ++....- ..- ..+ ....|+..  .+
T Consensus       631 ~~~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~-~~l~~s~-l~~-~~v~~~~~F~se~~~~  707 (1158)
T 3ei3_A          631 YFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSN-HKLVFSN-VNL-KEVNYMCPLNSDGYPD  707 (1158)
T ss_dssp             EEEECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEESSSCEEEEESS-SSEEEEE-BSS-SCCCEEEEECCSSSTT
T ss_pred             EEEEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEECCCCEEEEEcC-CceEEec-cCh-HHhceEeccCcccCCC
Confidence            5554  34543322  22223344444444444433333334333444322 3433221 111 223 33345432  23


Q ss_pred             EEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCC----------------------------
Q psy17610        223 RLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTD----------------------------  274 (515)
Q Consensus       223 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------------------------  274 (515)
                      -++..+ ++.++|..++....-....++ -...+..++++|+.+.++.+..+                            
T Consensus       708 g~v~~~-~~~LrI~~i~~~~~~~~~~ip-L~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  785 (1158)
T 3ei3_A          708 SLALAN-NSTLTIGTIDEIQKLHIRTVP-LYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSS  785 (1158)
T ss_dssp             EEEEEC-SSCEEEEEECCSSSEEEEEEE-CSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECC
T ss_pred             cEEEEc-CCceEEEEecccCCeeEEEEe-CCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcccc
Confidence            455444 356999888543322232222 23456777777776655433211                            


Q ss_pred             ---------------------CcEEEEEcccceEEEEEEcCc--cEEEEEE---cC-CCcEEEEEE----------CCCe
Q psy17610        275 ---------------------GTCVLWDLIKSTRLIIMILPS--MIMSAAY---HP-SEVQLITCS----------TNKM  317 (515)
Q Consensus       275 ---------------------~~i~iwd~~~~~~~~~~~~~~--~~~~~~~---~~-~~~~l~~~~----------~~~~  317 (515)
                                           +.+++.|..+.+.+..+....  .+.+++.   .. ...++++|+          ..|.
T Consensus       786 ~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gr  865 (1158)
T 3ei3_A          786 SKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGR  865 (1158)
T ss_dssp             CCCC----------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEE
T ss_pred             cccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceE
Confidence                                 236677777666666655443  3444443   22 246788776          3578


Q ss_pred             EEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEE
Q psy17610        318 IDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSV  397 (515)
Q Consensus       318 i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~  397 (515)
                      |++|++..++.....+....+++++++-- +|++++..  ...+++|++...+.+..-..+-..|..+.....+++++.|
T Consensus       866 i~vf~v~~~kL~lv~~~~v~g~v~al~~~-~g~Lla~i--g~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~vg  942 (1158)
T 3ei3_A          866 IVVFQYSDGKLQTVAEKEVKGAVYSMVEF-NGKLLASI--NSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVG  942 (1158)
T ss_dssp             EEEEEEETTEEEEEEEEEESSCEEEEEEE-TTEEEEEE--TTEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEEE
T ss_pred             EEEEEEECCEEEEEEEEEcCCcCEEEeee-CCEEEEEc--CCEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEEE
Confidence            99999875443333333334678777644 35544443  4689999997654333111111123333333357789999


Q ss_pred             eCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCC----
Q psy17610        398 SADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDG----  473 (515)
Q Consensus       398 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~----  473 (515)
                      +.-..+.+...+..+.      .+           ........+.+++++.+-.++ .++.++.+|.+.+......    
T Consensus       943 D~~~Sv~~~~y~~~~~------~L-----------~~~a~D~~~~~vta~~~ld~~-t~l~aD~~gNl~vl~~~~~~~~~ 1004 (1158)
T 3ei3_A          943 DLMRSVLLLAYKPMEG------NF-----------EEIARDFNPNWMSAVEILDDD-NFLGAENAFNLFVCQKDSAATTD 1004 (1158)
T ss_dssp             ESSBCEEEEEEETTTT------EE-----------EEEEECCSCBCEEEEEEEETT-EEEEEETTSEEEEEEECTTCCST
T ss_pred             EhhheEEEEEEEcCCC------eE-----------EEEEeecccccEEEEEEEccC-cEEEEcCCCcEEEEecCCCCCCc
Confidence            8888888776543211      00           011112244568888887554 6777999999999876431    


Q ss_pred             ----eeeeeecccccceEEEEE---EcCC---------CcEEEEeecCCeEEEEE
Q psy17610        474 ----SIIRSLEGSDVAAVNCVD---FVDD---------GKYFLTGGADQIVKICL  512 (515)
Q Consensus       474 ----~~~~~~~~~~~~~v~~~~---~s~~---------~~~l~s~~~dg~v~iw~  512 (515)
                          ++...-.-|-...|+++.   +.+.         ...++.++.+|.|-+.-
T Consensus      1005 ~~~~~L~~~~~fhlG~~vt~~~~~sl~~~~~~~~~~~~~~~il~~T~~GsIg~l~ 1059 (1158)
T 3ei3_A         1005 EERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVT 1059 (1158)
T ss_dssp             TGGGBEEEEEEEECSSCEEEEEECCSCCC-------CEEEEEEEEETTSCEEEEE
T ss_pred             cccceeeeEEEEeCCCcEeeEEeeeeecCCCccccccccceEEEEecCCEEEEEE
Confidence                222332333346677775   3332         23577788999887653

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=99.33  E-value=4.4e-09  Score=101.64  Aligned_cols=297  Identities=13%  Similarity=0.121  Sum_probs=184.7

Q ss_pred             CCEEEEEecCceEEEEECCCCceeEEeeccCccCe--------EEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEe
Q psy17610         93 NNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAI--------YDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISV  164 (515)
Q Consensus        93 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v--------~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~  164 (515)
                      +..+++++.++.|.-+|.++|+.+-..........        ..++.  .+..+++++.++.+.-+|.++|+.+.+...
T Consensus        68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~  145 (582)
T 1flg_A           68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGKVVWKKKF  145 (582)
T ss_dssp             TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCCEEEEEEC
T ss_pred             CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCCEEeeecC
Confidence            45566666644599999999877655432211100        11222  245788888899999999999999988764


Q ss_pred             cCe----EEE-EEEEeeC---CC-EEEEEe------CCCeEEEEecCCCceEEEecCCCCCC------------------
Q psy17610        165 MNM----ICA-CIVFTYD---GK-AILSGW------NDGFIRCFTPQSGKLKFIIPNAHNRG------------------  211 (515)
Q Consensus       165 ~~~----~v~-~~~~~~~---~~-~l~~~~------~dg~i~~~~~~~~~~~~~~~~~~~~~------------------  211 (515)
                      ...    .+. ......+   ++ .+++++      .++.|..+|.++|+.+....... ..                  
T Consensus       146 ~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~-~~~~p~~~~~~~~~g~~g~~  224 (582)
T 1flg_A          146 ADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVE-GHMGRLNGKDSTVTGDVKAP  224 (582)
T ss_dssp             SCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESST-TCEEEETTEEEEESSCTTCT
T ss_pred             CCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCc-cccccccCcccccccccccc
Confidence            321    111 1112222   23 566654      37899999999999887653210 00                  


Q ss_pred             -----------------------eEEEEEcCCCCEEEEecC--------------------C----CcEEEEEccCCcee
Q psy17610        212 -----------------------VTALAITQDGTRLLSGGG--------------------E----GQVRIWKLTRESQS  244 (515)
Q Consensus       212 -----------------------v~~~~~~~~~~~l~~~~~--------------------d----~~i~iw~~~~~~~~  244 (515)
                                             -..++++|+...++.+..                    |    +.|.-+|..+.+..
T Consensus       225 ~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~  304 (582)
T 1flg_A          225 SWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVK  304 (582)
T ss_dssp             TSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEE
T ss_pred             cCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEE
Confidence                                   013466676667776553                    2    57888888655554


Q ss_pred             eEEeecccc--------CceEEEEEe-cCCC---EEEEEeCCCcEEEEEcccceEEEEEEcCccE---------------
Q psy17610        245 LQCVLKEHT--------SSVSVIQIK-SDSK---EAMSASTDGTCVLWDLIKSTRLIIMILPSMI---------------  297 (515)
Q Consensus       245 ~~~~~~~~~--------~~v~~~~~~-~~~~---~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~---------------  297 (515)
                      .......|.        .++. +... .+|+   .++.++.+|.++++|..+++.+........+               
T Consensus       305 W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~  383 (582)
T 1flg_A          305 WFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVE  383 (582)
T ss_dssp             EEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEE
T ss_pred             EEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeE
Confidence            444333332        1221 2222 4664   6788999999999999999988766543200               


Q ss_pred             -------------------------------EEEEEcCCCcEEEEEE---------------------------------
Q psy17610        298 -------------------------------MSAAYHPSEVQLITCS---------------------------------  313 (515)
Q Consensus       298 -------------------------------~~~~~~~~~~~l~~~~---------------------------------  313 (515)
                                                     ..++++|+...+++..                                 
T Consensus       384 ~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~  463 (582)
T 1flg_A          384 REGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDD  463 (582)
T ss_dssp             CTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSS
T ss_pred             ccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCC
Confidence                                           1345666655555432                                 


Q ss_pred             CCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCe-eEEEECCCCc
Q psy17610        314 TNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASI-TKIKISPDKK  392 (515)
Q Consensus       314 ~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i-~~~~~~~~~~  392 (515)
                      ..|.|..||+.+++.+.+.....  +...-.....+.+++.++.||.++.||.++|+.+.+++...... .-+.+..+|+
T Consensus       464 ~~G~l~A~D~~tG~~~W~~~~~~--~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~  541 (582)
T 1flg_A          464 HVGSLRAMDPVSGKVVWEHKEHL--PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGE  541 (582)
T ss_dssp             CSEEEEEECTTTCCEEEEEEESS--CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred             CcceEEEEECCCCCEEEEecCCC--CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCE
Confidence            25789999999999988776542  22111122246678889999999999999999998876543322 2256666776


Q ss_pred             EEE
Q psy17610        393 VIV  395 (515)
Q Consensus       393 ~l~  395 (515)
                      ..+
T Consensus       542 qYv  544 (582)
T 1flg_A          542 QYL  544 (582)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            433

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=99.32  E-value=2.8e-08  Score=86.50  Aligned_cols=249  Identities=10%  Similarity=0.013  Sum_probs=158.0

Q ss_pred             cEEEEEecCCcEEEEeCCCCce-----eEEEEecCeEEEEEEEeeCCCEEEEEe-CCCeEEEEecCCCceEEEecCCCCC
Q psy17610        137 SSVFATCSKNDIRIWSVRTLNE-----LLRISVMNMICACIVFTYDGKAILSGW-NDGFIRCFTPQSGKLKFIIPNAHNR  210 (515)
Q Consensus       137 ~~l~~~~~d~~i~iw~~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~~~~~~~~~~~~~~~~~~  210 (515)
                      ++|+.+.. +.|+.++++....     ...+.........+++++++..|+.+. ..+.|..+++.++...... .....
T Consensus         2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~-~~~~~   79 (267)
T 1npe_A            2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTII-RQDLG   79 (267)
T ss_dssp             EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEE-CTTCC
T ss_pred             cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEE-ECCCC
Confidence            45555553 4788888875432     112222334678899999776666554 5689999999876554433 22335


Q ss_pred             CeEEEEEcCCCCEEE-EecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeC---CCcEEEEEcccce
Q psy17610        211 GVTALAITQDGTRLL-SGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST---DGTCVLWDLIKST  286 (515)
Q Consensus       211 ~v~~~~~~~~~~~l~-~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~iwd~~~~~  286 (515)
                      ....+++++++..|+ +-...+.|.+++++.......  ..........++++|++..++.+..   .+.|..+++....
T Consensus        80 ~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~--~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~  157 (267)
T 1npe_A           80 SPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVL--FDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN  157 (267)
T ss_dssp             CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE--ECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC
T ss_pred             CccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEE--EECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC
Confidence            678999999765555 445567899999863322211  2222245688999997676666554   3678888875433


Q ss_pred             EEEEEEc-CccEEEEEEcCCCcEEEEEE-CCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEE
Q psy17610        287 RLIIMIL-PSMIMSAAYHPSEVQLITCS-TNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMW  364 (515)
Q Consensus       287 ~~~~~~~-~~~~~~~~~~~~~~~l~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~  364 (515)
                      ....... ......++++|++..|+.+. ..+.|..+|.........+...  .....++.. ++.++++...++.|..+
T Consensus       158 ~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~--~~P~gi~~d-~~~lyva~~~~~~v~~~  234 (267)
T 1npe_A          158 RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGL--QYPFAVTSY-GKNLYYTDWKTNSVIAM  234 (267)
T ss_dssp             CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECC--CSEEEEEEE-TTEEEEEETTTTEEEEE
T ss_pred             cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCC--CCceEEEEe-CCEEEEEECCCCeEEEE
Confidence            2222212 23578899999877666555 4679999998765443333322  334566664 44455555567899999


Q ss_pred             EccCCeeeeeccCCC-CCeeEEEECCCCc
Q psy17610        365 MYREGVPCFVGIGHA-ASITKIKISPDKK  392 (515)
Q Consensus       365 d~~~~~~~~~~~~~~-~~i~~~~~~~~~~  392 (515)
                      |..+++.+..+.... .....+++.|++.
T Consensus       235 d~~~g~~~~~i~~g~~~~p~gi~~~~~~~  263 (267)
T 1npe_A          235 DLAISKEMDTFHPHKQTRLYGITIALSQC  263 (267)
T ss_dssp             ETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred             eCCCCCceEEEccccccccceeeecCccC
Confidence            999998887775433 2467788887754

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=99.32  E-value=9.1e-13  Score=120.53  Aligned_cols=204  Identities=8%  Similarity=-0.012  Sum_probs=117.3

Q ss_pred             CCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEE-
Q psy17610        264 DSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNC-  342 (515)
Q Consensus       264 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~-  342 (515)
                      ++..+++++.|+.|+.||..+++.+..+.. ..+.+..+..++..+++++.++.++.||..+++.+..+..+....+.+ 
T Consensus         8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~s   86 (369)
T 2hz6_A            8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQAS   86 (369)
T ss_dssp             CTTEEEEEETTSEEEEEETTTCCEEEEEEC-CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTC
T ss_pred             eCCEEEEEcCCCEEEEEECCCCCEEEEecC-CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccC
Confidence            577899999999999999999999888876 555555555677777777899999999999998876665432111110 


Q ss_pred             EEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccc
Q psy17610        343 VDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLS  422 (515)
Q Consensus       343 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~  422 (515)
                      ..+. ++..+++++.++.++.||.++|+.+..+..+.    ...++|++..+++++.|+.|+.||..+++......    
T Consensus        87 p~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~----  157 (369)
T 2hz6_A           87 PCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNAT----  157 (369)
T ss_dssp             SCC------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEE----
T ss_pred             ceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEe----
Confidence            1111 34567788889999999999999887776543    24566788899999999999999988764211100    


Q ss_pred             eeeecccccccceeeecCcccEEEeeeccCC---cEEEEeecCCeEEEEecCCCeeeeeecccccceE-EEEEEcCCCc
Q psy17610        423 SKISRSTARSTRLIIMILPSMIMSAAYHPSE---VQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAV-NCVDFVDDGK  497 (515)
Q Consensus       423 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~---~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v-~~~~~s~~~~  497 (515)
                        ..                ......++++.   ..+++++.+|.|+.||..+|+.+......  .++ ....++++|.
T Consensus       158 --~~----------------~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~--~pv~~~~~~~~dg~  216 (369)
T 2hz6_A          158 --YF----------------DYAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYA--SPVVAFYVWQREGL  216 (369)
T ss_dssp             --EE----------------EECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECS--SCEEEEEECTTSSC
T ss_pred             --cc----------------cccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCC--CceEEEEEecCCce
Confidence              00                01122333332   45777888999999999999988777643  344 3345566664

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=99.30  E-value=1.1e-06  Score=85.61  Aligned_cols=367  Identities=8%  Similarity=-0.043  Sum_probs=204.3

Q ss_pred             CcEEEEEEecCCCEEEEE-ecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec--CCcEEEEeCCCCce
Q psy17610         82 SGISSLQYNPVNNKVFVG-TVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS--KNDIRIWSVRTLNE  158 (515)
Q Consensus        82 ~~v~~~~~s~~~~~l~~~-~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~--d~~i~iw~~~~~~~  158 (515)
                      .....+|+++.++.|+.+ ...+.|.+.+++.. ....+....-.....|++.|.+..|+.+..  .+.|...+++. ..
T Consensus        84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~-~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG-~~  161 (619)
T 3s94_A           84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGS-LRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG-SS  161 (619)
T ss_dssp             SCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTS-CS
T ss_pred             CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCC-CEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCC-Cc
Confidence            568899999966656555 45689999999863 333333334456788999997667777764  35666666653 33


Q ss_pred             eEEEE-ecCeEEEEEEEeeCCCEEEEEe-CCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEE
Q psy17610        159 LLRIS-VMNMICACIVFTYDGKAILSGW-NDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIW  236 (515)
Q Consensus       159 ~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw  236 (515)
                      ...+. ..-.....+++++++..|..+. ..+.|...+++........ .........+++..+ ..+++-..++.|...
T Consensus       162 ~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~-~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~  239 (619)
T 3s94_A          162 RFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVV-KGSLPHPFALTLFED-ILYWTDWSTHSILAC  239 (619)
T ss_dssp             CEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC----------CCCEEESSS-EEEEECTTTCSEEEE
T ss_pred             eEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEE-eCCCCCceEEEEeCC-EEEEecCCCCEEEEE
Confidence            33332 2333468899999877776654 4567999998754433222 211222345666655 344444456778887


Q ss_pred             EccCCceee-----------EEeeccc------------cCceEEEEE-----------ecCC--------------CEE
Q psy17610        237 KLTRESQSL-----------QCVLKEH------------TSSVSVIQI-----------KSDS--------------KEA  268 (515)
Q Consensus       237 ~~~~~~~~~-----------~~~~~~~------------~~~v~~~~~-----------~~~~--------------~~l  268 (515)
                      |..+.....           +..+...            .+....+++           .|.|              +.+
T Consensus       240 d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~~  319 (619)
T 3s94_A          240 NKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATEL  319 (619)
T ss_dssp             ESSSCCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSEE
T ss_pred             ECCCCcccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCCCceE
Confidence            764322110           0000000            000111111           1111              112


Q ss_pred             EEEeCCCcEEEEEcccceEEE-EEE--cCccEEEEEEcCCCcEEEEEE-CCCeEEEEeCCCCceEEEEecCCCccEEEEE
Q psy17610        269 MSASTDGTCVLWDLIKSTRLI-IMI--LPSMIMSAAYHPSEVQLITCS-TNKMIDYWETCDGSIIRSLEGSDVAAVNCVD  344 (515)
Q Consensus       269 ~~~~~d~~i~iwd~~~~~~~~-~~~--~~~~~~~~~~~~~~~~l~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~  344 (515)
                      +.-+..+.|+..++....... .+.  .-..+..+++.+.+..++.+. ..+.|+.+++........+.. .......++
T Consensus       320 Ll~~~~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~-~~~~p~GlA  398 (619)
T 3s94_A          320 LLLARRTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTA-QIAHPDGIA  398 (619)
T ss_dssp             EEEEESSCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS-SCSCCCEEE
T ss_pred             EEEEcccceEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEEC-CCCCcCceE
Confidence            222223456666665443211 111  123577899998766666554 477888888865443333322 224567889


Q ss_pred             EcC-CCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeC--CCcEEEEeCCCCcCccCCCccc
Q psy17610        345 FVD-DGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSA--DGGIFLWTFPELEDDVGDSRSL  421 (515)
Q Consensus       345 ~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--dg~i~iw~~~~~~~~~~~~~~~  421 (515)
                      +.+ .++++++-...+.|.+.++............-....++++.|....|..+..  ...|...++......       
T Consensus       399 vD~~~~~lY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~-------  471 (619)
T 3s94_A          399 VDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRV-------  471 (619)
T ss_dssp             EETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-------
T ss_pred             EecccCcEEEEeCCCCcEEEEeCCCCeEEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccE-------
Confidence            986 4556666667789999998654332222233456789999997555555543  245555554432110       


Q ss_pred             ceeeecccccccceeeecCcccEEEeeeccCCcEEEEeec-CCeEEEEecCCC
Q psy17610        422 SSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCST-NKMIDYWETCDG  473 (515)
Q Consensus       422 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~v~iwd~~~~  473 (515)
                                   ......-...+.+++++++..|..+.. .+.|..+++...
T Consensus       472 -------------~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~  511 (619)
T 3s94_A          472 -------------VLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGT  511 (619)
T ss_dssp             -------------EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSC
T ss_pred             -------------EEEeCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCC
Confidence                         000111234778999987777766654 467888887543

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=99.30  E-value=1.7e-12  Score=118.76  Aligned_cols=203  Identities=11%  Similarity=0.057  Sum_probs=116.3

Q ss_pred             CCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccC-c
Q psy17610        177 DGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTS-S  255 (515)
Q Consensus       177 ~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~-~  255 (515)
                      ++..+++++.||.|..||..+|+.+..+..   ..+.+..+..++..+++++.|+.|+.||..+++..  ..+..+.. .
T Consensus         8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~---~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~--w~~~~~~~~~   82 (369)
T 2hz6_A            8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE---DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGL--TKLPFTIPEL   82 (369)
T ss_dssp             CTTEEEEEETTSEEEEEETTTCCEEEEEEC---CCSCCCC-----CCEEECTTTCCEEEC-----CCS--EECSCCHHHH
T ss_pred             eCCEEEEEcCCCEEEEEECCCCCEEEEecC---CCceecceEcCCCEEEEeCCCCEEEEEECCCCcee--eeeeccCccc
Confidence            577899999999999999999999888743   44555555567777888889999999998544332  22222211 1


Q ss_pred             eE-EEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEec
Q psy17610        256 VS-VIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEG  334 (515)
Q Consensus       256 v~-~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~  334 (515)
                      +. ...+. ++..+++++.++.++.||.++++.+..+..+..   ..++|++..+++++.++.++.||..+++.+..+..
T Consensus        83 ~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~---~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~  158 (369)
T 2hz6_A           83 VQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA---DSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATY  158 (369)
T ss_dssp             HTTCSCC------CCCCEEEEEEEEECCC-------------------------EEEEEEEEEEECCCSSSSSCCCEEEE
T ss_pred             cccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc---ccccccCCEEEEEecCCEEEEEECCCCCEEEeEec
Confidence            10 00111 345677888899999999999988777655442   34566888999999999999999999988766543


Q ss_pred             CCCccEEEEEEcCCC---CEEEEEcCCCeEEEEEccCCeeeeeccCCCCCee-EEEECCCCc
Q psy17610        335 SDVAAVNCVDFVDDG---KYFLTGGADQIVKMWMYREGVPCFVGIGHAASIT-KIKISPDKK  392 (515)
Q Consensus       335 ~~~~~i~~~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~-~~~~~~~~~  392 (515)
                      ..   .....+.++.   ..+++++.+|.+..||..+++.+...... .++. ...+++++.
T Consensus       159 ~~---~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~-~pv~~~~~~~~dg~  216 (369)
T 2hz6_A          159 FD---YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYA-SPVVAFYVWQREGL  216 (369)
T ss_dssp             EE---ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECS-SCEEEEEECTTSSC
T ss_pred             cc---ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCC-CceEEEEEecCCce
Confidence            21   1223344332   45777888999999999999888776533 3443 334455553

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=99.30  E-value=1.2e-06  Score=85.29  Aligned_cols=410  Identities=10%  Similarity=-0.034  Sum_probs=226.4

Q ss_pred             EecCCCcEEEEEEecCCCEEEEEec-CceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec-CCcEEEEeCC
Q psy17610         77 LLKDDSGISSLQYNPVNNKVFVGTV-NCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS-KNDIRIWSVR  154 (515)
Q Consensus        77 ~~~~~~~v~~~~~s~~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~  154 (515)
                      +...-..+..++|++.++.|..+.. .+.|..++++.......+..........+++.+.+..|+.+.. .+.|.+.+++
T Consensus        35 ~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~d  114 (619)
T 3s94_A           35 VVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLD  114 (619)
T ss_dssp             -CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred             EEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECC
Confidence            3344567889999997777776654 5789999988643223333333356889999997667766655 7889999987


Q ss_pred             CCceeEEEE-ecCeEEEEEEEeeCCCEEEEEeC--CCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEe-cCC
Q psy17610        155 TLNELLRIS-VMNMICACIVFTYDGKAILSGWN--DGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSG-GGE  230 (515)
Q Consensus       155 ~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~--dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d  230 (515)
                      ... ...+. ..-.....+++.|.+..|+....  .+.|...+++........ ...-...+.+++++++..|..+ ...
T Consensus       115 G~~-~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~-~~~~~~P~Glald~~~~~LY~aD~~~  192 (619)
T 3s94_A          115 GSL-RKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIII-NSEIYWPNGLTLDYEEQKLYWADAKL  192 (619)
T ss_dssp             SCS-CEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE-CSSCSSEEEEEEETTTTEEEEEETTT
T ss_pred             CCC-EEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEE-eCCCCCCcEEEEEccCCEEEEEeCCC
Confidence            543 33333 33334578899997666666553  467777777654443333 2344567899999976666554 456


Q ss_pred             CcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC----------------
Q psy17610        231 GQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP----------------  294 (515)
Q Consensus       231 ~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~----------------  294 (515)
                      +.|..++++.......  ..+.......+++..+ ..+++-...+.|...|..+++....+...                
T Consensus       193 ~~I~~~~~dG~~~~~~--~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp  269 (619)
T 3s94_A          193 NFIHKSNLDGTNRQAV--VKGSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGEGLREIHSDIFSPMDIHAFSQQRQP  269 (619)
T ss_dssp             CCEEEESSSCCEEC-----------CCCEEESSS-EEEEECTTTCSEEEEESSSCCCCEECCSCCCCCSEEEECCGGGSC
T ss_pred             CeEEEecCCCCccEEE--EeCCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCcccEEEecCCCCCcEEEEEccccCC
Confidence            7888888853322221  1111222245566544 33334344567888887655432221100                


Q ss_pred             ----------ccEEEEEE-----------cC-------CC-------cEEEEEECCCeEEEEeCCCCceE-EEEecCCCc
Q psy17610        295 ----------SMIMSAAY-----------HP-------SE-------VQLITCSTNKMIDYWETCDGSII-RSLEGSDVA  338 (515)
Q Consensus       295 ----------~~~~~~~~-----------~~-------~~-------~~l~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~  338 (515)
                                .....+++           .|       ++       ..++.-+..+.|+..++...... ..+......
T Consensus       270 ~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~~Ll~~~~~~i~~i~l~~~~~~~~~~~~~~l~  349 (619)
T 3s94_A          270 NATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATELLLLARRTDLRRISLDTPDFTDIVLQLEDIR  349 (619)
T ss_dssp             CCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSEEEEEEESSCEEEEESSSTTCCCEECCCSCCS
T ss_pred             CccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCCCceEEEEEcccceEEEecCCCccceeEEeccccC
Confidence                      00001111           11       11       11222223445666666554321 112222224


Q ss_pred             cEEEEEEcCCCC-EEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEE-EEEeCCCcEEEEeCCCCcCccC
Q psy17610        339 AVNCVDFVDDGK-YFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVI-VSVSADGGIFLWTFPELEDDVG  416 (515)
Q Consensus       339 ~i~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~iw~~~~~~~~~~  416 (515)
                      .+..++|.+.+. ++++-...+.|+.+++............-.....+++.+.++.| ++-+..+.|.+.++......  
T Consensus       350 ~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~--  427 (619)
T 3s94_A          350 HAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRK--  427 (619)
T ss_dssp             SEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE--
T ss_pred             ccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEE--
Confidence            567899998544 44455567889999886543333333333567789998754444 44455678888887643210  


Q ss_pred             CCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeec--CCeEEEEecCCCeeeeeecccccceEEEEEEcC
Q psy17610        417 DSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCST--NKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVD  494 (515)
Q Consensus       417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~--dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~  494 (515)
                                        ......-.....+++.|....|.....  .+.|...++. |.....+........+.|++++
T Consensus       428 ------------------~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~d-G~~~~~l~~~~l~~P~GlalD~  488 (619)
T 3s94_A          428 ------------------ILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALD-GSDRVVLVNTSLGWPNGLALDY  488 (619)
T ss_dssp             ------------------EEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCSCEEEECSSCSCEEEEEEET
T ss_pred             ------------------EEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccC-CCccEEEEeCCCCCCeeeEEcc
Confidence                              000011234788999997555554442  3567766654 4333333322235678899998


Q ss_pred             CCcEEEEeec-CCeEEEEE
Q psy17610        495 DGKYFLTGGA-DQIVKICL  512 (515)
Q Consensus       495 ~~~~l~s~~~-dg~v~iw~  512 (515)
                      +++.|..+.. .+.|...+
T Consensus       489 ~~~~LY~aD~~~~~I~~~~  507 (619)
T 3s94_A          489 DEGKIYWGDAKTDKIEVMN  507 (619)
T ss_dssp             TTTEEEEEETTTTEEEEEE
T ss_pred             cCCEEEEEECCCCEEEEEe
Confidence            7766666543 34555544

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=99.28  E-value=2.9e-06  Score=88.24  Aligned_cols=400  Identities=12%  Similarity=0.109  Sum_probs=233.2

Q ss_pred             CCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCC------CcEEEEEec-CCcEEEEeC
Q psy17610         81 DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVN------FSSVFATCS-KNDIRIWSV  153 (515)
Q Consensus        81 ~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~------~~~l~~~~~-d~~i~iw~~  153 (515)
                      +..|.+.+.+  +.+++.++ ++.+.+++++++.........-...|.|+++.|.      ++++++++. |++++|+++
T Consensus       513 ~~~I~~As~n--~~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL  589 (1158)
T 3ei3_A          513 AKNISVASCN--SSQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKL  589 (1158)
T ss_dssp             CCCCCEEEEC--SSEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEET
T ss_pred             CCEEEEEEeC--CCEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEEC
Confidence            4467777655  35677775 6788888887642221111223567999999763      368888886 999999999


Q ss_pred             CCCceeEEEEec-CeEEEEEEEee--CCCEEEEEeCCCeEEEEec--CCCceEEE--ecCCCCCCeEEEEEcCCCCEEEE
Q psy17610        154 RTLNELLRISVM-NMICACIVFTY--DGKAILSGWNDGFIRCFTP--QSGKLKFI--IPNAHNRGVTALAITQDGTRLLS  226 (515)
Q Consensus       154 ~~~~~~~~~~~~-~~~v~~~~~~~--~~~~l~~~~~dg~i~~~~~--~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~  226 (515)
                      .+.+.+....-. .....++.+..  ...+|.+|-.||.+.-+.+  .+|+....  ...+ ..++.-..+...+..-+.
T Consensus       590 ~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~  668 (1158)
T 3ei3_A          590 PSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVF  668 (1158)
T ss_dssp             TTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEEE
T ss_pred             CCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccceeEEcC-CCceEEEEEeeCCceeEE
Confidence            987766544321 12333444332  3357889999998765544  45554322  2123 345554445444433333


Q ss_pred             ecCCCcEEEEEccCCceeeEEeeccccCceE-EEEEecC--CCEEEEEeCCCcEEEEEccc--ceEEEEEEcCccEEEEE
Q psy17610        227 GGGEGQVRIWKLTRESQSLQCVLKEHTSSVS-VIQIKSD--SKEAMSASTDGTCVLWDLIK--STRLIIMILPSMIMSAA  301 (515)
Q Consensus       227 ~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~-~~~~~~~--~~~l~~~~~d~~i~iwd~~~--~~~~~~~~~~~~~~~~~  301 (515)
                      +..+....++.-+ .  ..... +-....+. ...|+..  .+-++..+ ++.+++..+..  .-..+.+.....+..++
T Consensus       669 a~s~rp~liy~~~-~--~l~~s-~l~~~~v~~~~~F~se~~~~g~v~~~-~~~LrI~~i~~~~~~~~~~ipL~~Tprri~  743 (1158)
T 3ei3_A          669 ACSDRPTVIYSSN-H--KLVFS-NVNLKEVNYMCPLNSDGYPDSLALAN-NSTLTIGTIDEIQKLHIRTVPLYESPRKIC  743 (1158)
T ss_dssp             EESSSCEEEEESS-S--SEEEE-EBSSSCCCEEEEECCSSSTTEEEEEC-SSCEEEEEECCSSSEEEEEEECSSEEEEEE
T ss_pred             EECCCCEEEEEcC-C--ceEEe-ccChHHhceEeccCcccCCCcEEEEc-CCceEEEEecccCCeeEEEEeCCCCceEEE
Confidence            3334444455432 1  11111 11112232 3334322  23344444 45688887643  33455666777888888


Q ss_pred             EcCCCcEEEEEEC-------------------------------------------------CCeEEEEeCCCCceEEEE
Q psy17610        302 YHPSEVQLITCST-------------------------------------------------NKMIDYWETCDGSIIRSL  332 (515)
Q Consensus       302 ~~~~~~~l~~~~~-------------------------------------------------~~~i~~~d~~~~~~~~~~  332 (515)
                      ++|+.+.++++..                                                 .+.+++.|..+.+.+..+
T Consensus       744 y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~  823 (1158)
T 3ei3_A          744 YQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAH  823 (1158)
T ss_dssp             EEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCCCCC----------CCCEEEEEEEEEEETTTCCEEEEE
T ss_pred             EcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcccccccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEE
Confidence            8887776554331                                                 134778888888888887


Q ss_pred             ecCCCccEEEEEE---cC-CCCEEEEEc----------CCCeEEEEEccCCeeeee-ccCCCCCeeEEEECCCCcEEEEE
Q psy17610        333 EGSDVAAVNCVDF---VD-DGKYFLTGG----------ADQIVKMWMYREGVPCFV-GIGHAASITKIKISPDKKVIVSV  397 (515)
Q Consensus       333 ~~~~~~~i~~~~~---~~-~~~~l~~~~----------~dg~i~i~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~  397 (515)
                      .......+.+++.   .. ...++++|+          ..|.|.+|++..++.... -....+++++++-- +|++|+ +
T Consensus       824 ~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~-~g~Lla-~  901 (1158)
T 3ei3_A          824 QFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEF-NGKLLA-S  901 (1158)
T ss_dssp             ECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSCEEEEEEE-TTEEEE-E
T ss_pred             eCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCcCEEEeee-CCEEEE-E
Confidence            7766566666654   22 246888886          358899999875432221 12346788887643 454444 4


Q ss_pred             eCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEE--ecCCCee
Q psy17610        398 SADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYW--ETCDGSI  475 (515)
Q Consensus       398 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iw--d~~~~~~  475 (515)
                       ....+++|++...+.       +.....            ..+ .+..+.....++++++|+.-..|.++  +...+++
T Consensus       902 -ig~~l~vy~l~~~~~-------L~~~~~------------~~~-~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L  960 (1158)
T 3ei3_A          902 -INSTVRLYEWTTEKE-------LRTECN------------HYN-NIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNF  960 (1158)
T ss_dssp             -ETTEEEEEEECTTSC-------EEEEEE------------ECC-CSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEE
T ss_pred             -cCCEEEEEECCCCce-------EEEEee------------ccc-cEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeE
Confidence             346899999865321       000000            000 12222333457889999888777765  4445555


Q ss_pred             eeeecccccceEEEEEEcCCCcEEEEeecCCeEEEEEE
Q psy17610        476 IRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLY  513 (515)
Q Consensus       476 ~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~  513 (515)
                      ...-.......++++.|-.++ .++.+..+|.+.+..+
T Consensus       961 ~~~a~D~~~~~vta~~~ld~~-t~l~aD~~gNl~vl~~  997 (1158)
T 3ei3_A          961 EEIARDFNPNWMSAVEILDDD-NFLGAENAFNLFVCQK  997 (1158)
T ss_dssp             EEEEECCSCBCEEEEEEEETT-EEEEEETTSEEEEEEE
T ss_pred             EEEEeecccccEEEEEEEccC-cEEEEcCCCcEEEEec
Confidence            544444444778899887555 5677899999998876

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=99.27  E-value=9.6e-09  Score=87.21  Aligned_cols=208  Identities=9%  Similarity=-0.018  Sum_probs=140.2

Q ss_pred             ceEEEEEEcCcc--EEEEEEcCCCcEEEEEEC--CCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCe
Q psy17610        285 STRLIIMILPSM--IMSAAYHPSEVQLITCST--NKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQI  360 (515)
Q Consensus       285 ~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~--~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~  360 (515)
                      .+.+..+.++..  ...+.+++++..+++.+.  ++.|+++|+.+++.+..+..........+++.. +++.++.-.++.
T Consensus         9 ~~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g-~~lyv~t~~~~~   87 (266)
T 2iwa_A            9 VEVLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLN-EKLYQVVWLKNI   87 (266)
T ss_dssp             EEEEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEETTCSE
T ss_pred             ceEEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeC-CEEEEEEecCCE
Confidence            455666666643  689999998644444433  589999999999999998754323334555652 344455566889


Q ss_pred             EEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecC
Q psy17610        361 VKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMIL  440 (515)
Q Consensus       361 i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  440 (515)
                      +.++|..+.+.+.++.....  ....+++|++.|+++..++.|.++|..+.+....    .              .....
T Consensus        88 v~viD~~t~~v~~~i~~g~~--~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~----I--------------~Vg~~  147 (266)
T 2iwa_A           88 GFIYDRRTLSNIKNFTHQMK--DGWGLATDGKILYGSDGTSILYEIDPHTFKLIKK----H--------------NVKYN  147 (266)
T ss_dssp             EEEEETTTTEEEEEEECCSS--SCCEEEECSSSEEEECSSSEEEEECTTTCCEEEE----E--------------ECEET
T ss_pred             EEEEECCCCcEEEEEECCCC--CeEEEEECCCEEEEECCCCeEEEEECCCCcEEEE----E--------------EECCC
Confidence            99999999988888753311  1244556888788777788999999876531100    0              00000


Q ss_pred             ---cccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccc------------cceEEEEEEcCCCc-EEEEeec
Q psy17610        441 ---PSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSD------------VAAVNCVDFVDDGK-YFLTGGA  504 (515)
Q Consensus       441 ---~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~------------~~~v~~~~~s~~~~-~l~s~~~  504 (515)
                         -..++.+.|. +|...+....++.|.+.|..+++.+..+....            ....+.++|+|+++ +++++..
T Consensus       148 ~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~  226 (266)
T 2iwa_A          148 GHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKL  226 (266)
T ss_dssp             TEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETT
T ss_pred             CcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCC
Confidence               0125677777 67655555567899999999999988876421            13568999999986 4555667


Q ss_pred             CCeEEEEEEe
Q psy17610        505 DQIVKICLYI  514 (515)
Q Consensus       505 dg~v~iw~~~  514 (515)
                      .+.+.+-++.
T Consensus       227 ~~~v~~i~l~  236 (266)
T 2iwa_A          227 WPKLFEIKLH  236 (266)
T ss_dssp             CSEEEEEEEE
T ss_pred             CCeEEEEEEe
Confidence            7888887764

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=99.26  E-value=1.4e-08  Score=98.05  Aligned_cols=260  Identities=12%  Similarity=0.119  Sum_probs=162.4

Q ss_pred             CCEEEEEecCceEEEEECCCCceeEEeeccC-cc--CeE-EEEeC---CCCc-EEEEEec------CCcEEEEeCCCCce
Q psy17610         93 NNKVFVGTVNCEIFLIDMNSGFTLTLVNTCH-TS--AIY-DLQFP---VNFS-SVFATCS------KNDIRIWSVRTLNE  158 (515)
Q Consensus        93 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h-~~--~v~-~~~~~---~~~~-~l~~~~~------d~~i~iw~~~~~~~  158 (515)
                      +..+++++.++.|.-+|.++|+.+-...... ..  .+. .....   .+++ .+++++.      ++.|.-+|.++|+.
T Consensus       117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~  196 (582)
T 1flg_A          117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE  196 (582)
T ss_dssp             TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE
T ss_pred             CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE
Confidence            5678888899999999999987765543221 10  111 11111   1233 5555543      78999999999998


Q ss_pred             eEEEEecCeEE-----------------------------------------EEEEEeeCCCEEEEEeC-----------
Q psy17610        159 LLRISVMNMIC-----------------------------------------ACIVFTYDGKAILSGWN-----------  186 (515)
Q Consensus       159 ~~~~~~~~~~v-----------------------------------------~~~~~~~~~~~l~~~~~-----------  186 (515)
                      +.+.......+                                         ..+++.|+...++.+..           
T Consensus       197 ~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~  276 (582)
T 1flg_A          197 IWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWART  276 (582)
T ss_dssp             EEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGS
T ss_pred             EeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccc
Confidence            88664321000                                         12456667777776663           


Q ss_pred             ---------C----CeEEEEecCCCceEEEecCC-CC--------CCeEEEEEc-CCCC---EEEEecCCCcEEEEEccC
Q psy17610        187 ---------D----GFIRCFTPQSGKLKFIIPNA-HN--------RGVTALAIT-QDGT---RLLSGGGEGQVRIWKLTR  240 (515)
Q Consensus       187 ---------d----g~i~~~~~~~~~~~~~~~~~-~~--------~~v~~~~~~-~~~~---~l~~~~~d~~i~iw~~~~  240 (515)
                               |    +.|..+|.++|+.+..+... |.        .++ -+... .+|+   .++.++.+|.++++|..+
T Consensus       277 ~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~-l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~t  355 (582)
T 1flg_A          277 AKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELV-LFDYKAKDGKIVKATAHADRNGFFYVVDRSN  355 (582)
T ss_dssp             CTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCE-EEEEECSSSCEEEEEEEECTTSEEEEEETTT
T ss_pred             cCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcE-EEeeecCCCCEEEEEEEECCCceEEEEECCC
Confidence                     2    58999999999998887433 21        122 12222 4664   678899999999999865


Q ss_pred             CceeeEEeeccc-----------cCc--------------------------------eEEEEEecCCCEEEEEe-----
Q psy17610        241 ESQSLQCVLKEH-----------TSS--------------------------------VSVIQIKSDSKEAMSAS-----  272 (515)
Q Consensus       241 ~~~~~~~~~~~~-----------~~~--------------------------------v~~~~~~~~~~~l~~~~-----  272 (515)
                      .+......+...           ..+                                -..++++|+...+++..     
T Consensus       356 G~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~  435 (582)
T 1flg_A          356 GKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKE  435 (582)
T ss_dssp             CCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEE
T ss_pred             CCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcce
Confidence            433222111100           000                                01345666655555432     


Q ss_pred             ----------------------------CCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCC
Q psy17610        273 ----------------------------TDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETC  324 (515)
Q Consensus       273 ----------------------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~  324 (515)
                                                  .+|.|..||+.+++.+.......+...-.....+..++.++.|+.++.||.+
T Consensus       436 ~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~  515 (582)
T 1flg_A          436 DYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAK  515 (582)
T ss_dssp             EEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETT
T ss_pred             eeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEECC
Confidence                                        2578999999999988777665543332233356778889999999999999


Q ss_pred             CCceEEEEecCCCccEEEEEEcCCCCEEE
Q psy17610        325 DGSIIRSLEGSDVAAVNCVDFVDDGKYFL  353 (515)
Q Consensus       325 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~  353 (515)
                      +++.+.++.........-+.+..+|+.++
T Consensus       516 tG~~lW~~~~~~g~~a~P~~y~~~G~qYv  544 (582)
T 1flg_A          516 SGKELWKFQTGSGIVSPPITWEQDGEQYL  544 (582)
T ss_dssp             TCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred             CCCEEEEecCCCCcccCceEEEECCEEEE
Confidence            99999999876422222356666776443

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=99.22  E-value=1.2e-08  Score=86.57  Aligned_cols=207  Identities=9%  Similarity=0.005  Sum_probs=141.5

Q ss_pred             ceEEEecCCCCCCeEEEEEcCCCCEEEEecC--CCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEE-eCCC
Q psy17610        199 KLKFIIPNAHNRGVTALAITQDGTRLLSGGG--EGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSA-STDG  275 (515)
Q Consensus       199 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~  275 (515)
                      +.+.+++.+.......+.|++++...++.+.  ++.|.++|+.+.+......+..+ .....+++.  ++.++.+ -.++
T Consensus        10 ~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~-~fgeGi~~~--g~~lyv~t~~~~   86 (266)
T 2iwa_A           10 EVLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDS-YFGEGLTLL--NEKLYQVVWLKN   86 (266)
T ss_dssp             EEEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTT-CCEEEEEEE--TTEEEEEETTCS
T ss_pred             eEEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCC-cceEEEEEe--CCEEEEEEecCC
Confidence            4455663333344689999998754444432  57999999965443322222222 122345554  4455544 4578


Q ss_pred             cEEEEEcccceEEEEEEcC-ccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCC----ccEEEEEEcCCCC
Q psy17610        276 TCVLWDLIKSTRLIIMILP-SMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDV----AAVNCVDFVDDGK  350 (515)
Q Consensus       276 ~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~----~~i~~~~~~~~~~  350 (515)
                      .+.++|..+.+.+..+... ..  ...++++++.++++..++.+.++|..+.+.+..+.....    ..++.+.+. +|.
T Consensus        87 ~v~viD~~t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~  163 (266)
T 2iwa_A           87 IGFIYDRRTLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGE  163 (266)
T ss_dssp             EEEEEETTTTEEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE
T ss_pred             EEEEEECCCCcEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCE
Confidence            9999999999999888765 32  344666888888877889999999999999888875321    236778888 776


Q ss_pred             EEEEEcCCCeEEEEEccCCeeeeeccCC-------------CCCeeEEEECCCCcEEE-EEeCCCcEEEEeCCCC
Q psy17610        351 YFLTGGADQIVKMWMYREGVPCFVGIGH-------------AASITKIKISPDKKVIV-SVSADGGIFLWTFPEL  411 (515)
Q Consensus       351 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~-------------~~~i~~~~~~~~~~~l~-~~~~dg~i~iw~~~~~  411 (515)
                      .++....++.|.+.|..+++.+..+.-.             ......++|+|+++.|+ ++...+.+...++...
T Consensus       164 lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~  238 (266)
T 2iwa_A          164 VWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV  238 (266)
T ss_dssp             EEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred             EEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence            6666666889999999999887776421             13568999999986555 5556778888887653

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=99.17  E-value=3.3e-08  Score=88.68  Aligned_cols=237  Identities=10%  Similarity=0.091  Sum_probs=147.9

Q ss_pred             CcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeecc------------------CccCeEEEEeCC-CCcEEEEE
Q psy17610         82 SGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTC------------------HTSAIYDLQFPV-NFSSVFAT  142 (515)
Q Consensus        82 ~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~------------------h~~~v~~~~~~~-~~~~l~~~  142 (515)
                      ....++++++++++++++..++.|..|+..++.........                  ....+..+++.+ ++ .|+++
T Consensus        19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g-~l~v~   97 (322)
T 2fp8_A           19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNN-QLYIV   97 (322)
T ss_dssp             SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTT-EEEEE
T ss_pred             CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCC-cEEEE
Confidence            45677889999997888888999999998874322211100                  123578999998 55 56666


Q ss_pred             ecCCcEEEEeCCCCceeEEEEe--c---CeEEEEEEEee-CCCEEEEEeC-----------------CCeEEEEecCCCc
Q psy17610        143 CSKNDIRIWSVRTLNELLRISV--M---NMICACIVFTY-DGKAILSGWN-----------------DGFIRCFTPQSGK  199 (515)
Q Consensus       143 ~~d~~i~iw~~~~~~~~~~~~~--~---~~~v~~~~~~~-~~~~l~~~~~-----------------dg~i~~~~~~~~~  199 (515)
                      ...+.+..+|..+++ +..+..  .   ......+++.+ +|+..++-..                 ++.|..+|..+++
T Consensus        98 d~~~~i~~~d~~~g~-~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~  176 (322)
T 2fp8_A           98 DCYYHLSVVGSEGGH-ATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKE  176 (322)
T ss_dssp             ETTTEEEEECTTCEE-CEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTE
T ss_pred             ECCCCEEEEeCCCCE-EEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCE
Confidence            555668888877553 222221  1   12357799999 8876665432                 3678889987776


Q ss_pred             eEEEecCCCCCCeEEEEEcCCCCEEEEe-cCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeC-----
Q psy17610        200 LKFIIPNAHNRGVTALAITQDGTRLLSG-GGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST-----  273 (515)
Q Consensus       200 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----  273 (515)
                      .....  ........++++|+++.|..+ ..++.|..|++..........+....+ ...+++.++|++.++...     
T Consensus       177 ~~~~~--~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~  253 (322)
T 2fp8_A          177 TTLLL--KELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGN  253 (322)
T ss_dssp             EEEEE--EEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSS
T ss_pred             EEEec--cCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCccccc
Confidence            54322  112334678999999866655 556889999986421111111111123 678899999987666544     


Q ss_pred             -----CCcEEEEEcccceEEEEEEcCc-----cEEEEEEcCCCcEEEEEECCCeEEEEeCCC
Q psy17610        274 -----DGTCVLWDLIKSTRLIIMILPS-----MIMSAAYHPSEVQLITCSTNKMIDYWETCD  325 (515)
Q Consensus       274 -----d~~i~iwd~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~  325 (515)
                           .+.|..+|. .++.+..+..+.     .+..+++ .++..+++...++.|..+++..
T Consensus       254 ~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~  313 (322)
T 2fp8_A          254 MHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK  313 (322)
T ss_dssp             TTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred             ccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence                 456888886 466666665442     3455555 3555555555677788887643

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=99.16  E-value=3.5e-07  Score=81.25  Aligned_cols=228  Identities=9%  Similarity=-0.001  Sum_probs=144.6

Q ss_pred             CceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECC--CeEEEEeCCCCceEEE
Q psy17610        254 SSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTN--KMIDYWETCDGSIIRS  331 (515)
Q Consensus       254 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~i~~~d~~~~~~~~~  331 (515)
                      .....++++++++.+++-..++.|..+|... ...........+..+++.++++.+++....  ..+..+|..+++....
T Consensus        32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~  110 (306)
T 2p4o_A           32 TFLENLASAPDGTIFVTNHEVGEIVSITPDG-NQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETL  110 (306)
T ss_dssp             CCEEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred             CCcceEEECCCCCEEEEeCCCCeEEEECCCC-ceEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEE
Confidence            4567899999988766666788999999865 444455566778999999999966655443  2577788878776543


Q ss_pred             EecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCee-eee---------ccCCCCCeeEEEECCCCcEEEEEe-CC
Q psy17610        332 LEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVP-CFV---------GIGHAASITKIKISPDKKVIVSVS-AD  400 (515)
Q Consensus       332 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-~~~---------~~~~~~~i~~~~~~~~~~~l~~~~-~d  400 (515)
                      ...........++..+++..+++-..++.|.++|..+++. +..         ....-.....+  +|+++.|+.+. ..
T Consensus       111 ~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~  188 (306)
T 2p4o_A          111 LTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEK  188 (306)
T ss_dssp             EECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTT
T ss_pred             EeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCC
Confidence            3332223345556566665566555688999999865421 110         01111234455  78887665554 56


Q ss_pred             CcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeee--e
Q psy17610        401 GGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIR--S  478 (515)
Q Consensus       401 g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~--~  478 (515)
                      +.|..+++.... ......    ..           ..  ......++++++|++.++....+.|.++|.. |+...  .
T Consensus       189 ~~I~~~~~~~~g-~~~~~~----~~-----------~~--~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~  249 (306)
T 2p4o_A          189 MLLLRIPVDSTD-KPGEPE----IF-----------VE--QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQ  249 (306)
T ss_dssp             TEEEEEEBCTTS-CBCCCE----EE-----------EE--SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEEC
T ss_pred             CEEEEEEeCCCC-CCCccE----EE-----------ec--cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEee
Confidence            789999986421 000000    00           00  0235678999999887777778899999974 66532  3


Q ss_pred             ecccccceEEEEEEc---CCCcEEEEeec
Q psy17610        479 LEGSDVAAVNCVDFV---DDGKYFLTGGA  504 (515)
Q Consensus       479 ~~~~~~~~v~~~~~s---~~~~~l~s~~~  504 (515)
                      +...- ...++++|.   ||++.|..++.
T Consensus       250 ~~~~~-~~p~~~a~~g~~~d~~~LyVt~~  277 (306)
T 2p4o_A          250 AEQGV-IGSTAVAFGQTEGDCTAIYVVTN  277 (306)
T ss_dssp             GGGTC-TTEEEEEECCSTTTTTEEEEEEC
T ss_pred             ccccc-CCceEEEEecccCCCCEEEEECC
Confidence            33322 568899998   89777666544

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=99.16  E-value=5.5e-08  Score=81.37  Aligned_cols=193  Identities=11%  Similarity=0.050  Sum_probs=132.2

Q ss_pred             EEEEEecCCCcE--EEEEEecCCCEEEEEecCc--eEEEEECCCCceeEEeeccCccCeE--EEEeCCCCcEEEEEec-C
Q psy17610         73 TALYLLKDDSGI--SSLQYNPVNNKVFVGTVNC--EIFLIDMNSGFTLTLVNTCHTSAIY--DLQFPVNFSSVFATCS-K  145 (515)
Q Consensus        73 ~~~~~~~~~~~v--~~~~~s~~~~~l~~~~~d~--~i~iw~~~~~~~~~~~~~~h~~~v~--~~~~~~~~~~l~~~~~-d  145 (515)
                      +.+...+|+..-  ..+.|+ ++.++.+.+.+|  .|+++|+++++.+.....+  ....  .+++  ++..|..+.. +
T Consensus        32 ~vv~~~phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~--~~~FgeGit~--~g~~ly~ltw~~  106 (262)
T 3nol_A           32 QIVHSYPHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG--KRYFGEGISD--WKDKIVGLTWKN  106 (262)
T ss_dssp             EEEEEEECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC--TTCCEEEEEE--ETTEEEEEESSS
T ss_pred             EEEEEecCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecC--CccceeEEEE--eCCEEEEEEeeC
Confidence            445556776554  789998 666566666655  8999999998766655432  2332  3444  3446666554 8


Q ss_pred             CcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCC-C---CCeEEEEEcCCC
Q psy17610        146 NDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAH-N---RGVTALAITQDG  221 (515)
Q Consensus       146 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~-~---~~v~~~~~~~~~  221 (515)
                      +.+.++|.++.+.+.++......   ..++++++.|+....++.|.++|.++.+....+.... .   ..++.+.|. +|
T Consensus       107 ~~v~v~D~~t~~~~~ti~~~~eG---~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G  182 (262)
T 3nol_A          107 GLGFVWNIRNLRQVRSFNYDGEG---WGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DG  182 (262)
T ss_dssp             SEEEEEETTTCCEEEEEECSSCC---CCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TT
T ss_pred             CEEEEEECccCcEEEEEECCCCc---eEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CC
Confidence            89999999999999998864432   3455788888877778899999999999888775321 1   335667776 67


Q ss_pred             CEEEEecCCCcEEEEEccCCceeeEEeeccc----------cCceEEEEEecCCCEEEEEeCC
Q psy17610        222 TRLLSGGGEGQVRIWKLTRESQSLQCVLKEH----------TSSVSVIQIKSDSKEAMSASTD  274 (515)
Q Consensus       222 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~----------~~~v~~~~~~~~~~~l~~~~~d  274 (515)
                      +..+..-.+..|.+.|..+........+.+-          ....+.|+++|+++.|+..+..
T Consensus       183 ~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~  245 (262)
T 3nol_A          183 EIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL  245 (262)
T ss_dssp             EEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred             EEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence            6665555678899999854433222222211          1345899999999988888764

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=99.12  E-value=9e-06  Score=79.19  Aligned_cols=402  Identities=8%  Similarity=-0.048  Sum_probs=226.4

Q ss_pred             CcEEEEEEecCCCEEEEEe-cCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec-CCcEEEEeCCCCcee
Q psy17610         82 SGISSLQYNPVNNKVFVGT-VNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS-KNDIRIWSVRTLNEL  159 (515)
Q Consensus        82 ~~v~~~~~s~~~~~l~~~~-~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~~  159 (515)
                      ..+..++|++.+..|..+. .++.|..++++.. ....+..........+++.+.+..|+.+.. .+.|.+.+++.....
T Consensus        37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~-~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~  115 (628)
T 4a0p_A           37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGS-ALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQ  115 (628)
T ss_dssp             SCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCE
T ss_pred             CceEEEEEECCCCEEEEEECCCCeEEEEECCCC-CcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEE
Confidence            4678999999766666554 5689999998763 333333323345778999877667766655 678999998754332


Q ss_pred             EEEEecCeEEEEEEEeeCCCEEEEEeC--CCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEe-cCCCcEEEE
Q psy17610        160 LRISVMNMICACIVFTYDGKAILSGWN--DGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSG-GGEGQVRIW  236 (515)
Q Consensus       160 ~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iw  236 (515)
                      ..+...-.....+++.|....|+....  .+.|...+++........  ..-.....++++++++.|..+ ...+.|..+
T Consensus       116 ~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~--~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~  193 (628)
T 4a0p_A          116 VLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLV--PNVGRANGLTIDYAKRRLYWTDLDTNLIESS  193 (628)
T ss_dssp             EEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE--CSCSSEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred             EEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEE--CCCCCcceEEEccccCEEEEEECCCCEEEEE
Confidence            222233345688999986666666542  567888888765544333  244567899999976666655 456789999


Q ss_pred             EccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC-c--------------------
Q psy17610        237 KLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP-S--------------------  295 (515)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~--------------------  295 (515)
                      +++.....   .+.........+++.. +..+++-...+.|...|..+++....+... .                    
T Consensus       194 d~dG~~~~---v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~~~~l~~~~~~p~~i~v~~~~~q~~~n~C~  269 (628)
T 4a0p_A          194 NMLGLNRE---VIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYVMDILVFHSSRQSGWNECA  269 (628)
T ss_dssp             ETTSCSCE---EEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEEECSCCSCCEEEEECGGGSCCCCTTT
T ss_pred             cCCCCceE---EeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCCceEEEecCCCCcceeeeeeecccccceEec
Confidence            98643332   2222333445677754 344444444677888886555432222110 0                    


Q ss_pred             ----cEEEEEE-----------------cCCC-------cEEEEEECCCeEEEEeCCCCce-EEEEecCCCccEEEEEEc
Q psy17610        296 ----MIMSAAY-----------------HPSE-------VQLITCSTNKMIDYWETCDGSI-IRSLEGSDVAAVNCVDFV  346 (515)
Q Consensus       296 ----~~~~~~~-----------------~~~~-------~~l~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~i~~~~~~  346 (515)
                          ....++.                 .+++       .+++.+ ....|+-..+..... ...+.......+..++|.
T Consensus       270 ~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~Ll~s-~~~~i~~i~l~~~~~~~~~l~~~~~~~~~~ld~d  348 (628)
T 4a0p_A          270 SSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFS-QKSAINRMVIDEQQSPDIILPIHSLRNVRAIDYD  348 (628)
T ss_dssp             TTGGGCSSEEEEETTTEEEEECSTTCEECTTSSCEECCSSEEEEE-ETTEEEEECCCTTCCCCEECCCTTCSCEEEEEEE
T ss_pred             cCCCCcchhhhcCCCCCeeEEcCCCcEecccCCcCccccceeeee-ccceEEEEecccccCceEEEEehhcCCceEEEEe
Confidence                0000111                 1111       112222 223344443332211 111222222457788998


Q ss_pred             CCCCEEEEE-cCCCeEEEEEccCCeeeeeccC------CCCCeeEEEECCCCcEEE-EEeCCCcEEEEeCCCCcCccCCC
Q psy17610        347 DDGKYFLTG-GADQIVKMWMYREGVPCFVGIG------HAASITKIKISPDKKVIV-SVSADGGIFLWTFPELEDDVGDS  418 (515)
Q Consensus       347 ~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~------~~~~i~~~~~~~~~~~l~-~~~~dg~i~iw~~~~~~~~~~~~  418 (515)
                      +.+..|+.. ...+.|+.++.........+..      ....+..+++.+.++.|. +-+..+.|.+.++.....     
T Consensus       349 ~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~G~~~-----  423 (628)
T 4a0p_A          349 PLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSV-----  423 (628)
T ss_dssp             TTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCEE-----
T ss_pred             cCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECCCCeE-----
Confidence            865555544 4567888888754332222222      234678999998766555 555677888887753210     


Q ss_pred             cccceeeecccccccceeeecCcccEEEeeeccCCcEEEEee-cCC--eEEEEecCCCeeeeeecccccceEEEEEEcCC
Q psy17610        419 RSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCS-TNK--MIDYWETCDGSIIRSLEGSDVAAVNCVDFVDD  495 (515)
Q Consensus       419 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg--~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~  495 (515)
                                     .......-.....+++.|...+|.... ...  .|...++. |.....+........+.|++.++
T Consensus       424 ---------------~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~d-G~~~~~l~~~~l~~P~gla~D~~  487 (628)
T 4a0p_A          424 ---------------GVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALD-GTEREVLFFSGLSKPIALALDSR  487 (628)
T ss_dssp             ---------------EEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETT-SCSCEEEECSSCSCEEEEEEETT
T ss_pred             ---------------EEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCC-CCCcEEEEeccCCCccEEEEeCC
Confidence                           001111123478899999544444333 222  56666664 44343333322356789999998


Q ss_pred             CcEEEEeec-CCeEEEEE
Q psy17610        496 GKYFLTGGA-DQIVKICL  512 (515)
Q Consensus       496 ~~~l~s~~~-dg~v~iw~  512 (515)
                      ++.|..+.. .+.|...+
T Consensus       488 ~~~LYw~D~~~~~I~~~~  505 (628)
T 4a0p_A          488 LGKLFWADSDLRRIESSD  505 (628)
T ss_dssp             TTEEEEEETTTTEEEEEE
T ss_pred             CCEEEEEeCCCCEEEEEe
Confidence            776666544 45565544

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=99.10  E-value=4.3e-07  Score=81.40  Aligned_cols=237  Identities=10%  Similarity=0.081  Sum_probs=151.5

Q ss_pred             cCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEec--------------------CeEEEEEEEeeCCCEEEEE
Q psy17610        125 SAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVM--------------------NMICACIVFTYDGKAILSG  184 (515)
Q Consensus       125 ~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~--------------------~~~v~~~~~~~~~~~l~~~  184 (515)
                      ....+++|++++..+++...++.|..|+..+++. ..+...                    ......+++.++...|+++
T Consensus        19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~   97 (322)
T 2fp8_A           19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGF-VDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIV   97 (322)
T ss_dssp             SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCE-EEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEE
T ss_pred             CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCce-EEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEE
Confidence            3457789999988788888889999999876543 333211                    1246789999733356666


Q ss_pred             eCCCeEEEEecCCCceEEEec--CC-CCCCeEEEEEcC-CCCEEEEecC-----------------CCcEEEEEccCCce
Q psy17610        185 WNDGFIRCFTPQSGKLKFIIP--NA-HNRGVTALAITQ-DGTRLLSGGG-----------------EGQVRIWKLTRESQ  243 (515)
Q Consensus       185 ~~dg~i~~~~~~~~~~~~~~~--~~-~~~~v~~~~~~~-~~~~l~~~~~-----------------d~~i~iw~~~~~~~  243 (515)
                      ...+.+..+|..+++......  .+ .......+++.+ +|+..++-..                 ++.|..+|......
T Consensus        98 d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~  177 (322)
T 2fp8_A           98 DCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKET  177 (322)
T ss_dssp             ETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEE
T ss_pred             ECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEE
Confidence            555668889987664322111  11 123478899999 9987665432                 36678888643322


Q ss_pred             eeEEeeccccCceEEEEEecCCCEEEEE-eCCCcEEEEEcccc---eEEEEEEcCccEEEEEEcCCCcEEEEEEC-----
Q psy17610        244 SLQCVLKEHTSSVSVIQIKSDSKEAMSA-STDGTCVLWDLIKS---TRLIIMILPSMIMSAAYHPSEVQLITCST-----  314 (515)
Q Consensus       244 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----  314 (515)
                      ..   +.........++++++++.++.+ ...+.|..+++...   ........+. ...+++.++|++.++...     
T Consensus       178 ~~---~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~  253 (322)
T 2fp8_A          178 TL---LLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGN  253 (322)
T ss_dssp             EE---EEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSS
T ss_pred             EE---eccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCccccc
Confidence            11   11122345679999999866655 45688999998742   2211112334 788999999987776654     


Q ss_pred             -----CCeEEEEeCCCCceEEEEecCC---CccEEEEEEcCCCCEEEEEcCCCeEEEEEccC
Q psy17610        315 -----NKMIDYWETCDGSIIRSLEGSD---VAAVNCVDFVDDGKYFLTGGADQIVKMWMYRE  368 (515)
Q Consensus       315 -----~~~i~~~d~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~  368 (515)
                           .+.|..+|. .++.+..+....   ...+..+++ .+++++++...++.|..+++..
T Consensus       254 ~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~  313 (322)
T 2fp8_A          254 MHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK  313 (322)
T ss_dssp             TTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred             ccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence                 467888887 577777776543   234566666 4666666666778899998754

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=99.10  E-value=1.1e-05  Score=78.52  Aligned_cols=399  Identities=10%  Similarity=0.010  Sum_probs=217.4

Q ss_pred             CcEEEEEEecCCCEEEEEe-cCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec--CCcEEEEeCCCCce
Q psy17610         82 SGISSLQYNPVNNKVFVGT-VNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS--KNDIRIWSVRTLNE  158 (515)
Q Consensus        82 ~~v~~~~~s~~~~~l~~~~-~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~--d~~i~iw~~~~~~~  158 (515)
                      .....+|+++.++.|+.+. ..+.|.+.+++... ...+....-.....+++.|....|+.+..  .+.|...+++... 
T Consensus        80 ~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~-~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~-  157 (628)
T 4a0p_A           80 DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQH-RQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE-  157 (628)
T ss_dssp             SCCCEEEEETTTTEEEEEETTTTEEEEEETTSTT-CEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-
T ss_pred             CCcceEEEEeCCCEEEEEECCCCEEEEEecCCCc-EEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc-
Confidence            3566889998666565544 46789999998643 33333234455789999996667777663  4677777776443 


Q ss_pred             eEEEEecCeEEEEEEEeeCCCEEEEEe-CCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEE
Q psy17610        159 LLRISVMNMICACIVFTYDGKAILSGW-NDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWK  237 (515)
Q Consensus       159 ~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~  237 (515)
                      ...+...-.....++++++++.|..+. ..+.|..+++...... .+ .........+++.. +..+++-...+.|...|
T Consensus       158 ~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~-v~-~~~l~~P~glav~~-~~ly~tD~~~~~I~~~d  234 (628)
T 4a0p_A          158 RTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNRE-VI-ADDLPHPFGLTQYQ-DYIYWTDWSRRSIERAN  234 (628)
T ss_dssp             CEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-EE-EECCSCEEEEEEET-TEEEEEETTTTEEEEEE
T ss_pred             eEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceE-Ee-eccCCCceEEEEEC-CEEEEecCCCCEEEEEE
Confidence            333333344568899999877777665 4578999998765442 22 22233456777764 44444555567788777


Q ss_pred             ccCCceee-E----------Eeeccc-----------cCceEEEEEe-c----------------CC-------CEEEEE
Q psy17610        238 LTRESQSL-Q----------CVLKEH-----------TSSVSVIQIK-S----------------DS-------KEAMSA  271 (515)
Q Consensus       238 ~~~~~~~~-~----------~~~~~~-----------~~~v~~~~~~-~----------------~~-------~~l~~~  271 (515)
                      ..++.... +          ..+...           .+....++.. |                ++       .+++.+
T Consensus       235 k~tg~~~~~l~~~~~~p~~i~v~~~~~q~~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~Ll~s  314 (628)
T 4a0p_A          235 KTSGQNRTIIQGHLDYVMDILVFHSSRQSGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFS  314 (628)
T ss_dssp             TTTCCSCEEEECSCCSCCEEEEECGGGSCCCCTTTTTGGGCSSEEEEETTTEEEEECSTTCEECTTSSCEECCSSEEEEE
T ss_pred             CCCCCceEEEecCCCCcceeeeeeecccccceEeccCCCCcchhhhcCCCCCeeEEcCCCcEecccCCcCccccceeeee
Confidence            53222110 0          000000           0011112221 1                11       112211


Q ss_pred             eCCCcEEEEEcccceE-EEEEE--cCccEEEEEEcCCCcEEEEEEC-CCeEEEEeCCCCceEEEEec-----CCCccEEE
Q psy17610        272 STDGTCVLWDLIKSTR-LIIMI--LPSMIMSAAYHPSEVQLITCST-NKMIDYWETCDGSIIRSLEG-----SDVAAVNC  342 (515)
Q Consensus       272 ~~d~~i~iwd~~~~~~-~~~~~--~~~~~~~~~~~~~~~~l~~~~~-~~~i~~~d~~~~~~~~~~~~-----~~~~~i~~  342 (515)
                      . ...|+-..+..... ...+.  .-..+..++|.+.+..++.+.. .+.|+.++.........+..     .....+..
T Consensus       315 ~-~~~i~~i~l~~~~~~~~~l~~~~~~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~g  393 (628)
T 4a0p_A          315 Q-KSAINRMVIDEQQSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYD  393 (628)
T ss_dssp             E-TTEEEEECCCTTCCCCEECCCTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEE
T ss_pred             c-cceEEEEecccccCceEEEEehhcCCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcce
Confidence            1 22333333322111 01111  1134778899887777666654 67788887754433222322     11246789


Q ss_pred             EEEcCCCC-EEEEEcCCCeEEEEEccCCeeeeec-cCCCCCeeEEEECCCCcEEEEEeC-CC--cEEEEeCCCCcCccCC
Q psy17610        343 VDFVDDGK-YFLTGGADQIVKMWMYREGVPCFVG-IGHAASITKIKISPDKKVIVSVSA-DG--GIFLWTFPELEDDVGD  417 (515)
Q Consensus       343 ~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~-dg--~i~iw~~~~~~~~~~~  417 (515)
                      +++...++ ++++-+..+.|.+.++.. +....+ ........+|++.|...+|+.... ..  .|...++.....    
T Consensus       394 lAvD~~~~nLY~td~~~~~I~v~~~~G-~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~----  468 (628)
T 4a0p_A          394 LSIDIYSRYIYWTCEATNVINVTRLDG-RSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTER----  468 (628)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEETTS-CEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSC----
T ss_pred             EEeeccCCeEEEEcCCCCEEEEEECCC-CeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCc----
Confidence            99998755 445666778999999854 433333 334466899999994444444433 22  344444432211    


Q ss_pred             CcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeec-CCeEEEEecCCCeeeeeecccccceEEEEEEcCCC
Q psy17610        418 SRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCST-NKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDG  496 (515)
Q Consensus       418 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~  496 (515)
                                      .......-...+.+++.++++.|..+.. .+.|...++. |+....+.........++++.. +
T Consensus       469 ----------------~~l~~~~l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~d-G~~r~~~~~~~~~~P~glav~~-~  530 (628)
T 4a0p_A          469 ----------------EVLFFSGLSKPIALALDSRLGKLFWADSDLRRIESSDLS-GANRIVLEDSNILQPVGLTVFE-N  530 (628)
T ss_dssp             ----------------EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCSCEEEECSSCSCEEEEEEET-T
T ss_pred             ----------------EEEEeccCCCccEEEEeCCCCEEEEEeCCCCEEEEEeCC-CCceEEEEcCCCCCcEEEEEEC-C
Confidence                            0001111234688999998877776654 5789999984 4444444322224556777654 3


Q ss_pred             cEEEEeecCCeEE
Q psy17610        497 KYFLTGGADQIVK  509 (515)
Q Consensus       497 ~~l~s~~~dg~v~  509 (515)
                      ....+=...+.|.
T Consensus       531 ~ly~tD~~~~~i~  543 (628)
T 4a0p_A          531 WLYWIDKQQQMIE  543 (628)
T ss_dssp             EEEEEETTTTEEE
T ss_pred             EEEEEECCCCeEE
Confidence            3333333334443

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=99.08  E-value=7e-08  Score=80.77  Aligned_cols=194  Identities=10%  Similarity=0.079  Sum_probs=131.9

Q ss_pred             eEEEecCCCCCCeEEEEEcCCCCEEEEecCCC--cEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEe-CCCc
Q psy17610        200 LKFIIPNAHNRGVTALAITQDGTRLLSGGGEG--QVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAS-TDGT  276 (515)
Q Consensus       200 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~  276 (515)
                      .+.+++.....-...+.|+ ++.++.+.+.+|  .|+.+|+.+.+.  .....-. .........++++.++... .++.
T Consensus        33 vv~~~phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv--~~~~~l~-~~~FgeGit~~g~~ly~ltw~~~~  108 (262)
T 3nol_A           33 IVHSYPHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKT--LQQIELG-KRYFGEGISDWKDKIVGLTWKNGL  108 (262)
T ss_dssp             EEEEEECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCE--EEEEECC-TTCCEEEEEEETTEEEEEESSSSE
T ss_pred             EEEEecCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcE--EEEEecC-CccceeEEEEeCCEEEEEEeeCCE
Confidence            4555533333345788998 666666666655  899999965443  3333222 2222222333455555544 5789


Q ss_pred             EEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCC----CccEEEEEEcCCCCEE
Q psy17610        277 CVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSD----VAAVNCVDFVDDGKYF  352 (515)
Q Consensus       277 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~l  352 (515)
                      +.++|..+.+.+..+..+..-.  .+.++++.|+.+...+.|.++|..+.+.+..+....    ...++.+.+. +|+..
T Consensus       109 v~v~D~~t~~~~~ti~~~~eG~--glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~ly  185 (262)
T 3nol_A          109 GFVWNIRNLRQVRSFNYDGEGW--GLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIF  185 (262)
T ss_dssp             EEEEETTTCCEEEEEECSSCCC--CEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEE
T ss_pred             EEEEECccCcEEEEEECCCCce--EEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEE
Confidence            9999999999999998766433  344677888877778899999999999998877532    1334567776 77766


Q ss_pred             EEEcCCCeEEEEEccCCeeeeeccCC------------CCCeeEEEECCCCcEEEEEeCC
Q psy17610        353 LTGGADQIVKMWMYREGVPCFVGIGH------------AASITKIKISPDKKVIVSVSAD  400 (515)
Q Consensus       353 ~~~~~dg~i~i~d~~~~~~~~~~~~~------------~~~i~~~~~~~~~~~l~~~~~d  400 (515)
                      +..-.++.|.+.|.++++.+..+.-.            ....+.|||+|+++.|+..+..
T Consensus       186 an~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~  245 (262)
T 3nol_A          186 ANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL  245 (262)
T ss_dssp             EEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred             EEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence            66667889999999999887665321            2356889999988877777653

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=99.05  E-value=1.2e-07  Score=79.31  Aligned_cols=193  Identities=14%  Similarity=0.078  Sum_probs=132.4

Q ss_pred             ceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEE-EEeCCCcE
Q psy17610        199 KLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAM-SASTDGTC  277 (515)
Q Consensus       199 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i  277 (515)
                      +.+.+++.....-...+.|+ ++.+..+.+.+|.|+.+|+.+.+..... +... ..-..+++  +++.++ ..-.++.+
T Consensus        44 ~Vv~~~phd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~-~FgeGit~--~g~~Ly~ltw~~~~v  118 (268)
T 3nok_A           44 HIIREYPHATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGN-IFAEGLAS--DGERLYQLTWTEGLL  118 (268)
T ss_dssp             EEEEEEECCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTT-CCEEEEEE--CSSCEEEEESSSCEE
T ss_pred             EEEEEEcCCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCC-cceeEEEE--eCCEEEEEEccCCEE
Confidence            34555543334445788887 4566677788889999999655433332 3221 11123444  444444 44467899


Q ss_pred             EEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCC----ccEEEEEEcCCCCEEE
Q psy17610        278 VLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDV----AAVNCVDFVDDGKYFL  353 (515)
Q Consensus       278 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~----~~i~~~~~~~~~~~l~  353 (515)
                      .++|..+.+.+..+..+..-..++  ++++.|+.+..++.|.++|..+.+.+.++.....    ..++.+.|. +|+..+
T Consensus       119 ~V~D~~Tl~~~~ti~~~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lya  195 (268)
T 3nok_A          119 FTWSGMPPQRERTTRYSGEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYA  195 (268)
T ss_dssp             EEEETTTTEEEEEEECSSCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEE
T ss_pred             EEEECCcCcEEEEEeCCCceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEE
Confidence            999999999999998766544444  6688888888899999999999999988875321    245667776 777666


Q ss_pred             EEcCCCeEEEEEccCCeeeeeccCC-------------CCCeeEEEECCCCcEEEEEeC
Q psy17610        354 TGGADQIVKMWMYREGVPCFVGIGH-------------AASITKIKISPDKKVIVSVSA  399 (515)
Q Consensus       354 ~~~~dg~i~i~d~~~~~~~~~~~~~-------------~~~i~~~~~~~~~~~l~~~~~  399 (515)
                      ....++.|.+.|.++++.+..+.-.             ....+.||++|+++.|+..+.
T Consensus       196 nvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK  254 (268)
T 3nok_A          196 NIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK  254 (268)
T ss_dssp             EETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred             EECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence            6667889999999999887665321             235689999997766665543

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=99.03  E-value=6.1e-07  Score=74.47  Aligned_cols=194  Identities=11%  Similarity=0.015  Sum_probs=131.9

Q ss_pred             ceEEEecCCCCCCeEEEEEcCCCCEEEEecCC--CcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEE-EEeCCC
Q psy17610        199 KLKFIIPNAHNRGVTALAITQDGTRLLSGGGE--GQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAM-SASTDG  275 (515)
Q Consensus       199 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~  275 (515)
                      +.+.+++.....-...+.|++ +.+..+.+.+  ..|+.+|+.+.+......+..+. .-..+++  .++.++ ..-.++
T Consensus        10 ~v~~~~phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~-fgeGi~~--~~~~ly~ltw~~~   85 (243)
T 3mbr_X           10 RVVKRYPHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPY-FGAGIVA--WRDRLIQLTWRNH   85 (243)
T ss_dssp             EEEEEEECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTC-CEEEEEE--ETTEEEEEESSSS
T ss_pred             EEEEEcCCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCc-ceeEEEE--eCCEEEEEEeeCC
Confidence            345566444445577999986 5555555554  48999999654433333332221 1123343  344444 445678


Q ss_pred             cEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCC----ccEEEEEEcCCCCE
Q psy17610        276 TCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDV----AAVNCVDFVDDGKY  351 (515)
Q Consensus       276 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~----~~i~~~~~~~~~~~  351 (515)
                      .+.++|..+.+.+..+..+..-..++  +++..|+++..++.|.++|..+.+.+.++.....    ..++.+.+. +|+.
T Consensus        86 ~v~v~D~~tl~~~~ti~~~~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~l  162 (243)
T 3mbr_X           86 EGFVYDLATLTPRARFRYPGEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGEL  162 (243)
T ss_dssp             EEEEEETTTTEEEEEEECSSCCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEE
T ss_pred             EEEEEECCcCcEEEEEeCCCCceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEE
Confidence            99999999999999998876544444  5677888877899999999999999888875321    345666765 6776


Q ss_pred             EEEEcCCCeEEEEEccCCeeeeeccC-------------CCCCeeEEEECCCCcEEEEEeC
Q psy17610        352 FLTGGADQIVKMWMYREGVPCFVGIG-------------HAASITKIKISPDKKVIVSVSA  399 (515)
Q Consensus       352 l~~~~~dg~i~i~d~~~~~~~~~~~~-------------~~~~i~~~~~~~~~~~l~~~~~  399 (515)
                      ++....+..|.+.|.++++.+..+.-             .....+.|+++|+++.|+..+.
T Consensus       163 yanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK  223 (243)
T 3mbr_X          163 LANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK  223 (243)
T ss_dssp             EEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred             EEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence            66666688999999999988766531             1235688999998777766654

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=99.02  E-value=3.5e-08  Score=97.67  Aligned_cols=271  Identities=12%  Similarity=0.019  Sum_probs=155.9

Q ss_pred             EEEeCC-CCcEEEEEecCC-----------cEEEEeCCCCce--eEEEEe-cCeEEEEEEEeeCCCEEEEEeC-CCeEEE
Q psy17610        129 DLQFPV-NFSSVFATCSKN-----------DIRIWSVRTLNE--LLRISV-MNMICACIVFTYDGKAILSGWN-DGFIRC  192 (515)
Q Consensus       129 ~~~~~~-~~~~l~~~~~d~-----------~i~iw~~~~~~~--~~~~~~-~~~~v~~~~~~~~~~~l~~~~~-dg~i~~  192 (515)
                      +.++.| +++.++.++.+.           .+.+||..+++-  +..+.. +.....++++.++++.++.|+. +..+.+
T Consensus       190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~  269 (656)
T 1k3i_A          190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL  269 (656)
T ss_dssp             EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred             eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence            556667 777777776532           588999987653  223322 1222334677789998888884 458999


Q ss_pred             EecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEec-CC-----CcEEEEEccCCceeeEEee--ccccCceEEEEEecC
Q psy17610        193 FTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGG-GE-----GQVRIWKLTRESQSLQCVL--KEHTSSVSVIQIKSD  264 (515)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-----~~i~iw~~~~~~~~~~~~~--~~~~~~v~~~~~~~~  264 (515)
                      ||..+++....-.......-.+++..++++.++.|+ .+     ..+.+||..+.........  ......-....+..+
T Consensus       270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~  349 (656)
T 1k3i_A          270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSD  349 (656)
T ss_dssp             EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTT
T ss_pred             ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecC
Confidence            999887655432112222223556667899999988 34     5689999865544332100  000000000111234


Q ss_pred             CCEEEEEeCC---------CcEEEEEcccceEEEEEEcC----------ccEEEEEEc-CCCcEEEEEECCC--------
Q psy17610        265 SKEAMSASTD---------GTCVLWDLIKSTRLIIMILP----------SMIMSAAYH-PSEVQLITCSTNK--------  316 (515)
Q Consensus       265 ~~~l~~~~~d---------~~i~iwd~~~~~~~~~~~~~----------~~~~~~~~~-~~~~~l~~~~~~~--------  316 (515)
                      +..++.++.+         ..+..||..+..........          ..-.++.+. .+++.++.|+.++        
T Consensus       350 ~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~  429 (656)
T 1k3i_A          350 NHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATT  429 (656)
T ss_dssp             CSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCC
T ss_pred             CceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCC
Confidence            4444555444         35678888766543322211          112334443 3677777777432        


Q ss_pred             ---eEEEEeCCCCceEEEE--ecCCCccEEEEEEcCCCCEEEEEcCC-----------CeEEEEEccCCeeee--eccCC
Q psy17610        317 ---MIDYWETCDGSIIRSL--EGSDVAAVNCVDFVDDGKYFLTGGAD-----------QIVKMWMYREGVPCF--VGIGH  378 (515)
Q Consensus       317 ---~i~~~d~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~d-----------g~i~i~d~~~~~~~~--~~~~~  378 (515)
                         .+.+||..+.+-....  ..+....-.++...|++++++.|+.+           ..+.+||..+.+-..  .....
T Consensus       430 ~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~  509 (656)
T 1k3i_A          430 NAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIV  509 (656)
T ss_dssp             CEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSC
T ss_pred             cceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCc
Confidence               6788888776654433  22221223455677899999999854           468999997764322  12222


Q ss_pred             CCCeeEEEECCCCcEEEEEeC
Q psy17610        379 AASITKIKISPDKKVIVSVSA  399 (515)
Q Consensus       379 ~~~i~~~~~~~~~~~l~~~~~  399 (515)
                      ........+.|+++.++.|+.
T Consensus       510 R~~hs~a~ll~dg~v~v~GG~  530 (656)
T 1k3i_A          510 RVYHSISLLLPDGRVFNGGGG  530 (656)
T ss_dssp             CCTTEEEEECTTSCEEEEECC
T ss_pred             cccccHhhcCCCcEEEecCCC
Confidence            222334556799999999885

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=99.01  E-value=1.3e-06  Score=77.54  Aligned_cols=230  Identities=10%  Similarity=-0.009  Sum_probs=140.1

Q ss_pred             cCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCC--cEEEEeCCCC
Q psy17610         79 KDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKN--DIRIWSVRTL  156 (515)
Q Consensus        79 ~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~--~i~iw~~~~~  156 (515)
                      ........++++|+++++++-..++.|..||.++. .... .. .......+++.++|+.+++....+  .|..++..++
T Consensus        29 p~~~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~-~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g  105 (306)
T 2p4o_A           29 PVNTFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIH-AT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDG  105 (306)
T ss_dssp             CTTCCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEE-EE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTS
T ss_pred             CCCCCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEE-Ee-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCC
Confidence            33467889999999996666667899999998763 2222 22 234688999999998555443332  4666777777


Q ss_pred             ceeEEEEecC-eEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCce-EEEe--------cCCCCCCeEEEEEcCCCCEEEE
Q psy17610        157 NELLRISVMN-MICACIVFTYDGKAILSGWNDGFIRCFTPQSGKL-KFII--------PNAHNRGVTALAITQDGTRLLS  226 (515)
Q Consensus       157 ~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~-~~~~--------~~~~~~~v~~~~~~~~~~~l~~  226 (515)
                      +......... .....++..+++..+++-..++.|..+|..+++. +...        ....-...+.+  +++++.|+.
T Consensus       106 ~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv  183 (306)
T 2p4o_A          106 TVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYV  183 (306)
T ss_dssp             CEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEE
T ss_pred             eEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEE
Confidence            6543322111 1223444445544444444588999999876532 1111        00111234555  777776654


Q ss_pred             e-cCCCcEEEEEccCC-ceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEE--EEcC-ccEEEEE
Q psy17610        227 G-GGEGQVRIWKLTRE-SQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLII--MILP-SMIMSAA  301 (515)
Q Consensus       227 ~-~~d~~i~iw~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~--~~~~-~~~~~~~  301 (515)
                      + ...+.|..+++... .......+.. ......++++++|+++++....+.|.++|.. ++....  +..+ ....+++
T Consensus       184 ~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a  261 (306)
T 2p4o_A          184 SNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVA  261 (306)
T ss_dssp             EETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEE
T ss_pred             EeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEE
Confidence            4 55688999998631 1111111111 1345678899999877776667899999975 544322  2233 4588999


Q ss_pred             Ec---CCCcEEEEEECC
Q psy17610        302 YH---PSEVQLITCSTN  315 (515)
Q Consensus       302 ~~---~~~~~l~~~~~~  315 (515)
                      |.   |+++.|+++...
T Consensus       262 ~~g~~~d~~~LyVt~~~  278 (306)
T 2p4o_A          262 FGQTEGDCTAIYVVTNG  278 (306)
T ss_dssp             ECCSTTTTTEEEEEECT
T ss_pred             EecccCCCCEEEEECCC
Confidence            98   888877776654

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=99.00  E-value=4.2e-07  Score=76.06  Aligned_cols=193  Identities=7%  Similarity=-0.041  Sum_probs=130.8

Q ss_pred             EEEEEecCCCcE--EEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEe-cCCcEE
Q psy17610         73 TALYLLKDDSGI--SSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATC-SKNDIR  149 (515)
Q Consensus        73 ~~~~~~~~~~~v--~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-~d~~i~  149 (515)
                      +.+...+|+..-  ..+.|+ ++.+..+.+.+|.|+++|+++++.+...+. ..---..+++..  ..|..+. .++.+.
T Consensus        44 ~Vv~~~phd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~-~~~FgeGit~~g--~~Ly~ltw~~~~v~  119 (268)
T 3nok_A           44 HIIREYPHATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWMERL-GNIFAEGLASDG--ERLYQLTWTEGLLF  119 (268)
T ss_dssp             EEEEEEECCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEEEC-TTCCEEEEEECS--SCEEEEESSSCEEE
T ss_pred             EEEEEEcCCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEECC-CCcceeEEEEeC--CEEEEEEccCCEEE
Confidence            344555676544  788888 455566667778999999999877776632 211123355543  3454444 589999


Q ss_pred             EEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCC-C---CCeEEEEEcCCCCEEE
Q psy17610        150 IWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAH-N---RGVTALAITQDGTRLL  225 (515)
Q Consensus       150 iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~-~---~~v~~~~~~~~~~~l~  225 (515)
                      ++|.++++.+.++......   ..++++++.|+.+..++.|.++|.++.+....+.... .   ..++.+.|. +|+..+
T Consensus       120 V~D~~Tl~~~~ti~~~~eG---wGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lya  195 (268)
T 3nok_A          120 TWSGMPPQRERTTRYSGEG---WGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYA  195 (268)
T ss_dssp             EEETTTTEEEEEEECSSCC---CCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEE
T ss_pred             EEECCcCcEEEEEeCCCce---eEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEE
Confidence            9999999999999864432   3444788888888889999999999999888774322 1   245677877 676555


Q ss_pred             EecCCCcEEEEEccCCceeeEEeecc-----------ccCceEEEEEecCCCEEEEEeC
Q psy17610        226 SGGGEGQVRIWKLTRESQSLQCVLKE-----------HTSSVSVIQIKSDSKEAMSAST  273 (515)
Q Consensus       226 ~~~~d~~i~iw~~~~~~~~~~~~~~~-----------~~~~v~~~~~~~~~~~l~~~~~  273 (515)
                      ..-.+..|.+.|..+........+.+           .....+.|+++|+++.|+..+.
T Consensus       196 nvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK  254 (268)
T 3nok_A          196 NIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK  254 (268)
T ss_dssp             EETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred             EECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence            55567889999985443322222221           1135689999998888777765

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=98.97  E-value=8e-07  Score=82.65  Aligned_cols=236  Identities=11%  Similarity=0.096  Sum_probs=141.9

Q ss_pred             cEEEEEEec-CCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecC-C----cEEEEeCCCC
Q psy17610         83 GISSLQYNP-VNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSK-N----DIRIWSVRTL  156 (515)
Q Consensus        83 ~v~~~~~s~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d-~----~i~iw~~~~~  156 (515)
                      ....|+++| ++..|.++...+.|+.+|.+++ .+..+.. .......++|+++++.|+++... +    .+...+ ..+
T Consensus       138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~-~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~-~~g  214 (430)
T 3tc9_A          138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKE-YVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILT-RES  214 (430)
T ss_dssp             CCCEEEEETTEEEEEEEEEBTEEEEEEETTTT-EEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEE-GGG
T ss_pred             CCCEEEECCCCCCeEEEEeCCCcEEEEECCCC-EEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEe-CCC
Confidence            567899998 4666777766689999999874 4444433 44568899999999977777652 2    233333 333


Q ss_pred             cee--EEEEecCeEEEEEEEee-CCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEE-EEecCCCc
Q psy17610        157 NEL--LRISVMNMICACIVFTY-DGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRL-LSGGGEGQ  232 (515)
Q Consensus       157 ~~~--~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~  232 (515)
                      ...  ..+.. ......++++| ++..+++-...+.|..++..++........+.......++|+|+|++| ++-...+.
T Consensus       215 ~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~  293 (430)
T 3tc9_A          215 GFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHY  293 (430)
T ss_dssp             TSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTE
T ss_pred             ceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCE
Confidence            322  23332 22346788999 676666666778999999987765332222233457899999999954 44456788


Q ss_pred             EEEEEccCCceee--EEeeccc---------------cCceE-EEEEe--------cCCCEEEEEeCCCcEEEEEcccce
Q psy17610        233 VRIWKLTRESQSL--QCVLKEH---------------TSSVS-VIQIK--------SDSKEAMSASTDGTCVLWDLIKST  286 (515)
Q Consensus       233 i~iw~~~~~~~~~--~~~~~~~---------------~~~v~-~~~~~--------~~~~~l~~~~~d~~i~iwd~~~~~  286 (515)
                      |..++.+......  ...+.+.               -.... .++..        +++.++++-...+.|+.++. .+.
T Consensus       294 I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~-~G~  372 (430)
T 3tc9_A          294 ILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTP-QGR  372 (430)
T ss_dssp             EEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECT-TSE
T ss_pred             EEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECC-CCc
Confidence            9998875321111  1111110               01122 44443        23455555455677888873 454


Q ss_pred             EEEEEEc---------C---------ccEEEEEEcCC-CcEEEEEECCCeEEEEeC
Q psy17610        287 RLIIMIL---------P---------SMIMSAAYHPS-EVQLITCSTNKMIDYWET  323 (515)
Q Consensus       287 ~~~~~~~---------~---------~~~~~~~~~~~-~~~l~~~~~~~~i~~~d~  323 (515)
                      .......         .         .....+++.|+ +..+++-..+..|+.+++
T Consensus       373 v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~  428 (430)
T 3tc9_A          373 VTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGY  428 (430)
T ss_dssp             EEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred             EEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEcc
Confidence            4433322         1         14788899985 555555445667777664

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=98.97  E-value=1.9e-06  Score=71.51  Aligned_cols=195  Identities=10%  Similarity=0.012  Sum_probs=128.8

Q ss_pred             EEEEEecCCC--cEEEEEEecCCCEEEEEecC--ceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEe-cCCc
Q psy17610         73 TALYLLKDDS--GISSLQYNPVNNKVFVGTVN--CEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATC-SKND  147 (515)
Q Consensus        73 ~~~~~~~~~~--~v~~~~~s~~~~~l~~~~~d--~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-~d~~  147 (515)
                      +.+...+|+.  -...+.|++ +.++.+.+..  ..|+.+|+++++.+....-...---..+++.  +..|.... .++.
T Consensus        10 ~v~~~~phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~~   86 (243)
T 3mbr_X           10 RVVKRYPHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNHE   86 (243)
T ss_dssp             EEEEEEECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSE
T ss_pred             EEEEEcCCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCCE
Confidence            4445556764  466899986 4444554544  4899999999876665532221111334443  34555554 4899


Q ss_pred             EEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCC----CCeEEEEEcCCCCE
Q psy17610        148 IRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHN----RGVTALAITQDGTR  223 (515)
Q Consensus       148 i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~  223 (515)
                      +.++|.++.+.+.++......   ..+.++++.|+.+..++.|.++|.++.+....+.....    ..++.+.+. +|+.
T Consensus        87 v~v~D~~tl~~~~ti~~~~~G---wglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~l  162 (243)
T 3mbr_X           87 GFVYDLATLTPRARFRYPGEG---WALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGEL  162 (243)
T ss_dssp             EEEEETTTTEEEEEEECSSCC---CEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEE
T ss_pred             EEEEECCcCcEEEEEeCCCCc---eEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEE
Confidence            999999999999999865433   34456788888877889999999999998877743211    345667776 6665


Q ss_pred             EEEecCCCcEEEEEccCCceeeEEeecc-----------ccCceEEEEEecCCCEEEEEeCC
Q psy17610        224 LLSGGGEGQVRIWKLTRESQSLQCVLKE-----------HTSSVSVIQIKSDSKEAMSASTD  274 (515)
Q Consensus       224 l~~~~~d~~i~iw~~~~~~~~~~~~~~~-----------~~~~v~~~~~~~~~~~l~~~~~d  274 (515)
                      .+..-.+..|.+.|..+........+.+           .....+.|+++|+++.|+..+..
T Consensus       163 yanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~  224 (243)
T 3mbr_X          163 LANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR  224 (243)
T ss_dssp             EEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT
T ss_pred             EEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC
Confidence            5555567789999985443322222221           12356899999998888887763

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=98.96  E-value=1.1e-06  Score=81.75  Aligned_cols=254  Identities=8%  Similarity=-0.001  Sum_probs=145.4

Q ss_pred             ceEEEEEec-CCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECC-----CeEEEEeCCCCce
Q psy17610        255 SVSVIQIKS-DSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTN-----KMIDYWETCDGSI  328 (515)
Q Consensus       255 ~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~i~~~d~~~~~~  328 (515)
                      ....++++| ++..|+.+...+.|+.+|+..+..............++++++++.|+++...     ..+..++. .+..
T Consensus       138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~  216 (430)
T 3tc9_A          138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGF  216 (430)
T ss_dssp             CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTS
T ss_pred             CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCce
Confidence            457789998 4566666666588999999877665555555678999999999977766652     13444443 2222


Q ss_pred             E--EEEecCCCccEEEEEEcC-CCCEEEEEcCCCeEEEEEccCCeeeeec-cCCCCCeeEEEECCCCcEEEEE-eCCCcE
Q psy17610        329 I--RSLEGSDVAAVNCVDFVD-DGKYFLTGGADQIVKMWMYREGVPCFVG-IGHAASITKIKISPDKKVIVSV-SADGGI  403 (515)
Q Consensus       329 ~--~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~-~~dg~i  403 (515)
                      .  ..+..  ......++++| +|.++++-..++.|..++...+...... .+.......++|+|++++|+.+ ...+.|
T Consensus       217 ~~~~~l~~--~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I  294 (430)
T 3tc9_A          217 KVITELTK--GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYI  294 (430)
T ss_dssp             CSEEEEEE--CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEE
T ss_pred             eeeeeecc--CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEE
Confidence            1  22222  13456788999 7777777777889999999876542221 1222456789999999955555 456788


Q ss_pred             EEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEE-Eeeec--------cCCcEEEEeecCCeEEEEecCCCe
Q psy17610        404 FLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIM-SAAYH--------PSEVQLITCSTNKMIDYWETCDGS  474 (515)
Q Consensus       404 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~s--------~~~~~l~~~~~dg~v~iwd~~~~~  474 (515)
                      ..++.............+............. .....-.... .++..        ++|.+.++=...+.|+.++ .+|+
T Consensus       295 ~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~-~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~~G~  372 (430)
T 3tc9_A          295 LRSDYDWKTKRLTTPYIVCGQQGAKDWVDGV-GKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT-PQGR  372 (430)
T ss_dssp             EEEEEETTTTEECCCEEEEECTTCBCCBCEE-GGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-TTSE
T ss_pred             EEEeCCcccccccceEEEeccCCCCCCCCCC-CcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC-CCCc
Confidence            8887653211110000000000000000000 0000001122 34443        3455555555667888888 4565


Q ss_pred             eeeeecc----c----c--------cceEEEEEEcCC-CcEEEEeecCCeEEEEEE
Q psy17610        475 IIRSLEG----S----D--------VAAVNCVDFVDD-GKYFLTGGADQIVKICLY  513 (515)
Q Consensus       475 ~~~~~~~----~----~--------~~~v~~~~~s~~-~~~l~s~~~dg~v~iw~~  513 (515)
                      .......    .    .        ......++++|+ +.++++-..++.|+.++.
T Consensus       373 v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~  428 (430)
T 3tc9_A          373 VTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGY  428 (430)
T ss_dssp             EEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred             EEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEcc
Confidence            4433211    0    0        125789999994 666666556778887763

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=98.94  E-value=1.2e-07  Score=95.30  Aligned_cols=240  Identities=11%  Similarity=0.060  Sum_probs=134.7

Q ss_pred             cEEEEEEe-cCCCEEEEEecC-----ceEEEEECCCC-ceeEEeeccCccCeEEEEeCCCCcEEEEEecC-----CcEEE
Q psy17610         83 GISSLQYN-PVNNKVFVGTVN-----CEIFLIDMNSG-FTLTLVNTCHTSAIYDLQFPVNFSSVFATCSK-----NDIRI  150 (515)
Q Consensus        83 ~v~~~~~s-~~~~~l~~~~~d-----~~i~iw~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d-----~~i~i  150 (515)
                      .+...+|| |||++||.+...     ..|+++|+.++ +.+...+.   .....++|+|||+.|+.+..+     ..|.+
T Consensus       175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~  251 (751)
T 2xe4_A          175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR  251 (751)
T ss_dssp             EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred             EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence            67889999 999999876542     35999999997 53221111   123568899999999888775     35888


Q ss_pred             EeCCCCce--eEEEEe-cCeEEEEEEEeeCCCEEEEEeC---CCeEEEEecCCCc-eE--EEecCCCCCCeEEEEEcCCC
Q psy17610        151 WSVRTLNE--LLRISV-MNMICACIVFTYDGKAILSGWN---DGFIRCFTPQSGK-LK--FIIPNAHNRGVTALAITQDG  221 (515)
Q Consensus       151 w~~~~~~~--~~~~~~-~~~~v~~~~~~~~~~~l~~~~~---dg~i~~~~~~~~~-~~--~~~~~~~~~~v~~~~~~~~~  221 (515)
                      +++.++..  ...+.. .......+.|+|||++|+....   ...|.++|+.++. ..  ..+..........+.|+..+
T Consensus       252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~  331 (751)
T 2xe4_A          252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTS  331 (751)
T ss_dssp             EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTT
T ss_pred             EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCC
Confidence            88887642  233332 2234567899999999887653   3468888988763 12  33323344555666655444


Q ss_pred             CEEEEecCC--C--cEEEEEccCCceeeEEeeccccC--ceEEEEEecCCCE-EEEEeCCCc--EEEEEc-------ccc
Q psy17610        222 TRLLSGGGE--G--QVRIWKLTRESQSLQCVLKEHTS--SVSVIQIKSDSKE-AMSASTDGT--CVLWDL-------IKS  285 (515)
Q Consensus       222 ~~l~~~~~d--~--~i~iw~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~-l~~~~~d~~--i~iwd~-------~~~  285 (515)
                      .+++....+  +  .|..+++... ......+..+..  .+..+.+  .++. +++...++.  +.++++       ..+
T Consensus       332 ~l~~~t~~~~a~~~~L~~~d~~~~-~~~~~~li~~~~~~~l~~~~~--~~~~lv~~~~~~g~~~l~~~dl~~~~~~~~~g  408 (751)
T 2xe4_A          332 HLVILTNEGGAVNHKLLIAPRGQP-SDWSHVLVDHSEDVFMESIAV--RSNYLVVAGRRAGLTRIWTMMADSQDGVFKAG  408 (751)
T ss_dssp             EEEEEECTTTCTTCEEEEEETTST-TCCCCEEECCCSSEEEEEEEE--CSSEEEEEEEETTEEEEEEEECCTTTSCCCTT
T ss_pred             EEEEEeCCCCCCCcEEEEEcCCCc-ccceeeEECCCCCcEEEEEEE--ECCEEEEEEEeCCEEEEEEEecccccccccCC
Confidence            444444433  3  5555665421 111110122333  3344444  4444 455566665  455564       333


Q ss_pred             eEEEEEEcCccEEEEEE------cCCCcEE-EEEECC---CeEEEEeCCCCce
Q psy17610        286 TRLIIMILPSMIMSAAY------HPSEVQL-ITCSTN---KMIDYWETCDGSI  328 (515)
Q Consensus       286 ~~~~~~~~~~~~~~~~~------~~~~~~l-~~~~~~---~~i~~~d~~~~~~  328 (515)
                      +....+..+.......+      .+++..+ ++.+..   ..+..+|+.+++.
T Consensus       409 ~~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~  461 (751)
T 2xe4_A          409 TGLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSR  461 (751)
T ss_dssp             TCCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCE
T ss_pred             ccceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcE
Confidence            31233333333222333      3455443 333332   4677888877653

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=98.93  E-value=2.2e-06  Score=72.31  Aligned_cols=203  Identities=12%  Similarity=0.082  Sum_probs=130.8

Q ss_pred             EEecCCCcEEEEEEecCCCEEE-EEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCC
Q psy17610         76 YLLKDDSGISSLQYNPVNNKVF-VGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVR  154 (515)
Q Consensus        76 ~~~~~~~~v~~~~~s~~~~~l~-~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~  154 (515)
                      .+.+-...+..++++|+++.|+ +...++.|...|.. +..+..+..+-......+++.+++.++++.-.++.+.++++.
T Consensus        21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~   99 (255)
T 3qqz_A           21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT   99 (255)
T ss_dssp             ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred             ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence            4445667899999999776555 56778999999998 565555433333567889999988655554457889999887


Q ss_pred             CCcee---EEEE------ecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCC---CceEEEe------cCCCCCCeEEEE
Q psy17610        155 TLNEL---LRIS------VMNMICACIVFTYDGKAILSGWNDGFIRCFTPQS---GKLKFII------PNAHNRGVTALA  216 (515)
Q Consensus       155 ~~~~~---~~~~------~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~---~~~~~~~------~~~~~~~v~~~~  216 (515)
                      ....+   ....      ..+.....++|+|.++.|.++.......+|.+..   .......      ...+...+..++
T Consensus       100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~  179 (255)
T 3qqz_A          100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE  179 (255)
T ss_dssp             TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred             CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence            65432   2222      1123357899999998888877765555665531   1111111      012344678999


Q ss_pred             EcCC-CCEEEEecCCCcEEEEEccCCceeeEEeec-cc------cCceEEEEEecCCCEEEEEeCCCcEEEEE
Q psy17610        217 ITQD-GTRLLSGGGEGQVRIWKLTRESQSLQCVLK-EH------TSSVSVIQIKSDSKEAMSASTDGTCVLWD  281 (515)
Q Consensus       217 ~~~~-~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-~~------~~~v~~~~~~~~~~~l~~~~~d~~i~iwd  281 (515)
                      ++|. +++++.......+..+|.... ......+. +.      -.....+++.++|+..+ .++...++.+.
T Consensus       180 ~dp~tg~lliLS~~s~~L~~~d~~g~-~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyI-vsE~n~~y~f~  250 (255)
T 3qqz_A          180 FNQQKNTLLVLSHESRALQEVTLVGE-VIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYI-VSEPNRFYRFT  250 (255)
T ss_dssp             EETTTTEEEEEETTTTEEEEECTTCC-EEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEE-EETTTEEEEEE
T ss_pred             EcCCCCeEEEEECCCCeEEEEcCCCC-EEEEEEcCCccCCcccccCCCCeeEECCCCCEEE-EcCCceEEEEE
Confidence            9994 556666777788999997533 23333333 21      13568999999998444 46666555554

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=98.91  E-value=1.5e-07  Score=93.15  Aligned_cols=239  Identities=10%  Similarity=0.102  Sum_probs=141.0

Q ss_pred             EEEEee-CCCEEEEEeCCC-----------eEEEEecCCCceE--EEecCCCCCCeEEEEEcCCCCEEEEecC-CCcEEE
Q psy17610        171 CIVFTY-DGKAILSGWNDG-----------FIRCFTPQSGKLK--FIIPNAHNRGVTALAITQDGTRLLSGGG-EGQVRI  235 (515)
Q Consensus       171 ~~~~~~-~~~~l~~~~~dg-----------~i~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~i  235 (515)
                      .+++.+ +++.++.|+.+.           .+.+||+.+++..  ...+..+.....++++..+++.++.|+. +..+.+
T Consensus       190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~  269 (656)
T 1k3i_A          190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL  269 (656)
T ss_dssp             EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred             eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence            556777 888888876542           5889999887642  2332334444456778889999999884 458999


Q ss_pred             EEccCCceeeEEeeccccCceEEEEEecCCCEEEEEe-CC-----CcEEEEEcccceEEEEE-----EcCccEEEEEEcC
Q psy17610        236 WKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAS-TD-----GTCVLWDLIKSTRLIIM-----ILPSMIMSAAYHP  304 (515)
Q Consensus       236 w~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-----~~i~iwd~~~~~~~~~~-----~~~~~~~~~~~~~  304 (515)
                      ||..+........+.... .-..++..++++.++.|+ .+     ..+.+||..+.+-...-     .....-....+..
T Consensus       270 yd~~t~~W~~~~~~~~~R-~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~  348 (656)
T 1k3i_A          270 YDSSSDSWIPGPDMQVAR-GYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRS  348 (656)
T ss_dssp             EEGGGTEEEECCCCSSCC-SSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTT
T ss_pred             ecCcCCceeECCCCCccc-cccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeec
Confidence            998765544443332222 223455667899999888 34     46899999876543321     0000000011223


Q ss_pred             CCcEEEEEECC---------CeEEEEeCCCCceEEEEecCCC--------ccEEEEEEc-CCCCEEEEEcCCC-------
Q psy17610        305 SEVQLITCSTN---------KMIDYWETCDGSIIRSLEGSDV--------AAVNCVDFV-DDGKYFLTGGADQ-------  359 (515)
Q Consensus       305 ~~~~l~~~~~~---------~~i~~~d~~~~~~~~~~~~~~~--------~~i~~~~~~-~~~~~l~~~~~dg-------  359 (515)
                      ++..++.++.+         ..+..||..+............        ..-.++.+. .++++++.|+.++       
T Consensus       349 ~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~  428 (656)
T 1k3i_A          349 DNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDAT  428 (656)
T ss_dssp             TCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCC
T ss_pred             CCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcC
Confidence            45555555444         3567888887764433322110        122334443 3788888888542       


Q ss_pred             ----eEEEEEccCCeeeeec--cCCCCC-eeEEEECCCCcEEEEEeCC-----------CcEEEEeCCC
Q psy17610        360 ----IVKMWMYREGVPCFVG--IGHAAS-ITKIKISPDKKVIVSVSAD-----------GGIFLWTFPE  410 (515)
Q Consensus       360 ----~i~i~d~~~~~~~~~~--~~~~~~-i~~~~~~~~~~~l~~~~~d-----------g~i~iw~~~~  410 (515)
                          .+.+||..+..-....  ..+... -.+++..|++++++.++.+           ..+.+||..+
T Consensus       429 ~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t  497 (656)
T 1k3i_A          429 TNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQ  497 (656)
T ss_dssp             CCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGG
T ss_pred             CcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCC
Confidence                6778887765433322  112222 2455677899999998864           4577887654

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=98.89  E-value=2.6e-05  Score=69.26  Aligned_cols=210  Identities=7%  Similarity=-0.028  Sum_probs=128.3

Q ss_pred             CCCcEEEEEEecCCCEEEEEe-cCceEEEEECCC---CceeEEeeccCccCeEEEEeCCCCcEEEEE-ecCCcEEEEeCC
Q psy17610         80 DDSGISSLQYNPVNNKVFVGT-VNCEIFLIDMNS---GFTLTLVNTCHTSAIYDLQFPVNFSSVFAT-CSKNDIRIWSVR  154 (515)
Q Consensus        80 ~~~~v~~~~~s~~~~~l~~~~-~d~~i~iw~~~~---~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~-~~d~~i~iw~~~  154 (515)
                      ....+..++|+++++.|+.+. .++.|..++.++   +.....+..........+++.+.+..|+.+ ...+.|.+.+++
T Consensus        28 ~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~  107 (316)
T 1ijq_A           28 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK  107 (316)
T ss_dssp             SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred             CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCC
Confidence            345678999999766666554 468999999876   122233333233456789998766666655 457889999987


Q ss_pred             CCceeEEEEecCeEEEEEEEeeCCCEEEEEeCC--CeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEe-cCCC
Q psy17610        155 TLNELLRISVMNMICACIVFTYDGKAILSGWND--GFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSG-GGEG  231 (515)
Q Consensus       155 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~  231 (515)
                      .......+.........+++.|.+..|+.+...  +.|...+++.... ..+....-...+.+++++++..|..+ ...+
T Consensus       108 g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~-~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~  186 (316)
T 1ijq_A          108 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLVTENIQWPNGITLDLLSGRLYWVDSKLH  186 (316)
T ss_dssp             SSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE-EEEECSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred             CCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCe-EEEEECCCCCceEEEEeccCCEEEEEECCCC
Confidence            543333333333456889999977766655542  6888888764433 22322334567899999877666554 4567


Q ss_pred             cEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEE
Q psy17610        232 QVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIM  291 (515)
Q Consensus       232 ~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~  291 (515)
                      .|..+|++...................+++. .+..+++-...+.|..++..+++....+
T Consensus       187 ~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~~~~~i  245 (316)
T 1ijq_A          187 SISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLL  245 (316)
T ss_dssp             EEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred             eEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCcceEEE
Confidence            8999998643322222211122345677774 3455555556678888887666544443

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=98.84  E-value=4.6e-05  Score=68.12  Aligned_cols=270  Identities=10%  Similarity=0.091  Sum_probs=151.1

Q ss_pred             ccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEE----ecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCc
Q psy17610        124 TSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRIS----VMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGK  199 (515)
Q Consensus       124 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~  199 (515)
                      ...+.++.|.+++..++ ++..+.| +...+.|+.=....    .....+..+.|.+ +. +++++..+.|.. ..+.|+
T Consensus        35 ~~~~~~v~~~~~~~~~~-~G~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~-~~~~g~~g~i~~-S~DgG~  109 (327)
T 2xbg_A           35 TATILDMSFIDRHHGWL-VGVNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NE-GWIVGEPPIMLH-TTDGGQ  109 (327)
T ss_dssp             SSCEEEEEESSSSCEEE-EETTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET-TE-EEEEEETTEEEE-ESSTTS
T ss_pred             CCcEEEEEECCCCcEEE-EcCCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC-Ce-EEEEECCCeEEE-ECCCCC
Confidence            45789999987665555 5556654 33334343222221    1244688888875 43 444556665543 333344


Q ss_pred             eEEEecC--CCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcE
Q psy17610        200 LKFIIPN--AHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTC  277 (515)
Q Consensus       200 ~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i  277 (515)
                      .-.....  .+...+..+.+.+++..++.+ .++.|  |...................+..+.+.+++.+++.+. +|.+
T Consensus       110 tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v--~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~-~G~~  185 (327)
T 2xbg_A          110 SWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAI--YRTKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSS-RGSF  185 (327)
T ss_dssp             SCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCE--EEESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEET-TSSE
T ss_pred             CceECccccCCCCCeEEEEEECCCCEEEEe-CCccE--EEEcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEEC-CCcE
Confidence            4333211  234557788887777666655 45544  3222222223333344556788999999887776554 4444


Q ss_pred             EE-EEc--ccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecC---CCccEEEEEEcCCCCE
Q psy17610        278 VL-WDL--IKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGS---DVAAVNCVDFVDDGKY  351 (515)
Q Consensus       278 ~i-wd~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~  351 (515)
                      .. .|-  .+-+.+ ....+..+..+.+.+++..+ ..+.+|.+++.+...++.-..+...   ....+..+.+.+++.+
T Consensus       186 ~~S~d~gG~tW~~~-~~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~  263 (327)
T 2xbg_A          186 YSTWEPGQTAWEPH-NRTTSRRLHNMGFTPDGRLW-MIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEV  263 (327)
T ss_dssp             EEEECTTCSSCEEE-ECCSSSCEEEEEECTTSCEE-EEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCE
T ss_pred             EEEeCCCCCceeEC-CCCCCCccceeEECCCCCEE-EEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEE
Confidence            33 342  222333 12234568888898988765 4456777776643223332222222   1135788999988887


Q ss_pred             EEEEcCCCeEEEEEccCCeeeeecc---CCCCCeeEEEECCCCcEEEEEeCCCcEEEEe
Q psy17610        352 FLTGGADQIVKMWMYREGVPCFVGI---GHAASITKIKISPDKKVIVSVSADGGIFLWT  407 (515)
Q Consensus       352 l~~~~~dg~i~i~d~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~  407 (515)
                      ++++. +|.+ .+..+.++.-..+.   .....+.++.|.+++. +++++.+|.|.-++
T Consensus       264 ~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~  319 (327)
T 2xbg_A          264 WLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYV  319 (327)
T ss_dssp             EEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEEC
T ss_pred             EEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEc
Confidence            77765 5656 34444454333332   2345678899976555 66667889877665

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=98.84  E-value=1.6e-05  Score=71.67  Aligned_cols=246  Identities=11%  Similarity=0.007  Sum_probs=151.3

Q ss_pred             CCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec-CCcEEEEeCCCCcee
Q psy17610         81 DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS-KNDIRIWSVRTLNEL  159 (515)
Q Consensus        81 ~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~~  159 (515)
                      ....+|.+..+ ..+|+.+. ...|+..+++.. ....... .......++|++.+..|+.+.. .+.|..+++......
T Consensus        33 ~d~~~C~~~~~-~~~ll~~~-~~~I~~i~~~g~-~~~~~~~-~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~  108 (349)
T 3v64_C           33 PDRRSCKALGP-EPVLLFAN-RIDIRQVLPHRS-EYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE  108 (349)
T ss_dssp             TTSSCEEESSS-CCEEEEEC-BSCEEEECTTSC-CEEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred             CCCCccccccc-CceeEeec-ccceEEEeCCCC-eeEEeec-CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCce
Confidence            34456777666 44555554 346888888763 4444444 3345789999987667776654 788999998765533


Q ss_pred             EEEEecCeEEEEEEEeeCCCEEE-EEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEe-cCC-CcEEEE
Q psy17610        160 LRISVMNMICACIVFTYDGKAIL-SGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSG-GGE-GQVRIW  236 (515)
Q Consensus       160 ~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d-~~i~iw  236 (515)
                      ..+.........+++.+.+..|+ +-...+.|.+.+++........ ...-.....++++|.+..|+.. ..+ +.|..+
T Consensus       109 ~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~-~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~  187 (349)
T 3v64_C          109 EVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL-WQSLEKPRAIALHPMEGTIYWTDWGNTPRIEAS  187 (349)
T ss_dssp             EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-CTTCSCEEEEEEETTTTEEEEEECSSSCEEEEE
T ss_pred             EEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEE-eCCCCCcceEEEecCcCeEEEeccCCCCEEEEE
Confidence            33322223446788887655554 4455678999998765443333 3344567899999965555544 344 678888


Q ss_pred             EccCCceeeEEeeccccCceEEEEEecCCCEEEEEe-CCCcEEEEEcccceEEEEEEc-CccEEEEEEcCCCcEEEEEEC
Q psy17610        237 KLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAS-TDGTCVLWDLIKSTRLIIMIL-PSMIMSAAYHPSEVQLITCST  314 (515)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~  314 (515)
                      +++....  .......-.....++++|++..|+.+. ..+.|..+|+........... ......+++ ..+..+++-..
T Consensus       188 ~~dG~~~--~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~  264 (349)
T 3v64_C          188 SMDGSGR--RIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWH  264 (349)
T ss_dssp             ETTSCSC--EESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETT
T ss_pred             eCCCCCc--EEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEE-ECCEEEEecCC
Confidence            8753221  111222334568899998777766655 457799999865433333322 234567777 34444555555


Q ss_pred             CCeEEEEeCCCCceEEEEec
Q psy17610        315 NKMIDYWETCDGSIIRSLEG  334 (515)
Q Consensus       315 ~~~i~~~d~~~~~~~~~~~~  334 (515)
                      .+.|..++..+++....+..
T Consensus       265 ~~~V~~~~~~~G~~~~~i~~  284 (349)
T 3v64_C          265 TKSINSANKFTGKNQEIIRN  284 (349)
T ss_dssp             TTEEEEEETTTCCSCEEEEC
T ss_pred             CCeEEEEEccCCCccEEecc
Confidence            77788888666666555543

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=98.84  E-value=4.5e-05  Score=68.78  Aligned_cols=241  Identities=8%  Similarity=-0.051  Sum_probs=148.2

Q ss_pred             eEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEe-CCCeEEEEecCCCceEEEec
Q psy17610        127 IYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGW-NDGFIRCFTPQSGKLKFIIP  205 (515)
Q Consensus       127 v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~~~~~~~~~~~~~  205 (515)
                      .+|.+..++ .+|+.+. ...|+..++........+. .......++|++....|+... ..+.|..+++..+.....+ 
T Consensus        36 ~~C~~~~~~-~~ll~~~-~~~I~~i~~~g~~~~~~~~-~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~-  111 (349)
T 3v64_C           36 RSCKALGPE-PVLLFAN-RIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV-  111 (349)
T ss_dssp             SCEEESSSC-CEEEEEC-BSCEEEECTTSCCEEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-
T ss_pred             CcccccccC-ceeEeec-ccceEEEeCCCCeeEEeec-CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEE-
Confidence            445555554 3555443 3558888876554433333 334468899998766666554 5688999998876654444 


Q ss_pred             CCCCCCeEEEEEcCCCC-EEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeC-C-CcEEEEEc
Q psy17610        206 NAHNRGVTALAITQDGT-RLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST-D-GTCVLWDL  282 (515)
Q Consensus       206 ~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-~~i~iwd~  282 (515)
                      .........+++.+.+. +.++-...+.|.+.+++....  .............++++|.+..++.+.. . +.|...++
T Consensus       112 ~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~--~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~  189 (349)
T 3v64_C          112 STGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR--KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSM  189 (349)
T ss_dssp             CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC--EEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred             eCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCce--EEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeC
Confidence            22334457889987544 445556678899999863322  2222233355689999997666655543 3 67888887


Q ss_pred             ccceEEEEEE-cCccEEEEEEcCCCcEEEEEE-CCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCe
Q psy17610        283 IKSTRLIIMI-LPSMIMSAAYHPSEVQLITCS-TNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQI  360 (515)
Q Consensus       283 ~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~  360 (515)
                      .......... .-.....++++|++..|+.+. ..+.|..+|+........+... ......+++ ..+.++++-...+.
T Consensus       190 dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~-~~~P~giav-~~~~ly~td~~~~~  267 (349)
T 3v64_C          190 DGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQG-LPHPFAITV-FEDSLYWTDWHTKS  267 (349)
T ss_dssp             TSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS-CSSEEEEEE-ETTEEEEEETTTTE
T ss_pred             CCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCC-CCCceEEEE-ECCEEEEecCCCCe
Confidence            6433322222 223578999998777766655 4678999998654333333222 245667777 34566666666778


Q ss_pred             EEEEEccCCeeeeec
Q psy17610        361 VKMWMYREGVPCFVG  375 (515)
Q Consensus       361 i~i~d~~~~~~~~~~  375 (515)
                      |..++..+++....+
T Consensus       268 V~~~~~~~G~~~~~i  282 (349)
T 3v64_C          268 INSANKFTGKNQEII  282 (349)
T ss_dssp             EEEEETTTCCSCEEE
T ss_pred             EEEEEccCCCccEEe
Confidence            888886566554444

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=98.84  E-value=6.3e-06  Score=76.59  Aligned_cols=253  Identities=7%  Similarity=0.009  Sum_probs=146.5

Q ss_pred             ceEEEEEecC--CCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCC-----eEEEEeCCCCc
Q psy17610        255 SVSVIQIKSD--SKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNK-----MIDYWETCDGS  327 (515)
Q Consensus       255 ~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~i~~~d~~~~~  327 (515)
                      ....++++|+  ...|+.+...+.|+.+|..++..............++++++++ |+++...+     .+..++...+.
T Consensus       140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~  218 (433)
T 4hw6_A          140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGF  218 (433)
T ss_dssp             CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTT
T ss_pred             CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCe
Confidence            4568899984  4556655554889999998777666555455689999999999 55554321     23344432221


Q ss_pred             e-EEEEecCCCccEEEEEEcC-CCCEEEEEcCCCeEEEEEccCCeeeeec-c-CCCCCeeEEEECCCCcEEEEEe-CCCc
Q psy17610        328 I-IRSLEGSDVAAVNCVDFVD-DGKYFLTGGADQIVKMWMYREGVPCFVG-I-GHAASITKIKISPDKKVIVSVS-ADGG  402 (515)
Q Consensus       328 ~-~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~-~~~~~i~~~~~~~~~~~l~~~~-~dg~  402 (515)
                      . ...+..  ......++++| +|.++++-..++.|+.++..++.....+ . +....-..++|+|++++|..+. ..+.
T Consensus       219 ~~~~~~~~--~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~  296 (433)
T 4hw6_A          219 TERLSLCN--ARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHC  296 (433)
T ss_dssp             CCEEEEEE--CSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTE
T ss_pred             eccccccc--cCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCE
Confidence            1 111211  13456788999 7777667667889999998866552222 1 1122234699999999665554 4678


Q ss_pred             EEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeee---------ccCCcEEEEeecCCeEEEEecCCC
Q psy17610        403 IFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAY---------HPSEVQLITCSTNKMIDYWETCDG  473 (515)
Q Consensus       403 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---------s~~~~~l~~~~~dg~v~iwd~~~~  473 (515)
                      |..+++..................... ..........-.....+++         .++|.+.++-...+.|+.++. +|
T Consensus       297 I~~~~~d~~~~~~~~~~~~ag~~g~~g-~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G  374 (433)
T 4hw6_A          297 IYRVDYNRETGKLAVPYIVCGQHSSPG-WVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EG  374 (433)
T ss_dssp             EEEEEBCTTTCCBCCCEEEEECTTCCC-CBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TS
T ss_pred             EEEEeCCCCCcccCcEEEEEecCCCCc-cCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CC
Confidence            888876532211110000000000000 0000000001123567888         677777776667788999984 56


Q ss_pred             eeeeeeccc-----------------ccceEEEEEEc-CCCcEEEEeecCCeEEEEEE
Q psy17610        474 SIIRSLEGS-----------------DVAAVNCVDFV-DDGKYFLTGGADQIVKICLY  513 (515)
Q Consensus       474 ~~~~~~~~~-----------------~~~~v~~~~~s-~~~~~l~s~~~dg~v~iw~~  513 (515)
                      ...... +.                 .......|+++ ++|.++++=..++.|+.++.
T Consensus       375 ~v~t~~-G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~  431 (433)
T 4hw6_A          375 RVTTYA-GRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP  431 (433)
T ss_dssp             EEEEEE-CCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred             CEEEEE-eCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence            543322 11                 01347789999 67777666666788888764

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=98.83  E-value=7.3e-07  Score=89.53  Aligned_cols=240  Identities=8%  Similarity=-0.011  Sum_probs=134.5

Q ss_pred             CeEEEEeC-CCCcEEEEEec-CC----cEEEEeCCCC-ceeE-EEEecCeEEEEEEEeeCCCEEEEEeCC-----CeEEE
Q psy17610        126 AIYDLQFP-VNFSSVFATCS-KN----DIRIWSVRTL-NELL-RISVMNMICACIVFTYDGKAILSGWND-----GFIRC  192 (515)
Q Consensus       126 ~v~~~~~~-~~~~~l~~~~~-d~----~i~iw~~~~~-~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~~  192 (515)
                      .+...+|| |||++|+.+.. +|    +|+++|+.++ +.+. .+.   .....++|+|||+.|+....+     ..|..
T Consensus       175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~  251 (751)
T 2xe4_A          175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR  251 (751)
T ss_dssp             EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred             EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence            57889999 99998887665 22    4999999998 6322 121   123468899999988877665     36888


Q ss_pred             EecCCCce--EEEecCCCCCCeEEEEEcCCCCEEEEec---CCCcEEEEEccCCceee--EEeeccccCceEEEEEecCC
Q psy17610        193 FTPQSGKL--KFIIPNAHNRGVTALAITQDGTRLLSGG---GEGQVRIWKLTRESQSL--QCVLKEHTSSVSVIQIKSDS  265 (515)
Q Consensus       193 ~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d~~i~iw~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~  265 (515)
                      +++.+++.  ...+..........+.|+|||++|+..+   ....|.++|+.......  .............+.|+. +
T Consensus       252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~-g  330 (751)
T 2xe4_A          252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG-T  330 (751)
T ss_dssp             EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET-T
T ss_pred             EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee-C
Confidence            88887642  2222223334567889999999888655   23467888886442223  333333444555555443 5


Q ss_pred             CEEEEEe-CC----CcEEEEEcccc-eEEE-EEEcCc--cEEEEEEcCCCcEEEEEECCCe--EEEEeC-------CCCc
Q psy17610        266 KEAMSAS-TD----GTCVLWDLIKS-TRLI-IMILPS--MIMSAAYHPSEVQLITCSTNKM--IDYWET-------CDGS  327 (515)
Q Consensus       266 ~~l~~~~-~d----~~i~iwd~~~~-~~~~-~~~~~~--~~~~~~~~~~~~~l~~~~~~~~--i~~~d~-------~~~~  327 (515)
                      +.|+..+ .+    ..|..+++.+. .... .+....  .+..+.+. .+..+++...++.  +.++++       ..++
T Consensus       331 ~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl~~~~~~~~~g~  409 (751)
T 2xe4_A          331 SHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMADSQDGVFKAGT  409 (751)
T ss_dssp             TEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEECCTTTSCCCTTT
T ss_pred             CEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEecccccccccCCc
Confidence            5554443 33    25666776642 2122 233332  34445544 2334445555664  556675       3333


Q ss_pred             eEEEEecCCCccEEEEEE----cCCCC-EEEEEcCC---CeEEEEEccCCe
Q psy17610        328 IIRSLEGSDVAAVNCVDF----VDDGK-YFLTGGAD---QIVKMWMYREGV  370 (515)
Q Consensus       328 ~~~~~~~~~~~~i~~~~~----~~~~~-~l~~~~~d---g~i~i~d~~~~~  370 (515)
                      ....+.......+..+.+    ++++. ++++.+..   ..+..+|+.+++
T Consensus       410 ~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~  460 (751)
T 2xe4_A          410 GLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHS  460 (751)
T ss_dssp             CCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCC
T ss_pred             cceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence            134443322122333432    34554 33333322   457777776654

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=98.82  E-value=4.9e-05  Score=67.91  Aligned_cols=274  Identities=12%  Similarity=0.063  Sum_probs=154.6

Q ss_pred             cCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeec---cCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCC
Q psy17610         79 KDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNT---CHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRT  155 (515)
Q Consensus        79 ~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~---~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~  155 (515)
                      +....+.+|.|.+.+..+++| ..|.| +...+.|+.-.....   .....+.++.|.+ + .+++++.++.|.. ..+.
T Consensus        33 ~~~~~~~~v~~~~~~~~~~~G-~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~-~~~~~g~~g~i~~-S~Dg  107 (327)
T 2xbg_A           33 PTTATILDMSFIDRHHGWLVG-VNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-N-EGWIVGEPPIMLH-TTDG  107 (327)
T ss_dssp             SCSSCEEEEEESSSSCEEEEE-TTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET-T-EEEEEEETTEEEE-ESST
T ss_pred             CCCCcEEEEEECCCCcEEEEc-CCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC-C-eEEEEECCCeEEE-ECCC
Confidence            345689999998878777754 56655 334444433333221   1244688999986 3 4555566664433 3333


Q ss_pred             CceeEEEEe---cCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCc
Q psy17610        156 LNELLRISV---MNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQ  232 (515)
Q Consensus       156 ~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~  232 (515)
                      |+.-.....   ....+..+.+.+++..++++ .++.|.. ..+.|+.-.....+....+..+.+.+++.+++.+...+.
T Consensus       108 G~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~  185 (327)
T 2xbg_A          108 GQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSF  185 (327)
T ss_dssp             TSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSE
T ss_pred             CCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcE
Confidence            433222221   12345677777777655554 4564432 223344433343456678899999999888877655433


Q ss_pred             EEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC-----ccEEEEEEcCCCc
Q psy17610        233 VRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP-----SMIMSAAYHPSEV  307 (515)
Q Consensus       233 i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-----~~~~~~~~~~~~~  307 (515)
                      .+-.|-........  .......+..+.+.+++..+ .++.+|.+++.+...++.-.....+     ..+..+.+.+++.
T Consensus       186 ~~S~d~gG~tW~~~--~~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~  262 (327)
T 2xbg_A          186 YSTWEPGQTAWEPH--NRTTSRRLHNMGFTPDGRLW-MIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNE  262 (327)
T ss_dssp             EEEECTTCSSCEEE--ECCSSSCEEEEEECTTSCEE-EEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSC
T ss_pred             EEEeCCCCCceeEC--CCCCCCccceeEECCCCCEE-EEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCE
Confidence            33333211222222  22345678888898887654 5566787777643334333333222     2478888988777


Q ss_pred             EEEEEECCCeEEEEeCCCCceEEEEecC--CCccEEEEEEcCCCCEEEEEcCCCeEEEEE
Q psy17610        308 QLITCSTNKMIDYWETCDGSIIRSLEGS--DVAAVNCVDFVDDGKYFLTGGADQIVKMWM  365 (515)
Q Consensus       308 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d  365 (515)
                      .++++ .++.+ ++....++.-..+...  ....+.++.|.+++. +++++.+|.|.-++
T Consensus       263 ~~~~g-~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~  319 (327)
T 2xbg_A          263 VWLAG-GAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYV  319 (327)
T ss_dssp             EEEEE-STTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEEC
T ss_pred             EEEEe-CCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEc
Confidence            66655 46666 3444445444434321  124577888876655 55556688776654

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=98.82  E-value=7.3e-06  Score=69.16  Aligned_cols=200  Identities=10%  Similarity=0.111  Sum_probs=135.0

Q ss_pred             ecCeEEEEEEEeeCCCEEE-EEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCc
Q psy17610        164 VMNMICACIVFTYDGKAIL-SGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRES  242 (515)
Q Consensus       164 ~~~~~v~~~~~~~~~~~l~-~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~  242 (515)
                      +-...+..++|+|+++.|+ +...++.|...|.. ++....++..-......+++.+++.++++.-.++.+.++++....
T Consensus        24 g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~  102 (255)
T 3qqz_A           24 GITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNS  102 (255)
T ss_dssp             TCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTC
T ss_pred             CcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCC
Confidence            3345689999999877555 46778889999988 888777754444678899999988877776677889999886443


Q ss_pred             e-eeEEee------ccccCceEEEEEecCCCEEEEEeCCCcEEEEEccc---ceEEEEEEc--------CccEEEEEEcC
Q psy17610        243 Q-SLQCVL------KEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIK---STRLIIMIL--------PSMIMSAAYHP  304 (515)
Q Consensus       243 ~-~~~~~~------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~---~~~~~~~~~--------~~~~~~~~~~~  304 (515)
                      . ......      .........++++|.++.|+++.+.....+|.+..   ...+.....        -..+.+++++|
T Consensus       103 ~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp  182 (255)
T 3qqz_A          103 EVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQ  182 (255)
T ss_dssp             CEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEET
T ss_pred             eeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcC
Confidence            2 111111      12344568999999998888888766666666541   111222211        12468899999


Q ss_pred             CCcE-EEEEECCCeEEEEeCCCCceEEEEecCCC--------ccEEEEEEcCCCCEEEEEcCCCeEEEEEc
Q psy17610        305 SEVQ-LITCSTNKMIDYWETCDGSIIRSLEGSDV--------AAVNCVDFVDDGKYFLTGGADQIVKMWMY  366 (515)
Q Consensus       305 ~~~~-l~~~~~~~~i~~~d~~~~~~~~~~~~~~~--------~~i~~~~~~~~~~~l~~~~~dg~i~i~d~  366 (515)
                      .... ++.......+..+|.. ++.+..+.....        .....++|.++|+++++ ++.+.++.|.-
T Consensus       183 ~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~~  251 (255)
T 3qqz_A          183 QKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFTP  251 (255)
T ss_dssp             TTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEEC
T ss_pred             CCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEEe
Confidence            6554 4555567788899965 556666654421        35688999999985555 66677776654

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=98.81  E-value=4.9e-05  Score=67.51  Aligned_cols=232  Identities=11%  Similarity=-0.013  Sum_probs=142.3

Q ss_pred             EEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec-CCcEEEEeCCC---CceeEEEE-ecCeEE
Q psy17610         95 KVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS-KNDIRIWSVRT---LNELLRIS-VMNMIC  169 (515)
Q Consensus        95 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~---~~~~~~~~-~~~~~v  169 (515)
                      +|+.+.. ..|+..|+++.. ...+.. .......++|++++..|+.+.. .+.|..+++..   +.....+. ..-...
T Consensus         3 ~ll~~~~-~~I~~i~~~~~~-~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p   79 (316)
T 1ijq_A            3 YLFFTNR-HEVRKMTLDRSE-YTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP   79 (316)
T ss_dssp             EEEEECB-SSEEEEETTSCC-CEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCC
T ss_pred             EEEEECC-CeEEEEECCCcc-eEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCc
Confidence            4555544 468999998743 333333 3456789999987767776665 68899999875   12222222 122344


Q ss_pred             EEEEEeeCCCEEE-EEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecC-C-CcEEEEEccCCceeeE
Q psy17610        170 ACIVFTYDGKAIL-SGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGG-E-GQVRIWKLTRESQSLQ  246 (515)
Q Consensus       170 ~~~~~~~~~~~l~-~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-~~i~iw~~~~~~~~~~  246 (515)
                      ..+++.+.+..|+ +-...+.|.+++++........ .........++++|.+..|+.+.. . +.|...+++...... 
T Consensus        80 ~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~-~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~-  157 (316)
T 1ijq_A           80 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLF-RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS-  157 (316)
T ss_dssp             CEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEE-ECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEE-
T ss_pred             CEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEE-ECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEE-
Confidence            6788887555555 4456789999998765443333 233456789999996665554443 2 678888875322211 


Q ss_pred             EeeccccCceEEEEEecCCCEEEEEe-CCCcEEEEEcccceEEEEEEc---CccEEEEEEcCCCcEEEEEECCCeEEEEe
Q psy17610        247 CVLKEHTSSVSVIQIKSDSKEAMSAS-TDGTCVLWDLIKSTRLIIMIL---PSMIMSAAYHPSEVQLITCSTNKMIDYWE  322 (515)
Q Consensus       247 ~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~i~~~d  322 (515)
                       .....-.....+++++++..|+.+. ..+.|..+|+...........   ......+++. .+..+++-...+.|..++
T Consensus       158 -~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~  235 (316)
T 1ijq_A          158 -LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSAN  235 (316)
T ss_dssp             -EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEE
T ss_pred             -EEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEe
Confidence             1122334568999998877776665 456899999875433333322   1345677774 345555555677888888


Q ss_pred             CCCCceEEEEe
Q psy17610        323 TCDGSIIRSLE  333 (515)
Q Consensus       323 ~~~~~~~~~~~  333 (515)
                      ..+++.+..+.
T Consensus       236 ~~~g~~~~~i~  246 (316)
T 1ijq_A          236 RLTGSDVNLLA  246 (316)
T ss_dssp             TTTCCCCEEEE
T ss_pred             CCCCcceEEEe
Confidence            77776655554

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=98.80  E-value=7.4e-06  Score=76.14  Aligned_cols=237  Identities=11%  Similarity=0.070  Sum_probs=140.1

Q ss_pred             CcEEEEEEecC--CCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCC----c-EEEEeCC
Q psy17610         82 SGISSLQYNPV--NNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKN----D-IRIWSVR  154 (515)
Q Consensus        82 ~~v~~~~~s~~--~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~----~-i~iw~~~  154 (515)
                      .....|+++|+  +..|+++...+.|+.+|..++ .+..... .......++++++|. |+++...+    . +...+..
T Consensus       139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g-~v~~~~~-~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~  215 (433)
T 4hw6_A          139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQ-YVDIKTT-NIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRA  215 (433)
T ss_dssp             SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTT-EEEEECC-CCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGG
T ss_pred             CCCceEEEccccCCCEEEEEeCCCCEEEEECCCC-EEEEeec-CCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECC
Confidence            34678999995  555666655589999999875 3443333 445689999999998 66555422    2 3333332


Q ss_pred             CCcee-EEEEecCeEEEEEEEee-CCCEEEEEeCCCeEEEEecCCCceEEEe-cCCCCCCeEEEEEcCCCCEEE-EecCC
Q psy17610        155 TLNEL-LRISVMNMICACIVFTY-DGKAILSGWNDGFIRCFTPQSGKLKFII-PNAHNRGVTALAITQDGTRLL-SGGGE  230 (515)
Q Consensus       155 ~~~~~-~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~-~~~~d  230 (515)
                      .+... ..+. .......++++| ++...++-..++.|+.++..++.....+ ..+....-..++|+|+++.|. +-...
T Consensus       216 ~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~  294 (433)
T 4hw6_A          216 SGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGK  294 (433)
T ss_dssp             GTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTT
T ss_pred             CCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCC
Confidence            22111 1222 222345688899 6665555556788999999877662222 222223345799999998554 44566


Q ss_pred             CcEEEEEccCCceee--EEeecc---------------ccCceEEEEE---------ecCCCEEEEEeCCCcEEEEEccc
Q psy17610        231 GQVRIWKLTRESQSL--QCVLKE---------------HTSSVSVIQI---------KSDSKEAMSASTDGTCVLWDLIK  284 (515)
Q Consensus       231 ~~i~iw~~~~~~~~~--~~~~~~---------------~~~~v~~~~~---------~~~~~~l~~~~~d~~i~iwd~~~  284 (515)
                      +.|+.++++......  ...+.+               .-.....+++         .+++.++++-...+.|+.++. +
T Consensus       295 ~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~  373 (433)
T 4hw6_A          295 HCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-E  373 (433)
T ss_dssp             TEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-T
T ss_pred             CEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-C
Confidence            889998875322211  111111               1123567888         666666666666778888885 4


Q ss_pred             ceEEEEEEcC------------------ccEEEEEEc-CCCcEEEEEECCCeEEEEeC
Q psy17610        285 STRLIIMILP------------------SMIMSAAYH-PSEVQLITCSTNKMIDYWET  323 (515)
Q Consensus       285 ~~~~~~~~~~------------------~~~~~~~~~-~~~~~l~~~~~~~~i~~~d~  323 (515)
                      +.........                  .....+++. +++..+++=..++.|+.+++
T Consensus       374 G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~  431 (433)
T 4hw6_A          374 GRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP  431 (433)
T ss_dssp             SEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred             CCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence            5433332110                  126778888 45555555455667776664

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.80  E-value=1.3e-05  Score=73.36  Aligned_cols=245  Identities=11%  Similarity=0.009  Sum_probs=151.6

Q ss_pred             cEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec-CCcEEEEeCCCCceeEE
Q psy17610         83 GISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS-KNDIRIWSVRTLNELLR  161 (515)
Q Consensus        83 ~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~~~~  161 (515)
                      .-+|.+..+ ..+|+.+.. ..|+.+++.++ ....+.. .......++|++.+..|+.+.. .+.|..++++.......
T Consensus        78 ~~~C~~~~~-~~~l~~~~~-~~I~~i~~~~~-~~~~~~~-~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~  153 (386)
T 3v65_B           78 RRSCKALGP-EPVLLFANR-IDIRQVLPHRS-EYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEV  153 (386)
T ss_dssp             SSCEEECSS-CCEEEEECB-SCEEEECTTSC-CCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEE
T ss_pred             CCeECCccc-cceeEeecC-ccceeeccCCC-cEEEEec-CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEE
Confidence            344666665 445555544 57999998874 3444443 3345789999987667776654 78899999876543333


Q ss_pred             EEecCeEEEEEEEeeCCCEEE-EEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEec-CC-CcEEEEEc
Q psy17610        162 ISVMNMICACIVFTYDGKAIL-SGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGG-GE-GQVRIWKL  238 (515)
Q Consensus       162 ~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-~~i~iw~~  238 (515)
                      +.........+++.+.+..|+ +-...+.|.+.+++.......+ .........++++|.+..|+... .. +.|..+++
T Consensus       154 ~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~-~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~  232 (386)
T 3v65_B          154 VSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL-WQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSM  232 (386)
T ss_dssp             ECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEE-CSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred             EeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEee-cCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeC
Confidence            322223346788887655555 4445678999988765444333 33445678999998766555443 33 67888887


Q ss_pred             cCCceeeEEeeccccCceEEEEEecCCCEEEEEe-CCCcEEEEEcccceEEEEEEc-CccEEEEEEcCCCcEEEEEECCC
Q psy17610        239 TRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAS-TDGTCVLWDLIKSTRLIIMIL-PSMIMSAAYHPSEVQLITCSTNK  316 (515)
Q Consensus       239 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~  316 (515)
                      +....  .......-.....++++|++..|+.+. ..+.|..+|+........... ......+++ ..+..+++-...+
T Consensus       233 dG~~~--~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~  309 (386)
T 3v65_B          233 DGSGR--RIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTK  309 (386)
T ss_dssp             TSCSC--EEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTT
T ss_pred             CCCCc--EEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCCC
Confidence            53222  222222334568899998777666554 457799998865433333322 235667777 3445555555677


Q ss_pred             eEEEEeCCCCceEEEEecC
Q psy17610        317 MIDYWETCDGSIIRSLEGS  335 (515)
Q Consensus       317 ~i~~~d~~~~~~~~~~~~~  335 (515)
                      .|..++..+++....+...
T Consensus       310 ~V~~~~~~~G~~~~~i~~~  328 (386)
T 3v65_B          310 SINSANKFTGKNQEIIRNK  328 (386)
T ss_dssp             EEEEEETTTCCSCEEEECS
T ss_pred             eEEEEECCCCcceEEEccC
Confidence            8888887777666666543

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.76  E-value=0.0001  Score=67.73  Aligned_cols=235  Identities=12%  Similarity=0.002  Sum_probs=147.1

Q ss_pred             CEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec-CCcEEEEeCCCC----ceeEEEEecCeE
Q psy17610         94 NKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS-KNDIRIWSVRTL----NELLRISVMNMI  168 (515)
Q Consensus        94 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~----~~~~~~~~~~~~  168 (515)
                      .+|+.+. ...|+..+++.. ....+.. ....+..++|++.+..|+.+.. .+.|..+++...    .....+......
T Consensus        84 ~~ll~~~-~~~I~~i~l~~~-~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~  160 (400)
T 3p5b_L           84 AYLFFTN-RHEVRKMTLDRS-EYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQA  160 (400)
T ss_dssp             CEEEEEE-TTEEEEECTTSC-SCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSC
T ss_pred             ceeEEec-cceeEEEccCCc-ceeEecc-ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCC
Confidence            4555544 458999999874 3333333 4567889999987777777765 678888988752    222222223345


Q ss_pred             EEEEEEeeCCCEEE-EEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEec--CCCcEEEEEccCCceee
Q psy17610        169 CACIVFTYDGKAIL-SGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGG--GEGQVRIWKLTRESQSL  245 (515)
Q Consensus       169 v~~~~~~~~~~~l~-~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~iw~~~~~~~~~  245 (515)
                      ...+++.+.+..|+ +-...+.|.+.+++.......+ .........+++.|.+..|+...  ..+.|...+++....  
T Consensus       161 p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~-~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~--  237 (400)
T 3p5b_L          161 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLF-RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI--  237 (400)
T ss_dssp             EEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEE-ECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSC--
T ss_pred             cccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEE-eCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCcc--
Confidence            67889988555455 4456788999998866544444 33445578999999666665544  236788888753222  


Q ss_pred             EEeeccccCceEEEEEecCCCEEEEEeC-CCcEEEEEcccceEEEEEEcC---ccEEEEEEcCCCcEEEEEECCCeEEEE
Q psy17610        246 QCVLKEHTSSVSVIQIKSDSKEAMSAST-DGTCVLWDLIKSTRLIIMILP---SMIMSAAYHPSEVQLITCSTNKMIDYW  321 (515)
Q Consensus       246 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~i~~~  321 (515)
                      .......-.....|++++++..|+.+.. .+.|..+|+............   .....+++. .+..+++-...+.|..+
T Consensus       238 ~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~  316 (400)
T 3p5b_L          238 YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSA  316 (400)
T ss_dssp             EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEE
T ss_pred             EEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEE
Confidence            2222233356789999988777776654 578999998655443333321   245566663 33444455566788888


Q ss_pred             eCCCCceEEEEecC
Q psy17610        322 ETCDGSIIRSLEGS  335 (515)
Q Consensus       322 d~~~~~~~~~~~~~  335 (515)
                      |..+++.+..+...
T Consensus       317 ~~~~G~~~~~i~~~  330 (400)
T 3p5b_L          317 NRLTGSDVNLLAEN  330 (400)
T ss_dssp             ESSSCCCCEEEECS
T ss_pred             EcCCCCceEEEecC
Confidence            87777777666543

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.76  E-value=4e-05  Score=70.18  Aligned_cols=241  Identities=8%  Similarity=-0.039  Sum_probs=150.0

Q ss_pred             EEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEE-eCCCeEEEEecCCCceEEEecC
Q psy17610        128 YDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSG-WNDGFIRCFTPQSGKLKFIIPN  206 (515)
Q Consensus       128 ~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~~~~~~~~~~~~~~~~  206 (515)
                      .|.+..++ .+|+.+. ...|+..++.......... .......++|.+.+..|+.. ...+.|..+++..+.....+ .
T Consensus        80 ~C~~~~~~-~~l~~~~-~~~I~~i~~~~~~~~~~~~-~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~-~  155 (386)
T 3v65_B           80 SCKALGPE-PVLLFAN-RIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV-S  155 (386)
T ss_dssp             CEEECSSC-CEEEEEC-BSCEEEECTTSCCCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEE-C
T ss_pred             eECCcccc-ceeEeec-CccceeeccCCCcEEEEec-CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEE-e
Confidence            45555553 3555444 4678888887655433333 33456789999866666654 45688999998876654444 2


Q ss_pred             CCCCCeEEEEEcCCCCE-EEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeC-C-CcEEEEEcc
Q psy17610        207 AHNRGVTALAITQDGTR-LLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST-D-GTCVLWDLI  283 (515)
Q Consensus       207 ~~~~~v~~~~~~~~~~~-l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-~~i~iwd~~  283 (515)
                      ........+++.+.+.. .++-...+.|.+.+++....  .............++++|.+..|+.+.. . +.|...++.
T Consensus       156 ~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~--~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~d  233 (386)
T 3v65_B          156 TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR--KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD  233 (386)
T ss_dssp             SSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSC--EEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred             CCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCce--EEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCC
Confidence            23334567889875444 45555667888888753322  2222333356789999987776665544 3 678888876


Q ss_pred             cceEEEEEEc-CccEEEEEEcCCCcEEEEEE-CCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeE
Q psy17610        284 KSTRLIIMIL-PSMIMSAAYHPSEVQLITCS-TNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIV  361 (515)
Q Consensus       284 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i  361 (515)
                      .......... -.....++++|++..|+.+. ..+.|..+|+........+... ......+++ ..+.++++-...+.|
T Consensus       234 G~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~-~~~P~giav-~~~~ly~td~~~~~V  311 (386)
T 3v65_B          234 GSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQG-LPHPFAITV-FEDSLYWTDWHTKSI  311 (386)
T ss_dssp             SCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSS-CSSEEEEEE-ETTEEEEEETTTTEE
T ss_pred             CCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECC-CCCceEEEE-ECCEEEEeeCCCCeE
Confidence            5433333322 23578999998777766655 4678999998654333333322 245677888 445666666777888


Q ss_pred             EEEEccCCeeeeecc
Q psy17610        362 KMWMYREGVPCFVGI  376 (515)
Q Consensus       362 ~i~d~~~~~~~~~~~  376 (515)
                      ..++..+++....+.
T Consensus       312 ~~~~~~~G~~~~~i~  326 (386)
T 3v65_B          312 NSANKFTGKNQEIIR  326 (386)
T ss_dssp             EEEETTTCCSCEEEE
T ss_pred             EEEECCCCcceEEEc
Confidence            888866666555543

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=98.73  E-value=5.5e-05  Score=67.03  Aligned_cols=233  Identities=9%  Similarity=-0.040  Sum_probs=142.2

Q ss_pred             EEEEEecCCcEEEEeCCCCc-eeEEEEecCeEEEEEEEeeCCCEEEEE-eCCCeEEEEecCCCceEEEecCCCCCCeEEE
Q psy17610        138 SVFATCSKNDIRIWSVRTLN-ELLRISVMNMICACIVFTYDGKAILSG-WNDGFIRCFTPQSGKLKFIIPNAHNRGVTAL  215 (515)
Q Consensus       138 ~l~~~~~d~~i~iw~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~  215 (515)
                      +|+.+. ...|+..+++... ....+.........+.|.+.+..|... ...+.|..+++..+.....+....-.....+
T Consensus         6 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~gl   84 (318)
T 3sov_A            6 LLLYAN-RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGL   84 (318)
T ss_dssp             EEEEEC-EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEE
T ss_pred             EEEEEc-cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEE
Confidence            444443 4678899988764 222222223356689999866655544 4567899999877642111111222346688


Q ss_pred             EEcCC-CCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeC--CCcEEEEEcccceEEEEEE
Q psy17610        216 AITQD-GTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST--DGTCVLWDLIKSTRLIIMI  292 (515)
Q Consensus       216 ~~~~~-~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~  292 (515)
                      ++.+. +.+.++-...+.|.+++++......  ...........+++.|.+..++.+..  .+.|...++..........
T Consensus        85 avd~~~g~ly~~d~~~~~I~~~~~dG~~~~~--l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~  162 (318)
T 3sov_A           85 ACDWLGEKLYWTDSETNRIEVSNLDGSLRKV--LFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIIN  162 (318)
T ss_dssp             EEETTTTEEEEEETTTTEEEEEETTSCSCEE--EECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEEC
T ss_pred             EEEcCCCeEEEEECCCCEEEEEECCCCcEEE--EEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEE
Confidence            99874 4445555667889999986332222  22233455689999997666666653  5778888875433222222


Q ss_pred             c-CccEEEEEEcCCCcEEEEEE-CCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCe
Q psy17610        293 L-PSMIMSAAYHPSEVQLITCS-TNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGV  370 (515)
Q Consensus       293 ~-~~~~~~~~~~~~~~~l~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~  370 (515)
                      . -.....++++|++..|+.+. ..+.|..+|+..... +.+..........+++.. +.++.+-...+.|..++..+++
T Consensus       163 ~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~-~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G~  240 (318)
T 3sov_A          163 SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNR-QAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNKYTGE  240 (318)
T ss_dssp             SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCC
T ss_pred             CCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCce-EEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEECCCCC
Confidence            2 23578999999777776665 467899999864333 333222224566777753 4556666667889989887776


Q ss_pred             eeeec
Q psy17610        371 PCFVG  375 (515)
Q Consensus       371 ~~~~~  375 (515)
                      ....+
T Consensus       241 ~~~~i  245 (318)
T 3sov_A          241 GLREI  245 (318)
T ss_dssp             SCEEE
T ss_pred             ceEEE
Confidence            54444

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.68  E-value=0.00021  Score=65.71  Aligned_cols=234  Identities=11%  Similarity=-0.002  Sum_probs=146.3

Q ss_pred             EEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEe-CCCeEEEEecCCC----ceEEEecCCCCCCe
Q psy17610        138 SVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGW-NDGFIRCFTPQSG----KLKFIIPNAHNRGV  212 (515)
Q Consensus       138 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~~~~~~----~~~~~~~~~~~~~v  212 (515)
                      +|+.+ ....|+..++........+ .....+..++|++.+..|+.+. ..+.|..+++...    .....+ .......
T Consensus        85 ~ll~~-~~~~I~~i~l~~~~~~~~~-~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~-~~~~~~p  161 (400)
T 3p5b_L           85 YLFFT-NRHEVRKMTLDRSEYTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI-SRDIQAP  161 (400)
T ss_dssp             EEEEE-ETTEEEEECTTSCSCEEEE-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEE-CSSCSCE
T ss_pred             eeEEe-ccceeEEEccCCcceeEec-cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEE-eCCCCCc
Confidence            44444 4578888898866544433 3445678899998776666554 5678988988752    222223 3344567


Q ss_pred             EEEEEcC-CCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeC--CCcEEEEEcccceEEE
Q psy17610        213 TALAITQ-DGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST--DGTCVLWDLIKSTRLI  289 (515)
Q Consensus       213 ~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~  289 (515)
                      ..+++.+ .+++.++-...+.|.+.+++....  ...+.........++++|.+..|+.+..  .+.|...++.......
T Consensus       162 ~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~--~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~  239 (400)
T 3p5b_L          162 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR--KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS  239 (400)
T ss_dssp             EEEEEETTTTEEEEEETTTTEEEEECTTTCSE--EEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEE
T ss_pred             ccEEEEecCCceEEEECCCCeEEEEeCCCCce--EEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEE
Confidence            8999998 454555556678899998853322  2222333445789999997776666553  3678888886544333


Q ss_pred             EEEcC-ccEEEEEEcCCCcEEEEEEC-CCeEEEEeCCCCceEEEEecC-CCccEEEEEEcCCCCEEEEEcCCCeEEEEEc
Q psy17610        290 IMILP-SMIMSAAYHPSEVQLITCST-NKMIDYWETCDGSIIRSLEGS-DVAAVNCVDFVDDGKYFLTGGADQIVKMWMY  366 (515)
Q Consensus       290 ~~~~~-~~~~~~~~~~~~~~l~~~~~-~~~i~~~d~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~  366 (515)
                      ..... .....+++++++..|+.+.. .+.|..+|+............ .......+++. .+.++++-...+.|..+|.
T Consensus       240 ~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~  318 (400)
T 3p5b_L          240 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANR  318 (400)
T ss_dssp             EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEES
T ss_pred             EEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEc
Confidence            33322 46789999998877776654 678999998654433333321 12345567763 3455666666778888887


Q ss_pred             cCCeeeeeccC
Q psy17610        367 REGVPCFVGIG  377 (515)
Q Consensus       367 ~~~~~~~~~~~  377 (515)
                      .+++.+..+..
T Consensus       319 ~~G~~~~~i~~  329 (400)
T 3p5b_L          319 LTGSDVNLLAE  329 (400)
T ss_dssp             SSCCCCEEEEC
T ss_pred             CCCCceEEEec
Confidence            77766555543

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=98.68  E-value=5.4e-05  Score=67.06  Aligned_cols=234  Identities=9%  Similarity=0.035  Sum_probs=143.1

Q ss_pred             EEEEEecCceEEEEECCCCc-eeEEeeccCccCeEEEEeCCCCcEEEEEec-CCcEEEEeCCCCcee-EEEEecCeEEEE
Q psy17610         95 KVFVGTVNCEIFLIDMNSGF-TLTLVNTCHTSAIYDLQFPVNFSSVFATCS-KNDIRIWSVRTLNEL-LRISVMNMICAC  171 (515)
Q Consensus        95 ~l~~~~~d~~i~iw~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~~-~~~~~~~~~v~~  171 (515)
                      +|+.+. ...|+..+++... ....... .......++|++.+..|+.+.. .+.|..+++..+... ..+...-.....
T Consensus         6 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~-~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~g   83 (318)
T 3sov_A            6 LLLYAN-RRDLRLVDATNGKENATIVVG-GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDG   83 (318)
T ss_dssp             EEEEEC-EEEEEEEETTCTTSCCEEEEE-EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCE
T ss_pred             EEEEEc-cCeEEEEECCCCceEEEEEec-CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccE
Confidence            455544 4579999998753 2222222 2345678999986666666654 778999998766422 222222234567


Q ss_pred             EEEeeCCCEEE-EEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEec--CCCcEEEEEccCCceeeEEe
Q psy17610        172 IVFTYDGKAIL-SGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGG--GEGQVRIWKLTRESQSLQCV  248 (515)
Q Consensus       172 ~~~~~~~~~l~-~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~iw~~~~~~~~~~~~  248 (515)
                      +++.+.+..|+ +-...+.|.+++++........ .........+++.|.+..|+...  ..+.|...+++.....  ..
T Consensus        84 lavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~-~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~--~~  160 (318)
T 3sov_A           84 LACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLF-WQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF--II  160 (318)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-CSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCE--EE
T ss_pred             EEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEE-eCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeE--EE
Confidence            88887555554 4455678999998765443333 34445678999998666665554  3577888887532221  11


Q ss_pred             eccccCceEEEEEecCCCEEEEEe-CCCcEEEEEcccceEEEEEE-cCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCC
Q psy17610        249 LKEHTSSVSVIQIKSDSKEAMSAS-TDGTCVLWDLIKSTRLIIMI-LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDG  326 (515)
Q Consensus       249 ~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~  326 (515)
                      ....-.....+++++++..|+.+. ..+.|..+|+.......... .......+++.. +..+.+-...+.|..++..++
T Consensus       161 ~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G  239 (318)
T 3sov_A          161 INSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNKYTG  239 (318)
T ss_dssp             ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEETTTC
T ss_pred             EECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEECCCC
Confidence            222234568899999777766654 45789999986433332222 223456677653 344445555778888888777


Q ss_pred             ceEEEEec
Q psy17610        327 SIIRSLEG  334 (515)
Q Consensus       327 ~~~~~~~~  334 (515)
                      +....+..
T Consensus       240 ~~~~~i~~  247 (318)
T 3sov_A          240 EGLREIHS  247 (318)
T ss_dssp             CSCEEEEC
T ss_pred             CceEEEeC
Confidence            76655544

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=98.67  E-value=5.3e-05  Score=70.46  Aligned_cols=253  Identities=10%  Similarity=0.032  Sum_probs=142.7

Q ss_pred             ceEEEEEec-CCCEEEEEe-CCCcEEEEEcccceEEEEEEcCc----cEEEEEE-------cCCCcEEEEEECCC-----
Q psy17610        255 SVSVIQIKS-DSKEAMSAS-TDGTCVLWDLIKSTRLIIMILPS----MIMSAAY-------HPSEVQLITCSTNK-----  316 (515)
Q Consensus       255 ~v~~~~~~~-~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~----~~~~~~~-------~~~~~~l~~~~~~~-----  316 (515)
                      ....|+|+| +...|+.+. ..+.|++.|+..+..........    ....++|       ++++..|+++...+     
T Consensus       140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~  219 (496)
T 3kya_A          140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE  219 (496)
T ss_dssp             SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred             CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence            457889998 344444444 34678889988877666554432    4889999       99999777776654     


Q ss_pred             --eEEEEeCCC-CceE-----EEEecCCCccEEEEEEcC-CCCEEEEEcCCCeEEEEEcc-------CCee---------
Q psy17610        317 --MIDYWETCD-GSII-----RSLEGSDVAAVNCVDFVD-DGKYFLTGGADQIVKMWMYR-------EGVP---------  371 (515)
Q Consensus       317 --~i~~~d~~~-~~~~-----~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~-------~~~~---------  371 (515)
                        .+.+++... +...     ..+...  .....++++| ++.++++-..++.|..+|+.       ++..         
T Consensus       220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~--~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~  297 (496)
T 3kya_A          220 SPSVYIIKRNADGTFDDRSDIQLIAAY--KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNP  297 (496)
T ss_dssp             EEEEEEEECCTTSCCSTTSCEEEEEEE--SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCT
T ss_pred             CceEEEEecCCCCceeecccceeeccC--CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccc
Confidence              366665433 1221     222211  2345778999 56666677788899999997       4443         


Q ss_pred             -----eeeccCCCCCeeEEEECCCCcEEEEE-eCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEE
Q psy17610        372 -----CFVGIGHAASITKIKISPDKKVIVSV-SADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIM  445 (515)
Q Consensus       372 -----~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  445 (515)
                           +... +.......++|+|++++|..+ .....|+.++.............+............... ...-....
T Consensus       298 g~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~-~a~f~~P~  375 (496)
T 3kya_A          298 NTFKQLFTI-ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGT-EARMNNPC  375 (496)
T ss_dssp             TTEEEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGG-GCBCSSEE
T ss_pred             cccceeEec-CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCccc-ccccCCCe
Confidence                 1112 223446799999999965555 456678876654321110000000000000000000000 00001133


Q ss_pred             -Eeeec-------cCCcEEEEeecCCeEEEEecCCCeeeeeeccc-----------------------ccceEEEEEEcC
Q psy17610        446 -SAAYH-------PSEVQLITCSTNKMIDYWETCDGSIIRSLEGS-----------------------DVAAVNCVDFVD  494 (515)
Q Consensus       446 -~~~~s-------~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~-----------------------~~~~v~~~~~s~  494 (515)
                       .++..       +++.+.++=..+..|+.++ .+|.. .++.+.                       .......|++++
T Consensus       376 ~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~v-~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~  453 (496)
T 3kya_A          376 QGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGIV-STYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDD  453 (496)
T ss_dssp             EEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCBE-EEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEET
T ss_pred             EEEEEccccccccCCCeEEEEECCCCEEEEEe-CCCCE-EEEecccccccccCccccccCCCCchhhhhcCCCcEEEEEC
Confidence             34443       4566666666778899998 45643 333221                       013467899999


Q ss_pred             C-CcEEEEeecCCeEEEEEE
Q psy17610        495 D-GKYFLTGGADQIVKICLY  513 (515)
Q Consensus       495 ~-~~~l~s~~~dg~v~iw~~  513 (515)
                      + |.+.++=..+..||.++.
T Consensus       454 ~~g~lyVaD~~N~rIrki~~  473 (496)
T 3kya_A          454 VKEMFYVHDQVGHTIRTISM  473 (496)
T ss_dssp             TTTEEEEEETTTTEEEEEEE
T ss_pred             CCCEEEEEeCCCCEEEEEEC
Confidence            7 776666566788888764

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=98.67  E-value=2.6e-05  Score=68.32  Aligned_cols=194  Identities=13%  Similarity=0.213  Sum_probs=129.9

Q ss_pred             CCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCC----CCE--EE--EecC--CCcEEEEEccCCceeeE
Q psy17610        177 DGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQD----GTR--LL--SGGG--EGQVRIWKLTRESQSLQ  246 (515)
Q Consensus       177 ~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~--l~--~~~~--d~~i~iw~~~~~~~~~~  246 (515)
                      ....++.....+-+.+||+ +|+.+..+..   +.++.+..-|+    |+.  ++  +.-.  +++|.+|+++..... .
T Consensus        39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~---g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l  113 (355)
T 3amr_A           39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT---GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-L  113 (355)
T ss_dssp             GGCEEEEEETTTEEEEEET-TSCEEEEECC---SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-E
T ss_pred             CccEEEEEcCCCCEEEEcC-CCcEEEEccC---CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-e
Confidence            3456666677888999999 7888887732   45666666552    222  23  3333  578999987533322 2


Q ss_pred             Eeec-------cccCceEEEEE--ecC-CC-EEEEEeCCCcEEEEEc-------ccceEEEEEEcCccEEEEEEcCCCcE
Q psy17610        247 CVLK-------EHTSSVSVIQI--KSD-SK-EAMSASTDGTCVLWDL-------IKSTRLIIMILPSMIMSAAYHPSEVQ  308 (515)
Q Consensus       247 ~~~~-------~~~~~v~~~~~--~~~-~~-~l~~~~~d~~i~iwd~-------~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (515)
                      ..+.       .....+..+++  +|. ++ +++....+|.+..|++       .+.+.++.+...+.+..+...+....
T Consensus       114 ~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~  193 (355)
T 3amr_A          114 QSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGR  193 (355)
T ss_dssp             EECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTE
T ss_pred             eeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCe
Confidence            2221       11145666777  664 43 5788888999999998       35577888899999999999999999


Q ss_pred             EEEEECCCeEEEEeCC-----CCceEEEEecC-CCccEEEEEE--cCCCC-EEEEEc-CCCeEEEEEcc-CCeeeeec
Q psy17610        309 LITCSTNKMIDYWETC-----DGSIIRSLEGS-DVAAVNCVDF--VDDGK-YFLTGG-ADQIVKMWMYR-EGVPCFVG  375 (515)
Q Consensus       309 l~~~~~~~~i~~~d~~-----~~~~~~~~~~~-~~~~i~~~~~--~~~~~-~l~~~~-~dg~i~i~d~~-~~~~~~~~  375 (515)
                      |+++-++..|..++..     +++.+..+... -...+..|++  .++++ +|++.+ .++...+||.+ +.+.+..+
T Consensus       194 Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f  271 (355)
T 3amr_A          194 LYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADF  271 (355)
T ss_dssp             EEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEE
T ss_pred             EEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEE
Confidence            9999999888888855     34455444322 2236777877  45555 666655 56799999996 44444444

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=98.56  E-value=0.00016  Score=67.33  Aligned_cols=245  Identities=9%  Similarity=0.015  Sum_probs=141.7

Q ss_pred             cEEEEEEec-CCCEEEEEec-CceEEEEECCCCceeEEeeccC---ccCeEEEEe-------CCCCcEEEEEecCC----
Q psy17610         83 GISSLQYNP-VNNKVFVGTV-NCEIFLIDMNSGFTLTLVNTCH---TSAIYDLQF-------PVNFSSVFATCSKN----  146 (515)
Q Consensus        83 ~v~~~~~s~-~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~h---~~~v~~~~~-------~~~~~~l~~~~~d~----  146 (515)
                      ....|+|+| ++..|+++.. .+.|++.|.+++ .+..+....   ......++|       ++++.+|+++...+    
T Consensus       140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~-~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~  218 (496)
T 3kya_A          140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNR-MLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGD  218 (496)
T ss_dssp             SEEEEEEETTEEEEEEEEEETEEEEEEEETTTT-EEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGG
T ss_pred             CCCEEEEccCCCCEEEEEECCCCeEEEEECCCC-EEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcc
Confidence            467899999 4555555544 478999999884 444443322   235889999       99998788877643    


Q ss_pred             ---cEEEEeCCC-Ccee-----EEEEecCeEEEEEEEeeC-CCEEEEEeCCCeEEEEecC-------CCce---------
Q psy17610        147 ---DIRIWSVRT-LNEL-----LRISVMNMICACIVFTYD-GKAILSGWNDGFIRCFTPQ-------SGKL---------  200 (515)
Q Consensus       147 ---~i~iw~~~~-~~~~-----~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~~~~~~-------~~~~---------  200 (515)
                         .|.+.+... ++..     ..+.... ....++++|+ +.++++-..++.|..+|+.       ++..         
T Consensus       219 ~~~~V~~i~r~~~G~~~~~~~~~~v~~~~-~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~  297 (496)
T 3kya_A          219 ESPSVYIIKRNADGTFDDRSDIQLIAAYK-QCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNP  297 (496)
T ss_dssp             GEEEEEEEECCTTSCCSTTSCEEEEEEES-CCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCT
T ss_pred             cCceEEEEecCCCCceeecccceeeccCC-CceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccc
Confidence               255665443 2221     2333222 3356788995 4555556677889999987       5543         


Q ss_pred             --EEE-ecCCCCCCeEEEEEcCCCCEEE-EecCCCcEEEEEccCCceee--EEeeccc---c------------CceE-E
Q psy17610        201 --KFI-IPNAHNRGVTALAITQDGTRLL-SGGGEGQVRIWKLTRESQSL--QCVLKEH---T------------SSVS-V  258 (515)
Q Consensus       201 --~~~-~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~iw~~~~~~~~~--~~~~~~~---~------------~~v~-~  258 (515)
                        ... +..+.......++|+|+|+.|. +-...+.|+.++.+......  ...+.+.   .            .... .
T Consensus       298 g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~g  377 (496)
T 3kya_A          298 NTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQG  377 (496)
T ss_dssp             TTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEE
T ss_pred             cccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEE
Confidence              111 2223344568999999999544 44567888887765332211  0111111   0            1233 3


Q ss_pred             EEEe-------cCCCEEEEEeCCCcEEEEEcccceEEEEEEc---------------C---------ccEEEEEEcCC-C
Q psy17610        259 IQIK-------SDSKEAMSASTDGTCVLWDLIKSTRLIIMIL---------------P---------SMIMSAAYHPS-E  306 (515)
Q Consensus       259 ~~~~-------~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~---------------~---------~~~~~~~~~~~-~  306 (515)
                      +...       +++.++++=.....|+.++ .++........               .         .....+++.++ +
T Consensus       378 v~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g  456 (496)
T 3kya_A          378 VFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKE  456 (496)
T ss_dssp             EEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTT
T ss_pred             EEEccccccccCCCeEEEEECCCCEEEEEe-CCCCEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCC
Confidence            4444       4555555556677888888 34543332221               0         12567788876 5


Q ss_pred             cEEEEEECCCeEEEEeCCCCceEE
Q psy17610        307 VQLITCSTNKMIDYWETCDGSIIR  330 (515)
Q Consensus       307 ~~l~~~~~~~~i~~~d~~~~~~~~  330 (515)
                      ..+++=..+..|+.+++.......
T Consensus       457 ~lyVaD~~N~rIrki~~~~~~~~~  480 (496)
T 3kya_A          457 MFYVHDQVGHTIRTISMEQEENVA  480 (496)
T ss_dssp             EEEEEETTTTEEEEEEECCCC---
T ss_pred             EEEEEeCCCCEEEEEECCCCcccc
Confidence            555555556677777766554443

>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A

Probab=98.45  E-value=0.0019  Score=65.19  Aligned_cols=400  Identities=10%  Similarity=0.013  Sum_probs=220.8

Q ss_pred             CCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEee-ccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCcee
Q psy17610         81 DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVN-TCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNEL  159 (515)
Q Consensus        81 ~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~  159 (515)
                      ...|.++.-..+|. |..|+.+| +..||-.. ....... ......|.++...+++ .|..++.+| +..+|..+.+..
T Consensus        21 ~n~V~~I~qD~~G~-lWigT~~G-L~ryDG~~-~~~~~~~~~~~~~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~   95 (758)
T 3ott_A           21 ASVVSCFLQDSEGL-IWIGSNKG-LFSYDGYS-TQQHFTYGENNNTRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYE   95 (758)
T ss_dssp             CCCEEEEEECTTSC-EEEEESSC-EEEECSSC-EEECSCTTSTTSSCEEEEEEETTT-EEEEEETTE-EEEEETTTTEEC
T ss_pred             cceEEEEEECCCCC-EEEEECCC-ccccCCCc-eEEEEccCCCCCceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEE
Confidence            56799999988775 66777776 66777543 1111000 1123468888877776 566666554 788998765432


Q ss_pred             EEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEec---CCCCCCeEEEEEcCCCCEEEEecCCCcEEEE
Q psy17610        160 LRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIP---NAHNRGVTALAITQDGTRLLSGGGEGQVRIW  236 (515)
Q Consensus       160 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw  236 (515)
                      .........|.++.. .++ .|..++.+ -+..+|..+++......   ......|.++...+++.+.+ |+.+ -+..+
T Consensus        96 ~~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~  170 (758)
T 3ott_A           96 QPETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRY  170 (758)
T ss_dssp             CCSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEE-EETT-EEEEE
T ss_pred             CcccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhC
Confidence            110111224666543 454 56667666 58888987766543211   11235688888888887555 4444 47778


Q ss_pred             EccCCceeeEEeecc----ccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEE-cCccEEEEEEcCCCcEEEE
Q psy17610        237 KLTRESQSLQCVLKE----HTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMI-LPSMIMSAAYHPSEVQLIT  311 (515)
Q Consensus       237 ~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~  311 (515)
                      +......... ....    ....|.++...+++..|..++. +-+..+|..+++...... ....+.++...+++...+.
T Consensus       171 ~~~~~~~~~~-~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWig  248 (758)
T 3ott_A          171 IPSNGKFEGI-PLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAG  248 (758)
T ss_dssp             ETTTTEEEEE-CCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEE
T ss_pred             ccCCCceEEe-cCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEE
Confidence            7643322111 1111    1224778877777776666664 458888887665432221 2235778888877776655


Q ss_pred             EECCCeEEEEeCCCCceEEEEec------CCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeecc-----CCCC
Q psy17610        312 CSTNKMIDYWETCDGSIIRSLEG------SDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGI-----GHAA  380 (515)
Q Consensus       312 ~~~~~~i~~~d~~~~~~~~~~~~------~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-----~~~~  380 (515)
                      . . +-+.+++..+++...-...      -....|.++....+|. |-.|+..| +.++............     ....
T Consensus       249 T-~-~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWiGT~~G-l~~~~~~~~~~~~~~~~~~~~~~~~  324 (758)
T 3ott_A          249 T-D-NGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHN-IWLGTDYG-ISLSRYNSALQFIPISQITGTGDGN  324 (758)
T ss_dssp             E-T-TEEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCC-EEEEESSS-EEEECCCC-CEEEEHHHHSCSCCCC
T ss_pred             e-C-CceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCC-EEEEeCCc-ccccccCCceeEEecccCCCCCCCc
Confidence            4 4 4578888776654322111      1124588888888776 44555566 4444332211111110     1234


Q ss_pred             CeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEee
Q psy17610        381 SITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCS  460 (515)
Q Consensus       381 ~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~  460 (515)
                      .|.++.-.++|.+.+ |+.+| +..++........     ... . .....  .  .......|.++.-.++|++.+ |+
T Consensus       325 ~v~~i~~D~~g~lWi-Gt~~G-l~~~~~~~~~~~~-----~~~-~-~~~~~--~--~~l~~~~v~~i~~d~~g~lWi-gt  390 (758)
T 3ott_A          325 QFYSLFRDSKGFYWF-GGANG-LIRFTDPAGERHD-----AIW-Y-RMGDK--T--YPLSHNRIRHIYEDKEQQLWI-AT  390 (758)
T ss_dssp             BEEEEEECTTCCEEE-EETTE-EEEESCTTSSCCC-----CEE-E-CTTCS--S--SCCSCSCEEEEEECTTSCEEE-EE
T ss_pred             eEEEEEEcCCCCEEE-eeCCc-ceeecccccccce-----eEE-e-ccCCc--C--CCCCCCceEEEEECCCCCEEE-Ee
Confidence            688888888887655 44554 6666654321100     000 0 00000  0  001123478888888887554 34


Q ss_pred             cCCeEEEEecCCCeeeeeec-cc----ccceEEEEEEcCCCcEEEEeecCCeEEEEE
Q psy17610        461 TNKMIDYWETCDGSIIRSLE-GS----DVAAVNCVDFVDDGKYFLTGGADQIVKICL  512 (515)
Q Consensus       461 ~dg~v~iwd~~~~~~~~~~~-~~----~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~  512 (515)
                       ++-+..||..+++...-.. ..    ....|.++...++|++.+ |+..+-+.+++
T Consensus       391 -~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gT~~~Gl~~~~  445 (758)
T 3ott_A          391 -DGSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWI-STCLGGIFVVD  445 (758)
T ss_dssp             -TTEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEE-EESSSCEEEEE
T ss_pred             -CCcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEE-EECCCceEEEc
Confidence             3469999988776543211 11    114688888888887555 44443355554

>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A

Probab=98.45  E-value=0.0019  Score=65.15  Aligned_cols=391  Identities=13%  Similarity=0.035  Sum_probs=213.1

Q ss_pred             CcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEE
Q psy17610         82 SGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLR  161 (515)
Q Consensus        82 ~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~  161 (515)
                      ..|.++...+++..|..|+. +-+..+|..++. ......-....|.++...++|...+. +. +-+.+++..+++. ..
T Consensus       191 ~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~-~~~~~~l~~~~i~~i~~d~~g~lWig-T~-~Gl~~~~~~~~~~-~~  265 (758)
T 3ott_A          191 LFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQ-IKQTEAFHNNSIKSLALDGNGDLLAG-TD-NGLYVYHNDTTPL-QH  265 (758)
T ss_dssp             CCEEEEEEETTTTEEEEEEE-EEEEEEETTTTE-EEEEEEEEEEEEEEEEECTTCCEEEE-ET-TEEEEECCTTSCC-EE
T ss_pred             ceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCe-EEeccCCCCCeEEEEEEcCCCCEEEE-eC-CceeEEecCCCcE-EE
Confidence            34889988888877777775 458889987743 32221113346888888888755544 44 4588888776543 22


Q ss_pred             EEe--------cCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEec----CCCCCCeEEEEEcCCCCEEEEecC
Q psy17610        162 ISV--------MNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIP----NAHNRGVTALAITQDGTRLLSGGG  229 (515)
Q Consensus       162 ~~~--------~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~  229 (515)
                      +..        ....|.++....+|. |-.|+..| +.++.....-......    ......|.++.-.++|.+-+ |+.
T Consensus       266 ~~~~~~~~~~l~~~~i~~i~~D~~g~-lWiGT~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWi-Gt~  342 (758)
T 3ott_A          266 IIHDSRNIQSLTNNIIWNIFADQEHN-IWLGTDYG-ISLSRYNSALQFIPISQITGTGDGNQFYSLFRDSKGFYWF-GGA  342 (758)
T ss_dssp             ECCCTTCTTSCSCSCEEEEEECTTCC-EEEEESSS-EEEECCCC-CEEEEHHHHSCSCCCCBEEEEEECTTCCEEE-EET
T ss_pred             EEcCCCCcCcCCcCeEEEEEEcCCCC-EEEEeCCc-ccccccCCceeEEecccCCCCCCCceEEEEEEcCCCCEEE-eeC
Confidence            221        123588887777776 55566667 5444332211111110    11234688888888887554 455


Q ss_pred             CCcEEEEEccCCceeeEEeec-------cccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEE-------cCc
Q psy17610        230 EGQVRIWKLTRESQSLQCVLK-------EHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMI-------LPS  295 (515)
Q Consensus       230 d~~i~iw~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-------~~~  295 (515)
                      +| +..++...........+.       -....|.++.-.+++.. ..|+ ++-+..+|..+++......       ...
T Consensus       343 ~G-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~l-Wigt-~~GL~~~~~~~~~~~~~~~~~~~~~~~~~  419 (758)
T 3ott_A          343 NG-LIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQL-WIAT-DGSINRYDYATRQFIHYNIVDNTGTYNTN  419 (758)
T ss_dssp             TE-EEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSCE-EEEE-TTEEEEEETTTTEEEEEEEECCC--CBSS
T ss_pred             Cc-ceeecccccccceeEEeccCCcCCCCCCCceEEEEECCCCCE-EEEe-CCcHhhcCcCCCcEEEeecCCCcCCCCCc
Confidence            55 555654321111111111       01235788877777664 4455 4568999987765443321       112


Q ss_pred             cEEEEEEcCCCcEEEEEECCCeEEEEeCCCC-----ceE---EEEec---CCCccEEEEEEcCCCCEEEEEcCCCeEEEE
Q psy17610        296 MIMSAAYHPSEVQLITCSTNKMIDYWETCDG-----SII---RSLEG---SDVAAVNCVDFVDDGKYFLTGGADQIVKMW  364 (515)
Q Consensus       296 ~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~-----~~~---~~~~~---~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~  364 (515)
                      .+.++...+++... .|+..+-+..+|..+.     ...   ..+..   .....|.++...++|++-+.++..+-+..+
T Consensus       420 ~v~~i~~d~~g~lW-igT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~~~t~~Gl~~~  498 (758)
T 3ott_A          420 WTYYIFEDTAGQLW-ISTCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDNEGNVWVLLYNNKGIDKI  498 (758)
T ss_dssp             SEEEEEECTTSEEE-EEESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEEEEECTTSCEEEEETTCSSEEEE
T ss_pred             eEEEEEEcCCCCEE-EEECCCceEEEccccccccCCcceecccccccccccccceeeeEEEcCCCCEEEEccCCCCcEEE
Confidence            47777777776644 4666666788875421     111   11111   112358889999888866533333447788


Q ss_pred             EccCCeeeeeccC---CCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCc
Q psy17610        365 MYREGVPCFVGIG---HAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILP  441 (515)
Q Consensus       365 d~~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  441 (515)
                      |..+++.......   ....+.++....+|.+.+. +.. -+..++.............                  ...
T Consensus       499 d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWig-t~~-Gl~~~~~~~~~~~~~~~~g------------------l~~  558 (758)
T 3ott_A          499 NPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVG-FHG-GVMRINPKDESQQSISFGS------------------FSN  558 (758)
T ss_dssp             ETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEE-ETT-EEEEECC--CCCCBCCCCC---------------------
T ss_pred             eCCCCceEEecCCCcCCCcccceEEECCCCCEEEE-ecC-ceEEEecCCCceEEecccC------------------CCc
Confidence            9877654432111   1346788888888876654 444 4778876543211100000                  011


Q ss_pred             ccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEE-cCCCcEEEEeecCCeEEE
Q psy17610        442 SMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDF-VDDGKYFLTGGADQIVKI  510 (515)
Q Consensus       442 ~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~-s~~~~~l~s~~~dg~v~i  510 (515)
                      ..|.++... +|. |-.++.+| +..+|..+.+... +.... ..+....+ .++|+ |..|+.+|.+.+
T Consensus       559 ~~i~~i~~~-~g~-lWi~t~~G-l~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~G~-l~fG~~~Gl~~f  622 (758)
T 3ott_A          559 NEILSMTCV-KNS-IWVSTTNG-LWIIDRKTMDARQ-QNMTN-KRFTSLLFDPKEDC-VYLGGADGFGIS  622 (758)
T ss_dssp             CCEEEEEEE-TTE-EEEEESSC-EEEEETTTCCEEE-C--CC-CCCSEEEEETTTTE-EEEECBSEEEEE
T ss_pred             cceEEEEEC-CCC-EEEECCCC-eEEEcCCCceeEE-ecCCC-CceeeeEEECCCCc-EEEecCCceEEE
Confidence            236666653 554 44455566 7788887765432 11111 22333444 35665 556777885543

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=98.41  E-value=0.00035  Score=61.27  Aligned_cols=194  Identities=15%  Similarity=0.153  Sum_probs=125.5

Q ss_pred             CCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeC----CCE--EE-EEeC---CCeEEEEec--CCCceEE
Q psy17610        135 NFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYD----GKA--IL-SGWN---DGFIRCFTP--QSGKLKF  202 (515)
Q Consensus       135 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~--l~-~~~~---dg~i~~~~~--~~~~~~~  202 (515)
                      ....++.+...+-+.++|+ +|+.++.+..  +.+..+..-|+    |+.  ++ +...   +++|.+|++  .+++ +.
T Consensus        39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~  114 (355)
T 3amr_A           39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQ  114 (355)
T ss_dssp             GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EE
T ss_pred             CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-ee
Confidence            3356677777889999999 8898888753  44566665552    322  33 3333   578999966  4444 33


Q ss_pred             EecC---C--CC-CCeEEEEE--cCC-CC-EEEEecCCCcEEEEEccCC-----ceeeEEeeccccCceEEEEEecCCCE
Q psy17610        203 IIPN---A--HN-RGVTALAI--TQD-GT-RLLSGGGEGQVRIWKLTRE-----SQSLQCVLKEHTSSVSVIQIKSDSKE  267 (515)
Q Consensus       203 ~~~~---~--~~-~~v~~~~~--~~~-~~-~l~~~~~d~~i~iw~~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~  267 (515)
                      .+..   +  .. ..+..+++  +|. +. ++++...+|.+..|++...     +.+.+..+.. .+.+..+...+....
T Consensus       115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~  193 (355)
T 3amr_A          115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGR  193 (355)
T ss_dssp             ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTE
T ss_pred             eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCe
Confidence            3311   1  11 45666777  774 43 6778888899999998431     2344445443 457888899998999


Q ss_pred             EEEEeCCCcEEEEEcc-----cceEEEEEEcC---ccEEEEEE--cCCCc-EEEEEE-CCCeEEEEeCC-CCceEEEEe
Q psy17610        268 AMSASTDGTCVLWDLI-----KSTRLIIMILP---SMIMSAAY--HPSEV-QLITCS-TNKMIDYWETC-DGSIIRSLE  333 (515)
Q Consensus       268 l~~~~~d~~i~iwd~~-----~~~~~~~~~~~---~~~~~~~~--~~~~~-~l~~~~-~~~~i~~~d~~-~~~~~~~~~  333 (515)
                      |+.+-++.-|..++.+     +.+.+......   ..+..+++  .++++ +|++++ .+..+.+||.. +.+.+..+.
T Consensus       194 Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~  272 (355)
T 3amr_A          194 LYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFR  272 (355)
T ss_dssp             EEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEE
T ss_pred             EEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEEE
Confidence            9999998766666644     23444444333   35788887  45555 666666 46799999986 555555554

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=98.37  E-value=0.0021  Score=64.25  Aligned_cols=232  Identities=10%  Similarity=0.005  Sum_probs=142.0

Q ss_pred             EEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEE-eCCCeEEEEecCCC----ceEEEecCCCCCCe
Q psy17610        138 SVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSG-WNDGFIRCFTPQSG----KLKFIIPNAHNRGV  212 (515)
Q Consensus       138 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~~~~~~~~----~~~~~~~~~~~~~v  212 (515)
                      +|+.+ ....|+..++...+... +......+..++|.+....|+.. ...+.|+.+++...    .....+ .......
T Consensus       397 ~Ll~a-n~~~Ir~i~l~~~~~~~-l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi-~~~l~~P  473 (791)
T 3m0c_C          397 YLFFT-NRHEVRKMTLDRSEYTS-LIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI-SRDIQAP  473 (791)
T ss_dssp             EEEEE-CBSSEEEECTTSCCCEE-EECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEE-CSSCSCC
T ss_pred             ccccc-cccceeEeeccCCccee-eecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEE-ecCCCCc
Confidence            44443 44668888887654433 33344456789999866655544 45678888888753    222223 3344556


Q ss_pred             EEEEEcCCCCEE-EEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeC-C-CcEEEEEcccceEEE
Q psy17610        213 TALAITQDGTRL-LSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST-D-GTCVLWDLIKSTRLI  289 (515)
Q Consensus       213 ~~~~~~~~~~~l-~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-~~i~iwd~~~~~~~~  289 (515)
                      ..|++.+.++.| ++-...+.|.+.+++.....  ..+.........|++.|.+..|+.+.. . +.|...++.......
T Consensus       474 ~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~--~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~  551 (791)
T 3m0c_C          474 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRK--TLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS  551 (791)
T ss_dssp             CEEEEETTTTEEEEEETTTTEEEEEETTSSSEE--EEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEE
T ss_pred             ceeeeeecCCcEEEEecCCCeEEEEeCCCCeEE--EEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEE
Confidence            789998866544 45556789999998633222  222233445789999998776666653 2 678888886554444


Q ss_pred             EEEcC-ccEEEEEEcCCCcEEEEEEC-CCeEEEEeCCCCceEEEEecC-CCccEEEEEEcCCCCEEEEEcCCCeEEEEEc
Q psy17610        290 IMILP-SMIMSAAYHPSEVQLITCST-NKMIDYWETCDGSIIRSLEGS-DVAAVNCVDFVDDGKYFLTGGADQIVKMWMY  366 (515)
Q Consensus       290 ~~~~~-~~~~~~~~~~~~~~l~~~~~-~~~i~~~d~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~  366 (515)
                      ..... .....+++++.+..|+.+.. .+.|..+++........+... .......|++.. +.++++-...+.|...+.
T Consensus       552 lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I~~~dk  630 (791)
T 3m0c_C          552 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANR  630 (791)
T ss_dssp             EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEET
T ss_pred             EEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeC-CEEEEEECCCCEEEEEeC
Confidence            43332 46889999987777776654 568999998655444444321 113345666643 345555566778888887


Q ss_pred             cCCeeeeec
Q psy17610        367 REGVPCFVG  375 (515)
Q Consensus       367 ~~~~~~~~~  375 (515)
                      .+++.+..+
T Consensus       631 ~tG~~~~~l  639 (791)
T 3m0c_C          631 LTGSDVNLL  639 (791)
T ss_dssp             TTCCCCEEE
T ss_pred             CCCcceEEe
Confidence            777555444

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=98.36  E-value=0.0013  Score=58.99  Aligned_cols=263  Identities=10%  Similarity=0.071  Sum_probs=168.5

Q ss_pred             CCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcE
Q psy17610        229 GEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQ  308 (515)
Q Consensus       229 ~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (515)
                      .+.+|.|.|+..+.........+     .+.-.+|..+.++.-. ..++.++|+++.+.+.....+.++.--.|-.+...
T Consensus        46 ~~~~vvIiDl~~~~~~~rrpi~A-----dsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWis~~~l  119 (494)
T 1bpo_A           46 EQAQVVIIDMNDPSNPIRRPISA-----DSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTV  119 (494)
T ss_dssp             TCCEEEEEETTSTTSCEEEECCC-----SEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEEETTEE
T ss_pred             CCCeEEEEECCCCCcceeccccc-----ceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCCceEEEecCCCeE
Confidence            34478888987554433332222     2344678777666655 67999999999999999999888877777655444


Q ss_pred             EEEEECCCeEEEEeCCCC-ceEEEEecCC---CccEEEEEEcCCCCEEEEEcC-------CCeEEEEEccCCeeeeeccC
Q psy17610        309 LITCSTNKMIDYWETCDG-SIIRSLEGSD---VAAVNCVDFVDDGKYFLTGGA-------DQIVKMWMYREGVPCFVGIG  377 (515)
Q Consensus       309 l~~~~~~~~i~~~d~~~~-~~~~~~~~~~---~~~i~~~~~~~~~~~l~~~~~-------dg~i~i~d~~~~~~~~~~~~  377 (515)
                      -++  .+..++-|++... .+.+.+..+.   ...|.....+++.++++..+-       .|.+.+|..+.+ ..+.+.+
T Consensus       120 ~lV--T~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieG  196 (494)
T 1bpo_A          120 ALV--TDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEG  196 (494)
T ss_dssp             EEE--CSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECC
T ss_pred             EEE--cCCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchhee
Confidence            333  4567999998753 4555665442   256777788999998875432       367889988653 4456677


Q ss_pred             CCCCeeEEEECCC---CcEEEEEeC---CCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeecc
Q psy17610        378 HAASITKIKISPD---KKVIVSVSA---DGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHP  451 (515)
Q Consensus       378 ~~~~i~~~~~~~~---~~~l~~~~~---dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~  451 (515)
                      |...-..+....+   ..+++.+..   .+.+++-++........   .+..+..     ..........+...++..|+
T Consensus       197 haa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~---~f~kk~v-----dv~fppe~~~DFPvamqvs~  268 (494)
T 1bpo_A          197 HAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQ---PFPKKAV-----DVFFPPEAQNDFPVAMQISE  268 (494)
T ss_dssp             SEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCC---CCCCEEE-----ECCCCTTSTTCCEEEEEEET
T ss_pred             eeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCC---Cccceee-----eeeCCcccccCceeEEEecc
Confidence            8765554444321   124444443   27899999865411111   1111000     00111112345577889999


Q ss_pred             CCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEE
Q psy17610        452 SEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVK  509 (515)
Q Consensus       452 ~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~  509 (515)
                      ....+...+.-|.+++||++++.++..-+-.. ..|..-+...+..-++.....|.|.
T Consensus       269 kygviyviTK~G~i~lyDleTgt~i~~nrIs~-~~iF~t~~~~~~~Gi~~Vnr~GqVl  325 (494)
T 1bpo_A          269 KHDVVFLITKYGYIHLYDLETGTCIYMNRISG-ETIFVTAPHEATAGIIGVNRKGQVL  325 (494)
T ss_dssp             TTTEEEEEETTSEEEEEETTTCCEEEEEECCS-SCEEEEEEETTTTEEEEEETTCEEE
T ss_pred             cCCEEEEEecCceEEEEecccceeeeeecccC-CceEEecccCCCCcEEEEccCceEE
Confidence            99999999999999999999999987766544 6666666655555566666677554

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=98.31  E-value=0.00054  Score=61.73  Aligned_cols=225  Identities=14%  Similarity=0.123  Sum_probs=123.1

Q ss_pred             EEEEEEEeeCCCEEEEEeCCCeEEEEecCCCce--EEEec--CCCCCCeEEEEEcCC---CCEEEEecC-C-----CcEE
Q psy17610        168 ICACIVFTYDGKAILSGWNDGFIRCFTPQSGKL--KFIIP--NAHNRGVTALAITQD---GTRLLSGGG-E-----GQVR  234 (515)
Q Consensus       168 ~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~--~~~~~--~~~~~~v~~~~~~~~---~~~l~~~~~-d-----~~i~  234 (515)
                      ....++|.|+|+ ++++...|.|.+++  .++.  +..+.  .........++++|+   +..|.++.. .     +.|.
T Consensus        32 ~P~~ia~~pdG~-l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~  108 (352)
T 2ism_A           32 VPWALAFLPDGG-MLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV  108 (352)
T ss_dssp             CEEEEEECTTSC-EEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred             CceEEEEcCCCe-EEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence            346899999998 55556779999998  3432  22221  122456899999998   555554433 2     5677


Q ss_pred             EEEccCCc---e-eeEEeec---cccCceEEEEEecCCCEEEEEeCC-------------CcEEEEEcccc---------
Q psy17610        235 IWKLTRES---Q-SLQCVLK---EHTSSVSVIQIKSDSKEAMSASTD-------------GTCVLWDLIKS---------  285 (515)
Q Consensus       235 iw~~~~~~---~-~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d-------------~~i~iwd~~~~---------  285 (515)
                      .++.....   . .....+.   +.......++|.|+|.+.++.+..             |.|.-++....         
T Consensus       109 r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~  188 (352)
T 2ism_A          109 RLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLG  188 (352)
T ss_dssp             EEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTT
T ss_pred             EEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccC
Confidence            78775321   1 1122232   111223689999999766664321             45555554320         


Q ss_pred             ---eEEEEE-EcCccEEEEEEcC-CCcEEEEEECCCe--------EEEEeCCC----------------CceEEEEecCC
Q psy17610        286 ---TRLIIM-ILPSMIMSAAYHP-SEVQLITCSTNKM--------IDYWETCD----------------GSIIRSLEGSD  336 (515)
Q Consensus       286 ---~~~~~~-~~~~~~~~~~~~~-~~~~l~~~~~~~~--------i~~~d~~~----------------~~~~~~~~~~~  336 (515)
                         .....+ ........++|+| ++..+++-.....        |.+.....                ..+...+ .++
T Consensus       189 ~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~-~~~  267 (352)
T 2ism_A          189 RRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFW-PQG  267 (352)
T ss_dssp             CTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEEC-TTC
T ss_pred             CCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEec-CCC
Confidence               000111 1123467789999 5665554433332        33332111                0112222 111


Q ss_pred             CccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCee------eeeccCCCCCeeEEEECCCCcEEEEEe
Q psy17610        337 VAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVP------CFVGIGHAASITKIKISPDKKVIVSVS  398 (515)
Q Consensus       337 ~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~------~~~~~~~~~~i~~~~~~~~~~~l~~~~  398 (515)
                       .....++| .+|.++++....+.|...+++....      ...+......+..+++.|||.++++..
T Consensus       268 -~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~  333 (352)
T 2ism_A          268 -FPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTS  333 (352)
T ss_dssp             -CCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred             -CCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEe
Confidence             34567777 4677777776777888887764321      122212235789999999998776654

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=98.31  E-value=0.00029  Score=61.20  Aligned_cols=157  Identities=8%  Similarity=0.077  Sum_probs=106.9

Q ss_pred             EEEEEEeeCCCEEEEEe-CCCeEEEEecCCCceEEEecCCC-------CCCeEEEEE---cCCCCEEEEec---------
Q psy17610        169 CACIVFTYDGKAILSGW-NDGFIRCFTPQSGKLKFIIPNAH-------NRGVTALAI---TQDGTRLLSGG---------  228 (515)
Q Consensus       169 v~~~~~~~~~~~l~~~~-~dg~i~~~~~~~~~~~~~~~~~~-------~~~v~~~~~---~~~~~~l~~~~---------  228 (515)
                      ..++.|.+....+..++ ..+.|..|+...+...... ...       ...+..+.|   .|+++++++..         
T Consensus        15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~-~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g   93 (334)
T 2p9w_A           15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVV-IDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFAD   93 (334)
T ss_dssp             CSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEEC-CTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTS
T ss_pred             CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEe-cCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccc
Confidence            35678988666666666 6899999999866544332 222       113679999   68877766533         


Q ss_pred             ----CCCcEEEEEcc---CCceeeEEeecccc-----------CceEEEEEecCCCEEEEEeCC-CcEEEEEcccceEEE
Q psy17610        229 ----GEGQVRIWKLT---RESQSLQCVLKEHT-----------SSVSVIQIKSDSKEAMSASTD-GTCVLWDLIKSTRLI  289 (515)
Q Consensus       229 ----~d~~i~iw~~~---~~~~~~~~~~~~~~-----------~~v~~~~~~~~~~~l~~~~~d-~~i~iwd~~~~~~~~  289 (515)
                          .+..+..||+.   +........+....           .....++..++|+..++.+.. +.|...+........
T Consensus        94 ~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~  173 (334)
T 2p9w_A           94 QSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVST  173 (334)
T ss_dssp             CCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEE
T ss_pred             cccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEee
Confidence                25779999986   44433333333221           247899999999999988888 887777765432222


Q ss_pred             EEEcCc------cEEEEEEcCCCcEEEEEECCCeEEEEeCCCC
Q psy17610        290 IMILPS------MIMSAAYHPSEVQLITCSTNKMIDYWETCDG  326 (515)
Q Consensus       290 ~~~~~~------~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~  326 (515)
                      ......      ....++++|++..|++....+.+..+|+...
T Consensus       174 ~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p  216 (334)
T 2p9w_A          174 FAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP  216 (334)
T ss_dssp             EEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred             eeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence            221111      2568999999999999888999999998854

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=98.30  E-value=0.0018  Score=64.73  Aligned_cols=233  Identities=12%  Similarity=-0.016  Sum_probs=141.4

Q ss_pred             EEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec-CCcEEEEeCCCC----ceeEEEEecCeEE
Q psy17610         95 KVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS-KNDIRIWSVRTL----NELLRISVMNMIC  169 (515)
Q Consensus        95 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~----~~~~~~~~~~~~v  169 (515)
                      +|+.+. ...|+..++... ....+.. ....+..|+|.+....|+.+.. .+.|+.+++...    .....+.......
T Consensus       397 ~Ll~an-~~~Ir~i~l~~~-~~~~l~~-~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P  473 (791)
T 3m0c_C          397 YLFFTN-RHEVRKMTLDRS-EYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP  473 (791)
T ss_dssp             EEEEEC-BSSEEEECTTSC-CCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCC
T ss_pred             cccccc-ccceeEeeccCC-cceeeec-CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCc
Confidence            444443 446888888764 3333333 4456789999986666666655 677888888753    2222222223345


Q ss_pred             EEEEEeeCCCEEEEE-eCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecC--CCcEEEEEccCCceeeE
Q psy17610        170 ACIVFTYDGKAILSG-WNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGG--EGQVRIWKLTRESQSLQ  246 (515)
Q Consensus       170 ~~~~~~~~~~~l~~~-~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~iw~~~~~~~~~~  246 (515)
                      ..|++.+.+..|+.+ ...+.|.+.++........+ .........|++.|.+..|+....  .+.|...+++....  .
T Consensus       474 ~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~-~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~--~  550 (791)
T 3m0c_C          474 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLF-RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI--Y  550 (791)
T ss_dssp             CEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEE-ECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE--E
T ss_pred             ceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEE-eCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCce--E
Confidence            678898877655544 45688999998865544333 334456889999997666655442  26788888753222  2


Q ss_pred             EeeccccCceEEEEEecCCCEEEEEeC-CCcEEEEEcccceEEEEEEcC---ccEEEEEEcCCCcEEEEEECCCeEEEEe
Q psy17610        247 CVLKEHTSSVSVIQIKSDSKEAMSAST-DGTCVLWDLIKSTRLIIMILP---SMIMSAAYHPSEVQLITCSTNKMIDYWE  322 (515)
Q Consensus       247 ~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~i~~~d  322 (515)
                      ......-.....|++++.+..|+.+.. ...|...++............   .....+++..+ ..+++-...+.|...+
T Consensus       551 ~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~-~lYwtD~~~~~I~~~d  629 (791)
T 3m0c_C          551 SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSAN  629 (791)
T ss_dssp             EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETT-EEEEEETTTTEEEEEE
T ss_pred             EEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCC-EEEEEECCCCEEEEEe
Confidence            222333356789999987777766654 567888888655444444332   23455665332 3333444567788888


Q ss_pred             CCCCceEEEEec
Q psy17610        323 TCDGSIIRSLEG  334 (515)
Q Consensus       323 ~~~~~~~~~~~~  334 (515)
                      ..+++.+..+..
T Consensus       630 k~tG~~~~~l~~  641 (791)
T 3m0c_C          630 RLTGSDVNLLAE  641 (791)
T ss_dssp             TTTCCCCEEEEC
T ss_pred             CCCCcceEEeec
Confidence            777766665543

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=98.27  E-value=0.0015  Score=58.90  Aligned_cols=225  Identities=14%  Similarity=0.038  Sum_probs=122.6

Q ss_pred             CCcEEEEEEecCCCEEEEEecCceEEEEECCCCcee-EE---eeccCccCeEEEEeCCC---CcEEEEEec-C-----Cc
Q psy17610         81 DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTL-TL---VNTCHTSAIYDLQFPVN---FSSVFATCS-K-----ND  147 (515)
Q Consensus        81 ~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~-~~---~~~~h~~~v~~~~~~~~---~~~l~~~~~-d-----~~  147 (515)
                      -.....++|.|+|++ +++..+|.|++++  ++... ..   ...........++|+|+   +..|+++.. .     +.
T Consensus        30 l~~P~~ia~~pdG~l-~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~  106 (352)
T 2ism_A           30 LEVPWALAFLPDGGM-LIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ  106 (352)
T ss_dssp             CSCEEEEEECTTSCE-EEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred             CCCceEEEEcCCCeE-EEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence            346789999999984 4556679999998  33321 11   11112456789999998   556666554 2     56


Q ss_pred             EEEEeCCCCce-----eEE-EEe---cCeEEEEEEEeeCCCEEEEEeC-------------CCeEEEEecCCC-------
Q psy17610        148 IRIWSVRTLNE-----LLR-ISV---MNMICACIVFTYDGKAILSGWN-------------DGFIRCFTPQSG-------  198 (515)
Q Consensus       148 i~iw~~~~~~~-----~~~-~~~---~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~~~~~~~~-------  198 (515)
                      |..++...+..     +.. +..   .......++|.|||.+.++.+.             .|.|.-++.+..       
T Consensus       107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf  186 (352)
T 2ism_A          107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPF  186 (352)
T ss_dssp             EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTT
T ss_pred             EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcc
Confidence            88888764321     111 210   0112357899999975555332             256666665531       


Q ss_pred             -------ceEEEecCCCCCCeEEEEEcC-CCCEEEEecCCCcE------EEEEccCCc----------------eeeEEe
Q psy17610        199 -------KLKFIIPNAHNRGVTALAITQ-DGTRLLSGGGEGQV------RIWKLTRES----------------QSLQCV  248 (515)
Q Consensus       199 -------~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i------~iw~~~~~~----------------~~~~~~  248 (515)
                             ..+..  .++. ....++|+| ++.++++-.....+      .+.-+....                ..+...
T Consensus       187 ~~~~~~~~~i~a--~G~r-np~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~  263 (352)
T 2ism_A          187 LGRRGARPEVYS--LGHR-NPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYF  263 (352)
T ss_dssp             TTCTTSCTTEEE--ECCS-EECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEE
T ss_pred             cCCCCCCccEEE--EcCC-CcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEe
Confidence                   11111  2332 256789999 66655543222221      122222111                011222


Q ss_pred             eccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccce-------EEEEEEcCccEEEEEEcCCCcEEEEEE
Q psy17610        249 LKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKST-------RLIIMILPSMIMSAAYHPSEVQLITCS  313 (515)
Q Consensus       249 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~~~  313 (515)
                      +.. ......++| .++..+++.-..+.|...++....       ....+.....+..+++.|+|.++++..
T Consensus       264 ~~~-~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~  333 (352)
T 2ism_A          264 WPQ-GFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTS  333 (352)
T ss_dssp             CTT-CCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred             cCC-CCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEe
Confidence            222 234566777 466666665566677777765432       112222335688899999987666654

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=98.24  E-value=0.0025  Score=57.35  Aligned_cols=227  Identities=14%  Similarity=0.066  Sum_probs=126.1

Q ss_pred             EEEEEEEeeCCCEEEEEeCCCeEEEEecCCCc-eEEEec--CCCCCCeEEEEEcCC---CCEEEEecC----C----CcE
Q psy17610        168 ICACIVFTYDGKAILSGWNDGFIRCFTPQSGK-LKFIIP--NAHNRGVTALAITQD---GTRLLSGGG----E----GQV  233 (515)
Q Consensus       168 ~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~-~~~~~~--~~~~~~v~~~~~~~~---~~~l~~~~~----d----~~i  233 (515)
                      ....++|.|+|+ |+++..+|.|++++ .+++ .+..+.  .........++++|+   +..|.++..    +    ..|
T Consensus        30 ~P~~ia~~pdG~-l~V~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v  107 (354)
T 3a9g_A           30 VPWSIAPLGGGR-YLVTERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRV  107 (354)
T ss_dssp             CEEEEEEEETTE-EEEEETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEE
T ss_pred             CCeEEEEcCCCe-EEEEeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEE
Confidence            457899999997 55566779999997 3454 222221  122356889999997   455554432    2    567


Q ss_pred             EEEEccCCc-----ee-eEEeecc-ccCceEEEEEecCCCEEEEEeCC-------------CcEEEEEcccc--------
Q psy17610        234 RIWKLTRES-----QS-LQCVLKE-HTSSVSVIQIKSDSKEAMSASTD-------------GTCVLWDLIKS--------  285 (515)
Q Consensus       234 ~iw~~~~~~-----~~-~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d-------------~~i~iwd~~~~--------  285 (515)
                      ..|+.....     .+ ....+.. .......+.|.|||.++++.+..             |.|.-++....        
T Consensus       108 ~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~  187 (354)
T 3a9g_A          108 IRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFP  187 (354)
T ss_dssp             EEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSST
T ss_pred             EEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCC
Confidence            777765331     11 1111221 11124679999999876664431             34555544321        


Q ss_pred             -eEEEEEEcCccEEEEEEcC-CCcEEEEEECCC---eEEEEeCCC--------C--------ceEEEEecCCCccEEEEE
Q psy17610        286 -TRLIIMILPSMIMSAAYHP-SEVQLITCSTNK---MIDYWETCD--------G--------SIIRSLEGSDVAAVNCVD  344 (515)
Q Consensus       286 -~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~---~i~~~d~~~--------~--------~~~~~~~~~~~~~i~~~~  344 (515)
                       ..+.. ........++|+| ++..+++-....   .|.+.....        +        .++..+...+ .....++
T Consensus       188 ~~~i~a-~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~-~ap~G~~  265 (354)
T 3a9g_A          188 NSPIWS-YGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSET-WAPSGAS  265 (354)
T ss_dssp             TCCEEE-ECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCC-CCEEEEE
T ss_pred             CCcEEE-EccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCC-cCCcceE
Confidence             01111 1223456799999 555544432221   243332111        0        1222221122 4567788


Q ss_pred             Ec-------CCCCEEEEEcCCCeEEEEEccCC-eee--ee-ccCCCCCeeEEEECCCCcEEEEEe
Q psy17610        345 FV-------DDGKYFLTGGADQIVKMWMYREG-VPC--FV-GIGHAASITKIKISPDKKVIVSVS  398 (515)
Q Consensus       345 ~~-------~~~~~l~~~~~dg~i~i~d~~~~-~~~--~~-~~~~~~~i~~~~~~~~~~~l~~~~  398 (515)
                      |.       .+|+++++....+.|...++... +..  .. +.+....+..+++.|||.+.++..
T Consensus       266 ~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~  330 (354)
T 3a9g_A          266 FVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS  330 (354)
T ss_dssp             ECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred             EECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence            83       56777777777788988888753 221  22 223345789999999998766654

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=98.22  E-value=0.0022  Score=55.81  Aligned_cols=156  Identities=7%  Similarity=0.077  Sum_probs=109.9

Q ss_pred             EEEEEEecCCCEEEEEe-cCceEEEEECCCCceeEEeecc----Cc--cCeEEEEe---CCCCcEEEEEe----------
Q psy17610         84 ISSLQYNPVNNKVFVGT-VNCEIFLIDMNSGFTLTLVNTC----HT--SAIYDLQF---PVNFSSVFATC----------  143 (515)
Q Consensus        84 v~~~~~s~~~~~l~~~~-~d~~i~iw~~~~~~~~~~~~~~----h~--~~v~~~~~---~~~~~~l~~~~----------  143 (515)
                      --+.+|++....+..++ ..++|..|+...+........+    ..  ..+..|.|   .|+++.+++..          
T Consensus        15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~   94 (334)
T 2p9w_A           15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQ   94 (334)
T ss_dssp             CSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSC
T ss_pred             CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccc
Confidence            34779998666676666 7899999999864333333322    11  13578999   68876655443          


Q ss_pred             ---cCCcEEEEeCC---CCceeEEEEe-------------cCeEEEEEEEeeCCCEEEEEeCC-CeEEEEecCCCceEEE
Q psy17610        144 ---SKNDIRIWSVR---TLNELLRISV-------------MNMICACIVFTYDGKAILSGWND-GFIRCFTPQSGKLKFI  203 (515)
Q Consensus       144 ---~d~~i~iw~~~---~~~~~~~~~~-------------~~~~v~~~~~~~~~~~l~~~~~d-g~i~~~~~~~~~~~~~  203 (515)
                         .+..+..+|+.   +++.+....-             .......++..++|+..++++.. +.|...+.........
T Consensus        95 ~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~  174 (334)
T 2p9w_A           95 SSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTF  174 (334)
T ss_dssp             CSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEE
T ss_pred             ccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeee
Confidence               15779999999   8888776652             11357899999999999988888 8888888765533221


Q ss_pred             ecC----CCCCCeEEEEEcCCCCEEEEecCCCcEEEEEcc
Q psy17610        204 IPN----AHNRGVTALAITQDGTRLLSGGGEGQVRIWKLT  239 (515)
Q Consensus       204 ~~~----~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~  239 (515)
                      ...    ......+.|+++|+|+.|++....|.+..+|+.
T Consensus       175 ~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~  214 (334)
T 2p9w_A          175 AWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVS  214 (334)
T ss_dssp             EECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred             eecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence            111    112346799999999998888779999999986

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=98.22  E-value=0.0027  Score=56.90  Aligned_cols=255  Identities=9%  Similarity=0.087  Sum_probs=162.1

Q ss_pred             CceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEE
Q psy17610        102 NCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAI  181 (515)
Q Consensus       102 d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  181 (515)
                      +..|.|.|+.++..+.+....    -.+.-.+|..+.++.= ...++.|+|+++.+.++...-.+ .|..=.|-.+. .|
T Consensus        47 ~~~vvIiDl~~~~~~~rrpi~----AdsAIMnP~~~iiALr-ag~~lQiFnle~K~klks~~~~e-~VvfWkWis~~-~l  119 (494)
T 1bpo_A           47 QAQVVIIDMNDPSNPIRRPIS----ADSAIMNPASKVIALK-AGKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLN-TV  119 (494)
T ss_dssp             CCEEEEEETTSTTSCEEEECC----CSEEEECSSSSCEEEE-ETTEEEEEETTTTEEEEEEECSS-CCCEEEEEETT-EE
T ss_pred             CCeEEEEECCCCCcceecccc----cceeeeCCCCcEEEEe-cCCeEEEEchHHhhhhcceecCC-CceEEEecCCC-eE
Confidence            347999999987665433221    2234467776544444 47899999999998888887554 44444555443 45


Q ss_pred             EEEeCCCeEEEEecCCC-ceEEEecCCC----CCCeEEEEEcCCCCEEEEec-------CCCcEEEEEccCCceeeEEee
Q psy17610        182 LSGWNDGFIRCFTPQSG-KLKFIIPNAH----NRGVTALAITQDGTRLLSGG-------GEGQVRIWKLTRESQSLQCVL  249 (515)
Q Consensus       182 ~~~~~dg~i~~~~~~~~-~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~-------~d~~i~iw~~~~~~~~~~~~~  249 (515)
                      +..+ +..|.-|+++.. .+...+ ..|    ...|..-..+++.++++..+       -.|.+.+|..+.   ...+.+
T Consensus       120 ~lVT-~taVyHWsi~~~s~P~kvF-dR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er---~~sQ~i  194 (494)
T 1bpo_A          120 ALVT-DNAVYHWSMEGESQPVKMF-DRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR---KVSQPI  194 (494)
T ss_dssp             EEEC-SSEEEEEESSSSCCCEEEE-ECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT---CCEEEE
T ss_pred             EEEc-CCeeEEecccCCCCchhhe-ecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc---cccchh
Confidence            5554 457999999754 344444 222    34577777788888877443       247889999753   345566


Q ss_pred             ccccCceEEEEEecCC---CEEEEEeCC---CcEEEEEcccc--------eEEEEEEcC-----ccEEEEEEcCCCcEEE
Q psy17610        250 KEHTSSVSVIQIKSDS---KEAMSASTD---GTCVLWDLIKS--------TRLIIMILP-----SMIMSAAYHPSEVQLI  310 (515)
Q Consensus       250 ~~~~~~v~~~~~~~~~---~~l~~~~~d---~~i~iwd~~~~--------~~~~~~~~~-----~~~~~~~~~~~~~~l~  310 (515)
                      .+|......+....+.   ..+..+...   +.+.+.++...        +....+..+     .-..++..++.-..++
T Consensus       195 eGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviy  274 (494)
T 1bpo_A          195 EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVF  274 (494)
T ss_dssp             CCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEE
T ss_pred             eeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEE
Confidence            7887655444432111   234444432   68888888532        112222222     2367788889888999


Q ss_pred             EEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCC
Q psy17610        311 TCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREG  369 (515)
Q Consensus       311 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~  369 (515)
                      ..+.-|.+++||+.++.++..-+-.. ..|...+......=++.....|.|.-..++..
T Consensus       275 viTK~G~i~lyDleTgt~i~~nrIs~-~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~  332 (494)
T 1bpo_A          275 LITKYGYIHLYDLETGTCIYMNRISG-ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEE  332 (494)
T ss_dssp             EEETTSEEEEEETTTCCEEEEEECCS-SCEEEEEEETTTTEEEEEETTCEEEEEEECTT
T ss_pred             EEecCceEEEEecccceeeeeecccC-CceEEecccCCCCcEEEEccCceEEEEEEccc
Confidence            99999999999999999998877665 55555555444444555557777766666544

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=98.12  E-value=2e-05  Score=78.00  Aligned_cols=211  Identities=7%  Similarity=-0.029  Sum_probs=122.1

Q ss_pred             CCCcEEEEEEecCCCEEEEEe-cCceEEEEECCC---CceeEEeeccCccCeEEEEeCCCCcEEEEEe-cCCcEEEEeCC
Q psy17610         80 DDSGISSLQYNPVNNKVFVGT-VNCEIFLIDMNS---GFTLTLVNTCHTSAIYDLQFPVNFSSVFATC-SKNDIRIWSVR  154 (515)
Q Consensus        80 ~~~~v~~~~~s~~~~~l~~~~-~d~~i~iw~~~~---~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-~d~~i~iw~~~  154 (515)
                      ....+..|+|++.+..|+.+. ..+.|+.+++.+   +.....+..........|++.+.+..|+.+. ..+.|.+.++.
T Consensus       404 ~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~d  483 (699)
T 1n7d_A          404 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK  483 (699)
T ss_dssp             CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSS
T ss_pred             cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecC
Confidence            345667899999777776654 457899999875   1122222221223356788886555665554 47889999987


Q ss_pred             CCceeEEEEecCeEEEEEEEeeCCCEEEEEeC--CCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEE-EEecCCC
Q psy17610        155 TLNELLRISVMNMICACIVFTYDGKAILSGWN--DGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRL-LSGGGEG  231 (515)
Q Consensus       155 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~  231 (515)
                      .......+.........+++.|.+.+|+.+..  .+.|..+++......... ...-...+.|+|+|++..| ++-+..+
T Consensus       484 g~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~-~~~l~~PnGlavd~~~~~LY~aD~~~~  562 (699)
T 1n7d_A          484 GVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV-TENIQWPNGITLDLLSGRLYWVDSKLH  562 (699)
T ss_dssp             SCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEES-CSSCSSCCCEEECTTTCCEEEEETTTT
T ss_pred             CCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEE-eCCCCCccEEEEeccCCEEEEEecCCC
Confidence            54433322222234567889887665555442  267888877643322222 2223446789999865544 4555667


Q ss_pred             cEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEE
Q psy17610        232 QVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMI  292 (515)
Q Consensus       232 ~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~  292 (515)
                      .|..++++......+............+++..+ .++++....+.|..++..+++.+..+.
T Consensus       563 ~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~~i~  622 (699)
T 1n7d_A          563 SISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLLA  622 (699)
T ss_dssp             EEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEECCC
T ss_pred             eEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceEEee
Confidence            899999864322222111111222345555443 444455556789999887777666554

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=98.03  E-value=0.007  Score=54.44  Aligned_cols=240  Identities=12%  Similarity=0.081  Sum_probs=125.8

Q ss_pred             CceEEEEEecCCCEEEEEeCCCcEEEEEcccce-EEEEEE----cCccEEEEEEcCC---CcEEEEEEC----C----Ce
Q psy17610        254 SSVSVIQIKSDSKEAMSASTDGTCVLWDLIKST-RLIIMI----LPSMIMSAAYHPS---EVQLITCST----N----KM  317 (515)
Q Consensus       254 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-~~~~~~----~~~~~~~~~~~~~---~~~l~~~~~----~----~~  317 (515)
                      .....++|.|+++ ++.+..+|.|.+++. .++ .+..+.    .......++++|+   +..|+++..    +    ..
T Consensus        29 ~~P~~ia~~pdG~-l~V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~  106 (354)
T 3a9g_A           29 EVPWSIAPLGGGR-YLVTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR  106 (354)
T ss_dssp             SCEEEEEEEETTE-EEEEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred             CCCeEEEEcCCCe-EEEEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence            4567899999987 555566799999973 444 111111    1245889999998   555555443    2    56


Q ss_pred             EEEEeCCCC-------ceE-EEEecCCCccEEEEEEcCCCCEEEEEcC-------------CCeEEEEEccCC-------
Q psy17610        318 IDYWETCDG-------SII-RSLEGSDVAAVNCVDFVDDGKYFLTGGA-------------DQIVKMWMYREG-------  369 (515)
Q Consensus       318 i~~~d~~~~-------~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~-------------dg~i~i~d~~~~-------  369 (515)
                      |..++....       +.+ ..+..........++|.|||.++++.+.             .|.|.-++....       
T Consensus       107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf  186 (354)
T 3a9g_A          107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPF  186 (354)
T ss_dssp             EEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSS
T ss_pred             EEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCC
Confidence            777876554       111 1233221123467999999987776442             245555554321       


Q ss_pred             --eeeeeccCCCCCeeEEEECC-CCcEEEEEeCCC---cEEEEeCCCCcCccCCCcccceeeecccccccceeee-cCcc
Q psy17610        370 --VPCFVGIGHAASITKIKISP-DKKVIVSVSADG---GIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIM-ILPS  442 (515)
Q Consensus       370 --~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg---~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  442 (515)
                        ..+. ..++. ....++|+| +++++++-....   .|.+.  .......-.......  .. .......... ....
T Consensus       187 ~~~~i~-a~G~r-np~Gla~d~~~g~l~v~d~g~~~~dei~~i--~~G~nyGwp~~~g~~--~~-~~~~~p~~~~~~~~~  259 (354)
T 3a9g_A          187 PNSPIW-SYGHR-NPQGIDWHRASGVMVATEHGPVGHDEVNII--LKGGNYGWPLATGKA--GR-GEFVDPVIDTGSETW  259 (354)
T ss_dssp             TTCCEE-EECCS-CCCEEEECTTTCCEEEEECCSSSCCEEEEE--CTTCBCCTTTCCSCC--CC-TTSCCCSEECTTCCC
T ss_pred             CCCcEE-EEccC-CcceEEEeCCCCCEEEEecCCCCCcEEEEe--cCCCcCCCCcccCCC--CC-CCCcCCEeecCCCCc
Confidence              0111 12333 346799999 566544432221   23332  211100000000000  00 0000000000 1123


Q ss_pred             cEEEeee-------ccCCcEEEEeecCCeEEEEecCCC-eee--eee-cccccceEEEEEEcCCCcEEEEee
Q psy17610        443 MIMSAAY-------HPSEVQLITCSTNKMIDYWETCDG-SII--RSL-EGSDVAAVNCVDFVDDGKYFLTGG  503 (515)
Q Consensus       443 ~i~~~~~-------s~~~~~l~~~~~dg~v~iwd~~~~-~~~--~~~-~~~~~~~v~~~~~s~~~~~l~s~~  503 (515)
                      ....++|       ..+|.++++.-..+.|...++... +..  ..+ .+. ...+..+++.|||.+.++..
T Consensus       260 ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~-~~rp~~v~~~pDG~lyv~~~  330 (354)
T 3a9g_A          260 APSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNV-FGRLRDVVIDDDGGILISTS  330 (354)
T ss_dssp             CEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTT-SCCEEEEEECTTSCEEEEEC
T ss_pred             CCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCC-CCCeeEEEECCCCcEEEEEe
Confidence            4666777       356777776666778888888753 322  222 222 26789999999998766654

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=97.98  E-value=0.0086  Score=53.87  Aligned_cols=236  Identities=14%  Similarity=0.076  Sum_probs=125.7

Q ss_pred             EEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEE---e---cCCCCCCeEEEEEcCC---CCEEEEec-C-------C
Q psy17610        168 ICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFI---I---PNAHNRGVTALAITQD---GTRLLSGG-G-------E  230 (515)
Q Consensus       168 ~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~---~---~~~~~~~v~~~~~~~~---~~~l~~~~-~-------d  230 (515)
                      ....++|.|+|+.|+++...|.|++++.. +.....   +   ..........++++|+   +..|.... .       .
T Consensus        19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~   97 (353)
T 2g8s_A           19 HPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG   97 (353)
T ss_dssp             SEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred             CcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence            34789999999845556678999999853 332111   1   0122346789999995   44454442 2       2


Q ss_pred             CcEEEEEccCCc-----eee-EEeecc---ccCceEEEEEecCCCEEEEEeCC-------------CcEEEEEcccce--
Q psy17610        231 GQVRIWKLTRES-----QSL-QCVLKE---HTSSVSVIQIKSDSKEAMSASTD-------------GTCVLWDLIKST--  286 (515)
Q Consensus       231 ~~i~iw~~~~~~-----~~~-~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d-------------~~i~iwd~~~~~--  286 (515)
                      ..|..|++....     .+. ...+..   .......+.|.|||.+.++.+..             |.|.-++....-  
T Consensus        98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~  177 (353)
T 2g8s_A           98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPD  177 (353)
T ss_dssp             EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCT
T ss_pred             eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCC
Confidence            356666664321     111 111111   11123579999999666655432             356666654220  


Q ss_pred             ----------EEEEE-EcCccEEEEEEcC-CCcEEEEEEC-C--CeEEEEeC--------CC------------------
Q psy17610        287 ----------RLIIM-ILPSMIMSAAYHP-SEVQLITCST-N--KMIDYWET--------CD------------------  325 (515)
Q Consensus       287 ----------~~~~~-~~~~~~~~~~~~~-~~~~l~~~~~-~--~~i~~~d~--------~~------------------  325 (515)
                                ....+ ........++|+| ++.++++-.. +  ..|.+...        ..                  
T Consensus       178 ~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~~  257 (353)
T 2g8s_A          178 DNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIV  257 (353)
T ss_dssp             TCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSSC
T ss_pred             CCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCCCC
Confidence                      11111 1223578899999 4554443222 1  12222110        00                  


Q ss_pred             ---CceEEEEecCCCccEEEEEEcC-------CCCEEEEEcCCCeEEEEEccCCeeeee---ccCCCCCeeEEEECCCCc
Q psy17610        326 ---GSIIRSLEGSDVAAVNCVDFVD-------DGKYFLTGGADQIVKMWMYREGVPCFV---GIGHAASITKIKISPDKK  392 (515)
Q Consensus       326 ---~~~~~~~~~~~~~~i~~~~~~~-------~~~~l~~~~~dg~i~i~d~~~~~~~~~---~~~~~~~i~~~~~~~~~~  392 (515)
                         ..++..+.. + ..+..++|..       +|+++++....+.|...++..++....   +......+..+++.|||.
T Consensus       258 ~~~~~P~~~~~~-~-~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~  335 (353)
T 2g8s_A          258 AGTEQPVFYWKD-S-PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGY  335 (353)
T ss_dssp             TTSCCCSEEESS-C-CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSC
T ss_pred             CCccCCeEEeCC-C-cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCc
Confidence               011111211 1 3566777753       577777777788888888876543322   222335789999999998


Q ss_pred             EEEEEe-CCCcEEEEeC
Q psy17610        393 VIVSVS-ADGGIFLWTF  408 (515)
Q Consensus       393 ~l~~~~-~dg~i~iw~~  408 (515)
                      ++++.. .+|  +||.+
T Consensus       336 lyv~td~~~g--~I~ri  350 (353)
T 2g8s_A          336 LYVLTDESSG--ELLKV  350 (353)
T ss_dssp             EEEEECSTTE--EEEEE
T ss_pred             EEEEEeCCCC--EEEEE
Confidence            666543 233  45543

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=97.98  E-value=0.0025  Score=56.70  Aligned_cols=185  Identities=14%  Similarity=0.138  Sum_probs=106.6

Q ss_pred             ceEEEEEecCCCEEEEE------------eCCCcEEEEEccc--ceEEE-EEEc--C----ccEEEEEEcC--CCc-EEE
Q psy17610        255 SVSVIQIKSDSKEAMSA------------STDGTCVLWDLIK--STRLI-IMIL--P----SMIMSAAYHP--SEV-QLI  310 (515)
Q Consensus       255 ~v~~~~~~~~~~~l~~~------------~~d~~i~iwd~~~--~~~~~-~~~~--~----~~~~~~~~~~--~~~-~l~  310 (515)
                      ....+...|+|..++++            ..+|.|.++|..+  .+... .+..  .    -....+.+.+  ++. +|+
T Consensus        51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~  130 (355)
T 3sre_A           51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL  130 (355)
T ss_dssp             CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred             CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence            34556667766444443            2689999999873  22221 1221  1    2567777755  343 344


Q ss_pred             EE-EC--CCeEEEEeCCCC----ceEEEEecCCCccEEEEEEcCCCCEEEEEcC-----------------CCeEEEEEc
Q psy17610        311 TC-ST--NKMIDYWETCDG----SIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA-----------------DQIVKMWMY  366 (515)
Q Consensus       311 ~~-~~--~~~i~~~d~~~~----~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-----------------dg~i~i~d~  366 (515)
                      ++ ..  +..+.+|++...    ..+..+........+.+.+.++|.+.++...                 .|.+.-+|.
T Consensus       131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~  210 (355)
T 3sre_A          131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP  210 (355)
T ss_dssp             EEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT
T ss_pred             EEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC
Confidence            44 33  457777766543    2234455554567899999999998777541                 244555544


Q ss_pred             cCCeeeeeccCCCCCeeEEEECCCCcEEEEEe-CCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEE
Q psy17610        367 REGVPCFVGIGHAASITKIKISPDKKVIVSVS-ADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIM  445 (515)
Q Consensus       367 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  445 (515)
                        ++ +..+...-...+.++|+||++.|..+. ..+.|..|++.....       +...         + .. ..+...-
T Consensus       211 --~~-~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~-------l~~~---------~-~~-~~~g~PD  269 (355)
T 3sre_A          211 --ND-VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWT-------LTPL---------R-VL-SFDTLVD  269 (355)
T ss_dssp             --TC-CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSC-------EEEE---------E-EE-ECSSEEE
T ss_pred             --Ce-EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCc-------EecC---------E-EE-eCCCCCc
Confidence              32 222222334568999999998887765 467899999863210       0000         0 00 1135577


Q ss_pred             Eeeecc-CCcEEEEee
Q psy17610        446 SAAYHP-SEVQLITCS  460 (515)
Q Consensus       446 ~~~~s~-~~~~l~~~~  460 (515)
                      .+++.+ +|++.+++.
T Consensus       270 Gi~vD~e~G~lwva~~  285 (355)
T 3sre_A          270 NISVDPVTGDLWVGCH  285 (355)
T ss_dssp             EEEECTTTCCEEEEEE
T ss_pred             eEEEeCCCCcEEEEec
Confidence            888888 588777554

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=97.96  E-value=2e-05  Score=78.08  Aligned_cols=227  Identities=12%  Similarity=-0.024  Sum_probs=130.4

Q ss_pred             CceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec-CCcEEEEeCCC----CceeEEEEecCeEEEEEEEee
Q psy17610        102 NCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS-KNDIRIWSVRT----LNELLRISVMNMICACIVFTY  176 (515)
Q Consensus       102 d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~----~~~~~~~~~~~~~v~~~~~~~  176 (515)
                      .+.|+..++.+. ....+.. ....+..++|++.+..|+.+.. .+.|..+++..    ......+.........+++.+
T Consensus       385 ~~~I~~id~~~~-~~~~~~~-~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~  462 (699)
T 1n7d_A          385 RHEVRKMTLDRS-EYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW  462 (699)
T ss_dssp             TTC-CEECTTSC-CEECCSC-CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCC
T ss_pred             ccceEEEeCCCC-cceeeec-cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEe
Confidence            457888888774 3333333 2345678999987777777765 67899999875    222111111112335577775


Q ss_pred             CCCEEE-EEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecC--CCcEEEEEccCCceeeEEeecccc
Q psy17610        177 DGKAIL-SGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGG--EGQVRIWKLTRESQSLQCVLKEHT  253 (515)
Q Consensus       177 ~~~~l~-~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~iw~~~~~~~~~~~~~~~~~  253 (515)
                      .+..|+ +-...+.|.++++........+ .........++++|.+.+|+....  .+.|..+++.......  .....-
T Consensus       463 ~~g~LY~tD~~~~~I~v~d~dg~~~~~l~-~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~--l~~~~l  539 (699)
T 1n7d_A          463 IHSNIYWTDSVLGTVSVADTKGVKRKTLF-REQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS--LVTENI  539 (699)
T ss_dssp             SSSBCEECCTTTSCEEEEBSSSCCEEEEC-CCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCE--ESCSSC
T ss_pred             eCCcEEEEeccCCeEEEEecCCCceEEEE-eCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeE--EEeCCC
Confidence            544444 4445678999998765544333 223345678899986555554442  2678777765322211  111223


Q ss_pred             CceEEEEEecCCCEEEEEe-CCCcEEEEEcccceEEEEEEcC---ccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceE
Q psy17610        254 SSVSVIQIKSDSKEAMSAS-TDGTCVLWDLIKSTRLIIMILP---SMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSII  329 (515)
Q Consensus       254 ~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~  329 (515)
                      .....|+++|++..|+.+. ..+.|..+++............   .....+++..+ ..+++....+.|..++..+++.+
T Consensus       540 ~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~  618 (699)
T 1n7d_A          540 QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDV  618 (699)
T ss_dssp             SSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEE
T ss_pred             CCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCce
Confidence            3456899998766655544 5678999998654333322211   22344555443 34444455678888888777766


Q ss_pred             EEEec
Q psy17610        330 RSLEG  334 (515)
Q Consensus       330 ~~~~~  334 (515)
                      ..+..
T Consensus       619 ~~i~~  623 (699)
T 1n7d_A          619 NLLAE  623 (699)
T ss_dssp             ECCCT
T ss_pred             EEeec
Confidence            66543

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=97.92  E-value=0.0016  Score=57.40  Aligned_cols=214  Identities=10%  Similarity=0.073  Sum_probs=112.6

Q ss_pred             CeEEEEecCCCceEEEecCCC-CCCeEEEEEcCCCCEEEEecCC-----CcEEEEEccCCc---eeeEEeeccccCceEE
Q psy17610        188 GFIRCFTPQSGKLKFIIPNAH-NRGVTALAITQDGTRLLSGGGE-----GQVRIWKLTRES---QSLQCVLKEHTSSVSV  258 (515)
Q Consensus       188 g~i~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d-----~~i~iw~~~~~~---~~~~~~~~~~~~~v~~  258 (515)
                      ..+.+||+.+++....-..+. ......+.  .++..++.|+.+     ..+.+||+.+..   ......++........
T Consensus        31 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~  108 (301)
T 2vpj_A           31 DVVEKYDPKTQEWSFLPSITRKRRYVASVS--LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGA  108 (301)
T ss_dssp             CCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEE
T ss_pred             eEEEEEcCCCCeEEeCCCCChhhccccEEE--ECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeE
Confidence            368899988876543221111 11122222  256677777754     468899987665   4444333322222222


Q ss_pred             EEEecCCCEEEEEeCC-----CcEEEEEcccceEEEEEEcCcc--EEEEEEcCCCcEEEEEECC-----CeEEEEeCCCC
Q psy17610        259 IQIKSDSKEAMSASTD-----GTCVLWDLIKSTRLIIMILPSM--IMSAAYHPSEVQLITCSTN-----KMIDYWETCDG  326 (515)
Q Consensus       259 ~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~-----~~i~~~d~~~~  326 (515)
                      +.  .+++.++.|+.+     ..+.+||+.+.+-...-..+.+  -.+++. .+++.++.|+.+     ..+..||+.+.
T Consensus       109 ~~--~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~  185 (301)
T 2vpj_A          109 TT--LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVV-ASGVIYCLGGYDGLNILNSVEKYDPHTG  185 (301)
T ss_dssp             EE--ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE-ETTEEEEECCBCSSCBCCCEEEEETTTT
T ss_pred             EE--ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEE-ECCEEEEECCCCCCcccceEEEEeCCCC
Confidence            22  256667776643     3588899887664444333322  112222 256666776654     45889998876


Q ss_pred             ceEEEEecCCC-ccEEEEEEcCCCCEEEEEcCC-----CeEEEEEccCCeeeee--ccCCCCCeeEEEECCCCcEEEEEe
Q psy17610        327 SIIRSLEGSDV-AAVNCVDFVDDGKYFLTGGAD-----QIVKMWMYREGVPCFV--GIGHAASITKIKISPDKKVIVSVS  398 (515)
Q Consensus       327 ~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~  398 (515)
                      +-...-..+.. .....+.  -++++++.|+.+     ..+.+||+.+.+-...  +.........+.+  ++++++.|+
T Consensus       186 ~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG  261 (301)
T 2vpj_A          186 HWTNVTPMATKRSGAGVAL--LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGRLYAIAG  261 (301)
T ss_dssp             EEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECC
T ss_pred             cEEeCCCCCcccccceEEE--ECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCEEEEEcC
Confidence            54333221111 1112222  256778888764     4689999987643222  2111112222233  667777776


Q ss_pred             CC-----CcEEEEeCCC
Q psy17610        399 AD-----GGIFLWTFPE  410 (515)
Q Consensus       399 ~d-----g~i~iw~~~~  410 (515)
                      .+     ..+.+||+.+
T Consensus       262 ~~~~~~~~~v~~yd~~~  278 (301)
T 2vpj_A          262 YDGNSLLSSIECYDPII  278 (301)
T ss_dssp             BCSSSBEEEEEEEETTT
T ss_pred             cCCCcccccEEEEcCCC
Confidence            55     3467777654

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=97.91  E-value=0.0016  Score=57.38  Aligned_cols=217  Identities=9%  Similarity=0.057  Sum_probs=112.1

Q ss_pred             CcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCC-----CeEEEEecCCCc---eEEEecCCC-CCCeEEEE
Q psy17610        146 NDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWND-----GFIRCFTPQSGK---LKFIIPNAH-NRGVTALA  216 (515)
Q Consensus       146 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~~~~~~~~~---~~~~~~~~~-~~~v~~~~  216 (515)
                      ..+.++|..+.+-...-..........+...++..++.|+.+     ..+.+||+.+++   ....-.... ......+.
T Consensus        31 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~  110 (301)
T 2vpj_A           31 DVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATT  110 (301)
T ss_dssp             CCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEE
T ss_pred             eEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEE
Confidence            357888877654221111111111111222356666777654     468999998876   433321111 11122222


Q ss_pred             EcCCCCEEEEecCC-----CcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCC-----CcEEEEEcccce
Q psy17610        217 ITQDGTRLLSGGGE-----GQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTD-----GTCVLWDLIKST  286 (515)
Q Consensus       217 ~~~~~~~l~~~~~d-----~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~  286 (515)
                      +  +++.++.|+.+     ..+.+||+.+.+......++.....-..+.  .+++.++.|+.+     ..+..||+.+.+
T Consensus       111 ~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~  186 (301)
T 2vpj_A          111 L--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVV--ASGVIYCLGGYDGLNILNSVEKYDPHTGH  186 (301)
T ss_dssp             E--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTTTE
T ss_pred             E--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEE--ECCEEEEECCCCCCcccceEEEEeCCCCc
Confidence            2  56677777643     358889987666555544332222222222  366677777654     458899988775


Q ss_pred             EEEEEEcCcc--EEEEEEcCCCcEEEEEECC-----CeEEEEeCCCCceEEEEecCCC-ccEEEEEEcCCCCEEEEEcCC
Q psy17610        287 RLIIMILPSM--IMSAAYHPSEVQLITCSTN-----KMIDYWETCDGSIIRSLEGSDV-AAVNCVDFVDDGKYFLTGGAD  358 (515)
Q Consensus       287 ~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~-----~~i~~~d~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~d  358 (515)
                      -...-..+.+  -.+++. .+++.++.|+.+     ..+.+||+.+.+-...-..+.. .....+.  -++++++.|+.+
T Consensus       187 W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~  263 (301)
T 2vpj_A          187 WTNVTPMATKRSGAGVAL-LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATV--LRGRLYAIAGYD  263 (301)
T ss_dssp             EEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBC
T ss_pred             EEeCCCCCcccccceEEE-ECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEE--ECCEEEEEcCcC
Confidence            4443222221  112222 256666776653     4688999987754332221111 1112222  267777777755


Q ss_pred             -----CeEEEEEccCC
Q psy17610        359 -----QIVKMWMYREG  369 (515)
Q Consensus       359 -----g~i~i~d~~~~  369 (515)
                           ..+.+||.++.
T Consensus       264 ~~~~~~~v~~yd~~~~  279 (301)
T 2vpj_A          264 GNSLLSSIECYDPIID  279 (301)
T ss_dssp             SSSBEEEEEEEETTTT
T ss_pred             CCcccccEEEEcCCCC
Confidence                 35677777654

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=97.85  E-value=0.015  Score=52.25  Aligned_cols=233  Identities=12%  Similarity=0.042  Sum_probs=124.9

Q ss_pred             CcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEE------eeccCccCeEEEEeCCC---CcEEEEEec--------
Q psy17610         82 SGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTL------VNTCHTSAIYDLQFPVN---FSSVFATCS--------  144 (515)
Q Consensus        82 ~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~------~~~~h~~~v~~~~~~~~---~~~l~~~~~--------  144 (515)
                      .....|+|.|+|++|+++...|.|++++.+. .....      ...........++|+|+   +..|+++..        
T Consensus        18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g-~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~   96 (353)
T 2g8s_A           18 DHPWALAFLPDNHGMLITLRGGELRHWQAGK-GLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA   96 (353)
T ss_dssp             SSEEEEEECSTTCCEEEEETTTEEEEEETTT-EECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred             CCcEEEEEcCCCCEEEEEeCCceEEEEeCCC-ceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence            4578999999998455566789999998643 22110      11112345789999996   455655543        


Q ss_pred             CCcEEEEeCCCCc----eeEE-EEecC------eEEEEEEEeeCCCEEEEEeC-------------CCeEEEEecCCCc-
Q psy17610        145 KNDIRIWSVRTLN----ELLR-ISVMN------MICACIVFTYDGKAILSGWN-------------DGFIRCFTPQSGK-  199 (515)
Q Consensus       145 d~~i~iw~~~~~~----~~~~-~~~~~------~~v~~~~~~~~~~~l~~~~~-------------dg~i~~~~~~~~~-  199 (515)
                      ...|..+++....    .... +....      ..-..++|.|||.+.++.+.             .|.|.-++.+..- 
T Consensus        97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p  176 (353)
T 2g8s_A           97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIP  176 (353)
T ss_dssp             EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCC
T ss_pred             eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCC
Confidence            1346666665331    1111 11111      11356999999965554433             2467777765320 


Q ss_pred             -----------eEEEecCCCCCCeEEEEEcC-CCCEEEEecC--CCcEEEEEccCCc-----------------------
Q psy17610        200 -----------LKFIIPNAHNRGVTALAITQ-DGTRLLSGGG--EGQVRIWKLTRES-----------------------  242 (515)
Q Consensus       200 -----------~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~--d~~i~iw~~~~~~-----------------------  242 (515)
                                 ....+..++. ....++|+| +++ |.++..  ++.=.|.-+....                       
T Consensus       177 ~~npf~~~~~~~~~i~a~G~r-np~gl~~d~~~g~-l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~  254 (353)
T 2g8s_A          177 DDNPFIKESGVRAEIWSYGIR-NPQGMAMNPWSNA-LWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKG  254 (353)
T ss_dssp             TTCTTTTSTTSCTTEEEECCS-EEEEEEEETTTTE-EEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCB
T ss_pred             CCCCCcCCCCCCccEEEEcCc-CccceEEECCCCC-EEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccC
Confidence                       1111112343 367899999 554 443322  1112222221100                       


Q ss_pred             ------eeeEEeeccccCceEEEEEec-------CCCEEEEEeCCCcEEEEEcccceEEEEEE----cCccEEEEEEcCC
Q psy17610        243 ------QSLQCVLKEHTSSVSVIQIKS-------DSKEAMSASTDGTCVLWDLIKSTRLIIMI----LPSMIMSAAYHPS  305 (515)
Q Consensus       243 ------~~~~~~~~~~~~~v~~~~~~~-------~~~~l~~~~~d~~i~iwd~~~~~~~~~~~----~~~~~~~~~~~~~  305 (515)
                            ..+...+. +......+.|..       ++.++++.-..+.|...++..++......    ....+..+++.|+
T Consensus       255 ~~~~~~~~P~~~~~-~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pd  333 (353)
T 2g8s_A          255 EIVAGTEQPVFYWK-DSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPD  333 (353)
T ss_dssp             SSCTTSCCCSEEES-SCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTT
T ss_pred             CCCCCccCCeEEeC-CCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCC
Confidence                  00111122 223566777763       46666666667788888877654433222    1246889999999


Q ss_pred             CcEEEEEE-CCCeE
Q psy17610        306 EVQLITCS-TNKMI  318 (515)
Q Consensus       306 ~~~l~~~~-~~~~i  318 (515)
                      |.++++.. .+|.|
T Consensus       334 G~lyv~td~~~g~I  347 (353)
T 2g8s_A          334 GYLYVLTDESSGEL  347 (353)
T ss_dssp             SCEEEEECSTTEEE
T ss_pred             CcEEEEEeCCCCEE
Confidence            98666543 34443

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=97.82  E-value=0.0045  Score=54.46  Aligned_cols=225  Identities=8%  Similarity=0.065  Sum_probs=115.2

Q ss_pred             CEEEEEeCC----CeEEEEecCCCceEEEecCCC-CCCeEEEEEcCCCCEEEEecCC-----CcEEEEEccCCceeeEEe
Q psy17610        179 KAILSGWND----GFIRCFTPQSGKLKFIIPNAH-NRGVTALAITQDGTRLLSGGGE-----GQVRIWKLTRESQSLQCV  248 (515)
Q Consensus       179 ~~l~~~~~d----g~i~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d-----~~i~iw~~~~~~~~~~~~  248 (515)
                      ..++.|+.+    ..+.+||+.+.+....-..+. ...-..+.+  ++..++.|+.+     ..+.+||..+.+......
T Consensus        17 ~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~   94 (302)
T 2xn4_A           17 LMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVAN   94 (302)
T ss_dssp             EEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECC
T ss_pred             EEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEE--CCEEEEEeCcCCCccccceEEECCCCCceeeCCC
Confidence            344455432    458889988876543311111 111122222  56677777754     358889987665554443


Q ss_pred             eccccCceEEEEEecCCCEEEEEeCCC-----cEEEEEcccceEEEEEEcCcc--EEEEEEcCCCcEEEEEEC-------
Q psy17610        249 LKEHTSSVSVIQIKSDSKEAMSASTDG-----TCVLWDLIKSTRLIIMILPSM--IMSAAYHPSEVQLITCST-------  314 (515)
Q Consensus       249 ~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~-------  314 (515)
                      ++..........  -++..++.|+.++     .+.+||+.+.+-...-..+.+  -.+++. -+++.++.|+.       
T Consensus        95 ~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~  171 (302)
T 2xn4_A           95 MRDRRSTLGAAV--LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGV-VGGLLYAVGGYDVASRQC  171 (302)
T ss_dssp             CSSCCBSCEEEE--ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEETTTTEE
T ss_pred             CCccccceEEEE--ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEE-ECCEEEEEeCCCCCCCcc
Confidence            332222222222  3567777777553     477888877654443222221  112222 25566666543       


Q ss_pred             CCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCC-----CeEEEEEccCCeeee--eccCCCCCeeEEEE
Q psy17610        315 NKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGAD-----QIVKMWMYREGVPCF--VGIGHAASITKIKI  387 (515)
Q Consensus       315 ~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~--~~~~~~~~i~~~~~  387 (515)
                      ...+..||+.+.+-...-..+....-.+++. -++++++.|+.+     ..+.+||..+.+-..  .+......-..+.+
T Consensus       172 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~  250 (302)
T 2xn4_A          172 LSTVECYNATTNEWTYIAEMSTRRSGAGVGV-LNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAV  250 (302)
T ss_dssp             CCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE
T ss_pred             ccEEEEEeCCCCcEEECCCCccccccccEEE-ECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEE
Confidence            2358889988765433222111111112222 257788888764     368899987764222  12111111122222


Q ss_pred             CCCCcEEEEEeCCC-----cEEEEeCCCC
Q psy17610        388 SPDKKVIVSVSADG-----GIFLWTFPEL  411 (515)
Q Consensus       388 ~~~~~~l~~~~~dg-----~i~iw~~~~~  411 (515)
                        ++++++.|+.++     .+.+||+.+.
T Consensus       251 --~~~i~v~GG~~~~~~~~~v~~yd~~~~  277 (302)
T 2xn4_A          251 --NGLLYVVGGDDGSCNLASVEYYNPTTD  277 (302)
T ss_dssp             --TTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred             --CCEEEEECCcCCCcccccEEEEcCCCC
Confidence              667777777553     4788887654

>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A

Probab=97.81  E-value=0.022  Score=52.97  Aligned_cols=227  Identities=10%  Similarity=0.044  Sum_probs=132.1

Q ss_pred             CCCEEEEEeC-CCcEEEEEcccceEEEEEEcCc--cEEEEEEc--CCCcEEEEEECC-------CeE------------E
Q psy17610        264 DSKEAMSAST-DGTCVLWDLIKSTRLIIMILPS--MIMSAAYH--PSEVQLITCSTN-------KMI------------D  319 (515)
Q Consensus       264 ~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~--~~~~~~~~--~~~~~l~~~~~~-------~~i------------~  319 (515)
                      ||++++.-.. +..|...++...++.+.+..+.  .+..+.+-  |+..++++++..       |..            .
T Consensus       141 DGrylfiNdkan~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~  220 (638)
T 3sbq_A          141 DGKYLFINDKANSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYN  220 (638)
T ss_dssp             EEEEEEEEETTTTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEE
T ss_pred             eeEEEEEecCCCcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEE
Confidence            6778877764 5678888999998888887764  68888886  788888877642       221            1


Q ss_pred             EEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCC---------------CeEEEEEcc-----------------
Q psy17610        320 YWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGAD---------------QIVKMWMYR-----------------  367 (515)
Q Consensus       320 ~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---------------g~i~i~d~~-----------------  367 (515)
                      ..|..+.+...++...  +....+...++|++.++.+.+               ..+.++++.                 
T Consensus       221 ~iD~~tm~v~~Qv~v~--gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~  298 (638)
T 3sbq_A          221 AIDAETMEMAFQVIVD--GNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDS  298 (638)
T ss_dssp             EEETTTCSEEEEEEES--SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTC
T ss_pred             EEcCCccEEEEEEEcC--CChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCC
Confidence            1233333333333221  233345556777777765432               135555542                 


Q ss_pred             --------C----CeeeeeccCCCCCeeEEEECCCCcEEEEEeC-CCcEEEEeCCCCcCccCCCc-ccceeeeccccccc
Q psy17610        368 --------E----GVPCFVGIGHAASITKIKISPDKKVIVSVSA-DGGIFLWTFPELEDDVGDSR-SLSSKISRSTARST  433 (515)
Q Consensus       368 --------~----~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~~-~~~~~~~~~~~~~~  433 (515)
                              .    +..+..+..-......+..+|||++++.++. +.++.++|+........... ..         ...
T Consensus       299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~---------~~~  369 (638)
T 3sbq_A          299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADP---------RDV  369 (638)
T ss_dssp             CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCG---------GGG
T ss_pred             CeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCc---------ccc
Confidence                    1    1111111122234456889999999988765 78899999876432111100 00         000


Q ss_pred             ceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCC----------eeeeeecccccceEEEEEE------cCCCc
Q psy17610        434 RLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDG----------SIIRSLEGSDVAAVNCVDF------VDDGK  497 (515)
Q Consensus       434 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~----------~~~~~~~~~~~~~v~~~~~------s~~~~  497 (515)
                      ..............+|.++|.-..+---|..|.-|++...          ..+..+.-|  ..+-.+.-      .|||+
T Consensus       370 ~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~--YqpGH~~~~~get~~~dGk  447 (638)
T 3sbq_A          370 IVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVH--YQPGHLHASLCETNEADGK  447 (638)
T ss_dssp             EEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECS--SCEEEEEETTTTSTTCCSC
T ss_pred             eEeeccCCCcccEEEECCCCceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccc--cCCcccccCCCccCCCCcc
Confidence            0001112234778899999965566668999999998753          345555554  23333333      67888


Q ss_pred             EEEEee
Q psy17610        498 YFLTGG  503 (515)
Q Consensus       498 ~l~s~~  503 (515)
                      +|++..
T Consensus       448 ~lv~ln  453 (638)
T 3sbq_A          448 WLVALS  453 (638)
T ss_dssp             EEEEEE
T ss_pred             EEEEec
Confidence            888754

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=97.76  E-value=0.0044  Score=54.53  Aligned_cols=228  Identities=9%  Similarity=0.065  Sum_probs=112.6

Q ss_pred             CCEEEEEecC----ceEEEEECCCCceeEEee--ccCccCeEEEEeCCCCcEEEEEecC-----CcEEEEeCCCCceeEE
Q psy17610         93 NNKVFVGTVN----CEIFLIDMNSGFTLTLVN--TCHTSAIYDLQFPVNFSSVFATCSK-----NDIRIWSVRTLNELLR  161 (515)
Q Consensus        93 ~~~l~~~~~d----~~i~iw~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~l~~~~~d-----~~i~iw~~~~~~~~~~  161 (515)
                      +.+++.|+.+    ..+..||..+.. -....  ......-..+.+  ++..++.++.+     ..+.+||..+.+-...
T Consensus        16 ~~i~v~GG~~~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~   92 (302)
T 2xn4_A           16 KLMVVVGGQAPKAIRSVECYDFKEER-WHQVAELPSRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSV   92 (302)
T ss_dssp             EEEEEECCBSSSBCCCEEEEETTTTE-EEEECCCSSCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTEEEEE
T ss_pred             CEEEEECCCCCCCCCcEEEEcCcCCc-EeEcccCCcccccceEEEE--CCEEEEEeCcCCCccccceEEECCCCCceeeC
Confidence            3445555532    468889988742 22221  111111112222  45566666543     3588888876542221


Q ss_pred             EEecCeEEEEEEEeeCCCEEEEEeCCC-----eEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCC------
Q psy17610        162 ISVMNMICACIVFTYDGKAILSGWNDG-----FIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGE------  230 (515)
Q Consensus       162 ~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------  230 (515)
                      -..........+..-++..++.|+.++     .+.+||+.+.+....-.......-.+++.. +++.++.|+.+      
T Consensus        93 ~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~  171 (302)
T 2xn4_A           93 ANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV-GGLLYAVGGYDVASRQC  171 (302)
T ss_dssp             CCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEETTTTEE
T ss_pred             CCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE-CCEEEEEeCCCCCCCcc
Confidence            111111111111123666677776543     578899888765443211111111122222 56667776643      


Q ss_pred             -CcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCC-----CcEEEEEcccceEEEEEEcCcc--EEEEEE
Q psy17610        231 -GQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTD-----GTCVLWDLIKSTRLIIMILPSM--IMSAAY  302 (515)
Q Consensus       231 -~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~--~~~~~~  302 (515)
                       ..+.+||+.+........++....... +.. -+++.++.|+.+     ..+.+||+.+.+-......+.+  -..++ 
T Consensus       172 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~-~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~-  248 (302)
T 2xn4_A          172 LSTVECYNATTNEWTYIAEMSTRRSGAG-VGV-LNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVC-  248 (302)
T ss_dssp             CCCEEEEETTTTEEEEECCCSSCCBSCE-EEE-ETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE-
T ss_pred             ccEEEEEeCCCCcEEECCCCcccccccc-EEE-ECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEE-
Confidence             358889987665554433332222222 222 256777777654     3688999887654433222221  11122 


Q ss_pred             cCCCcEEEEEECCC-----eEEEEeCCCCc
Q psy17610        303 HPSEVQLITCSTNK-----MIDYWETCDGS  327 (515)
Q Consensus       303 ~~~~~~l~~~~~~~-----~i~~~d~~~~~  327 (515)
                      ..+++.++.|+.++     .+.+||+.+.+
T Consensus       249 ~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~  278 (302)
T 2xn4_A          249 AVNGLLYVVGGDDGSCNLASVEYYNPTTDK  278 (302)
T ss_dssp             EETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred             EECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence            22566666666543     47777776654

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=97.71  E-value=0.0056  Score=54.21  Aligned_cols=212  Identities=6%  Similarity=-0.022  Sum_probs=106.6

Q ss_pred             EEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecC----C-------CcEEEEEccCCceeeEEee
Q psy17610        181 ILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGG----E-------GQVRIWKLTRESQSLQCVL  249 (515)
Q Consensus       181 l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d-------~~i~iw~~~~~~~~~~~~~  249 (515)
                      ++.|+  ..+..||+.+++....-...............++..++.|+.    +       ..+..||..+........+
T Consensus         8 ~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~   85 (315)
T 4asc_A            8 FMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPL   85 (315)
T ss_dssp             EEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCB
T ss_pred             EEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCC
Confidence            33444  569999999887643221111122333333457777777773    1       1267788765554433322


Q ss_pred             ccccCceEEEEEecCCCEEEEEeCC--------CcEEEEEcccceEEEEEEcCcc--EEEEEEcCCCcEEEEEEC-C---
Q psy17610        250 KEHTSSVSVIQIKSDSKEAMSASTD--------GTCVLWDLIKSTRLIIMILPSM--IMSAAYHPSEVQLITCST-N---  315 (515)
Q Consensus       250 ~~~~~~v~~~~~~~~~~~l~~~~~d--------~~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~-~---  315 (515)
                      +...... +++. -++..++.|+.+        ..+.+||..+.+-...-..+.+  -.+++. .+++.++.|+. +   
T Consensus        86 p~~r~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~  162 (315)
T 4asc_A           86 PSPRCLF-GLGE-ALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS-HMDLVYVIGGKGSDRK  162 (315)
T ss_dssp             SSCEESC-EEEE-ETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCTTSC
T ss_pred             Ccchhce-eEEE-ECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE-ECCEEEEEeCCCCCCc
Confidence            2211111 2222 255666666632        4588999887654332222221  122222 45566666665 2   


Q ss_pred             --CeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCC-----eEEEEEccCCeeee--eccCCCCCeeEEE
Q psy17610        316 --KMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQ-----IVKMWMYREGVPCF--VGIGHAASITKIK  386 (515)
Q Consensus       316 --~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~--~~~~~~~~i~~~~  386 (515)
                        ..+.+||..+.+-...-..+....-.+++. -++++++.|+.++     .+.+||..+.+-..  .+.........+.
T Consensus       163 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~  241 (315)
T 4asc_A          163 CLNKMCVYDPKKFEWKELAPMQTARSLFGATV-HDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVS  241 (315)
T ss_dssp             BCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE
T ss_pred             ccceEEEEeCCCCeEEECCCCCCchhceEEEE-ECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEE
Confidence              468899988764332211111111112222 2677888887654     58889987763222  2211111222233


Q ss_pred             ECCCCcEEEEEeCC
Q psy17610        387 ISPDKKVIVSVSAD  400 (515)
Q Consensus       387 ~~~~~~~l~~~~~d  400 (515)
                      +  ++++++.|+.+
T Consensus       242 ~--~~~l~v~GG~~  253 (315)
T 4asc_A          242 L--VGTLYAIGGFA  253 (315)
T ss_dssp             E--TTEEEEEEEEE
T ss_pred             E--CCEEEEECCcc
Confidence            3  56777777653

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=97.70  E-value=0.024  Score=50.45  Aligned_cols=196  Identities=11%  Similarity=0.123  Sum_probs=112.2

Q ss_pred             CcEEEEEEecCCCEEEEE------------ecCceEEEEECCC--CceeEEeecc-----CccCeEEEEeCC--CCc-EE
Q psy17610         82 SGISSLQYNPVNNKVFVG------------TVNCEIFLIDMNS--GFTLTLVNTC-----HTSAIYDLQFPV--NFS-SV  139 (515)
Q Consensus        82 ~~v~~~~~s~~~~~l~~~------------~~d~~i~iw~~~~--~~~~~~~~~~-----h~~~v~~~~~~~--~~~-~l  139 (515)
                      ...-.++..|+|..++++            ..+|.|.++|.++  ++.......+     ..-....+.+.+  ++. +|
T Consensus        50 ~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L  129 (355)
T 3sre_A           50 NGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYL  129 (355)
T ss_dssp             SCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEE
T ss_pred             CCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEE
Confidence            344566678877544443            1689999999974  2222222222     223566777755  443 45


Q ss_pred             EEEec---CCcEEEEeCCCCcee-E---EEEec-CeEEEEEEEeeCCCEEEEEe-----------------CCCeEEEEe
Q psy17610        140 FATCS---KNDIRIWSVRTLNEL-L---RISVM-NMICACIVFTYDGKAILSGW-----------------NDGFIRCFT  194 (515)
Q Consensus       140 ~~~~~---d~~i~iw~~~~~~~~-~---~~~~~-~~~v~~~~~~~~~~~l~~~~-----------------~dg~i~~~~  194 (515)
                      +++..   +.+|.+|+++..... .   .+.+. -.....+.+.++|.+.++..                 ..|.+..++
T Consensus       130 ~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d  209 (355)
T 3sre_A          130 LVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYS  209 (355)
T ss_dssp             EEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEEC
T ss_pred             EEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEE
Confidence            55533   467888887654222 2   22221 12468899999998766643                 124455555


Q ss_pred             cCCCceEEEecCCCCCCeEEEEEcCCCCEEEEec-CCCcEEEEEccCC-ceeeEEeeccccCceEEEEEec-CCCEEEEE
Q psy17610        195 PQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGG-GEGQVRIWKLTRE-SQSLQCVLKEHTSSVSVIQIKS-DSKEAMSA  271 (515)
Q Consensus       195 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iw~~~~~-~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~  271 (515)
                      .  ++.....  ..-...+.++|+||++.|+.+. ..+.|..|++... .......+ ........+++.+ +|++.+++
T Consensus       210 ~--~~~~~~~--~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~  284 (355)
T 3sre_A          210 P--NDVRVVA--EGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGC  284 (355)
T ss_dssp             T--TCCEEEE--EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEE
T ss_pred             C--CeEEEee--cCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEe
Confidence            4  3332221  2234568999999998777654 5688999998632 22222233 2245567888888 58877766


Q ss_pred             eCC-CcEEEEEc
Q psy17610        272 STD-GTCVLWDL  282 (515)
Q Consensus       272 ~~d-~~i~iwd~  282 (515)
                      ..+ +.|..|+.
T Consensus       285 ~~~g~~v~~~~P  296 (355)
T 3sre_A          285 HPNGMRIFFYDA  296 (355)
T ss_dssp             ESCHHHHHSCCT
T ss_pred             cCCceEEEEECC
Confidence            544 34444444

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=97.69  E-value=0.0057  Score=54.91  Aligned_cols=142  Identities=15%  Similarity=0.098  Sum_probs=91.2

Q ss_pred             CCeEEEEeCCCCceEEEEecC---CCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCe------------eeeeccC--
Q psy17610        315 NKMIDYWETCDGSIIRSLEGS---DVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGV------------PCFVGIG--  377 (515)
Q Consensus       315 ~~~i~~~d~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~------------~~~~~~~--  377 (515)
                      ++.||.-++......+.+..+   ....+..+..+|+|++||..+. ..|.|..+..+.            ..+.+.-  
T Consensus        40 ~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~  118 (452)
T 3pbp_A           40 DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDE  118 (452)
T ss_dssp             TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGG
T ss_pred             CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCC
Confidence            356777676655455555554   2246788999999999999875 478888887321            0111111  


Q ss_pred             ----CCCCeeEEEECC---CCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeec
Q psy17610        378 ----HAASITKIKISP---DKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYH  450 (515)
Q Consensus       378 ----~~~~i~~~~~~~---~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s  450 (515)
                          ...+|..+.|+|   .+..|++-..|+.|++||+........   .+...       ....-.......+.+++|+
T Consensus       119 ~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~---~L~k~-------~~~fg~d~~~~ev~S~~Fg  188 (452)
T 3pbp_A          119 EEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI---VLNKP-------NNSFGLDARVNDITDLEFS  188 (452)
T ss_dssp             CC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE---EESCC-------CSEEESCSSCCCEEEEEEC
T ss_pred             cccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc---chhcc-------ccccCCCcccceEEEEEEc
Confidence                357799999999   456899999999999999987321111   11100       0001111222568899999


Q ss_pred             cCCcEEEEee--cCCeEEE
Q psy17610        451 PSEVQLITCS--TNKMIDY  467 (515)
Q Consensus       451 ~~~~~l~~~~--~dg~v~i  467 (515)
                      +++-.|...+  ..|.|+-
T Consensus       189 ~~~lTLYvl~~t~~GDIYA  207 (452)
T 3pbp_A          189 KDGLTLYCLNTTEGGDIFA  207 (452)
T ss_dssp             TTSSCEEEEECTTSCEEEE
T ss_pred             CCCcEEEEEecCCCCCEEE
Confidence            9887666644  7888764

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=97.69  E-value=0.012  Score=47.46  Aligned_cols=179  Identities=8%  Similarity=-0.047  Sum_probs=95.8

Q ss_pred             CcEEEEEECCCeEEEEeCCCCc------eEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCC
Q psy17610        306 EVQLITCSTNKMIDYWETCDGS------IIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHA  379 (515)
Q Consensus       306 ~~~l~~~~~~~~i~~~d~~~~~------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~  379 (515)
                      +.+|+....| +++.=...++.      ...++-...-..+..++|+|+|.+.++  .+|.++-.+..+.... ...+..
T Consensus         4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~-~W~~s~   79 (236)
T 1tl2_A            4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDND-NWMGRA   79 (236)
T ss_dssp             CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTC-CHHHHC
T ss_pred             ceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCcc-cccccc
Confidence            3445555555 55554444443      233333322246779999999997777  6777666665442111 010111


Q ss_pred             CC--------eeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeecc
Q psy17610        380 AS--------ITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHP  451 (515)
Q Consensus       380 ~~--------i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~  451 (515)
                      ..        -.++.|.|+|.+.++  .||.|.-++-.+....    .-+         .....+-..-=..+..+.+.|
T Consensus        80 t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~----~Wl---------~~a~~vg~~gw~~~~~lff~p  144 (236)
T 1tl2_A           80 KKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTD----NWI---------ARATEVGSGGWSGFKFLFFHP  144 (236)
T ss_dssp             EEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTC----CHH---------HHSEEEECSSGGGEEEEEECT
T ss_pred             cEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCC----cee---------ccccEeccCCCCceEEEEECC
Confidence            22        478999999987777  5688877764332110    000         000000011113478999999


Q ss_pred             CCcEEEEeecCCeEEEEecCCCee------eeeecccccceEEEEEEcCCCcEEEEeecCCe
Q psy17610        452 SEVQLITCSTNKMIDYWETCDGSI------IRSLEGSDVAAVNCVDFVDDGKYFLTGGADQI  507 (515)
Q Consensus       452 ~~~~l~~~~~dg~v~iwd~~~~~~------~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~  507 (515)
                      +|.+.++.  |+.++-....++..      ...+-...-..-.-+.|.|++...+..  +|.
T Consensus       145 ~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g~  202 (236)
T 1tl2_A          145 NGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ--GGK  202 (236)
T ss_dssp             TSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE--TTE
T ss_pred             CceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEEe--CCe
Confidence            99887776  77765443332210      011110111234457799999876665  763

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=97.68  E-value=0.0071  Score=53.26  Aligned_cols=224  Identities=11%  Similarity=0.055  Sum_probs=118.0

Q ss_pred             EEEEEeC--CCeEEEEecCCCceEEEecCCC-CCCeEEEEEcCCCCEEEEecCC----CcEEEEEccCCceeeEEeeccc
Q psy17610        180 AILSGWN--DGFIRCFTPQSGKLKFIIPNAH-NRGVTALAITQDGTRLLSGGGE----GQVRIWKLTRESQSLQCVLKEH  252 (515)
Q Consensus       180 ~l~~~~~--dg~i~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d----~~i~iw~~~~~~~~~~~~~~~~  252 (515)
                      .++.|+.  ...+.+||..+++....-..+. ...-..+.+  ++..++.|+.+    ..+.+||...........++..
T Consensus        14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~   91 (306)
T 3ii7_A           14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFW--DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTP   91 (306)
T ss_dssp             EEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEE--TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSC
T ss_pred             EEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEE--CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcc
Confidence            4445543  3578999998876543321111 111222222  56677777754    5688899876655554443322


Q ss_pred             cCceEEEEEecCCCEEEEEeCC------CcEEEEEcccceEEEEEEcCcc--EEEEEEcCCCcEEEEEEC---------C
Q psy17610        253 TSSVSVIQIKSDSKEAMSASTD------GTCVLWDLIKSTRLIIMILPSM--IMSAAYHPSEVQLITCST---------N  315 (515)
Q Consensus       253 ~~~v~~~~~~~~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~---------~  315 (515)
                      ......+.  -+++.++.|+.+      ..+.+||..+.+-...-..+.+  -.+++. .+++.++.|+.         -
T Consensus        92 r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~  168 (306)
T 3ii7_A           92 RDSLAACA--AEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE-ANGLIYVCGGSLGNNVSGRVL  168 (306)
T ss_dssp             CBSCEEEE--ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEESCTTTCEEC
T ss_pred             ccceeEEE--ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE-ECCEEEEECCCCCCCCccccc
Confidence            22222222  266677777754      4688999887764443222221  112222 25566666543         3


Q ss_pred             CeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCC-----CeEEEEEccCCee--eeeccCCCCCeeEEEEC
Q psy17610        316 KMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGAD-----QIVKMWMYREGVP--CFVGIGHAASITKIKIS  388 (515)
Q Consensus       316 ~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~--~~~~~~~~~~i~~~~~~  388 (515)
                      ..+.+||+.+.+-...-..+....-.++... ++++++.|+.+     ..+.+||..+.+-  +..+.........+.+ 
T Consensus       169 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-  246 (306)
T 3ii7_A          169 NSCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV-  246 (306)
T ss_dssp             CCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE-
T ss_pred             ceEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE-
Confidence            4588999887754332222111111122222 67777877653     3588899877532  2222222222233333 


Q ss_pred             CCCcEEEEEeCC-----CcEEEEeCCCC
Q psy17610        389 PDKKVIVSVSAD-----GGIFLWTFPEL  411 (515)
Q Consensus       389 ~~~~~l~~~~~d-----g~i~iw~~~~~  411 (515)
                       ++++++.|+.+     ..+.+||+.+.
T Consensus       247 -~~~i~v~GG~~~~~~~~~~~~yd~~~~  273 (306)
T 3ii7_A          247 -GSIVYVLAGFQGVGRLGHILEYNTETD  273 (306)
T ss_dssp             -TTEEEEEECBCSSSBCCEEEEEETTTT
T ss_pred             -CCEEEEEeCcCCCeeeeeEEEEcCCCC
Confidence             67777778754     45777777653

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=97.67  E-value=0.00083  Score=59.20  Aligned_cols=202  Identities=11%  Similarity=0.112  Sum_probs=109.3

Q ss_pred             CCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEe--CCCCcEEEEE--ecCCcEEEEeCCCCceeEEEEecC--
Q psy17610         93 NNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQF--PVNFSSVFAT--CSKNDIRIWSVRTLNELLRISVMN--  166 (515)
Q Consensus        93 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~--~~~~~~l~~~--~~d~~i~iw~~~~~~~~~~~~~~~--  166 (515)
                      +..+++++.||.|+-.|.++|+..-........++....-  .+.+..++..  ..||.+..++..+|.....+....  
T Consensus        10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv   89 (339)
T 2be1_A           10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV   89 (339)
T ss_dssp             EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred             CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence            3478899999999999999987766654332123322211  1112244444  579999999998886555444211  


Q ss_pred             --eEEEE---EEE-e----eCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCC------eEEEEEc-----CCCCEEE
Q psy17610        167 --MICAC---IVF-T----YDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRG------VTALAIT-----QDGTRLL  225 (515)
Q Consensus       167 --~~v~~---~~~-~----~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~------v~~~~~~-----~~~~~l~  225 (515)
                        .++..   ... .    ..+..+++++.+|.+...|+.+|+.+..+..+....      ..|....     ..+..++
T Consensus        90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~  169 (339)
T 2be1_A           90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIV  169 (339)
T ss_dssp             TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEE
T ss_pred             eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEE
Confidence              11110   000 0    145578899999999999999999999885432211      1111111     1234566


Q ss_pred             EecCCCcEEEEEccCCceeeEEeeccccCc-eE-----EEEEecCCCEEEEEeCCCcEEEEEcccceEEE-EEEcCccE
Q psy17610        226 SGGGEGQVRIWKLTRESQSLQCVLKEHTSS-VS-----VIQIKSDSKEAMSASTDGTCVLWDLIKSTRLI-IMILPSMI  297 (515)
Q Consensus       226 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~-v~-----~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~-~~~~~~~~  297 (515)
                      .+..+..+.+.+- ++. .....+...... +.     ....+.|+.+ +.++.||.|..+|..++..+. ......++
T Consensus       170 ig~~~y~v~~~~~-sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W~~~~l~sPv  245 (339)
T 2be1_A          170 IGKTIFELGIHSY-DGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARWVSPTFPGII  245 (339)
T ss_dssp             EEEEEEECEECCT-TSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEEECCCCSSCE
T ss_pred             EecceEEEEEECC-CCC-eEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcEEEEeecCCCCe
Confidence            6666655555442 111 111011000000 00     0000123555 557889999999998888766 44444443

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=97.67  E-value=0.012  Score=51.98  Aligned_cols=226  Identities=8%  Similarity=-0.052  Sum_probs=111.1

Q ss_pred             EEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec----C-------CcEEEEeCCCCceeEEEEe
Q psy17610         96 VFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS----K-------NDIRIWSVRTLNELLRISV  164 (515)
Q Consensus        96 l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~----d-------~~i~iw~~~~~~~~~~~~~  164 (515)
                      ++.|+  ..+..||..+++-...................++..++.++.    +       ..+..||..+.+-...-..
T Consensus         8 ~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~   85 (315)
T 4asc_A            8 FMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPL   85 (315)
T ss_dssp             EEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCB
T ss_pred             EEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCC
Confidence            34444  479999998854222222211122222233346667777763    1       1267788876542111011


Q ss_pred             cCeEEEEEEEeeCCCEEEEEeCC--------CeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecC-C-----
Q psy17610        165 MNMICACIVFTYDGKAILSGWND--------GFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGG-E-----  230 (515)
Q Consensus       165 ~~~~v~~~~~~~~~~~l~~~~~d--------g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-----  230 (515)
                      ........+..-++..++.|+.+        ..+.+||+.+++....-..+....-.+++. .+++.++.|+. +     
T Consensus        86 p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~  164 (315)
T 4asc_A           86 PSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS-HMDLVYVIGGKGSDRKCL  164 (315)
T ss_dssp             SSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCTTSCBC
T ss_pred             CcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE-ECCEEEEEeCCCCCCccc
Confidence            11111111112256666666632        458899998876543221111111112222 35667777765 2     


Q ss_pred             CcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCC-----cEEEEEcccceEEEEEEcCcc--EEEEEEc
Q psy17610        231 GQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDG-----TCVLWDLIKSTRLIIMILPSM--IMSAAYH  303 (515)
Q Consensus       231 ~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~~~~~~~~~~~--~~~~~~~  303 (515)
                      ..+.+||+.+........++.....-..+  .-+++.++.|+.++     .+.+||+.+.+-...-..+.+  -.+++. 
T Consensus       165 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-  241 (315)
T 4asc_A          165 NKMCVYDPKKFEWKELAPMQTARSLFGAT--VHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVS-  241 (315)
T ss_dssp             CCEEEEETTTTEEEECCCCSSCCBSCEEE--EETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE-
T ss_pred             ceEEEEeCCCCeEEECCCCCCchhceEEE--EECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEE-
Confidence            46889998766555443333222222222  23667777777654     478888877654443322221  112222 


Q ss_pred             CCCcEEEEEECC--------------CeEEEEeCCCCc
Q psy17610        304 PSEVQLITCSTN--------------KMIDYWETCDGS  327 (515)
Q Consensus       304 ~~~~~l~~~~~~--------------~~i~~~d~~~~~  327 (515)
                      -+++.++.|+.+              ..+.+||+.+.+
T Consensus       242 ~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~  279 (315)
T 4asc_A          242 LVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKK  279 (315)
T ss_dssp             ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTE
T ss_pred             ECCEEEEECCccccCcCCccccccccCcEEEecCCCCh
Confidence            255666666653              235667766654

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=97.61  E-value=0.015  Score=51.15  Aligned_cols=225  Identities=10%  Similarity=0.085  Sum_probs=115.3

Q ss_pred             EEEEEec--CCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCC----CeEEEEecCCCceEEEecCCCC-C
Q psy17610        138 SVFATCS--KNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWND----GFIRCFTPQSGKLKFIIPNAHN-R  210 (515)
Q Consensus       138 ~l~~~~~--d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~~~~~~~~~~~~~~~~~~~-~  210 (515)
                      .++.++.  ...+.+||..+.+-...-..........+..-++..++.|+.+    ..+.+||+.+++....-..+.. .
T Consensus        14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~   93 (306)
T 3ii7_A           14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRD   93 (306)
T ss_dssp             EEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCB
T ss_pred             EEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcccc
Confidence            3444443  3568888887754221110011111111112366666777654    6788999988865443221111 1


Q ss_pred             CeEEEEEcCCCCEEEEecCC------CcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeC---------CC
Q psy17610        211 GVTALAITQDGTRLLSGGGE------GQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST---------DG  275 (515)
Q Consensus       211 ~v~~~~~~~~~~~l~~~~~d------~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------d~  275 (515)
                      ....+.+  +++.++.|+.+      ..+.+||...........++.....-..+ . -+++.++.|+.         -.
T Consensus        94 ~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~-~-~~~~iyv~GG~~~~~~~~~~~~  169 (306)
T 3ii7_A           94 SLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMV-E-ANGLIYVCGGSLGNNVSGRVLN  169 (306)
T ss_dssp             SCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEE-E-ETTEEEEECCEESCTTTCEECC
T ss_pred             ceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEE-E-ECCEEEEECCCCCCCCcccccc
Confidence            1222222  56677777765      46889998766554443333222222222 2 35666666653         34


Q ss_pred             cEEEEEcccceEEEEEEcCcc--EEEEEEcCCCcEEEEEECC-----CeEEEEeCCCCceEEEEecCCC-ccEEEEEEcC
Q psy17610        276 TCVLWDLIKSTRLIIMILPSM--IMSAAYHPSEVQLITCSTN-----KMIDYWETCDGSIIRSLEGSDV-AAVNCVDFVD  347 (515)
Q Consensus       276 ~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~-----~~i~~~d~~~~~~~~~~~~~~~-~~i~~~~~~~  347 (515)
                      .+.+||+.+.+-...-..+.+  -.+++.. +++.++.|+.+     ..+.+||+.+.+-...-..+.. ....++.+  
T Consensus       170 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--  246 (306)
T 3ii7_A          170 SCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--  246 (306)
T ss_dssp             CEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--
T ss_pred             eEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--
Confidence            588999887754433222221  1122222 56666666543     4588899887643322111111 12222233  


Q ss_pred             CCCEEEEEcCC-----CeEEEEEccCC
Q psy17610        348 DGKYFLTGGAD-----QIVKMWMYREG  369 (515)
Q Consensus       348 ~~~~l~~~~~d-----g~i~i~d~~~~  369 (515)
                      ++++++.|+.+     ..+.+||..+.
T Consensus       247 ~~~i~v~GG~~~~~~~~~~~~yd~~~~  273 (306)
T 3ii7_A          247 GSIVYVLAGFQGVGRLGHILEYNTETD  273 (306)
T ss_dssp             TTEEEEEECBCSSSBCCEEEEEETTTT
T ss_pred             CCEEEEEeCcCCCeeeeeEEEEcCCCC
Confidence            67788888754     46778887665

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=97.55  E-value=0.018  Score=51.03  Aligned_cols=178  Identities=12%  Similarity=0.065  Sum_probs=91.6

Q ss_pred             eEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecC----CC-------cEEEEEccCCceeeEEeeccccCceE
Q psy17610        189 FIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGG----EG-------QVRIWKLTRESQSLQCVLKEHTSSVS  257 (515)
Q Consensus       189 ~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~-------~i~iw~~~~~~~~~~~~~~~~~~~v~  257 (515)
                      .+..||..+++....-...............++..++.|+.    ++       .+..||..+........++...... 
T Consensus        25 ~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-  103 (318)
T 2woz_A           25 AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLF-  103 (318)
T ss_dssp             EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSC-
T ss_pred             ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCcccccc-
Confidence            37899998887644221111122223333456778888873    12       1677887655544333332222222 


Q ss_pred             EEEEecCCCEEEEEeCC-------CcEEEEEcccceEEEEEEcCccE--EEEEEcCCCcEEEEEEC------CCeEEEEe
Q psy17610        258 VIQIKSDSKEAMSASTD-------GTCVLWDLIKSTRLIIMILPSMI--MSAAYHPSEVQLITCST------NKMIDYWE  322 (515)
Q Consensus       258 ~~~~~~~~~~l~~~~~d-------~~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~------~~~i~~~d  322 (515)
                      +++. -++..++.|+.+       ..+.+||..+.+-...-..+.+.  .+++. .+++.++.|+.      ...+.+||
T Consensus       104 ~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd  181 (318)
T 2woz_A          104 GLGE-VDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYN  181 (318)
T ss_dssp             EEEE-ETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEE
T ss_pred             ceEE-ECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEc
Confidence            2222 256677777753       24778888776544433333221  12222 45666666653      23588999


Q ss_pred             CCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCC-----CeEEEEEccCCe
Q psy17610        323 TCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGAD-----QIVKMWMYREGV  370 (515)
Q Consensus       323 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~  370 (515)
                      +.+.+-...-..+....-.+++. -++++++.|+.+     ..+.+||+.+.+
T Consensus       182 ~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~  233 (318)
T 2woz_A          182 PKKGDWKDLAPMKTPRSMFGVAI-HKGKIVIAGGVTEDGLSASVEAFDLKTNK  233 (318)
T ss_dssp             TTTTEEEEECCCSSCCBSCEEEE-ETTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred             CCCCEEEECCCCCCCcccceEEE-ECCEEEEEcCcCCCCccceEEEEECCCCe
Confidence            88765433222111111112222 256777777643     357788887653

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=97.54  E-value=0.012  Score=51.90  Aligned_cols=226  Identities=8%  Similarity=0.048  Sum_probs=114.8

Q ss_pred             CCCEEEEEeC----CCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecC----C-----CcEEEEEccCCce
Q psy17610        177 DGKAILSGWN----DGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGG----E-----GQVRIWKLTRESQ  243 (515)
Q Consensus       177 ~~~~l~~~~~----dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d-----~~i~iw~~~~~~~  243 (515)
                      ++..++.|+.    -..+.+||+.+++....-..+....-.+++.. ++..++.|+.    +     ..+.+||+.+...
T Consensus        24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W  102 (308)
T 1zgk_A           24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVV-GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQW  102 (308)
T ss_dssp             CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCEEEETTEEEECCCEEEEETTTTEE
T ss_pred             CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEE-CCEEEEECCCcCCCCCCeecceEEEECCCCCeE
Confidence            4555556553    23688899888765433211111111122222 5667777765    2     4688889866554


Q ss_pred             eeEEeeccccCceEEEEEecCCCEEEEEeCC-----CcEEEEEcccceEEEEEEcCcc--EEEEEEcCCCcEEEEEECC-
Q psy17610        244 SLQCVLKEHTSSVSVIQIKSDSKEAMSASTD-----GTCVLWDLIKSTRLIIMILPSM--IMSAAYHPSEVQLITCSTN-  315 (515)
Q Consensus       244 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~-  315 (515)
                      .....++........+.  -+++.++.|+.+     ..+.+||+.+.+-......+.+  -.+++.. ++..++.|+.+ 
T Consensus       103 ~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~  179 (308)
T 1zgk_A          103 SPCAPMSVPRNRIGVGV--IDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL-NRLLYAVGGFDG  179 (308)
T ss_dssp             EECCCCSSCCBTCEEEE--ETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCS
T ss_pred             eECCCCCcCccccEEEE--ECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE-CCEEEEEeCCCC
Confidence            44433332222222222  256666666543     3688899877654433222221  1122222 56666666653 


Q ss_pred             ----CeEEEEeCCCCceEEEEecCCC-ccEEEEEEcCCCCEEEEEcCC-----CeEEEEEccCCeeee--eccCCCCCee
Q psy17610        316 ----KMIDYWETCDGSIIRSLEGSDV-AAVNCVDFVDDGKYFLTGGAD-----QIVKMWMYREGVPCF--VGIGHAASIT  383 (515)
Q Consensus       316 ----~~i~~~d~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~--~~~~~~~~i~  383 (515)
                          ..+..||+.+.+-...-..+.. .....+.+  ++++++.|+.+     ..+.+||+.+.+-..  .+........
T Consensus       180 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~  257 (308)
T 1zgk_A          180 TNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALG  257 (308)
T ss_dssp             SCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCE
T ss_pred             CCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceE
Confidence                4588899877653322111111 11222222  67788888764     468999987764322  1211111122


Q ss_pred             EEEECCCCcEEEEEeCC-----CcEEEEeCCC
Q psy17610        384 KIKISPDKKVIVSVSAD-----GGIFLWTFPE  410 (515)
Q Consensus       384 ~~~~~~~~~~l~~~~~d-----g~i~iw~~~~  410 (515)
                      .+.+  ++++++.|+.+     ..+.+||+.+
T Consensus       258 ~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~  287 (308)
T 1zgk_A          258 ITVH--QGRIYVLGGYDGHTFLDSVECYDPDT  287 (308)
T ss_dssp             EEEE--TTEEEEECCBCSSCBCCEEEEEETTT
T ss_pred             EEEE--CCEEEEEcCcCCCcccceEEEEcCCC
Confidence            2222  56777777654     3466777654

>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A

Probab=97.53  E-value=0.0086  Score=62.25  Aligned_cols=261  Identities=10%  Similarity=0.077  Sum_probs=152.1

Q ss_pred             CCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEE
Q psy17610        230 EGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQL  309 (515)
Q Consensus       230 d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l  309 (515)
                      ..+|.|.|+..+.......+.+     .+.-.+|..+.++.-. ..++.++|+.+...+.....+.+|.--.|-.....-
T Consensus        47 ~~~vvIidl~~~~~~~rrpi~A-----dsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e~VvfWkWis~~~l~  120 (1630)
T 1xi4_A           47 QAQVVIIDMNDPSNPIRRPISA-----DSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA  120 (1630)
T ss_pred             CceEEEEECCCCCCcccccccc-----hhhccCCCcceEEEec-CCeEEEeehHHhhhhcccccCCCceEEEecCCCeeE
Confidence            3478888886543322222211     2333567766555544 678999999999999999988888877776655443


Q ss_pred             EEEECCCeEEEEeCCCC-ceEEEEecC---CCccEEEEEEcCCCCEEEEEc-------CCCeEEEEEccCCeeeeeccCC
Q psy17610        310 ITCSTNKMIDYWETCDG-SIIRSLEGS---DVAAVNCVDFVDDGKYFLTGG-------ADQIVKMWMYREGVPCFVGIGH  378 (515)
Q Consensus       310 ~~~~~~~~i~~~d~~~~-~~~~~~~~~---~~~~i~~~~~~~~~~~l~~~~-------~dg~i~i~d~~~~~~~~~~~~~  378 (515)
                      ++  .+..|+-|++... .+.+.+..+   ....|..-..+++.++++..+       -.|.+.+|..+.+ ..+.+.||
T Consensus       121 lV--T~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~iegh  197 (1630)
T 1xi4_A          121 LV--TDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGH  197 (1630)
T ss_pred             EE--cCCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc-cchhhhHh
Confidence            33  3457999999643 333333222   125677778888888877543       3478899988653 34455666


Q ss_pred             CCCeeEEEEC--C-CCcEEEEEeC---CCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccC
Q psy17610        379 AASITKIKIS--P-DKKVIVSVSA---DGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPS  452 (515)
Q Consensus       379 ~~~i~~~~~~--~-~~~~l~~~~~---dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~  452 (515)
                      .+.-..+...  + ....++.+..   .+.++|-++........   ....+.     ...............++..|+.
T Consensus       198 a~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~---~f~kk~-----~~~~~~~~~~~Dfpv~~~vs~k  269 (1630)
T 1xi4_A          198 AASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQ---PFPKKA-----VDVFFPPEAQNDFPVAMQISEK  269 (1630)
T ss_pred             HhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCC---CCcccc-----ccccCCcccccCcceEEEeccc
Confidence            6554444332  1 1223333322   26899998865411110   110000     0001111122345678888998


Q ss_pred             CcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeE
Q psy17610        453 EVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIV  508 (515)
Q Consensus       453 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v  508 (515)
                      ...+...+.-|.+++||+.+|.++..-+-.. .+|...+..+...-++.....|.|
T Consensus       270 ~g~iy~itk~G~~~~~d~~t~~~i~~~ris~-~~iF~~~~~~~~~g~~~vnr~G~v  324 (1630)
T 1xi4_A          270 HDVVFLITKYGYIHLYDLETGTCIYMNRISG-ETIFVTAPHEATAGIIGVNRKGQV  324 (1630)
T ss_pred             cCEEEEEecCceEEEEecccchhhhhccccC-CceEEeccCCCCCceEEEcCCceE
Confidence            8899999999999999999998876544332 444444433332233333344433

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=97.53  E-value=0.016  Score=51.08  Aligned_cols=228  Identities=9%  Similarity=0.033  Sum_probs=114.3

Q ss_pred             CCCEEEEEecC----ceEEEEECCCCceeEEeeccCcc-CeEEEEeCCCCcEEEEEec----C-----CcEEEEeCCCCc
Q psy17610         92 VNNKVFVGTVN----CEIFLIDMNSGFTLTLVNTCHTS-AIYDLQFPVNFSSVFATCS----K-----NDIRIWSVRTLN  157 (515)
Q Consensus        92 ~~~~l~~~~~d----~~i~iw~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~~~~~----d-----~~i~iw~~~~~~  157 (515)
                      ++.+++.|+.+    ..+.+||..+.. -......... .-.+++.. ++..++.++.    +     +.+.++|..+.+
T Consensus        24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~  101 (308)
T 1zgk_A           24 GRLIYTAGGYFRQSLSYLEAYNPSNGT-WLRLADLQVPRSGLAGCVV-GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ  101 (308)
T ss_dssp             CCCEEEECCBSSSBCCCEEEEETTTTE-EEECCCCSSCCBSCEEEEE-TTEEEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred             CCEEEEEeCcCCCCcceEEEEcCCCCe-EeECCCCCcccccceEEEE-CCEEEEECCCcCCCCCCeecceEEEECCCCCe
Confidence            45666666632    468999988742 2222110000 01122222 4555555554    2     458888887654


Q ss_pred             eeEE--EEecCeEEEEEEEeeCCCEEEEEeCC-----CeEEEEecCCCceEEEecCCCC-CCeEEEEEcCCCCEEEEecC
Q psy17610        158 ELLR--ISVMNMICACIVFTYDGKAILSGWND-----GFIRCFTPQSGKLKFIIPNAHN-RGVTALAITQDGTRLLSGGG  229 (515)
Q Consensus       158 ~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~  229 (515)
                      -...  +......-..+.  -+++.++.|+.+     ..+.+||+.+.+....-..... ..-..+.+  ++..++.|+.
T Consensus       102 W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~  177 (308)
T 1zgk_A          102 WSPCAPMSVPRNRIGVGV--IDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGF  177 (308)
T ss_dssp             EEECCCCSSCCBTCEEEE--ETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCB
T ss_pred             EeECCCCCcCccccEEEE--ECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCC
Confidence            2211  111111111122  256666666533     4688999988765433211111 11222222  5667777765


Q ss_pred             C-----CcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCC-----CcEEEEEcccceEEEEEEcCcc--E
Q psy17610        230 E-----GQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTD-----GTCVLWDLIKSTRLIIMILPSM--I  297 (515)
Q Consensus       230 d-----~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~--~  297 (515)
                      +     ..+.+||+..........++........+.+  +++.++.|+.+     ..+.+||+.+.+-......+.+  -
T Consensus       178 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~  255 (308)
T 1zgk_A          178 DGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSA  255 (308)
T ss_dssp             CSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBS
T ss_pred             CCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccc
Confidence            4     4688999876655444333322222222222  66677777654     4689999887654433222221  1


Q ss_pred             EEEEEcCCCcEEEEEECC-----CeEEEEeCCCCce
Q psy17610        298 MSAAYHPSEVQLITCSTN-----KMIDYWETCDGSI  328 (515)
Q Consensus       298 ~~~~~~~~~~~l~~~~~~-----~~i~~~d~~~~~~  328 (515)
                      .+++. -+++.++.|+.+     ..+.+||+.+.+-
T Consensus       256 ~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W  290 (308)
T 1zgk_A          256 LGITV-HQGRIYVLGGYDGHTFLDSVECYDPDTDTW  290 (308)
T ss_dssp             CEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEE
T ss_pred             eEEEE-ECCEEEEEcCcCCCcccceEEEEcCCCCEE
Confidence            12222 256666666643     3577788766543

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=97.52  E-value=0.0074  Score=53.19  Aligned_cols=192  Identities=11%  Similarity=0.110  Sum_probs=106.1

Q ss_pred             CEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEc--C-CCCEEEEe-cCCCcEEEEEccCCceeeEEeecc--c
Q psy17610        179 KAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAIT--Q-DGTRLLSG-GGEGQVRIWKLTRESQSLQCVLKE--H  252 (515)
Q Consensus       179 ~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~-~~~~l~~~-~~d~~i~iw~~~~~~~~~~~~~~~--~  252 (515)
                      ..+++++.||.|.-+|.++|+....+......++....-.  + ++..++.. +.||.+..++..++..+.......  .
T Consensus        11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~   90 (339)
T 2be1_A           11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS   90 (339)
T ss_dssp             EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred             CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence            3688999999999999999999988854321233221110  1 22333333 579999999975443322222221  1


Q ss_pred             cCceEE---EEE-----ecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEE--------EEEEc-----CCCcEEEE
Q psy17610        253 TSSVSV---IQI-----KSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIM--------SAAYH-----PSEVQLIT  311 (515)
Q Consensus       253 ~~~v~~---~~~-----~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~--------~~~~~-----~~~~~l~~  311 (515)
                      ..++..   ...     ...+..+++++.+|.+...|+++++.+..+....+..        +....     ..+..++.
T Consensus        91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~i  170 (339)
T 2be1_A           91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVI  170 (339)
T ss_dssp             TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEE
T ss_pred             ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEE
Confidence            112221   000     0145678899999999999999999999887653211        11110     12356777


Q ss_pred             EECCCeEEEEeCCCCceEEEEe-----cCCCc-cE-EEEEEcCCCCEEEEEcCCCeEEEEEccCCeeee
Q psy17610        312 CSTNKMIDYWETCDGSIIRSLE-----GSDVA-AV-NCVDFVDDGKYFLTGGADQIVKMWMYREGVPCF  373 (515)
Q Consensus       312 ~~~~~~i~~~d~~~~~~~~~~~-----~~~~~-~i-~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~  373 (515)
                      +..+..+.+.+ ++++ +..+.     ..... .+ ..-..+.|+.+ +.++.||.|.-+|..+|+.+.
T Consensus       171 g~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W  236 (339)
T 2be1_A          171 GKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARW  236 (339)
T ss_dssp             EEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred             ecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcEEE
Confidence            77777777766 4443 21111     10000 00 00001224555 446778888888887777665

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=97.47  E-value=0.05  Score=48.19  Aligned_cols=231  Identities=8%  Similarity=0.069  Sum_probs=125.7

Q ss_pred             CeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEE--Eec---CCCCCCeEEEEEcCC---CCEEEEe---cCCCcEE
Q psy17610        166 NMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKF--IIP---NAHNRGVTALAITQD---GTRLLSG---GGEGQVR  234 (515)
Q Consensus       166 ~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~--~~~---~~~~~~v~~~~~~~~---~~~l~~~---~~d~~i~  234 (515)
                      -.....++|.|+|..+++--..|.|++++..+++...  .++   .........|+++|+   +..|...   ..++.|.
T Consensus        31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~  110 (347)
T 3das_A           31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV  110 (347)
T ss_dssp             CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred             CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence            3445789999999866655448999999876665422  121   123566899999995   3444432   2345566


Q ss_pred             EEEccCC---------ceeeEEeec-cccCceEEEEEecCCCEEEEEeC-------------CCcEEEEEcccce-----
Q psy17610        235 IWKLTRE---------SQSLQCVLK-EHTSSVSVIQIKSDSKEAMSAST-------------DGTCVLWDLIKST-----  286 (515)
Q Consensus       235 iw~~~~~---------~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~-------------d~~i~iwd~~~~~-----  286 (515)
                      -|.+...         .......+. .....-..|.|.|||.+.++.+.             .|.|.-.+....-     
T Consensus       111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nP  190 (347)
T 3das_A          111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNP  190 (347)
T ss_dssp             EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCS
T ss_pred             EEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCC
Confidence            6665431         111111222 11123457999999987777543             2444444443210     


Q ss_pred             --EEEEEE-cCccEEEEEEcCCCcEEEEEEC-CC--eEEEEe--------CCCC--------ceEEEEecCCCccEEEEE
Q psy17610        287 --RLIIMI-LPSMIMSAAYHPSEVQLITCST-NK--MIDYWE--------TCDG--------SIIRSLEGSDVAAVNCVD  344 (515)
Q Consensus       287 --~~~~~~-~~~~~~~~~~~~~~~~l~~~~~-~~--~i~~~d--------~~~~--------~~~~~~~~~~~~~i~~~~  344 (515)
                        ....+. .......++|+|++.++++-.. ++  .|....        ...+        .++..+..++ .....++
T Consensus       191 f~~~~i~a~G~RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~-~ap~G~~  269 (347)
T 3das_A          191 FPGSPVYSYGHRNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDE-ASPSGIA  269 (347)
T ss_dssp             STTCCEEEBCCSBCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTT-CCEEEEE
T ss_pred             CCCCeEEeeCCCCcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCC-CCCcceE
Confidence              001111 2234678899998776554322 22  222221        0011        1122222221 2455677


Q ss_pred             EcCCCCEEEEEcCCCeEEEEEccCCee----eeeccCCCCCeeEEEECCCCcEEEEEe
Q psy17610        345 FVDDGKYFLTGGADQIVKMWMYREGVP----CFVGIGHAASITKIKISPDKKVIVSVS  398 (515)
Q Consensus       345 ~~~~~~~l~~~~~dg~i~i~d~~~~~~----~~~~~~~~~~i~~~~~~~~~~~l~~~~  398 (515)
                      |. +|.++...-..+.|....+.....    ...+.+....+..++..|||.++++.+
T Consensus       270 ~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td  326 (347)
T 3das_A          270 YA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS  326 (347)
T ss_dssp             EE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred             EE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence            76 466666666666676667655432    223344456889999999998766654

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=97.46  E-value=0.053  Score=48.07  Aligned_cols=244  Identities=10%  Similarity=0.019  Sum_probs=127.9

Q ss_pred             cCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEc-------CccEEEEEEcCC---CcEEEEEE---CCCeEE
Q psy17610        253 TSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMIL-------PSMIMSAAYHPS---EVQLITCS---TNKMID  319 (515)
Q Consensus       253 ~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-------~~~~~~~~~~~~---~~~l~~~~---~~~~i~  319 (515)
                      -.....++|.|+|..+++--..|.|++++...++.......       ......++++|+   +..|++..   .+..|.
T Consensus        31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~  110 (347)
T 3das_A           31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV  110 (347)
T ss_dssp             CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred             CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence            44567899999998766655589999998765554322221       345789999996   44554432   345666


Q ss_pred             EEeCCCC----------ceE-EEEecCCCccEEEEEEcCCCCEEEEEcC-------------CCeEEEEEccCC------
Q psy17610        320 YWETCDG----------SII-RSLEGSDVAAVNCVDFVDDGKYFLTGGA-------------DQIVKMWMYREG------  369 (515)
Q Consensus       320 ~~d~~~~----------~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~-------------dg~i~i~d~~~~------  369 (515)
                      -|....+          +.+ ..+..........++|.|||.++++.+.             .|.|.-++....      
T Consensus       111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nP  190 (347)
T 3das_A          111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNP  190 (347)
T ss_dssp             EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCS
T ss_pred             EEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCC
Confidence            6665441          111 1232211133457999999987777542             244444454321      


Q ss_pred             ---eeeeeccCCCCCeeEEEECCCCcEEEEEe-CCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCc-ccE
Q psy17610        370 ---VPCFVGIGHAASITKIKISPDKKVIVSVS-ADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILP-SMI  444 (515)
Q Consensus       370 ---~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i  444 (515)
                         ..+.. .+|. ....++|+|++.+.++=. .|+.=.|-.+.......-....-.   ..............+. ...
T Consensus       191 f~~~~i~a-~G~R-Np~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~---~~~~~~~~P~~~~~~~~~ap  265 (347)
T 3das_A          191 FPGSPVYS-YGHR-NVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGK---GGGSGFHDPVAQWSTDEASP  265 (347)
T ss_dssp             STTCCEEE-BCCS-BCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSS---CCCTTCCCCSEEECTTTCCE
T ss_pred             CCCCeEEe-eCCC-CcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCC---CCCccccCCcEecCCCCCCC
Confidence               11111 2444 346799999877555432 233223332322221100000000   0000000011111111 245


Q ss_pred             EEeeeccCCcEEEEeecCCeEEEEecCCCee----eeeecccccceEEEEEEcCCCcEEEEee
Q psy17610        445 MSAAYHPSEVQLITCSTNKMIDYWETCDGSI----IRSLEGSDVAAVNCVDFVDDGKYFLTGG  503 (515)
Q Consensus       445 ~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~----~~~~~~~~~~~v~~~~~s~~~~~l~s~~  503 (515)
                      ..++|. +|..+...-..+.|....+..+..    ...+.+.. .++..++..|||.++++.+
T Consensus       266 ~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~-gR~~dv~~~pDG~lyv~td  326 (347)
T 3das_A          266 SGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEY-GRLRTVAPAGGDKLWLVTS  326 (347)
T ss_dssp             EEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTS-SCEEEEEEEETTEEEEEEC
T ss_pred             cceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCC-CCccEEEECCCCcEEEEEc
Confidence            666776 455555555566676666655432    22333333 7899999999998776643

>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A

Probab=97.44  E-value=0.0097  Score=61.88  Aligned_cols=255  Identities=10%  Similarity=0.093  Sum_probs=148.6

Q ss_pred             CceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEE
Q psy17610        102 NCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAI  181 (515)
Q Consensus       102 d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  181 (515)
                      ..+|.|.|+.++..+.+....    -.+.-.+|..+ +++.-...++.|+|+++.+.+....-.. +|..=.|-.+. .|
T Consensus        47 ~~~vvIidl~~~~~~~rrpi~----AdsAIMnP~~~-iiALrag~~lQiFnl~~k~klks~~~~e-~VvfWkWis~~-~l  119 (1630)
T 1xi4_A           47 QAQVVIIDMNDPSNPIRRPIS----ADSAIMNPASK-VIALKAGKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLN-TV  119 (1630)
T ss_pred             CceEEEEECCCCCCccccccc----chhhccCCCcc-eEEEecCCeEEEeehHHhhhhcccccCC-CceEEEecCCC-ee
Confidence            347999999886554332111    12334677754 4444457899999999988888776544 45444554333 34


Q ss_pred             EEEeCCCeEEEEecCCCceEEEecCCC----CCCeEEEEEcCCCCEEEEec-------CCCcEEEEEccCCceeeEEeec
Q psy17610        182 LSGWNDGFIRCFTPQSGKLKFIIPNAH----NRGVTALAITQDGTRLLSGG-------GEGQVRIWKLTRESQSLQCVLK  250 (515)
Q Consensus       182 ~~~~~dg~i~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~-------~d~~i~iw~~~~~~~~~~~~~~  250 (515)
                      +..+ +..|.-|++........+...|    ...|..-..+++.++++..+       -.|.+.+|..+.   ...+.+.
T Consensus       120 ~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er---~~sQ~ie  195 (1630)
T 1xi4_A          120 ALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR---KVSQPIE  195 (1630)
T ss_pred             EEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccc---ccchhhh
Confidence            4443 4569999997533222221223    35577777788888877433       348899999753   3344566


Q ss_pred             cccCceEEEEEe--cC-CCEEEEEeC---CCcEEEEEcccc---e-----EEEEEEcC-----ccEEEEEEcCCCcEEEE
Q psy17610        251 EHTSSVSVIQIK--SD-SKEAMSAST---DGTCVLWDLIKS---T-----RLIIMILP-----SMIMSAAYHPSEVQLIT  311 (515)
Q Consensus       251 ~~~~~v~~~~~~--~~-~~~l~~~~~---d~~i~iwd~~~~---~-----~~~~~~~~-----~~~~~~~~~~~~~~l~~  311 (515)
                      ||......+...  +. ...+..+..   .+.+.+.++...   .     ....+..+     .-..++..++.-..+..
T Consensus       196 gha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~  275 (1630)
T 1xi4_A          196 GHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFL  275 (1630)
T ss_pred             HhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEE
Confidence            776655444432  11 122222222   267888887443   1     11111111     12566777888888889


Q ss_pred             EECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccC
Q psy17610        312 CSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYRE  368 (515)
Q Consensus       312 ~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~  368 (515)
                      .+.-|.+++||+.++.++..-+-.. ..|...+..+...-++.....|.|.-..+..
T Consensus       276 itk~G~~~~~d~~t~~~i~~~ris~-~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~  331 (1630)
T 1xi4_A          276 ITKYGYIHLYDLETGTCIYMNRISG-ETIFVTAPHEATAGIIGVNRKGQVLSVCVEE  331 (1630)
T ss_pred             EecCceEEEEecccchhhhhccccC-CceEEeccCCCCCceEEEcCCceEEEEEEcc
Confidence            9999999999999999887655443 4444333333322233344556555544443

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=97.40  E-value=0.014  Score=52.39  Aligned_cols=144  Identities=10%  Similarity=0.068  Sum_probs=91.5

Q ss_pred             CCcEEEEEecCCcEEEEeCCCCceeEEEEec----CeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCc-----------
Q psy17610        135 NFSSVFATCSKNDIRIWSVRTLNELLRISVM----NMICACIVFTYDGKAILSGWNDGFIRCFTPQSGK-----------  199 (515)
Q Consensus       135 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~-----------  199 (515)
                      +|..++.+- ++.||.-++.....-+.+...    -..+..+..+|+|++||..+. ..|.|..+..+.           
T Consensus        31 n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~  108 (452)
T 3pbp_A           31 NGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDA  108 (452)
T ss_dssp             TTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHT
T ss_pred             CCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccccc
Confidence            444444433 366666666644444445443    124677999999999988764 468888776321           


Q ss_pred             -eEEEecCC-----CCCCeEEEEEcC---CCCEEEEecCCCcEEEEEccCCceeeEEeec---------cccCceEEEEE
Q psy17610        200 -LKFIIPNA-----HNRGVTALAITQ---DGTRLLSGGGEGQVRIWKLTRESQSLQCVLK---------EHTSSVSVIQI  261 (515)
Q Consensus       200 -~~~~~~~~-----~~~~v~~~~~~~---~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~---------~~~~~v~~~~~  261 (515)
                       ....+..+     ...+|..+.|+|   .+..|++-..|+.|++||+......+. .+.         .....|.+++|
T Consensus       109 ~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~F  187 (452)
T 3pbp_A          109 FQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEF  187 (452)
T ss_dssp             TEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEE
T ss_pred             cceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEE
Confidence             11122111     357799999999   456899999999999999975333222 222         12256888999


Q ss_pred             ecCCCEEEEEe--CCCcEEEEE
Q psy17610        262 KSDSKEAMSAS--TDGTCVLWD  281 (515)
Q Consensus       262 ~~~~~~l~~~~--~d~~i~iwd  281 (515)
                      .+++-.|...+  ..|.|+-.-
T Consensus       188 g~~~lTLYvl~~t~~GDIYAlc  209 (452)
T 3pbp_A          188 SKDGLTLYCLNTTEGGDIFAFY  209 (452)
T ss_dssp             CTTSSCEEEEECTTSCEEEEES
T ss_pred             cCCCcEEEEEecCCCCCEEEEC
Confidence            88777676655  667666543

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=97.33  E-value=0.012  Score=53.22  Aligned_cols=239  Identities=10%  Similarity=-0.008  Sum_probs=112.7

Q ss_pred             CCCEEEEEec-CceEEEEECCCC-ceeEEe--ec-cCccCeEEEEeCCCCcEEEEEec-C---------CcEEEEeCCCC
Q psy17610         92 VNNKVFVGTV-NCEIFLIDMNSG-FTLTLV--NT-CHTSAIYDLQFPVNFSSVFATCS-K---------NDIRIWSVRTL  156 (515)
Q Consensus        92 ~~~~l~~~~~-d~~i~iw~~~~~-~~~~~~--~~-~h~~~v~~~~~~~~~~~l~~~~~-d---------~~i~iw~~~~~  156 (515)
                      ++.+++.|+. ...+.++|..+. ..-...  +. .....-..+.+  ++..++.++. +         +.+.+||..+.
T Consensus        19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~   96 (357)
T 2uvk_A           19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN   96 (357)
T ss_dssp             TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred             CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence            5666666654 357999998631 111111  11 01111122222  4556666554 2         45888888765


Q ss_pred             ceeEEEEec-CeEEEEEEEeeCCCEEEEEeCC---------------------------------------CeEEEEecC
Q psy17610        157 NELLRISVM-NMICACIVFTYDGKAILSGWND---------------------------------------GFIRCFTPQ  196 (515)
Q Consensus       157 ~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d---------------------------------------g~i~~~~~~  196 (515)
                      +-...-... .......+...+++.++.|+.+                                       ..+.+||+.
T Consensus        97 ~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~  176 (357)
T 2uvk_A           97 SWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPS  176 (357)
T ss_dssp             EEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETT
T ss_pred             cEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCC
Confidence            421111001 1111111222567777777754                                       578999998


Q ss_pred             CCceEEEecCCCCCCe-EEEEEcCCCCEEEEecC------CCcEEEEEc--cCCceeeEEeeccccCceEEEEEecCCCE
Q psy17610        197 SGKLKFIIPNAHNRGV-TALAITQDGTRLLSGGG------EGQVRIWKL--TRESQSLQCVLKEHTSSVSVIQIKSDSKE  267 (515)
Q Consensus       197 ~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~------d~~i~iw~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  267 (515)
                      +.+....-.......- .+++.. +++.++.|+.      ...+..||+  .+........+..........+...+++.
T Consensus       177 ~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i  255 (357)
T 2uvk_A          177 TQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSL  255 (357)
T ss_dssp             TTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEETTEE
T ss_pred             CCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEEECCEE
Confidence            8765443222211111 222322 5666677664      235777876  33333333222211111111122345667


Q ss_pred             EEEEeCC----------------------CcEEEEEcccceEEEEEEcCcc-EEEEEEcCCCcEEEEEECCC------eE
Q psy17610        268 AMSASTD----------------------GTCVLWDLIKSTRLIIMILPSM-IMSAAYHPSEVQLITCSTNK------MI  318 (515)
Q Consensus       268 l~~~~~d----------------------~~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~------~i  318 (515)
                      ++.|+.+                      ..+.+||+.+.+-...-..+.+ ....+...+++.++.|+.++      .+
T Consensus       256 yv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~v  335 (357)
T 2uvk_A          256 IFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGGETAGGKAVTDS  335 (357)
T ss_dssp             EEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEEETTEEEEEEEECGGGCEEEEE
T ss_pred             EEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeEEeCCEEEEEeeeCCCCCEeeeE
Confidence            7777632                      2477888876543333333321 11222334677777777542      35


Q ss_pred             EEEeCCCCceEEEEe
Q psy17610        319 DYWETCDGSIIRSLE  333 (515)
Q Consensus       319 ~~~d~~~~~~~~~~~  333 (515)
                      .++++++++.+....
T Consensus       336 ~~l~~~~~~~~~~~~  350 (357)
T 2uvk_A          336 VLITVKDNKVTVQNL  350 (357)
T ss_dssp             EEEEC-CCSCEEEC-
T ss_pred             EEEEEcCcEeEeeec
Confidence            666777777665544

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=97.31  E-value=0.03  Score=45.26  Aligned_cols=104  Identities=9%  Similarity=-0.023  Sum_probs=65.8

Q ss_pred             cEEEEEEcCCCcEEEEEECCCeEEEEeCCCCce------EEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCC
Q psy17610        296 MIMSAAYHPSEVQLITCSTNKMIDYWETCDGSI------IRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREG  369 (515)
Q Consensus       296 ~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~  369 (515)
                      .+..++|+|++.+.++  .+|.++-.+..+...      -..+-...-....++.|.|+|.+.++  .||.|+-++..+.
T Consensus        42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~  117 (236)
T 1tl2_A           42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQS  117 (236)
T ss_dssp             TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCS
T ss_pred             cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcC
Confidence            6779999998886666  778888777655221      12222111122478999999998887  5698887775332


Q ss_pred             eeee-------eccCCCCCeeEEEECCCCcEEEEEeCCCcEEE
Q psy17610        370 VPCF-------VGIGHAASITKIKISPDKKVIVSVSADGGIFL  405 (515)
Q Consensus       370 ~~~~-------~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i  405 (515)
                      ..-.       .-..-=..+..|.+.|+|.+.+..  |+.+.-
T Consensus       118 ~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr  158 (236)
T 1tl2_A          118 DTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYK  158 (236)
T ss_dssp             TTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEE
T ss_pred             CCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEe
Confidence            1110       001111467999999999877666  777543

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=97.27  E-value=0.033  Score=49.25  Aligned_cols=181  Identities=11%  Similarity=0.014  Sum_probs=87.2

Q ss_pred             eEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec----CC-------cEEEEeCCCCceeEEEEecCeEE-EE
Q psy17610        104 EIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS----KN-------DIRIWSVRTLNELLRISVMNMIC-AC  171 (515)
Q Consensus       104 ~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~----d~-------~i~iw~~~~~~~~~~~~~~~~~v-~~  171 (515)
                      .+..||..+++-...........-.......++..++.++.    ++       .+..+|..+.+-...-....... .+
T Consensus        25 ~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~  104 (318)
T 2woz_A           25 AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFG  104 (318)
T ss_dssp             EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCE
T ss_pred             ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccc
Confidence            37888888753222211111111222223345566777762    11       16677877654221101011110 11


Q ss_pred             EEEeeCCCEEEEEeCC-------CeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecC------CCcEEEEEc
Q psy17610        172 IVFTYDGKAILSGWND-------GFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGG------EGQVRIWKL  238 (515)
Q Consensus       172 ~~~~~~~~~l~~~~~d-------g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------d~~i~iw~~  238 (515)
                      ++ .-++..++.|+.+       ..+.+||+.+.+....-..+....-.+++. .+++.++.|+.      -..+.+||+
T Consensus       105 ~~-~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~  182 (318)
T 2woz_A          105 LG-EVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNP  182 (318)
T ss_dssp             EE-EETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEET
T ss_pred             eE-EECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcC
Confidence            11 1256666677653       357888988876554321111111112222 35667777764      235899998


Q ss_pred             cCCceeeEEeeccccCceEEEEEecCCCEEEEEeCC-----CcEEEEEcccceEE
Q psy17610        239 TRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTD-----GTCVLWDLIKSTRL  288 (515)
Q Consensus       239 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~  288 (515)
                      .+........++...... +++. -+++.++.|+.+     ..+.+||+.+.+-.
T Consensus       183 ~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~  235 (318)
T 2woz_A          183 KKGDWKDLAPMKTPRSMF-GVAI-HKGKIVIAGGVTEDGLSASVEAFDLKTNKWE  235 (318)
T ss_dssp             TTTEEEEECCCSSCCBSC-EEEE-ETTEEEEEEEEETTEEEEEEEEEETTTCCEE
T ss_pred             CCCEEEECCCCCCCcccc-eEEE-ECCEEEEEcCcCCCCccceEEEEECCCCeEE
Confidence            766555443333222222 2222 356777777653     34678888776543

>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A

Probab=97.21  E-value=0.14  Score=47.70  Aligned_cols=225  Identities=16%  Similarity=0.197  Sum_probs=138.6

Q ss_pred             EEEecCCcEEEEeCCCCceeEEEEecC-------------------------eEE--EEEEEe---eCCCEEEEEeC-CC
Q psy17610        140 FATCSKNDIRIWSVRTLNELLRISVMN-------------------------MIC--ACIVFT---YDGKAILSGWN-DG  188 (515)
Q Consensus       140 ~~~~~d~~i~iw~~~~~~~~~~~~~~~-------------------------~~v--~~~~~~---~~~~~l~~~~~-dg  188 (515)
                      .+++..|.++|+-+.+++++.++....                         +..  ..+++.   .||++|+.-.. +.
T Consensus        74 ~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdkan~  153 (638)
T 3sbq_A           74 WSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKANS  153 (638)
T ss_dssp             EECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETTTT
T ss_pred             eecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCCCc
Confidence            344448999999999999888874210                         001  123332   36788888764 56


Q ss_pred             eEEEEecCCCceEEEecCCCCCCeEEEEEc--CCCCEEEEecC-------CCcEEEEEccCCc-eeeEEeecccc-----
Q psy17610        189 FIRCFTPQSGKLKFIIPNAHNRGVTALAIT--QDGTRLLSGGG-------EGQVRIWKLTRES-QSLQCVLKEHT-----  253 (515)
Q Consensus       189 ~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~-------d~~i~iw~~~~~~-~~~~~~~~~~~-----  253 (515)
                      .|...+++..++...+..+....+..++|-  |+..+++.+++       ||..  ..++... ......+.+.+     
T Consensus       154 RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~--~~~~~~~~y~~f~~iD~~tm~v~~  231 (638)
T 3sbq_A          154 RVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKV--FDLQDENSYTMYNAIDAETMEMAF  231 (638)
T ss_dssp             EEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSC--CCTTSTTEEEEEEEEETTTCSEEE
T ss_pred             ceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcc--cccCChhhceEEEEEcCCccEEEE
Confidence            788889999888777766788889999996  67788887764       2221  1001110 00000011111     


Q ss_pred             -----CceEEEEEecCCCEEEEEeCCC----------------------------------------cEEEEEccc----
Q psy17610        254 -----SSVSVIQIKSDSKEAMSASTDG----------------------------------------TCVLWDLIK----  284 (515)
Q Consensus       254 -----~~v~~~~~~~~~~~l~~~~~d~----------------------------------------~i~iwd~~~----  284 (515)
                           +....+...+++++.++.+.+.                                        .+.+.|.+.    
T Consensus       232 Qv~v~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv~ViD~~~~~~~  311 (638)
T 3sbq_A          232 QVIVDGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTPVLDGRKKDGK  311 (638)
T ss_dssp             EEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSCBTTB
T ss_pred             EEEcCCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCeeEEcccccccc
Confidence                 1222334456677766655321                                        233444433    


Q ss_pred             -ceEEEEEEcCccEEEEEEcCCCcEEEEEEC-CCeEEEEeCCCC------ce-------EEEEecCCCccEEEEEEcCCC
Q psy17610        285 -STRLIIMILPSMIMSAAYHPSEVQLITCST-NKMIDYWETCDG------SI-------IRSLEGSDVAAVNCVDFVDDG  349 (515)
Q Consensus       285 -~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~i~~~d~~~~------~~-------~~~~~~~~~~~i~~~~~~~~~  349 (515)
                       ......+..+.....+..+|||+++++++. +.++.++|....      +.       ..+.+.  .-.....+|.++|
T Consensus       312 ~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~--GlGPlHt~Fd~~G  389 (638)
T 3sbq_A          312 DSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPEL--GLGPLHTTFDGRG  389 (638)
T ss_dssp             CCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBC--CSCEEEEEECSSS
T ss_pred             CCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccC--CCcccEEEECCCC
Confidence             123344455566788899999999988765 788999998742      11       223332  2456788999999


Q ss_pred             CEEEEEcCCCeEEEEEccC
Q psy17610        350 KYFLTGGADQIVKMWMYRE  368 (515)
Q Consensus       350 ~~l~~~~~dg~i~i~d~~~  368 (515)
                      ....+-.-|..|.-|++..
T Consensus       390 ~aYTtlfidSqvvkWni~~  408 (638)
T 3sbq_A          390 NAYTTLFIDSQVVKWNMEE  408 (638)
T ss_dssp             EEEEEETTTTEEEEEEHHH
T ss_pred             ceEeeeeecceEEEEeccH
Confidence            7667777899999999865

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=97.14  E-value=0.039  Score=49.76  Aligned_cols=193  Identities=10%  Similarity=0.052  Sum_probs=95.8

Q ss_pred             CCCEEEEEeC-C---------CeEEEEecCCCceEEEecCC-CCCCeEEEEEcCCCCEEEEecCC---------------
Q psy17610        177 DGKAILSGWN-D---------GFIRCFTPQSGKLKFIIPNA-HNRGVTALAITQDGTRLLSGGGE---------------  230 (515)
Q Consensus       177 ~~~~l~~~~~-d---------g~i~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d---------------  230 (515)
                      +++.++.|+. +         ..+.+||+.+.+........ ....-.++.. .+++.++.|+.+               
T Consensus        65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~  143 (357)
T 2uvk_A           65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFV-HNGKAYVTGGVNQNIFNGYFEDLNEAG  143 (357)
T ss_dssp             TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEE-ETTEEEEEECCCHHHHHHHHHHHHHHT
T ss_pred             CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEE-ECCEEEEEeCcCCCcCcccccchhhcC
Confidence            5666666655 1         46889999887654432211 1111122222 467777788754               


Q ss_pred             ------------------------CcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeC------CCcEEEE
Q psy17610        231 ------------------------GQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST------DGTCVLW  280 (515)
Q Consensus       231 ------------------------~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------d~~i~iw  280 (515)
                                              ..+.+||..+........++.....-.+++. -+++.++.|+.      ...+..+
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~  222 (357)
T 2uvk_A          144 KDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFEL  222 (357)
T ss_dssp             TCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEEEE
T ss_pred             CcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceEEE
Confidence                                    4788999876666655444321111122332 25566666653      2356777


Q ss_pred             Ec--ccceEEEEEEcCcc---EEEEEEcCCCcEEEEEECC----------------------CeEEEEeCCCCceEE--E
Q psy17610        281 DL--IKSTRLIIMILPSM---IMSAAYHPSEVQLITCSTN----------------------KMIDYWETCDGSIIR--S  331 (515)
Q Consensus       281 d~--~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~----------------------~~i~~~d~~~~~~~~--~  331 (515)
                      |+  .+.+-......+.+   ....+...+++.++.|+.+                      ..+.+||+.+.+-..  .
T Consensus       223 d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~  302 (357)
T 2uvk_A          223 DFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGE  302 (357)
T ss_dssp             ECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEE
T ss_pred             EecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCC
Confidence            76  33332221111111   1111233356666666532                      257789987654332  2


Q ss_pred             EecCCCccEEEEEEcCCCCEEEEEcCCC------eEEEEEccCCeeeee
Q psy17610        332 LEGSDVAAVNCVDFVDDGKYFLTGGADQ------IVKMWMYREGVPCFV  374 (515)
Q Consensus       332 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg------~i~i~d~~~~~~~~~  374 (515)
                      +.... ...  .+...++++++.|+.++      .+.++++++++.+..
T Consensus       303 ~p~~r-~~~--~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~  348 (357)
T 2uvk_A          303 LSQGR-AYG--VSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQ  348 (357)
T ss_dssp             CSSCC-BSS--EEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEE
T ss_pred             CCCCc-ccc--eeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEee
Confidence            22221 111  22334678888888543      456667777665543

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=96.92  E-value=0.11  Score=48.47  Aligned_cols=60  Identities=15%  Similarity=0.094  Sum_probs=39.6

Q ss_pred             ccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCee--eeeccC------CCCCeeEEEECCC---CcEEEEE
Q psy17610        338 AAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVP--CFVGIG------HAASITKIKISPD---KKVIVSV  397 (515)
Q Consensus       338 ~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~------~~~~i~~~~~~~~---~~~l~~~  397 (515)
                      .....|+|.|+|+++++-...+.|++++..+++.  +..+..      .......|+|+|+   +..|..+
T Consensus        27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~   97 (454)
T 1cru_A           27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYIS   97 (454)
T ss_dssp             SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEE
T ss_pred             CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEE
Confidence            5667999999999777765555788887654533  222221      2456779999995   4444444

>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}

Probab=96.86  E-value=0.2  Score=43.57  Aligned_cols=242  Identities=7%  Similarity=0.028  Sum_probs=134.4

Q ss_pred             CCCCcEEEEEec--CCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCC--------------CeEEEEecC
Q psy17610        133 PVNFSSVFATCS--KNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWND--------------GFIRCFTPQ  196 (515)
Q Consensus       133 ~~~~~~l~~~~~--d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------------g~i~~~~~~  196 (515)
                      ++++..+.....  ++.|...+.+ |.....+...  .  +--+++++++|+-+...              ..|+..+++
T Consensus        22 ~~~g~~iy~~n~~d~~~ly~~~~d-g~~~~~l~~~--~--~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~d   96 (302)
T 3s25_A           22 CESDGEVFFSNTNDNGRLYAMNID-GSNIHKLSND--T--AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRN   96 (302)
T ss_dssp             EEETTEEEEEEGGGTTEEEEEETT-SCSCEEEEEE--E--EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETT
T ss_pred             EEeCCEEEEEeCCCCceEEEEcCC-CCCCEEccCC--c--eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCC
Confidence            345667766653  4556666654 3344445432  2  24568899988877543              367777877


Q ss_pred             CCceEEEecCCCCCCeEEEEEcCCCCEEEEec--CCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeC-
Q psy17610        197 SGKLKFIIPNAHNRGVTALAITQDGTRLLSGG--GEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST-  273 (515)
Q Consensus       197 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-  273 (515)
                      .++..... .   ..  ...|+++++.|+-..  .++.-.||.+........ .+..+..    .+++++++.|+..+. 
T Consensus        97 g~~~~~l~-~---~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~-~lt~~~~----~~~~~~g~~iy~t~~g  165 (302)
T 3s25_A           97 GHGSTVLD-P---DP--CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKK-KIKNHYL----FTCNTSDRYFYYNNPK  165 (302)
T ss_dssp             SCCCEEEE-C---SC--EEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCE-EEESSCC----CCSEEETTEEEEECTT
T ss_pred             CCcceEee-c---CC--ccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeE-EEeCCCc----eEeeEECCEEEEEeCC
Confidence            76644332 1   11  236777888888665  344444554432322222 2222222    346788888887665 


Q ss_pred             CCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECC--CeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCE
Q psy17610        274 DGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTN--KMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKY  351 (515)
Q Consensus       274 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  351 (515)
                      ...|...++..+.......  .... ..+.|++.+|+-....  ..|..-++..... ..+..   ..+  ..++|++++
T Consensus       166 ~~~Iy~~~l~g~~~~~l~~--~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~-~~Lt~---~~~--~~~~~~g~~  236 (302)
T 3s25_A          166 NGQLYRYDTASQSEALFYD--CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNP-VVLTE---ANI--EHYNVYGSL  236 (302)
T ss_dssp             TCCEEEEETTTTEEEEEEC--SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCC-EECSC---SCE--EEEEEETTE
T ss_pred             CceEEEEECCCCCEEEEeC--CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCe-EEEeC---CCc--ceEEECCCE
Confidence            5788888887666554433  2222 3456899888876654  3677777765543 33322   223  347788888


Q ss_pred             EEEEc--CCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeC-CCcEE
Q psy17610        352 FLTGG--ADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSA-DGGIF  404 (515)
Q Consensus       352 l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~  404 (515)
                      |+...  ..+.|..-++..........+   .+..  +++.+.+|+-... .+.|.
T Consensus       237 Iy~~~~~~~~~i~~~~~DG~~r~~l~~~---~~~~--i~i~~d~Iy~td~~~~~i~  287 (302)
T 3s25_A          237 IFYQRGGDNPALCVVKNDGTGFKELAKG---EFCN--INVTSQYVYFTDFVSNKEY  287 (302)
T ss_dssp             EEEEECSSSCEEEEEETTSCCCEEEEES---CEEE--EEECSSEEEEEETTTCCEE
T ss_pred             EEEEECCCCcEEEEEECCCCccEEeeCC---ccce--EEEeCCEEEEEECCCCeEE
Confidence            87653  345677777754332222222   2333  3445566665543 34443

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*

Probab=96.75  E-value=0.15  Score=50.48  Aligned_cols=195  Identities=13%  Similarity=0.121  Sum_probs=104.9

Q ss_pred             CCcEEEEEecC----CcEEEEeCCCCceeEEE-E-----ecCe-EEEEEEEee-CCCEEEEEeCC------CeEEEEecC
Q psy17610        135 NFSSVFATCSK----NDIRIWSVRTLNELLRI-S-----VMNM-ICACIVFTY-DGKAILSGWND------GFIRCFTPQ  196 (515)
Q Consensus       135 ~~~~l~~~~~d----~~i~iw~~~~~~~~~~~-~-----~~~~-~v~~~~~~~-~~~~l~~~~~d------g~i~~~~~~  196 (515)
                      ++..++.++.+    +.+.++|..+++-...- .     .... .-.+++..+ +++.++.|+.+      ..+.+||+.
T Consensus       397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~  476 (695)
T 2zwa_A          397 GNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMK  476 (695)
T ss_dssp             SSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETT
T ss_pred             CCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCC
Confidence            45566666542    45888888776532221 1     0111 112233333 66677777643      357889988


Q ss_pred             CCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCC--cEEEEEccCCceeeEEe---eccccCceEEEEEecC-CCEEEE
Q psy17610        197 SGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEG--QVRIWKLTRESQSLQCV---LKEHTSSVSVIQIKSD-SKEAMS  270 (515)
Q Consensus       197 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~iw~~~~~~~~~~~~---~~~~~~~v~~~~~~~~-~~~l~~  270 (515)
                      +.+....-.......-.+++...++..++.|+.++  .+.+||..+........   .+........+.+..+ ++.++.
T Consensus       477 t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~  556 (695)
T 2zwa_A          477 TREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIIL  556 (695)
T ss_dssp             TTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEE
T ss_pred             CCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEE
Confidence            87654332111111122333334788888887654  68999987665544432   2222222233555555 566677


Q ss_pred             EeC--C-----CcEEEEEcccce------EEEEEEcC-c--cEEEEEEcCCCcEEEEEEC--------CCeEEEEeCCCC
Q psy17610        271 AST--D-----GTCVLWDLIKST------RLIIMILP-S--MIMSAAYHPSEVQLITCST--------NKMIDYWETCDG  326 (515)
Q Consensus       271 ~~~--d-----~~i~iwd~~~~~------~~~~~~~~-~--~~~~~~~~~~~~~l~~~~~--------~~~i~~~d~~~~  326 (515)
                      |+.  +     ..+..||+.+.+      -......+ .  .-.+++...+++.++.|+.        ...+.+||+.+.
T Consensus       557 GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~  636 (695)
T 2zwa_A          557 GGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSE  636 (695)
T ss_dssp             CCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTT
T ss_pred             CCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCC
Confidence            765  2     358899988776      22222211 1  1223333333677777764        345899999877


Q ss_pred             ceE
Q psy17610        327 SII  329 (515)
Q Consensus       327 ~~~  329 (515)
                      +-.
T Consensus       637 ~W~  639 (695)
T 2zwa_A          637 TLT  639 (695)
T ss_dssp             EEE
T ss_pred             eEE
Confidence            544

>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}

Probab=96.75  E-value=0.25  Score=43.04  Aligned_cols=210  Identities=10%  Similarity=0.096  Sum_probs=121.1

Q ss_pred             ecCCCEEEEEe--cCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecC--------------CcEEEEeC
Q psy17610         90 NPVNNKVFVGT--VNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSK--------------NDIRIWSV  153 (515)
Q Consensus        90 s~~~~~l~~~~--~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d--------------~~i~iw~~  153 (515)
                      ++++.+|+...  .++.|...+.+.. ...++..   .  .+--+++++.+|+.+...              ..|+..++
T Consensus        22 ~~~g~~iy~~n~~d~~~ly~~~~dg~-~~~~l~~---~--~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~   95 (302)
T 3s25_A           22 CESDGEVFFSNTNDNGRLYAMNIDGS-NIHKLSN---D--TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKR   95 (302)
T ss_dssp             EEETTEEEEEEGGGTTEEEEEETTSC-SCEEEEE---E--EEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEET
T ss_pred             EEeCCEEEEEeCCCCceEEEEcCCCC-CCEEccC---C--ceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeC
Confidence            45677777765  2567888887653 3444432   1  123457888898888763              35777777


Q ss_pred             CCCceeEEEEecCeEEEEEEEeeCCCEEEEEe----CCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecC
Q psy17610        154 RTLNELLRISVMNMICACIVFTYDGKAILSGW----NDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGG  229 (515)
Q Consensus       154 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  229 (515)
                      +.++. ..+....    +..|+++++.|+-..    ....|...++...+.....  .+..    ..++++++.|.-.+.
T Consensus        96 dg~~~-~~l~~~~----~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt--~~~~----~~~~~~g~~iy~t~~  164 (302)
T 3s25_A           96 NGHGS-TVLDPDP----CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIK--NHYL----FTCNTSDRYFYYNNP  164 (302)
T ss_dssp             TSCCC-EEEECSC----EEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEE--SSCC----CCSEEETTEEEEECT
T ss_pred             CCCcc-eEeecCC----ccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEe--CCCc----eEeeEECCEEEEEeC
Confidence            76543 3333222    236788999988776    3445666677654443333  2222    345677887775554


Q ss_pred             -CCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCC--cEEEEEcccceEEEEEEcCccEEEEEEcCCC
Q psy17610        230 -EGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDG--TCVLWDLIKSTRLIIMILPSMIMSAAYHPSE  306 (515)
Q Consensus       230 -d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  306 (515)
                       ...|..-++.....+.+  +.+   ... ..+.|++.+|+-....+  .|..-++........  ....+  ..++|++
T Consensus       165 g~~~Iy~~~l~g~~~~~l--~~~---~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~L--t~~~~--~~~~~~g  234 (302)
T 3s25_A          165 KNGQLYRYDTASQSEALF--YDC---NCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVVL--TEANI--EHYNVYG  234 (302)
T ss_dssp             TTCCEEEEETTTTEEEEE--ECS---CEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCCEEC--SCSCE--EEEEEET
T ss_pred             CCceEEEEECCCCCEEEE--eCC---Ccc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCeEEE--eCCCc--ceEEECC
Confidence             56777777754332222  222   222 34568888888766543  566666654443222  22233  3377888


Q ss_pred             cEEEEEEC--CCeEEEEeCCCC
Q psy17610        307 VQLITCST--NKMIDYWETCDG  326 (515)
Q Consensus       307 ~~l~~~~~--~~~i~~~d~~~~  326 (515)
                      .+|+.+..  .+.|...++...
T Consensus       235 ~~Iy~~~~~~~~~i~~~~~DG~  256 (302)
T 3s25_A          235 SLIFYQRGGDNPALCVVKNDGT  256 (302)
T ss_dssp             TEEEEEECSSSCEEEEEETTSC
T ss_pred             CEEEEEECCCCcEEEEEECCCC
Confidence            88876533  356666666443

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*

Probab=96.73  E-value=0.14  Score=50.70  Aligned_cols=197  Identities=15%  Similarity=0.111  Sum_probs=103.9

Q ss_pred             cCCCEEEEEecC----ceEEEEECCCCceeEEe-e------ccCccCeEEEEeCCCCcEEEEEecC------CcEEEEeC
Q psy17610         91 PVNNKVFVGTVN----CEIFLIDMNSGFTLTLV-N------TCHTSAIYDLQFPVNFSSVFATCSK------NDIRIWSV  153 (515)
Q Consensus        91 ~~~~~l~~~~~d----~~i~iw~~~~~~~~~~~-~------~~h~~~v~~~~~~~~~~~l~~~~~d------~~i~iw~~  153 (515)
                      .++..++.|+.+    ..+.+||..++.-.... .      ......-..+.+..++..++.++.+      +.+.+||.
T Consensus       396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~  475 (695)
T 2zwa_A          396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM  475 (695)
T ss_dssp             CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred             ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence            467777777753    46889998875322221 0      1111112223332266666666643      34788888


Q ss_pred             CCCceeEE--EEecCeEEEEEEEeeCCCEEEEEeCCC--eEEEEecCCCceEEEecC----CCCCCeEEEEEcCC-CCEE
Q psy17610        154 RTLNELLR--ISVMNMICACIVFTYDGKAILSGWNDG--FIRCFTPQSGKLKFIIPN----AHNRGVTALAITQD-GTRL  224 (515)
Q Consensus       154 ~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~-~~~l  224 (515)
                      .+.+-...  +...... .+++...++..++.|+.++  .+.+||+.+.+....-..    .......++.+..+ ++.+
T Consensus       476 ~t~~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iy  554 (695)
T 2zwa_A          476 KTREWSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGI  554 (695)
T ss_dssp             TTTEEEECCCCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEE
T ss_pred             CCCcEEECCCCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEE
Confidence            77432111  1111111 1222223778888877654  689999988775543210    01122233555554 6677


Q ss_pred             EEecC--C-----CcEEEEEccCCc------eeeEEeeccccCceEEEEEecCCCEEEEEeC--------CCcEEEEEcc
Q psy17610        225 LSGGG--E-----GQVRIWKLTRES------QSLQCVLKEHTSSVSVIQIKSDSKEAMSAST--------DGTCVLWDLI  283 (515)
Q Consensus       225 ~~~~~--d-----~~i~iw~~~~~~------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--------d~~i~iwd~~  283 (515)
                      +.|+.  +     ..+..||+....      .............-..+....+++.++.|+.        ...+.+||+.
T Consensus       555 v~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~  634 (695)
T 2zwa_A          555 ILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPL  634 (695)
T ss_dssp             EECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETT
T ss_pred             EECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECC
Confidence            77765  2     358899987665      3333221111111123333344677777774        3468999998


Q ss_pred             cceEE
Q psy17610        284 KSTRL  288 (515)
Q Consensus       284 ~~~~~  288 (515)
                      +.+-.
T Consensus       635 t~~W~  639 (695)
T 2zwa_A          635 SETLT  639 (695)
T ss_dssp             TTEEE
T ss_pred             CCeEE
Confidence            77654

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=96.64  E-value=0.43  Score=44.35  Aligned_cols=105  Identities=13%  Similarity=0.037  Sum_probs=60.9

Q ss_pred             CCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeecc------ccCceEEEEEecC---CCEEEEEeC-------
Q psy17610        210 RGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKE------HTSSVSVIQIKSD---SKEAMSAST-------  273 (515)
Q Consensus       210 ~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~------~~~~v~~~~~~~~---~~~l~~~~~-------  273 (515)
                      .....|+|.|+|+++++-...+.|++++...........+..      .......++++|+   +..|+.+..       
T Consensus        27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~  106 (454)
T 1cru_A           27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST  106 (454)
T ss_dssp             SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred             CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence            456799999999977765444568888754333332322221      2355678999995   555554432       


Q ss_pred             ------CCcEEEEEcccc-------eEEEE-EEc--CccEEEEEEcCCCcEEEEEEC
Q psy17610        274 ------DGTCVLWDLIKS-------TRLII-MIL--PSMIMSAAYHPSEVQLITCST  314 (515)
Q Consensus       274 ------d~~i~iwd~~~~-------~~~~~-~~~--~~~~~~~~~~~~~~~l~~~~~  314 (515)
                            ...|.-++....       +.+.. +..  ......++|.|++.+.++.+.
T Consensus       107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd  163 (454)
T 1cru_A          107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD  163 (454)
T ss_dssp             -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred             ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence                  124555554321       11111 111  134788999999987776543

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=94.92  E-value=2.4  Score=39.40  Aligned_cols=228  Identities=10%  Similarity=0.092  Sum_probs=114.7

Q ss_pred             CcEEEEEEecCCC-EEEEEecCceEEEEECCCCc---eeEEe----ec----cCccCeEEEEeCCC---CcEEEEE-ec-
Q psy17610         82 SGISSLQYNPVNN-KVFVGTVNCEIFLIDMNSGF---TLTLV----NT----CHTSAIYDLQFPVN---FSSVFAT-CS-  144 (515)
Q Consensus        82 ~~v~~~~~s~~~~-~l~~~~~d~~i~iw~~~~~~---~~~~~----~~----~h~~~v~~~~~~~~---~~~l~~~-~~-  144 (515)
                      .....|+|.|+|. .|+++...|.|++++.+...   .+..+    ..    +.......|+|+|+   ..+|++. +. 
T Consensus        14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~   93 (463)
T 2wg3_C           14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN   93 (463)
T ss_dssp             SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred             CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence            5567999999996 56667788999999754321   11111    11    12456889999996   2244333 22 


Q ss_pred             -C----------CcEEEEeCCC----------CceeEEEEe--cCeEEEEEEEeeCCCEEEEEeCC--------------
Q psy17610        145 -K----------NDIRIWSVRT----------LNELLRISV--MNMICACIVFTYDGKAILSGWND--------------  187 (515)
Q Consensus       145 -d----------~~i~iw~~~~----------~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d--------------  187 (515)
                       +          ..|.-|.+..          .+.+..+..  ....-..++|.|||.+.++.+..              
T Consensus        94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~~~~~~~~~~q~~~  173 (463)
T 2wg3_C           94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGMITLDDMEEMDGLS  173 (463)
T ss_dssp             CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTTCCHHHHHHCTTCC
T ss_pred             CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCCCCCCccccccCcC
Confidence             1          1344465542          122333321  11235789999999877665543              


Q ss_pred             ---CeEEEEecCCC---------------------ceEEEecCCCCCCeEEEEEcCC-----CC-EEEEecCCC----cE
Q psy17610        188 ---GFIRCFTPQSG---------------------KLKFIIPNAHNRGVTALAITQD-----GT-RLLSGGGEG----QV  233 (515)
Q Consensus       188 ---g~i~~~~~~~~---------------------~~~~~~~~~~~~~v~~~~~~~~-----~~-~l~~~~~d~----~i  233 (515)
                         |.|.-.+.+..                     ..+..  .+|.. ...++|+|.     |+ ++..+...|    .-
T Consensus       174 ~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a--~G~RN-p~gla~dp~tg~~~G~l~~~~~D~~G~~~~~~  250 (463)
T 2wg3_C          174 DFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFA--HGLHD-PGRCAVDRHPTDININLTILCSDSNGKNRSSA  250 (463)
T ss_dssp             SCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEE--ECCSS-CCBEEEESSCSSTTCSEEEEEECC------CE
T ss_pred             CCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEE--ECCCC-cceEEECCCCCCcccceEEEecccCCCCCCCC
Confidence               33444444431                     01222  24444 357899986     33 344332212    12


Q ss_pred             EEEEccCCc----eeeEEeecccc-CceEEEEEecC-------CCEEEEEeCCCcEEEEEcccce---EEEEE--E----
Q psy17610        234 RIWKLTRES----QSLQCVLKEHT-SSVSVIQIKSD-------SKEAMSASTDGTCVLWDLIKST---RLIIM--I----  292 (515)
Q Consensus       234 ~iw~~~~~~----~~~~~~~~~~~-~~v~~~~~~~~-------~~~l~~~~~d~~i~iwd~~~~~---~~~~~--~----  292 (515)
                      .|..+....    ..++..+..|. ..+..+.|-..       +. ++.+...+.|....+....   ....+  .    
T Consensus       251 ei~~i~~G~~yG~~~P~~~~~~~~g~Ap~G~~~Y~G~~fP~~~g~-~f~~~~~g~i~~~~~~~~~~~~~~~~~~~g~~~~  329 (463)
T 2wg3_C          251 RILQIIKGKDYESEPSLLEFKPFSNGPLVGGFVYRGCQSERLYGS-YVFGDRNGNFLTLQQSPVTKQWQEKPLCLGTSGS  329 (463)
T ss_dssp             EEEEEC----CCSCCCCEECCC----CEEEEEECCCSSCTTTTTC-EEEEETTSCEEEEEC-----CCEEEEECEEETTS
T ss_pred             eEeeeccCCCCCCCCCeEEeeCCCCccccceEEEeCCCChhhcce-EEEecCCCcEEEEEeCCCCceeeEEEeecCCccc
Confidence            333332111    12233333221 46677777432       23 4445555666655554321   11111  1    


Q ss_pred             ----cCccEEEEEEcCCCcEEEEEE
Q psy17610        293 ----LPSMIMSAAYHPSEVQLITCS  313 (515)
Q Consensus       293 ----~~~~~~~~~~~~~~~~l~~~~  313 (515)
                          ....+..+...|+|.++++..
T Consensus       330 ~~~~~~~r~~~v~~~pdG~Lyv~~~  354 (463)
T 2wg3_C          330 CRGYFSGHILGFGEDELGEVYILSS  354 (463)
T ss_dssp             SCSCCCSEEEEEEECTTCCEEEEEE
T ss_pred             ccccccCcceEEEECCCCCEEEEec
Confidence                124688888899988777765

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=94.70  E-value=2.7  Score=39.03  Aligned_cols=108  Identities=15%  Similarity=0.162  Sum_probs=61.6

Q ss_pred             EEEEEEEeeCCC-EEEEEeCCCeEEEEecCCCc---eEEEecC--------CCCCCeEEEEEcCC----CCEEEEecC--
Q psy17610        168 ICACIVFTYDGK-AILSGWNDGFIRCFTPQSGK---LKFIIPN--------AHNRGVTALAITQD----GTRLLSGGG--  229 (515)
Q Consensus       168 ~v~~~~~~~~~~-~l~~~~~dg~i~~~~~~~~~---~~~~~~~--------~~~~~v~~~~~~~~----~~~l~~~~~--  229 (515)
                      ....|+|.|+|. .|+++...|.|++++.....   .+..+..        ........|+++|+    +.+.++-+.  
T Consensus        15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~   94 (463)
T 2wg3_C           15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ   94 (463)
T ss_dssp             SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred             CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence            346899999996 56677789999999754321   2222211        11456889999996    433333221  


Q ss_pred             C----------CcEEEEEccCC--------ceeeEEeec--cccCceEEEEEecCCCEEEEEeCCC
Q psy17610        230 E----------GQVRIWKLTRE--------SQSLQCVLK--EHTSSVSVIQIKSDSKEAMSASTDG  275 (515)
Q Consensus       230 d----------~~i~iw~~~~~--------~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~  275 (515)
                      +          ..|.-|.+...        ..+.+..+.  ........|.|.|||.+.++.+..+
T Consensus        95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~  160 (463)
T 2wg3_C           95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM  160 (463)
T ss_dssp             CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred             CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence            1          13444555321        112222222  1122357899999998877766543

>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1

Probab=93.61  E-value=3.4  Score=36.02  Aligned_cols=197  Identities=10%  Similarity=0.026  Sum_probs=109.9

Q ss_pred             cCCCEEEEEeCCCcEEEEEcccceEE-------E--EEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEE---
Q psy17610        263 SDSKEAMSASTDGTCVLWDLIKSTRL-------I--IMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIR---  330 (515)
Q Consensus       263 ~~~~~l~~~~~d~~i~iwd~~~~~~~-------~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~---  330 (515)
                      ++...+++.+.+|.|+--.+...+..       .  .+.....+..+........++..+..|.++-+....-....   
T Consensus         6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~   85 (312)
T 1suu_A            6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRAS   85 (312)
T ss_dssp             --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-----
T ss_pred             CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccC
Confidence            45667888899999988876543221       1  11223345555555566677888888887776543211110   


Q ss_pred             -------EEecCCCccEEEEEEcC---CCCEEEEEcCCCeEEEEEccC-------CeeeeeccCCCCCeeEEEECCCCcE
Q psy17610        331 -------SLEGSDVAAVNCVDFVD---DGKYFLTGGADQIVKMWMYRE-------GVPCFVGIGHAASITKIKISPDKKV  393 (515)
Q Consensus       331 -------~~~~~~~~~i~~~~~~~---~~~~l~~~~~dg~i~i~d~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~  393 (515)
                             .+.......+..+...+   +..+++..+..|.++...+..       |.....+.. .+.+..+....+...
T Consensus        86 ~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~~  164 (312)
T 1suu_A           86 KGQNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDEK  164 (312)
T ss_dssp             --CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTCE
T ss_pred             CCcChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCCE
Confidence                   01111123444443322   456788889999999887743       223333433 455555555455567


Q ss_pred             EEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCC
Q psy17610        394 IVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCD  472 (515)
Q Consensus       394 l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~  472 (515)
                      ++..+.+|....+............            .............+..+..-+++..+++.+..|..+..++..
T Consensus       165 i~l~T~~G~~~r~~~~ev~~~gR~~------------~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e  231 (312)
T 1suu_A          165 VICLSKKGSAFIFNSRDVRLTNRGT------------QGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSK  231 (312)
T ss_dssp             EEEEETTSEEEEEEGGGSCBCCTTB------------CCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred             EEEEeCCCcEEEEEHHHccccCCCC------------CCeEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence            8888899999888775432110000            011111111233455555545566788889999998888753

>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}

Probab=92.77  E-value=5.5  Score=36.09  Aligned_cols=213  Identities=8%  Similarity=-0.087  Sum_probs=99.1

Q ss_pred             CEEEEEeCCCeEEEEecCC-CceEEEe-cCCCCCCeEEEEEcC--CCCEEEEecCCC----cEEEEEccCCceeeEEe--
Q psy17610        179 KAILSGWNDGFIRCFTPQS-GKLKFII-PNAHNRGVTALAITQ--DGTRLLSGGGEG----QVRIWKLTRESQSLQCV--  248 (515)
Q Consensus       179 ~~l~~~~~dg~i~~~~~~~-~~~~~~~-~~~~~~~v~~~~~~~--~~~~l~~~~~d~----~i~iw~~~~~~~~~~~~--  248 (515)
                      ..|.+++..| +.+++... ++.-... .......|.+|++.|  .+. +.+++..|    .|...+-...+......  
T Consensus        23 g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~-l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~  100 (394)
T 3b7f_A           23 VMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPER-MLMAARTGHLGPTVFRSDDGGGNWTEATRPP  100 (394)
T ss_dssp             CEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTC-EEEEEEC--CCEEEEEESSTTSCCEECSBCC
T ss_pred             CEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCe-EEEEecCCCCCccEEEeCCCCCCceECCccc
Confidence            3677777777 55554432 2222111 112345699999998  444 44444444    34333211111221111  


Q ss_pred             -ecc--------ccCceEEEEEecC--CCEEEEEeCCCcEEEEEcccceEEEEEE--------------------cCccE
Q psy17610        249 -LKE--------HTSSVSVIQIKSD--SKEAMSASTDGTCVLWDLIKSTRLIIMI--------------------LPSMI  297 (515)
Q Consensus       249 -~~~--------~~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~--------------------~~~~~  297 (515)
                       +..        ....|..+++.|.  ...++.+...+.|...+-. ++.-..+.                    ....+
T Consensus       101 ~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~Dg-G~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i  179 (394)
T 3b7f_A          101 AFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTDH-GASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKM  179 (394)
T ss_dssp             CCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESST-TSBCEECHHHHTCTTHHHHHCCC----CCCCEE
T ss_pred             cCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcCC-CCCeEECcCccCCccccccccccccCCCCCCce
Confidence             111        1124777888862  4566666655555544321 11111111                    11247


Q ss_pred             EEEEEcCC-CcEEEEEECCCeEEEEeCCCCceEEEEecC-C-----------CccEEEEEEcCC-CCEEEEEcCCCeEEE
Q psy17610        298 MSAAYHPS-EVQLITCSTNKMIDYWETCDGSIIRSLEGS-D-----------VAAVNCVDFVDD-GKYFLTGGADQIVKM  363 (515)
Q Consensus       298 ~~~~~~~~-~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~-~-----------~~~i~~~~~~~~-~~~l~~~~~dg~i~i  363 (515)
                      ..+.++|. ...++++...+.+...+- .++.-..+... .           ...+.++.+.|+ ...+.++...+ |..
T Consensus       180 ~~i~~d~~~~~~l~vg~~~ggl~~s~D-gG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~  257 (394)
T 3b7f_A          180 HSILVDPRDPKHLYIGMSSGGVFESTD-AGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYR  257 (394)
T ss_dssp             EEEEECTTCTTCEEEEEETBEEEEESS-TTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEE
T ss_pred             eEEEECCCCCCEEEEEECCCCEEEECC-CCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEE
Confidence            78889884 445555555554544332 22222222110 0           124788999985 35666666544 443


Q ss_pred             EEccCCeeeeeccC--CC---CCeeEEEECC-CCcEEEEE
Q psy17610        364 WMYREGVPCFVGIG--HA---ASITKIKISP-DKKVIVSV  397 (515)
Q Consensus       364 ~d~~~~~~~~~~~~--~~---~~i~~~~~~~-~~~~l~~~  397 (515)
                      .+- .++....+..  ..   ..+..++++| +...|..+
T Consensus       258 s~D-~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~  296 (394)
T 3b7f_A          258 MDR-REGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVF  296 (394)
T ss_dssp             EET-TTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEE
T ss_pred             eCC-CCCcceECCCCCCCCCccceEEEEECCCCCCEEEEE
Confidence            332 2332222211  11   3456788886 33344444

>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}

Probab=92.40  E-value=9.2  Score=37.80  Aligned_cols=236  Identities=9%  Similarity=0.014  Sum_probs=121.1

Q ss_pred             eEEEE-eCCCCcEEEEEec-C----CcEEEEeCCCCceeEE-EE-ecCe------EEEEEEEeeCCCEEEEEe-------
Q psy17610        127 IYDLQ-FPVNFSSVFATCS-K----NDIRIWSVRTLNELLR-IS-VMNM------ICACIVFTYDGKAILSGW-------  185 (515)
Q Consensus       127 v~~~~-~~~~~~~l~~~~~-d----~~i~iw~~~~~~~~~~-~~-~~~~------~v~~~~~~~~~~~l~~~~-------  185 (515)
                      ...+. ++|++++++.+-+ .    ..++++|+.+++.+.. +. ..+.      ....++|..+ +.++.+.       
T Consensus       131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~-~~~~~~~~~~~~~~  209 (711)
T 4hvt_A          131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINK-DTIIFNLVLHKNEI  209 (711)
T ss_dssp             EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEET-TEEEECCCCSTTCB
T ss_pred             EeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECC-CEEEEEeCCCCCCc
Confidence            44555 8999988777655 2    2599999999876531 11 0000      1134478744 4444432       


Q ss_pred             ----CCCeEEEEecCCCc--eEEEecCCCCCCeEEEEEcCCCC-----EEEEecC---CCcEEEEEccCCceeeEEeecc
Q psy17610        186 ----NDGFIRCFTPQSGK--LKFIIPNAHNRGVTALAITQDGT-----RLLSGGG---EGQVRIWKLTRESQSLQCVLKE  251 (515)
Q Consensus       186 ----~dg~i~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~-----~l~~~~~---d~~i~iw~~~~~~~~~~~~~~~  251 (515)
                          ....++.|.+-+..  -...+.......-.....+++++     .+++.+.   ...+.+.+.......... +..
T Consensus       210 ~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-l~~  288 (711)
T 4hvt_A          210 TSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQK-INM  288 (711)
T ss_dssp             CTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEE-CCS
T ss_pred             CcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceE-eec
Confidence                12468888776542  12222122222233455566665     2444332   234555565432233222 211


Q ss_pred             ccCceEEEEEecCCCEEEEE----------eCCCcEEEEEcccce-------EEEE-EEc--CccEEEEEEcCCCcEEEE
Q psy17610        252 HTSSVSVIQIKSDSKEAMSA----------STDGTCVLWDLIKST-------RLII-MIL--PSMIMSAAYHPSEVQLIT  311 (515)
Q Consensus       252 ~~~~v~~~~~~~~~~~l~~~----------~~d~~i~iwd~~~~~-------~~~~-~~~--~~~~~~~~~~~~~~~l~~  311 (515)
                      ....  .+....++.+++..          ...+.|...++.++.       .... +..  ...+..+.+..+ ..+++
T Consensus       289 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~  365 (711)
T 4hvt_A          289 PSDA--TLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLA  365 (711)
T ss_dssp             CTTC--EEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEE
T ss_pred             CCcc--eEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEE
Confidence            1111  12234455554432          246778999987642       1222 222  235777888765 45566


Q ss_pred             EECCC--eEEEEeCCCCc-eEEE-EecCCCccEEEEEEcCCCCEE-EEEc---CCCeEEEEEcc
Q psy17610        312 CSTNK--MIDYWETCDGS-IIRS-LEGSDVAAVNCVDFVDDGKYF-LTGG---ADQIVKMWMYR  367 (515)
Q Consensus       312 ~~~~~--~i~~~d~~~~~-~~~~-~~~~~~~~i~~~~~~~~~~~l-~~~~---~dg~i~i~d~~  367 (515)
                      ...++  .+.++++.+++ .... +..+..+.+.....++++..+ ++.+   .-+.+..+|+.
T Consensus       366 ~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~  429 (711)
T 4hvt_A          366 TYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT  429 (711)
T ss_dssp             EEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred             EEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence            66665  46777776664 2333 433322456666676766544 3333   23578888876

>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}

Probab=92.09  E-value=10  Score=37.54  Aligned_cols=233  Identities=11%  Similarity=0.051  Sum_probs=121.8

Q ss_pred             EeeCCCEEEEEeC-----CCeEEEEecCCCceEEEecCCCC-C------CeEEEEEcCCCCEEEEec-----------CC
Q psy17610        174 FTYDGKAILSGWN-----DGFIRCFTPQSGKLKFIIPNAHN-R------GVTALAITQDGTRLLSGG-----------GE  230 (515)
Q Consensus       174 ~~~~~~~l~~~~~-----dg~i~~~~~~~~~~~~~~~~~~~-~------~v~~~~~~~~~~~l~~~~-----------~d  230 (515)
                      ++|++++++.+-.     -..++++|+.+++.+..-..+.. .      ....++|..+. .++.+.           ..
T Consensus       137 ~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~-~~~~~~~~~~~~~~~~~~~  215 (711)
T 4hvt_A          137 CFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKD-TIIFNLVLHKNEITSSLYP  215 (711)
T ss_dssp             CSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETT-EEEECCCCSTTCBCTTSSB
T ss_pred             cCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCC-EEEEEeCCCCCCcCcCCCC
Confidence            7888887775432     23799999999987632111000 0      11344776433 344332           22


Q ss_pred             CcEEEEEccCCceeeEEeeccccCce-EEEEEecCCCE-----EEEEeCC---CcEEEEEcccc-eEEEEEEcCccEEEE
Q psy17610        231 GQVRIWKLTRESQSLQCVLKEHTSSV-SVIQIKSDSKE-----AMSASTD---GTCVLWDLIKS-TRLIIMILPSMIMSA  300 (515)
Q Consensus       231 ~~i~iw~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~-----l~~~~~d---~~i~iwd~~~~-~~~~~~~~~~~~~~~  300 (515)
                      ..|+.|.+-+....-...+.+....+ .....++++++     +++.+.+   ..+.+.+.... .....+..+.... +
T Consensus       216 ~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~  294 (711)
T 4hvt_A          216 NSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMPSDAT-L  294 (711)
T ss_dssp             CEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSCTTCE-E
T ss_pred             CEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecCCcce-E
Confidence            46888888544333344444433333 23444566652     4443322   34555565431 1223333333322 2


Q ss_pred             EEcCCCcEEEEE----------ECCCeEEEEeCCCCc-------eEEE-EecCCCccEEEEEEcCCCCEEEEEcCCCe--
Q psy17610        301 AYHPSEVQLITC----------STNKMIDYWETCDGS-------IIRS-LEGSDVAAVNCVDFVDDGKYFLTGGADQI--  360 (515)
Q Consensus       301 ~~~~~~~~l~~~----------~~~~~i~~~d~~~~~-------~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~dg~--  360 (515)
                      ..+.++..++..          ...+.|...++.++.       .... +.......+..+.+..+ .++++...++.  
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~~~~~~~~~  373 (711)
T 4hvt_A          295 QGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLATYDNVVAK  373 (711)
T ss_dssp             EEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEEEEETTEEE
T ss_pred             eeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEEEEECCEEE
Confidence            234455554422          246778888887642       2233 33333467788888876 56777777764  


Q ss_pred             EEEEEccCCe-eeee-cc-CCCCCeeEEEECCCCc-EEEEEeC---CCcEEEEeCC
Q psy17610        361 VKMWMYREGV-PCFV-GI-GHAASITKIKISPDKK-VIVSVSA---DGGIFLWTFP  409 (515)
Q Consensus       361 i~i~d~~~~~-~~~~-~~-~~~~~i~~~~~~~~~~-~l~~~~~---dg~i~iw~~~  409 (515)
                      +.++++.++. .... +. ...+.+.....++++. ++++.+.   -+.+..+|+.
T Consensus       374 l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~  429 (711)
T 4hvt_A          374 VVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT  429 (711)
T ss_dssp             EEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred             EEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence            6677776664 2222 21 1134566667777665 4444433   3567777765

>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}

Probab=91.84  E-value=7.2  Score=35.31  Aligned_cols=288  Identities=9%  Similarity=-0.028  Sum_probs=132.7

Q ss_pred             CCEEEEEecCceEEEEECCC-CceeEEe-eccCccCeEEEEeCC-CCcEEEEEecCC----cEEEEeCCCCceeEEEEe-
Q psy17610         93 NNKVFVGTVNCEIFLIDMNS-GFTLTLV-NTCHTSAIYDLQFPV-NFSSVFATCSKN----DIRIWSVRTLNELLRISV-  164 (515)
Q Consensus        93 ~~~l~~~~~d~~i~iw~~~~-~~~~~~~-~~~h~~~v~~~~~~~-~~~~l~~~~~d~----~i~iw~~~~~~~~~~~~~-  164 (515)
                      ...|.+|+..| +.+++... +...... .......|.+|++.| +...+.+++..+    .|... .+.++.-..+.. 
T Consensus        22 ~g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s-~D~G~tW~~~~~~   99 (394)
T 3b7f_A           22 PVMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRS-DDGGGNWTEATRP   99 (394)
T ss_dssp             CCEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEE-SSTTSCCEECSBC
T ss_pred             CCEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEe-CCCCCCceECCcc
Confidence            34677888777 55555432 2222221 111235699999998 234555555544    33332 222322222110 


Q ss_pred             -------------cCeEEEEEEEeeC--CCEEEEEeCCCeEEEEecCCCceEEEecC------------------CCCCC
Q psy17610        165 -------------MNMICACIVFTYD--GKAILSGWNDGFIRCFTPQSGKLKFIIPN------------------AHNRG  211 (515)
Q Consensus       165 -------------~~~~v~~~~~~~~--~~~l~~~~~dg~i~~~~~~~~~~~~~~~~------------------~~~~~  211 (515)
                                   ....|.++++.|.  ...+.++...+.|...+- .++.-..+..                  .....
T Consensus       100 ~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~D-gG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~  178 (394)
T 3b7f_A          100 PAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTD-HGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPK  178 (394)
T ss_dssp             CCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESS-TTSBCEECHHHHTCTTHHHHHCCC----CCCCE
T ss_pred             ccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcC-CCCCeEECcCccCCccccccccccccCCCCCCc
Confidence                         1125778888872  455666666665555432 2322222210                  12235


Q ss_pred             eEEEEEcC-CCCEEEEecCCCcEEEEEccCCceeeEEeecc----c--------cCceEEEEEecC-CCEEEEEeCCCcE
Q psy17610        212 VTALAITQ-DGTRLLSGGGEGQVRIWKLTRESQSLQCVLKE----H--------TSSVSVIQIKSD-SKEAMSASTDGTC  277 (515)
Q Consensus       212 v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~----~--------~~~v~~~~~~~~-~~~l~~~~~d~~i  277 (515)
                      +.+|.++| +...+..+..++.|...+-  ...........    +        ...+..+.+.|+ ...++.+...+ |
T Consensus       179 i~~i~~d~~~~~~l~vg~~~ggl~~s~D--gG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l  255 (394)
T 3b7f_A          179 MHSILVDPRDPKHLYIGMSSGGVFESTD--AGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-I  255 (394)
T ss_dssp             EEEEEECTTCTTCEEEEEETBEEEEESS--TTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-E
T ss_pred             eeEEEECCCCCCEEEEEECCCCEEEECC--CCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-E
Confidence            78999987 3344555544444433322  22222111110    0        124788888885 35666666544 4


Q ss_pred             EEEEcccceEEEEEE--cC----ccEEEEEEcCC-CcEEEEEEC-----------CCeEEEEeCCC-CceEEEEec--CC
Q psy17610        278 VLWDLIKSTRLIIMI--LP----SMIMSAAYHPS-EVQLITCST-----------NKMIDYWETCD-GSIIRSLEG--SD  336 (515)
Q Consensus       278 ~iwd~~~~~~~~~~~--~~----~~~~~~~~~~~-~~~l~~~~~-----------~~~i~~~d~~~-~~~~~~~~~--~~  336 (515)
                      ...+- .++.-..+.  .+    ..+..++++|. ...+.++..           ++...+|.... ++.-..+..  +.
T Consensus       256 ~~s~D-~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp~  334 (394)
T 3b7f_A          256 YRMDR-REGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPT  334 (394)
T ss_dssp             EEEET-TTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSCC
T ss_pred             EEeCC-CCCcceECCCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCCC
Confidence            43331 122222211  12    23466777763 344444432           22234454443 333333321  11


Q ss_pred             Cc-----cEEEEEEcCC-CCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEEC
Q psy17610        337 VA-----AVNCVDFVDD-GKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKIS  388 (515)
Q Consensus       337 ~~-----~i~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~  388 (515)
                      ..     ....++++|. ...|++++.++.|..- ...++.-..+..+-..+.+++|.
T Consensus       335 ~~~~~~~~~~~~~~~p~~~~~l~~g~~~g~l~~S-~D~G~tW~~~~~~lp~~~~v~~~  391 (394)
T 3b7f_A          335 DQAWLTVKRQAMTADAHAPVGVYFGTTGGEIWAS-ADEGEHWQCIASHLPHIYAVQSA  391 (394)
T ss_dssp             SSCCCCCCTBSEEECCSSSCCEEEECTTSCEEEE-SSTTSBCEEEECSCSCEEEEEEE
T ss_pred             ccccceEEEEEEEECCCCCCEEEEEeCCCeEEEE-CCCCCCceEcccCCCCeeEEEEe
Confidence            00     0135778774 3446666655555432 22333333333344456676663

>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B

Probab=91.52  E-value=6  Score=33.82  Aligned_cols=245  Identities=14%  Similarity=0.070  Sum_probs=120.9

Q ss_pred             CCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEE
Q psy17610        209 NRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRL  288 (515)
Q Consensus       209 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~  288 (515)
                      ...|..++..... .++. . ||.+..|-.......-.  .......|..++....  +.+... ||.|..|-....-.+
T Consensus        23 ~~~i~~ia~G~~h-~~~l-~-~G~v~~wG~n~~Gqlg~--p~~~~~~i~~ia~G~~--hs~~l~-~G~v~~wG~n~~Gql   94 (282)
T 3qhy_B           23 QSGVDAIAGGYFH-GLAL-K-GGKVLGWGANLNGQLTM--PAATQSGVDAIAAGNY--HSLALK-DGEVIAWGGNEDGQT   94 (282)
T ss_dssp             SSSCCEEEECSSE-EEEE-E-TTEEEEEECCSSSTTSC--CGGGGSCCCEEEECSS--EEEEEE-TTEEEEEECCTTSTT
T ss_pred             cCCCcEEEeCCCe-EEEE-E-CCEEEEEeCCCCCCCCC--CccCCCCEEEEEeCCC--EEEEEE-CCEEEEeeCCCCCCC
Confidence            3467777765432 2333 4 89999997643221111  1112335666665433  222234 899999875432111


Q ss_pred             E-EEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEcc
Q psy17610        289 I-IMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYR  367 (515)
Q Consensus       289 ~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~  367 (515)
                      - .......+..++....  +.++-. +|.++.|-....-.+. ........+..++...+-  .+.-. ||.++.|-..
T Consensus        95 g~P~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg-~~~~~~~~i~~i~~G~~~--~~~l~-~G~v~~wG~n  167 (282)
T 3qhy_B           95 TVPAEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTT-VPAEAQSGVTALDGGVYT--ALAVK-NGGVIAWGDN  167 (282)
T ss_dssp             CCCGGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTS-CCGGGGSSEEEEEECSSE--EEEEE-TTEEEEEECC
T ss_pred             CCCcccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCC-CCccCCCCeEEEEcccCE--EEEEE-CCEEEEecCC
Confidence            0 0011234555554433  333344 8889988654422111 111112456666554432  22233 6889888765


Q ss_pred             CCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEe
Q psy17610        368 EGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSA  447 (515)
Q Consensus       368 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  447 (515)
                      ....+.....-...|..++...+.. ++.  .||.+..|-............                    ....|..+
T Consensus       168 ~~gqlg~p~~~~~~v~~i~~G~~hs-~al--~~G~v~~wG~n~~gqlg~p~~--------------------~~~~v~~i  224 (282)
T 3qhy_B          168 YFGQTTVPAEAQSGVDDVAGGIFHS-LAL--KDGKVIAWGDNRYKQTTVPTE--------------------ALSGVSAI  224 (282)
T ss_dssp             TTSTTSCCGGGGSSEEEEEECSSEE-EEE--ETTEEEEEECCTTSTTCCCGG--------------------GGSSCCEE
T ss_pred             CCCCCCCceecCCCeEEEEecCCEE-EEE--ECCeEEEEECCCCCCCCCCcc--------------------cCCCceEE
Confidence            4322221112235678887765543 333  599999997554322110000                    01225555


Q ss_pred             eeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEE
Q psy17610        448 AYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYF  499 (515)
Q Consensus       448 ~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l  499 (515)
                      +..... .++. . ||.|+.|-.....++..     ...|.+++-.+.-...
T Consensus       225 ~~G~~h-~~al-~-~g~v~~wG~n~~gq~~v-----~~~v~~iaaG~~h~~a  268 (282)
T 3qhy_B          225 ASGEWY-SLAL-K-NGKVIAWGSSRTAPSSV-----QSGVSSIEAGPNAAYA  268 (282)
T ss_dssp             EECSSC-EEEE-E-TTEEEEESTTCCCCGGG-----SSCEEEEEECSSCEEE
T ss_pred             EcCCCE-EEEE-E-CCEEEEecCCCCccccC-----CCCcEEEEECcCeEEE
Confidence            554333 2333 3 99999997655433222     1456666665544433

>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B

Probab=90.72  E-value=7.3  Score=33.32  Aligned_cols=217  Identities=12%  Similarity=0.029  Sum_probs=105.6

Q ss_pred             ceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEE-EEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEe
Q psy17610        255 SVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLII-MILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLE  333 (515)
Q Consensus       255 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~  333 (515)
                      .|..++....  +.+... ||.+..|-....-.+-. ......+..++.......+ . . +|.++.|-....-.+.. +
T Consensus        25 ~i~~ia~G~~--h~~~l~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~hs~~-l-~-~G~v~~wG~n~~Gqlg~-P   97 (282)
T 3qhy_B           25 GVDAIAGGYF--HGLALK-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYHSLA-L-K-DGEVIAWGGNEDGQTTV-P   97 (282)
T ss_dssp             SCCEEEECSS--EEEEEE-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSEEEE-E-E-TTEEEEEECCTTSTTCC-C
T ss_pred             CCcEEEeCCC--eEEEEE-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCEEEE-E-E-CCEEEEeeCCCCCCCCC-C
Confidence            5666665432  333334 88888886543211100 0112245555544332222 2 4 88888887544221110 1


Q ss_pred             cCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcC
Q psy17610        334 GSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELED  413 (515)
Q Consensus       334 ~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~  413 (515)
                      ..-...|..++...+  ..++-. +|.|+.|-....-.+.........|..++...+...+  -. ||.+..|-......
T Consensus        98 ~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~~~--l~-~G~v~~wG~n~~gq  171 (282)
T 3qhy_B           98 AEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTALA--VK-NGGVIAWGDNYFGQ  171 (282)
T ss_dssp             GGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEE--EE-TTEEEEEECCTTST
T ss_pred             cccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEEEE--EE-CCEEEEecCCCCCC
Confidence            111135666666543  333344 8999999765432222222234567777775544333  33 79999997654322


Q ss_pred             ccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEc
Q psy17610        414 DVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFV  493 (515)
Q Consensus       414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s  493 (515)
                      ... +.                   .....|..++...+. .++.  .+|.|+.|-....-.+..-. .....|..++-.
T Consensus       172 lg~-p~-------------------~~~~~v~~i~~G~~h-s~al--~~G~v~~wG~n~~gqlg~p~-~~~~~v~~i~~G  227 (282)
T 3qhy_B          172 TTV-PA-------------------EAQSGVDDVAGGIFH-SLAL--KDGKVIAWGDNRYKQTTVPT-EALSGVSAIASG  227 (282)
T ss_dssp             TSC-CG-------------------GGGSSEEEEEECSSE-EEEE--ETTEEEEEECCTTSTTCCCG-GGGSSCCEEEEC
T ss_pred             CCC-ce-------------------ecCCCeEEEEecCCE-EEEE--ECCeEEEEECCCCCCCCCCc-ccCCCceEEEcC
Confidence            110 00                   001336666554433 3333  59999999765422211111 111456666654


Q ss_pred             CCCcEEEEeecCCeEEEE
Q psy17610        494 DDGKYFLTGGADQIVKIC  511 (515)
Q Consensus       494 ~~~~~l~s~~~dg~v~iw  511 (515)
                      ......++   ||.|..|
T Consensus       228 ~~h~~al~---~g~v~~w  242 (282)
T 3qhy_B          228 EWYSLALK---NGKVIAW  242 (282)
T ss_dssp             SSCEEEEE---TTEEEEE
T ss_pred             CCEEEEEE---CCEEEEe
Confidence            44333222   7777766

>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}

Probab=90.68  E-value=8.2  Score=33.82  Aligned_cols=231  Identities=12%  Similarity=0.058  Sum_probs=127.2

Q ss_pred             CEEEEEeCCCeEEEEecCC-------CceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEc---cCC----cee
Q psy17610        179 KAILSGWNDGFIRCFTPQS-------GKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKL---TRE----SQS  244 (515)
Q Consensus       179 ~~l~~~~~dg~i~~~~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~---~~~----~~~  244 (515)
                      ..+++.+.+|.|+--.+.+       ++-...........+..+........|+.-+..|.++-...   ...    .+.
T Consensus         4 ~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~ke~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~   83 (327)
T 3uc1_A            4 DVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQ   83 (327)
T ss_dssp             EEEEEEETTSEEEEEEHHHHHHHC--------CCCCGGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCE
T ss_pred             cEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccCCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCE
Confidence            4677788888888665332       11112221223444555555445556666666676665543   211    111


Q ss_pred             eEE---eeccccCceEEEEEec---CCCEEEEEeCCCcEEEEEcccceEE-------EEEEcCccEEEEEEcCCCcEEEE
Q psy17610        245 LQC---VLKEHTSSVSVIQIKS---DSKEAMSASTDGTCVLWDLIKSTRL-------IIMILPSMIMSAAYHPSEVQLIT  311 (515)
Q Consensus       245 ~~~---~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~iwd~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~  311 (515)
                      ++.   .+. ....|..+..-+   +..+++..+.+|.++.-.+......       ..+.....+..+........++.
T Consensus        84 ~i~~~l~l~-~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~ill  162 (327)
T 3uc1_A           84 HVANLLAFQ-PEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDDLLL  162 (327)
T ss_dssp             EHHHHTTCC-TTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTCEEEE
T ss_pred             EHHHccCCC-CCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEecCCCEEEE
Confidence            111   111 234455554433   4778999999999999887653221       12223345555555556678888


Q ss_pred             EECCCeEEEEeCC--CCce-------EEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCee-------e--e
Q psy17610        312 CSTNKMIDYWETC--DGSI-------IRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVP-------C--F  373 (515)
Q Consensus       312 ~~~~~~i~~~d~~--~~~~-------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-------~--~  373 (515)
                      .+..|.+..+...  .-..       ..-+.......|..+...+++..++..+..|.++.-.+..-..       +  .
T Consensus       163 ~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~  242 (327)
T 3uc1_A          163 VSANGQSIRFSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTV  242 (327)
T ss_dssp             EETTSEEEEEECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESS
T ss_pred             EECCCeEEEEECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEE
Confidence            8899998888766  2111       1112222235566666666667888999999998887643211       1  1


Q ss_pred             eccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCC
Q psy17610        374 VGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPE  410 (515)
Q Consensus       374 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~  410 (515)
                      .+..-.+.+-.+....+...++..+.+|.+.-++...
T Consensus       243 ~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~~  279 (327)
T 3uc1_A          243 MYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAARQ  279 (327)
T ss_dssp             CCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGGG
T ss_pred             EecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehhh
Confidence            2222133444444434445566677788877776543

>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}

Probab=90.53  E-value=8.1  Score=33.52  Aligned_cols=195  Identities=11%  Similarity=0.075  Sum_probs=105.0

Q ss_pred             CCCEEEEEeCCCcEEEEEcccceEEE---------EEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeC---CC------
Q psy17610        264 DSKEAMSASTDGTCVLWDLIKSTRLI---------IMILPSMIMSAAYHPSEVQLITCSTNKMIDYWET---CD------  325 (515)
Q Consensus       264 ~~~~l~~~~~d~~i~iwd~~~~~~~~---------~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~---~~------  325 (515)
                      +...+++.+.+|.|+--.+...+...         .+.....+..+........++..+..|.++-+..   +.      
T Consensus         2 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a~   81 (307)
T 1zi0_A            2 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGAR   81 (307)
T ss_dssp             CCEEEEEEETTSEEEEEECC--------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSSC
T ss_pred             CCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCCCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCCC
Confidence            45567888888888877665432211         1122334545555555667777778887666543   22      


Q ss_pred             CceEEE-EecCCCccEEEEEE-c--CCCCEEEEEcCCCeEEEEEccC-------CeeeeeccCCCCCeeEEEECCCCcEE
Q psy17610        326 GSIIRS-LEGSDVAAVNCVDF-V--DDGKYFLTGGADQIVKMWMYRE-------GVPCFVGIGHAASITKIKISPDKKVI  394 (515)
Q Consensus       326 ~~~~~~-~~~~~~~~i~~~~~-~--~~~~~l~~~~~dg~i~i~d~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~l  394 (515)
                      |.++.. +.......|..+.. .  +++.+++..+.+|.++-..+..       +.....+..+ +.+-.+....+...+
T Consensus        82 G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~~i  160 (307)
T 1zi0_A           82 GRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGEDEV  160 (307)
T ss_dssp             CEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTCEE
T ss_pred             CeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCCEE
Confidence            221110 11122244555433 2  3456788899999999987642       2222233334 455555444455567


Q ss_pred             EEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecC
Q psy17610        395 VSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETC  471 (515)
Q Consensus       395 ~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~  471 (515)
                      +..+.+|.+..++............            ............|..+...+++..+++.+..|.++-.++.
T Consensus       161 ~l~T~~G~~irf~~~~v~~~gr~a~------------Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~  225 (307)
T 1zi0_A          161 MLFSAEGKVVRFKESSVRAMGCNTT------------GVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVA  225 (307)
T ss_dssp             EEEETTSEEEEEEGGGSCBCCTTCC------------CEECCCCCTTCCEEEEECCCSSCEEEEEETTSEEEEECGG
T ss_pred             EEECCCCcEEEEEHHHcCccCCCCC------------CeEeEEeCCCCEEEEEEEecCCCEEEEEEcCCceEEEEHH
Confidence            7788899888887654321110000            0011111123445566555556678888999998888764

>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}

Probab=89.37  E-value=6.1  Score=37.83  Aligned_cols=62  Identities=10%  Similarity=0.147  Sum_probs=42.3

Q ss_pred             CcEEEEEEecCCCEEEEEec------------CceEEEEECCCCceeEEeecc-CccCeEEEEeCCCCcEEEEEec
Q psy17610         82 SGISSLQYNPVNNKVFVGTV------------NCEIFLIDMNSGFTLTLVNTC-HTSAIYDLQFPVNFSSVFATCS  144 (515)
Q Consensus        82 ~~v~~~~~s~~~~~l~~~~~------------d~~i~iw~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~~~~~  144 (515)
                      ...--|+|+|.|++++.-..            ++.+.+.+..+++ +..++.+ -...++.++|+||++.|++.-.
T Consensus       476 ~~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~-~~rf~~~P~gaE~TG~~fspDg~tlfvniQ  550 (592)
T 3zwu_A          476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGE-IRRFMVGPIGCEVTGISFSPDQKTLFVGIQ  550 (592)
T ss_dssp             CCEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCC-EEEEEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred             cCCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCe-EEEEEeCCCCccCcCeeECCCCCEEEEEEE
Confidence            34567899999985554321            1346677777754 4444444 4468999999999998887654

>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}

Probab=89.35  E-value=11  Score=33.12  Aligned_cols=232  Identities=8%  Similarity=-0.007  Sum_probs=122.0

Q ss_pred             CEEEEEeCCCcEEEEEcccce-------EEEE--EEcCccEEEEEEcCCCcEEEEEECCCeEEEEe---CCCC------c
Q psy17610        266 KEAMSASTDGTCVLWDLIKST-------RLII--MILPSMIMSAAYHPSEVQLITCSTNKMIDYWE---TCDG------S  327 (515)
Q Consensus       266 ~~l~~~~~d~~i~iwd~~~~~-------~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d---~~~~------~  327 (515)
                      ..+++.+.+|.|+--.+.+.+       -...  +.....+..+........++.-+..|.++...   ++..      .
T Consensus         4 ~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~ke~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~   83 (327)
T 3uc1_A            4 DVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQ   83 (327)
T ss_dssp             EEEEEEETTSEEEEEEHHHHHHHC--------CCCCGGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCE
T ss_pred             cEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccCCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCE
Confidence            456777788888766543211       1111  11223355555555566666677777766543   3322      2


Q ss_pred             eEEE-EecCCCccEEEE-EEcC--CCCEEEEEcCCCeEEEEEccCC-------eeeeeccCCCCCeeEEEECCCCcEEEE
Q psy17610        328 IIRS-LEGSDVAAVNCV-DFVD--DGKYFLTGGADQIVKMWMYREG-------VPCFVGIGHAASITKIKISPDKKVIVS  396 (515)
Q Consensus       328 ~~~~-~~~~~~~~i~~~-~~~~--~~~~l~~~~~dg~i~i~d~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~l~~  396 (515)
                      ++.. +.......|..+ .+.+  +..+++..+.+|.++-..+...       .....+.. .+.+..+........|+.
T Consensus        84 ~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill  162 (327)
T 3uc1_A           84 HVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLL  162 (327)
T ss_dssp             EHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEE
T ss_pred             EHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEE
Confidence            2111 111122445444 4432  5789999999999999887542       22223333 344555555455567888


Q ss_pred             EeCCCcEEEEeCC--CCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCe
Q psy17610        397 VSADGGIFLWTFP--ELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGS  474 (515)
Q Consensus       397 ~~~dg~i~iw~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~  474 (515)
                      .+..|.+..+...  ..........            ....+.......|.++...+++..++..+..|.++.-.+..-.
T Consensus       163 ~T~~G~~~rf~~~~~eip~~gr~a~------------Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~  230 (327)
T 3uc1_A          163 VSANGQSIRFSATDEALRPMGRATS------------GVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYP  230 (327)
T ss_dssp             EETTSEEEEEECCTTTSCCCCTTSB------------CEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSC
T ss_pred             EECCCeEEEEECcccccCcCCcCCC------------CeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHcc
Confidence            8899998888776  3221110000            0011111223446666666667789999999999887764322


Q ss_pred             -------eeeeec--ccccceEEEEEEcCCCcEEEEeecCCeEEEE
Q psy17610        475 -------IIRSLE--GSDVAAVNCVDFVDDGKYFLTGGADQIVKIC  511 (515)
Q Consensus       475 -------~~~~~~--~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw  511 (515)
                             -+..+.  ... +.+..+....+...++..+.+|.+.-+
T Consensus       231 ~~~R~~~G~~~~~l~~~~-d~lv~~~~~~~~~~i~l~T~~G~~ir~  275 (327)
T 3uc1_A          231 VQGRGGKGVLTVMYDRRR-GRLVGALIVDDDSELYAVTSGGGVIRT  275 (327)
T ss_dssp             BCCTTSCCEESSCCCTTT-CSEEEEEEECTTCEEEEEEGGGCEEEE
T ss_pred             ccCcCCCcEEEEEecCCC-CeEEEEEEeCCCccEEEEcCCCeEEEE
Confidence                   122222  212 344444444444455556666655443

>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}

Probab=89.10  E-value=11  Score=32.79  Aligned_cols=234  Identities=11%  Similarity=0.063  Sum_probs=123.6

Q ss_pred             eCCCEEEEEeCCCeEEEEecCCCceEE-------EecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccC---C----
Q psy17610        176 YDGKAILSGWNDGFIRCFTPQSGKLKF-------IIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTR---E----  241 (515)
Q Consensus       176 ~~~~~l~~~~~dg~i~~~~~~~~~~~~-------~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~---~----  241 (515)
                      |+...+++.+.+|.|+--.+..-+...       .+.......+..+........|+..+..|.+.-+....   .    
T Consensus         1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a   80 (307)
T 1zi0_A            1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGA   80 (307)
T ss_dssp             CCCEEEEEEETTSEEEEEECC--------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSS
T ss_pred             CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCCCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCC
Confidence            345678888999999877665422211       11011233444444444455667677778766665421   1    


Q ss_pred             ceeeEE---eeccccCceEEEEEe---cCCCEEEEEeCCCcEEEEEcccce-------EEEEEEcCccEEEEEEcCCCcE
Q psy17610        242 SQSLQC---VLKEHTSSVSVIQIK---SDSKEAMSASTDGTCVLWDLIKST-------RLIIMILPSMIMSAAYHPSEVQ  308 (515)
Q Consensus       242 ~~~~~~---~~~~~~~~v~~~~~~---~~~~~l~~~~~d~~i~iwd~~~~~-------~~~~~~~~~~~~~~~~~~~~~~  308 (515)
                      .+.+..   .+. ....|..+...   .++.+++..+..|.++-..+....       ....+.....+..+........
T Consensus        81 ~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~d~lv~~~~~~~~~~  159 (307)
T 1zi0_A           81 RGRPIVNLLPLE-QDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDE  159 (307)
T ss_dssp             CCEEGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTTCCEEEEEEECTTCE
T ss_pred             CCeEhhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCCCEEEEEEEeCCCCE
Confidence            111111   111 23345555432   345678999999999998775321       1111222345555555555667


Q ss_pred             EEEEECCCeEEEEeCCCCc-------eEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCC---------eee
Q psy17610        309 LITCSTNKMIDYWETCDGS-------IIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREG---------VPC  372 (515)
Q Consensus       309 l~~~~~~~~i~~~d~~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~---------~~~  372 (515)
                      ++..+.+|.+..++...-.       -+.-+.......+..+...+++..+++.+..|..+-.++..-         ...
T Consensus       160 i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~kG~~~  239 (307)
T 1zi0_A          160 VMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVIS  239 (307)
T ss_dssp             EEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEECCCSSCEEEEEETTSEEEEECGGGSCCCCTTSCCEES
T ss_pred             EEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEEEEEecCCCEEEEEEcCCceEEEEHHHhccCCCCCCCEEe
Confidence            8888888888777653211       112222223355666655555667888888999888876431         112


Q ss_pred             eeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCC
Q psy17610        373 FVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPE  410 (515)
Q Consensus       373 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~  410 (515)
                      ..+....+.+-.+....+...++..+.+|.+.-.++..
T Consensus       240 ~~~~~~~~~lv~~~~v~~~~~l~~~t~~g~~ir~~~~~  277 (307)
T 1zi0_A          240 IKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSE  277 (307)
T ss_dssp             SCCCTTTCSEEEEEEECTTCEEEEEESSCCEEEEEGGG
T ss_pred             eEecCCCCeEEEEEEeCCCceEEEEcCCCcEEEEeccc
Confidence            22222234454444433344455666777766665543

>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1

Probab=86.77  E-value=15  Score=32.02  Aligned_cols=197  Identities=11%  Similarity=0.064  Sum_probs=106.8

Q ss_pred             cCCCEEEEEeCCCcEEEEEcccceE----EEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeC---CC------CceE
Q psy17610        263 SDSKEAMSASTDGTCVLWDLIKSTR----LIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWET---CD------GSII  329 (515)
Q Consensus       263 ~~~~~l~~~~~d~~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~---~~------~~~~  329 (515)
                      |+...+++.+.+|.|+--.+...+.    ...+.....+..+........++..+..|.++-+..   +.      |.++
T Consensus         3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~i   82 (323)
T 1wp5_A            3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDTDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQHI   82 (323)
T ss_dssp             SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTTCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEEG
T ss_pred             cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCCCCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcCh
Confidence            4556788888888888776542211    111222334555555556667777778887666543   22      2211


Q ss_pred             EE-EecCCCccEEEE-EEcC--CCCEEEEEcCCCeEEEEEccC--------CeeeeeccCCCCCeeEEEECCCCcEEEEE
Q psy17610        330 RS-LEGSDVAAVNCV-DFVD--DGKYFLTGGADQIVKMWMYRE--------GVPCFVGIGHAASITKIKISPDKKVIVSV  397 (515)
Q Consensus       330 ~~-~~~~~~~~i~~~-~~~~--~~~~l~~~~~dg~i~i~d~~~--------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~  397 (515)
                      .. +.......|..+ ...+  ++.+++..+.+|.++-..+..        +.....+... +.+-.+........++..
T Consensus        83 ~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~-d~lv~~~~~~~~~~i~l~  161 (323)
T 1wp5_A           83 ANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKND-DQVVDVHLTDGMNELFLV  161 (323)
T ss_dssp             GGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTT-CCEEEEEEECSCSEEEEE
T ss_pred             hhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCC-CEEEEEEEeCCCCEEEEE
Confidence            11 111122345443 3432  256788899999999987742        2222223322 455555554455567788


Q ss_pred             eCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCc-EEEEeecCCeEEEEecCC
Q psy17610        398 SADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEV-QLITCSTNKMIDYWETCD  472 (515)
Q Consensus       398 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~v~iwd~~~  472 (515)
                      +.+|.+..++...........            .............|..+..-+++. .+++.+..|..+..++..
T Consensus       162 T~~G~~irf~~~ev~~~gR~a------------~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e  225 (323)
T 1wp5_A          162 THNGYALWFDESEVSIVGVRA------------AGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTE  225 (323)
T ss_dssp             ETTSEEEEEEGGGSCBCCSSC------------CCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred             eCCCcEEEEEHHHCcccCCCC------------cCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHH
Confidence            899998888765432110000            011111111223455554434444 788888899888777654

>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*

Probab=86.42  E-value=18  Score=32.41  Aligned_cols=174  Identities=9%  Similarity=0.022  Sum_probs=99.5

Q ss_pred             CeEEEEeCCCC--ceEEEEecCC-----CccEEEEEEc---CC----CCEEEEE-cCCCeEEEEEccCCeeeeecc----
Q psy17610        316 KMIDYWETCDG--SIIRSLEGSD-----VAAVNCVDFV---DD----GKYFLTG-GADQIVKMWMYREGVPCFVGI----  376 (515)
Q Consensus       316 ~~i~~~d~~~~--~~~~~~~~~~-----~~~i~~~~~~---~~----~~~l~~~-~~dg~i~i~d~~~~~~~~~~~----  376 (515)
                      -+|.+||+.+.  +.++++..+.     ...+..+.+.   |+    +.++... ...+-|.++|+.+++..+.+.    
T Consensus       123 pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~  202 (381)
T 3q6k_A          123 PAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFK  202 (381)
T ss_dssp             CEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGS
T ss_pred             ceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCc
Confidence            36888999999  8888887542     2457778877   22    3343333 346789999998876544331    


Q ss_pred             C----------C----CCCeeEEEECCC----CcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeee
Q psy17610        377 G----------H----AASITKIKISPD----KKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIM  438 (515)
Q Consensus       377 ~----------~----~~~i~~~~~~~~----~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  438 (515)
                      .          .    ...+..|+++|+    ++.|.-....+ -++|.+++.......   ..          ......
T Consensus       203 pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss-~~ly~V~T~~L~~~~---~~----------~~v~~~  268 (381)
T 3q6k_A          203 AERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSA-IKVYSVNTKELKQKG---GK----------LNPELL  268 (381)
T ss_dssp             CCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSC-SEEEEEEHHHHSSTT---CC----------CCCEEE
T ss_pred             cccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCC-CcEEEEEHHHhhCcc---hh----------hceEEe
Confidence            1          0    136778888887    67777665554 245554432110000   00          000111


Q ss_pred             cC---cccEEEeeec-cCCcEEEEeecCCeEEEEecCC-----CeeeeeecccccceEEEEEEcCCCcEEEEee
Q psy17610        439 IL---PSMIMSAAYH-PSEVQLITCSTNKMIDYWETCD-----GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGG  503 (515)
Q Consensus       439 ~~---~~~i~~~~~s-~~~~~l~~~~~dg~v~iwd~~~-----~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~  503 (515)
                      +.   .+.-..+++. .+|.++++--....|..|+..+     +............-+..+.+.++|.+.+..+
T Consensus       269 G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~sn  342 (381)
T 3q6k_A          269 GNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMSN  342 (381)
T ss_dssp             EECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEEC
T ss_pred             eecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEEC
Confidence            11   1223455665 5777777777888999999865     1111122222224567788888887655543

>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}

Probab=86.42  E-value=18  Score=32.56  Aligned_cols=246  Identities=13%  Similarity=0.155  Sum_probs=121.1

Q ss_pred             CeEEEEEcCCCCEEEEecCCCcEEEEEccCCc---------eeeEEeecc-ccCceEEEEEecCCCEEEEEeCCCcEEEE
Q psy17610        211 GVTALAITQDGTRLLSGGGEGQVRIWKLTRES---------QSLQCVLKE-HTSSVSVIQIKSDSKEAMSASTDGTCVLW  280 (515)
Q Consensus       211 ~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~---------~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~iw  280 (515)
                      .+..++..  ....+.-..||.|..|-.....         ......+.. ....+..++++....+.+....||.|..|
T Consensus        54 ~i~~i~~G--~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~w  131 (389)
T 3kci_A           54 RPVQLIGG--EQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW  131 (389)
T ss_dssp             CEEEEEEE--TTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEE
T ss_pred             ceEEEEeC--CCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEE
Confidence            34445433  3455556678889888653211         011111111 22334556666667777888889999999


Q ss_pred             Ecccc-----------eEEEEEEc-C-ccEEEEEEcCCCcEEEEEECCCeEEEEeCCCC---------c--eEEEEecCC
Q psy17610        281 DLIKS-----------TRLIIMIL-P-SMIMSAAYHPSEVQLITCSTNKMIDYWETCDG---------S--IIRSLEGSD  336 (515)
Q Consensus       281 d~~~~-----------~~~~~~~~-~-~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~---------~--~~~~~~~~~  336 (515)
                      -....           .....+.. . ..+..++.  ...+.++...+|.++.|-....         .  ....+....
T Consensus       132 G~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~--G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~  209 (389)
T 3kci_A          132 GEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA--GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQ  209 (389)
T ss_dssp             ECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEE--CSSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGT
T ss_pred             eCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEe--CcCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccC
Confidence            54321           11111111 1 13444443  3445566677888998864321         1  111122222


Q ss_pred             CccEEEEEEcCCCCEEEEEcCCCeEEEEEccCC------------eeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEE
Q psy17610        337 VAAVNCVDFVDDGKYFLTGGADQIVKMWMYREG------------VPCFVGIGHAASITKIKISPDKKVIVSVSADGGIF  404 (515)
Q Consensus       337 ~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~------------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~  404 (515)
                      ...+..++........++-..+|.|+.|-....            .+..........|..++....  +.+....+|.|.
T Consensus       210 ~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~~--hs~alt~~G~v~  287 (389)
T 3kci_A          210 GHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ--FSVALTKSGAVY  287 (389)
T ss_dssp             TSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEETT--EEEEEETTSCEE
T ss_pred             CCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCCCC--EEEEEeCCCeEE
Confidence            245666665443345666677899999965321            111111111224666665433  444556899999


Q ss_pred             EEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCC
Q psy17610        405 LWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCD  472 (515)
Q Consensus       405 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~  472 (515)
                      .|-................        ....+.......|..++..  ..+.++...+|.|+.|-...
T Consensus       288 ~wG~n~~GqLG~g~~~~~~--------~P~~v~~l~~~~v~~ia~G--~~h~~al~~~G~v~~wG~n~  345 (389)
T 3kci_A          288 TWGKGDYHRLGHGSDDHVR--------RPRQVQGLQGKKVIAIATG--SLHCVCCTEDGEVYTWGDND  345 (389)
T ss_dssp             EEECCGGGTTCSSSCCCEE--------EEEECGGGTTCCEEEEEEC--SSEEEEEETTCCEEEEECCT
T ss_pred             EEeCCCCCCCCCCCCcccc--------CCeEeccCCCCCEEEEEec--cCeEEEECCCCCEEEeeCCC
Confidence            9975432211110000000        0000001112235555443  33445557899999997643

>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}

Probab=86.38  E-value=18  Score=32.34  Aligned_cols=148  Identities=10%  Similarity=0.029  Sum_probs=87.7

Q ss_pred             ecCCCEEEEEeCCCcEEEEEcccc---------eEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEe---CCC----
Q psy17610        262 KSDSKEAMSASTDGTCVLWDLIKS---------TRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWE---TCD----  325 (515)
Q Consensus       262 ~~~~~~l~~~~~d~~i~iwd~~~~---------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d---~~~----  325 (515)
                      -|+...+++.+.+|.|+--.+...         .....+.....+..+........++..+..|.++.+.   ++.    
T Consensus         4 I~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r~   83 (370)
T 3l6v_A            4 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKEEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGSN   83 (370)
T ss_dssp             CCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSCCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTT
T ss_pred             ccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCCCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCcc
Confidence            367788999999999998765331         2222333344566666666667788788888877664   322    


Q ss_pred             --CceEEE-EecCCCccEEEEE-Ec--CCCCEEEEEcCCCeEEEEEccCC-------eeeeeccCCCCCeeEEEECCCCc
Q psy17610        326 --GSIIRS-LEGSDVAAVNCVD-FV--DDGKYFLTGGADQIVKMWMYREG-------VPCFVGIGHAASITKIKISPDKK  392 (515)
Q Consensus       326 --~~~~~~-~~~~~~~~i~~~~-~~--~~~~~l~~~~~dg~i~i~d~~~~-------~~~~~~~~~~~~i~~~~~~~~~~  392 (515)
                        |.++.. +.......|..+. +.  .++.+|+..+..|.++...+...       .....+.. ...+-.+.......
T Consensus        84 a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~~~~  162 (370)
T 3l6v_A           84 ARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTDGDR  162 (370)
T ss_dssp             SCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEECSCC
T ss_pred             cCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeCCCc
Confidence              222111 1112224454443 32  24568999999999998876432       22223333 34454454444555


Q ss_pred             EEEEEeCCCcEEEEeCCC
Q psy17610        393 VIVSVSADGGIFLWTFPE  410 (515)
Q Consensus       393 ~l~~~~~dg~i~iw~~~~  410 (515)
                      .++..+.+|.+..++...
T Consensus       163 ~i~l~T~~G~~irf~~~~  180 (370)
T 3l6v_A          163 DVLLFASNGKTVRFGEST  180 (370)
T ss_dssp             EEEEEETTSEEEEEEGGG
T ss_pred             eEEEEeCCCeEEEEEccc
Confidence            677788899888887654

>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1

Probab=85.97  E-value=17  Score=31.63  Aligned_cols=192  Identities=11%  Similarity=0.040  Sum_probs=110.5

Q ss_pred             eCCCEEEEEeCCCeEEEEecCCCc-------eEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCc------
Q psy17610        176 YDGKAILSGWNDGFIRCFTPQSGK-------LKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRES------  242 (515)
Q Consensus       176 ~~~~~l~~~~~dg~i~~~~~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~------  242 (515)
                      ++..++++.+.+|.|+--.+..-+       -...+.......+..+........++..+..|.++-+....-.      
T Consensus         6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~   85 (312)
T 1suu_A            6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRAS   85 (312)
T ss_dssp             --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-----
T ss_pred             CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccC
Confidence            566778899999999887654321       1211111233445555555555677777888887777653110      


Q ss_pred             -eee---EEeeccccCceEEEEEec---CCCEEEEEeCCCcEEEEEcccceE-------EEEEEcCccEEEEEEcCCCcE
Q psy17610        243 -QSL---QCVLKEHTSSVSVIQIKS---DSKEAMSASTDGTCVLWDLIKSTR-------LIIMILPSMIMSAAYHPSEVQ  308 (515)
Q Consensus       243 -~~~---~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~iwd~~~~~~-------~~~~~~~~~~~~~~~~~~~~~  308 (515)
                       +..   ...+. ....|..+...+   +..+++..+..|.++...+.....       ...+.....+..+.....+..
T Consensus        86 ~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~~~~~  164 (312)
T 1suu_A           86 KGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKDEK  164 (312)
T ss_dssp             --CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEECTTCE
T ss_pred             CCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeCCCCE
Confidence             000   00111 123454443333   467788999999999888754322       111222345555555555667


Q ss_pred             EEEEECCCeEEEEeCCCC-------ceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccC
Q psy17610        309 LITCSTNKMIDYWETCDG-------SIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYRE  368 (515)
Q Consensus       309 l~~~~~~~~i~~~d~~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~  368 (515)
                      ++..+.+|....+....-       +=+..+.......+..+..-+++..+++.+..|..+..++..
T Consensus       165 i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e  231 (312)
T 1suu_A          165 VICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSK  231 (312)
T ss_dssp             EEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred             EEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence            888889999888876431       112222222234555655555566788888899999888753

>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}

Probab=85.19  E-value=3.3  Score=39.65  Aligned_cols=59  Identities=17%  Similarity=0.196  Sum_probs=46.3

Q ss_pred             EEEeeeccCCcEEEEeecC------------CeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEe
Q psy17610        444 IMSAAYHPSEVQLITCSTN------------KMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTG  502 (515)
Q Consensus       444 i~~~~~s~~~~~l~~~~~d------------g~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~  502 (515)
                      .-.|+|+|.|++++.-+.+            ..+.+.+..++++.+-+.++....++.++|+||++.|+..
T Consensus       478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn  548 (592)
T 3zwu_A          478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG  548 (592)
T ss_dssp             EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred             CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence            5678999999976665432            2466777778888877877777899999999999988764

>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}

Probab=84.88  E-value=22  Score=32.06  Aligned_cols=235  Identities=11%  Similarity=0.037  Sum_probs=116.2

Q ss_pred             CCCEEEEEeCCCcEEEEEcccc--------e---EEEEEEc--CccEEEEEEcCCCcEEEEEECCCeEEEEeCCCC----
Q psy17610        264 DSKEAMSASTDGTCVLWDLIKS--------T---RLIIMIL--PSMIMSAAYHPSEVQLITCSTNKMIDYWETCDG----  326 (515)
Q Consensus       264 ~~~~l~~~~~d~~i~iwd~~~~--------~---~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~----  326 (515)
                      .....+....||.|..|-....        .   ....+..  ...+..++++....+.++-..+|.++.|-....    
T Consensus        61 G~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG  140 (389)
T 3kci_A           61 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG  140 (389)
T ss_dssp             ETTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTC
T ss_pred             CCCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCC
Confidence            3456666778899999854321        1   1111111  123555667777777778888999999954321    


Q ss_pred             -------ceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCC------------eeeeeccCCCCCeeEEEE
Q psy17610        327 -------SIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREG------------VPCFVGIGHAASITKIKI  387 (515)
Q Consensus       327 -------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~------------~~~~~~~~~~~~i~~~~~  387 (515)
                             .....+.......|..++..  ....++-..+|.|+.|-....            .+..........|..++.
T Consensus       141 ~g~~~~~~~p~~v~~l~~~~i~~va~G--~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~  218 (389)
T 3kci_A          141 HGNRSPCDRPRVIESLRGIEVVDVAAG--GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIAC  218 (389)
T ss_dssp             SSSCCCEEEEEECGGGTTSCEEEEEEC--SSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEE
T ss_pred             CCCCccCcCCeEecccCCCeEEEEEeC--cCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEE
Confidence                   11111222121245555544  345555667889999965321            111111112345777776


Q ss_pred             CCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEE
Q psy17610        388 SPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDY  467 (515)
Q Consensus       388 ~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~i  467 (515)
                      .....+.+....||.|..|-.................        ...+.......|..++..  ..+.++-..+|.|+.
T Consensus       219 G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~--------p~~v~~~~~~~v~~v~~G--~~hs~alt~~G~v~~  288 (389)
T 3kci_A          219 GSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------PMKIDSLTGLGVVKVECG--SQFSVALTKSGAVYT  288 (389)
T ss_dssp             CCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEE--------EEECGGGTTSCEEEEEEE--TTEEEEEETTSCEEE
T ss_pred             cCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccc--------cEEecccCCCcEEEEeCC--CCEEEEEeCCCeEEE
Confidence            5534566667789999999754322111100000000        000000111235555443  334444567899999


Q ss_pred             EecCCC-e----------eeeeecccccceEEEEEEcCCCcEEEEeecCCeEEEEE
Q psy17610        468 WETCDG-S----------IIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICL  512 (515)
Q Consensus       468 wd~~~~-~----------~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~  512 (515)
                      |-.... +          ....+.......|..++-..  ...+....||.|..|=
T Consensus       289 wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~v~~ia~G~--~h~~al~~~G~v~~wG  342 (389)
T 3kci_A          289 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGS--LHCVCCTEDGEVYTWG  342 (389)
T ss_dssp             EECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEECS--SEEEEEETTCCEEEEE
T ss_pred             EeCCCCCCCCCCCCccccCCeEeccCCCCCEEEEEecc--CeEEEECCCCCEEEee
Confidence            965321 0          11112211113455555432  3344456778777773

>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*

Probab=83.54  E-value=5.5  Score=37.67  Aligned_cols=60  Identities=18%  Similarity=0.194  Sum_probs=45.3

Q ss_pred             cEEEeeeccCCcEEEEeec------------CCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEe
Q psy17610        443 MIMSAAYHPSEVQLITCST------------NKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTG  502 (515)
Q Consensus       443 ~i~~~~~s~~~~~l~~~~~------------dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~  502 (515)
                      ....+.|.++|.+.+..+.            ...|+.++..++++...+.+.....++.++|+||++.|..+
T Consensus       477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~  548 (592)
T 4a9v_A          477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG  548 (592)
T ss_dssp             CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred             CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence            3678999999987774332            12577788878887777765544789999999999988775

>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}

Probab=81.71  E-value=23  Score=30.02  Aligned_cols=189  Identities=12%  Similarity=0.038  Sum_probs=101.8

Q ss_pred             CCcEEEEEECCCeEEEE---eCCCCceEEEEecCCCccEEEEEEcC-CCCEEEEEcCCCeEEEEEccCC------eeeee
Q psy17610        305 SEVQLITCSTNKMIDYW---ETCDGSIIRSLEGSDVAAVNCVDFVD-DGKYFLTGGADQIVKMWMYREG------VPCFV  374 (515)
Q Consensus       305 ~~~~l~~~~~~~~i~~~---d~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~------~~~~~  374 (515)
                      ....++..+..|.++..   ++...+... + ......|..+.... +..+++..+.+|.++-..+..-      .....
T Consensus        34 t~~~ll~fT~~G~v~~~~~~~lp~~~~~~-l-l~~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~  111 (276)
T 3no0_A           34 FTEGLFLVSNRGRVYWIAGSQALQGSKVS-L-KSREEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIK  111 (276)
T ss_dssp             TTSCEEEEETTSEEEEECSHHHHTSEECC-C-SSTTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSC
T ss_pred             CCCEEEEEcCCCeEEEEEhhhCccCcccc-c-CCCCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEe
Confidence            34445555566665543   222221111 2 22235555554322 4678999999999999887553      22222


Q ss_pred             ccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCc
Q psy17610        375 GIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEV  454 (515)
Q Consensus       375 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~  454 (515)
                      +.. .+.+..+........++..+..|.+..++.............            ...........|..+...+++.
T Consensus       112 lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~G------------v~~i~L~~~d~vv~~~~~~~~~  178 (276)
T 3no0_A          112 LTE-GDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARG------------VQGIKLEKNDETSGLRIWNGEP  178 (276)
T ss_dssp             CCT-TCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCC------------EECCCCCTTCCEEEEEEESSCS
T ss_pred             cCC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCC------------EEEEccCCCCEEEEEEEeCCCC
Confidence            332 345666666556667888889999888876543211100000            0011111224466665556677


Q ss_pred             EEEEeecCCeEEEEecCC-------CeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEEE
Q psy17610        455 QLITCSTNKMIDYWETCD-------GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKI  510 (515)
Q Consensus       455 ~l~~~~~dg~v~iwd~~~-------~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~i  510 (515)
                      .++..+..|.++...+..       ++-+..+. . .+.+..+....+...++..+.+|.+..
T Consensus       179 ~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i~-~-~~~lv~~~~~~~~~~i~~~t~~G~~ir  239 (276)
T 3no0_A          179 YLLVITAKGRVKKISHEEIPKTNRGVKGTEVSG-T-KDTLVDLIPIKEEVELLITTKNGKAFY  239 (276)
T ss_dssp             EEEEEETTSCEEEEEGGGSCCCCTTCCCEECCC-S-SSCEEEEEEESSEEEEEEEETTSCEEE
T ss_pred             EEEEEeCCCcEEEeEHHHcccCCCCCcceEEEc-C-CCcEEEEEEeCCCCEEEEEcCCCeEEE
Confidence            888999999998887643       22233332 2 244555444334445666677776554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	515
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	9e-30
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	4e-28
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	2e-21
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	2e-25
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	3e-23
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	3e-18
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	2e-17
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	1e-08
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	9e-08
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	6e-25
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	6e-18
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	1e-08
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	2e-05
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	4e-19
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	1e-11
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	1e-09
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	5e-06
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	2e-05
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	1e-17
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	7e-17
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	1e-11
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	2e-10
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	2e-08
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	5e-07
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	1e-06
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	1e-17
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	4e-10
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	6e-09
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	2e-05
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	3e-16
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	5e-16
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	2e-07
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	6e-14
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	5e-12
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	3e-09
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	6e-04
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	1e-13
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	5e-12
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	1e-07
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	2e-07
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	3e-05
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	3e-13
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	3e-08
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	1e-06
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	1e-05
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	3e-13
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	1e-07
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	6e-05
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	2e-11
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	5e-11
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	3e-11
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	3e-09
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	3e-05
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	9e-05
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	0.002
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	7e-11
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	1e-06
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	2e-06
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	5e-06
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	3e-05
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	2e-04
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	7e-10
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	2e-07
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	5e-05
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	7e-09
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	9e-06
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	1e-05
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	3e-08
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	4e-08
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	2e-07
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	8e-06
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	6e-05
d1hzua2	426	b.70.2.1 (A:118-543) C-terminal (heme d1) domain o	4e-06
d1qnia2	441	b.69.3.1 (A:10-450) Nitrous oxide reductase, N-ter	0.001

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  116 bits (291), Expect = 9e-30
 Identities = 60/326 (18%), Positives = 123/326 (37%), Gaps = 26/326 (7%)

Query: 81  DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVF 140
            S ++ + ++PV + +   + +  I + D  +G         HT ++ D+ F  +   + 
Sbjct: 17  RSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFDHSGKLLA 75

Query: 141 ATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKL 200
           +  +   I++W  +    +  +   +   + +    +G  I+S   D  I+ +  Q+G  
Sbjct: 76  SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYC 135

Query: 201 KFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQ 260
                  H   V  +   QDGT + S   +  VR+W +   ++  +  L+EH   V  I 
Sbjct: 136 VKTF-TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV--ATKECKAELREHRHVVECIS 192

Query: 261 IKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDY 320
              +S  +  +   G+                                L++ S +K I  
Sbjct: 193 WAPESSYSSISEATGSETKK---------------------SGKPGPFLLSGSRDKTIKM 231

Query: 321 WETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAA 380
           W+   G  + +L G D   V  V F   GK+ L+   D+ +++W Y+          H  
Sbjct: 232 WDVSTGMCLMTLVGHD-NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEH 290

Query: 381 SITKIKISPDKKVIVSVSADGGIFLW 406
            +T +        +V+ S D  + +W
Sbjct: 291 FVTSLDFHKTAPYVVTGSVDQTVKVW 316

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  112 bits (279), Expect = 4e-28
 Identities = 54/306 (17%), Positives = 113/306 (36%), Gaps = 5/306 (1%)

Query: 206 NAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSV-SVIQIKSD 264
           + H   VT +      + ++S   +  +++W    E+   +  LK HT SV  +    S 
Sbjct: 14  SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDY--ETGDFERTLKGHTDSVQDISFDHSG 71

Query: 265 SKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETC 324
              A  ++     +           +      + S +  P+   +++ S +K I  WE  
Sbjct: 72  KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQ 131

Query: 325 DGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITK 384
            G  +++  G     V  V    DG    +   DQ V++W+            H   +  
Sbjct: 132 TGYCVKTFTGHR-EWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVEC 190

Query: 385 IKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMI 444
           I  +P+        A G     +       +  SR  + K+   +     + ++   + +
Sbjct: 191 ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV 250

Query: 445 MSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA 504
               +H     +++C+ +K +  W+  +   +++L   +   V  +DF     Y +TG  
Sbjct: 251 RGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHE-HFVTSLDFHKTAPYVVTGSV 309

Query: 505 DQIVKI 510
           DQ VK+
Sbjct: 310 DQTVKV 315

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 92.9 bits (229), Expect = 2e-21
 Identities = 49/263 (18%), Positives = 91/263 (34%), Gaps = 1/263 (0%)

Query: 248 VLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEV 307
            L  H S V+ +         +SAS D T  +WD         +   +  +         
Sbjct: 12  ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 71

Query: 308 QLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYR 367
           +L+   +  M        G             V+ V  + +G + ++   D+ +KMW  +
Sbjct: 72  KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQ 131

Query: 368 EGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISR 427
            G       GH   +  ++ + D  +I S S D  + +W     E               
Sbjct: 132 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECI 191

Query: 428 STARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAV 487
           S A  +    +   +   +         L++ S +K I  W+   G  + +L G D   V
Sbjct: 192 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD-NWV 250

Query: 488 NCVDFVDDGKYFLTGGADQIVKI 510
             V F   GK+ L+   D+ +++
Sbjct: 251 RGVLFHSGGKFILSCADDKTLRV 273

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  104 bits (260), Expect = 2e-25
 Identities = 50/306 (16%), Positives = 88/306 (28%), Gaps = 24/306 (7%)

Query: 208 HNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKE 267
           H   + A+    D   L+S   +G++ IW     + +    +   +S V           
Sbjct: 54  HLAKIYAMHWGTDSRLLVSASQDGKLIIWDSY--TTNKVHAIPLRSSWVMTCAYAPSGNY 111

Query: 268 AMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDY---WETC 324
                 D  C +++L      + +       +                   D        
Sbjct: 112 VACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDI 171

Query: 325 DGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITK 384
           +     +        V  +    D + F++G  D   K+W  REG+      GH + I  
Sbjct: 172 ETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINA 231

Query: 385 IKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMI 444
           I   P+     + S D    L+                                 +   I
Sbjct: 232 ICFFPNGNAFATGSDDATCRLFDLRA------------------DQELMTYSHDNIICGI 273

Query: 445 MSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA 504
            S ++  S   L+    +   + W+         L G D   V+C+   DDG    TG  
Sbjct: 274 TSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHD-NRVSCLGVTDDGMAVATGSW 332

Query: 505 DQIVKI 510
           D  +KI
Sbjct: 333 DSFLKI 338

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 98.3 bits (243), Expect = 3e-23
 Identities = 43/286 (15%), Positives = 95/286 (33%), Gaps = 2/286 (0%)

Query: 123 HTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAIL 182
           H + IY + +  +   + +      + IW   T N++  I + +       +   G  + 
Sbjct: 54  HLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVA 113

Query: 183 SGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRES 242
            G  D     +  ++ +    +          L+  +           G         E+
Sbjct: 114 CGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIET 173

Query: 243 QSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP-SMIMSAA 301
                    HT  V  + +  D++  +S + D +  LWD+ +           S I +  
Sbjct: 174 GQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAIC 233

Query: 302 YHPSEVQLITCSTNKMI-DYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQI 360
           + P+     T S +     +    D  ++     + +  +  V F   G+  L G  D  
Sbjct: 234 FFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFN 293

Query: 361 VKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLW 406
             +W   +     V  GH   ++ + ++ D   + + S D  + +W
Sbjct: 294 CNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 83.6 bits (205), Expect = 3e-18
 Identities = 30/161 (18%), Positives = 56/161 (34%), Gaps = 3/161 (1%)

Query: 122 CHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAI 181
            HT  +  L    +     +       ++W VR        +        I F  +G A 
Sbjct: 182 GHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAF 241

Query: 182 LSGWNDGFIR-CFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTR 240
            +G +D   R        +L     +    G+T+++ ++ G  LL+G  +    +W    
Sbjct: 242 ATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDA-- 299

Query: 241 ESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWD 281
                  VL  H + VS + +  D     + S D    +W+
Sbjct: 300 LKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 80.9 bits (198), Expect = 2e-17
 Identities = 43/302 (14%), Positives = 101/302 (33%), Gaps = 26/302 (8%)

Query: 171 CIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGE 230
            + +  D + ++S   DG +  +   +      IP   +  V   A    G  +  GG +
Sbjct: 60  AMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL-RSSWVMTCAYAPSGNYVACGGLD 118

Query: 231 GQVRIWKLTRESQSLQCVLK-EHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLI 289
               I+ L     +++   +    +         D  + +++S D TC LWD+    +  
Sbjct: 119 NICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTT 178

Query: 290 IMILPSM-IMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDD 348
                +  +MS +  P     ++ + +     W+  +G   ++  G + + +N + F  +
Sbjct: 179 TFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHE-SDINAICFFPN 237

Query: 349 GKYFLTGGADQIVK--MWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLW 406
           G  F TG  D   +       + +  +        IT +  S   +++++   D    +W
Sbjct: 238 GNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVW 297

Query: 407 TFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMID 466
                          +  ++    R            +         + + T S +  + 
Sbjct: 298 DA--------LKADRAGVLAGHDNR------------VSCLGVTDDGMAVATGSWDSFLK 337

Query: 467 YW 468
            W
Sbjct: 338 IW 339

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 54.4 bits (129), Expect = 1e-08
 Identities = 29/207 (14%), Positives = 66/207 (31%), Gaps = 27/207 (13%)

Query: 330 RSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISP 389
           R+L G   A +  + +  D +  ++   D  + +W              ++ +     +P
Sbjct: 49  RTLRGHL-AKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAP 107

Query: 390 DKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSM------ 443
               +     D    ++     E +V  SR L+      +         I+ S       
Sbjct: 108 SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCA 167

Query: 444 -------------------IMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDV 484
                              +MS +  P     ++ + +     W+  +G   ++  G + 
Sbjct: 168 LWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHE- 226

Query: 485 AAVNCVDFVDDGKYFLTGGADQIVKIC 511
           + +N + F  +G  F TG  D   ++ 
Sbjct: 227 SDINAICFFPNGNAFATGSDDATCRLF 253

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 51.7 bits (122), Expect = 9e-08
 Identities = 19/112 (16%), Positives = 43/112 (38%), Gaps = 1/112 (0%)

Query: 81  DSGISSLQYNPVNNKVFVGTVNCEIFL-IDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSV 139
           +S I+++ + P  N    G+ +    L         +T  +      I  + F  +   +
Sbjct: 226 ESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLL 285

Query: 140 FATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIR 191
            A     +  +W     +    ++  +   +C+  T DG A+ +G  D F++
Sbjct: 286 LAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLK 337

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  104 bits (259), Expect = 6e-25
 Identities = 49/331 (14%), Positives = 106/331 (32%), Gaps = 37/331 (11%)

Query: 208 HNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQ----------------CVLKE 251
           H   V  +  + DG  L +G      ++++++  S   +                     
Sbjct: 61  HTSVVCCVKFSNDGEYLATGCN-KTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPS 119

Query: 252 HTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLIT 311
               +  +    D K   + + D    +WD+     ++I+      + +  +      + 
Sbjct: 120 SDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLV 179

Query: 312 CSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVP 371
             +                     +           DGKY   G  D+ V++W    G  
Sbjct: 180 SGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFL 239

Query: 372 CF-------VGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSK 424
                     G GH  S+  +  + D + +VS S D  + LW           + +  S 
Sbjct: 240 VERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNL--------QNANNKSD 291

Query: 425 ISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEG--- 481
                + +  +  +     ++S A   ++  +++ S ++ + +W+   G+ +  L+G   
Sbjct: 292 SKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRN 351

Query: 482 --SDVAAVNCVDFVDDGKYFLTGGADQIVKI 510
               VA  N      +   F TG  D   +I
Sbjct: 352 SVISVAVANGSSLGPEYNVFATGSGDCKARI 382

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 83.3 bits (204), Expect = 6e-18
 Identities = 49/332 (14%), Positives = 107/332 (32%), Gaps = 47/332 (14%)

Query: 123 HTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICA------------ 170
           HTS +  ++F  +     AT      +++ V   + + R+S  +                
Sbjct: 61  HTSVVCCVKFSND-GEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPS 119

Query: 171 ------CIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRL 224
                  + F+ DGK + +G  D  IR +  ++   + I+           ++    +  
Sbjct: 120 SDLYIRSVCFSPDGKFLATGAEDRLIRIWDIEN---RKIVMILQGHEQDIYSLDYFPSGD 176

Query: 225 LSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIK 284
               G G   +      +      L       +V     D K   + S D    +WD   
Sbjct: 177 KLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSET 236

Query: 285 STRLIIMILPSM--------IMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSD 336
              +  +   +         + S  +      +++ S ++ +  W   + +     +  +
Sbjct: 237 GFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPN 296

Query: 337 V-----------AAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKI 385
                         V  V    + +Y L+G  D+ V  W  + G P  +  GH  S+  +
Sbjct: 297 SGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISV 356

Query: 386 KI------SPDKKVIVSVSADGGIFLWTFPEL 411
            +       P+  V  + S D    +W + ++
Sbjct: 357 AVANGSSLGPEYNVFATGSGDCKARIWKYKKI 388

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 54.4 bits (129), Expect = 1e-08
 Identities = 49/315 (15%), Positives = 103/315 (32%), Gaps = 56/315 (17%)

Query: 208 HNRGVTALAITQDGTR---LLSGGGEGQVRIW--KLTRESQSLQCVLKEHTSSVSVIQIK 262
           H++ +    +  D       L         ++   L RE         +HTS V  ++  
Sbjct: 12  HSKPIPPFLLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFS 71

Query: 263 SDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWE 322
           +D +   +   + T  ++ +   + +  +   S   +A   P  +   +  ++       
Sbjct: 72  NDGEYLATGC-NKTTQVYRVSDGSLVARL---SDDSAANKDPENLNTSSSPSSD------ 121

Query: 323 TCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASI 382
                            +  V F  DGK+  TG  D+++++W         +  GH   I
Sbjct: 122 ---------------LYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDI 166

Query: 383 TKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPS 442
             +   P    +VS S D  + +W                            L + I   
Sbjct: 167 YSLDYFPSGDKLVSGSGDRTVRIWDLRT--------------------GQCSLTLSIEDG 206

Query: 443 MIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDV------AAVNCVDFVDDG 496
           +   A        +   S ++ +  W++  G ++  L+  +        +V  V F  DG
Sbjct: 207 VTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDG 266

Query: 497 KYFLTGGADQIVKIC 511
           +  ++G  D+ VK+ 
Sbjct: 267 QSVVSGSLDRSVKLW 281

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 44.4 bits (103), Expect = 2e-05
 Identities = 16/130 (12%), Positives = 42/130 (32%), Gaps = 17/130 (13%)

Query: 81  DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSG-----------FTLTLVNTCHTSAIYD 129
              + S+ +      V  G+++  + L ++ +             T  +    H   +  
Sbjct: 254 KDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLS 313

Query: 130 LQFPVNFSSVFATCSKNDIRIWSVRTLNELLRI-----SVMNM-ICACIVFTYDGKAILS 183
           +    N   + +      +  W  ++ N LL +     SV+++ +        +     +
Sbjct: 314 VATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFAT 373

Query: 184 GWNDGFIRCF 193
           G  D   R +
Sbjct: 374 GSGDCKARIW 383

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 86.4 bits (212), Expect = 4e-19
 Identities = 35/320 (10%), Positives = 96/320 (30%), Gaps = 20/320 (6%)

Query: 204 IPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCV-LKEHTSSVSVIQIK 262
           I  A    ++ + I    + LL    +G + ++K   +++++  +    +   +      
Sbjct: 6   IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFI 65

Query: 263 SDSKEAMSASTDGTCVLWDLIKS---TRLIIMILPSMIMSAAYHPSEVQLITCSTNKMID 319
            ++   +   T    +L   +      + +     ++ +       + +LI  S + +I+
Sbjct: 66  DNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIE 125

Query: 320 YWETCDGSIIRSLEG-----SDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREG----V 370
             +  +              +            +    + G  +  V+ +          
Sbjct: 126 VIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNG 185

Query: 371 PCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTA 430
                           +  +++     S DG + +  F +  DD   S+  + +  R   
Sbjct: 186 TIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNL 245

Query: 431 RSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCV 490
           + T L        + S  + P    L T  ++ +I  W       I++    +  +V  +
Sbjct: 246 KDTNLA-----YPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKI 300

Query: 491 DFVDDGKYFLTGGADQIVKI 510
                        +D   K 
Sbjct: 301 AC--SDNILCLATSDDTFKT 318

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 63.7 bits (153), Expect = 1e-11
 Identities = 30/311 (9%), Positives = 78/311 (25%), Gaps = 29/311 (9%)

Query: 81  DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGF-TLTLVNTC-HTSAIYDLQFPVNFSS 138
              IS ++  P  + + + + +  + +   +     + L+ +  +   +    F  N   
Sbjct: 11  KDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDL 70

Query: 139 VFATCSK-NDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQS 197
                +   +I    +        ++              G   L   +   +       
Sbjct: 71  QIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPR 130

Query: 198 GKLKFIIPNAHNRGV------TALAITQDGTRLLSGGGEGQVRIWKL--TRESQSLQCVL 249
                +I   +              +  + +RL+ G    QV+ ++L    +        
Sbjct: 131 NYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEES 190

Query: 250 KEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMIL---------------- 293
                   V  +  + +    +S DG   +                              
Sbjct: 191 GLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNL 250

Query: 294 PSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFL 353
              + S  + P    L T  ++ +I  W       I++    +  +V  +          
Sbjct: 251 AYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIAC--SDNILC 308

Query: 354 TGGADQIVKMW 364
              +D   K  
Sbjct: 309 LATSDDTFKTN 319

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 57.6 bits (137), Expect = 1e-09
 Identities = 31/288 (10%), Positives = 77/288 (26%), Gaps = 23/288 (7%)

Query: 64  DVSLYSAGVTALYLLKDDSGISSLQYNPVNNK-VFVGTVNCEIFLIDMNSGFTLTLVNTC 122
              + +  V  L  L+    +    +    +  ++VGTV  EI  +D+    +   +   
Sbjct: 39  KFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNN 98

Query: 123 HTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRT------LNELLRISVMNMICACIVFTY 176
             +             + A      I +   R         + L  +   +         
Sbjct: 99  EANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDT 158

Query: 177 DGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRG---VTALAITQDGTRLLSGGGEGQV 233
           +   ++ G N+  ++ F     +                    + ++         +G+V
Sbjct: 159 NSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRV 218

Query: 234 RIWKLTRESQSLQCVLK-------------EHTSSVSVIQIKSDSKEAMSASTDGTCVLW 280
            +     +        +                  V+ I+     K   +A +DG    W
Sbjct: 219 AVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCW 278

Query: 281 DLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSI 328
           +L    ++      +         S+  L   +++         D +I
Sbjct: 279 NLQTRKKIKNFAKFNEDSVVKIACSDNILCLATSDDTFKTNAAIDQTI 326

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 46.4 bits (108), Expect = 5e-06
 Identities = 30/316 (9%), Positives = 82/316 (25%), Gaps = 30/316 (9%)

Query: 119 VNTCHTSAIYDLQFPVNFSSVFATCSK-NDIRIWSVRTLNELLRISVM----NMICACIV 173
           +       I D++   +  S+    S    + ++      + + +       + +  C  
Sbjct: 6   IEQAPKDYISDIKIIPS-KSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNF 64

Query: 174 FTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQV 233
                  I  G   G I             + N                +L++   +G +
Sbjct: 65  IDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLI 124

Query: 234 RIWKLTRESQSLQCVLKEHTSSVS----VIQIKSDSKEAMSASTDGTCVLWDLIKSTRLI 289
            +         +  V   ++++      +  + ++S   +    +     + L       
Sbjct: 125 EVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDN 184

Query: 290 IM-----ILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLE----------- 333
                  +   +   A     +      S +  +      D     +             
Sbjct: 185 GTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLN 244

Query: 334 ---GSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPD 390
               +    VN ++F    K+  T G+D I+  W  +               + +KI+  
Sbjct: 245 LKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRK-KIKNFAKFNEDSVVKIACS 303

Query: 391 KKVIVSVSADGGIFLW 406
             ++   ++D      
Sbjct: 304 DNILCLATSDDTFKTN 319

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 44.5 bits (103), Expect = 2e-05
 Identities = 17/172 (9%), Positives = 40/172 (23%), Gaps = 23/172 (13%)

Query: 103 CEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRI 162
               L            +            P        +     + +       +    
Sbjct: 173 QWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNS 232

Query: 163 SVMNMI---------------CACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNA 207
           S                       I F+   K + +  +DG I C+  Q+ K        
Sbjct: 233 SKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF 292

Query: 208 HNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVI 259
           +    + + I      L     +   +      ++      ++ + SS+ +I
Sbjct: 293 N--EDSVVKIACSDNILCLATSDDTFKTNAAIDQT------IELNASSIYII 336

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.8 bits (200), Expect = 1e-17
 Identities = 40/289 (13%), Positives = 86/289 (29%), Gaps = 10/289 (3%)

Query: 123 HTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICA-----CIVFTYD 177
           H   +  +      +    T  K  +++W +        +S ++ +             D
Sbjct: 50  HGEVVCAVTISNP-TRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPD 108

Query: 178 GKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWK 237
           G  ++ G     +  +   +   +       +            +++             
Sbjct: 109 GCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW 168

Query: 238 LTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMI 297
                  ++        +  +      +K   +   D T   WDL +  +L      S I
Sbjct: 169 DLHNQTLVRQFQGHTDGASCIDISNDGTKL-WTGGLDNTVRSWDLREGRQLQQHDFTSQI 227

Query: 298 MSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA 357
            S  Y P+   L     +  ++          +         V  + F   GK+F++ G 
Sbjct: 228 FSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESC--VLSLKFAYCGKWFVSTGK 285

Query: 358 DQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLW 406
           D ++  W    G   F     ++S+    IS D K IV+ S D    ++
Sbjct: 286 DNLLNAWRTPYGASIFQ-SKESSSVLSCDISVDDKYIVTGSGDKKATVY 333

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.5 bits (194), Expect = 7e-17
 Identities = 50/329 (15%), Positives = 98/329 (29%), Gaps = 32/329 (9%)

Query: 187 DGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLT---RESQ 243
           D  I    P+  +    +   H   V A+ I+     + +GG +G V++W ++    +S 
Sbjct: 31  DALIGPGIPRHARQINTL--NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSP 87

Query: 244 SLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYH 303
             Q       + +   ++  D    +      T  +WDL   T  I   L S   +    
Sbjct: 88  VSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYAL 147

Query: 304 PSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFL--TGGADQIV 361
                   C +          D      +                       TGG D  V
Sbjct: 148 AISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTV 207

Query: 362 KMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSL 421
           + W  RE           + I  +   P  + +        + +                
Sbjct: 208 RSWDLRE-GRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVN------------ 254

Query: 422 SSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEG 481
                    +  +  + +  S ++S  +       ++   + +++ W T  G+ I   + 
Sbjct: 255 ---------KPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKE 305

Query: 482 SDVAAVNCVDFVDDGKYFLTGGADQIVKI 510
           S   +V   D   D KY +TG  D+   +
Sbjct: 306 SS--SVLSCDISVDDKYIVTGSGDKKATV 332

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.7 bits (153), Expect = 1e-11
 Identities = 43/326 (13%), Positives = 102/326 (31%), Gaps = 29/326 (8%)

Query: 148 IRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSG----KLKFI 203
           I     R   ++  ++   ++C  +  +   + + +G   G ++ +          +  +
Sbjct: 34  IGPGIPRHARQINTLNHGEVVC-AVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQL 91

Query: 204 IPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKS 263
                +  + +  +  DG  L+ GG    + IW L   +  ++  L     +   + I  
Sbjct: 92  DCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISP 151

Query: 264 DSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWET 323
           DSK   S  +DG   +WDL   T +          ++    S       +          
Sbjct: 152 DSKVCFSCCSDGNIAVWDLHNQTLVRQFQ-GHTDGASCIDISNDGTKLWTGGLDNTVRSW 210

Query: 324 CDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASIT 383
                 +  +    + +  + +   G++   G     V++    +     + + H + + 
Sbjct: 211 DLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHL-HESCVL 269

Query: 384 KIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSM 443
            +K +   K  VS   D  +  W                      T     +      S 
Sbjct: 270 SLKFAYCGKWFVSTGKDNLLNAW---------------------RTPYGASIFQSKESSS 308

Query: 444 IMSAAYHPSEVQLITCSTNKMIDYWE 469
           ++S      +  ++T S +K    +E
Sbjct: 309 VLSCDISVDDKYIVTGSGDKKATVYE 334

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.4 bits (142), Expect = 2e-10
 Identities = 13/73 (17%), Positives = 29/73 (39%), Gaps = 2/73 (2%)

Query: 166 NMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLL 225
                 + F Y GK  +S   D  +  +    G   F      +  V +  I+ D   ++
Sbjct: 265 ESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS--KESSSVLSCDISVDDKYIV 322

Query: 226 SGGGEGQVRIWKL 238
           +G G+ +  ++++
Sbjct: 323 TGSGDKKATVYEV 335

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.7 bits (127), Expect = 2e-08
 Identities = 19/120 (15%), Positives = 40/120 (33%), Gaps = 7/120 (5%)

Query: 165 MNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRL 224
                  + +   G+ +  G     +        K      + H   V +L     G   
Sbjct: 223 FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVN--KPDKYQLHLHESCVLSLKFAYCGKWF 280

Query: 225 LSGGGEGQVRIWKLTRESQSLQCVLK-EHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLI 283
           +S G +  +  W+          + + + +SSV    I  D K  ++ S D    ++++I
Sbjct: 281 VSTGKDNLLNAWRT----PYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEVI 336

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.4 bits (116), Expect = 5e-07
 Identities = 44/256 (17%), Positives = 84/256 (32%), Gaps = 6/256 (2%)

Query: 68  YSAGVTALYLLKDDSGISSLQYNPVNNKVFVGT-VNCEIFLIDMNSGFTLTLVNTCHTSA 126
             + V+ L  L  D+ I S +  P    + VG   +             +    T    A
Sbjct: 84  NKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPA 143

Query: 127 IYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWN 186
            Y L    +    F+ CS  +I +W +     + +        +CI  + DG  + +G  
Sbjct: 144 CYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGL 203

Query: 187 DGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQ 246
           D  +R +  + G+      +     + +L     G  L  G     V +  + +  +   
Sbjct: 204 DNTVRSWDLREGRQLQ--QHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQL 261

Query: 247 CVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSE 306
                H S V  ++     K  +S   D     W       +      S ++S      +
Sbjct: 262 H---LHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDD 318

Query: 307 VQLITCSTNKMIDYWE 322
             ++T S +K    +E
Sbjct: 319 KYIVTGSGDKKATVYE 334

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.9 bits (112), Expect = 1e-06
 Identities = 26/175 (14%), Positives = 51/175 (29%), Gaps = 8/175 (4%)

Query: 305 SEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMW 364
            ++Q +    + +I          I +L   +   V  V   +  ++  TGG    VK+W
Sbjct: 21  GQMQPVPFPPDALIGPGIPRHARQINTLNHGE--VVCAVTISNPTRHVYTGG-KGCVKVW 77

Query: 365 -----MYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSR 419
                  +  V     +     I   K+ PD   ++       + +W        +    
Sbjct: 78  DISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAEL 137

Query: 420 SLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGS 474
           + S+    + A S    +        + A      Q +        D     D S
Sbjct: 138 TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS 192

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 82.2 bits (201), Expect = 1e-17
 Identities = 48/367 (13%), Positives = 103/367 (28%), Gaps = 50/367 (13%)

Query: 171 CIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIP-NAHNRGVTALAITQDGTRLLSGGG 229
           C  +  D   I    N+  +  +     K   +     HN  VT +    D  R+++ G 
Sbjct: 12  CHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGT 71

Query: 230 EGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLI 289
           +    +W L   +     V+     +   ++   + K+    S      +    +     
Sbjct: 72  DRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWW 131

Query: 290 IMILPSM-----IMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGS--------- 335
           +           ++S  +HP+ V L   S +     +      +      +         
Sbjct: 132 VCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFG 191

Query: 336 --------DVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKI 387
                       V+ V F  +G        D  V +    + +           +  +  
Sbjct: 192 ELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTF 251

Query: 388 SPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSA 447
             +  ++ +   D    L+T+    D      S   ++      S R +           
Sbjct: 252 ITESSLVAAGH-DCFPVLFTY----DSAAGKLSFGGRLDVPKQSSQRGL----------- 295

Query: 448 AYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKY----FLTGG 503
               +  +       K         G+ + SL  +   +V+ +  +  GK     F T G
Sbjct: 296 ----TARERFQNLDKKASSEGSAAAGAGLDSLHKN---SVSQISVLSGGKAKCSQFCTTG 348

Query: 504 ADQIVKI 510
            D  + I
Sbjct: 349 MDGGMSI 355

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 59.1 bits (141), Expect = 4e-10
 Identities = 43/363 (11%), Positives = 100/363 (27%), Gaps = 30/363 (8%)

Query: 84  ISSLQYNPVNNKVFVGTVNCEIFLIDMNSG-FTLTLVNTCHTSAIYDLQFPVNFSSVFAT 142
           IS   +N    ++ +   N E+ + + +   +        H   +  + +  + S+   T
Sbjct: 10  ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPD-SNRIVT 68

Query: 143 CSK-NDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGW-----NDGFIRCFTPQ 196
           C    +  +W+++       + ++ +  A     +                         
Sbjct: 69  CGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQEN 128

Query: 197 SGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQS------------ 244
              +   I       V +L    +   L +G  + + RI+    +               
Sbjct: 129 DWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKM 188

Query: 245 ----LQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSA 300
               L          V  +   ++       S D T  L D  K   +  +   ++ + A
Sbjct: 189 PFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLA 248

Query: 301 AYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQI 360
               +E  L+    +     +     +   S  G               +        + 
Sbjct: 249 VTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKA 308

Query: 361 VKMWMYREGVPCFVGIGHAASITKIKISPDKK----VIVSVSADGGIFLWTFPELEDDVG 416
                   G    +   H  S+++I +    K       +   DGG+ +W    LE  + 
Sbjct: 309 SSEGSAAAGAG--LDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLESALK 366

Query: 417 DSR 419
           D +
Sbjct: 367 DLK 369

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 55.6 bits (132), Expect = 6e-09
 Identities = 14/75 (18%), Positives = 26/75 (34%), Gaps = 2/75 (2%)

Query: 337 VAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGI--GHAASITKIKISPDKKVI 394
           V  ++C  +  D         +  V ++         V     H   +T +  +PD   I
Sbjct: 7   VEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRI 66

Query: 395 VSVSADGGIFLWTFP 409
           V+   D   ++WT  
Sbjct: 67  VTCGTDRNAYVWTLK 81

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 44.5 bits (103), Expect = 2e-05
 Identities = 23/265 (8%), Positives = 72/265 (27%), Gaps = 11/265 (4%)

Query: 252 HTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP---SMIMSAAYHPSEVQ 308
               +S      D  +      +    +++   +  + +  L      +    + P   +
Sbjct: 6   LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNR 65

Query: 309 LITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMW---- 364
           ++TC T++    W     +   +L    +            +     G+   V       
Sbjct: 66  IVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFE 125

Query: 365 -MYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSS 423
                 V   +     +++  +   P+  ++ + S D    +++    E +   + +   
Sbjct: 126 QENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWG 185

Query: 424 KISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSD 483
                               +    +  +  ++   S +  +      D  +  +   S+
Sbjct: 186 SKMPFGELMFESSSS--CGWVHGVCFSANGSRVAWVSHDSTVCLA-DADKKMAVATLASE 242

Query: 484 VAAVNCVDFVDDGKYFLTGGADQIV 508
              +  V F+ +      G     V
Sbjct: 243 TLPLLAVTFITESSLVAAGHDCFPV 267

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.9 bits (190), Expect = 3e-16
 Identities = 50/346 (14%), Positives = 126/346 (36%), Gaps = 36/346 (10%)

Query: 173 VFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQ 232
              + G  I+SG +D  ++ ++  +GK    +   H  GV +  +  +          G 
Sbjct: 22  CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTL-VGHTGGVWSSQMRDNIII------SGS 74

Query: 233 VRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMI 292
                    +++ +C+   +  + +V  +    K  +S S D T  +WD I++ + + ++
Sbjct: 75  TDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWD-IETGQCLHVL 133

Query: 293 LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYF 352
           +  +           ++++ + + M+  W+    + + +L+G             DG + 
Sbjct: 134 MGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTN---RVYSLQFDGIHV 190

Query: 353 LTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELE 412
           ++G  D  +++W    G       GH +  + +++  +  ++VS +AD  + +W      
Sbjct: 191 VSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIW------ 242

Query: 413 DDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCD 472
                           T +  + +               ++  +IT S +  +  W+   
Sbjct: 243 -------------DIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKT 289

Query: 473 GSIIRSLEGSDV----AAVNCVDFVDDGKYFLTGGADQIVKICLYI 514
           G  IR+L   +       V  +   +       G  +   +  L +
Sbjct: 290 GEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLV 335

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.2 bits (188), Expect = 5e-16
 Identities = 55/340 (16%), Positives = 123/340 (36%), Gaps = 24/340 (7%)

Query: 80  DDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSV 139
           DD  I+ LQ+    N++  G+ +  + +    +G         HT  ++  Q   N    
Sbjct: 16  DDHVITCLQFCG--NRIVSGSDDNTLKVWSAVTG-KCLRTLVGHTGGVWSSQMRDNIIIS 72

Query: 140 FATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGK 199
            +T     +              ++              K ++SG  D  +R +  ++G+
Sbjct: 73  GSTDRTLKVWNAETGECI----HTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQ 128

Query: 200 LKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVI 259
              ++            +  DG R++SG  +  V++W    E     C+      +  V 
Sbjct: 129 CLHVL---MGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETE----TCLHTLQGHTNRVY 181

Query: 260 QIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMID 319
            ++ D    +S S D +  +WD+ ++   I  +     +++     +  L++ + +  + 
Sbjct: 182 SLQFDGIHVVSGSLDTSIRVWDV-ETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVK 240

Query: 320 YWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREG-----VPCFV 374
            W+   G  +++L+G +           +  + +T   D  VK+W  + G     +    
Sbjct: 241 IWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLE 300

Query: 375 GIGHAASITKIKISPDKKVIVSVSADGG----IFLWTFPE 410
             G    + +I+ S  K V    S +G     + +  F  
Sbjct: 301 SGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 340

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.0 bits (120), Expect = 2e-07
 Identities = 26/206 (12%), Positives = 71/206 (34%), Gaps = 21/206 (10%)

Query: 321 WETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAA 380
           W   +    + L+G D   + C+ F   G   ++G  D  +K+W    G      +GH  
Sbjct: 1   WRRGELKSPKVLKGHDDHVITCLQF--CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG 58

Query: 381 SITKIKISPDKKVIVSVSADGGIFLW----------------TFPELEDDVGDSRSLSSK 424
            +   ++  +  +  S      ++                      L +    S S  + 
Sbjct: 59  GVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDAT 118

Query: 425 ISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDV 484
           +      + + + +++  +           ++++ + + M+  W+    + + +L+G   
Sbjct: 119 LRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHT- 177

Query: 485 AAVNCVDFVDDGKYFLTGGADQIVKI 510
                     DG + ++G  D  +++
Sbjct: 178 --NRVYSLQFDGIHVVSGSLDTSIRV 201

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.3 bits (170), Expect = 6e-14
 Identities = 47/311 (15%), Positives = 99/311 (31%), Gaps = 41/311 (13%)

Query: 208 HNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKE 267
            ++GV  L    D  +++SG  +  ++IW     +   + +L  HT SV  +Q       
Sbjct: 14  TSKGVYCLQY--DDQKIVSGLRDNTIKIWDK--NTLECKRILTGHTGSVLCLQYDERVII 69

Query: 268 AMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGS 327
             S+ +       +  +    +I    +++     +   V      +  + D     D +
Sbjct: 70  TGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDIT 129

Query: 328 IIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKI 387
           + R L G             D KY ++   D+ +K+W            GH   I  ++ 
Sbjct: 130 LRRVLVGHR---AAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY 186

Query: 388 SPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSA 447
                ++VS S+D  I LW                             + ++     +  
Sbjct: 187 RDR--LVVSGSSDNTIRLWDI----------------------ECGACLRVLEGHEELVR 222

Query: 448 AYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDV--------AAVNCVDFVDDGKYF 499
                  ++++ + +  I  W+       R+  G+            V  + F  D    
Sbjct: 223 CIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQI 280

Query: 500 LTGGADQIVKI 510
           ++   D  + I
Sbjct: 281 VSSSHDDTILI 291

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.5 bits (155), Expect = 5e-12
 Identities = 46/294 (15%), Positives = 93/294 (31%), Gaps = 25/294 (8%)

Query: 123 HTSAIYDLQFPVNFSSVFATCSK-NDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAI 181
            +  +Y LQ+         +  + N I+IW   TL     ++       C+ +       
Sbjct: 14  TSKGVYCLQYD---DQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIIT 70

Query: 182 LSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRE 241
            S  +   +            I        +                 +  + +W     
Sbjct: 71  GSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCS-----KDRSIAVWD-MAS 124

Query: 242 SQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAA 301
              +           +V  +  D K  +SAS D T  +W+   +   +  +       A 
Sbjct: 125 PTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNT-STCEFVRTLNGHKRGIAC 183

Query: 302 YHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIV 361
               +  +++ S++  I  W+   G+ +R LEG +           D K  ++G  D  +
Sbjct: 184 LQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE---LVRCIRFDNKRIVSGAYDGKI 240

Query: 362 KMWMYREG---------VPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLW 406
           K+W              +     + H+  + ++    D+  IVS S D  I +W
Sbjct: 241 KVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRL--QFDEFQIVSSSHDDTILIW 292

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.0 bits (133), Expect = 3e-09
 Identities = 36/187 (19%), Positives = 70/187 (37%), Gaps = 14/187 (7%)

Query: 102 NCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLR 161
           +  I + DM S   +TL                +   + +      I++W+  T   +  
Sbjct: 114 DRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFV-- 171

Query: 162 ISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDG 221
            ++           Y  + ++SG +D  IR +  + G    ++            I  D 
Sbjct: 172 RTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRC---IRFDN 228

Query: 222 TRLLSGGGEGQVRIWKLTRESQ-------SLQCVLKEHTSSVSVIQIKSDSKEAMSASTD 274
            R++SG  +G++++W L                 L EH+  V  +Q   D  + +S+S D
Sbjct: 229 KRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHD 286

Query: 275 GTCVLWD 281
            T ++WD
Sbjct: 287 DTILIWD 293

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (90), Expect = 6e-04
 Identities = 22/195 (11%), Positives = 61/195 (31%), Gaps = 24/195 (12%)

Query: 335 SDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVI 394
                V C+ +  D +  ++G  D  +K+W         +  GH  S+  ++      + 
Sbjct: 13  ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIIT 70

Query: 395 VSVSADGGIFLWTFPELEDDVGDSRSLSSKI-------------------SRSTARSTRL 435
            S  +   ++     E+ + +         +                     ++     L
Sbjct: 71  GSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITL 130

Query: 436 IIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDD 495
             +++            +  +++ S ++ I  W T     +R+L G              
Sbjct: 131 RRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHK---RGIACLQYR 187

Query: 496 GKYFLTGGADQIVKI 510
            +  ++G +D  +++
Sbjct: 188 DRLVVSGSSDNTIRL 202

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 69.2 bits (167), Expect = 1e-13
 Identities = 35/307 (11%), Positives = 74/307 (24%), Gaps = 16/307 (5%)

Query: 207 AHNRG-VTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDS 265
              RG    L  T  G ++    G   V    +   S +   +  EH+   +V +     
Sbjct: 14  RTARGTAVVLGNTPAGDKIQYCNGTS-VYTVPV--GSLTDTEIYTEHSHQTTVAKTSPSG 70

Query: 266 KEAMSASTDGTCVLWDLIKSTRLIIMILPSMI--MSAAYHPSEVQLITCSTNKMIDYWET 323
               S    G   +WD  ++T ++   +P     +      SE + I         +   
Sbjct: 71  YYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHV 130

Query: 324 CDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASIT 383
                  S       A                 +          EG P            
Sbjct: 131 FLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTK 190

Query: 384 KIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSM 443
            +            ++ GG          D                     L  +     
Sbjct: 191 FVHSVRYNPDGSLFASTGGDGTIVLYNGVDGT----------KTGVFEDDSLKNVAHSGS 240

Query: 444 IMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGG 503
           +    + P   ++ + S +K I  W      + +++          +  +   +  ++  
Sbjct: 241 VFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSIS 300

Query: 504 ADQIVKI 510
           A+  +  
Sbjct: 301 ANGFINF 307

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 64.5 bits (155), Expect = 5e-12
 Identities = 38/280 (13%), Positives = 73/280 (26%), Gaps = 10/280 (3%)

Query: 137 SSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQ 196
                 C+   +    V +L +    +  +        +  G    SG   G +R +   
Sbjct: 29  GDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTT 88

Query: 197 SGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSV 256
                         G          ++ ++  GEG+ R   +               +  
Sbjct: 89  QTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARA 148

Query: 257 SVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYH---PSEVQLITCS 313
                   S+     S      +                           P      +  
Sbjct: 149 MNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTG 208

Query: 314 TNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVD------DGKYFLTGGADQIVKMWMYR 367
            +  I  +   DG+     E   +  V     V       DG    +  AD+ +K+W   
Sbjct: 209 GDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVA 268

Query: 368 EG-VPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLW 406
              V   + +G      ++ I   K+ +VS+SA+G I   
Sbjct: 269 TLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFV 308

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 51.1 bits (120), Expect = 1e-07
 Identities = 47/309 (15%), Positives = 83/309 (26%), Gaps = 31/309 (10%)

Query: 171 CIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGE 230
            +  T  G  I    N   +      S     I    H+   T    +  G    SG   
Sbjct: 22  VLGNTPAGDKIQYC-NGTSVYTVPVGSLTDTEIY-TEHSHQTTVAKTSPSGYYCASGDVH 79

Query: 231 GQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLII 290
           G VRIW  T+ +  L+  +   +  V  I   S+SK   +            +  T    
Sbjct: 80  GNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSN 139

Query: 291 MILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAV---------- 340
             L     +      +        +   D             + +               
Sbjct: 140 GNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNP 199

Query: 341 NCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSAD 400
           +   F   G        + +               + H+ S+  +  SPD   I S SAD
Sbjct: 200 DGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD 259

Query: 401 GGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCS 460
             I +W       +V            +T +  + I +             ++  L++ S
Sbjct: 260 KTIKIW-------NV------------ATLKVEKTIPVGTRIEDQQLGIIWTKQALVSIS 300

Query: 461 TNKMIDYWE 469
            N  I++  
Sbjct: 301 ANGFINFVN 309

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 50.3 bits (118), Expect = 2e-07
 Identities = 36/289 (12%), Positives = 81/289 (28%), Gaps = 12/289 (4%)

Query: 86  SLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSK 145
            L   P  +K+        ++ + + S  T T + T H+      +   +     +    
Sbjct: 22  VLGNTPAGDKIQYCNGTS-VYTVPVGSL-TDTEIYTEHSHQTTVAKTSPSGYYCASGDVH 79

Query: 146 NDIRIW--SVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFI 203
            ++RIW  +  T      I V +     I +  + K I +                    
Sbjct: 80  GNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSN 139

Query: 204 IPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKS 263
                          +         G     +          +    EHT  V  ++   
Sbjct: 140 GNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNP 199

Query: 264 DSKEAMSASTDGTCVLWDLIKSTRLIIMILP--------SMIMSAAYHPSEVQLITCSTN 315
           D     S   DGT VL++ +  T+  +              +    + P   ++ + S +
Sbjct: 200 DGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD 259

Query: 316 KMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMW 364
           K I  W      + +++          +  +   +  ++  A+  +   
Sbjct: 260 KTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFV 308

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 43.7 bits (101), Expect = 3e-05
 Identities = 11/68 (16%), Positives = 27/68 (39%), Gaps = 3/68 (4%)

Query: 216 AITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTS-SVSVIQIKSDSKEAMSASTD 274
             + DGT++ S   +  ++IW +   +  ++  +   T      + I    +  +S S +
Sbjct: 245 TWSPDGTKIASASADKTIKIWNV--ATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISAN 302

Query: 275 GTCVLWDL 282
           G     + 
Sbjct: 303 GFINFVNP 310

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 68.8 bits (166), Expect = 3e-13
 Identities = 44/341 (12%), Positives = 98/341 (28%), Gaps = 6/341 (1%)

Query: 173 VFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQ 232
              ++   +++G +D  IR +   + K    + + H+ GV AL     G  L+SG  +  
Sbjct: 18  CLQFEDNYVITGADDKMIRVYDSINKKFLLQL-SGHDGGVWALKYAHGG-ILVSGSTDRT 75

Query: 233 VRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMI 292
           VR+W + +   +        T     I    + K  ++ S D T  +W L K + +    
Sbjct: 76  VRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHG 135

Query: 293 LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYF 352
                    + P E           +    T  G     + GS    +   D       +
Sbjct: 136 EEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLY 195

Query: 353 LTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELE 412
           +  G    +   +Y       +      +I    +   + +         + L    +  
Sbjct: 196 ILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKF 255

Query: 413 DDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCD 472
                +      I    A           + + +         ++   +    + +    
Sbjct: 256 LVSAAADG---SIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRS 312

Query: 473 GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLY 513
           G ++ +    D   +  V+F            D    + + 
Sbjct: 313 GKLVHANILKDADQIWSVNFKGKT-LVAAVEKDGQSFLEIL 352

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 53.4 bits (126), Expect = 3e-08
 Identities = 38/327 (11%), Positives = 80/327 (24%), Gaps = 30/327 (9%)

Query: 81  DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVF 140
           D G+ +L+Y      V   T              T        T    D+    N   + 
Sbjct: 53  DGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIV 112

Query: 141 ATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKL 200
                N + +W +   + +      +          +    +           T      
Sbjct: 113 TGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGN 172

Query: 201 KFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQ 260
             +                         G     +            +L  HT  +    
Sbjct: 173 IVVS------------------------GSYDNTLIVWDVAQMKCLYILSGHTDRIYSTI 208

Query: 261 IKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDY 320
              + K  +SAS D T  +WDL     +  +   + ++       +  +   +   +  +
Sbjct: 209 YDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGW 268

Query: 321 WETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGI-GHA 379
                         +    ++ +         L  G++    ++  R G      I   A
Sbjct: 269 DANDYSRKFSYHHTN----LSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDA 324

Query: 380 ASITKIKISPDKKVIVSVSADGGIFLW 406
             I  +       ++ +V  DG  FL 
Sbjct: 325 DQIWSVNFKGK-TLVAAVEKDGQSFLE 350

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 48.0 bits (112), Expect = 1e-06
 Identities = 14/161 (8%), Positives = 41/161 (25%), Gaps = 2/161 (1%)

Query: 122 CHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAI 181
            +  + +  +              +     ++R  +      +  +     +      + 
Sbjct: 194 LYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSD 253

Query: 182 LSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRE 241
               +                   + H+  ++A+        +L  G E Q  I+ L R 
Sbjct: 254 KFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNL-RS 312

Query: 242 SQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDL 282
            + +   + +    +  +          +   DG   L  L
Sbjct: 313 GKLVHANILKDADQIWSVNF-KGKTLVAAVEKDGQSFLEIL 352

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 44.9 bits (104), Expect = 1e-05
 Identities = 11/66 (16%), Positives = 28/66 (42%), Gaps = 2/66 (3%)

Query: 331 SLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPD 390
           +L G   + + C+ F  +  Y +TG  D++++++            GH   +  +K +  
Sbjct: 7   TLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG 64

Query: 391 KKVIVS 396
             ++  
Sbjct: 65  GILVSG 70

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 68.7 bits (166), Expect = 3e-13
 Identities = 45/356 (12%), Positives = 108/356 (30%), Gaps = 37/356 (10%)

Query: 176 YDGKAILSGWNDGFIRCFTPQSGKLKFIIPN-----AHNRGVTALAITQ-------DGTR 223
                 +S   DG+++ +  +    +           H  G+  + + Q       +   
Sbjct: 22  ACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCL 81

Query: 224 LLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLI 283
           + +    G +  +++TRE ++    +      +    +K  S  A+        +L   +
Sbjct: 82  VATTSFSGDLLFYRITREDET--KKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRL 139

Query: 284 KSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCV 343
            +T +            A           S +  +++  T +         +       V
Sbjct: 140 VATDVKGTTYIWKFHPFAD---------ESNSLTLNWSPTLELQGTVESPMTPSQFATSV 190

Query: 344 DFVDDGKYFLTGGADQIVKMWMYREGVPCFVG------IGHAASITKIKISPDKKVIVSV 397
           D  + G    TG  +  V++       P +        I ++ SI  +K SP   ++   
Sbjct: 191 DISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIA 249

Query: 398 SADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLI 457
                    T      +      + S    + +    L      S +MS +++ S   L 
Sbjct: 250 HDSNSFGCITLY----ETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLC 305

Query: 458 TCSTNKMIDYWETCDGSIIRSLEG--SDV-AAVNCVDFVDDGKYFLTGGADQIVKI 510
           +   +  + +W+      I +L     D+    + +   + G      G   +  +
Sbjct: 306 SAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFL 361

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 51.8 bits (122), Expect = 1e-07
 Identities = 36/341 (10%), Positives = 93/341 (27%), Gaps = 73/341 (21%)

Query: 123 HTSAIYDLQFPVNFSSVFATCSK-NDIRIWSVRTLNELLRI---------------SVMN 166
           H   +  ++       + AT S   D+  + +   +E  ++               S   
Sbjct: 65  HVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWA 124

Query: 167 MICACIVFTYDGKAILSGWNDGFIRCFTPQSGK-----------------LKFIIPNAHN 209
           +             +++    G    +                            P   +
Sbjct: 125 LKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPS 184

Query: 210 RGVTALAITQDGTRLLSGGGEGQVRI----WKLTRESQSLQCVLKEHTSSVSVIQIKSDS 265
           +  T++ I++ G  + +G   G V+I          +   Q  +  +++S+  ++     
Sbjct: 185 QFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQG 243

Query: 266 KEAMSASTDG-----------------TCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQ 308
                A                     +  +        L      S +MS +++ S   
Sbjct: 244 SLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGET 303

Query: 309 LITCSTNKMIDYWETCDGSIIRSLEG--SDV-AAVNCVDFVDDGKYFLTGGADQIVKMWM 365
           L +   +  + +W+      I +L     D+    + +   + G      G   +  +  
Sbjct: 304 LCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPG---VFDVKF 360

Query: 366 YREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLW 406
            ++G    +G            +   + +  V  D  I  +
Sbjct: 361 LKKGWRSGMG------------ADLNESLCCVCLDRSIRWF 389

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.9 bits (99), Expect = 6e-05
 Identities = 25/265 (9%), Positives = 55/265 (20%), Gaps = 64/265 (24%)

Query: 248 VLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEV 307
             K H + +  +     +   +S S DG   +WD                          
Sbjct: 9   AGKAHDADIFSVSA--CNSFTVSCSGDGYLKVWDN------------------------- 41

Query: 308 QLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVD-DGKYFLTGGADQIVKMWMY 366
                      +  +      +       V  +  ++    +     T      +  +  
Sbjct: 42  -----KLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRI 96

Query: 367 REGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKIS 426
                    I     +    +       +   A     L               L +   
Sbjct: 97  TREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLS------------HRLVATDV 144

Query: 427 RSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAA 486
           + T    +       S  ++  + P+     T  +      +                  
Sbjct: 145 KGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQF------------------ 186

Query: 487 VNCVDFVDDGKYFLTGGADQIVKIC 511
              VD  + G    TG  +  V+I 
Sbjct: 187 ATSVDISERG-LIATGFNNGTVQIS 210

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 63.3 bits (152), Expect = 2e-11
 Identities = 33/349 (9%), Positives = 84/349 (24%), Gaps = 32/349 (9%)

Query: 89  YNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDI 148
           ++P++  +       + F+ D++  + L +        I  ++   +    F   ++   
Sbjct: 10  FSPLDGDLIAFVSRGQAFIQDVSGTYVLKVP---EPLRIRYVRRGGDTKVAFIHGTREGD 66

Query: 149 RIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAH 208
            +               N+     +            ND F             +I  + 
Sbjct: 67  FLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSR 126

Query: 209 NRGVTALAITQDGTRLLSGGGEGQVRIWKLTRES-------QSLQCVLKEHTSSVSVIQI 261
              +T   I+ +   +  G             ++                  S       
Sbjct: 127 EAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAF 186

Query: 262 KSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCS-------- 313
            +DSK     S        D           + S        P                 
Sbjct: 187 DADSKNLYYLSYRSLDPSPDR--VVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEA 244

Query: 314 --------TNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWM 365
                     +            +     S +   +     +   Y+       ++  + 
Sbjct: 245 GEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYD 304

Query: 366 YREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDD 414
            +             ++T +++S D+K ++    DG I+ +   + ED+
Sbjct: 305 VKTRKV----TEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDE 349

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 61.8 bits (148), Expect = 5e-11
 Identities = 27/354 (7%), Positives = 71/354 (20%), Gaps = 46/354 (12%)

Query: 172 IVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEG 231
           I F   G+A +   +  ++                     +  +    D       G   
Sbjct: 18  IAFVSRGQAFIQDVSGTYVLKVP-------------EPLRIRYVRRGGDTKVAFIHGTRE 64

Query: 232 QVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIM 291
              +      +   +   +   +  ++   ++     ++        +        +I  
Sbjct: 65  GDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIER 124

Query: 292 ILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSI--------IRSLEGSDVAAVNCV 343
              +MI       +   +      K  +       +I              ++ +     
Sbjct: 125 SREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAP 184

Query: 344 DFVDDGKYFLTGGADQIVKMWMYREGVPCFVGI-------GHAASITKIKISPDKKVIVS 396
            F  D K         +            F  +           S    K+ P      +
Sbjct: 185 AFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEA 244

Query: 397 VSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQL 456
              D          +  D GD R +    S                      +       
Sbjct: 245 GEYDLNDMYKRSSPINVDPGDYRMIIPLESSILI-------------YSVPVHGEFAAYY 291

Query: 457 ITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKI 510
                  ++  ++     +           +  +    D K  +    D  +  
Sbjct: 292 QGAPEKGVLLKYDVKTRKVTEVKNN-----LTDLRLSADRKTVMVRKDDGKIYT 340

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 62.3 bits (149), Expect = 3e-11
 Identities = 51/308 (16%), Positives = 96/308 (31%), Gaps = 29/308 (9%)

Query: 208 HNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKE 267
           HN+ +TAL+ + DG  L S   EG +  W +     S +     H + ++ I+  S    
Sbjct: 11  HNKAITALSSSADGKTLFSADAEGHINSWDI-STGISNRVFPDVHATMITGIKTTSKGDL 69

Query: 268 AMSASTDGTCVLWDLIKSTRLIIMIL---PSMIMSAAYHPSEVQLITCSTNKMIDYWETC 324
              +  D   V+            +     S  +  A        +      +  Y    
Sbjct: 70  FTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGK 129

Query: 325 DGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITK 384
              +  S   S VA  N   FV  G         ++    +    V     I H A IT 
Sbjct: 130 LTEVPISYNSSCVALSNDKQFVAVGGQD-----SKVHVYKLSGASVSEVKTIVHPAEITS 184

Query: 385 IKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMI 444
           +  S +   +V+      +  ++                    +   +         + +
Sbjct: 185 VAFSNNGAFLVATDQSRKVIPYSVA-----------------NNFELAHTNSWTFHTAKV 227

Query: 445 MSAAYHPSEVQLITCSTNKMIDYWETCDGS--IIRSLEGSDVAAVNCVDFVDDGKYFLTG 502
              ++ P  V+L T S +  +  W     S   I       +++VN V +  +    ++ 
Sbjct: 228 ACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIW-LNETTIVSA 286

Query: 503 GADQIVKI 510
           G D  +K 
Sbjct: 287 GQDSNIKF 294

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 56.1 bits (133), Expect = 3e-09
 Identities = 37/298 (12%), Positives = 88/298 (29%), Gaps = 19/298 (6%)

Query: 171 CIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGE 230
            +  + DGK + S   +G I  +   +G    + P+ H   +T +  T     L +   +
Sbjct: 17  ALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSK-GDLFTVSWD 75

Query: 231 GQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLII 290
             +++             +    SS  +    S   +   A+      ++   K T + I
Sbjct: 76  DHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPI 135

Query: 291 MILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGK 350
               S +  +            S   +          +   +  +++ +V   +      
Sbjct: 136 SYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLV 195

Query: 351 YFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPE 410
                       +    E         H A +  +  SPD   + + S D  + +W    
Sbjct: 196 ATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVW---- 251

Query: 411 LEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYW 468
              ++         I  + A S            +++    +E  +++   +  I +W
Sbjct: 252 ---NMNKPSDHPIIIKGAHAMS-----------SVNSVIWLNETTIVSAGQDSNIKFW 295

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 43.4 bits (100), Expect = 3e-05
 Identities = 14/76 (18%), Positives = 28/76 (36%), Gaps = 1/76 (1%)

Query: 165 MNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLK-FIIPNAHNRGVTALAITQDGTR 223
                AC+ ++ D   + +G  D  +  +          II  AH        I  + T 
Sbjct: 223 HTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETT 282

Query: 224 LLSGGGEGQVRIWKLT 239
           ++S G +  ++ W + 
Sbjct: 283 IVSAGQDSNIKFWNVP 298

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 42.3 bits (97), Expect = 9e-05
 Identities = 16/118 (13%), Positives = 30/118 (25%)

Query: 165 MNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRL 224
             +                                        H   V  ++ + D  RL
Sbjct: 180 AEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRL 239

Query: 225 LSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDL 282
            +G  +  V +W + + S     +   H  S     I  +    +SA  D     W++
Sbjct: 240 ATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNV 297

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 38.0 bits (86), Expect = 0.002
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 377 GHAASITKIKISPDKKVIVSVSADGGIFLW 406
           GH  +IT +  S D K + S  A+G I  W
Sbjct: 10  GHNKAITALSSSADGKTLFSADAEGHINSW 39

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 61.3 bits (147), Expect = 7e-11
 Identities = 39/347 (11%), Positives = 85/347 (24%), Gaps = 43/347 (12%)

Query: 174 FTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLL-SGGGEGQ 232
                + ++       +      S  +          G     +  D           G 
Sbjct: 4   LKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGD 63

Query: 233 VRIWKLTRESQ----SLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRL 288
           +    L         +L  V  E   S+    I  D KE  +       +    +     
Sbjct: 64  IYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPR 123

Query: 289 IIMILPSM-----IMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCV 343
           + +   +       +     P +V L+  + +  + Y    D   +    G    A+   
Sbjct: 124 LEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSL-YVAGPDIYKMDVKTGKYTVALPLR 182

Query: 344 DFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGI 403
           ++   G       A  ++  W ++     F  +         +   DK+   +     G 
Sbjct: 183 NWNRKGYS-----APDVLYFWPHQSPRHEFSMLYT-----IARFKDDKQDPATADLLYGY 232

Query: 404 FLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNK 463
                                    T ++       L  +  +    P +   I    N 
Sbjct: 233 LSV-------------------DLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLN- 272

Query: 464 MIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKI 510
            +  ++     +I++          CV F   G     GG    + +
Sbjct: 273 RLAKYDLKQRKLIKAANLDH--TYYCVAFDKKGDKLYLGGTFNDLAV 317

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 48.2 bits (113), Expect = 1e-06
 Identities = 18/163 (11%), Positives = 40/163 (24%), Gaps = 3/163 (1%)

Query: 75  LYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPV 134
           LY+   D     ++       + +   N + +       F          S +Y +    
Sbjct: 158 LYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFK 217

Query: 135 NFSSVFATCSK-NDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCF 193
           +     AT           ++T     +                            +  +
Sbjct: 218 DDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKY 277

Query: 194 TPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIW 236
             +  KL       H      +A  + G +L  GG    + ++
Sbjct: 278 DLKQRKLIKAANLDH--TYYCVAFDKKGDKLYLGGTFNDLAVF 318

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 47.8 bits (112), Expect = 2e-06
 Identities = 38/315 (12%), Positives = 81/315 (25%), Gaps = 48/315 (15%)

Query: 72  VTALYLLKDDSGISSLQYNPVNNKVFV-GTVNCEIFLIDMNSGFTLTLVNTCHTSA---- 126
           V    ++ D  G  +    P N   +V      +I+ ID+++       N          
Sbjct: 30  VYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGR 89

Query: 127 -------------IYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMIC--AC 171
                        +Y    P    +         + ++S     E   +    M      
Sbjct: 90  SMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYL 149

Query: 172 IVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEG 231
           +    DG   ++G +   +   T +      +     NR   +           S   E 
Sbjct: 150 MRAADDGSLYVAGPDIYKMDVKTGKY--TVALPLRNWNRKGYSAPDVLYFWPHQSPRHE- 206

Query: 232 QVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIM 291
                                +   ++ + K D ++  +A      +  DL         
Sbjct: 207 --------------------FSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQE 246

Query: 292 IL--PSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDG 349
                 +  +    P +   I    N  +  ++     +I++          CV F   G
Sbjct: 247 FADLTELYFTGLRSPKDPNQIYGVLN-RLAKYDLKQRKLIKAANLDH--TYYCVAFDKKG 303

Query: 350 KYFLTGGADQIVKMW 364
                GG    + ++
Sbjct: 304 DKLYLGGTFNDLAVF 318

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 46.3 bits (108), Expect = 5e-06
 Identities = 15/129 (11%), Positives = 37/129 (28%), Gaps = 3/129 (2%)

Query: 90  NPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIR 149
                      +      +D+ +G T T      T   +         +       N + 
Sbjct: 217 KDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQ-IYGVLNRLA 275

Query: 150 IWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGK-LKFIIPNAH 208
            + ++    +   ++ +    C+ F   G  +  G     +  F P + + +K I     
Sbjct: 276 KYDLKQRKLIKAANLDHTYY-CVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPGG 334

Query: 209 NRGVTALAI 217
           +   T   +
Sbjct: 335 DMSTTTPQV 343

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 44.0 bits (102), Expect = 3e-05
 Identities = 16/219 (7%), Positives = 56/219 (25%), Gaps = 13/219 (5%)

Query: 64  DVSLYSAGVTALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCH 123
           D  +       ++   D      ++  P+  +V++     +  L           V T  
Sbjct: 115 DHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGK 174

Query: 124 TSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILS 183
            +       P+   +     + + +  W  ++          +M+     F  D +   +
Sbjct: 175 YTV----ALPLRNWNRKGYSAPDVLYFWPHQSPRH-----EFSMLYTIARFKDDKQDPAT 225

Query: 184 GWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQ 243
                       ++GK                  +      + G    ++  +   ++ +
Sbjct: 226 ADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVL-NRLAKYD-LKQRK 283

Query: 244 SLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDL 282
            ++        +   +       +     T     +++ 
Sbjct: 284 LIKAA--NLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNP 320

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 41.3 bits (95), Expect = 2e-04
 Identities = 23/232 (9%), Positives = 49/232 (21%), Gaps = 22/232 (9%)

Query: 301 AYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFL-TGGADQ 359
           A       +I  +    +   +    ++ +S    D           D +          
Sbjct: 3   ALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYG 62

Query: 360 IVKMW------MYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELED 413
            +                  V      S+    ISPD K + +           +     
Sbjct: 63  DIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPP 122

Query: 414 --DVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETC 471
             +V  +          T    R + ++  +   S      ++  +   T K        
Sbjct: 123 RLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLR 182

Query: 472 DGS-------------IIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKI 510
           + +               +S             F DD +   T         
Sbjct: 183 NWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLS 234

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 58.0 bits (138), Expect = 7e-10
 Identities = 34/323 (10%), Positives = 89/323 (27%), Gaps = 28/323 (8%)

Query: 112 SGFTLTLVNTCHTSAIYDLQFPVNFS---SVFATCSKNDIRIWSVRTLNELLRISVM--- 165
           S  +L  +     S   +    +++    +  A        +  +   +  +   V    
Sbjct: 1   SSISLKEIIPPQPSTQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTG 60

Query: 166 --NMICACIVF--TYDGKAILSGWNDGFIRCFTPQSGKLKFII-------PNAHNRGVTA 214
             + +   + F      + + SG   G +  +     K    +              ++ 
Sbjct: 61  HGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISD 120

Query: 215 LAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTD 274
           ++   +G RL   G         ++ +S +    +  H+  ++   +K           D
Sbjct: 121 ISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGD 180

Query: 275 GTCVLWDLIKSTRLIIMILPSM--------IMSAAYHPSEVQLITCSTNKMIDYWETCDG 326
              V++      +                 +  +      V  +           ++ + 
Sbjct: 181 DGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEF 240

Query: 327 SIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREG--VPCFVGIGHAASITK 384
                 +   V          D + F T GAD  +++W       V  +          +
Sbjct: 241 LKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQ 300

Query: 385 IKISPDK-KVIVSVSADGGIFLW 406
           + +       I+S+S DG +  +
Sbjct: 301 VGVVATGNGRIISLSLDGTLNFY 323

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 51.1 bits (120), Expect = 2e-07
 Identities = 38/337 (11%), Positives = 78/337 (23%), Gaps = 39/337 (11%)

Query: 197 SGKLKFII---PNAHNRGVTALAITQDGTRLLSGGGEG-QVRIWKLTRESQSLQCVLKEH 252
           S  LK II   P+      T L+       +    G+   VR                 H
Sbjct: 2   SISLKEIIPPQPSTQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGH 61

Query: 253 -TSSVSVIQI--KSDSKEAMSASTDGT---------CVLWDLIKSTRLIIMILPSMIMSA 300
            +S V+ ++      S+   S    G               +  + +    +L   I   
Sbjct: 62  GSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDI 121

Query: 301 AYHPSEVQLITCSTNKM--IDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGAD 358
           ++     +L      +     +     G+ +  + G       C          +T G D
Sbjct: 122 SWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDD 181

Query: 359 QIVKMWM---YREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDV 415
             V  +    ++            + +  ++ SPD    V              +  +  
Sbjct: 182 GSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEF- 240

Query: 416 GDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSI 475
                                        + A       +  T   +  I  W+      
Sbjct: 241 ---------------LKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKC 285

Query: 476 IRSLEG-SDVAAVNCVDFV-DDGKYFLTGGADQIVKI 510
           ++             V  V       ++   D  +  
Sbjct: 286 VQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNF 322

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.0 bits (99), Expect = 5e-05
 Identities = 11/67 (16%), Positives = 25/67 (37%), Gaps = 5/67 (7%)

Query: 219 QDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIK---SDSKEAMSASTDG 275
            D  +  + G +  +R+W +   +             +   Q+    + +   +S S DG
Sbjct: 261 LDSQKFATVGADATIRVWDV--TTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDG 318

Query: 276 TCVLWDL 282
           T   ++L
Sbjct: 319 TLNFYEL 325

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 55.2 bits (131), Expect = 7e-09
 Identities = 29/332 (8%), Positives = 73/332 (21%), Gaps = 32/332 (9%)

Query: 181 ILSGWNDGFIRCFTPQSGKLKFIIP-NAHNRGVTALAITQDGTRLL-SGGGEGQVRIWKL 238
           IL+      +     +   +  +I             +   G     +      +    L
Sbjct: 4   ILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDL 63

Query: 239 TRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIM 298
                            +S  + +  S    + S DG  +                    
Sbjct: 64  VTGETL-------GRIDLSTPEERVKSLFGAALSPDGKTLAI------------------ 98

Query: 299 SAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGAD 358
                              +  ++    S  ++ E      +  + +  DG      G D
Sbjct: 99  -YESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPR--QITMLAWARDGSKLYGLGRD 155

Query: 359 QIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDS 418
             V        V         A                 S       +T  +  D    +
Sbjct: 156 LHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPT 215

Query: 419 RSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRS 478
              +  ++         +  +    +   +   +  +        +++ ++    + I+ 
Sbjct: 216 AYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDLEKNASIKR 275

Query: 479 LEGSDVAAVNCVDFVDDGKYFLTGGADQIVKI 510
           +      +   V+   DG     GGA   +  
Sbjct: 276 VPLPH--SYYSVNVSTDGSTVWLGGALGDLAA 305

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 45.6 bits (106), Expect = 9e-06
 Identities = 23/306 (7%), Positives = 69/306 (22%), Gaps = 42/306 (13%)

Query: 140 FATCSK-NDIRIWSVRTLNELLRISVMNMIC--ACIVFTYDGK-AILSGWNDGFIRCFTP 195
               ++ + + +     +     I++ +        +    G+ A  +      +     
Sbjct: 4   ILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDL 63

Query: 196 QSGKLKFII----PNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCV--- 248
            +G+    I    P    + +   A++ DG  L       ++ +     +   +      
Sbjct: 64  VTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAE 123

Query: 249 ------LKEHTSSVSVIQIKSDSKEAMSASTD----------------------GTCVLW 280
                   E    ++++    D  +      D                       T    
Sbjct: 124 TLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQP 183

Query: 281 DLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAV 340
           D++                             +    +   +   G +            
Sbjct: 184 DVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFY 243

Query: 341 NCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSAD 400
                          GA  +++ +   +       +    S   + +S D   +    A 
Sbjct: 244 FSTAVNPAKTR--AFGAYNVLESFDLEKNASIKR-VPLPHSYYSVNVSTDGSTVWLGGAL 300

Query: 401 GGIFLW 406
           G +  +
Sbjct: 301 GDLAAY 306

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 44.8 bits (104), Expect = 1e-05
 Identities = 18/169 (10%), Positives = 46/169 (27%), Gaps = 4/169 (2%)

Query: 68  YSAGVTALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAI 127
           ++   + LY L  D  +   +   +     + +   E +             +     A 
Sbjct: 142 WARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHES-SGVMAT 200

Query: 128 YDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWND 187
                  +      T  +  +    + T  E+    V  M         +     +    
Sbjct: 201 PFYTARKDIDPADPTAYRTGLLTMDLET-GEMAMREVRIMDVFYFSTAVNPAKTRAFGAY 259

Query: 188 GFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIW 236
             +  F  +       +P        ++ ++ DG+ +  GG  G +  +
Sbjct: 260 NVLESFDLEKNASIKRVP--LPHSYYSVNVSTDGSTVWLGGALGDLAAY 306

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 52.7 bits (124), Expect = 3e-08
 Identities = 47/304 (15%), Positives = 93/304 (30%), Gaps = 31/304 (10%)

Query: 207 AHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSK 266
            HN+G+TAL +      L+SG  +G++  W       S   + ++H++ +  +      +
Sbjct: 11  GHNKGITALTVN----PLISGSYDGRIMEW-------SSSSMHQDHSNLIVSLDNSKAQE 59

Query: 267 EAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDG 326
            +            D +K   +      S    A+ +      +  + + ++        
Sbjct: 60  YSS-------ISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGD 112

Query: 327 SIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIK 386
            I      S  +AV+                + I    +    V   +     A  + I 
Sbjct: 113 IIKSVRLNSPGSAVSLSQNYVAVGLEEG---NTIQVFKLSDLEVSFDLKTPLRAKPSYIS 169

Query: 387 ISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMS 446
           ISP +  I +    G I L+     E               +   S    I   P+   +
Sbjct: 170 ISPSETYIAAGDVMGKILLYDLQSREVK---------TSRWAFRTSKINAISWKPAEKGA 220

Query: 447 AAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQ 506
                 E  + T S +  I  +       I     +    VN + +       ++ GAD 
Sbjct: 221 NEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADA 279

Query: 507 IVKI 510
            +K 
Sbjct: 280 CIKR 283

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 52.7 bits (124), Expect = 4e-08
 Identities = 31/287 (10%), Positives = 69/287 (24%), Gaps = 15/287 (5%)

Query: 123 HTSAIYDLQFPVNFSSVFATCSK-NDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAI 181
           H   I  L       +   + S    I  WS  ++++     ++      +  +   +  
Sbjct: 12  HNKGITALTV-----NPLISGSYDGRIMEWSSSSMHQDHSNLIV-----SLDNSKAQEYS 61

Query: 182 LSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRE 241
              W+D        +          + N       +T D   L+     G +        
Sbjct: 62  SISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNS 121

Query: 242 SQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAA 301
             S   + + + +            +                K + + I    + I +  
Sbjct: 122 PGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGD 181

Query: 302 YHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIV 361
                +     S       W      I               +   +     TG  D  +
Sbjct: 182 VMGKILLYDLQSREVKTSRWAFRTSKINAISWKPA--EKGANEEEIEEDLVATGSLDTNI 239

Query: 362 KMWMYREGVPCFVGI-GHAASITKIKISPDKKVIVSVSADGGIFLWT 407
            ++  +  +     +  H   +  +        +VS  AD  I  W 
Sbjct: 240 FIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWN 285

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 50.0 bits (117), Expect = 2e-07
 Identities = 19/150 (12%), Positives = 43/150 (28%), Gaps = 1/150 (0%)

Query: 88  QYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKND 147
                  +VF  +     F +        + ++   +         +    ++   S+  
Sbjct: 137 LEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREV 196

Query: 148 IRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNA 207
                    +++  IS             +   + +G  D  I  ++ +         NA
Sbjct: 197 KTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNA 256

Query: 208 HNRGVTALAITQDGTRLLSGGGEGQVRIWK 237
           H  GV  L        L+S G +  ++ W 
Sbjct: 257 HKDGVNNLLWETPS-TLVSSGADACIKRWN 285

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 45.3 bits (105), Expect = 8e-06
 Identities = 16/122 (13%), Positives = 38/122 (31%), Gaps = 2/122 (1%)

Query: 162 ISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDG 221
           IS+             GK +L       ++         K    +       A     + 
Sbjct: 168 ISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEE 227

Query: 222 TRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWD 281
             + +G  +  + I+ + +    +   L  H   V+ +  ++ S    S+  D     W+
Sbjct: 228 DLVATGSLDTNIFIYSV-KRPMKIIKALNAHKDGVNNLLWETPSTLV-SSGADACIKRWN 285

Query: 282 LI 283
           ++
Sbjct: 286 VV 287

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.6 bits (98), Expect = 6e-05
 Identities = 39/296 (13%), Positives = 76/296 (25%), Gaps = 36/296 (12%)

Query: 81  DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVF 140
           + GI++L  NP+      G+ +  I     +S          H++ I  L          
Sbjct: 13  NKGITALTVNPL----ISGSYDGRIMEWSSSSMHQ------DHSNLIVSLDNSKAQEYSS 62

Query: 141 ATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKL 200
            +                                  DG   +   +D  +   +     +
Sbjct: 63  ISWDDTLKVNGI--------TKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDII 114

Query: 201 KFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQ 260
           K +  N+        A++     +  G  EG         + +    +     +  S I 
Sbjct: 115 KSVRLNSP-----GSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYIS 169

Query: 261 IKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIM------------SAAYHPSEVQ 308
           I        +    G  +L+DL                            +      E  
Sbjct: 170 ISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDL 229

Query: 309 LITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMW 364
           + T S +  I  +       I     +    VN + +       ++ GAD  +K W
Sbjct: 230 VATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRW 284

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 46.9 bits (110), Expect = 4e-06
 Identities = 40/326 (12%), Positives = 86/326 (26%), Gaps = 21/326 (6%)

Query: 172 IVFTYDGKAIL--SGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGG 229
            +   D   +   +  + G I      S K+  +I       V    ++  G  LL  G 
Sbjct: 24  QLNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVID--TGYAVHISRMSASGRYLLVIGR 81

Query: 230 EGQVRIW-KLTRESQSLQCV--LKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKST 286
           + ++ +     +E   +  +    E  S  S      + +  ++ +           ++ 
Sbjct: 82  DARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETL 141

Query: 287 RL--IIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVD 344
               I+      + +  YHP        ++++  ++      +    L          V 
Sbjct: 142 EPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVT 201

Query: 345 FVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSA----- 399
            +    +   GG D   + +M        V +  +       +    K            
Sbjct: 202 SIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVH 261

Query: 400 DGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITC 459
                +W+   L D          K     A      +       +    HP    L   
Sbjct: 262 PKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYV- 320

Query: 460 STNKMIDYWETCDGSIIRSLEGSDVA 485
                 D     D  I +S+   D+ 
Sbjct: 321 ------DTTFNPDARISQSVAVFDLK 340

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} Length = 441

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

 Score = 39.1 bits (91), Expect = 0.001
 Identities = 35/311 (11%), Positives = 78/311 (25%), Gaps = 65/311 (20%)

Query: 146 NDIRIWSVRTLNELLRISVMNMICA------------------------------CIVFT 175
            ++R+  V ++ EL+RI V N+  A                                   
Sbjct: 21  GEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGR 80

Query: 176 YDGK-AILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVR 234
           YDGK   ++   +  +        K   I    + + +  L + +               
Sbjct: 81  YDGKYLFINDKANTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNY--------- 131

Query: 235 IWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP 294
                        V       +       D  +    ++       D         +I+ 
Sbjct: 132 -------------VFCNAEFVIPQPN---DGTDFSLDNSYTMFTAIDAETMDVAWQVIVD 175

Query: 295 SMIMSAAYHPS-EVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFL 353
             + +     + +    TC  ++          +    +   +V        V  G +  
Sbjct: 176 GNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVER--IAAAVKAGNFKT 233

Query: 354 TGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPD-KKVIVSVSADGGIFLW---TFP 409
            G +   V           ++ +        +  SPD K  I +      + +       
Sbjct: 234 IGDSKVPVVDGRGESEFTRYIPVPKNPH--GLNTSPDGKYFIANGKLSPTVSVIAIDKLD 291

Query: 410 ELEDDVGDSRS 420
           +L +D  + R 
Sbjct: 292 DLFEDKIELRD 302

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	515
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	100.0
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	100.0
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	100.0
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	100.0
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	100.0
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	100.0
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	100.0
d1tbga_	340	beta1-subunit of the signal-transducing G protein	100.0
d1tbga_	340	beta1-subunit of the signal-transducing G protein	100.0
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	100.0
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	100.0
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	100.0
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	100.0
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	100.0
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	100.0
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	100.0
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	100.0
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	100.0
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	100.0
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	100.0
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	100.0
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	100.0
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	100.0
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	100.0
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.98
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.97
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.96
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.95
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.94
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.94
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.94
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.94
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.92
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.91
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.9
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.88
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.87
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.87
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.81
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	99.78
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.77
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.74
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	99.72
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.72
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	99.49
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	99.48
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	99.43
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	99.43
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	99.41
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	99.38
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	99.36
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	99.35
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	99.35
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	99.35
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	99.34
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	99.33
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	99.29
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	99.28
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	99.25
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	99.2
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	99.01
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	98.98
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	98.81
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	98.77
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	98.75
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	98.75
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	98.74
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	98.7
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	98.69
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	98.65
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	98.64
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	98.51
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	98.46
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	98.38
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	98.36
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	98.34
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	98.31
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	98.29
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	98.25
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	98.13
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	98.1
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	98.05
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	98.04
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	98.0
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	97.72
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	97.67
d1h6la_	353	Thermostable phytase (3-phytase) {Bacillus amyloli	97.17
d2hu7a1	313	Acylamino-acid-releasing enzyme, N-terminal donain	97.15
d1v04a_	340	Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory	97.07
d1h6la_	353	Thermostable phytase (3-phytase) {Bacillus amyloli	96.83
d1xipa_	381	Nucleoporin NUP159 {Baker's yeast (Saccharomyces c	96.01
d2hu7a1	313	Acylamino-acid-releasing enzyme, N-terminal donain	95.73
d1zgka1	288	Kelch-like ECH-associated protein 1, KEAP1 {Human	95.21
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	94.61
d1zgka1	288	Kelch-like ECH-associated protein 1, KEAP1 {Human	94.13
d1xipa_	381	Nucleoporin NUP159 {Baker's yeast (Saccharomyces c	93.94
d1v04a_	340	Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory	93.16
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	92.96
d1wp5a_	323	Topoisomerase IV subunit A, ParC, C-terminal domai	89.54
d1tl2a_	235	Tachylectin-2 {Japanese horseshoe crab (Tachypleus	84.62
d1wp5a_	323	Topoisomerase IV subunit A, ParC, C-terminal domai	82.62
d1jtdb_	273	beta-lactamase inhibitor protein-II, BLIP-II {Stre	80.51

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-44  Score=325.13  Aligned_cols=289  Identities=16%  Similarity=0.251  Sum_probs=257.5

Q ss_pred             ceEEEEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCce----eEEeeccCccCeEEEEeCCCCcEEEEEecCC
Q psy17610         71 GVTALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFT----LTLVNTCHTSAIYDLQFPVNFSSVFATCSKN  146 (515)
Q Consensus        71 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~----~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~  146 (515)
                      ....+..++|...|+|++|+|+|++||+|+ ||.|+|||+.++..    ......+|.+.|.+++|+|++++|++++.|+
T Consensus        41 ~~~~~~~~~H~~~V~~v~fs~~g~~latg~-dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~dg  119 (337)
T d1gxra_          41 HARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEAS  119 (337)
T ss_dssp             EEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSS
T ss_pred             CceEEEECCCCCcEEEEEECCCCCEEEEEE-CCEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcCCCCEEEEeeccc
Confidence            346677779999999999999999999987 78999999976432    2223457999999999999999999999999


Q ss_pred             cEEEEeCCCC--ceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEE
Q psy17610        147 DIRIWSVRTL--NELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRL  224 (515)
Q Consensus       147 ~i~iw~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  224 (515)
                      .|++||+...  +....+..|...+.+++|+|++.++++++.++.+++|++.+++..... ..|...|.+++|++++..+
T Consensus       120 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~~~~~-~~~~~~v~~l~~s~~~~~~  198 (337)
T d1gxra_         120 TLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF-QGHTDGASCIDISNDGTKL  198 (337)
T ss_dssp             EEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE-CCCSSCEEEEEECTTSSEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccc
Confidence            9999998754  455667788899999999999999999999999999999999988777 6899999999999999999


Q ss_pred             EEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcC
Q psy17610        225 LSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHP  304 (515)
Q Consensus       225 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  304 (515)
                      ++++.|+.+++||++..  ..... ..|...|.+++|+|+++++++++.|+.+++||+++++......+...+.+++|+|
T Consensus       199 ~~~~~d~~v~i~d~~~~--~~~~~-~~~~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~i~~v~~s~  275 (337)
T d1gxra_         199 WTGGLDNTVRSWDLREG--RQLQQ-HDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAY  275 (337)
T ss_dssp             EEEETTSEEEEEETTTT--EEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECT
T ss_pred             ccccccccccccccccc--eeecc-cccccceEEEEEcccccccceeccccccccccccccccccccccccccceEEECC
Confidence            99999999999999643  33333 3578899999999999999999999999999999998888777888999999999


Q ss_pred             CCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEc
Q psy17610        305 SEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMY  366 (515)
Q Consensus       305 ~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~  366 (515)
                      ++++|++++.|+.|++||+.+++.+..+...  ..|.+++|+|++++|++|+.||.|+|||+
T Consensus       276 ~g~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~--~~v~~~~~s~d~~~l~t~s~D~~I~vWdl  335 (337)
T d1gxra_         276 CGKWFVSTGKDNLLNAWRTPYGASIFQSKES--SSVLSCDISVDDKYIVTGSGDKKATVYEV  335 (337)
T ss_dssp             TSSEEEEEETTSEEEEEETTTCCEEEEEECS--SCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred             CCCEEEEEeCCCeEEEEECCCCCEEEEccCC--CCEEEEEEeCCCCEEEEEeCCCeEEEEEE
Confidence            9999999999999999999999998887643  78999999999999999999999999996

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=7.4e-45  Score=327.47  Aligned_cols=307  Identities=20%  Similarity=0.309  Sum_probs=273.2

Q ss_pred             EEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCC
Q psy17610         75 LYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVR  154 (515)
Q Consensus        75 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~  154 (515)
                      ..+.+|.++|++++|+|++++||+|+.||+|++||+++++. ...+.+|...|.+++|+|++..++++..++.+.+|+..
T Consensus        11 ~~L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~-~~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (317)
T d1vyhc1          11 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF-ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ   89 (317)
T ss_dssp             CEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCC-CEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT
T ss_pred             EEEcCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCE-EEEEeCCCCcEEEEeeeccccccccccccccccccccc
Confidence            35779999999999999999999999999999999999654 45667899999999999999999999999999999999


Q ss_pred             CCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEE
Q psy17610        155 TLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVR  234 (515)
Q Consensus       155 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~  234 (515)
                      ..+....+..+...+.++.|+|+++.+++++.|+.+++||+++++....+ ..|...+.+++|+|++.+|++++.|+.|+
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~d~~v~  168 (317)
T d1vyhc1          90 GFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWVRMVRPNQDGTLIASCSNDQTVR  168 (317)
T ss_dssp             SSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEE-ECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred             ccccccccccccccceeeeccCCCceEEeeccCcceeEeecccceeeeEE-ccCCCcceeeecccCCCEEEEEeCCCeEE
Confidence            98888888889999999999999999999999999999999999988887 68999999999999999999999999999


Q ss_pred             EEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEEC
Q psy17610        235 IWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCST  314 (515)
Q Consensus       235 iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  314 (515)
                      +|+..  .......+.+|...+..+.++|++.........+...                     ......+..+++++.
T Consensus       169 ~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~  225 (317)
T d1vyhc1         169 VWVVA--TKECKAELREHRHVVECISWAPESSYSSISEATGSET---------------------KKSGKPGPFLLSGSR  225 (317)
T ss_dssp             EEETT--TCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC----------------------------CCEEEEEET
T ss_pred             EEeec--cceeeEEEecCCCCceEEEEeeccccceeecccccee---------------------eeeccCCceeEeccC
Confidence            99995  4556677888999999999999876543333222211                     223345778899999


Q ss_pred             CCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEE
Q psy17610        315 NKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVI  394 (515)
Q Consensus       315 ~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l  394 (515)
                      |+.|++||.++++++..+..+. ..+.+++++|++++|++|+.||.|++||+++++++..+.+|..+|++++|+|++++|
T Consensus       226 d~~i~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~V~~~~~s~~~~~l  304 (317)
T d1vyhc1         226 DKTIKMWDVSTGMCLMTLVGHD-NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV  304 (317)
T ss_dssp             TSEEEEEETTTTEEEEEEECCS-SCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCE
T ss_pred             CCEEEEEECCCCcEEEEEeCCC-CCEEEEEECCCCCEEEEEECCCeEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEE
Confidence            9999999999999999999876 899999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEeCCCcEEEEe
Q psy17610        395 VSVSADGGIFLWT  407 (515)
Q Consensus       395 ~~~~~dg~i~iw~  407 (515)
                      ++++.||+|++||
T Consensus       305 ~s~s~Dg~i~iWd  317 (317)
T d1vyhc1         305 VTGSVDQTVKVWE  317 (317)
T ss_dssp             EEEETTSEEEEEC
T ss_pred             EEEeCCCeEEEeC
Confidence            9999999999997

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-44  Score=327.87  Aligned_cols=280  Identities=20%  Similarity=0.307  Sum_probs=250.2

Q ss_pred             cCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCce---eEEE--EecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecC
Q psy17610        122 CHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNE---LLRI--SVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQ  196 (515)
Q Consensus       122 ~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~---~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~  196 (515)
                      .|...|.+++|+|+|++|++++ |+.|+|||+.+++.   +...  ..|...|.+++|+|++++|++++.||.|++||+.
T Consensus        49 ~H~~~V~~v~fs~~g~~latg~-dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~dg~i~iwd~~  127 (337)
T d1gxra_          49 NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLA  127 (337)
T ss_dssp             CCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECC
T ss_pred             CCCCcEEEEEECCCCCEEEEEE-CCEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcCCCCEEEEeeccccccccccc
Confidence            5999999999999999998876 89999999986543   2222  3678899999999999999999999999999987


Q ss_pred             CCc--eEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCC
Q psy17610        197 SGK--LKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTD  274 (515)
Q Consensus       197 ~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  274 (515)
                      ...  ....+ ..|...+..++|+|++.++++++.|+.|++|++.  ..........|...|.+++|++++..+++++.|
T Consensus       128 ~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~--~~~~~~~~~~~~~~v~~l~~s~~~~~~~~~~~d  204 (337)
T d1gxra_         128 APTPRIKAEL-TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH--NQTLVRQFQGHTDGASCIDISNDGTKLWTGGLD  204 (337)
T ss_dssp             CC--EEEEEE-ECSSSCEEEEEECTTSSEEEEEETTSCEEEEETT--TTEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             cccccccccc-cccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccccccccccc
Confidence            543  34444 5789999999999999999999999999999995  445666778899999999999999999999999


Q ss_pred             CcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEE
Q psy17610        275 GTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLT  354 (515)
Q Consensus       275 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~  354 (515)
                      +.+++||+++++.+..+.+...+.+++|+|+++.+++++.++.+++||+++++.... ..+ ...|.+++|+|++++|++
T Consensus       205 ~~v~i~d~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~-~~~i~~v~~s~~g~~l~s  282 (337)
T d1gxra_         205 NTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQL-HLH-ESCVLSLKFAYCGKWFVS  282 (337)
T ss_dssp             SEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEE-CCC-SSCEEEEEECTTSSEEEE
T ss_pred             ccccccccccceeecccccccceEEEEEcccccccceeccccccccccccccccccc-ccc-ccccceEEECCCCCEEEE
Confidence            999999999999999999999999999999999999999999999999998887543 333 388999999999999999


Q ss_pred             EcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeC
Q psy17610        355 GGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTF  408 (515)
Q Consensus       355 ~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~  408 (515)
                      ++.||.|++||+.+++.+..+ .|...|.+++|+|++++|++++.||.|++||+
T Consensus       283 ~s~Dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~s~d~~~l~t~s~D~~I~vWdl  335 (337)
T d1gxra_         283 TGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGDKKATVYEV  335 (337)
T ss_dssp             EETTSEEEEEETTTCCEEEEE-ECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred             EeCCCeEEEEECCCCCEEEEc-cCCCCEEEEEEeCCCCEEEEEeCCCeEEEEEE
Confidence            999999999999999888775 57889999999999999999999999999986

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.6e-43  Score=328.55  Aligned_cols=322  Identities=19%  Similarity=0.280  Sum_probs=253.7

Q ss_pred             cccccccccCcceeeeccceEEEEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEe-------------
Q psy17610         53 VSTKLKDVNAEDVSLYSAGVTALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLV-------------  119 (515)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~-------------  119 (515)
                      ......+|+....+.+.  .......+|.+.|+|++|||+|++||+|+ |+.|++||+.+++.+...             
T Consensus        36 ~~~~~~~~~~~~~~~~~--~~l~~~~~H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~  112 (388)
T d1erja_          36 TNDYYILYNPALPREID--VELHKSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENL  112 (388)
T ss_dssp             CSSCEEEECTTSCCCEE--EEEEEEEECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------
T ss_pred             CCCcEEEeCCCCCccee--eeeEeeCCCCCcEEEEEECCCCCEEEEEe-CCeEEEEEecccceEeeeccccccccccccc
Confidence            33444556654433322  23445568999999999999999999986 889999999987554432             


Q ss_pred             ----eccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEec
Q psy17610        120 ----NTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTP  195 (515)
Q Consensus       120 ----~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~  195 (515)
                          ..+|...|.+++|+|++++|++++.|+.|++||...++.+..+.+|...|.++.+++++..+++++.++.+++||.
T Consensus       113 ~~~~~~~~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~  192 (388)
T d1erja_         113 NTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDL  192 (388)
T ss_dssp             ------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred             ccccccCCCCCEEEEEECCCCCcceecccccccccccccccccccccccccccccccccccccccccccccceeeeeeec
Confidence                2246778999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCceEEEecCCCCCCeEEEEEcC-CCCEEEEecCCCcEEEEEccCCceee-----EEeeccccCceEEEEEecCCCEEE
Q psy17610        196 QSGKLKFIIPNAHNRGVTALAITQ-DGTRLLSGGGEGQVRIWKLTRESQSL-----QCVLKEHTSSVSVIQIKSDSKEAM  269 (515)
Q Consensus       196 ~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~  269 (515)
                      .+....... ..+ ....++.+.+ ++++|++++.|+.|++|+........     .....+|...|.+++|+|++++|+
T Consensus       193 ~~~~~~~~~-~~~-~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~  270 (388)
T d1erja_         193 RTGQCSLTL-SIE-DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVV  270 (388)
T ss_dssp             TTTEEEEEE-ECS-SCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEE
T ss_pred             ccccccccc-ccc-cccccccccCCCCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEECCCCCEEE
Confidence            998877765 334 4455555555 88999999999999999996443221     122346889999999999999999


Q ss_pred             EEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCC
Q psy17610        270 SASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDG  349 (515)
Q Consensus       270 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~  349 (515)
                      +++.|+.|++||+.++..........                             .+........+. ..+.+++|+|++
T Consensus       271 s~~~d~~i~iwd~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~-~~v~~~~~s~~~  320 (388)
T d1erja_         271 SGSLDRSVKLWNLQNANNKSDSKTPN-----------------------------SGTCEVTYIGHK-DFVLSVATTQND  320 (388)
T ss_dssp             EEETTSEEEEEEC--------------------------------------------CEEEEEECCS-SCEEEEEECGGG
T ss_pred             EEECCCcEEEEeccCCcccccccccc-----------------------------ccceeeeccccc-ceEEEEEECCCC
Confidence            99999999999997765443222111                             112223333333 789999999999


Q ss_pred             CEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEE------CCCCcEEEEEeCCCcEEEEeCC
Q psy17610        350 KYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKI------SPDKKVIVSVSADGGIFLWTFP  409 (515)
Q Consensus       350 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~------~~~~~~l~~~~~dg~i~iw~~~  409 (515)
                      ++|++|+.||.|++||+++++++..+.+|.+.|+++++      +|++++|++++.||+|++|+++
T Consensus       321 ~~l~sg~~dg~i~vwd~~~~~~~~~l~~H~~~V~~~~~~~~~~~spd~~~l~s~s~Dg~I~iW~~~  386 (388)
T d1erja_         321 EYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK  386 (388)
T ss_dssp             CEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred             CEEEEEeCCCEEEEEECCCCcEEEEEeCCCCCEEEEEEecCcccCCCCCEEEEEeCCCEEEEEeee
Confidence            99999999999999999999999999999999999975      5789999999999999999974

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=1.2e-42  Score=310.71  Aligned_cols=283  Identities=15%  Similarity=0.203  Sum_probs=245.6

Q ss_pred             CCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCcee
Q psy17610         80 DDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNEL  159 (515)
Q Consensus        80 ~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~  159 (515)
                      +.+.+.+++++|+|+.||.+. ++.|.+|+++++ .....+.+|.+.|++++|+|+|++|++++.|++|+|||+.+++..
T Consensus        16 ~r~~~~~~a~~~~g~~l~~~~-~~~v~i~~~~~~-~~~~~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~~~   93 (311)
T d1nr0a1          16 ARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSL-TDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHI   93 (311)
T ss_dssp             CTTCCCCCEECTTSSEEEEEE-TTEEEEEETTCS-SCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCC
T ss_pred             CCCCeEEEEEcCCCCEEEEEe-CCEEEEEECCCC-ceeEEEcCCCCCEEEEEEeCCCCeEeccccCceEeeeeeeccccc
Confidence            456778899999999999985 557999999985 455566789999999999999999999999999999999987754


Q ss_pred             --EEEEecCeEEEEEEEeeCCCEEEEEeC--CCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCE-EEEecCCCcEE
Q psy17610        160 --LRISVMNMICACIVFTYDGKAILSGWN--DGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTR-LLSGGGEGQVR  234 (515)
Q Consensus       160 --~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~  234 (515)
                        ..+..|..+|.+++|+|++++|++++.  +..+++|++++++....+ .+|...|++++|+|++++ |++|+.|+.|+
T Consensus        94 ~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~~~~l-~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~  172 (311)
T d1nr0a1          94 LKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNL-TGQARAMNSVDFKPSRPFRIISGSDDNTVA  172 (311)
T ss_dssp             EEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCC-CCCSSCEEEEEECSSSSCEEEEEETTSCEE
T ss_pred             cccccccccCccccccccccccccccccccccccccccccccccccccc-cccccccccccccccceeeecccccccccc
Confidence              457788999999999999999999886  456999999999888777 689999999999998875 78899999999


Q ss_pred             EEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEc--------CccEEEEEEcCCC
Q psy17610        235 IWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMIL--------PSMIMSAAYHPSE  306 (515)
Q Consensus       235 iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~--------~~~~~~~~~~~~~  306 (515)
                      +||++  ..........|..+|.++.++|+++++++++.|+.+++||+.+++....+..        ...|.+++|+|++
T Consensus       173 i~d~~--~~~~~~~~~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~  250 (311)
T d1nr0a1         173 IFEGP--PFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDG  250 (311)
T ss_dssp             EEETT--TBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTS
T ss_pred             ccccc--ccccccccccccccccccccCccccccccccccccccccccccccccccccccccccccccccccccccCCCC
Confidence            99994  5566777889999999999999999999999999999999999888776643        3469999999999


Q ss_pred             cEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEcc
Q psy17610        307 VQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYR  367 (515)
Q Consensus       307 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~  367 (515)
                      ++|++++.|+.|++||++++++++++..+.......+.+.++++.|++++.||.|++||.+
T Consensus       251 ~~l~tgs~Dg~v~iwd~~t~~~~~~l~~~~~~~~~~~~~~~~~~~l~s~s~dG~i~~wd~d  311 (311)
T d1nr0a1         251 TKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPE  311 (311)
T ss_dssp             SEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETT
T ss_pred             CEEEEEeCCCeEEEEECCCCcEEEEEECCCCccceEEEEEecCCEEEEEECCCEEEEEeCC
Confidence            9999999999999999999999999987654333444555556789999999999999974

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.2e-41  Score=315.92  Aligned_cols=320  Identities=19%  Similarity=0.307  Sum_probs=255.9

Q ss_pred             EEEeCCCeEEEEecCCCceEE----EecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeE-----------
Q psy17610        182 LSGWNDGFIRCFTPQSGKLKF----IIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQ-----------  246 (515)
Q Consensus       182 ~~~~~dg~i~~~~~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~-----------  246 (515)
                      +....++...+|+....+...    .. .+|.+.|++++|+|+|++|++|+ |+.|++||+.+......           
T Consensus        32 ~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~~  109 (388)
T d1erja_          32 LKKQTNDYYILYNPALPREIDVELHKS-LDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDP  109 (388)
T ss_dssp             SEEECSSCEEEECTTSCCCEEEEEEEE-EECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC--------
T ss_pred             cccCCCCcEEEeCCCCCcceeeeeEee-CCCCCcEEEEEECCCCCEEEEEe-CCeEEEEEecccceEeeecccccccccc
Confidence            456677888899976554322    22 36999999999999999999987 89999999964332111           


Q ss_pred             -----EeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEc-CccEEEEEEcCCCcEEEEEECCCeEEE
Q psy17610        247 -----CVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMIL-PSMIMSAAYHPSEVQLITCSTNKMIDY  320 (515)
Q Consensus       247 -----~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~i~~  320 (515)
                           .....|...|.+++|+|++++|++++.||.|++||...++....... ...+.++.+++++..+++++.++.+++
T Consensus       110 ~~~~~~~~~~~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~  189 (388)
T d1erja_         110 ENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRI  189 (388)
T ss_dssp             ---------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred             cccccccccCCCCCEEEEEECCCCCcceecccccccccccccccccccccccccccccccccccccccccccccceeeee
Confidence                 12235677899999999999999999999999999999988887764 468999999999999999999999999


Q ss_pred             EeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeec-------cCCCCCeeEEEECCCCcE
Q psy17610        321 WETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVG-------IGHAASITKIKISPDKKV  393 (515)
Q Consensus       321 ~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-------~~~~~~i~~~~~~~~~~~  393 (515)
                      ||..+.........+. ..+....+.+++++|++++.||.|++|+..++.....+       .+|...|++++|+|++++
T Consensus       190 ~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~  268 (388)
T d1erja_         190 WDLRTGQCSLTLSIED-GVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQS  268 (388)
T ss_dssp             EETTTTEEEEEEECSS-CEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSE
T ss_pred             eecccccccccccccc-ccccccccCCCCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEECCCCCE
Confidence            9999988887777654 44444444558899999999999999999988766544       468899999999999999


Q ss_pred             EEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCC
Q psy17610        394 IVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDG  473 (515)
Q Consensus       394 l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~  473 (515)
                      |++++.||.|++||+............        ...........|...|.+++|+|++++|++|+.||.|++||+.++
T Consensus       269 l~s~~~d~~i~iwd~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~  340 (388)
T d1erja_         269 VVSGSLDRSVKLWNLQNANNKSDSKTP--------NSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSG  340 (388)
T ss_dssp             EEEEETTSEEEEEEC-----------------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTC
T ss_pred             EEEEECCCcEEEEeccCCccccccccc--------cccceeeecccccceEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence            999999999999999866432211111        011222334557788999999999999999999999999999999


Q ss_pred             eeeeeecccccceEEEEEE------cCCCcEEEEeecCCeEEEEEE
Q psy17610        474 SIIRSLEGSDVAAVNCVDF------VDDGKYFLTGGADQIVKICLY  513 (515)
Q Consensus       474 ~~~~~~~~~~~~~v~~~~~------s~~~~~l~s~~~dg~v~iw~~  513 (515)
                      +++.++.+|. +.|.++++      +|++++|+||+.||+|+||++
T Consensus       341 ~~~~~l~~H~-~~V~~~~~~~~~~~spd~~~l~s~s~Dg~I~iW~~  385 (388)
T d1erja_         341 NPLLMLQGHR-NSVISVAVANGSSLGPEYNVFATGSGDCKARIWKY  385 (388)
T ss_dssp             CEEEEEECCS-SCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEE
T ss_pred             cEEEEEeCCC-CCEEEEEEecCcccCCCCCEEEEEeCCCEEEEEee
Confidence            9999999997 89999874      679999999999999999997

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=7.2e-43  Score=314.34  Aligned_cols=307  Identities=17%  Similarity=0.282  Sum_probs=264.9

Q ss_pred             EEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecC
Q psy17610        117 TLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQ  196 (515)
Q Consensus       117 ~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~  196 (515)
                      ...+.||.++|++++|+|++++|++++.|++|+|||+++++.+..+.+|...|.+++|+|++.+++++..++.+..|+..
T Consensus        10 ~~~L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (317)
T d1vyhc1          10 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ   89 (317)
T ss_dssp             SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT
T ss_pred             cEEEcCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCcEEEEeeeccccccccccccccccccccc
Confidence            44678999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCc
Q psy17610        197 SGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGT  276 (515)
Q Consensus       197 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~  276 (515)
                      ..+....+ ..|...+.++.++|+++.+++++.|+.+++||++  .......+.+|...+.++++++++.++++++.|+.
T Consensus        90 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~  166 (317)
T d1vyhc1          90 GFECIRTM-HGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQ--TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT  166 (317)
T ss_dssp             SSCEEECC-CCCSSCEEEEEECSSSSEEEEEETTSEEEEEETT--TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred             cccccccc-ccccccceeeeccCCCceEEeeccCcceeEeecc--cceeeeEEccCCCcceeeecccCCCEEEEEeCCCe
Confidence            88877776 6899999999999999999999999999999995  44566778889999999999999999999999999


Q ss_pred             EEEEEcccceEEEEEEcC-ccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEE
Q psy17610        277 CVLWDLIKSTRLIIMILP-SMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTG  355 (515)
Q Consensus       277 i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~  355 (515)
                      +++|++.+++....+... ..+..+.++|+.........                       ...........+.+++++
T Consensus       167 v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~  223 (317)
T d1vyhc1         167 VRVWVVATKECKAELREHRHVVECISWAPESSYSSISEA-----------------------TGSETKKSGKPGPFLLSG  223 (317)
T ss_dssp             EEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGC-----------------------CSCC-------CCEEEEE
T ss_pred             EEEEeeccceeeEEEecCCCCceEEEEeeccccceeecc-----------------------ccceeeeeccCCceeEec
Confidence            999999998888777543 46888888887543322111                       111223344567889999


Q ss_pred             cCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccce
Q psy17610        356 GADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRL  435 (515)
Q Consensus       356 ~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  435 (515)
                      +.|+.|++||+++++++..+.+|...|.+++|+|++++|++++.||.|++||+.+.+.                    ..
T Consensus       224 ~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~--------------------~~  283 (317)
T d1vyhc1         224 SRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC--------------------MK  283 (317)
T ss_dssp             ETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCC--------------------CE
T ss_pred             cCCCEEEEEECCCCcEEEEEeCCCCCEEEEEECCCCCEEEEEECCCeEEEEECCCCcE--------------------EE
Confidence            9999999999999999999999999999999999999999999999999999876431                    12


Q ss_pred             eeecCcccEEEeeeccCCcEEEEeecCCeEEEEe
Q psy17610        436 IIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWE  469 (515)
Q Consensus       436 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd  469 (515)
                      .+..|...|++++|+|++++|++|+.||+|++||
T Consensus       284 ~~~~h~~~V~~~~~s~~~~~l~s~s~Dg~i~iWd  317 (317)
T d1vyhc1         284 TLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE  317 (317)
T ss_dssp             EEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred             EEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEeC
Confidence            2345778899999999999999999999999997

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=1e-42  Score=311.00  Aligned_cols=289  Identities=16%  Similarity=0.176  Sum_probs=237.9

Q ss_pred             EEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEE
Q psy17610        168 ICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQC  247 (515)
Q Consensus       168 ~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~  247 (515)
                      ....++++|+|+.|+.+. ++.+.+|++++++....+ .+|...|++++|+|+|++|++|+.||.|++||+.........
T Consensus        19 ~~~~~a~~~~g~~l~~~~-~~~v~i~~~~~~~~~~~~-~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~~~~~~   96 (311)
T d1nr0a1          19 TAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIY-TEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKT   96 (311)
T ss_dssp             CCCCCEECTTSSEEEEEE-TTEEEEEETTCSSCCEEE-CCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEE
T ss_pred             CeEEEEEcCCCCEEEEEe-CCEEEEEECCCCceeEEE-cCCCCCEEEEEEeCCCCeEeccccCceEeeeeeecccccccc
Confidence            456789999999999875 567999999998888777 689999999999999999999999999999999876666666


Q ss_pred             eeccccCceEEEEEecCCCEEEEEeCC--CcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCC
Q psy17610        248 VLKEHTSSVSVIQIKSDSKEAMSASTD--GTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCD  325 (515)
Q Consensus       248 ~~~~~~~~v~~~~~~~~~~~l~~~~~d--~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~  325 (515)
                      .+..|..+|.+++|+|+++++++++.+  ..+++|+++++                                        
T Consensus        97 ~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~----------------------------------------  136 (311)
T d1nr0a1          97 TIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTG----------------------------------------  136 (311)
T ss_dssp             EEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTC----------------------------------------
T ss_pred             ccccccCccccccccccccccccccccccccccccccccc----------------------------------------
Confidence            788899999999999999999888764  44666665543                                        


Q ss_pred             CceEEEEecCCCccEEEEEEcCCCCE-EEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEE
Q psy17610        326 GSIIRSLEGSDVAAVNCVDFVDDGKY-FLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIF  404 (515)
Q Consensus       326 ~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~  404 (515)
                       +....+..+. ..|.+++|+|++++ +++|+.|+.|++||+++++....+..|..+|++++|+|++++|++++.|+.++
T Consensus       137 -~~~~~l~~h~-~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~~~~~~~~~~~~i~~v~~~p~~~~l~~~~~d~~v~  214 (311)
T d1nr0a1         137 -TSNGNLTGQA-RAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIV  214 (311)
T ss_dssp             -CBCBCCCCCS-SCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred             -cccccccccc-cccccccccccceeeecccccccccccccccccccccccccccccccccccCcccccccccccccccc
Confidence             3333333444 78999999999885 78899999999999999999999999999999999999999999999999999


Q ss_pred             EEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeeccccc
Q psy17610        405 LWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDV  484 (515)
Q Consensus       405 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~  484 (515)
                      +||+.........             ........+|...|.+++|+|++++|++|+.||.|+|||+.++++++++..+..
T Consensus       215 ~~d~~~~~~~~~~-------------~~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~iwd~~t~~~~~~l~~~~~  281 (311)
T d1nr0a1         215 LYNGVDGTKTGVF-------------EDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTR  281 (311)
T ss_dssp             EEETTTCCEEEEC-------------BCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSS
T ss_pred             ccccccccccccc-------------cccccccccccccccccccCCCCCEEEEEeCCCeEEEEECCCCcEEEEEECCCC
Confidence            9998765421110             111223345778899999999999999999999999999999999999887653


Q ss_pred             ceEEEEEEcCCCcEEEEeecCCeEEEEEE
Q psy17610        485 AAVNCVDFVDDGKYFLTGGADQIVKICLY  513 (515)
Q Consensus       485 ~~v~~~~~s~~~~~l~s~~~dg~v~iw~~  513 (515)
                      .....+.+.+++++|++++.||.|++||.
T Consensus       282 ~~~~~~~~~~~~~~l~s~s~dG~i~~wd~  310 (311)
T d1nr0a1         282 IEDQQLGIIWTKQALVSISANGFINFVNP  310 (311)
T ss_dssp             GGGCEEEEEECSSCEEEEETTCCEEEEET
T ss_pred             ccceEEEEEecCCEEEEEECCCEEEEEeC
Confidence            23333344445667999999999999983

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=5.6e-41  Score=307.12  Aligned_cols=323  Identities=16%  Similarity=0.271  Sum_probs=255.4

Q ss_pred             eEEEEecCeEE-EEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEE
Q psy17610        159 LLRISVMNMIC-ACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWK  237 (515)
Q Consensus       159 ~~~~~~~~~~v-~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~  237 (515)
                      ..++++|...| +|+  ++++++|++|+.||.|++||+.+++.+..+ .+|..+|.+++|+|+ .+|++|+.|+.|++|+
T Consensus         5 ~~tL~GH~~~vitc~--~~~~~~l~tgs~Dg~i~vWd~~~~~~~~~l-~~H~~~V~~l~~s~~-~~l~s~s~D~~i~iw~   80 (355)
T d1nexb2           5 RTTLRGHMTSVITCL--QFEDNYVITGADDKMIRVYDSINKKFLLQL-SGHDGGVWALKYAHG-GILVSGSTDRTVRVWD   80 (355)
T ss_dssp             EEEEECCSSSCEEEE--EEETTEEEEEETTTEEEEEETTTTEEEEEE-ECCSSCEEEEEEETT-TEEEEEETTCCEEEEE
T ss_pred             cEEECCcCCCcEEEE--EECCCEEEEEeCCCeEEEEECCCCcEEEEE-ECCCCCEEEEEEcCC-CEEEEEeccccccccc
Confidence            45688998875 554  557889999999999999999999999988 699999999999985 5899999999999999


Q ss_pred             ccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC----------------------c
Q psy17610        238 LTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP----------------------S  295 (515)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~----------------------~  295 (515)
                      ..............+........+.+++..+++++.|+.|++||+++..........                      .
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (355)
T d1nexb2          81 IKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGH  160 (355)
T ss_dssp             TTTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECC
T ss_pred             ccccccccccccccccccccccccccccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeeeeec
Confidence            975544444444444455566777889999999999999999999876544332111                      0


Q ss_pred             cEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeec
Q psy17610        296 MIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVG  375 (515)
Q Consensus       296 ~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~  375 (515)
                      ......+.++++.++.+..++.+++||+.+++.+.....+. ..+.++.++|+++++++++.|+.|++||.+++..+..+
T Consensus       161 ~~~v~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~  239 (355)
T d1nexb2         161 MASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHT-DRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTL  239 (355)
T ss_dssp             SSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCS-SCEEEEEEETTTTEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred             cccccccccccceeeeecccceeeeeecccccceeeeeccc-cccccccccccceeeecccccceEEeeecccccccccc
Confidence            11223455678899999999999999999999988887766 78889999999999999999999999999999999999


Q ss_pred             cCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEe-eeccCCc
Q psy17610        376 IGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSA-AYHPSEV  454 (515)
Q Consensus       376 ~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~s~~~~  454 (515)
                      .+|...|.++++++  ++|++++.||.|++||+......                      ...|...+..+ .++++++
T Consensus       240 ~~h~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~  295 (355)
T d1nexb2         240 QGHTALVGLLRLSD--KFLVSAAADGSIRGWDANDYSRK----------------------FSYHHTNLSAITTFYVSDN  295 (355)
T ss_dssp             CCCSSCCCEEEECS--SEEEEECTTSEEEEEETTTCCEE----------------------EEEECTTCCCCCEEEECSS
T ss_pred             cccccccccccccc--ceeeeeeccccccccccccccee----------------------cccccCCceEEEEEcCCCC
Confidence            99999999999975  68999999999999998754311                      11122334443 5677777


Q ss_pred             EEEEeecCCeEEEEecCCCeeeee-ecccccceEEEEEEcCCCcEEEEeecCCeEEEEEE
Q psy17610        455 QLITCSTNKMIDYWETCDGSIIRS-LEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLY  513 (515)
Q Consensus       455 ~l~~~~~dg~v~iwd~~~~~~~~~-~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~  513 (515)
                      ++++| .||.|++||+++++++.. +.+|. .+|.+++|+|+ .++++++.||.++||.+
T Consensus       296 ~l~~g-~d~~i~vwd~~tg~~~~~~~~~~~-~~V~~v~~~~~-~~~~~~s~dg~~~l~~~  352 (355)
T d1nexb2         296 ILVSG-SENQFNIYNLRSGKLVHANILKDA-DQIWSVNFKGK-TLVAAVEKDGQSFLEIL  352 (355)
T ss_dssp             EEEEE-ETTEEEEEETTTCCBCCSCTTTTC-SEEEEEEEETT-EEEEEEESSSCEEEEEE
T ss_pred             EEEEE-eCCEEEEEECCCCCEEEEEecCCC-CCEEEEEEcCC-eEEEEEECCCcEEEEEE
Confidence            77666 489999999999998865 45555 89999999987 57888999998666543

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.8e-40  Score=301.94  Aligned_cols=291  Identities=19%  Similarity=0.284  Sum_probs=251.3

Q ss_pred             ceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEE
Q psy17610        199 KLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCV  278 (515)
Q Consensus       199 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~  278 (515)
                      +...++ .+|.++|++++|+|++++|++|+.||.|++||+.  +......+..|..+|.+++|+|++.++++++.|+.++
T Consensus        46 ~~~~tL-~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~--~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i~  122 (340)
T d1tbga_          46 RTRRTL-RGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSY--TTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICS  122 (340)
T ss_dssp             CEEEEE-CCCSSCEEEEEECTTSSEEEEEETTTEEEEEETT--TTEEEEEEECSCSCEEEEEECTTSSEEEEEETTCCEE
T ss_pred             eeeEEE-CCCCCCEEEEEECCCCCEEEEEECCCceeeeecc--cceeEEEEecccccEEeeEeeccceeeeeecccceee
Confidence            344555 7999999999999999999999999999999995  4566777889999999999999999999999999999


Q ss_pred             EEEcccce----EEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEE
Q psy17610        279 LWDLIKST----RLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLT  354 (515)
Q Consensus       279 iwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~  354 (515)
                      +|+.....    ....+..+...........+..+.....+.....+............... ..+....+.+.+.++++
T Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  201 (340)
T d1tbga_         123 IYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHT-GDVMSLSLAPDTRLFVS  201 (340)
T ss_dssp             EEESSSSCSCCCEEEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCS-SCEEEEEECTTSSEEEE
T ss_pred             cccccccccccccceecccccccccccccccccccccccccccccccccccccccccccccc-eeEeeeccccccceeEE
Confidence            99976542    34444444555555556667778888899999999988877777766665 78889999999999999


Q ss_pred             EcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccc
Q psy17610        355 GGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTR  434 (515)
Q Consensus       355 ~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~  434 (515)
                      ++.|+.|++||+++++++..+.+|...|++++|+|++++|++++.|+.+++|++.......                  .
T Consensus       202 ~~~d~~v~i~d~~~~~~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~------------------~  263 (340)
T d1tbga_         202 GACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELM------------------T  263 (340)
T ss_dssp             EETTTEEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE------------------E
T ss_pred             eecCceEEEEECCCCcEEEEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeeccccccc------------------c
Confidence            9999999999999999999999999999999999999999999999999999987643110                  1


Q ss_pred             eeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEEEEE
Q psy17610        435 LIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICL  512 (515)
Q Consensus       435 ~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~  512 (515)
                      .....+...+.+++|+|++++|++|+.||.|++||+.+++++..+.+|. .+|++++|+|++++|++|+.||+|+|||
T Consensus       264 ~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~H~-~~V~~l~~s~d~~~l~s~s~Dg~v~iWd  340 (340)
T d1tbga_         264 YSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHD-NRVSCLGVTDDGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             ECCTTCCSCEEEEEECSSSCEEEEEETTSCEEEEETTTCCEEEEECCCS-SCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             cccccccCceEEEEECCCCCEEEEEECCCEEEEEECCCCcEEEEEcCCC-CCEEEEEEeCCCCEEEEEccCCEEEEeC
Confidence            1112344568999999999999999999999999999999999999997 8999999999999999999999999997

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=3.1e-39  Score=293.78  Aligned_cols=289  Identities=15%  Similarity=0.267  Sum_probs=254.2

Q ss_pred             eeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEe
Q psy17610        115 TLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFT  194 (515)
Q Consensus       115 ~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~  194 (515)
                      ...+++.||.++|++++|+|++++|++++.||+|+|||+.+++.+..+..|..+|.+++|+|+++++++++.|+.+.+|+
T Consensus        46 ~~~~tL~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i~~~~  125 (340)
T d1tbga_          46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN  125 (340)
T ss_dssp             CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEEECSCSCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred             eeeEEECCCCCCEEEEEECCCCCEEEEEECCCceeeeecccceeEEEEecccccEEeeEeeccceeeeeecccceeeccc
Confidence            45667899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCc----eEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEE
Q psy17610        195 PQSGK----LKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMS  270 (515)
Q Consensus       195 ~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  270 (515)
                      .....    ....+ .+|........... +..+.....+.....+...  ..........+...+....+.+.+.++++
T Consensus       126 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (340)
T d1tbga_         126 LKTREGNVRVSREL-AGHTGYLSCCRFLD-DNQIVTSSGDTTCALWDIE--TGQQTTTFTGHTGDVMSLSLAPDTRLFVS  201 (340)
T ss_dssp             SSSSCSCCCEEEEE-CCCSSCEEEEEEEE-TTEEEEEETTTEEEEEETT--TTEEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred             ccccccccccceec-cccccccccccccc-ccccccccccccccccccc--cccccccccccceeEeeeccccccceeEE
Confidence            76543    33344 56776666555554 4567778888888888874  33444455667788999999999999999


Q ss_pred             EeCCCcEEEEEcccceEEEEEEc-CccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEec-CCCccEEEEEEcCC
Q psy17610        271 ASTDGTCVLWDLIKSTRLIIMIL-PSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEG-SDVAAVNCVDFVDD  348 (515)
Q Consensus       271 ~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~i~~~~~~~~  348 (515)
                      ++.|+.|++||+++++....+.. ...+.+++|+|+++++++++.|+.+++||+...+....+.. .+...+.+++|+|+
T Consensus       202 ~~~d~~v~i~d~~~~~~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~  281 (340)
T d1tbga_         202 GACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKS  281 (340)
T ss_dssp             EETTTEEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECSS
T ss_pred             eecCceEEEEECCCCcEEEEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeecccccccccccccccCceEEEEECCC
Confidence            99999999999999999888765 45899999999999999999999999999999988877653 33367999999999


Q ss_pred             CCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEe
Q psy17610        349 GKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWT  407 (515)
Q Consensus       349 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~  407 (515)
                      +++|++|+.||.|++||+.+++++..+.+|..+|++++|+|++++|++++.||.|++||
T Consensus       282 ~~~l~~g~~dg~i~iwd~~~~~~~~~~~~H~~~V~~l~~s~d~~~l~s~s~Dg~v~iWd  340 (340)
T d1tbga_         282 GRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             SCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             CCEEEEEECCCEEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEccCCEEEEeC
Confidence            99999999999999999999999999999999999999999999999999999999997

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=2.1e-40  Score=304.75  Aligned_cols=288  Identities=14%  Similarity=0.193  Sum_probs=238.0

Q ss_pred             CccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCc--eeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCce
Q psy17610        123 HTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLN--ELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKL  200 (515)
Q Consensus       123 h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~  200 (515)
                      +.++|+|++|+|++++|++++.|+.|+|||+++++  .+..+.+|..+|.+++|+|++++|++++.|+.|++||+.++..
T Consensus         6 ~~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~   85 (371)
T d1k8kc_           6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTW   85 (371)
T ss_dssp             CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEE
T ss_pred             CCCCeEEEEECCCCCEEEEEeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeeccccc
Confidence            45789999999999999999999999999998765  5677889999999999999999999999999999999988765


Q ss_pred             EEEe-cCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCce--eeEEeeccccCceEEEEEecCCCEEEEEeCCCcE
Q psy17610        201 KFII-PNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQ--SLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTC  277 (515)
Q Consensus       201 ~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i  277 (515)
                      .... ...|...|.+++|+|+++.|++++.|+.+++|++.....  ........|...|.+++|+|++++|++++.|+++
T Consensus        86 ~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~v  165 (371)
T d1k8kc_          86 KPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKC  165 (371)
T ss_dssp             EEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCE
T ss_pred             ccccccccccccccccccccccccceeecccCcceeeeeecccccccccccccccccccccccccccccceeccccCcEE
Confidence            4333 257889999999999999999999999999999865443  2344566789999999999999999999999999


Q ss_pred             EEEEcccce------------------EEEEE-EcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCc
Q psy17610        278 VLWDLIKST------------------RLIIM-ILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVA  338 (515)
Q Consensus       278 ~iwd~~~~~------------------~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~  338 (515)
                      ++|+.....                  ..... .+...+.+++|+|+++++++++.|+.|++||+.+++.+..+..+. .
T Consensus       166 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~  244 (371)
T d1k8kc_         166 RIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASET-L  244 (371)
T ss_dssp             EEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSS-C
T ss_pred             EEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeecccccccccccCCcceEEeeecccceeeeeccc-c
Confidence            999975421                  22222 234568999999999999999999999999999999999998876 8


Q ss_pred             cEEEEEEcCCCCEEEEEcCCCeEEEEEccC--Ceeee---------------------------------------eccC
Q psy17610        339 AVNCVDFVDDGKYFLTGGADQIVKMWMYRE--GVPCF---------------------------------------VGIG  377 (515)
Q Consensus       339 ~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~--~~~~~---------------------------------------~~~~  377 (515)
                      ++.+++|+|++++|++|. |+.+++|....  +....                                       ....
T Consensus       245 ~v~s~~fs~d~~~la~g~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (371)
T d1k8kc_         245 PLLAVTFITESSLVAAGH-DCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSL  323 (371)
T ss_dssp             CEEEEEEEETTEEEEEET-TSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSS
T ss_pred             cceeeeecCCCCEEEEEc-CCceEEEEeeCCCceEEEeeeecCccccccccccceeeEecccceeEEeccccccceeccc
Confidence            899999999998888766 66666665432  11100                                       0013


Q ss_pred             CCCCeeEEEECCCC----cEEEEEeCCCcEEEEeCCCCc
Q psy17610        378 HAASITKIKISPDK----KVIVSVSADGGIFLWTFPELE  412 (515)
Q Consensus       378 ~~~~i~~~~~~~~~----~~l~~~~~dg~i~iw~~~~~~  412 (515)
                      |.+.|+++++.+.+    ..++|++.||.|++||++..+
T Consensus       324 H~~~I~~i~~~~~~~~~~~~~~T~g~Dg~v~iW~~~~~~  362 (371)
T d1k8kc_         324 HKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE  362 (371)
T ss_dssp             SSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHH
T ss_pred             ccCCEEEEEEeCCCCcceEEEEEEcCCCeEEEEeCCcCh
Confidence            88899999997744    468999999999999986543

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=2e-40  Score=304.94  Aligned_cols=305  Identities=13%  Similarity=0.146  Sum_probs=239.9

Q ss_pred             cCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCce--EEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCc
Q psy17610        165 MNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKL--KFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRES  242 (515)
Q Consensus       165 ~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~  242 (515)
                      ...+|+|++|+|++++|++++.|+.|++||.++++.  ...+ .+|..+|.+++|+|++++|++++.|+.|++||+....
T Consensus         6 ~~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l-~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~   84 (371)
T d1k8kc_           6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHEL-KEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRT   84 (371)
T ss_dssp             CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEE-ECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTE
T ss_pred             CCCCeEEEEECCCCCEEEEEeCCCEEEEEECCCCCEEEEEEe-cCCCCCEEEEEECCCCCEEEEEECCCeEEEEeecccc
Confidence            346799999999999999999999999999988763  4444 6899999999999999999999999999999998666


Q ss_pred             eeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEE-----EcCccEEEEEEcCCCcEEEEEECCCe
Q psy17610        243 QSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIM-----ILPSMIMSAAYHPSEVQLITCSTNKM  317 (515)
Q Consensus       243 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~  317 (515)
                      ......+.+|...|.+++|+|+++.+++++.|+++++|++.........     .+...+.+++|+|++++|++++.|+.
T Consensus        85 ~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~  164 (371)
T d1k8kc_          85 WKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFK  164 (371)
T ss_dssp             EEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSC
T ss_pred             cccccccccccccccccccccccccceeecccCcceeeeeecccccccccccccccccccccccccccccceeccccCcE
Confidence            6667777889999999999999999999999999999998765432222     13457999999999999999999999


Q ss_pred             EEEEeCCCCc------------------eEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCC
Q psy17610        318 IDYWETCDGS------------------IIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHA  379 (515)
Q Consensus       318 i~~~d~~~~~------------------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~  379 (515)
                      +++|+.....                  .+.....+. ..+.+++|+|++++|++++.|+.|++||+.+++.+..+..|.
T Consensus       165 v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~  243 (371)
T d1k8kc_         165 CRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSC-GWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASET  243 (371)
T ss_dssp             EEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCS-SCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSS
T ss_pred             EEEEeeccCccccccccccccccccceeeeeeccCcc-CcEEEEEeecccccccccccCCcceEEeeecccceeeeeccc
Confidence            9999976432                  334444443 789999999999999999999999999999999999999999


Q ss_pred             CCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcc--cceee-------------------ecccccccceeee
Q psy17610        380 ASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRS--LSSKI-------------------SRSTARSTRLIIM  438 (515)
Q Consensus       380 ~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~--~~~~~-------------------~~~~~~~~~~~~~  438 (515)
                      .+|.+++|+|++++|++| .|+.+++|..............  .....                   .............
T Consensus       244 ~~v~s~~fs~d~~~la~g-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (371)
T d1k8kc_         244 LPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDS  322 (371)
T ss_dssp             CCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSS
T ss_pred             ccceeeeecCCCCEEEEE-cCCceEEEEeeCCCceEEEeeeecCccccccccccceeeEecccceeEEeccccccceecc
Confidence            999999999999888765 5777777665433211110000  00000                   0000011111223


Q ss_pred             cCcccEEEeeeccCC----cEEEEeecCCeEEEEecCC
Q psy17610        439 ILPSMIMSAAYHPSE----VQLITCSTNKMIDYWETCD  472 (515)
Q Consensus       439 ~~~~~i~~~~~s~~~----~~l~~~~~dg~v~iwd~~~  472 (515)
                      .|.+.|+++++.|.+    ..+++++.||.|++||+++
T Consensus       323 ~H~~~I~~i~~~~~~~~~~~~~~T~g~Dg~v~iW~~~~  360 (371)
T d1k8kc_         323 LHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRS  360 (371)
T ss_dssp             SSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHH
T ss_pred             cccCCEEEEEEeCCCCcceEEEEEEcCCCeEEEEeCCc
Confidence            478889999998765    3689999999999999865

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=8.6e-40  Score=291.78  Aligned_cols=293  Identities=14%  Similarity=0.170  Sum_probs=236.2

Q ss_pred             CceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEE
Q psy17610        156 LNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRI  235 (515)
Q Consensus       156 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i  235 (515)
                      |+..+.+.+|...|++++|+|++++|++|+.||.|++||+++++....+...|...|++++|+|++++ ++++.|+.+++
T Consensus         2 g~~~~~~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~g~~-~~~~~d~~v~~   80 (299)
T d1nr0a2           2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDL-FTVSWDDHLKV   80 (299)
T ss_dssp             TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCE-EEEETTTEEEE
T ss_pred             CccceEcCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCCcEEEEEeecccee-ecccceeeEEE
Confidence            56678889999999999999999999999999999999999999998887789999999999999875 55667899999


Q ss_pred             EEccCCce-eeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEEC
Q psy17610        236 WKLTRESQ-SLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCST  314 (515)
Q Consensus       236 w~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  314 (515)
                      |+...... ........+...+..++++++++.+++++ ++.+.+|+...   .........+.+++++|+++++++++.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~-~~~i~~~~~~~---~~~~~~~~~~~~~~~s~~~~~l~~g~~  156 (299)
T d1nr0a2          81 VPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAAC-YKHIAIYSHGK---LTEVPISYNSSCVALSNDKQFVAVGGQ  156 (299)
T ss_dssp             ECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEE-SSEEEEEETTE---EEEEECSSCEEEEEECTTSCEEEEEET
T ss_pred             eccCCccccccccccccccccccccccccccccccccc-ccccccccccc---ccccccccccccccccccccccccccc
Confidence            99864322 12223345677889999999998776665 56899998543   333455667889999999999999999


Q ss_pred             CCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeee---eeccCCCCCeeEEEECCCC
Q psy17610        315 NKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPC---FVGIGHAASITKIKISPDK  391 (515)
Q Consensus       315 ~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~~~i~~~~~~~~~  391 (515)
                      ++.+++||+++++........+...|.+++|+|++++|++++.|+.|++||+.++...   ..+.+|...|++++|+|++
T Consensus       157 dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~  236 (299)
T d1nr0a2         157 DSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDN  236 (299)
T ss_dssp             TSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9999999998887665444344488999999999999999999999999999887554   3456789999999999999


Q ss_pred             cEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecC
Q psy17610        392 KVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETC  471 (515)
Q Consensus       392 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~  471 (515)
                      ++|++++.||.|++||+........                 ......+...+..+. ++++++|++++.||.|++||+.
T Consensus       237 ~~l~sgs~dg~i~iwd~~~~~~~~~-----------------~~~~~~~~~~v~~~~-~~~~~~l~s~s~D~~i~iWdl~  298 (299)
T d1nr0a2         237 VRLATGSLDNSVIVWNMNKPSDHPI-----------------IIKGAHAMSSVNSVI-WLNETTIVSAGQDSNIKFWNVP  298 (299)
T ss_dssp             SEEEEEETTSCEEEEETTCTTSCCE-----------------EETTSSTTSCEEEEE-EEETTEEEEEETTSCEEEEECC
T ss_pred             cceEEEcCCCEEEEEECCCCCcceE-----------------EEecCCCCCcEEEEE-ECCCCEEEEEeCCCEEEEEecc
Confidence            9999999999999999876532110                 000111223455554 4667899999999999999974

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=3.9e-39  Score=294.76  Aligned_cols=320  Identities=18%  Similarity=0.253  Sum_probs=254.2

Q ss_pred             EEEEecCCCcE-EEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEe
Q psy17610         74 ALYLLKDDSGI-SSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWS  152 (515)
Q Consensus        74 ~~~~~~~~~~v-~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~  152 (515)
                      +..+.+|...| +|++|  ++++||+|+.||+|++||+.++ +....+.+|.++|.+++|+|+ ..|++++.|++|++|+
T Consensus         5 ~~tL~GH~~~vitc~~~--~~~~l~tgs~Dg~i~vWd~~~~-~~~~~l~~H~~~V~~l~~s~~-~~l~s~s~D~~i~iw~   80 (355)
T d1nexb2           5 RTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINK-KFLLQLSGHDGGVWALKYAHG-GILVSGSTDRTVRVWD   80 (355)
T ss_dssp             EEEEECCSSSCEEEEEE--ETTEEEEEETTTEEEEEETTTT-EEEEEEECCSSCEEEEEEETT-TEEEEEETTCCEEEEE
T ss_pred             cEEECCcCCCcEEEEEE--CCCEEEEEeCCCeEEEEECCCC-cEEEEEECCCCCEEEEEEcCC-CEEEEEeccccccccc
Confidence            45678998875 66655  5889999999999999999996 455567889999999999997 4899999999999999


Q ss_pred             CCCCceeEEEEecC--eEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEec----------------------CCC
Q psy17610        153 VRTLNELLRISVMN--MICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIP----------------------NAH  208 (515)
Q Consensus       153 ~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~----------------------~~~  208 (515)
                      +...+.........  .......+.+++.++++++.|+.|++||+.++.......                      ..|
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (355)
T d1nexb2          81 IKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGH  160 (355)
T ss_dssp             TTTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECC
T ss_pred             ccccccccccccccccccccccccccccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeeeeec
Confidence            99887776655333  345667778899999999999999999998765433221                      122


Q ss_pred             CCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEE
Q psy17610        209 NRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRL  288 (515)
Q Consensus       209 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~  288 (515)
                      ...+.  .+.++++.++++..|+.+++||+.  .........++...+.++.++|++..+++++.|+.|++||++++..+
T Consensus       161 ~~~v~--~~~~~~~~~~~~~~d~~i~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~  236 (355)
T d1nexb2         161 MASVR--TVSGHGNIVVSGSYDNTLIVWDVA--QMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELM  236 (355)
T ss_dssp             SSCEE--EEEEETTEEEEEETTSCEEEEETT--TTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCCEE
T ss_pred             ccccc--ccccccceeeeecccceeeeeecc--cccceeeeeccccccccccccccceeeecccccceEEeeeccccccc
Confidence            33333  345568899999999999999995  45556677788899999999999999999999999999999999988


Q ss_pred             EEEEcC-ccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEcc
Q psy17610        289 IIMILP-SMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYR  367 (515)
Q Consensus       289 ~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~  367 (515)
                      ..+..+ ..+.+++++  ++++++++.||.|++||+++..........  .......++++++++++|+ ||.|++||++
T Consensus       237 ~~~~~h~~~v~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~g~-d~~i~vwd~~  311 (355)
T d1nexb2         237 YTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYHHT--NLSAITTFYVSDNILVSGS-ENQFNIYNLR  311 (355)
T ss_dssp             EEECCCSSCCCEEEEC--SSEEEEECTTSEEEEEETTTCCEEEEEECT--TCCCCCEEEECSSEEEEEE-TTEEEEEETT
T ss_pred             cccccccccccccccc--cceeeeeecccccccccccccceecccccC--CceEEEEEcCCCCEEEEEe-CCEEEEEECC
Confidence            887654 468888876  468999999999999999988765554432  2333345677888777765 8999999999


Q ss_pred             CCeeee-eccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEe
Q psy17610        368 EGVPCF-VGIGHAASITKIKISPDKKVIVSVSADGGIFLWT  407 (515)
Q Consensus       368 ~~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~  407 (515)
                      +++++. .+.+|..+|.+++|+|+ .++++++.||.++||.
T Consensus       312 tg~~~~~~~~~~~~~V~~v~~~~~-~~~~~~s~dg~~~l~~  351 (355)
T d1nexb2         312 SGKLVHANILKDADQIWSVNFKGK-TLVAAVEKDGQSFLEI  351 (355)
T ss_dssp             TCCBCCSCTTTTCSEEEEEEEETT-EEEEEEESSSCEEEEE
T ss_pred             CCCEEEEEecCCCCCEEEEEEcCC-eEEEEEECCCcEEEEE
Confidence            998875 56789999999999987 5788889999977764

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.2e-39  Score=292.32  Aligned_cols=330  Identities=17%  Similarity=0.292  Sum_probs=265.3

Q ss_pred             EeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCC
Q psy17610        151 WSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGE  230 (515)
Q Consensus       151 w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  230 (515)
                      |+..+.++.+.+++|.+.|.+ +++++|++|++|+.||.|++||+.+++++..+ .+|...|.+++|+|+  +|++++.|
T Consensus         1 W~~~~~~~~~~l~GH~~~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~~~~~~~~~-~~h~~~V~~v~~~~~--~l~s~s~D   76 (342)
T d2ovrb2           1 WRRGELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTL-VGHTGGVWSSQMRDN--IIISGSTD   76 (342)
T ss_dssp             HHHSCCCCCEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEEC-CCCSSCEEEEEEETT--EEEEEETT
T ss_pred             CCCCCCCcCEEECCcCCceEE-EEEECCCEEEEEeCCCeEEEEECCCCCEEEEE-eCCCCCEEEEEeCCC--ccccceec
Confidence            566677888899999998865 47778999999999999999999999999888 799999999999875  89999999


Q ss_pred             CcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEE
Q psy17610        231 GQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLI  310 (515)
Q Consensus       231 ~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  310 (515)
                      +.+++|+....  ........+...+.....  ....+..+..|+.+.+|+..+++....+........ ...+....++
T Consensus        77 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  151 (342)
T d2ovrb2          77 RTLKVWNAETG--ECIHTLYGHTSTVRCMHL--HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR-CVQYDGRRVV  151 (342)
T ss_dssp             SCEEEEETTTT--EEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEE-EEEECSSCEE
T ss_pred             ccccccccccc--cceecccccceeEeeeec--ccccccccccceeEEEeecccccceeeeecccccce-eeccccceee
Confidence            99999998543  333334444555554443  456788899999999999999888777766554433 3445667888


Q ss_pred             EEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCC
Q psy17610        311 TCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPD  390 (515)
Q Consensus       311 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~  390 (515)
                      .++.++.+++||....+.+..+..+. ..+.  .+++++.++++++.||.|++||++.++++..+.+|...+.++++++ 
T Consensus       152 ~~~~d~~i~~~d~~~~~~~~~~~~~~-~~~~--~~~~~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~-  227 (342)
T d2ovrb2         152 SGAYDFMVKVWDPETETCLHTLQGHT-NRVY--SLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD-  227 (342)
T ss_dssp             EEETTSCEEEEEGGGTEEEEEECCCS-SCEE--EEEECSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEET-
T ss_pred             eecCCCeEEEeecccceeeEEEcCcc-cccc--cccCCCCEEEEEeCCCeEEEeecccceeeeEecccccceeEEecCC-
Confidence            99999999999999999988888765 4444  4555788999999999999999999999999999999999888865 


Q ss_pred             CcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEec
Q psy17610        391 KKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWET  470 (515)
Q Consensus       391 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~  470 (515)
                       ++|++++.|+.|++||+...+.....                 .....|...+.++.+  +++++++++.||.|++||+
T Consensus       228 -~~l~s~s~d~~i~iwd~~~~~~~~~~-----------------~~~~~~~~~~~~~~~--~~~~~~s~s~Dg~i~iwd~  287 (342)
T d2ovrb2         228 -NILVSGNADSTVKIWDIKTGQCLQTL-----------------QGPNKHQSAVTCLQF--NKNFVITSSDDGTVKLWDL  287 (342)
T ss_dssp             -TEEEEEETTSCEEEEETTTCCEEEEE-----------------CSTTSCSSCEEEEEE--CSSEEEEEETTSEEEEEET
T ss_pred             -CEEEEEcCCCEEEEEecccccccccc-----------------cccceeeeceeeccc--CCCeeEEEcCCCEEEEEEC
Confidence             59999999999999998765321100                 001123344555555  5679999999999999999


Q ss_pred             CCCeeeeeecc----cccceEEEEEEcCCCcEEEEeecCCe----EEEEEE
Q psy17610        471 CDGSIIRSLEG----SDVAAVNCVDFVDDGKYFLTGGADQI----VKICLY  513 (515)
Q Consensus       471 ~~~~~~~~~~~----~~~~~v~~~~~s~~~~~l~s~~~dg~----v~iw~~  513 (515)
                      +++++++.+..    .+...|++++|+|++.+|++|+.||+    |++|||
T Consensus       288 ~tg~~i~~~~~~~~~~~~~~v~~v~~s~~~~~la~g~~dGt~~~~l~~~Df  338 (342)
T d2ovrb2         288 KTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDF  338 (342)
T ss_dssp             TTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEEC
T ss_pred             CCCCEEEEEecccCCCCCCCEEEEEECCCCCEEEEEeCCCCCeeEEEEEeC
Confidence            99999887742    22378999999999999999999986    999997

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-37  Score=282.79  Aligned_cols=319  Identities=19%  Similarity=0.343  Sum_probs=257.6

Q ss_pred             EEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCC
Q psy17610         75 LYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVR  154 (515)
Q Consensus        75 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~  154 (515)
                      ..+.+|.+.|.+ +++++|++||+|+.||+|++||+.+++ +...+.+|.++|.+++|+|+  .|++++.|+.+++|+..
T Consensus        10 ~~l~GH~~~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~~~~-~~~~~~~h~~~V~~v~~~~~--~l~s~s~D~~~~~~~~~   85 (342)
T d2ovrb2          10 KVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGK-CLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAE   85 (342)
T ss_dssp             EEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCC-EEEECCCCSSCEEEEEEETT--EEEEEETTSCEEEEETT
T ss_pred             EEECCcCCceEE-EEEECCCEEEEEeCCCeEEEEECCCCC-EEEEEeCCCCCEEEEEeCCC--ccccceecccccccccc
Confidence            346789999865 466779999999999999999999965 45567889999999999986  89999999999999998


Q ss_pred             CCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEE
Q psy17610        155 TLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVR  234 (515)
Q Consensus       155 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~  234 (515)
                      ..........+...+.....  ....+..+..|+.+.+|+..+++....+. .+.....  ...+....+++++.|+.++
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~i~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~d~~i~  160 (342)
T d2ovrb2          86 TGECIHTLYGHTSTVRCMHL--HEKRVVSGSRDATLRVWDIETGQCLHVLM-GHVAAVR--CVQYDGRRVVSGAYDFMVK  160 (342)
T ss_dssp             TTEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEESSSCCEEEEEE-CCSSCEE--EEEECSSCEEEEETTSCEE
T ss_pred             cccceecccccceeEeeeec--ccccccccccceeEEEeecccccceeeee-cccccce--eeccccceeeeecCCCeEE
Confidence            87776666656655554443  45678889999999999999998877763 3333322  3344566788999999999


Q ss_pred             EEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCc-cEEEEEEcCCCcEEEEEE
Q psy17610        235 IWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPS-MIMSAAYHPSEVQLITCS  313 (515)
Q Consensus       235 iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~  313 (515)
                      +||..  .......+.+|...+..  +.+++.++++++.||.|++||++.++.+.....+. .+.++.++  ++++++++
T Consensus       161 ~~d~~--~~~~~~~~~~~~~~~~~--~~~~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~s  234 (342)
T d2ovrb2         161 VWDPE--TETCLHTLQGHTNRVYS--LQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGN  234 (342)
T ss_dssp             EEEGG--GTEEEEEECCCSSCEEE--EEECSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEEEEE
T ss_pred             Eeecc--cceeeEEEcCccccccc--ccCCCCEEEEEeCCCeEEEeecccceeeeEecccccceeEEecC--CCEEEEEc
Confidence            99994  45566677788776655  45578899999999999999999999888776554 56665554  57999999


Q ss_pred             CCCeEEEEeCCCCceEEEEecCCC--ccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeec-----cCCCCCeeEEE
Q psy17610        314 TNKMIDYWETCDGSIIRSLEGSDV--AAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVG-----IGHAASITKIK  386 (515)
Q Consensus       314 ~~~~i~~~d~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-----~~~~~~i~~~~  386 (515)
                      .|+.|++||....+....+..+..  ..+.++.+  +++++++|+.||.|++||+++++.+..+     .+|...|++++
T Consensus       235 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~s~s~Dg~i~iwd~~tg~~i~~~~~~~~~~~~~~v~~v~  312 (342)
T d2ovrb2         235 ADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF--NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIR  312 (342)
T ss_dssp             TTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEE--CSSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEE
T ss_pred             CCCEEEEEecccccccccccccceeeeceeeccc--CCCeeEEEcCCCEEEEEECCCCCEEEEEecccCCCCCCCEEEEE
Confidence            999999999999998888876543  44555555  5679999999999999999999888765     35778899999


Q ss_pred             ECCCCcEEEEEeCCCc----EEEEeCCC
Q psy17610        387 ISPDKKVIVSVSADGG----IFLWTFPE  410 (515)
Q Consensus       387 ~~~~~~~l~~~~~dg~----i~iw~~~~  410 (515)
                      |+|++.+|++|+.||+    |++||++.
T Consensus       313 ~s~~~~~la~g~~dGt~~~~l~~~Df~~  340 (342)
T d2ovrb2         313 ASNTKLVCAVGSRNGTEETKLLVLDFDV  340 (342)
T ss_dssp             ECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred             ECCCCCEEEEEeCCCCCeeEEEEEeCCC
Confidence            9999999999999985    99999864

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=2.3e-38  Score=282.45  Aligned_cols=286  Identities=13%  Similarity=0.220  Sum_probs=231.0

Q ss_pred             EEEEEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEe
Q psy17610         73 TALYLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWS  152 (515)
Q Consensus        73 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~  152 (515)
                      ....+.||.++|++++|+|++++||+|+.||.|++||+++++.+.....+|...|++++|+|++. +++++.|+.+++|+
T Consensus         4 ~~~~~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~g~-~~~~~~d~~v~~~~   82 (299)
T d1nr0a2           4 IDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGD-LFTVSWDDHLKVVP   82 (299)
T ss_dssp             EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSC-EEEEETTTEEEEEC
T ss_pred             cceEcCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCCcEEEEEeeccce-eecccceeeEEEec
Confidence            34567799999999999999999999999999999999998777666678999999999999984 67778899999999


Q ss_pred             CCCCc---eeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecC
Q psy17610        153 VRTLN---ELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGG  229 (515)
Q Consensus       153 ~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  229 (515)
                      .....   .......+...+.+++|+|+++.+++++ ++.+.+|+...  ....   .....+.+++|+|+++++++|+.
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~-~~~i~~~~~~~--~~~~---~~~~~~~~~~~s~~~~~l~~g~~  156 (299)
T d1nr0a2          83 AGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAAC-YKHIAIYSHGK--LTEV---PISYNSSCVALSNDKQFVAVGGQ  156 (299)
T ss_dssp             SSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEE-SSEEEEEETTE--EEEE---ECSSCEEEEEECTTSCEEEEEET
T ss_pred             cCCccccccccccccccccccccccccccccccccc-ccccccccccc--cccc---ccccccccccccccccccccccc
Confidence            86543   2223445677889999999998776655 56899998543  2222   23456789999999999999999


Q ss_pred             CCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEE----cCccEEEEEEcCC
Q psy17610        230 EGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMI----LPSMIMSAAYHPS  305 (515)
Q Consensus       230 d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~----~~~~~~~~~~~~~  305 (515)
                      |+.|++||++..... ......|...|.+++|+|+++++++++.|+.|++||+.++.......    +...+.+++|+|+
T Consensus       157 dg~i~~~d~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~  235 (299)
T d1nr0a2         157 DSKVHVYKLSGASVS-EVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPD  235 (299)
T ss_dssp             TSEEEEEEEETTEEE-EEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTT
T ss_pred             ccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            999999999644332 23445788999999999999999999999999999998876554332    3457999999999


Q ss_pred             CcEEEEEECCCeEEEEeCCCCceEEEE--ecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEcc
Q psy17610        306 EVQLITCSTNKMIDYWETCDGSIIRSL--EGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYR  367 (515)
Q Consensus       306 ~~~l~~~~~~~~i~~~d~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~  367 (515)
                      ++++++++.|+.|++||++++......  ..++...+.++.+ +++++|++++.|+.|++||+.
T Consensus       236 ~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~s~D~~i~iWdl~  298 (299)
T d1nr0a2         236 NVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIW-LNETTIVSAGQDSNIKFWNVP  298 (299)
T ss_dssp             SSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEE-EETTEEEEEETTSCEEEEECC
T ss_pred             ccceEEEcCCCEEEEEECCCCCcceEEEecCCCCCcEEEEEE-CCCCEEEEEeCCCEEEEEecc
Confidence            999999999999999999887544333  2344456776655 557899999999999999984

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=6.6e-35  Score=258.21  Aligned_cols=282  Identities=17%  Similarity=0.112  Sum_probs=230.8

Q ss_pred             CceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEE
Q psy17610        156 LNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRI  235 (515)
Q Consensus       156 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i  235 (515)
                      .++++++.+|..+|++++|+|    |++|+.||.|++||+.++.      ..|...|.++.+++++ .+++++.|+++++
T Consensus         3 ~~~i~~l~gH~~~I~~l~~s~----l~sgs~Dg~v~~Wd~~~~~------~~h~~~V~~~~~~~~~-~~~s~s~D~~v~~   71 (287)
T d1pgua2           3 DEVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMH------QDHSNLIVSLDNSKAQ-EYSSISWDDTLKV   71 (287)
T ss_dssp             EEEEEEECCCSSCEEEEETTT----TEEEETTSCEEETTTTEEE------CCCCSCEEEEECCSTT-CCEEEETTTEEEE
T ss_pred             cceeEEECCCCCceEEEEECc----EEEEeCCCeEEEEECCCCC------CCCCCCEEEEEecCCC-eEEEEeecccccc
Confidence            467889999999999999986    9999999999999987642      5899999999998765 5789999999999


Q ss_pred             EEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECC
Q psy17610        236 WKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTN  315 (515)
Q Consensus       236 w~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  315 (515)
                      |++...         .....+..+.+.+++..+++ +.++.+.+|+..+++....+.......  ++++++..+++++.+
T Consensus        72 w~~~~~---------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~  139 (287)
T d1pgua2          72 NGITKH---------EFGSQPKVASANNDGFTAVL-TNDDDLLILQSFTGDIIKSVRLNSPGS--AVSLSQNYVAVGLEE  139 (287)
T ss_dssp             TTEEEE---------ECSSCEEEEEECSSSEEEEE-ETTSEEEEEETTTCCEEEEEECSSCEE--EEEECSSEEEEEETT
T ss_pred             cccccc---------ccccceeeeeeccCCceEEE-eecccceeeeccceeeeeeccccceee--eeeccCcceeeeccc
Confidence            997421         12345677888888766655 456678999999999888887776654  556778888888776


Q ss_pred             C-eEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeee-eccCCCCCeeEEEECCCCcE
Q psy17610        316 K-MIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCF-VGIGHAASITKIKISPDKKV  393 (515)
Q Consensus       316 ~-~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~~i~~~~~~~~~~~  393 (515)
                      + .+++|++...+....+...+...+++++|+|++++|++|+.||.|++||+.+++... .+..|..+|.+++|+|++..
T Consensus       140 ~~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p~~~~  219 (287)
T d1pgua2         140 GNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKG  219 (287)
T ss_dssp             TSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC--
T ss_pred             cceeeeeeccccceeeeeeeccCCceeEEEeccCccccccccccccccceeecccccccccccccccccceeeecccccc
Confidence            5 799999988777777776666889999999999999999999999999999887654 46789999999999987653


Q ss_pred             EEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCC-
Q psy17610        394 IVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCD-  472 (515)
Q Consensus       394 l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~-  472 (515)
                      ..                                                    .+.+++.++++|+.|+.|++||+.+ 
T Consensus       220 ~~----------------------------------------------------~~~~~~~~l~sgs~D~~i~iw~~~~~  247 (287)
T d1pgua2         220 AN----------------------------------------------------EEEIEEDLVATGSLDTNIFIYSVKRP  247 (287)
T ss_dssp             --------------------------------------------------------CCSCCEEEEEETTSCEEEEESSCT
T ss_pred             cc----------------------------------------------------cccCCCCeeEeecCCCeEEEEECCCC
Confidence            22                                                    2345677899999999999999877 


Q ss_pred             CeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEEEEEEe
Q psy17610        473 GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICLYI  514 (515)
Q Consensus       473 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~  514 (515)
                      ++.+..+.+|. ..|++++|+|++ .|++++.||+|++|+.+
T Consensus       248 ~~~~~~~~~h~-~~V~~v~~~~~~-~l~s~g~D~~v~iW~i~  287 (287)
T d1pgua2         248 MKIIKALNAHK-DGVNNLLWETPS-TLVSSGADACIKRWNVV  287 (287)
T ss_dssp             TCCEEETTSST-TCEEEEEEEETT-EEEEEETTSCEEEEEEC
T ss_pred             CeEEEEeCCCC-CCeEEEEECCCC-EEEEEECCCeEEEEEEC
Confidence            55677777776 899999999987 58899999999999975

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.5e-34  Score=260.18  Aligned_cols=285  Identities=13%  Similarity=0.146  Sum_probs=220.2

Q ss_pred             CCcEEEEEEecCCCEEEEEecCc-eEEEEECCCCc-eeEEeeccC-ccCeEEEEeCC--CCcEEEEEecCCcEEEEeCCC
Q psy17610         81 DSGISSLQYNPVNNKVFVGTVNC-EIFLIDMNSGF-TLTLVNTCH-TSAIYDLQFPV--NFSSVFATCSKNDIRIWSVRT  155 (515)
Q Consensus        81 ~~~v~~~~~s~~~~~l~~~~~d~-~i~iw~~~~~~-~~~~~~~~h-~~~v~~~~~~~--~~~~l~~~~~d~~i~iw~~~~  155 (515)
                      .+.+++++|+|+++.||+++.+. .|+.|+..... .....+.+| ...|++++|+|  ++.+|++++.||+|+|||+..
T Consensus        17 ~~~~t~l~~~~~~~~la~~~~~~~~i~~~~~~~~~~~~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~   96 (325)
T d1pgua1          17 RNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTF   96 (325)
T ss_dssp             TTCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEE
T ss_pred             CCCeEEEEECCCCCEEEEEeCCCEEEEEEeCCCCCccceEEEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecC
Confidence            34578999999999999987553 35556654321 223344556 56899999998  567899999999999999976


Q ss_pred             CceeE--------EEEecCeEEEEEEEeeCCCEEEEEeC--CCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCE-E
Q psy17610        156 LNELL--------RISVMNMICACIVFTYDGKAILSGWN--DGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTR-L  224 (515)
Q Consensus       156 ~~~~~--------~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l  224 (515)
                      ++...        .+..+..+|.+++|+++++++++++.  ++.+.+|+.++++.+..+ .+|...|.+++|+|++.+ +
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~~  175 (325)
T d1pgua1          97 DKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEV-SGHSQRINACHLKQSRPMRS  175 (325)
T ss_dssp             EGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEEC-CSCSSCEEEEEECSSSSCEE
T ss_pred             CcceeeeecccccccccccCcEEEEEECCCCCccceeeccccceEEEEeecccccceee-eecccccccccccccccceE
Confidence            54332        24457778999999999999987764  678999999999988887 689999999999998764 6


Q ss_pred             EEecCCCcEEEEEccCCcee-eEEeeccccCceEEEEEecC-CCEEEEEeCCCcEEEEEcccceEEEEEEcCc-cEEEEE
Q psy17610        225 LSGGGEGQVRIWKLTRESQS-LQCVLKEHTSSVSVIQIKSD-SKEAMSASTDGTCVLWDLIKSTRLIIMILPS-MIMSAA  301 (515)
Q Consensus       225 ~~~~~d~~i~iw~~~~~~~~-~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~  301 (515)
                      ++++.|+.+++|+....... .......|...|.+++|+|+ +.++++++.|+.|++||+++++.+..+..+. ++..+.
T Consensus       176 ~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~~~~~v~~~~  255 (325)
T d1pgua1         176 MTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGI  255 (325)
T ss_dssp             EEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCE
T ss_pred             EEeecccccccccccccccceecccccCCCCccEEeeeccccceeccccccccceeeeeeccccccccccccccccccce
Confidence            78999999999998543222 12234567888999999996 6789999999999999999999888876443 343333


Q ss_pred             Ec---CCCcEEEEEECCCeEEEEeCCCCceEEEEecCCC-ccEEEEEEcC-CCCEEEEEcCCCeEEEEEc
Q psy17610        302 YH---PSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDV-AAVNCVDFVD-DGKYFLTGGADQIVKMWMY  366 (515)
Q Consensus       302 ~~---~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~  366 (515)
                      |+   |++++|++++.|+.|++||+++++++..+..+.. ..+..+++.+ .+.+|++++.||.|++||+
T Consensus       256 ~s~~~~dg~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~dg~i~vwdl  325 (325)
T d1pgua1         256 FALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL  325 (325)
T ss_dssp             EEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEET
T ss_pred             eeeeccCCCEEEEEeCCCeEEEEECCCCCEEEEEEecCCcccCeEEEEEECCCCEEEEEECCCEEEEEEC
Confidence            33   6899999999999999999999999998876542 2233333333 2347889999999999996

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.5e-34  Score=260.01  Aligned_cols=282  Identities=12%  Similarity=0.117  Sum_probs=217.5

Q ss_pred             CCeEEEEEcCCCCEEEEecCCC-cEEEEEccCCceeeEEeeccc-cCceEEEEEec--CCCEEEEEeCCCcEEEEEcccc
Q psy17610        210 RGVTALAITQDGTRLLSGGGEG-QVRIWKLTRESQSLQCVLKEH-TSSVSVIQIKS--DSKEAMSASTDGTCVLWDLIKS  285 (515)
Q Consensus       210 ~~v~~~~~~~~~~~l~~~~~d~-~i~iw~~~~~~~~~~~~~~~~-~~~v~~~~~~~--~~~~l~~~~~d~~i~iwd~~~~  285 (515)
                      ..+++++|+|+++.|+.++.+. .|+.|+...........+.+| ...|++++|+|  ++.++++++.||+|++||+..+
T Consensus        18 ~~~t~l~~~~~~~~la~~~~~~~~i~~~~~~~~~~~~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~   97 (325)
T d1pgua1          18 NFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFD   97 (325)
T ss_dssp             TCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEE
T ss_pred             CCeEEEEECCCCCEEEEEeCCCEEEEEEeCCCCCccceEEEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecCC
Confidence            3567899999999999876543 356676654455556667777 46799999998  5679999999999999998654


Q ss_pred             eEE--------EE-EEcCccEEEEEEcCCCcEEEEEEC--CCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCE-EE
Q psy17610        286 TRL--------II-MILPSMIMSAAYHPSEVQLITCST--NKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKY-FL  353 (515)
Q Consensus       286 ~~~--------~~-~~~~~~~~~~~~~~~~~~l~~~~~--~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~  353 (515)
                      +..        .. ..+..++.+++|+++++++++++.  ++.+.+|+..+++.+..+..+. ..+.+++|+|++.+ ++
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~~~  176 (325)
T d1pgua1          98 KESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHS-QRINACHLKQSRPMRSM  176 (325)
T ss_dssp             GGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCS-SCEEEEEECSSSSCEEE
T ss_pred             cceeeeecccccccccccCcEEEEEECCCCCccceeeccccceEEEEeecccccceeeeecc-cccccccccccccceEE
Confidence            311        11 124467999999999999988765  6679999999999999988766 89999999998875 67


Q ss_pred             EEcCCCeEEEEEccCCeeeeec---cCCCCCeeEEEECCC-CcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeeccc
Q psy17610        354 TGGADQIVKMWMYREGVPCFVG---IGHAASITKIKISPD-KKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRST  429 (515)
Q Consensus       354 ~~~~dg~i~i~d~~~~~~~~~~---~~~~~~i~~~~~~~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~  429 (515)
                      +++.|+.+++||..+.+.....   ..|...|++++|+|+ +.+|++++.|+.|++||+++.+..               
T Consensus       177 ~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~~~---------------  241 (325)
T d1pgua1         177 TVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFL---------------  241 (325)
T ss_dssp             EEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEE---------------
T ss_pred             EeecccccccccccccccceecccccCCCCccEEeeeccccceeccccccccceeeeeecccccc---------------
Confidence            8999999999999887655443   567788999999996 689999999999999998765311               


Q ss_pred             ccccceeeecCcccEEEeeec---cCCcEEEEeecCCeEEEEecCCCeeeeeeccccc-ceEE--EEEEcCCCcEEEEee
Q psy17610        430 ARSTRLIIMILPSMIMSAAYH---PSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDV-AAVN--CVDFVDDGKYFLTGG  503 (515)
Q Consensus       430 ~~~~~~~~~~~~~~i~~~~~s---~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~-~~v~--~~~~s~~~~~l~s~~  503 (515)
                           ..+..|...+..+.|+   |++++|++++.|+.|+|||+.+++++..+..+.. ..+.  ++.+.++ .+|++++
T Consensus       242 -----~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~s~s  315 (325)
T d1pgua1         242 -----KYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGN-GRIISLS  315 (325)
T ss_dssp             -----EECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEET-TEEEEEE
T ss_pred             -----ccccccccccccceeeeeccCCCEEEEEeCCCeEEEEECCCCCEEEEEEecCCcccCeEEEEEECCC-CEEEEEE
Confidence                 1122233444444444   6899999999999999999999999988776541 2233  4444444 4789999


Q ss_pred             cCCeEEEEEE
Q psy17610        504 ADQIVKICLY  513 (515)
Q Consensus       504 ~dg~v~iw~~  513 (515)
                      .||.|++||+
T Consensus       316 ~dg~i~vwdl  325 (325)
T d1pgua1         316 LDGTLNFYEL  325 (325)
T ss_dssp             TTSCEEEEET
T ss_pred             CCCEEEEEEC
Confidence            9999999984

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=7.7e-33  Score=244.80  Aligned_cols=269  Identities=12%  Similarity=0.081  Sum_probs=217.0

Q ss_pred             eeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEe
Q psy17610        115 TLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFT  194 (515)
Q Consensus       115 ~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~  194 (515)
                      ++.+.+.||.++|++++|+|    |++++.||+|++||+.++.     ..|...|.++.+++++ .+++++.|+++++|+
T Consensus         4 ~~i~~l~gH~~~I~~l~~s~----l~sgs~Dg~v~~Wd~~~~~-----~~h~~~V~~~~~~~~~-~~~s~s~D~~v~~w~   73 (287)
T d1pgua2           4 EVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMH-----QDHSNLIVSLDNSKAQ-EYSSISWDDTLKVNG   73 (287)
T ss_dssp             EEEEEECCCSSCEEEEETTT----TEEEETTSCEEETTTTEEE-----CCCCSCEEEEECCSTT-CCEEEETTTEEEETT
T ss_pred             ceeEEECCCCCceEEEEECc----EEEEeCCCeEEEEECCCCC-----CCCCCCEEEEEecCCC-eEEEEeecccccccc
Confidence            56678899999999999987    8999999999999987643     4688899999998765 588999999999999


Q ss_pred             cCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCC
Q psy17610        195 PQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTD  274 (515)
Q Consensus       195 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  274 (515)
                      +...        .....+..+++++++..++++. ++.+.+|+...  ......+..+ ..  ..++++++..+++++.+
T Consensus        74 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~-~~--~~~~~~~~~~~~v~~~~  139 (287)
T d1pgua2          74 ITKH--------EFGSQPKVASANNDGFTAVLTN-DDDLLILQSFT--GDIIKSVRLN-SP--GSAVSLSQNYVAVGLEE  139 (287)
T ss_dssp             EEEE--------ECSSCEEEEEECSSSEEEEEET-TSEEEEEETTT--CCEEEEEECS-SC--EEEEEECSSEEEEEETT
T ss_pred             cccc--------ccccceeeeeeccCCceEEEee-cccceeeeccc--eeeeeecccc-ce--eeeeeccCcceeeeccc
Confidence            7542        1334577889998887777655 45688888743  3333333322 22  34667888888888877


Q ss_pred             C-cEEEEEcccceEEEEEE--cCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCC---
Q psy17610        275 G-TCVLWDLIKSTRLIIMI--LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDD---  348 (515)
Q Consensus       275 ~-~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~---  348 (515)
                      + .+++|++...+......  ....+.+++|+|++.+|++++.++.|++||+.+++........+...+.+++|+|+   
T Consensus       140 ~~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p~~~~  219 (287)
T d1pgua2         140 GNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKG  219 (287)
T ss_dssp             TSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC--
T ss_pred             cceeeeeeccccceeeeeeeccCCceeEEEeccCccccccccccccccceeecccccccccccccccccceeeecccccc
Confidence            5 79999998776655554  33579999999999999999999999999999988776554455588999999874   


Q ss_pred             -------CCEEEEEcCCCeEEEEEccC-CeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeC
Q psy17610        349 -------GKYFLTGGADQIVKMWMYRE-GVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTF  408 (515)
Q Consensus       349 -------~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~  408 (515)
                             +.++++|+.|+.|++||+++ .+.+..+.+|...|++++|+|++ .|++++.|+.|++|++
T Consensus       220 ~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~~~h~~~V~~v~~~~~~-~l~s~g~D~~v~iW~i  286 (287)
T d1pgua2         220 ANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPS-TLVSSGADACIKRWNV  286 (287)
T ss_dssp             ----CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETT-EEEEEETTSCEEEEEE
T ss_pred             cccccCCCCeeEeecCCCeEEEEECCCCCeEEEEeCCCCCCeEEEEECCCC-EEEEEECCCeEEEEEE
Confidence                   46899999999999999976 56677788999999999999986 5889999999999985

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=7.6e-33  Score=256.11  Aligned_cols=278  Identities=15%  Similarity=0.157  Sum_probs=212.4

Q ss_pred             EeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCc------eeEEEEecCeEEEEEEE---ee----CCCEEEEE
Q psy17610        118 LVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLN------ELLRISVMNMICACIVF---TY----DGKAILSG  184 (515)
Q Consensus       118 ~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~------~~~~~~~~~~~v~~~~~---~~----~~~~l~~~  184 (515)
                      ...++|.+.|.++++++  +++++++.|++|+|||..+.+      .......+...+..+..   .+    ++..++++
T Consensus         8 ~~~~~H~~~I~~v~~~~--~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~   85 (393)
T d1sq9a_           8 NAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATT   85 (393)
T ss_dssp             EESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEE
T ss_pred             ecCCcccCccEEEEEeC--CEEEEEECCCeEEEEECCCCCCCcccceeEeeeeccCCceEeeeEeeeccCCCCCcEEEEE
Confidence            45678999999999875  489999999999999976543      22233333333222221   11    23467789


Q ss_pred             eCCCeEEEEecCCCce----EE-Ee----cCCCCCCeEEEEEcCC-----CCEEEEecCCCcEEEEEccCCce-------
Q psy17610        185 WNDGFIRCFTPQSGKL----KF-II----PNAHNRGVTALAITQD-----GTRLLSGGGEGQVRIWKLTRESQ-------  243 (515)
Q Consensus       185 ~~dg~i~~~~~~~~~~----~~-~~----~~~~~~~v~~~~~~~~-----~~~l~~~~~d~~i~iw~~~~~~~-------  243 (515)
                      +.||.|++|++.....    .. ..    ...+...+..++|.++     +.++++++.||.+++|++.....       
T Consensus        86 ~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~  165 (393)
T d1sq9a_          86 SFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTL  165 (393)
T ss_dssp             ETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTT
T ss_pred             eCCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccceeee
Confidence            9999999998764322    11 11    0224556778888775     46789999999999999842210       


Q ss_pred             ---------eeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEE-------cCccEEEEEEcCCCc
Q psy17610        244 ---------SLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMI-------LPSMIMSAAYHPSEV  307 (515)
Q Consensus       244 ---------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-------~~~~~~~~~~~~~~~  307 (515)
                               ........+...+.+++|+|++ ++++++.|++|++||+.+++.+..+.       +..+|.+++|+|+++
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~  244 (393)
T d1sq9a_         166 NWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGS  244 (393)
T ss_dssp             CCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTT
T ss_pred             eeccceecccceecccCCCCcEEEEEECCCC-EEEEEeCCCcEEEEeecccccccccccccccccccceEEEcccccccc
Confidence                     0111223455668899999997 88999999999999999998877664       345799999999999


Q ss_pred             EEEEEECCC---eEEEEeCCCCceEEEEec------------CCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeee
Q psy17610        308 QLITCSTNK---MIDYWETCDGSIIRSLEG------------SDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPC  372 (515)
Q Consensus       308 ~l~~~~~~~---~i~~~d~~~~~~~~~~~~------------~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~  372 (515)
                      +|++++.|+   .|++||+++++.+..+..            .|...|++++|+|++++|++++.|++|++||+++++++
T Consensus       245 ~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g~~~  324 (393)
T d1sq9a_         245 LLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERI  324 (393)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEE
T ss_pred             eeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEECCCCCEE
Confidence            999999886   599999999998888752            24478999999999999999999999999999999999


Q ss_pred             eeccCCCCCee----EEEECCCCcEEEEEe
Q psy17610        373 FVGIGHAASIT----KIKISPDKKVIVSVS  398 (515)
Q Consensus       373 ~~~~~~~~~i~----~~~~~~~~~~l~~~~  398 (515)
                      .++.+|...|.    .++|+|++..+++++
T Consensus       325 ~~l~gH~~~v~~~~~~~~~~~~~~~~~~~~  354 (393)
T d1sq9a_         325 TTLNMHCDDIEIEEDILAVDEHGDSLAEPG  354 (393)
T ss_dssp             EEEECCGGGCSSGGGCCCBCTTSCBCSSCC
T ss_pred             EEECCcCCcccCCccEEEECCCCCEEEEcc
Confidence            99999998886    588999998876543

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-31  Score=237.13  Aligned_cols=273  Identities=21%  Similarity=0.397  Sum_probs=224.0

Q ss_pred             eeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCC
Q psy17610        119 VNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSG  198 (515)
Q Consensus       119 ~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~  198 (515)
                      ....|...|+|++|  |+++|++++.|++|+|||+++++++..+.+|...|.+++|  ++++|++++.|+.|++|++..+
T Consensus        10 ~~~~~~~~V~c~~~--d~~~l~sgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~v~~--~~~~l~s~s~D~~i~~~~~~~~   85 (293)
T d1p22a2          10 CRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTG   85 (293)
T ss_dssp             CCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSC
T ss_pred             ccCCCCCCEEEEEE--cCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEeeeec--ccceeecccccccccccccccc
Confidence            34568889998766  6789999999999999999999999999999999998876  6789999999999999999999


Q ss_pred             ceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCce-eeEEeeccccCceEEEEEecCCCEEEEEeCCCcE
Q psy17610        199 KLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQ-SLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTC  277 (515)
Q Consensus       199 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i  277 (515)
                      ....... .+...  ...+.+....++++..++.+.+|+...... .....+..|...+..+.+.  ...+++++.|+.+
T Consensus        86 ~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~s~d~~i  160 (293)
T d1p22a2          86 EMLNTLI-HHCEA--VLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTI  160 (293)
T ss_dssp             CEEEEEC-CCCSC--EEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEE
T ss_pred             ccccccc-ccccc--cccccccccceeecccccceeEeeccccccccccccccccccccccceec--ccccccccCCCce
Confidence            8877663 33332  334455667899999999999999865432 3344566788888777765  4578899999999


Q ss_pred             EEEEcccceEEEEEEcCc-cEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEc
Q psy17610        278 VLWDLIKSTRLIIMILPS-MIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGG  356 (515)
Q Consensus       278 ~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~  356 (515)
                      ++||+++++.+..+..+. .+..+.+  ++..+++++.|+.|++||+++.+.+.....+. ..+..  +++++.+|++|+
T Consensus       161 ~~~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~v~~--~~~~~~~l~sg~  235 (293)
T d1p22a2         161 KVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHE-ELVRC--IRFDNKRIVSGA  235 (293)
T ss_dssp             EEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCS-SCEEE--EECCSSEEEEEE
T ss_pred             eeecCCCCcEEEEEcccccccccccC--CCCeEEEecCCCEEEEEecccceeeeeecccc-eeeee--ccccceEEEEEc
Confidence            999999999888776554 5555555  46789999999999999999999998888765 55554  566788999999


Q ss_pred             CCCeEEEEEccC---------CeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEe
Q psy17610        357 ADQIVKMWMYRE---------GVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWT  407 (515)
Q Consensus       357 ~dg~i~i~d~~~---------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~  407 (515)
                      .||.|++||+..         ...+..+.+|.+.|++++|+  +++|++++.||+|++||
T Consensus       236 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~H~~~V~~v~~d--~~~l~s~s~Dg~i~iWD  293 (293)
T d1p22a2         236 YDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD--EFQIVSSSHDDTILIWD  293 (293)
T ss_dssp             TTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEEC--SSCEEECCSSSEEEEEC
T ss_pred             CCCEEEEEECCCCccccccCCceeeEEecCCCCCEEEEEEc--CCEEEEEecCCEEEEeC
Confidence            999999999754         24567788999999999994  56899999999999997

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=100.00  E-value=2.3e-33  Score=256.91  Aligned_cols=325  Identities=9%  Similarity=0.009  Sum_probs=248.1

Q ss_pred             ccCC-CCceEEEecCCCCeEEEEcCCCCCCcccccccceEEeeccccccccccccccccccCcceeeeccceEEEEEecC
Q psy17610          2 KTTP-NDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMGCYGKLIKKKVSTKLKDVNAEDVSLYSAGVTALYLLKD   80 (515)
Q Consensus         2 ~~~~-~~~~~~~g~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (515)
                      .||| ||++++++ ..|+|++||+++..                                              ....+|
T Consensus         9 ~fSP~dG~~~a~~-~~g~v~v~d~~~~~----------------------------------------------~~~~~~   41 (360)
T d1k32a3           9 DFSPLDGDLIAFV-SRGQAFIQDVSGTY----------------------------------------------VLKVPE   41 (360)
T ss_dssp             EEEECGGGCEEEE-ETTEEEEECTTSSB----------------------------------------------EEECSC
T ss_pred             cccCCCCCEEEEE-ECCeEEEEECCCCc----------------------------------------------EEEccC
Confidence            5898 89888876 56899999976531                                              112368


Q ss_pred             CCcEEEEEEecCCCEEEEEecC--ceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCce
Q psy17610         81 DSGISSLQYNPVNNKVFVGTVN--CEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNE  158 (515)
Q Consensus        81 ~~~v~~~~~s~~~~~l~~~~~d--~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~  158 (515)
                      ...|.+++|+|||++|++++.+  ..|++||.++++ +. .+..|...|.+++|+|++++|++++.++.+++|++.+++.
T Consensus        42 ~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~-~~-~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~  119 (360)
T d1k32a3          42 PLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGK-AE-KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKP  119 (360)
T ss_dssp             CSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCC-EE-ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred             CCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCc-EE-EeeCCCceEEeeeecccccccceeccccccccccccccce
Confidence            9999999999999999887655  379999999854 33 3456999999999999999999999999999999999999


Q ss_pred             eEEEEecCeEEEEEEEeeCCCEEEEEe----------CCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEec
Q psy17610        159 LLRISVMNMICACIVFTYDGKAILSGW----------NDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGG  228 (515)
Q Consensus       159 ~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  228 (515)
                      ...+..+...+.+++|+|+|++|+.+.          .++.+++|++.+++.....  .+...+..+.|+|+|++|++++
T Consensus       120 ~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~--~~~~~~~~~~~spdg~~l~~~s  197 (360)
T d1k32a3         120 TVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAAT--TENSHDYAPAFDADSKNLYYLS  197 (360)
T ss_dssp             EEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECS--CSSSBEEEEEECTTSCEEEEEE
T ss_pred             eeeeecccccccchhhccceeeeeeeccccccceeeccccceeeeccccCceeeec--ccccccccccccCCCCEEEEEe
Confidence            999998999999999999999998654          3456899999988776543  5777889999999999999999


Q ss_pred             CCCcEEEEEccCCce-----eeEEeeccccCceEEEEEecCCCEEEEEeCCC-----cEEEEEcccceEEEEEEcCccEE
Q psy17610        229 GEGQVRIWKLTRESQ-----SLQCVLKEHTSSVSVIQIKSDSKEAMSASTDG-----TCVLWDLIKSTRLIIMILPSMIM  298 (515)
Q Consensus       229 ~d~~i~iw~~~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~~~~~~~~~~~~~  298 (515)
                      .++.+.+|+......     ........+...+..+.+++++..+.++..+.     .+..++...+........+..+.
T Consensus       198 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (360)
T d1k32a3         198 YRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSIL  277 (360)
T ss_dssp             SCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEE
T ss_pred             CCCceEcccccccceeeccccceEEEecccCccccceECCCcCcccccceeecccccceeecccCcCceeEeeecCCCce
Confidence            999999999743221     11222334455555566677776665544332     24444555555555555555555


Q ss_pred             EEEEcCCC---cEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeec
Q psy17610        299 SAAYHPSE---VQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVG  375 (515)
Q Consensus       299 ~~~~~~~~---~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~  375 (515)
                      .+.+.+.+   .+++.+..++.+++||+.+++... +.    ..+..++|+|||++|++++.||.|++||+++++...++
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~-~~----~~v~~~~~SpDG~~l~~~~~Dg~i~v~d~~~~~~~~~~  352 (360)
T d1k32a3         278 IYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTE-VK----NNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTV  352 (360)
T ss_dssp             EEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEEE-EE----EEEEEEEECTTSCEEEEEETTSCEEEEESSCTTSCEEC
T ss_pred             EEEEEecCCCeeEEEecCCCCEEEEEECCCCeEEE-ec----CCcCEEEECCCCCEEEEEECCCeEEEEECCCCCcceEE
Confidence            55554443   456777889999999998876532 22    56889999999999999999999999999998877776


Q ss_pred             cCCCCCe
Q psy17610        376 IGHAASI  382 (515)
Q Consensus       376 ~~~~~~i  382 (515)
                      ..+..++
T Consensus       353 ~~d~~~~  359 (360)
T d1k32a3         353 ETDKRPL  359 (360)
T ss_dssp             CCCSSCE
T ss_pred             Eeccccc
Confidence            6555443

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.6e-32  Score=247.54  Aligned_cols=302  Identities=13%  Similarity=0.134  Sum_probs=225.8

Q ss_pred             ecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCcee-eEEeeccccCceEEEEEecCC-CEEEEEeCCCcEEEEE
Q psy17610        204 IPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQS-LQCVLKEHTSSVSVIQIKSDS-KEAMSASTDGTCVLWD  281 (515)
Q Consensus       204 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd  281 (515)
                      +..+|...|++++|+|++++|++|+.||+|++||++..... ......+|..+|.+++|+|++ .++++++.|+.|++|+
T Consensus         6 ~~~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~w~   85 (342)
T d1yfqa_           6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVD   85 (342)
T ss_dssp             CSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEEC
T ss_pred             cCCCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccceeeee
Confidence            45899999999999999999999999999999999654332 233344799999999999875 5788999999999999


Q ss_pred             cccceEEEEEEcCc--cEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEe----cC-CCccEEEEEEcCCCCEEEE
Q psy17610        282 LIKSTRLIIMILPS--MIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLE----GS-DVAAVNCVDFVDDGKYFLT  354 (515)
Q Consensus       282 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~----~~-~~~~i~~~~~~~~~~~l~~  354 (515)
                      +.............  ......+.++...+++++.++.+++||++.+.......    .. .......+.+.+++..+++
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (342)
T d1yfqa_          86 LIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIV  165 (342)
T ss_dssp             SSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccceeeccccccceeeecccccccccceeeeeeeeccCCceee
Confidence            98877666554433  34556677788999999999999999986654332222    11 1123456677888899999


Q ss_pred             EcCCCeEEEEEccCCeeee---eccCCCCCeeEEEECC-CCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccc
Q psy17610        355 GGADQIVKMWMYREGVPCF---VGIGHAASITKIKISP-DKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTA  430 (515)
Q Consensus       355 ~~~dg~i~i~d~~~~~~~~---~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~  430 (515)
                      ++.|+.|++|++.......   ....+...+.+..+.+ ++..+++++.||.+.+|++..................    
T Consensus       166 ~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~~----  241 (342)
T d1yfqa_         166 GMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCH----  241 (342)
T ss_dssp             EESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECC----
T ss_pred             ecCCCcEEEEecccCcccceeeeecccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeeccccceeeee----
Confidence            9999999999997764332   2234445566666555 6789999999999999998765433322221111111    


Q ss_pred             cccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEEE
Q psy17610        431 RSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKI  510 (515)
Q Consensus       431 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~i  510 (515)
                       ........+...+++++|+|++++||+|+.||.|++||+.+++.+..+..++  .+..++|+|++++|++++.|+.+++
T Consensus       242 -~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~~l~~~~~~~--~~~~~~~s~~~~~l~~a~sdd~~~~  318 (342)
T d1yfqa_         242 -RLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFN--EDSVVKIACSDNILCLATSDDTFKT  318 (342)
T ss_dssp             -CCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCS--SSEEEEEEECSSEEEEEEECTHHHH
T ss_pred             -eeccCCCcccccceeEEecCCccEEEEECCCCEEEEEECCCCcEEEEecCCC--CCEEEEEEeCCCEEEEEEcCCcEEE
Confidence             1111223455678999999999999999999999999999999999887664  4556778889999999998887766


Q ss_pred             EE
Q psy17610        511 CL  512 (515)
Q Consensus       511 w~  512 (515)
                      |.
T Consensus       319 ~~  320 (342)
T d1yfqa_         319 NA  320 (342)
T ss_dssp             CS
T ss_pred             ee
Confidence            64

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-31  Score=237.58  Aligned_cols=271  Identities=22%  Similarity=0.341  Sum_probs=216.1

Q ss_pred             CCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccc
Q psy17610        206 NAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKS  285 (515)
Q Consensus       206 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~  285 (515)
                      ..|...|+|++|  ++++|++|+.||.|++||+.  +.+....+.+|...|.+++|  ++++|++++.|+.+++|++..+
T Consensus        12 ~~~~~~V~c~~~--d~~~l~sgs~Dg~i~vWd~~--~~~~~~~l~~H~~~V~~v~~--~~~~l~s~s~D~~i~~~~~~~~   85 (293)
T d1p22a2          12 SETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKN--TLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTG   85 (293)
T ss_dssp             CSSCCCEEEEEC--CSSEEEEEESSSCEEEEESS--SCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSC
T ss_pred             CCCCCCEEEEEE--cCCEEEEEeCCCeEEEEECC--CCcEEEEEecCCCCEeeeec--ccceeecccccccccccccccc
Confidence            567888998765  78999999999999999994  56677889999999998876  6789999999999999999988


Q ss_pred             eEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEE--ecCCCccEEEEEEcCCCCEEEEEcCCCeEEE
Q psy17610        286 TRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSL--EGSDVAAVNCVDFVDDGKYFLTGGADQIVKM  363 (515)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i  363 (515)
                      ............ .....+....++++..++.+.+|+..........  ...+...+..+.+.+  ..+++++.|+.+++
T Consensus        86 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~s~d~~i~~  162 (293)
T d1p22a2          86 EMLNTLIHHCEA-VLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTIKV  162 (293)
T ss_dssp             CEEEEECCCCSC-EEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEET--TEEEEEETTSEEEE
T ss_pred             cccccccccccc-cccccccccceeecccccceeEeeccccccccccccccccccccccceecc--cccccccCCCceee
Confidence            877766555443 3345566778899999999999998876543322  223336677666654  57888999999999


Q ss_pred             EEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCccc
Q psy17610        364 WMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSM  443 (515)
Q Consensus       364 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  443 (515)
                      ||.++++.+..+.++...+..+.++  +.++++++.||.|++||+......                    .....+...
T Consensus       163 ~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~--------------------~~~~~~~~~  220 (293)
T d1p22a2         163 WNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACL--------------------RVLEGHEEL  220 (293)
T ss_dssp             EETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEE--------------------EEECCCSSC
T ss_pred             ecCCCCcEEEEEcccccccccccCC--CCeEEEecCCCEEEEEecccceee--------------------eeeccccee
Confidence            9999999999999999999888875  568999999999999998764311                    111223333


Q ss_pred             EEEeeeccCCcEEEEeecCCeEEEEecCC---------CeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEEEEE
Q psy17610        444 IMSAAYHPSEVQLITCSTNKMIDYWETCD---------GSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKICL  512 (515)
Q Consensus       444 i~~~~~s~~~~~l~~~~~dg~v~iwd~~~---------~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~  512 (515)
                      +.  .+++++.+|++++.||.|++||+.+         ..++..+.+|. +.|.+++|  ++++|+|++.||+|++||
T Consensus       221 v~--~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~H~-~~V~~v~~--d~~~l~s~s~Dg~i~iWD  293 (293)
T d1p22a2         221 VR--CIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHS-GRVFRLQF--DEFQIVSSSHDDTILIWD  293 (293)
T ss_dssp             EE--EEECCSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCS-SCCCCEEE--CSSCEEECCSSSEEEEEC
T ss_pred             ee--eccccceEEEEEcCCCEEEEEECCCCccccccCCceeeEEecCCC-CCEEEEEE--cCCEEEEEecCCEEEEeC
Confidence            44  4567889999999999999999754         34667788887 89999999  567899999999999997

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.1e-32  Score=250.07  Aligned_cols=294  Identities=12%  Similarity=0.069  Sum_probs=226.0

Q ss_pred             eeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCcee---EEEEecCeEEEEEEEeeCC-CEEEEEeCCCeE
Q psy17610        115 TLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNEL---LRISVMNMICACIVFTYDG-KAILSGWNDGFI  190 (515)
Q Consensus       115 ~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~---~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i  190 (515)
                      ++..+.++|.+.|++|+|+|++++|++++.|++|+|||++++...   .....|..+|.+++|+|++ .+|++|+.|+.|
T Consensus         2 ~~v~~~~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v   81 (342)
T d1yfqa_           2 QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEI   81 (342)
T ss_dssp             EEEECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCE
T ss_pred             CeEEcCCCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccce
Confidence            455678899999999999999999999999999999999876543   3334689999999999975 578899999999


Q ss_pred             EEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCcee--eEEeeccc--cCceEEEEEecCCC
Q psy17610        191 RCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQS--LQCVLKEH--TSSVSVIQIKSDSK  266 (515)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~--~~~~~~~~--~~~v~~~~~~~~~~  266 (515)
                      ++|++..+.........+........+.++...+++++.++.+++||++.....  .......+  ........+.+++.
T Consensus        82 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (342)
T d1yfqa_          82 LKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSS  161 (342)
T ss_dssp             EEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSS
T ss_pred             eeeecccccccccccccccccccccccccccccccccccccccceeeccccccceeeecccccccccceeeeeeeeccCC
Confidence            999999988877775555555666677778889999999999999998643222  22222222  23345667788899


Q ss_pred             EEEEEeCCCcEEEEEcccceEEEE----EEcCccEEEEEEcC-CCcEEEEEECCCeEEEEeCCCCceE------EEEe--
Q psy17610        267 EAMSASTDGTCVLWDLIKSTRLII----MILPSMIMSAAYHP-SEVQLITCSTNKMIDYWETCDGSII------RSLE--  333 (515)
Q Consensus       267 ~l~~~~~d~~i~iwd~~~~~~~~~----~~~~~~~~~~~~~~-~~~~l~~~~~~~~i~~~d~~~~~~~------~~~~--  333 (515)
                      .+++++.|+.|++||+...+....    ...........+.+ ++..+++++.+|.+.+|+.......      ..+.  
T Consensus       162 ~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~~  241 (342)
T d1yfqa_         162 RLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCH  241 (342)
T ss_dssp             EEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECC
T ss_pred             ceeeecCCCcEEEEecccCcccceeeeecccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeeccccceeeee
Confidence            999999999999999976543221    22223455555544 6788999999999999987653211      1111  


Q ss_pred             ------cCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEe
Q psy17610        334 ------GSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWT  407 (515)
Q Consensus       334 ------~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~  407 (515)
                            ..+...+++++|+|++++|++|+.||.|++||+++++.+..+..+ ..+..++|+|++++|++++.|+.+++|.
T Consensus       242 ~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~~l~~~~~~-~~~~~~~~s~~~~~l~~a~sdd~~~~~~  320 (342)
T d1yfqa_         242 RLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF-NEDSVVKIACSDNILCLATSDDTFKTNA  320 (342)
T ss_dssp             CCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCC-SSSEEEEEEECSSEEEEEEECTHHHHCS
T ss_pred             eeccCCCcccccceeEEecCCccEEEEECCCCEEEEEECCCCcEEEEecCC-CCCEEEEEEeCCCEEEEEEcCCcEEEee
Confidence                  122357899999999999999999999999999999998887543 3455678888999999999999988886


Q ss_pred             CC
Q psy17610        408 FP  409 (515)
Q Consensus       408 ~~  409 (515)
                      ..
T Consensus       321 ~~  322 (342)
T d1yfqa_         321 AI  322 (342)
T ss_dssp             SS
T ss_pred             ee
Confidence            54

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=100.00  E-value=6.2e-34  Score=260.71  Aligned_cols=322  Identities=10%  Similarity=0.005  Sum_probs=244.7

Q ss_pred             EEEeCC-CCcEEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCC--eEEEEecCCCceEEEec
Q psy17610        129 DLQFPV-NFSSVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDG--FIRCFTPQSGKLKFIIP  205 (515)
Q Consensus       129 ~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~~~~~~~~~~~~~~~  205 (515)
                      .-.||| ||+++++++ ++.|.+||++.+..++ + .|...|.+++|+|||++|++++.+.  .|++||.++++....  
T Consensus         7 ~~~fSP~dG~~~a~~~-~g~v~v~d~~~~~~~~-~-~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~~~~--   81 (360)
T d1k32a3           7 AEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK-V-PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKF--   81 (360)
T ss_dssp             EEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE-C-SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEEEC--
T ss_pred             cccccCCCCCEEEEEE-CCeEEEEECCCCcEEE-c-cCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcEEEe--
Confidence            457999 898877765 6899999998876654 3 6888999999999999998776553  799999998887654  


Q ss_pred             CCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEe----------CCC
Q psy17610        206 NAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAS----------TDG  275 (515)
Q Consensus       206 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~  275 (515)
                      ..|...+.+++|+|++++|++++.++.+++|+..  .......+..|...+.+++|+|+|++|+.+.          .++
T Consensus        82 ~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~  159 (360)
T d1k32a3          82 EENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLE--TGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQ  159 (360)
T ss_dssp             CCCCCSEEEEEECTTSSEEEEEETTSEEEEEETT--TCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEE
T ss_pred             eCCCceEEeeeecccccccceecccccccccccc--ccceeeeeecccccccchhhccceeeeeeeccccccceeecccc
Confidence            5899999999999999999999999999999995  4455566778888999999999999998654          345


Q ss_pred             cEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCce-------EEEEecCCCccEEEEEEcCC
Q psy17610        276 TCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSI-------IRSLEGSDVAAVNCVDFVDD  348 (515)
Q Consensus       276 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~-------~~~~~~~~~~~i~~~~~~~~  348 (515)
                      .+++||+.+++.............++|+|++++|++++.++.+.+|+......       ...+..+. .....+.++++
T Consensus       160 ~~~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~s~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~  238 (360)
T d1k32a3         160 AIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIP-GSPNPTKLVPR  238 (360)
T ss_dssp             EEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESST-TCCCGGGCCCG
T ss_pred             ceeeeccccCceeeecccccccccccccCCCCEEEEEeCCCceEcccccccceeeccccceEEEeccc-CccccceECCC
Confidence            68999999998887777778899999999999999999999999999765433       22222222 33444566777


Q ss_pred             CCEEEEEcCCC-----eEEEEEccCCeeeeeccCCCCCeeEEEECC---CCcEEEEEeCCCcEEEEeCCCCcCccCCCcc
Q psy17610        349 GKYFLTGGADQ-----IVKMWMYREGVPCFVGIGHAASITKIKISP---DKKVIVSVSADGGIFLWTFPELEDDVGDSRS  420 (515)
Q Consensus       349 ~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~---~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~  420 (515)
                      +..++.+..+.     .+..++...+.. ..+..+...+..+.+.+   +..++++++.++.+++||+...+.       
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~-------  310 (360)
T d1k32a3         239 SMTSEAGEYDLNDMYKRSSPINVDPGDY-RMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKV-------  310 (360)
T ss_dssp             GGSCCCCCCCCTTGGGGCEECSCCCBCE-EEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCE-------
T ss_pred             cCcccccceeecccccceeecccCcCce-eEeeecCCCceEEEEEecCCCeeEEEecCCCCEEEEEECCCCeE-------
Confidence            76666554332     233334333332 22334445555555544   344678888899999999876421       


Q ss_pred             cceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccc
Q psy17610        421 LSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSD  483 (515)
Q Consensus       421 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~  483 (515)
                                       ..+...+..++|||||++|++++.||.|++||+++++...++..+.
T Consensus       311 -----------------~~~~~~v~~~~~SpDG~~l~~~~~Dg~i~v~d~~~~~~~~~~~~d~  356 (360)
T d1k32a3         311 -----------------TEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTVETDK  356 (360)
T ss_dssp             -----------------EEEEEEEEEEEECTTSCEEEEEETTSCEEEEESSCTTSCEECCCCS
T ss_pred             -----------------EEecCCcCEEEECCCCCEEEEEECCCeEEEEECCCCCcceEEEecc
Confidence                             0122448899999999999999999999999999998877776554

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.1e-31  Score=248.32  Aligned_cols=312  Identities=13%  Similarity=0.139  Sum_probs=222.3

Q ss_pred             EecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCce-----eEEeeccCccCeEE------EEeCC-CCcEEEEEec
Q psy17610         77 LLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFT-----LTLVNTCHTSAIYD------LQFPV-NFSSVFATCS  144 (515)
Q Consensus        77 ~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~-----~~~~~~~h~~~v~~------~~~~~-~~~~l~~~~~  144 (515)
                      ..+|.+.|.++++++  +++++++.|+.|++||..+...     .......|...+..      +..++ ++..+++++.
T Consensus        10 ~~~H~~~I~~v~~~~--~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~   87 (393)
T d1sq9a_          10 GKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSF   87 (393)
T ss_dssp             SSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEET
T ss_pred             CCcccCccEEEEEeC--CEEEEEECCCeEEEEECCCCCCCcccceeEeeeeccCCceEeeeEeeeccCCCCCcEEEEEeC
Confidence            357999999999874  6899999999999999765321     11112224443332      23332 2345667777


Q ss_pred             CCcEEEEeCCCCceeEEEE----------ecCeEEEEEEEeeC-----CCEEEEEeCCCeEEEEecCCCc----------
Q psy17610        145 KNDIRIWSVRTLNELLRIS----------VMNMICACIVFTYD-----GKAILSGWNDGFIRCFTPQSGK----------  199 (515)
Q Consensus       145 d~~i~iw~~~~~~~~~~~~----------~~~~~v~~~~~~~~-----~~~l~~~~~dg~i~~~~~~~~~----------  199 (515)
                      |+.|++|++........+.          .+...+..++|.++     +.++++++.||.+++|++....          
T Consensus        88 dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~~  167 (393)
T d1sq9a_          88 SGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNW  167 (393)
T ss_dssp             TSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCC
T ss_pred             CCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccceeeeee
Confidence            9999999986544322221          12344667778765     4578999999999999974321          


Q ss_pred             -----eEE--EecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCcee----eEEeeccccCceEEEEEecCCCEE
Q psy17610        200 -----LKF--IIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQS----LQCVLKEHTSSVSVIQIKSDSKEA  268 (515)
Q Consensus       200 -----~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l  268 (515)
                           ...  .....+...+.+++|+|++ +|++|+.|+.|++||+.+....    ....+.+|..+|.+++|+|++++|
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l  246 (393)
T d1sq9a_         168 SPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLL  246 (393)
T ss_dssp             CCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEE
T ss_pred             ccceecccceecccCCCCcEEEEEECCCC-EEEEEeCCCcEEEEeecccccccccccccccccccceEEEccccccccee
Confidence                 111  1113455668999999987 8999999999999999654322    123456799999999999999999


Q ss_pred             EEEeCCCc---EEEEEcccceEEEEEE--------------cCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEE
Q psy17610        269 MSASTDGT---CVLWDLIKSTRLIIMI--------------LPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRS  331 (515)
Q Consensus       269 ~~~~~d~~---i~iwd~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~  331 (515)
                      ++++.|++   |++||+++++.+..+.              +...|.+++|+|++++|++++.|++|++||+++++++.+
T Consensus       247 ~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g~~~~~  326 (393)
T d1sq9a_         247 AIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITT  326 (393)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred             eeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEECCCCCEEEE
Confidence            99999874   8999999998887764              445799999999999999999999999999999999999


Q ss_pred             EecCCCccEE----EEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEe
Q psy17610        332 LEGSDVAAVN----CVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWT  407 (515)
Q Consensus       332 ~~~~~~~~i~----~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~  407 (515)
                      +.+|. ..|.    .++|+|++..+++++   ...++.+..+......            ......|++++.|+.|++|.
T Consensus       327 l~gH~-~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~d~~ir~~~  390 (393)
T d1sq9a_         327 LNMHC-DDIEIEEDILAVDEHGDSLAEPG---VFDVKFLKKGWRSGMG------------ADLNESLCCVCLDRSIRWFR  390 (393)
T ss_dssp             EECCG-GGCSSGGGCCCBCTTSCBCSSCC---EEEEEEECTTTSBSTT------------CTTSCEEEEEETTTEEEEEE
T ss_pred             ECCcC-CcccCCccEEEECCCCCEEEEcc---cceEEECccCceeccc------------cCCCCEEEEEEcCCeEEEEe
Confidence            99876 5554    578999998776543   2222222222111000            01245688999999999996

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=100.00  E-value=3.3e-31  Score=246.49  Aligned_cols=352  Identities=12%  Similarity=0.020  Sum_probs=256.4

Q ss_pred             ecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCcee--EEEE---e
Q psy17610         90 NPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNEL--LRIS---V  164 (515)
Q Consensus        90 s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~--~~~~---~  164 (515)
                      ++++-++++.+.+|+|.+||.++++.+..+.. | ..+..++|||||+++++++.|+.+++||+.+++..  .++.   .
T Consensus        29 ~~~~~~~v~~~d~g~v~v~D~~t~~v~~~~~~-g-~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~  106 (432)
T d1qksa2          29 DLENLFSVTLRDAGQIALIDGSTYEIKTVLDT-G-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSE  106 (432)
T ss_dssp             CGGGEEEEEETTTTEEEEEETTTCCEEEEEEC-S-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSE
T ss_pred             CCCcEEEEEEcCCCEEEEEECCCCcEEEEEeC-C-CCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCC
Confidence            33444457888899999999999766665544 4 36999999999999999999999999999887643  3333   4


Q ss_pred             cCeEEEEEEEeeCCCEE-EEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCce
Q psy17610        165 MNMICACIVFTYDGKAI-LSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQ  243 (515)
Q Consensus       165 ~~~~v~~~~~~~~~~~l-~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~  243 (515)
                      +.+.+.+..|+|||++| ++++.++.+++||..+++.+..+ ..|...+....+.++++                     
T Consensus       107 ~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~-~~~~~~~~~~~~~~~~~---------------------  164 (432)
T d1qksa2         107 ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQ-STRGMTYDEQEYHPEPR---------------------  164 (432)
T ss_dssp             EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEE-ECCEECTTTCCEESCCC---------------------
T ss_pred             CCCeEEecccCCCCCEEEEEcCCCCeEEEEeCccccceeee-ccCCccccceeccCCCc---------------------
Confidence            44556667788899986 67888999999999999988877 34444333333333332                     


Q ss_pred             eeEEeeccccCceEEEEEecCCCEEE-EEeCCCcEEEEEcccceEE--EEEEcCccEEEEEEcCCCcEEEEEEC-CCeEE
Q psy17610        244 SLQCVLKEHTSSVSVIQIKSDSKEAM-SASTDGTCVLWDLIKSTRL--IIMILPSMIMSAAYHPSEVQLITCST-NKMID  319 (515)
Q Consensus       244 ~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~i~  319 (515)
                                  ...+.++|++..++ +...++.+.+||..+.+..  ..+.....+..++++|+++++++++. +..+.
T Consensus       165 ------------~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~~~~~~~~~i~~g~~~~~~~~spdg~~~~va~~~~~~v~  232 (432)
T d1qksa2         165 ------------VAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLV  232 (432)
T ss_dssp             ------------EEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEE
T ss_pred             ------------eeEEEECCCCCEEEEEEccCCeEEEEEccCCCcceEEEEcccCccccceECCCCCEEEEeccccceEE
Confidence                        23356777777654 4555688889988776543  34455567889999999998887776 55899


Q ss_pred             EEeCCCCceEEEEecCC----CccEEEEEEcCCCCEEEEEc-CCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEE
Q psy17610        320 YWETCDGSIIRSLEGSD----VAAVNCVDFVDDGKYFLTGG-ADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVI  394 (515)
Q Consensus       320 ~~d~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l  394 (515)
                      ++|..+++....+....    ........+.+.+...++.. .++.+.+|+.....    ...|...+....++|++..+
T Consensus       233 v~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~lg~~~v~~~~~~~~~----~~~~~~~v~~~~~~~~g~~~  308 (432)
T d1qksa2         233 VIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEG----HPDNAWKILDSFPALGGGSL  308 (432)
T ss_dssp             EEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTT----CTTTBTSEEEEEECSCSCCC
T ss_pred             EeecccceEEEEeccCccccccCcccceecCCCCceecccccCCceEEeccccccc----ccccccEEEEEEEcCCCCeE
Confidence            99999998888776432    13334445555555555443 37889999875542    34677789999999999999


Q ss_pred             EEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCe
Q psy17610        395 VSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGS  474 (515)
Q Consensus       395 ~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~  474 (515)
                      ++++.+...++|.......                          +......+++ ||++.+++++.|+.+++|++.++.
T Consensus       309 ~~~s~p~~~~lw~~~~~~~--------------------------~~~~~~sv~v-pDg~~la~~s~d~~~k~w~~~~~~  361 (432)
T d1qksa2         309 FIKTHPNSQYLYVDATLNP--------------------------EAEISGSVAV-FDIKAMTGDGSDPEFKTLPIAEWA  361 (432)
T ss_dssp             CEECCTTCSEEEEECTTCS--------------------------SHHHHTCEEE-EEGGGCCCSSSCCCEEEECHHHHH
T ss_pred             EEEecCCccceeecccCCC--------------------------CCCeeeEEEE-EechhhcccccCCceEeccccccc
Confidence            9999999999997654321                          1111233444 899999999999999999986654


Q ss_pred             eeeeecccccceEEEEEEcCCCcEEEEee-----cCCeEEEEE
Q psy17610        475 IIRSLEGSDVAAVNCVDFVDDGKYFLTGG-----ADQIVKICL  512 (515)
Q Consensus       475 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-----~dg~v~iw~  512 (515)
                      .+   ..|+ .++..++|||||++++.+.     .+|.|+|||
T Consensus       362 ~l---~~~~-~~v~~~~fS~DG~~v~~S~~~~~~~~g~i~i~D  400 (432)
T d1qksa2         362 GI---TEGQ-PRVVQGEFNKDGTEVWFSVWNGKDQESALVVVD  400 (432)
T ss_dssp             TC---CSSC-CEEEEEEECTTSSEEEEEEECCTTSCCEEEEEE
T ss_pred             cc---CCCC-CcEEEeEECCCCCEEEEEEecCCCCCCcEEEEE
Confidence            33   3454 7899999999999886543     468899988

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=100.00  E-value=1.4e-30  Score=242.24  Aligned_cols=333  Identities=8%  Similarity=-0.039  Sum_probs=242.5

Q ss_pred             CcEEEEEEecCCCEEEEEecCceEEEEECCCCcee--EE--eeccCccCeEEEEeCCCCcEEEE-EecCCcEEEEeCCCC
Q psy17610         82 SGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTL--TL--VNTCHTSAIYDLQFPVNFSSVFA-TCSKNDIRIWSVRTL  156 (515)
Q Consensus        82 ~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~--~~--~~~~h~~~v~~~~~~~~~~~l~~-~~~d~~i~iw~~~~~  156 (515)
                      ..+..++|||||+++++++.|+.|.+||+.+++..  ..  ...+|.+.+.+..|+|||++|++ +..++++++||..++
T Consensus        62 ~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~  141 (432)
T d1qksa2          62 YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETL  141 (432)
T ss_dssp             SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTC
T ss_pred             CCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCeEEecccCCCCCEEEEEcCCCCeEEEEeCccc
Confidence            46999999999999999999999999999886432  11  22357777888889999998755 555999999999999


Q ss_pred             ceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEE-EEecCCCcEEE
Q psy17610        157 NELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRL-LSGGGEGQVRI  235 (515)
Q Consensus       157 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~i  235 (515)
                      +.+..+..+...+....+.++++                                ...+.++|++..+ ++...++.|.+
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~--------------------------------~~~v~~s~dg~~~~vs~~~~~~i~~  189 (432)
T d1qksa2         142 EPKKIQSTRGMTYDEQEYHPEPR--------------------------------VAAILASHYRPEFIVNVKETGKILL  189 (432)
T ss_dssp             CEEEEEECCEECTTTCCEESCCC--------------------------------EEEEEECSSSSEEEEEETTTTEEEE
T ss_pred             cceeeeccCCccccceeccCCCc--------------------------------eeEEEECCCCCEEEEEEccCCeEEE
Confidence            99888876654444344444433                                3446788888765 45667789999


Q ss_pred             EEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeC-CCcEEEEEcccceEEEEEEcCc------cEEEEEEcCCCcE
Q psy17610        236 WKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST-DGTCVLWDLIKSTRLIIMILPS------MIMSAAYHPSEVQ  308 (515)
Q Consensus       236 w~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~------~~~~~~~~~~~~~  308 (515)
                      |+...........+ .+...+..++|+|+|+++++++. ++.+.++|..+.+.........      ......+...+..
T Consensus       190 ~d~~~~~~~~~~~i-~~g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~  268 (432)
T d1qksa2         190 VDYTDLNNLKTTEI-SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPV  268 (432)
T ss_dssp             EETTCSSEEEEEEE-ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEE
T ss_pred             EEccCCCcceEEEE-cccCccccceECCCCCEEEEeccccceEEEeecccceEEEEeccCccccccCcccceecCCCCce
Confidence            99864433333332 34566789999999998877765 4578999999988887775442      2344444444444


Q ss_pred             EEEEE-CCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEE
Q psy17610        309 LITCS-TNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKI  387 (515)
Q Consensus       309 l~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~  387 (515)
                      ..... .++.+.+|+......    .. +...+....++|++..+++++.++..++|+..+.      ..|.....++++
T Consensus       269 ~~~~~lg~~~v~~~~~~~~~~----~~-~~~~v~~~~~~~~g~~~~~~s~p~~~~lw~~~~~------~~~~~~~~sv~v  337 (432)
T d1qksa2         269 WATSHMGDDSVALIGTDPEGH----PD-NAWKILDSFPALGGGSLFIKTHPNSQYLYVDATL------NPEAEISGSVAV  337 (432)
T ss_dssp             EEEEBSSSSEEEEEECCTTTC----TT-TBTSEEEEEECSCSCCCCEECCTTCSEEEEECTT------CSSHHHHTCEEE
T ss_pred             ecccccCCceEEecccccccc----cc-cccEEEEEEEcCCCCeEEEEecCCccceeecccC------CCCCCeeeEEEE
Confidence            44443 377888988665432    12 2256778899999999999999999999986543      234444455665


Q ss_pred             CCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEee-----cC
Q psy17610        388 SPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCS-----TN  462 (515)
Q Consensus       388 ~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-----~d  462 (515)
                       ||++.|++++.|+.+++|++.+..                       .+..+...+.+++|||||++++.+.     .+
T Consensus       338 -pDg~~la~~s~d~~~k~w~~~~~~-----------------------~l~~~~~~v~~~~fS~DG~~v~~S~~~~~~~~  393 (432)
T d1qksa2         338 -FDIKAMTGDGSDPEFKTLPIAEWA-----------------------GITEGQPRVVQGEFNKDGTEVWFSVWNGKDQE  393 (432)
T ss_dssp             -EEGGGCCCSSSCCCEEEECHHHHH-----------------------TCCSSCCEEEEEEECTTSSEEEEEEECCTTSC
T ss_pred             -EechhhcccccCCceEeccccccc-----------------------ccCCCCCcEEEeEECCCCCEEEEEEecCCCCC
Confidence             899999999999999999874321                       1112345588999999999886553     46


Q ss_pred             CeEEEEecCCCeeeeeeccc
Q psy17610        463 KMIDYWETCDGSIIRSLEGS  482 (515)
Q Consensus       463 g~v~iwd~~~~~~~~~~~~~  482 (515)
                      |.|.|||..++++...+.+.
T Consensus       394 g~i~i~D~~T~k~~~~i~~~  413 (432)
T d1qksa2         394 SALVVVDDKTLELKHVIKDE  413 (432)
T ss_dssp             CEEEEEETTTTEEEEEECCT
T ss_pred             CcEEEEECCCceEEeEecCC
Confidence            88999999999998888764

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.98  E-value=9.6e-31  Score=244.31  Aligned_cols=350  Identities=8%  Similarity=0.015  Sum_probs=243.0

Q ss_pred             EEeCCCCc--EEEEEecCCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEE--ec
Q psy17610        130 LQFPVNFS--SVFATCSKNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFI--IP  205 (515)
Q Consensus       130 ~~~~~~~~--~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~--~~  205 (515)
                      +.++.|.+  .+++...|++|+|||+.+++.+.++..+. .+..++|+|||+++++++.|+.+++||+.+++....  +.
T Consensus        24 ~~~~~d~~~~~~V~~~~dg~v~vwD~~t~~~~~~l~~g~-~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~  102 (426)
T d1hzua2          24 QLNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGY-AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK  102 (426)
T ss_dssp             CCSCCCGGGEEEEEETTTTEEEEEETTTCSEEEEEECCS-SEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE
T ss_pred             ccccCCCCeEEEEEEcCCCEEEEEECCCCcEEEEEeCCC-CeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEe
Confidence            34555543  34555669999999999999999998765 478999999999999999999999999999875432  21


Q ss_pred             --CCCCCCeEEEEEcCCCCEEEEe-cCCCcEEEEEccCCceeeEEeeccccCc-----------eEEEEEecCCCEEEEE
Q psy17610        206 --NAHNRGVTALAITQDGTRLLSG-GGEGQVRIWKLTRESQSLQCVLKEHTSS-----------VSVIQIKSDSKEAMSA  271 (515)
Q Consensus       206 --~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iw~~~~~~~~~~~~~~~~~~~-----------v~~~~~~~~~~~l~~~  271 (515)
                        .+|...+.+++|+|||++++++ ..++.+++||...  .........|...           ...+..++++..++..
T Consensus       103 ~~~~~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~  180 (426)
T d1hzua2         103 IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGET--LEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVN  180 (426)
T ss_dssp             CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTT--CCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEE
T ss_pred             CCCCCcceEEeeeecCCCCEEEEeecCCCeEEEEcCCc--cceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEe
Confidence              2455566777888999987654 5789999999854  3444444444333           3445555666555544


Q ss_pred             eC-CCcEEEEEcccce--EEEEEEcCccEEEEEEcCCCcEEEEEEC-CCeEEEEeCCCCceEEEEecCCC-ccEEEEEEc
Q psy17610        272 ST-DGTCVLWDLIKST--RLIIMILPSMIMSAAYHPSEVQLITCST-NKMIDYWETCDGSIIRSLEGSDV-AAVNCVDFV  346 (515)
Q Consensus       272 ~~-d~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~i~~~d~~~~~~~~~~~~~~~-~~i~~~~~~  346 (515)
                      .. .+.+.+++.....  ..........+..+.++|++++++++.. +..+.+++..+++.+........ .......+.
T Consensus       181 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (426)
T d1hzua2         181 VKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFV  260 (426)
T ss_dssp             ETTTTEEEEEECSSSSSCEEEEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEE
T ss_pred             cCCCCeEEEEEeccccceeeEEeccCCccEeeeECCCCcEEEeeeecccceeeeecccccEEEEeccCCcccccceeeee
Confidence            43 3445555554433  3344556667899999999998887765 56789999999998887764321 112223333


Q ss_pred             CCCC--E-EEEEcCCCeEEEEEccC-------CeeeeeccCCCCCeeEEEECCCCcEEEE-------EeCCCcEEEEeCC
Q psy17610        347 DDGK--Y-FLTGGADQIVKMWMYRE-------GVPCFVGIGHAASITKIKISPDKKVIVS-------VSADGGIFLWTFP  409 (515)
Q Consensus       347 ~~~~--~-l~~~~~dg~i~i~d~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~l~~-------~~~dg~i~iw~~~  409 (515)
                      +.+.  . .+....|+.+.+|+...       ++....+.+|...+..++|+||+++|++       ++.+++|++||+.
T Consensus       261 ~~~~~~~~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~  340 (426)
T d1hzua2         261 HPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLK  340 (426)
T ss_dssp             ETTTEEEEEEECTTTCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETT
T ss_pred             cCCCCceEEeccCCCceEEEeeccccccccccceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEECC
Confidence            2222  2 22344577888877644       3677888999999999999999999995       4557899999998


Q ss_pred             CCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEe-----ecCCeEEEEecCCCeeeeeeccccc
Q psy17610        410 ELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITC-----STNKMIDYWETCDGSIIRSLEGSDV  484 (515)
Q Consensus       410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-----~~dg~v~iwd~~~~~~~~~~~~~~~  484 (515)
                      +.+.......           .........+...+.+++|||||++++..     +.+|.|+|||.+++++...+.++. 
T Consensus       341 t~~~~~~~~~-----------~~~~~~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T~k~~~~i~~~~-  408 (426)
T d1hzua2         341 NLDAKYQVLP-----------IAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDPR-  408 (426)
T ss_dssp             CTTSCCEEEC-----------HHHHHCCCSSCCCEEEEEECSSSSEEEEEECCCTTSCCEEEEEETTTTEEEEEECCTT-
T ss_pred             CCCcCeEEec-----------cchhcccCCCCccEEEEEECCCCCEEEEEEecCCCCCCeEEEEECCCCeEEEEECCCC-
Confidence            7653211100           00011122345668999999999977432     367889999999999999988764 


Q ss_pred             ceEEEEEEcCCCcEEE
Q psy17610        485 AAVNCVDFVDDGKYFL  500 (515)
Q Consensus       485 ~~v~~~~~s~~~~~l~  500 (515)
                            .++|+|++-+
T Consensus       409 ------~~tp~Gk~~~  418 (426)
T d1hzua2         409 ------LITPTGKFNV  418 (426)
T ss_dssp             ------CCSEEEEEEH
T ss_pred             ------ccCCCceEeE
Confidence                  4467777644

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.97  E-value=1.7e-27  Score=222.17  Aligned_cols=314  Identities=9%  Similarity=0.008  Sum_probs=224.6

Q ss_pred             CEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEE--E---ecCeE
Q psy17610         94 NKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRI--S---VMNMI  168 (515)
Q Consensus        94 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~--~---~~~~~  168 (515)
                      -++++...||+|++||+.+++.+.. +..| ..+..++|||||+++++++.|+++++||+.+++.....  .   +|...
T Consensus        33 ~~~V~~~~dg~v~vwD~~t~~~~~~-l~~g-~~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~  110 (426)
T d1hzua2          33 LFSVTLRDAGQIALVDGDSKKIVKV-IDTG-YAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSV  110 (426)
T ss_dssp             EEEEEETTTTEEEEEETTTCSEEEE-EECC-SSEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEE
T ss_pred             EEEEEEcCCCEEEEEECCCCcEEEE-EeCC-CCeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcce
Confidence            3456777899999999999765554 4445 45899999999999999999999999999998754433  2   45556


Q ss_pred             EEEEEEeeCCCEEEEE-eCCCeEEEEecCCCceEEEecCCCC-----------CCeEEEEEcCCCCEEEEecC-CCcEEE
Q psy17610        169 CACIVFTYDGKAILSG-WNDGFIRCFTPQSGKLKFIIPNAHN-----------RGVTALAITQDGTRLLSGGG-EGQVRI  235 (515)
Q Consensus       169 v~~~~~~~~~~~l~~~-~~dg~i~~~~~~~~~~~~~~~~~~~-----------~~v~~~~~~~~~~~l~~~~~-d~~i~i  235 (515)
                      +.+++|+|||++++++ ..++.+.+||..+++..... ..|.           .....+.+++++..++.... .+.+.+
T Consensus       111 ~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~  189 (426)
T d1hzua2         111 ESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIV-STRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLL  189 (426)
T ss_dssp             EECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEE-ECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEE
T ss_pred             EEeeeecCCCCEEEEeecCCCeEEEEcCCccceeEEe-eccCCCccceeecCCCceeEEEECCCCCEEEEecCCCCeEEE
Confidence            6777888999987554 57899999999999887766 3333           33445566666665554333 345555


Q ss_pred             EEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeC-CCcEEEEEcccceEEEEEEcCc---cEEEEEEcCCCc--EE
Q psy17610        236 WKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST-DGTCVLWDLIKSTRLIIMILPS---MIMSAAYHPSEV--QL  309 (515)
Q Consensus       236 w~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~---~~~~~~~~~~~~--~l  309 (515)
                      ++..... ........+...+..+.++|++++++++.. +..+.+++..+++.........   ......+.+.+.  ..
T Consensus       190 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (426)
T d1hzua2         190 VNYKDID-NLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVW  268 (426)
T ss_dssp             EECSSSS-SCEEEEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEEETTTEEEE
T ss_pred             EEecccc-ceeeEEeccCCccEeeeECCCCcEEEeeeecccceeeeecccccEEEEeccCCcccccceeeeecCCCCceE
Confidence            5543222 222334456778899999999998887765 5678999999998887776442   222222222222  22


Q ss_pred             E-EEECCCeEEEEeCCC-------CceEEEEecCCCccEEEEEEcCCCCEEEE-------EcCCCeEEEEEccCCeeeee
Q psy17610        310 I-TCSTNKMIDYWETCD-------GSIIRSLEGSDVAAVNCVDFVDDGKYFLT-------GGADQIVKMWMYREGVPCFV  374 (515)
Q Consensus       310 ~-~~~~~~~i~~~d~~~-------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-------~~~dg~i~i~d~~~~~~~~~  374 (515)
                      . ....++.+.+|+...       ++....+..+. ..+..++|+|++++|++       +..+++|++||+++++...+
T Consensus       269 ~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~-~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~  347 (426)
T d1hzua2         269 STSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQG-GGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQ  347 (426)
T ss_dssp             EEECTTTCEEEEEECCTTTCTTTBTSEEEEEECSS-SCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTTSCCE
T ss_pred             EeccCCCceEEEeeccccccccccceEeEEEecCC-CceeEEEcCCCCceEEEeecCCCCcccCCEEEEEECCCCCcCeE
Confidence            2 223467777777544       46778888875 77889999999999995       45578999999998876544


Q ss_pred             c---------cCCCCCeeEEEECCCCcEEEEE-----eCCCcEEEEeCCCCc
Q psy17610        375 G---------IGHAASITKIKISPDKKVIVSV-----SADGGIFLWTFPELE  412 (515)
Q Consensus       375 ~---------~~~~~~i~~~~~~~~~~~l~~~-----~~dg~i~iw~~~~~~  412 (515)
                      +         ..|...+.+++|||||++++.+     +.++.|++||..+.+
T Consensus       348 ~~~~~~~~~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T~k  399 (426)
T d1hzua2         348 VLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLK  399 (426)
T ss_dssp             EECHHHHHCCCSSCCCEEEEEECSSSSEEEEEECCCTTSCCEEEEEETTTTE
T ss_pred             EeccchhcccCCCCccEEEEEECCCCCEEEEEEecCCCCCCeEEEEECCCCe
Confidence            3         3456679999999999977543     357889999988764

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.96  E-value=6.7e-25  Score=194.74  Aligned_cols=270  Identities=13%  Similarity=0.134  Sum_probs=217.2

Q ss_pred             EEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEe-cCCcEEEEeCCCCceeEEEEecCeEEEEEEEe
Q psy17610         97 FVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATC-SKNDIRIWSVRTLNELLRISVMNMICACIVFT  175 (515)
Q Consensus        97 ~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~  175 (515)
                      ++++.|++|.+||+++++.+..+ . ....+..++|+|||++|++++ .++.|++||+.+++.+..+..+.. +..+.|+
T Consensus         6 V~~~~~~~v~v~D~~t~~~~~~i-~-~g~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~~-~~~~~~~   82 (301)
T d1l0qa2           6 IANSESDNISVIDVTSNKVTATI-P-VGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSS-PQGVAVS   82 (301)
T ss_dssp             EEETTTTEEEEEETTTTEEEEEE-E-CSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSS-EEEEEEC
T ss_pred             EEECCCCEEEEEECCCCeEEEEE-E-CCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeecccc-ccccccc
Confidence            34567899999999997555444 3 335578999999999886554 589999999999999998887665 4789999


Q ss_pred             eCCCEEEE-EeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEE-EecCCCcEEEEEccCCceeeEEeecccc
Q psy17610        176 YDGKAILS-GWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLL-SGGGEGQVRIWKLTRESQSLQCVLKEHT  253 (515)
Q Consensus       176 ~~~~~l~~-~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~iw~~~~~~~~~~~~~~~~~  253 (515)
                      +++..+++ +..++.+.+|+..+++....+  .+.....++.|+|+++.++ ++..++.+.+|+...  ......+.. .
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~  157 (301)
T d1l0qa2          83 PDGKQVYVTNMASSTLSVIDTTSNTVAGTV--KTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVT--KAVINTVSV-G  157 (301)
T ss_dssp             TTSSEEEEEETTTTEEEEEETTTTEEEEEE--ECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTT--TEEEEEEEC-C
T ss_pred             cccccccccccccceeeecccccceeeeec--cccccceEEEeecCCCeeeeeeccccceeeeeccc--cceeeeccc-C
Confidence            99986665 556778999999999888777  3456778999999998775 556678899999853  333434433 3


Q ss_pred             CceEEEEEecCCCEEEEEeCC-CcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEEC---CCeEEEEeCCCCceE
Q psy17610        254 SSVSVIQIKSDSKEAMSASTD-GTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCST---NKMIDYWETCDGSII  329 (515)
Q Consensus       254 ~~v~~~~~~~~~~~l~~~~~d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~i~~~d~~~~~~~  329 (515)
                      ..+..+.++|++..++++..+ +.+.+|+....+..........+..+++++++..++++..   ++.|.+||+.+++.+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~~~~  237 (301)
T d1l0qa2         158 RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKIT  237 (301)
T ss_dssp             SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEE
T ss_pred             CCceEEEeeccccceeeecccccccccccccceeeeecccccCCcceeeccccccccccccccceeeeeeeeecCCCeEE
Confidence            457889999999988887765 6677888888888888888888999999999998876654   468999999999999


Q ss_pred             EEEecCCCccEEEEEEcCCCCEE-EEEcCCCeEEEEEccCCeeeeecc
Q psy17610        330 RSLEGSDVAAVNCVDFVDDGKYF-LTGGADQIVKMWMYREGVPCFVGI  376 (515)
Q Consensus       330 ~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~  376 (515)
                      ..+..+  ..+.+++|+|||++| ++++.++.|++||+++++.+.++.
T Consensus       238 ~~~~~~--~~~~~va~spdg~~l~va~~~~~~i~v~D~~t~~~~~~~~  283 (301)
T d1l0qa2         238 ARIPVG--PDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMA  283 (301)
T ss_dssp             EEEECC--SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred             EEEcCC--CCEEEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEEEe
Confidence            888765  567899999999976 577789999999999998887764

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.95  E-value=2.5e-24  Score=190.94  Aligned_cols=271  Identities=13%  Similarity=0.110  Sum_probs=214.5

Q ss_pred             EEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEE-EecCCCcEEEEEccCCceeeEEeeccccCceEEEE
Q psy17610        182 LSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLL-SGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQ  260 (515)
Q Consensus       182 ~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~  260 (515)
                      ++.+.++.|.+||+++++.+..+.  ....+..++|+|+|++|+ +++.++.|++||+.  +......+..+. .+..+.
T Consensus         6 V~~~~~~~v~v~D~~t~~~~~~i~--~g~~p~~va~spdG~~l~v~~~~~~~i~v~d~~--t~~~~~~~~~~~-~~~~~~   80 (301)
T d1l0qa2           6 IANSESDNISVIDVTSNKVTATIP--VGSNPMGAVISPDGTKVYVANAHSNDVSIIDTA--TNNVIATVPAGS-SPQGVA   80 (301)
T ss_dssp             EEETTTTEEEEEETTTTEEEEEEE--CSSSEEEEEECTTSSEEEEEEGGGTEEEEEETT--TTEEEEEEECSS-SEEEEE
T ss_pred             EEECCCCEEEEEECCCCeEEEEEE--CCCCceEEEEeCCCCEEEEEECCCCEEEEEECC--CCceeeeeeccc-cccccc
Confidence            456788999999999999998884  335678999999999874 66788999999995  445555666655 468899


Q ss_pred             EecCCCEEEE-EeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEE-CCCeEEEEeCCCCceEEEEecCCCc
Q psy17610        261 IKSDSKEAMS-ASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCS-TNKMIDYWETCDGSIIRSLEGSDVA  338 (515)
Q Consensus       261 ~~~~~~~l~~-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~  338 (515)
                      +++++..++. +..++.+.+|+..+++....+........+.++|++..++... .++.+.+|+..+.+....+...  .
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  158 (301)
T d1l0qa2          81 VSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG--R  158 (301)
T ss_dssp             ECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC--S
T ss_pred             cccccccccccccccceeeecccccceeeeeccccccceEEEeecCCCeeeeeeccccceeeeeccccceeeecccC--C
Confidence            9999987665 4556789999999999999999999999999999999876554 5788999999999999888766  4


Q ss_pred             cEEEEEEcCCCCEEEEEcCC-CeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeC---CCcEEEEeCCCCcCc
Q psy17610        339 AVNCVDFVDDGKYFLTGGAD-QIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSA---DGGIFLWTFPELEDD  414 (515)
Q Consensus       339 ~i~~~~~~~~~~~l~~~~~d-g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---dg~i~iw~~~~~~~~  414 (515)
                      .+..++++|+++.+++++.+ +.+.+|+....+....... ...+..++++++++.++.+..   ++.|.+||+.+.+..
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~~~~  237 (301)
T d1l0qa2         159 SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKV-EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKIT  237 (301)
T ss_dssp             SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-SSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEE
T ss_pred             CceEEEeeccccceeeecccccccccccccceeeeecccc-cCCcceeeccccccccccccccceeeeeeeeecCCCeEE
Confidence            67889999999988777654 6777888877766665544 455788999999998876643   467999998765310


Q ss_pred             cCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEE-EEeecCCeEEEEecCCCeeeeeecc
Q psy17610        415 VGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQL-ITCSTNKMIDYWETCDGSIIRSLEG  481 (515)
Q Consensus       415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l-~~~~~dg~v~iwd~~~~~~~~~~~~  481 (515)
                                           ........+..++|+|||++| ++++.++.|++||+++++++.++..
T Consensus       238 ---------------------~~~~~~~~~~~va~spdg~~l~va~~~~~~i~v~D~~t~~~~~~~~v  284 (301)
T d1l0qa2         238 ---------------------ARIPVGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMAV  284 (301)
T ss_dssp             ---------------------EEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred             ---------------------EEEcCCCCEEEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEEEeC
Confidence                                 001122347899999999987 5667799999999999999988864

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.94  E-value=1.5e-25  Score=203.28  Aligned_cols=311  Identities=10%  Similarity=0.004  Sum_probs=223.4

Q ss_pred             EEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEe-cCeEEEEEEEeeCCCEEE-EEeCCCeEEEEecCCCceEEEecCC
Q psy17610        130 LQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISV-MNMICACIVFTYDGKAIL-SGWNDGFIRCFTPQSGKLKFIIPNA  207 (515)
Q Consensus       130 ~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~-~~~~dg~i~~~~~~~~~~~~~~~~~  207 (515)
                      ++|+++++++++++.+++|.+||+++++.+.++.. +...+.+++|+|||++++ ++..++.|.+||+.+++....+...
T Consensus         2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~~   81 (346)
T d1jmxb_           2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLS   81 (346)
T ss_dssp             CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESC
T ss_pred             ccCCCCCcEEEEEcCCCEEEEEECCCCCEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeeccc
Confidence            57899999999999999999999999999998874 445678999999999875 4557899999999999988776432


Q ss_pred             CC-----CCeEEEEEcCCCCEEEEec------------CCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEE
Q psy17610        208 HN-----RGVTALAITQDGTRLLSGG------------GEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMS  270 (515)
Q Consensus       208 ~~-----~~v~~~~~~~~~~~l~~~~------------~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  270 (515)
                      ..     ..+..++|+|||+++++++            .++.+.+|+..................+..+.+++++..+++
T Consensus        82 ~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (346)
T d1jmxb_          82 SVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVA  161 (346)
T ss_dssp             CSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEEE
T ss_pred             ccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeeeccCceEEEEecCCCEEEEe
Confidence            21     2356789999999988765            366788888754332221111222344555666677665543


Q ss_pred             EeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEEC-CCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCC
Q psy17610        271 ASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCST-NKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDG  349 (515)
Q Consensus       271 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~  349 (515)
                         ++.+.+|++.+++....+........+.++|++..++.... ++.+.+++.                  ...+.+..
T Consensus       162 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~  220 (346)
T d1jmxb_         162 ---GPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYT------------------IARFKDDK  220 (346)
T ss_dssp             ---SSSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEE------------------EEEC----
T ss_pred             ---CCcceEEEccCCCEEEEEecCCCccceEEeccccEEEEEecCCCceEeeee------------------eeeeccCc
Confidence               24689999999999888887777777778888776654433 333333321                  12223344


Q ss_pred             CEEEEEcCCCeEEEEEccCCeeee-eccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecc
Q psy17610        350 KYFLTGGADQIVKMWMYREGVPCF-VGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRS  428 (515)
Q Consensus       350 ~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~  428 (515)
                      ..++++..++.+.+|+..++.... ....|...+..+.+++++.+++.... +.+.+||....+.               
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~v~d~~~~~~---------------  284 (346)
T d1jmxb_         221 QDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVL-NRLAKYDLKQRKL---------------  284 (346)
T ss_dssp             ---CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEEE-SEEEEEETTTTEE---------------
T ss_pred             eeEeeccCCceEEEEECCCCceEEEEeecccceeEEEEEeCCCCEEEEecC-CeEEEEECCCCcE---------------
Confidence            455666667789999998876544 44578888999999998888877654 5799999876531               


Q ss_pred             cccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccc
Q psy17610        429 TARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSD  483 (515)
Q Consensus       429 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~  483 (515)
                            .....+...+.+++|+|||++|++++.|+.|++||+++++.+.++..+.
T Consensus       285 ------~~~~~~~~~~~~va~s~DG~~l~v~~~d~~v~v~D~~t~~~i~~i~~p~  333 (346)
T d1jmxb_         285 ------IKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPG  333 (346)
T ss_dssp             ------EEEEECSSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECSS
T ss_pred             ------EEEEcCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECccCCEEEEEECCC
Confidence                  0111123458899999999999999999999999999999998887543

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.94  E-value=6e-25  Score=198.37  Aligned_cols=273  Identities=13%  Similarity=0.062  Sum_probs=204.5

Q ss_pred             CEEEEEecCceEEEEECCCCceeEEeec-cCccCeEEEEeCCCCcEEEEE-ecCCcEEEEeCCCCceeEEEEecCe----
Q psy17610         94 NKVFVGTVNCEIFLIDMNSGFTLTLVNT-CHTSAIYDLQFPVNFSSVFAT-CSKNDIRIWSVRTLNELLRISVMNM----  167 (515)
Q Consensus        94 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~~~-~~d~~i~iw~~~~~~~~~~~~~~~~----  167 (515)
                      +|+++++.|++|.+||+++++.+..+.. .+...+.+++|+|||++++++ +.++.|.+||+.+++.+..+..+..    
T Consensus         2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~   81 (337)
T d1pbyb_           2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV   81 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred             eEEEEEcCCCEEEEEECCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCcccc
Confidence            5899999999999999999765554432 234567899999999988655 5689999999999999988875432    


Q ss_pred             -EEEEEEEeeCCCEEEEEe------------CCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEE
Q psy17610        168 -ICACIVFTYDGKAILSGW------------NDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVR  234 (515)
Q Consensus       168 -~v~~~~~~~~~~~l~~~~------------~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~  234 (515)
                       .+..++|+|++++++++.            .+..+.+||..+++....+.  +...+..++|+|+|+++++++.+  +.
T Consensus        82 ~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~--~~  157 (337)
T d1pbyb_          82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFE--APRQITMLAWARDGSKLYGLGRD--LH  157 (337)
T ss_dssp             ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEE--CCSSCCCEEECTTSSCEEEESSS--EE
T ss_pred             cceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEecc--ccCCceEEEEcCCCCEEEEEcCC--cc
Confidence             235789999999998776            35788999999999888773  45668899999999999988754  77


Q ss_pred             EEEccCCceeeEEeeccccCceEEEEEecC------------------------CCEEEEEeCCCcEEEEEcccceEEEE
Q psy17610        235 IWKLTRESQSLQCVLKEHTSSVSVIQIKSD------------------------SKEAMSASTDGTCVLWDLIKSTRLII  290 (515)
Q Consensus       235 iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~------------------------~~~l~~~~~d~~i~iwd~~~~~~~~~  290 (515)
                      +||.....  ....+..+... ....+.++                        .........++.+.+|+..++.....
T Consensus       158 ~~d~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (337)
T d1pbyb_         158 VMDPEAGT--LVEDKPIQSWE-AETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMR  234 (337)
T ss_dssp             EEETTTTE--EEEEECSTTTT-TTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEE
T ss_pred             eeeeecCc--EEEEeecCCcc-ccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcEEEE
Confidence            89985432  23332221110 00111111                        11112223345688999988775543


Q ss_pred             E--EcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccC
Q psy17610        291 M--ILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYRE  368 (515)
Q Consensus       291 ~--~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~  368 (515)
                      .  ........+.++|++.+++..  ++.+++||+.+++.+..+...  ..+.+++|+|||++|++++.++.|++||.++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~~~~~~~~~~~--~~~~~~~~s~dG~~l~v~~~~~~i~v~D~~t  310 (337)
T d1pbyb_         235 EVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP--HSYYSVNVSTDGSTVWLGGALGDLAAYDAET  310 (337)
T ss_dssp             EEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS--SCCCEEEECTTSCEEEEESBSSEEEEEETTT
T ss_pred             EecCCCcceEEEEecccceEEEEc--cccEEEEECCCCcEEEEEcCC--CCEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence            3  344567888999999998776  478999999999999988765  5678999999999999999999999999999


Q ss_pred             CeeeeeccC
Q psy17610        369 GVPCFVGIG  377 (515)
Q Consensus       369 ~~~~~~~~~  377 (515)
                      ++.+.++..
T Consensus       311 ~~~v~~i~~  319 (337)
T d1pbyb_         311 LEKKGQVDL  319 (337)
T ss_dssp             CCEEEEEEC
T ss_pred             CcEEEEEEC
Confidence            988877653

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.94  E-value=1.4e-24  Score=195.94  Aligned_cols=275  Identities=9%  Similarity=-0.046  Sum_probs=208.8

Q ss_pred             CEEEEEeCCCeEEEEecCCCceEEEecCC-CCCCeEEEEEcCCCCEE-EEecCCCcEEEEEccCCceeeEEeeccc----
Q psy17610        179 KAILSGWNDGFIRCFTPQSGKLKFIIPNA-HNRGVTALAITQDGTRL-LSGGGEGQVRIWKLTRESQSLQCVLKEH----  252 (515)
Q Consensus       179 ~~l~~~~~dg~i~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l-~~~~~d~~i~iw~~~~~~~~~~~~~~~~----  252 (515)
                      +++++++.|++|.+||+++++.+..++.. +...+.+++|+|||+++ ++++.++.|.+||+.+.  +....+..+    
T Consensus         2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~--~~~~~~~~~~~~~   79 (337)
T d1pbyb_           2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTG--ETLGRIDLSTPEE   79 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTC--CEEEEEECCBTTE
T ss_pred             eEEEEEcCCCEEEEEECCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCC--cEEEEEecCCCcc
Confidence            47999999999999999999999888543 34567899999999987 46678999999999643  344444333    


Q ss_pred             -cCceEEEEEecCCCEEEEEe------------CCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEE
Q psy17610        253 -TSSVSVIQIKSDSKEAMSAS------------TDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMID  319 (515)
Q Consensus       253 -~~~v~~~~~~~~~~~l~~~~------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~  319 (515)
                       ...+..++|+|++++++++.            .+..+.+||..+++....+.....+..++++|+++++++++.  .+.
T Consensus        80 ~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~--~~~  157 (337)
T d1pbyb_          80 RVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGR--DLH  157 (337)
T ss_dssp             EEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEESS--SEE
T ss_pred             cccceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEeccccCCceEEEEcCCCCEEEEEcC--Ccc
Confidence             33456789999999998776            357889999999999999998888999999999999998864  467


Q ss_pred             EEeCCCCceEEEEecCCCccEEEEEEcCCCC------------------------EEEEEcCCCeEEEEEccCCeeee-e
Q psy17610        320 YWETCDGSIIRSLEGSDVAAVNCVDFVDDGK------------------------YFLTGGADQIVKMWMYREGVPCF-V  374 (515)
Q Consensus       320 ~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~------------------------~l~~~~~dg~i~i~d~~~~~~~~-~  374 (515)
                      +||..+++....+..+...  ....++|++.                        ....+..++.+.+|+..++.... .
T Consensus       158 ~~d~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (337)
T d1pbyb_         158 VMDPEAGTLVEDKPIQSWE--AETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMRE  235 (337)
T ss_dssp             EEETTTTEEEEEECSTTTT--TTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEE
T ss_pred             eeeeecCcEEEEeecCCcc--ccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcEEEEE
Confidence            8999999888877653211  1111222211                        11122334568899988876544 3


Q ss_pred             ccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCc
Q psy17610        375 GIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEV  454 (515)
Q Consensus       375 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~  454 (515)
                      +..+...+..++++|++.+++.+  ++.+++||+.+....                     ....+...+.+++|+|||+
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~~~~~---------------------~~~~~~~~~~~~~~s~dG~  292 (337)
T d1pbyb_         236 VRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASI---------------------KRVPLPHSYYSVNVSTDGS  292 (337)
T ss_dssp             EEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEE---------------------EEEECSSCCCEEEECTTSC
T ss_pred             ecCCCcceEEEEecccceEEEEc--cccEEEEECCCCcEE---------------------EEEcCCCCEEEEEECCCCC
Confidence            45677788899999999988766  578999999765311                     1112334578999999999


Q ss_pred             EEEEeecCCeEEEEecCCCeeeeeeccc
Q psy17610        455 QLITCSTNKMIDYWETCDGSIIRSLEGS  482 (515)
Q Consensus       455 ~l~~~~~dg~v~iwd~~~~~~~~~~~~~  482 (515)
                      +|++++.++.|++||.++++.+.++..+
T Consensus       293 ~l~v~~~~~~i~v~D~~t~~~v~~i~~~  320 (337)
T d1pbyb_         293 TVWLGGALGDLAAYDAETLEKKGQVDLP  320 (337)
T ss_dssp             EEEEESBSSEEEEEETTTCCEEEEEECG
T ss_pred             EEEEEeCCCcEEEEECCCCcEEEEEECC
Confidence            9999999999999999999999887653

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.94  E-value=4.9e-25  Score=199.74  Aligned_cols=302  Identities=8%  Similarity=-0.028  Sum_probs=218.3

Q ss_pred             EEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEe-cCCcEEEEeCCCCceeEEEEec
Q psy17610         87 LQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATC-SKNDIRIWSVRTLNELLRISVM  165 (515)
Q Consensus        87 ~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-~d~~i~iw~~~~~~~~~~~~~~  165 (515)
                      ++|++++++|++++.+++|.+||+++++.+..+...|...+.+++|+|||+++++++ .++.|.+||+.+++.+..+...
T Consensus         2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~~   81 (346)
T d1jmxb_           2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLS   81 (346)
T ss_dssp             CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESC
T ss_pred             ccCCCCCcEEEEEcCCCEEEEEECCCCCEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeeccc
Confidence            478999999999999999999999997555544445677789999999999986665 5899999999999988877633


Q ss_pred             C------eEEEEEEEeeCCCEEEEEe------------CCCeEEEEecCCCceEEEecC-CCCCCeEEEEEcCCCCEEEE
Q psy17610        166 N------MICACIVFTYDGKAILSGW------------NDGFIRCFTPQSGKLKFIIPN-AHNRGVTALAITQDGTRLLS  226 (515)
Q Consensus       166 ~------~~v~~~~~~~~~~~l~~~~------------~dg~i~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~  226 (515)
                      .      ..+..++|+|||++++++.            .++.+.+|+..+++....+.. .....+..+.+++++..++.
T Consensus        82 ~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (346)
T d1jmxb_          82 SVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVA  161 (346)
T ss_dssp             CSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEEE
T ss_pred             ccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeeeccCceEEEEecCCCEEEEe
Confidence            2      2245789999999988765            467788999887765433211 12344566777777776654


Q ss_pred             ecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEe-CCCcEEEEEcccceEEEEEEcCccEEEEEEcCC
Q psy17610        227 GGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAS-TDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPS  305 (515)
Q Consensus       227 ~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  305 (515)
                      +   +.+.+|+..  +......+..+. ....+.++|++..++... .++.+.+++..                ..+.+.
T Consensus       162 ~---~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~  219 (346)
T d1jmxb_         162 G---PDIYKMDVK--TGKYTVALPLRN-WNRKGYSAPDVLYFWPHQSPRHEFSMLYTI----------------ARFKDD  219 (346)
T ss_dssp             S---SSEEEECTT--TCCEEEEECSTT-CCCTTBCCCBCCCCCCCCCTTCEEEEEEEE----------------EEC---
T ss_pred             C---CcceEEEcc--CCCEEEEEecCC-CccceEEeccccEEEEEecCCCceEeeeee----------------eeeccC
Confidence            3   458899985  344444444433 345566778877665443 34555554421                112233


Q ss_pred             CcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEE
Q psy17610        306 EVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKI  385 (515)
Q Consensus       306 ~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~  385 (515)
                      ...+.++..+..+.+||..++.........+...+..+.+++++.+++... ++.+.+||..+++.+..+. +...+.++
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~v~d~~~~~~~~~~~-~~~~~~~v  297 (346)
T d1jmxb_         220 KQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQRKLIKAAN-LDHTYYCV  297 (346)
T ss_dssp             ----CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-ESEEEEEETTTTEEEEEEE-CSSCCCEE
T ss_pred             ceeEeeccCCceEEEEECCCCceEEEEeecccceeEEEEEeCCCCEEEEec-CCeEEEEECCCCcEEEEEc-CCCCEEEE
Confidence            344555566778999999998877766555557788889999888887766 4589999999998887764 45679999


Q ss_pred             EECCCCcEEEEEeCCCcEEEEeCCCCc
Q psy17610        386 KISPDKKVIVSVSADGGIFLWTFPELE  412 (515)
Q Consensus       386 ~~~~~~~~l~~~~~dg~i~iw~~~~~~  412 (515)
                      +|+|||++|++++.|+.|++||+.+.+
T Consensus       298 a~s~DG~~l~v~~~d~~v~v~D~~t~~  324 (346)
T d1jmxb_         298 AFDKKGDKLYLGGTFNDLAVFNPDTLE  324 (346)
T ss_dssp             EECSSSSCEEEESBSSEEEEEETTTTE
T ss_pred             EEcCCCCEEEEEeCCCcEEEEECccCC
Confidence            999999999999999999999998765

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.92  E-value=3.1e-21  Score=176.49  Aligned_cols=302  Identities=9%  Similarity=0.006  Sum_probs=218.8

Q ss_pred             ecCCCcEEEEEEecCCCEEEEEe-----cCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec--------
Q psy17610         78 LKDDSGISSLQYNPVNNKVFVGT-----VNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS--------  144 (515)
Q Consensus        78 ~~~~~~v~~~~~s~~~~~l~~~~-----~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~--------  144 (515)
                      ..+.+++.+++++|||+.+++..     ..+.|++||.++++.+.. +..+..  ..++|+|||++++++..        
T Consensus        17 ~~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~-~~~~~~--~~~a~SpDG~~l~va~~~~~~~~~~   93 (373)
T d2madh_          17 GAADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGH-VNGGFL--PNPVAAHSGSEFALASTSFSRIAKG   93 (373)
T ss_pred             ccCCCCccccccCCCCCEEEEEcccccCCCceEEEEECCCCCEEEE-EeCCCC--ccEEEcCCCCEEEEEeecCCccccc
Confidence            35789999999999999987752     346799999999876655 444443  37999999999998864        


Q ss_pred             --CCcEEEEeCCCCceeEEEEecCeEE-------EEEEEeeCCCEEEEEe--CCCeEEEEecCCCceEEEecCCCCCCeE
Q psy17610        145 --KNDIRIWSVRTLNELLRISVMNMIC-------ACIVFTYDGKAILSGW--NDGFIRCFTPQSGKLKFIIPNAHNRGVT  213 (515)
Q Consensus       145 --d~~i~iw~~~~~~~~~~~~~~~~~v-------~~~~~~~~~~~l~~~~--~dg~i~~~~~~~~~~~~~~~~~~~~~v~  213 (515)
                        ++.|.+||..+++.+..+..+....       ..+.|+++++.++...  .++.+.+|+....+.....     ....
T Consensus        94 ~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~-----~~~~  168 (373)
T d2madh_          94 KRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSDDQLL-----SSPT  168 (373)
T ss_pred             ccceEEEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccCCeEEEEe-----ccce
Confidence              5779999999999988877655443       4578899998776554  4567889998887765444     3456


Q ss_pred             EEEEcCCCCEE-EEecCCCcEEEEEccCCceeeEEee----ccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEE
Q psy17610        214 ALAITQDGTRL-LSGGGEGQVRIWKLTRESQSLQCVL----KEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRL  288 (515)
Q Consensus       214 ~~~~~~~~~~l-~~~~~d~~i~iw~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~  288 (515)
                      ++.++|+++.+ ++.+.|+.+.+|+............    .+.........+.+++ .++..+.++.+.+|+.......
T Consensus       169 ~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~  247 (373)
T d2madh_         169 CYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSG-RIVWPVYSGKILQADISAAGAT  247 (373)
T ss_pred             eEEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEEeeeccccCccceeeeEEECCCc-eEEEecCCceEEEEEcCCCeEE
Confidence            88899988755 6788999999999854332222111    1112223344455554 4556667889999988766543


Q ss_pred             EEEE-------------cCccEEEEEEcCCCcEEE----------EEECCCeEEEEeCCCCceEEEEecCCCccEEEEEE
Q psy17610        289 IIMI-------------LPSMIMSAAYHPSEVQLI----------TCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDF  345 (515)
Q Consensus       289 ~~~~-------------~~~~~~~~~~~~~~~~l~----------~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~  345 (515)
                      ....             .+.....+++++++..++          ....++.+.+||..+++.+..+...  ..+..++|
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~~~~--~~~~~~a~  325 (373)
T d2madh_         248 NKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLG--HDVDAISV  325 (373)
T ss_pred             EEEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECCCCcEEEEecCC--CCeeEEEE
Confidence            2221             122334456666665544          4455678999999999999988755  56889999


Q ss_pred             cCCCCE--EEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCC
Q psy17610        346 VDDGKY--FLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPD  390 (515)
Q Consensus       346 ~~~~~~--l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~  390 (515)
                      +|||+.  +++++.|+.|++||+.+++.+..+..+....+.+++.++
T Consensus       326 spDG~~~l~vt~~~d~~v~v~D~~tg~~~~~~~~~g~~P~~l~~~~~  372 (373)
T d2madh_         326 AQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELGSGPQVLSVMNE  372 (373)
T ss_pred             CCCCCEEEEEEeCCCCeEEEEECCCCCEEEEECCCCCCCcEEEEecC
Confidence            999984  467889999999999999999999888888888887654

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.91  E-value=1.5e-20  Score=171.75  Aligned_cols=321  Identities=8%  Similarity=-0.069  Sum_probs=220.6

Q ss_pred             ccCccCeEEEEeCCCCcEEEEEec-----CCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEe----------
Q psy17610        121 TCHTSAIYDLQFPVNFSSVFATCS-----KNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGW----------  185 (515)
Q Consensus       121 ~~h~~~v~~~~~~~~~~~l~~~~~-----d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------  185 (515)
                      ..+.+++..++++|||+.+++...     .+.+.+||..+++.+.++..+..+  .++|+|||++|+++.          
T Consensus        17 ~~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~~~~~--~~a~SpDG~~l~va~~~~~~~~~~~   94 (373)
T d2madh_          17 GAADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGK   94 (373)
T ss_pred             ccCCCCccccccCCCCCEEEEEcccccCCCceEEEEECCCCCEEEEEeCCCCc--cEEEcCCCCEEEEEeecCCcccccc
Confidence            357889999999999999887632     467999999999999988766544  689999999999875          


Q ss_pred             CCCeEEEEecCCCceEEEecCCCCCC-------eEEEEEcCCCCEEEEec--CCCcEEEEEccCCceeeEEeeccccCce
Q psy17610        186 NDGFIRCFTPQSGKLKFIIPNAHNRG-------VTALAITQDGTRLLSGG--GEGQVRIWKLTRESQSLQCVLKEHTSSV  256 (515)
Q Consensus       186 ~dg~i~~~~~~~~~~~~~~~~~~~~~-------v~~~~~~~~~~~l~~~~--~d~~i~iw~~~~~~~~~~~~~~~~~~~v  256 (515)
                      .++.|.+||..+++....+. .+...       ...+.|+++++.++...  .++.+.+|+....  ..    ..+....
T Consensus        95 ~~~~v~v~D~~t~~~~~~~~-~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~--~~----~~~~~~~  167 (373)
T d2madh_          95 RTDYVEVFDPVTFLPIADIE-LPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGS--SD----DQLLSSP  167 (373)
T ss_pred             cceEEEEEECCCCcEEEEEe-cCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccCC--eE----EEEeccc
Confidence            35789999999999887763 33332       24578888888766543  4567888887432  22    2233446


Q ss_pred             EEEEEecCCCEE-EEEeCCCcEEEEEcccceEEEEEEcCc-------cEEEEEEcCCCcEEEEEECCCeEEEEeCCCCce
Q psy17610        257 SVIQIKSDSKEA-MSASTDGTCVLWDLIKSTRLIIMILPS-------MIMSAAYHPSEVQLITCSTNKMIDYWETCDGSI  328 (515)
Q Consensus       257 ~~~~~~~~~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~-------~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~  328 (515)
                      .++.++|+++.+ ++.+.|+.+.+|+....+.........       ......+.+++. ++..+.++.+.+|+......
T Consensus       168 ~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~  246 (373)
T d2madh_         168 TCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGR-IVWPVYSGKILQADISAAGA  246 (373)
T ss_pred             eeEEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEEeeeccccCccceeeeEEECCCce-EEEecCCceEEEEEcCCCeE
Confidence            678899998765 678889999999998877665543221       133444555554 44556788899999887654


Q ss_pred             EEEEec-CCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEe
Q psy17610        329 IRSLEG-SDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWT  407 (515)
Q Consensus       329 ~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~  407 (515)
                      ...... ..........+.|.+...+..+.|+...                      ..+.+++..+++...++.+.+||
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~----------------------~~~~~~~~~~~~~~~~~~v~~~d  304 (373)
T d2madh_         247 TNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGI----------------------YLLTSEQSAWKLHAAAKEVTSVT  304 (373)
T ss_pred             EEEEeeccccCcEEeeeeccCcceeeEEecCCCeE----------------------EEecCCCceEEeecCCCeEEEEE
Confidence            332221 1113334444555444444444443221                      12334556677777888999999


Q ss_pred             CCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcE--EEEeecCCeEEEEecCCCeeeeeecccccc
Q psy17610        408 FPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQ--LITCSTNKMIDYWETCDGSIIRSLEGSDVA  485 (515)
Q Consensus       408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~--l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~  485 (515)
                      ..+.+..                     ....+...+..++|+|||+.  +++++.|+.|++||+.+++.++++..+. .
T Consensus       305 ~~t~~~~---------------------~~~~~~~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~~~~~~~g-~  362 (373)
T d2madh_         305 GLVGQTS---------------------SQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELG-S  362 (373)
T ss_pred             CCCCcEE---------------------EEecCCCCeeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEECCCC-C
Confidence            8765421                     11123355889999999984  4678899999999999999999998775 5


Q ss_pred             eEEEEEEcCC
Q psy17610        486 AVNCVDFVDD  495 (515)
Q Consensus       486 ~v~~~~~s~~  495 (515)
                      ..+.+++.++
T Consensus       363 ~P~~l~~~~~  372 (373)
T d2madh_         363 GPQVLSVMNE  372 (373)
T ss_pred             CCcEEEEecC
Confidence            6677776543

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.90  E-value=3.3e-21  Score=174.97  Aligned_cols=296  Identities=13%  Similarity=0.085  Sum_probs=210.0

Q ss_pred             cEEEEEEecCCCEEEEEe-----cCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec----------CCc
Q psy17610         83 GISSLQYNPVNNKVFVGT-----VNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS----------KND  147 (515)
Q Consensus        83 ~v~~~~~s~~~~~l~~~~-----~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~----------d~~  147 (515)
                      ++...+.+||++.+++..     .++.|++||..+++.+..+ ..+  ....++|+|||++|++++.          ++.
T Consensus         3 p~~~~a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~~-~~g--~~~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~   79 (355)
T d2bbkh_           3 PRILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMI-DGG--FLPNPVVADDGSFIAHASTVFSRIARGERTDY   79 (355)
T ss_dssp             CCBCCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEE-EEC--SSCEEEECTTSSCEEEEEEEEEETTEEEEEEE
T ss_pred             CcEeEeeCCCCCEEEEEecccCCCcCeEEEEECCCCcEEEEE-ECC--CCCceEEcCCCCEEEEEeCCCccccccCCCCE
Confidence            334446789999998764     3567999999998665544 333  3447999999999887643          688


Q ss_pred             EEEEeCCCCceeEEEEecCeE-------EEEEEEeeCCCEEEEEe--CCCeEEEEecCCCceEEEecCCCC------CCe
Q psy17610        148 IRIWSVRTLNELLRISVMNMI-------CACIVFTYDGKAILSGW--NDGFIRCFTPQSGKLKFIIPNAHN------RGV  212 (515)
Q Consensus       148 i~iw~~~~~~~~~~~~~~~~~-------v~~~~~~~~~~~l~~~~--~dg~i~~~~~~~~~~~~~~~~~~~------~~v  212 (515)
                      |++||+.+++.+..+..+...       ...++|+|++++++++.  .+..+.+|+..+++....+.....      ...
T Consensus        80 v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (355)
T d2bbkh_          80 VEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPD  159 (355)
T ss_dssp             EEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETT
T ss_pred             EEEEECCCCCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCCCCceeeeeecCCCcEeeEEecCCcceEeecCCc
Confidence            999999999998887754432       24578999999888775  456899999999998877642221      122


Q ss_pred             EEEEEcCCCCEEEEe-cCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEE-
Q psy17610        213 TALAITQDGTRLLSG-GGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLII-  290 (515)
Q Consensus       213 ~~~~~~~~~~~l~~~-~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~-  290 (515)
                      ..+.+++++..++.. ..++.+.+++....       ...+...+....+.+++..++.++.++.+.+|++..++.... 
T Consensus       160 ~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~  232 (355)
T d2bbkh_         160 TFFMHCRDGSLAKVAFGTEGTPEITHTEVF-------HPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLP  232 (355)
T ss_dssp             EEEEEETTSCEEEEECCSSSCCEEEECCCC-------SCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECC
T ss_pred             ceEEEcCCCCEEEEEecCCCeEEEEecccc-------cceecceeeeccccCCCCeEEEecCCCeEEEEecCCCcEEEEe
Confidence            345556665555433 23334444443211       122344455667888889999999999999999987654321 


Q ss_pred             -EEc-----------CccEEEEEEcCCCcEEEEEECC----------CeEEEEeCCCCceEEEEecCCCccEEEEEEcCC
Q psy17610        291 -MIL-----------PSMIMSAAYHPSEVQLITCSTN----------KMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDD  348 (515)
Q Consensus       291 -~~~-----------~~~~~~~~~~~~~~~l~~~~~~----------~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~  348 (515)
                       ...           +.....+++++++..++....+          ..+.+||..+++.+..+...  ..+.+++|+||
T Consensus       233 ~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~~~--~~~~~~a~spD  310 (355)
T d2bbkh_         233 AVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG--HEIDSINVSQD  310 (355)
T ss_dssp             CEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE--EEECEEEECCS
T ss_pred             ccCCcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCCCcEEEEecCC--CCEEEEEEcCC
Confidence             111           1123457889999888776543          46999999999999888754  56889999999


Q ss_pred             CC--EEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCC
Q psy17610        349 GK--YFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPD  390 (515)
Q Consensus       349 ~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~  390 (515)
                      |+  +++++..|+.|++||.++++.+.++.++......+.+.++
T Consensus       311 G~~~l~v~~~~d~~i~v~D~~tg~~~~~i~~~G~~p~~i~~~d~  354 (355)
T d2bbkh_         311 EKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTADM  354 (355)
T ss_dssp             SSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSSCCEEECCCC
T ss_pred             CCeEEEEEECCCCEEEEEECCCCCEEEEEeCcCCCccEEEeCCC
Confidence            97  4567788999999999999999998877666666665544

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.88  E-value=1.8e-20  Score=169.98  Aligned_cols=256  Identities=9%  Similarity=0.005  Sum_probs=175.9

Q ss_pred             EEEEecCCCEEEEEe----------cCceEEEEECCCCceeEEeecc--C----ccCeEEEEeCCCCcEEEEEec--CCc
Q psy17610         86 SLQYNPVNNKVFVGT----------VNCEIFLIDMNSGFTLTLVNTC--H----TSAIYDLQFPVNFSSVFATCS--KND  147 (515)
Q Consensus        86 ~~~~s~~~~~l~~~~----------~d~~i~iw~~~~~~~~~~~~~~--h----~~~v~~~~~~~~~~~l~~~~~--d~~  147 (515)
                      .++|||||++|++++          .++.|.+||..+++....+...  +    ......++|+|++++++++..  +..
T Consensus        51 ~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~  130 (355)
T d2bbkh_          51 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPA  130 (355)
T ss_dssp             EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCE
T ss_pred             ceEEcCCCCEEEEEeCCCccccccCCCCEEEEEECCCCCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCCCCce
Confidence            689999999888753          4789999999997655543221  1    123456899999999888764  678


Q ss_pred             EEEEeCCCCceeEEEEecCeEE-------EEEEEeeCCCEEEEEe-CCCeEEEEecCCCceEEEecCCCCCCeEEEEEcC
Q psy17610        148 IRIWSVRTLNELLRISVMNMIC-------ACIVFTYDGKAILSGW-NDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQ  219 (515)
Q Consensus       148 i~iw~~~~~~~~~~~~~~~~~v-------~~~~~~~~~~~l~~~~-~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  219 (515)
                      +.+|+..+++.+..+..+....       ..+.++++++.++... .++.+.+++.....      ..+...+....+.+
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~  204 (355)
T d2bbkh_         131 VGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFH------PEDEFLINHPAYSQ  204 (355)
T ss_dssp             EEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCS------CTTSCBCSCCEEET
T ss_pred             eeeeecCCCcEeeEEecCCcceEeecCCcceEEEcCCCCEEEEEecCCCeEEEEeccccc------ceecceeeeccccC
Confidence            9999999999888777554322       2234444444443322 22233333332221      23344455667888


Q ss_pred             CCCEEEEecCCCcEEEEEccCCceeeEEeeccc----------cCceEEEEEecCCCEEEEEeCC----------CcEEE
Q psy17610        220 DGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEH----------TSSVSVIQIKSDSKEAMSASTD----------GTCVL  279 (515)
Q Consensus       220 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~----------~~~v~~~~~~~~~~~l~~~~~d----------~~i~i  279 (515)
                      ++..++.++.++.+.+|++.............+          ......+++++++..++....+          ..|.+
T Consensus       205 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v  284 (355)
T d2bbkh_         205 KAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVV  284 (355)
T ss_dssp             TTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEE
T ss_pred             CCCeEEEecCCCeEEEEecCCCcEEEEeccCCcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEE
Confidence            888899999999999999975543333222221          1233457889999988766543          36999


Q ss_pred             EEcccceEEEEEEcCccEEEEEEcCCCcE--EEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCC
Q psy17610        280 WDLIKSTRLIIMILPSMIMSAAYHPSEVQ--LITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDD  348 (515)
Q Consensus       280 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~  348 (515)
                      ||..+++.+..+.....+.+++|+|+++.  ++++..++.|++||.++++.++++.... .....+.+.++
T Consensus       285 ~d~~t~~~~~~~~~~~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~~~~~i~~~G-~~p~~i~~~d~  354 (355)
T d2bbkh_         285 LDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLG-HGPQVITTADM  354 (355)
T ss_dssp             EETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCC-SSCCEEECCCC
T ss_pred             EeCCCCcEEEEecCCCCEEEEEEcCCCCeEEEEEECCCCEEEEEECCCCCEEEEEeCcC-CCccEEEeCCC
Confidence            99999999988888888999999999973  4556678999999999999999997553 33445554443

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.87  E-value=1e-19  Score=163.40  Aligned_cols=281  Identities=11%  Similarity=0.167  Sum_probs=189.5

Q ss_pred             EEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEe-CCCcEEEEEcccce----EEEEEEcCccE
Q psy17610        223 RLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAS-TDGTCVLWDLIKST----RLIIMILPSMI  297 (515)
Q Consensus       223 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~----~~~~~~~~~~~  297 (515)
                      .+++++.|+.|++|+++............|.+.+..++|+|||++|++++ .|+.|++|++....    ..........+
T Consensus         6 v~v~~~~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~p   85 (333)
T d1ri6a_           6 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSL   85 (333)
T ss_dssp             EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCC
T ss_pred             EEEECCCCCcEEEEEEcCCCCeEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCCc
Confidence            35677899999999997544333333345778899999999999986655 48999999987553    23333445567


Q ss_pred             EEEEEcCCCcEEEEEEC-CCeEEEEeCCCCceEEEEe-cCCCccEEEEEEcCCCCEEEEEcC-CCeEEEEEccCCeeee-
Q psy17610        298 MSAAYHPSEVQLITCST-NKMIDYWETCDGSIIRSLE-GSDVAAVNCVDFVDDGKYFLTGGA-DQIVKMWMYREGVPCF-  373 (515)
Q Consensus       298 ~~~~~~~~~~~l~~~~~-~~~i~~~d~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~-  373 (515)
                      ..++++|+++++++++. ++.+.+|+........... ..+...+.++.++|+++++++++. +..+.+|+........ 
T Consensus        86 ~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~  165 (333)
T d1ri6a_          86 THISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVA  165 (333)
T ss_dssp             SEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEE
T ss_pred             eEEEEcCCCCEEeecccCCCceeeeccccccceecccccCCCccceEEEeeecceeeeccccccceeeEEEeccCCccee
Confidence            78999999999998875 6789999887766544433 222256788999999998877764 5679999986643221 


Q ss_pred             -----eccCCCCCeeEEEECCCCcEEEEEe-CCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEe
Q psy17610        374 -----VGIGHAASITKIKISPDKKVIVSVS-ADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSA  447 (515)
Q Consensus       374 -----~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  447 (515)
                           ...........++|++++.+++... ..+...+|+...............    .      .............+
T Consensus       166 ~~~~~~~~~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~----~------~~~~~~~~~~~~~~  235 (333)
T d1ri6a_         166 QDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLD----M------MPENFSDTRWAADI  235 (333)
T ss_dssp             EEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEE----C------SCTTCCSCCCEEEE
T ss_pred             eeceeeeeecCCCccEEEEeccceeEEeeccccCceEEEeecccccceeeeeeee----e------eecCCCccccceeE
Confidence                 1123445668899999998877665 456788888654332111100000    0      00001122346678


Q ss_pred             eeccCCcEEEEe-ecCCeEEEEecCCCeeeeeeccc--ccceEEEEEEcCCCcEEEEee-cCCeEEEEEE
Q psy17610        448 AYHPSEVQLITC-STNKMIDYWETCDGSIIRSLEGS--DVAAVNCVDFVDDGKYFLTGG-ADQIVKICLY  513 (515)
Q Consensus       448 ~~s~~~~~l~~~-~~dg~v~iwd~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~~-~dg~v~iw~~  513 (515)
                      ++++++++++.. ..++.+.+|++...........+  ....+..++|+|||++|++++ .++.|++|++
T Consensus       236 ~~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~spDGk~l~va~~~~~~v~v~~i  305 (333)
T d1ri6a_         236 HITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEI  305 (333)
T ss_dssp             EECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEE
T ss_pred             EEecccCceeeecccCCeEEEEEEcCCCCEEEEEEEeCCCCCeeEEEEeCCCCEEEEEECCCCeEEEEEE
Confidence            899999876655 45678999988765433333221  114567899999999887765 5689999975

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.87  E-value=9.6e-20  Score=163.56  Aligned_cols=272  Identities=13%  Similarity=0.175  Sum_probs=190.3

Q ss_pred             EEEEecCCcEEEEeCCCCceeEEE--EecCeEEEEEEEeeCCCEEEEEe-CCCeEEEEecCCCceEEE--ecCCCCCCeE
Q psy17610        139 VFATCSKNDIRIWSVRTLNELLRI--SVMNMICACIVFTYDGKAILSGW-NDGFIRCFTPQSGKLKFI--IPNAHNRGVT  213 (515)
Q Consensus       139 l~~~~~d~~i~iw~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~~~~~~~~~~~--~~~~~~~~v~  213 (515)
                      +++++.+++|++|++.+...+..+  ..+...+..++|+|||++|++++ .++.|.+|++........  ....+...+.
T Consensus         7 ~v~~~~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~p~   86 (333)
T d1ri6a_           7 YIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLT   86 (333)
T ss_dssp             EEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCS
T ss_pred             EEECCCCCcEEEEEEcCCCCeEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCCce
Confidence            355557999999999765544333  36778899999999999996655 489999999876543221  1123455677


Q ss_pred             EEEEcCCCCEEEEecC-CCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeC-CCcEEEEEcccceEEEEE
Q psy17610        214 ALAITQDGTRLLSGGG-EGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST-DGTCVLWDLIKSTRLIIM  291 (515)
Q Consensus       214 ~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~  291 (515)
                      .++|+|||++|++++. ++.+.+|+..............+...+.++.++|++++++.++. +..+.+|+..........
T Consensus        87 ~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~  166 (333)
T d1ri6a_          87 HISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQ  166 (333)
T ss_dssp             EEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEE
T ss_pred             EEEEcCCCCEEeecccCCCceeeeccccccceecccccCCCccceEEEeeecceeeeccccccceeeEEEeccCCcceee
Confidence            8999999999998875 67899999865555555555667778889999999999888775 456899987654322211


Q ss_pred             -------EcCccEEEEEEcCCCcEEEEEE-CCCeEEEEeCCCCc----eEEEEec-----CCCccEEEEEEcCCCCEEEE
Q psy17610        292 -------ILPSMIMSAAYHPSEVQLITCS-TNKMIDYWETCDGS----IIRSLEG-----SDVAAVNCVDFVDDGKYFLT  354 (515)
Q Consensus       292 -------~~~~~~~~~~~~~~~~~l~~~~-~~~~i~~~d~~~~~----~~~~~~~-----~~~~~i~~~~~~~~~~~l~~  354 (515)
                             ........+++++++..++... ..+...+++.....    .......     ........+++++++++++.
T Consensus       167 ~~~~~~~~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~~~  246 (333)
T d1ri6a_         167 DPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYA  246 (333)
T ss_dssp             EEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEE
T ss_pred             eceeeeeecCCCccEEEEeccceeEEeeccccCceEEEeecccccceeeeeeeeeeecCCCccccceeEEEecccCceee
Confidence                   1223568899999998887665 45667777754432    1222211     11245667889999987665


Q ss_pred             E-cCCCeEEEEEccCCeeeeec---cCCCCCeeEEEECCCCcEEEEEeC-CCcEEEEeCCC
Q psy17610        355 G-GADQIVKMWMYREGVPCFVG---IGHAASITKIKISPDKKVIVSVSA-DGGIFLWTFPE  410 (515)
Q Consensus       355 ~-~~dg~i~i~d~~~~~~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~iw~~~~  410 (515)
                      . ..++.+.+|++.........   ......+..++|+|||++|++++. ++.|.+|++..
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~spDGk~l~va~~~~~~v~v~~id~  307 (333)
T d1ri6a_         247 CDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVG  307 (333)
T ss_dssp             EETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEET
T ss_pred             ecccCCeEEEEEEcCCCCEEEEEEEeCCCCCeeEEEEeCCCCEEEEEECCCCeEEEEEEEC
Confidence            4 56789999998765333222   234456788999999999887764 58899997643

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.81  E-value=1.8e-18  Score=162.86  Aligned_cols=368  Identities=8%  Similarity=0.000  Sum_probs=214.4

Q ss_pred             EEEEecCCCEEEEEecCceEEEEECCCCceeEEe----eccCccCeEEEEeCCCCcEEEEEec---------CCcEEEEe
Q psy17610         86 SLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLV----NTCHTSAIYDLQFPVNFSSVFATCS---------KNDIRIWS  152 (515)
Q Consensus        86 ~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~----~~~h~~~v~~~~~~~~~~~l~~~~~---------d~~i~iw~  152 (515)
                      .+.|.++++++..  .++.|.+||..+++....+    +..|...|.++.|||||++|+.++.         ++.+.+||
T Consensus        21 ~~~W~~d~~~~~~--~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d   98 (470)
T d2bgra1          21 SLRWISDHEYLYK--QENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYD   98 (470)
T ss_dssp             CCEECSSSEEEEE--SSSCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred             CCEeCCCCEEEEE--cCCcEEEEECCCCCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEE
Confidence            4678899987763  5788999999997654432    2345678999999999999998854         46789999


Q ss_pred             CCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCC-----------------CCCeEEE
Q psy17610        153 VRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAH-----------------NRGVTAL  215 (515)
Q Consensus       153 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~-----------------~~~v~~~  215 (515)
                      +++++ +..+..+...+..+.|||||+.+|.. .++.+.+|+..+++.......+.                 .+....+
T Consensus        99 ~~~~~-~~~l~~~~~~~~~~~~SPDG~~ia~~-~~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~  176 (470)
T d2bgra1          99 LNKRQ-LITEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSAL  176 (470)
T ss_dssp             TTTTE-ECCSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCE
T ss_pred             CCCCc-ccccccCCccccccccccCcceeeEe-ecccceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCcccc
Confidence            99876 44566777888999999999999986 56789999999988765442221                 2234567


Q ss_pred             EEcCCCCEEEEecCCCc-EEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEE----
Q psy17610        216 AITQDGTRLLSGGGEGQ-VRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLII----  290 (515)
Q Consensus       216 ~~~~~~~~l~~~~~d~~-i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~----  290 (515)
                      .|+|||++|+....|.. +..|.+.....     ..........+.+...+.    ...+..+.+|++..+.....    
T Consensus       177 ~wSPDGk~ia~~~~d~~~v~~~~~~~~~~-----~~~~~~~~~~~~~~~~g~----~~~~~~~~v~~~~~~~~~~~~~~~  247 (470)
T d2bgra1         177 WWSPNGTFLAYAQFNDTEVPLIEYSFYSD-----ESLQYPKTVRVPYPKAGA----VNPTVKFFVVNTDSLSSVTNATSI  247 (470)
T ss_dssp             EECTTSSEEEEEEEECTTCCEEEEEECCS-----TTCSSCEEEEEECCBTTS----CCCEEEEEEEEGGGCCSSSCCCEE
T ss_pred             EECCCCCccceeEecCCcCceEEEEeecc-----CCCCCCeeeeeccccccc----cCCcceEEEEECCCcceeeecccc
Confidence            89999999998876533 55554421100     000111112222211221    11233577888765542211    


Q ss_pred             -EE-------cCccEEEEEEcCCCcEEEEEEC-CC-----eEEEEeCCCCceEEEEe-----cC-------CCccEEEEE
Q psy17610        291 -MI-------LPSMIMSAAYHPSEVQLITCST-NK-----MIDYWETCDGSIIRSLE-----GS-------DVAAVNCVD  344 (515)
Q Consensus       291 -~~-------~~~~~~~~~~~~~~~~l~~~~~-~~-----~i~~~d~~~~~~~~~~~-----~~-------~~~~i~~~~  344 (515)
                       ..       ....+..+.|.+++..++.... .+     .+..+|..++.......     ..       +........
T Consensus       248 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~~d~~tg~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  327 (470)
T d2bgra1         248 QITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFT  327 (470)
T ss_dssp             EECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEEC
T ss_pred             ccCCccccCCCCceEEEEEEcCCCceeEEEeeccCCceEEEEEEecCCCCcEEEEEEEeeeeeeccceeecccCCCceee
Confidence             11       1123567888888876655432 21     23444555554432210     00       001111222


Q ss_pred             EcCCCCEEEEEcCCCeEEEE--EccCCeeeeeccCCCCCeeEEEECCCCcEE-EEEeCCC----cEEEEeCCCCcCccCC
Q psy17610        345 FVDDGKYFLTGGADQIVKMW--MYREGVPCFVGIGHAASITKIKISPDKKVI-VSVSADG----GIFLWTFPELEDDVGD  417 (515)
Q Consensus       345 ~~~~~~~l~~~~~dg~i~i~--d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg----~i~iw~~~~~~~~~~~  417 (515)
                      +.+++.+++....+|..+||  +...+. ...+..+...|..+ ++++++.+ +++..++    .-.||.+.-...... 
T Consensus       328 ~~~~~~~~~~s~~dg~~~ly~~~~~g~~-~~~lt~g~~~v~~~-~~~d~~~iyf~a~~~~~~p~~~~ly~v~~~g~~~~-  404 (470)
T d2bgra1         328 LDGNSFYKIISNEEGYRHICYFQIDKKD-CTFITKGTWEVIGI-EALTSDYLYYISNEYKGMPGGRNLYKIQLSDYTKV-  404 (470)
T ss_dssp             TTSSEEEEEEECTTSCEEEEEEETTCSC-CEESCCSSSCEEEE-EEECSSEEEEEESCGGGCTTCBEEEEEETTCTTCE-
T ss_pred             ecCCCcEEEEeccCcCceeEEEeccCCc-eeeeccCCeeEEEE-EEECCCEEEEEEecCCCCcceEEEEEEECCCCCce-
Confidence            23334445667777765555  554433 34444455667666 33334433 4444332    224555432110000 


Q ss_pred             CcccceeeecccccccceeeecCcccEEEeeeccCCcEEE---EeecCCeEEEEecCCCeeeeeeccc
Q psy17610        418 SRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLI---TCSTNKMIDYWETCDGSIIRSLEGS  482 (515)
Q Consensus       418 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~---~~~~dg~v~iwd~~~~~~~~~~~~~  482 (515)
                                   .........+...+..++|||||++++   ++...-.+.+|+..+++.++.++..
T Consensus       405 -------------~~lt~~~~~~~~~~~s~~fSpdgky~~~~~s~~~~P~~~l~~~~~g~~v~~le~n  459 (470)
T d2bgra1         405 -------------TCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVLEDN  459 (470)
T ss_dssp             -------------EESSTTTSTTTBCBEEEEECTTSSEEEEEECSBSSCEEEEEETTTTEEEEEEECC
T ss_pred             -------------eEecccccCCCCCEEEEEECCCCCEEEEEecCCCCCeEEEEECCCCCEEEEEecc
Confidence                         000001123455688999999999987   3334456899999999999988753

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=99.78  E-value=5.4e-19  Score=158.50  Aligned_cols=323  Identities=13%  Similarity=0.043  Sum_probs=211.4

Q ss_pred             ecCCcEEEEeCCCCceeEEEEe------------------------------cCeEEEEEEEeeCCCEEEEEe-CCCeEE
Q psy17610        143 CSKNDIRIWSVRTLNELLRISV------------------------------MNMICACIVFTYDGKAILSGW-NDGFIR  191 (515)
Q Consensus       143 ~~d~~i~iw~~~~~~~~~~~~~------------------------------~~~~v~~~~~~~~~~~l~~~~-~dg~i~  191 (515)
                      +.+|+|++|++.+++.++++..                              |.........+|||++|++.. .++.|.
T Consensus        18 g~sG~V~V~dlpS~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtpDGr~lfV~d~~~~rVa   97 (441)
T d1qnia2          18 GHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKYLFINDKANTRVA   97 (441)
T ss_dssp             BTTCCEEEEEETTTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEEEEEEEEEETTTTEEE
T ss_pred             CCCCcEEEEeCCCCcEEEEEEeEcCCCCEEEEECCccceEEecccccccCcccCCCcceecccCCCCEEEEEcCCCCEEE
Confidence            3489999999999988887642                              223345555689999987665 678999


Q ss_pred             EEecCCCceEEEecCCCCCCeEEEEEcCCCC--EEEEecCCCcEEE-EEccCCceeeEEeeccccCceEEEEEecCCCEE
Q psy17610        192 CFTPQSGKLKFIIPNAHNRGVTALAITQDGT--RLLSGGGEGQVRI-WKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEA  268 (515)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~i~i-w~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  268 (515)
                      ++|+++++....+..++...+..++|+|+|+  +++..+.+ .+.+ .+-     ...               ..+.++ 
T Consensus        98 vIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~-~v~~~~dg-----~~~---------------~~~~~~-  155 (441)
T d1qnia2          98 RIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEF-VIPQPNDG-----TDF---------------SLDNSY-  155 (441)
T ss_dssp             EEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECS-CEESSCSS-----SCC---------------CGGGEE-
T ss_pred             EEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCC-cccccCcc-----ccc---------------cccccc-
Confidence            9999999988877567788899999999988  44443333 2221 000     000               000000 


Q ss_pred             EEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCC-eEEEEeCCCCceEEEEecCCCccEEEEEEcC
Q psy17610        269 MSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNK-MIDYWETCDGSIIRSLEGSDVAAVNCVDFVD  347 (515)
Q Consensus       269 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~  347 (515)
                            ..+..+|..+.+....+..+.....+.++|+++++++.+.+. .+..++..+......+...  .....++++|
T Consensus       156 ------~~~~~iD~~t~~v~~qI~v~~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~--n~p~~~~~~~  227 (441)
T d1qnia2         156 ------TMFTAIDAETMDVAWQVIVDGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVF--NVERIAAAVK  227 (441)
T ss_dssp             ------EEEEEEETTTCSEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEE--EHHHHHHHHH
T ss_pred             ------ceEEeecCccceeeEEEecCCCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeC--CccceEEEec
Confidence                  135567888888888888888889999999999999887653 3333343333333222221  1222345778


Q ss_pred             CCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEE-EeCCCcEEEEeCCCCcCccCCCcccceeee
Q psy17610        348 DGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVS-VSADGGIFLWTFPELEDDVGDSRSLSSKIS  426 (515)
Q Consensus       348 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~  426 (515)
                      +|+++..++ ++.+.+++....+.+..++.... ...+.++|||+++++ +..++++.+||+.+................
T Consensus       228 dGk~~~v~~-~~v~vvd~~~~~~v~~~IPvgks-PhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~  305 (441)
T d1qnia2         228 AGNFKTIGD-SKVPVVDGRGESEFTRYIPVPKN-PHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIV  305 (441)
T ss_dssp             TTCCBCCTT-CCCCEEECSSSCSSEEEECCBSS-CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGEE
T ss_pred             CCCEEEeCC-CCcEEEEcccCCceEEEEeCCCC-ccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccCCcceEEE
Confidence            999876654 66777877766666777666544 578999999998765 456899999999765432221111100000


Q ss_pred             cccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCC----------Ceeeeee-----cccccceEEEEE
Q psy17610        427 RSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCD----------GSIIRSL-----EGSDVAAVNCVD  491 (515)
Q Consensus       427 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~----------~~~~~~~-----~~~~~~~v~~~~  491 (515)
                               ......-.....+|.++|..+.+..-|..|..|++..          ...+..+     .+|. ..+.+.+
T Consensus       306 ---------~~~~~glgplh~~fd~~g~~yts~~~ds~v~kw~~~~~~~~~~~~~~~~v~~~~~v~y~~GH~-~~~~~~t  375 (441)
T d1qnia2         306 ---------AEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPGHN-HASLTES  375 (441)
T ss_dssp             ---------ECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEE-EETTTTS
T ss_pred             ---------eecccccCcccceecCCceEEEcccccceEEEeccchhhhhhccCCCceeEeccccccCCCCC-ccccccc
Confidence                     0000111245668999999889999999999999742          1233333     3444 5666778


Q ss_pred             EcCCCcEEEEe---ecCCe
Q psy17610        492 FVDDGKYFLTG---GADQI  507 (515)
Q Consensus       492 ~s~~~~~l~s~---~~dg~  507 (515)
                      ++|||+||+++   +.|..
T Consensus       376 ~~pdGk~l~s~~k~s~dr~  394 (441)
T d1qnia2         376 RDADGKWLVVLSKFSKDRF  394 (441)
T ss_dssp             TTCCCCEEEEEESCCGGGS
T ss_pred             cCCCCcEEEecCccccccC
Confidence            99999999999   55543

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.77  E-value=5.5e-17  Score=147.33  Aligned_cols=296  Identities=7%  Similarity=-0.012  Sum_probs=198.4

Q ss_pred             CCCcEEEEEEecCCCEEEEE---ec--CceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec----------
Q psy17610         80 DDSGISSLQYNPVNNKVFVG---TV--NCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS----------  144 (515)
Q Consensus        80 ~~~~v~~~~~s~~~~~l~~~---~~--d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~----------  144 (515)
                      +.+....++..++++.....   ..  +..|++||..+++.+..+. ++..+  .++|+|||+.+++++.          
T Consensus        18 ~~g~~~~~a~~~~~~~~~v~~~~~~~g~~~~~~~d~~~~~~~~~~~-~~~~~--~~a~spDg~~i~~~~~~~~~~~~g~~   94 (368)
T d1mdah_          18 SDGSSCDHGPGAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSL-GAFLS--LAVAGHSGSDFALASTSFARSAKGKR   94 (368)
T ss_dssp             CCCCCBCCCCCCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEE-ECTTC--EEEECTTSSCEEEEEEEETTTTSSSE
T ss_pred             cCCCccccccCCCCcceeEEeeccCCCcceEEEEeCCCCcEEEEEe-CCCCC--cceECCCCCEEEEEcccCcccccccc
Confidence            44555566678888764332   22  3468888999976655543 34443  5899999999988752          


Q ss_pred             CCcEEEEeCCCCceeEEEEecCeE-------EEEEEEeeCCCEEEEEe-CCCeEEEEecCCCceEEEecCCCCCCeEEEE
Q psy17610        145 KNDIRIWSVRTLNELLRISVMNMI-------CACIVFTYDGKAILSGW-NDGFIRCFTPQSGKLKFIIPNAHNRGVTALA  216 (515)
Q Consensus       145 d~~i~iw~~~~~~~~~~~~~~~~~-------v~~~~~~~~~~~l~~~~-~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~  216 (515)
                      |+.|.+||..+++++..+..+...       ...++|+|||++|+++. .++.+.+||+.+++....+.......+    
T Consensus        95 d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~~~~~~~~~~~----  170 (368)
T d1mdah_          95 TDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHI----  170 (368)
T ss_dssp             EEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCC----
T ss_pred             CCeEEEEECCCCcEeeeecCCccceecccCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcEeEEeeccCcceE----
Confidence            677999999999999888754332       23589999999998776 578999999999998887743322222    


Q ss_pred             EcCCCCEEEEecCCCcEEEEEccCCceeeEE----eeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEE
Q psy17610        217 ITQDGTRLLSGGGEGQVRIWKLTRESQSLQC----VLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMI  292 (515)
Q Consensus       217 ~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~  292 (515)
                      +......++..+.||.+.++++.........    ....+...+....+.+++..+.+.  .+.+.+++...........
T Consensus       171 ~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~v~~~~~~~~~~~~~~~  248 (368)
T d1mdah_         171 HPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAV--ASSILQGDIPAAGATMKAA  248 (368)
T ss_dssp             EEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECB--SSCCEEEECCSSCCEEECC
T ss_pred             ccCCCceEEEEcCCCCEEEEEecCCceeeeeeecccccccccceeecccccCcEEEEec--CCCEEEEeecCCceEEEee
Confidence            1123345666777888888887543322221    122334445566666776555443  4556666665544333221


Q ss_pred             cC-------------ccEEEEEEcCCCcEEEEEECC---------CeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCC
Q psy17610        293 LP-------------SMIMSAAYHPSEVQLITCSTN---------KMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGK  350 (515)
Q Consensus       293 ~~-------------~~~~~~~~~~~~~~l~~~~~~---------~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~  350 (515)
                      ..             .....+++++++..++....+         ..+.+||..+++.+..+...  ..+..++|+|||+
T Consensus       249 ~~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~--~~~~~~a~spDG~  326 (368)
T d1mdah_         249 IDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNG--HDSDAIIAAQDGA  326 (368)
T ss_dssp             CCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEE--EEECEEEECCSSS
T ss_pred             cccccceeeeeeecCCCceeEEEcCCCCEEEEEecCCCceeecCCceEEEEECCCCcEeEEecCC--CceeEEEECCCCC
Confidence            11             113457888988877665432         35899999999988887754  5788999999997


Q ss_pred             --EEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEE
Q psy17610        351 --YFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKI  387 (515)
Q Consensus       351 --~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~  387 (515)
                        +++++..++.|++||..+++.+..+..... .+.|++
T Consensus       327 ~~ly~s~~~~~~v~v~D~~tgk~~~~i~~g~~-P~~l~~  364 (368)
T d1mdah_         327 SDNYANSAGTEVLDIYDAASDQDQSSVELDKG-PESLSV  364 (368)
T ss_dssp             CEEEEEETTTTEEEEEESSSCEEEEECCCCSC-CCEEEC
T ss_pred             EEEEEEeCCCCeEEEEECCCCCEEEEEECCCC-CCEEEE
Confidence              346677889999999999999988865433 344544

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.74  E-value=7.7e-17  Score=151.57  Aligned_cols=356  Identities=8%  Similarity=-0.040  Sum_probs=200.0

Q ss_pred             ccCCCCceEEEecCCCCeEEEEcCCCCCCcccccccceEEeeccccccccccccccccccCcceeeeccceEEEEEecCC
Q psy17610          2 KTTPNDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMGCYGKLIKKKVSTKLKDVNAEDVSLYSAGVTALYLLKDD   81 (515)
Q Consensus         2 ~~~~~~~~~~~g~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (515)
                      ...++++++|.  .+|.|.+||+.+++....++                           .            ..+..|.
T Consensus        23 ~W~~d~~~~~~--~~~~~~~~~~~t~~~~~~~~---------------------------~------------~~~~~~~   61 (470)
T d2bgra1          23 RWISDHEYLYK--QENNILVFNAEYGNSSVFLE---------------------------N------------STFDEFG   61 (470)
T ss_dssp             EECSSSEEEEE--SSSCEEEEETTTCCEEEEEC---------------------------T------------TTTTTSS
T ss_pred             EeCCCCEEEEE--cCCcEEEEECCCCCEEEEEc---------------------------h------------hhhhhcc
Confidence            45678888886  57889999988763111100                           0            0112366


Q ss_pred             CcEEEEEEecCCCEEEEEec---------CceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEe
Q psy17610         82 SGISSLQYNPVNNKVFVGTV---------NCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWS  152 (515)
Q Consensus        82 ~~v~~~~~s~~~~~l~~~~~---------d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~  152 (515)
                      ..|.++.|||||++||.++.         ++.+++||+++++ +. .+..|...+..+.|||||+.++.. .++.+.+|+
T Consensus        62 ~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~-~~-~l~~~~~~~~~~~~SPDG~~ia~~-~~~~l~~~~  138 (470)
T d2bgra1          62 HSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQ-LI-TEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKI  138 (470)
T ss_dssp             SCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTE-EC-CSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEES
T ss_pred             CccceeEECCCCCEEEEEECCcceeeeccCceEEEEECCCCc-cc-ccccCCccccccccccCcceeeEe-ecccceEEE
Confidence            78999999999999998753         5788999999964 33 456688999999999999998885 577899999


Q ss_pred             CCCCceeEEEEec------------------CeEEEEEEEeeCCCEEEEEeCCCe-EEEEecCCCceEEEecCCCCCCeE
Q psy17610        153 VRTLNELLRISVM------------------NMICACIVFTYDGKAILSGWNDGF-IRCFTPQSGKLKFIIPNAHNRGVT  213 (515)
Q Consensus       153 ~~~~~~~~~~~~~------------------~~~v~~~~~~~~~~~l~~~~~dg~-i~~~~~~~~~~~~~~~~~~~~~v~  213 (515)
                      ..+++..+.....                  .+....+.|+|||++|+....|.. +..|.+.....    .........
T Consensus       139 ~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~d~~~v~~~~~~~~~~----~~~~~~~~~  214 (470)
T d2bgra1         139 EPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSD----ESLQYPKTV  214 (470)
T ss_dssp             STTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCS----TTCSSCEEE
T ss_pred             CCCCceeeeeeccCCCcccccccceeeeeeecCCccccEECCCCCccceeEecCCcCceEEEEeecc----CCCCCCeee
Confidence            9988765533211                  112345789999999998875532 43333210000    001111122


Q ss_pred             EEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEe---------eccccCceEEEEEecCCCEEEEEe-CCC---c--EE
Q psy17610        214 ALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCV---------LKEHTSSVSVIQIKSDSKEAMSAS-TDG---T--CV  278 (515)
Q Consensus       214 ~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~---------~~~~~~~v~~~~~~~~~~~l~~~~-~d~---~--i~  278 (515)
                      .+.+...+.    ...+..+.+|++..........         .......+..+.|.+++..++... ..+   .  +.
T Consensus       215 ~~~~~~~g~----~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~r~~~~~~~~~~  290 (470)
T d2bgra1         215 RVPYPKAGA----VNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDIC  290 (470)
T ss_dssp             EEECCBTTS----CCCEEEEEEEEGGGCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEE
T ss_pred             eeccccccc----cCCcceEEEEECCCcceeeeccccccCCccccCCCCceEEEEEEcCCCceeEEEeeccCCceEEEEE
Confidence            222222221    1233467788875432211100         112233466788888887655432 222   2  33


Q ss_pred             EEEcccceEEEEE-------EcCc-----cEEEEEEcCCC--cEEEEEECCCeE--EEEeCCCCceEEEEecCCCccEEE
Q psy17610        279 LWDLIKSTRLIIM-------ILPS-----MIMSAAYHPSE--VQLITCSTNKMI--DYWETCDGSIIRSLEGSDVAAVNC  342 (515)
Q Consensus       279 iwd~~~~~~~~~~-------~~~~-----~~~~~~~~~~~--~~l~~~~~~~~i--~~~d~~~~~~~~~~~~~~~~~i~~  342 (515)
                      .+|..++......       ....     ......+.+++  ..++....+|..  ++|+...+.. ..+.... ..+..
T Consensus       291 ~~d~~tg~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~~dg~~~ly~~~~~g~~~-~~lt~g~-~~v~~  368 (470)
T d2bgra1         291 DYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDC-TFITKGT-WEVIG  368 (470)
T ss_dssp             EEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSCC-EESCCSS-SCEEE
T ss_pred             EecCCCCcEEEEEEEeeeeeeccceeecccCCCceeeecCCCcEEEEeccCcCceeEEEeccCCce-eeeccCC-eeEEE
Confidence            3444444433221       1110     11122344433  344556666654  4556544443 3333333 55665


Q ss_pred             EEEcCCCCEE-EEEcCCC----e--EEEEEccCCeeee----eccCCCCCeeEEEECCCCcEEEEE---eCCCcEEEEeC
Q psy17610        343 VDFVDDGKYF-LTGGADQ----I--VKMWMYREGVPCF----VGIGHAASITKIKISPDKKVIVSV---SADGGIFLWTF  408 (515)
Q Consensus       343 ~~~~~~~~~l-~~~~~dg----~--i~i~d~~~~~~~~----~~~~~~~~i~~~~~~~~~~~l~~~---~~dg~i~iw~~  408 (515)
                      + ++++++.+ +++..++    .  |.-.++..+....    .+..|...+.+++|||||++++..   ...-.+.+|+.
T Consensus       369 ~-~~~d~~~iyf~a~~~~~~p~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~s~~fSpdgky~~~~~s~~~~P~~~l~~~  447 (470)
T d2bgra1         369 I-EALTSDYLYYISNEYKGMPGGRNLYKIQLSDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSS  447 (470)
T ss_dssp             E-EEECSSEEEEEESCGGGCTTCBEEEEEETTCTTCEEESSTTTSTTTBCBEEEEECTTSSEEEEEECSBSSCEEEEEET
T ss_pred             E-EEECCCEEEEEEecCCCCcceEEEEEEECCCCCceeEecccccCCCCCEEEEEECCCCCEEEEEecCCCCCeEEEEEC
Confidence            5 33334433 4444322    2  3333444433332    244788889999999999987733   23345888887


Q ss_pred             CCCc
Q psy17610        409 PELE  412 (515)
Q Consensus       409 ~~~~  412 (515)
                      .+++
T Consensus       448 ~~g~  451 (470)
T d2bgra1         448 VNDK  451 (470)
T ss_dssp             TTTE
T ss_pred             CCCC
Confidence            6653

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=99.72  E-value=1.3e-17  Score=149.45  Aligned_cols=296  Identities=10%  Similarity=-0.016  Sum_probs=201.7

Q ss_pred             EEEEecCceEEEEECCCCceeEEeec-----------------------------cCccCeEEEEeCCCCcEEEEEec-C
Q psy17610         96 VFVGTVNCEIFLIDMNSGFTLTLVNT-----------------------------CHTSAIYDLQFPVNFSSVFATCS-K  145 (515)
Q Consensus        96 l~~~~~d~~i~iw~~~~~~~~~~~~~-----------------------------~h~~~v~~~~~~~~~~~l~~~~~-d  145 (515)
                      +++++.+|.|.+|++.+++.+..+--                             .|........++|||++|++... +
T Consensus        14 f~Sgg~sG~V~V~dlpS~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtpDGr~lfV~d~~~   93 (441)
T d1qnia2          14 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKYLFINDKAN   93 (441)
T ss_dssp             EEECBTTCCEEEEEETTTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEEEEEEEEEETTT
T ss_pred             EEeCCCCCcEEEEeCCCCcEEEEEEeEcCCCCEEEEECCccceEEecccccccCcccCCCcceecccCCCCEEEEEcCCC
Confidence            45667789999999988766555311                             12233555667899999988775 8


Q ss_pred             CcEEEEeCCCCceeEEEEe-cCeEEEEEEEeeCCC--EEEEEeCCC-----------------eEEEEecCCCceEEEec
Q psy17610        146 NDIRIWSVRTLNELLRISV-MNMICACIVFTYDGK--AILSGWNDG-----------------FIRCFTPQSGKLKFIIP  205 (515)
Q Consensus       146 ~~i~iw~~~~~~~~~~~~~-~~~~v~~~~~~~~~~--~l~~~~~dg-----------------~i~~~~~~~~~~~~~~~  205 (515)
                      ++|.++|+++++....+.. .......++|+|+++  +++..+.+.                 .+..+|..+.+...++.
T Consensus        94 ~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~v~~qI~  173 (441)
T d1qnia2          94 TRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVAWQVI  173 (441)
T ss_dssp             TEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTCSEEEEEE
T ss_pred             CEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCccceeeEEEe
Confidence            8999999999998887764 356788999999998  444444332                 23557888888777764


Q ss_pred             CCCCCCeEEEEEcCCCCEEEEecCCC-cEEEEEccCCc-eeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcc
Q psy17610        206 NAHNRGVTALAITQDGTRLLSGGGEG-QVRIWKLTRES-QSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLI  283 (515)
Q Consensus       206 ~~~~~~v~~~~~~~~~~~l~~~~~d~-~i~iw~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~  283 (515)
                      .  ......+.++|+|+++++.+.+. .+..++..+.. ...+....    .-..+.+.|+|+++.. +.++.+.+++..
T Consensus       174 v--~~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n----~p~~~~~~~dGk~~~v-~~~~v~vvd~~~  246 (441)
T d1qnia2         174 V--DGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFN----VERIAAAVKAGNFKTI-GDSKVPVVDGRG  246 (441)
T ss_dssp             E--SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEE----HHHHHHHHHTTCCBCC-TTCCCCEEECSS
T ss_pred             c--CCCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCC----ccceEEEecCCCEEEe-CCCCcEEEEccc
Confidence            2  34578899999999998877653 23222321111 11111111    1122345678887654 446788888877


Q ss_pred             cceEEEEEEcCccEEEEEEcCCCcEEEE-EECCCeEEEEeCCCCce-----------EEEEecCCCccEEEEEEcCCCCE
Q psy17610        284 KSTRLIIMILPSMIMSAAYHPSEVQLIT-CSTNKMIDYWETCDGSI-----------IRSLEGSDVAAVNCVDFVDDGKY  351 (515)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~i~~~d~~~~~~-----------~~~~~~~~~~~i~~~~~~~~~~~  351 (515)
                      ..+.+..+..+.....+.++|||+++++ +..++++.+||+.+...           +... ....-.....+|.++|..
T Consensus       247 ~~~v~~~IPvgksPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~-~~~glgplh~~fd~~g~~  325 (441)
T d1qnia2         247 ESEFTRYIPVPKNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVAE-PELGLGPLHTTFDGRGNA  325 (441)
T ss_dssp             SCSSEEEECCBSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGEEEC-CBCCSCEEEEEECSSSEE
T ss_pred             CCceEEEEeCCCCccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccCCcceEEEee-cccccCcccceecCCceE
Confidence            7777777777777889999999998865 45689999999765221           1111 111123455689999999


Q ss_pred             EEEEcCCCeEEEEEccCC----------eeeeec-----cCCCCCeeEEEECCCCcEEEEEeC
Q psy17610        352 FLTGGADQIVKMWMYREG----------VPCFVG-----IGHAASITKIKISPDKKVIVSVSA  399 (515)
Q Consensus       352 l~~~~~dg~i~i~d~~~~----------~~~~~~-----~~~~~~i~~~~~~~~~~~l~~~~~  399 (515)
                      +.+...|..|..|++...          ..+..+     .+|...+.+.+++|||++|++++.
T Consensus       326 yts~~~ds~v~kw~~~~~~~~~~~~~~~~v~~~~~v~y~~GH~~~~~~~t~~pdGk~l~s~~k  388 (441)
T d1qnia2         326 YTTLFIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDADGKWLVVLSK  388 (441)
T ss_dssp             EEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCCCEEEEEES
T ss_pred             EEcccccceEEEeccchhhhhhccCCCceeEeccccccCCCCCccccccccCCCCcEEEecCc
Confidence            999999999999997521          122222     578777788889999999999954

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.72  E-value=1.7e-15  Score=137.38  Aligned_cols=253  Identities=5%  Similarity=-0.054  Sum_probs=172.2

Q ss_pred             EEEEecCCCEEEEEe----------cCceEEEEECCCCceeEEeecc------CccCeEEEEeCCCCcEEEEEec-CCcE
Q psy17610         86 SLQYNPVNNKVFVGT----------VNCEIFLIDMNSGFTLTLVNTC------HTSAIYDLQFPVNFSSVFATCS-KNDI  148 (515)
Q Consensus        86 ~~~~s~~~~~l~~~~----------~d~~i~iw~~~~~~~~~~~~~~------h~~~v~~~~~~~~~~~l~~~~~-d~~i  148 (515)
                      .++|+|||+.|++++          .|+.|.+||..+++....+...      .......++|+|||++++++.. ++.+
T Consensus        69 ~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v  148 (368)
T d1mdah_          69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAA  148 (368)
T ss_dssp             EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCE
T ss_pred             cceECCCCCEEEEEcccCccccccccCCeEEEEECCCCcEeeeecCCccceecccCCccceEECCCCCEEEEEeCCCCeE
Confidence            489999999998865          3678999999997665544211      1112346899999999988864 7999


Q ss_pred             EEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEe-----cCCCCCCeEEEEEcCCCCE
Q psy17610        149 RIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFII-----PNAHNRGVTALAITQDGTR  223 (515)
Q Consensus       149 ~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~  223 (515)
                      .+||+.+++.+..+..+....   .+......++..+.||.+.++++.........     ...+...+....+.+++..
T Consensus       149 ~~~d~~~~~~~~~~~~~~~~~---~~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  225 (368)
T d1mdah_         149 AGLSVPGASDDQLTKSASCFH---IHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGML  225 (368)
T ss_dssp             EEEEETTTEEEEEEECSSCCC---CEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEE
T ss_pred             EEEECCCCcEeEEeeccCcce---EccCCCceEEEEcCCCCEEEEEecCCceeeeeeecccccccccceeecccccCcEE
Confidence            999999999888877654431   11223445666777888888877654432211     1234445566778888765


Q ss_pred             EEEecCCCcEEEEEccCCceeeEEeecc----------ccCceEEEEEecCCCEEEEEeCC---------CcEEEEEccc
Q psy17610        224 LLSGGGEGQVRIWKLTRESQSLQCVLKE----------HTSSVSVIQIKSDSKEAMSASTD---------GTCVLWDLIK  284 (515)
Q Consensus       224 l~~~~~d~~i~iw~~~~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~l~~~~~d---------~~i~iwd~~~  284 (515)
                      +.+.  .+.+.+++..............          .......+++++++..++....+         ..|.+||..+
T Consensus       226 ~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t  303 (368)
T d1mdah_         226 VWAV--ASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASV  303 (368)
T ss_dssp             EECB--SSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSS
T ss_pred             EEec--CCCEEEEeecCCceEEEeecccccceeeeeeecCCCceeEEEcCCCCEEEEEecCCCceeecCCceEEEEECCC
Confidence            5543  4567777765433332222211          11223457888998887665432         3589999999


Q ss_pred             ceEEEEEEcCccEEEEEEcCCCcE--EEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEE
Q psy17610        285 STRLIIMILPSMIMSAAYHPSEVQ--LITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDF  345 (515)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~  345 (515)
                      ++.+..+.....+..++|+||++.  ++++..++.|++||..+++.+.+++...  ..+.+++
T Consensus       304 ~~~~~~~~~~~~~~~~a~spDG~~~ly~s~~~~~~v~v~D~~tgk~~~~i~~g~--~P~~l~~  364 (368)
T d1mdah_         304 GQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDK--GPESLSV  364 (368)
T ss_dssp             CCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCS--CCCEEEC
T ss_pred             CcEeEEecCCCceeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEEECCC--CCCEEEE
Confidence            999888887788899999999973  3455668999999999999999887653  3344444

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=99.49  E-value=8.9e-11  Score=104.98  Aligned_cols=305  Identities=7%  Similarity=-0.028  Sum_probs=164.6

Q ss_pred             EEEEeC--CCeEEEE--ecCCCceE--EEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccC
Q psy17610        181 ILSGWN--DGFIRCF--TPQSGKLK--FIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTS  254 (515)
Q Consensus       181 l~~~~~--dg~i~~~--~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~  254 (515)
                      |++|+.  .+.|..+  |.++++..  ..........+..|+++|+++.|.++.. +.+..|.+................
T Consensus         5 l~vGtyt~~~~i~~~~fd~~~~~l~~~~~~~~~~~~~~s~la~s~d~~~ly~~~~-~~~~~~~i~~~~~~~~~~~~~~~~   83 (365)
T d1jofa_           5 LMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAM-KKWSSFAVKSPTEIVHEASHPIGG   83 (365)
T ss_dssp             EEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEB-TEEEEEEEEETTEEEEEEEEECCS
T ss_pred             EEEEeecCCCCEEEEEEcCCCCeEEEeeeeeccCCCCCCEEEEcCCCCEEEEEeC-CcEEEEEEeCCCCeEEEeeecCCC
Confidence            556643  4456554  55555442  2222345556778999999999987765 568888876443322222111223


Q ss_pred             ceEEEEEecCCCEEEEEeC---CCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEE
Q psy17610        255 SVSVIQIKSDSKEAMSAST---DGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRS  331 (515)
Q Consensus       255 ~v~~~~~~~~~~~l~~~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~  331 (515)
                      ....+.++++++.++....   .+.+..+.+                    .+++........+....+     ......
T Consensus        84 ~p~~v~~~~~~~~~~v~~a~~~~~~v~~~~~--------------------~~~~~~~~~~~~~~~~~~-----~~~~~~  138 (365)
T d1jofa_          84 HPRANDADTNTRAIFLLAAKQPPYAVYANPF--------------------YKFAGYGNVFSVSETGKL-----EKNVQN  138 (365)
T ss_dssp             SGGGGCTTSCCEEEEEEECSSTTCCEEEEEE--------------------SSSCCEEEEEEECTTCCE-----EEEEEE
T ss_pred             CcEEEEECCCCCEEEEEEecCCCCEEEEeEc--------------------cCCCCcceeEeeeeccee-----cCcccC
Confidence            3456677888875433222   344444332                    222221111111100000     011122


Q ss_pred             EecCCCccEEEEEEcCCCCEEEEEcC-CCeEEEEEccCC-eee--ee--ccCCCCCeeEEEECCCCcEEEEEe-CCCcEE
Q psy17610        332 LEGSDVAAVNCVDFVDDGKYFLTGGA-DQIVKMWMYREG-VPC--FV--GIGHAASITKIKISPDKKVIVSVS-ADGGIF  404 (515)
Q Consensus       332 ~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~-~~~--~~--~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~  404 (515)
                      ........+.++.|+|+|+++++... ...|.+|+.... ...  ..  ........+.++|+|+++++.+.. .+++|.
T Consensus       139 ~~~q~~~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~  218 (365)
T d1jofa_         139 YEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRIC  218 (365)
T ss_dssp             EECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred             cccCCCCcceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeeccceeecCCCCceEEEEECCCCceEEEeccCCCEEE
Confidence            22222245789999999998887754 457888876542 221  11  123346789999999999886665 478899


Q ss_pred             EEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeec------CCeEEEEecCCCeeeee
Q psy17610        405 LWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCST------NKMIDYWETCDGSIIRS  478 (515)
Q Consensus       405 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~------dg~v~iwd~~~~~~~~~  478 (515)
                      +|++............... ......................+.++|||++|+++..      .+.|..|++.....+..
T Consensus       219 v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~  297 (365)
T d1jofa_         219 EYVIDPATHMPVYTHHSFP-LIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEK  297 (365)
T ss_dssp             EEEECTTTCCEEEEEEEEE-SSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEE
T ss_pred             EEEecCCCceEEEEeeeec-cccccccccccccccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecCCCceee
Confidence            9998654321100000000 0000000000011122334667899999999987743      23377777654322211


Q ss_pred             -e-----cccccceEEEEEEcC-CCcEEEEe-ecCCeEEEEEE
Q psy17610        479 -L-----EGSDVAAVNCVDFVD-DGKYFLTG-GADQIVKICLY  513 (515)
Q Consensus       479 -~-----~~~~~~~v~~~~~s~-~~~~l~s~-~~dg~v~iw~~  513 (515)
                       .     .... ....+++++| +|++|+.+ ..++.|.+|++
T Consensus       298 ~~~~~~~~~~G-~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~  339 (365)
T d1jofa_         298 QLFLSPTPTSG-GHSNAVSPCPWSDEWMAITDDQEGWLEIYRW  339 (365)
T ss_dssp             EEEEEECSSCC-TTCCCEEECTTCTTEEEEECSSSCEEEEEEE
T ss_pred             EeEeeEEEcCC-CCccEEEecCCCCCEEEEEeCCCCeEEEEEE
Confidence             1     1111 3456799998 89987766 46799999985

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=3.2e-11  Score=111.21  Aligned_cols=366  Identities=13%  Similarity=0.071  Sum_probs=210.8

Q ss_pred             EEecCCCEEEEEecCceEEEEECCCCceeEEeec--cCccCeEEEEeCCCCcEEEEEec---------CCcEEEEeCCCC
Q psy17610         88 QYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNT--CHTSAIYDLQFPVNFSSVFATCS---------KNDIRIWSVRTL  156 (515)
Q Consensus        88 ~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~~~~~---------d~~i~iw~~~~~  156 (515)
                      .|.+++.++. -..+|.|.+||..++.....+..  -..-.+....||||+++++....         .+.+.++|+.++
T Consensus        23 ~W~~~~~~~~-~~~~g~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~  101 (465)
T d1xfda1          23 KWISDTEFIY-REQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHG  101 (465)
T ss_dssp             CBSSSSCBCC-CCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSC
T ss_pred             EEeCCCcEEE-EeCCCcEEEEECCCCCEEEEEcCccccccccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCC
Confidence            4677776554 35678899999998654332221  12236778889999999887643         467889999987


Q ss_pred             ceeEEEE--ecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCe-----------------EEEEE
Q psy17610        157 NELLRIS--VMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGV-----------------TALAI  217 (515)
Q Consensus       157 ~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v-----------------~~~~~  217 (515)
                      +......  .....+....|||||+.+|... ++.|.+.+..++...+....+....+                 ..+.|
T Consensus       102 ~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~-~~nl~~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~W  180 (465)
T d1xfda1         102 DPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWW  180 (465)
T ss_dssp             CCEECCCTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEE
T ss_pred             ceeeccCccCCccccceeeeccCCceEEEEe-cceEEEEecCCCceEEEecccCcceeeccccchhhhhhhccccceEEE
Confidence            6433211  2233455688999999998875 56789998888776655533332222                 57789


Q ss_pred             cCCCCEEEEecC-CCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC--
Q psy17610        218 TQDGTRLLSGGG-EGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP--  294 (515)
Q Consensus       218 ~~~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~--  294 (515)
                      +|||++||.... +..+..+.+.....       .....+..+.+...|..-    ....+.++|+.++........+  
T Consensus       181 SPDgk~iaf~~~D~s~V~~~~~~~~~~-------~~~p~~~~~~Yp~~G~~n----p~~~l~v~d~~~~~~~~~~~~~~~  249 (465)
T d1xfda1         181 SPDGTRLAYAAINDSRVPIMELPTYTG-------SIYPTVKPYHYPKAGSEN----PSISLHVIGLNGPTHDLEMMPPDD  249 (465)
T ss_dssp             CTTSSEEEEEEEECTTSCEEEECCCSS-------SSSCCCEEEECCBTTSCC----CEEEEEEEESSSSCCCEECCCCCC
T ss_pred             CCCCCeEEEEEecccccceeecccccc-------cccceeeeeeccccCCCC----CceeEEEEecCCCcEEEEEeccCc
Confidence            999999998653 34455554421110       011122223332222110    0124677777655433222111  


Q ss_pred             -----ccEEEEEEcCCCcEEEEEECC----CeEEEEeCCCCceEEEEecCCCccE----EEEEEcCCCCEEE---EEcCC
Q psy17610        295 -----SMIMSAAYHPSEVQLITCSTN----KMIDYWETCDGSIIRSLEGSDVAAV----NCVDFVDDGKYFL---TGGAD  358 (515)
Q Consensus       295 -----~~~~~~~~~~~~~~l~~~~~~----~~i~~~d~~~~~~~~~~~~~~~~~i----~~~~~~~~~~~l~---~~~~d  358 (515)
                           .-+..+.|.|+++.++.....    ..+.++|..+++....+.......+    ....|+|+|+.++   ..-.+
T Consensus       250 ~~~~~~y~~~~~W~~d~~~~~~~~nR~q~~~~i~~~d~~tg~~~~~~~e~~~~wv~~~~~~p~~~~dg~~~~fi~~se~~  329 (465)
T d1xfda1         250 PRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQG  329 (465)
T ss_dssp             GGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCS
T ss_pred             CccccceeeeeEEcCCCeEEEEEEccccccceEEEEcCCCCcEEEEEEEcCCceEeccCCceeEccCCCeeEEEEeeeec
Confidence                 136778999999866654432    2588899999987665543322222    2457899988543   22223


Q ss_pred             C--eEEEEEcc------CCeeeeeccCCCCCeeEE-EECCCCcEEE-EEeCC--CcEEEEeCCCCcCccCCCcccceeee
Q psy17610        359 Q--IVKMWMYR------EGVPCFVGIGHAASITKI-KISPDKKVIV-SVSAD--GGIFLWTFPELEDDVGDSRSLSSKIS  426 (515)
Q Consensus       359 g--~i~i~d~~------~~~~~~~~~~~~~~i~~~-~~~~~~~~l~-~~~~d--g~i~iw~~~~~~~~~~~~~~~~~~~~  426 (515)
                      |  .+....+.      .+.....+....-.|..+ +|+++++.+. ++..+  +.-.+|.+.-..........      
T Consensus       330 g~~~ly~~~~~~~~~~~~~~~~~~LT~G~w~V~~i~~~d~~~~~vyF~a~~~~p~~~hly~v~l~g~~~~~~lt------  403 (465)
T d1xfda1         330 GRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLS------  403 (465)
T ss_dssp             SSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSS------
T ss_pred             ccCceEEEEeccccccCCCceeEEeccCCceEEEEEEEcCCCCEEEEEEeCCCCCceEEEEEECCCCCcceeec------
Confidence            2  34433332      233344444445556665 6888776664 44433  23456655422110000000      


Q ss_pred             cccccccceeeecCcccEEEeeeccCCcEEEEeecC---CeEEEEecCCCeeeeeecc
Q psy17610        427 RSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTN---KMIDYWETCDGSIIRSLEG  481 (515)
Q Consensus       427 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---g~v~iwd~~~~~~~~~~~~  481 (515)
                               ...........+.|||++++++.....   -.+.+++..+++.+..++.
T Consensus       404 ---------~~~~~~~~~~~~~~S~~~~y~v~~~s~~~~P~~~~~~~~~~~~~~~Le~  452 (465)
T d1xfda1         404 ---------CDLVENCTYFSASFSHSMDFFLLKCEGPGVPMVTVHNTTDKKKMFDLET  452 (465)
T ss_dssp             ---------TTSSSSCCCCEEEECTTSSEEEEECCSSSSCCEEEEETTTCCEEEEEEC
T ss_pred             ---------cccCCCCCEEEEEECCCCCEEEEEeecCCCCeEEEEECCCCCEEEEEcC
Confidence                     000112235688999999998854433   4578889888998888864

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=99.43  E-value=8e-10  Score=98.66  Aligned_cols=248  Identities=8%  Similarity=0.011  Sum_probs=151.5

Q ss_pred             ecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeE-EeeccCccCeEEEEeCCCCcEEEEEec---CCcEEEEeC
Q psy17610         78 LKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLT-LVNTCHTSAIYDLQFPVNFSSVFATCS---KNDIRIWSV  153 (515)
Q Consensus        78 ~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~l~~~~~---d~~i~iw~~  153 (515)
                      ......+.-|+|+|++++|+++.. +.+..|.+.....+. ............++++++++.++....   .+++..+.+
T Consensus        36 ~~~~~~~s~la~s~d~~~ly~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~v~~a~~~~~~v~~~~~  114 (365)
T d1jofa_          36 IPQDEPISWMTFDHERKNIYGAAM-KKWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPF  114 (365)
T ss_dssp             CCTTCCCSEEEECTTSSEEEEEEB-TEEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEE
T ss_pred             ccCCCCCCEEEEcCCCCEEEEEeC-CcEEEEEEeCCCCeEEEeeecCCCCcEEEEECCCCCEEEEEEecCCCCEEEEeEc
Confidence            345566778999999999988765 467777765422222 221112334567889999985544332   455665544


Q ss_pred             CCC-ceeEEE---------------E-ecCeEEEEEEEeeCCCEEEEEeC-CCeEEEEecCCC-ceE--EEe-cCCCCCC
Q psy17610        154 RTL-NELLRI---------------S-VMNMICACIVFTYDGKAILSGWN-DGFIRCFTPQSG-KLK--FII-PNAHNRG  211 (515)
Q Consensus       154 ~~~-~~~~~~---------------~-~~~~~v~~~~~~~~~~~l~~~~~-dg~i~~~~~~~~-~~~--~~~-~~~~~~~  211 (515)
                      ... .....+               . .....+.++.|+|+|++++++.. ...|.+|+.... ...  ... .......
T Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~g  194 (365)
T d1jofa_         115 YKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDH  194 (365)
T ss_dssp             SSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCC
T ss_pred             cCCCCcceeEeeeecceecCcccCcccCCCCcceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeeccceeecCCCCc
Confidence            321 111100               0 11224689999999998888764 457888876543 222  111 1234567


Q ss_pred             eEEEEEcCCCCEEEEe-cCCCcEEEEEccCCceeeEEeec-----------------cccCceEEEEEecCCCEEEEEeC
Q psy17610        212 VTALAITQDGTRLLSG-GGEGQVRIWKLTRESQSLQCVLK-----------------EHTSSVSVIQIKSDSKEAMSAST  273 (515)
Q Consensus       212 v~~~~~~~~~~~l~~~-~~d~~i~iw~~~~~~~~~~~~~~-----------------~~~~~v~~~~~~~~~~~l~~~~~  273 (515)
                      ...++|+|+++++.+. ..+++|.+|+++...........                 .+......+.++|+|++++++..
T Consensus       195 Pr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr  274 (365)
T d1jofa_         195 PRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSR  274 (365)
T ss_dssp             EEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEE
T ss_pred             eEEEEECCCCceEEEeccCCCEEEEEEecCCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcc
Confidence            8999999999988654 45789999998655433222111                 11223567889999999887643


Q ss_pred             ------CCcEEEEEcccceEEE---E-EE---cCccEEEEEEcC-CCcEEEEEE-CCCeEEEEeCCCC
Q psy17610        274 ------DGTCVLWDLIKSTRLI---I-MI---LPSMIMSAAYHP-SEVQLITCS-TNKMIDYWETCDG  326 (515)
Q Consensus       274 ------d~~i~iwd~~~~~~~~---~-~~---~~~~~~~~~~~~-~~~~l~~~~-~~~~i~~~d~~~~  326 (515)
                            .+.|..|++.....+.   . ..   .......++++| +|++|+++. .++.|.+|+....
T Consensus       275 ~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~~~  342 (365)
T d1jofa_         275 ANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE  342 (365)
T ss_dssp             ESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred             cCCCccceEEEEEEecCCCceeeEeEeeEEEcCCCCccEEEecCCCCCEEEEEeCCCCeEEEEEEeCC
Confidence                  2237777765432211   1 11   123467789998 789887775 5788999976544

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.43  E-value=3.1e-10  Score=97.08  Aligned_cols=236  Identities=12%  Similarity=0.079  Sum_probs=153.8

Q ss_pred             cEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCC---eEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCE
Q psy17610        147 DIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDG---FIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTR  223 (515)
Q Consensus       147 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  223 (515)
                      .|.|-|.+ |...+.+......+...+|||||+.||......   .+.+.+..++......  .+........|+|+|+.
T Consensus        20 ~l~i~d~d-G~~~~~l~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~spdg~~   96 (269)
T d2hqsa1          20 ELRVSDYD-GYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVA--SFPRHNGAPAFSPDGSK   96 (269)
T ss_dssp             EEEEEETT-SCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEE--CCSSCEEEEEECTTSSE
T ss_pred             EEEEEcCC-CCCcEEEecCCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCceeEEe--eeecccccceecCCCCe
Confidence            47777865 555555655677788899999999999775543   4777777776665443  56778889999999998


Q ss_pred             EEEecC-CCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEe-CCC--cEEEEEcccceEEEEEEcCccEEE
Q psy17610        224 LLSGGG-EGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAS-TDG--TCVLWDLIKSTRLIIMILPSMIMS  299 (515)
Q Consensus       224 l~~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~--~i~iwd~~~~~~~~~~~~~~~~~~  299 (515)
                      ++.... ++...++.......... .............+++++..++..+ .++  .+...++.................
T Consensus        97 i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~  175 (269)
T d2hqsa1          97 LAFALSKTGSLNLYVMDLASGQIR-QVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQD  175 (269)
T ss_dssp             EEEEECTTSSCEEEEEETTTCCEE-ECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEE
T ss_pred             eeEeeecCCccceeecccccccce-eeeeccccccccccccccccceecccccCCceEeeeecccccceeeecccccccc
Confidence            886543 33333333322222222 2223334445556777777655544 344  456666666655555555566788


Q ss_pred             EEEcCCCcEEEEEECCC---eEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcC---CCeEEEEEccCCeeee
Q psy17610        300 AAYHPSEVQLITCSTNK---MIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA---DQIVKMWMYREGVPCF  373 (515)
Q Consensus       300 ~~~~~~~~~l~~~~~~~---~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~~  373 (515)
                      ..++|+++.++..+.++   .+.+.+...+..  ...... .......|+|||+.|+..+.   ...++++++..+.. .
T Consensus       176 ~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~-~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~dg~~~-~  251 (269)
T d2hqsa1         176 ADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV--QVLSST-FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFK-A  251 (269)
T ss_dssp             EEECTTSSEEEEEEECSSCEEEEEEETTTCCE--EECCCS-SSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCE-E
T ss_pred             cccccccceeEEEeecCCceeeeEeecccccc--eEeecC-ccccceEECCCCCEEEEEEcCCCCcEEEEEECCCCCE-E
Confidence            89999999988776543   455556555543  222222 45567899999999875543   34688999976654 4


Q ss_pred             eccCCCCCeeEEEECCC
Q psy17610        374 VGIGHAASITKIKISPD  390 (515)
Q Consensus       374 ~~~~~~~~i~~~~~~~~  390 (515)
                      .+....+.+...+|||-
T Consensus       252 ~lt~~~g~~~~p~WSP~  268 (269)
T d2hqsa1         252 RLPATDGQVKFPAWSPY  268 (269)
T ss_dssp             ECCCSSSEEEEEEECCC
T ss_pred             EEeCCCCcEEeEEeCCC
Confidence            55566778888999983

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.41  E-value=4.6e-10  Score=96.03  Aligned_cols=221  Identities=11%  Similarity=0.049  Sum_probs=143.1

Q ss_pred             EecCCCcEEEEEEecCCCEEEEEecC---ceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec-CCc--EEE
Q psy17610         77 LLKDDSGISSLQYNPVNNKVFVGTVN---CEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS-KND--IRI  150 (515)
Q Consensus        77 ~~~~~~~v~~~~~s~~~~~l~~~~~d---~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-d~~--i~i  150 (515)
                      +..+...+..-+|||||+.||.....   ..+.+.+..++....  +..+.+......|+|+|+.++.... ++.  +..
T Consensus        34 l~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~  111 (269)
T d2hqsa1          34 VHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ--VASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYV  111 (269)
T ss_dssp             EEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEE--EECCSSCEEEEEECTTSSEEEEEECTTSSCEEEE
T ss_pred             EecCCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCceeE--EeeeecccccceecCCCCeeeEeeecCCccceee
Confidence            33456778899999999999987544   357777877754332  3337788899999999999888775 333  333


Q ss_pred             EeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEe-CCC--eEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEe
Q psy17610        151 WSVRTLNELLRISVMNMICACIVFTYDGKAILSGW-NDG--FIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSG  227 (515)
Q Consensus       151 w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg--~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  227 (515)
                      +....... ..............++++++.++..+ .++  .|...++..+.....  ..+........|+|+++.++..
T Consensus       112 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~spdg~~~~~~  188 (269)
T d2hqsa1         112 MDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRI--TWEGSQNQDADVSSDGKFMVMV  188 (269)
T ss_dssp             EETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEEC--CCSSSEEEEEEECTTSSEEEEE
T ss_pred             cccccccc-eeeeeccccccccccccccccceecccccCCceEeeeecccccceee--ecccccccccccccccceeEEE
Confidence            33332222 22222333344556777777655444 344  466667766655433  3456667788999999988866


Q ss_pred             cC-CCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCC---CcEEEEEcccceEEEEEEcCccEEEEEEc
Q psy17610        228 GG-EGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTD---GTCVLWDLIKSTRLIIMILPSMIMSAAYH  303 (515)
Q Consensus       228 ~~-d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~  303 (515)
                      +. .+...+|..........  ...+........|+|||+.|+..+..   ..+.++++..+...........+...+|+
T Consensus       189 ~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~dg~~~~~lt~~~g~~~~p~WS  266 (269)
T d2hqsa1         189 SSNGGQQHIAKQDLATGGVQ--VLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWS  266 (269)
T ss_dssp             EECSSCEEEEEEETTTCCEE--ECCCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECCCSSSEEEEEEEC
T ss_pred             eecCCceeeeEeecccccce--EeecCccccceEECCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEeCCCCcEEeEEeC
Confidence            54 34555555443333322  22345566778999999998866543   46889999877766655566677788888


Q ss_pred             C
Q psy17610        304 P  304 (515)
Q Consensus       304 ~  304 (515)
                      |
T Consensus       267 P  267 (269)
T d2hqsa1         267 P  267 (269)
T ss_dssp             C
T ss_pred             C
Confidence            7

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.38  E-value=2e-10  Score=97.37  Aligned_cols=237  Identities=8%  Similarity=-0.011  Sum_probs=155.2

Q ss_pred             CCeEEEEEcCCCCEEEEe-cCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEE
Q psy17610        210 RGVTALAITQDGTRLLSG-GGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRL  288 (515)
Q Consensus       210 ~~v~~~~~~~~~~~l~~~-~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~  288 (515)
                      .....++++++|+..++. +..+.+..++.... ........+ ......++++++++.+++....+.+++++-.+....
T Consensus        14 ~~P~~vavd~dG~i~v~~~~~~~~i~~~~~~~~-~~~~~~~~~-~~~p~gvav~~~g~i~v~d~~~~~i~~~~~~~~~~~   91 (260)
T d1rwia_          14 LSPSGVAVDSAGNVYVTSEGMYGRVVKLATGST-GTTVLPFNG-LYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTV   91 (260)
T ss_dssp             CCEEEEEECTTCCEEEEECSSSCEEEEEC-----CEEECCCCS-CCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEE
T ss_pred             CCCCEEEEcCCCCEEEEEcCCCCEEEEEcCCCc-eEEEeccCC-ccCceEEEEcCCCCEEEeeeeeceeeeeeeccceee
Confidence            456899999999976654 45577777766422 222222222 234567899999987777666666666665555444


Q ss_pred             EEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccC
Q psy17610        289 IIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYRE  368 (515)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~  368 (515)
                      ........+..+++.++++.+++-..+..+..++........ ...........++++++++++++...++.|..++.+.
T Consensus        92 ~~~~~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~  170 (260)
T d1rwia_          92 LPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTV-LPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAES  170 (260)
T ss_dssp             CCCCSCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEE-CCCCSCCSCCEEEECTTCCEEEEEGGGTEEEEECTTT
T ss_pred             eeeeeeeecccccccccceeEeeccccccccccccccceeee-eeecccCCcceeeecCCCCEeeecccccccccccccc
Confidence            333334567899999999988877677778888765544322 2222224567899999999888888889999999876


Q ss_pred             CeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEee
Q psy17610        369 GVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAA  448 (515)
Q Consensus       369 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  448 (515)
                      ..........-.....+++.++++++++....+.|..++...........                    ..-.....++
T Consensus       171 ~~~~~~~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~~~~~~~~--------------------~~~~~P~~i~  230 (260)
T d1rwia_         171 NNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPF--------------------TGLNTPLAVA  230 (260)
T ss_dssp             CCEEECCCSSCCSEEEEEECTTCCEEEEETTTTEEEEECTTCSCCEECCC--------------------CSCCCEEEEE
T ss_pred             ceeeeeeccccCCCccceeeeeeeeeeeecCCCEEEEEeCCCCeEEEEcc--------------------CCCCCeEEEE
Confidence            54444333455667899999999988888778888888754432111000                    0112367899


Q ss_pred             eccCCcEEEEeecCCeEEEEe
Q psy17610        449 YHPSEVQLITCSTNKMIDYWE  469 (515)
Q Consensus       449 ~s~~~~~l~~~~~dg~v~iwd  469 (515)
                      ++++|.++++-..+++|+.++
T Consensus       231 ~d~~g~l~vad~~~~rI~~i~  251 (260)
T d1rwia_         231 VDSDRTVYVADRGNDRVVKLT  251 (260)
T ss_dssp             ECTTCCEEEEEGGGTEEEEEC
T ss_pred             EeCCCCEEEEECCCCEEEEEe
Confidence            999988777666666666554

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=99.36  E-value=9e-10  Score=95.67  Aligned_cols=235  Identities=9%  Similarity=-0.011  Sum_probs=159.5

Q ss_pred             EEecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCCC
Q psy17610         76 YLLKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVRT  155 (515)
Q Consensus        76 ~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~  155 (515)
                      ...+-...+..++++|||+++++...+++|+.|+.... ...  +......+.+++|+|+|+.+++...++.+..|+...
T Consensus        22 ~~~p~~~~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g~-~~~--~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~   98 (302)
T d2p4oa1          22 TSFPVNTFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQI--HATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVK   98 (302)
T ss_dssp             EEECTTCCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEE--EEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred             EECCCCCCcCCEEECCCCCEEEEeCCCCEEEEEeCCCC-EEE--EEcCCCCcceEEEcCCCCeEEEecCCceEEEEEecc
Confidence            33444557889999999999999888999999997653 222  223556789999999999888877888888887654


Q ss_pred             Cce-eEEEE--ecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecC---------CCCCCeEEEEEcCCCCE
Q psy17610        156 LNE-LLRIS--VMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPN---------AHNRGVTALAITQDGTR  223 (515)
Q Consensus       156 ~~~-~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~  223 (515)
                      ... ...+.  ........+++.++++++++.+.++.+..++...+........         ........+.+.. +..
T Consensus        99 ~~~~~~~~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~~-~~l  177 (302)
T d2p4oa1          99 SDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFG-NFL  177 (302)
T ss_dssp             TTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEET-TEE
T ss_pred             cccceeeccccCCccccceeEEccCCCEEeeccccccceeeeccCCcceeEecCCccceeeccCcccccccccccC-Cce
Confidence            332 22222  2334578899999999888888889999999887754432211         1123356666654 345


Q ss_pred             EEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC---ccEEEE
Q psy17610        224 LLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP---SMIMSA  300 (515)
Q Consensus       224 l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~---~~~~~~  300 (515)
                      +++.+..+.|..++.....................+++.++|+++++...++.|..++... +........   ....++
T Consensus       178 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~pdgia~d~dG~l~va~~~~~~V~~i~p~G-~~~~~~~~~~~~~~pt~v  256 (302)
T d2p4oa1         178 YVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDR-STTIIAQAEQGVIGSTAV  256 (302)
T ss_dssp             EEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTTC-CEEEEECGGGTCTTEEEE
T ss_pred             eeecCCCCeEEeccccccccccccccccCCCCCcceEECCCCCEEEEEcCCCcEEEECCCC-CEEEEEecCCCCCCceEE
Confidence            5566777888888876432222212222334567799999999888888889999998753 333333222   357899


Q ss_pred             EE---cCCCcEEEEEECC
Q psy17610        301 AY---HPSEVQLITCSTN  315 (515)
Q Consensus       301 ~~---~~~~~~l~~~~~~  315 (515)
                      +|   .+|++.|++++..
T Consensus       257 afg~~~~D~~~Lyvtt~~  274 (302)
T d2p4oa1         257 AFGQTEGDCTAIYVVTNG  274 (302)
T ss_dssp             EECCSTTTTTEEEEEECT
T ss_pred             EEcCCCCCCCEEEEECCC
Confidence            99   6788888776554

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=99.35  E-value=1.1e-09  Score=95.02  Aligned_cols=229  Identities=10%  Similarity=-0.022  Sum_probs=156.7

Q ss_pred             ceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCC--ceEEEE
Q psy17610        255 SVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDG--SIIRSL  332 (515)
Q Consensus       255 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~--~~~~~~  332 (515)
                      .+..+++.|||+++++...+++|..++.. ++..........+..+++.++++++++...++.+..++....  ......
T Consensus        29 ~~e~iAv~pdG~l~vt~~~~~~I~~i~p~-g~~~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~~~  107 (302)
T d2p4oa1          29 FLENLASAPDGTIFVTNHEVGEIVSITPD-GNQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLL  107 (302)
T ss_dssp             CEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred             CcCCEEECCCCCEEEEeCCCCEEEEEeCC-CCEEEEEcCCCCcceEEEcCCCCeEEEecCCceEEEEEecccccceeecc
Confidence            57789999999999998889999999854 455555667788999999999999999888888887775443  333333


Q ss_pred             ecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeecc----------CCCCCeeEEEECCCCcEEEEEeCCCc
Q psy17610        333 EGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGI----------GHAASITKIKISPDKKVIVSVSADGG  402 (515)
Q Consensus       333 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~----------~~~~~i~~~~~~~~~~~l~~~~~dg~  402 (515)
                      ........+.+++.++++++++.+.++.+..++...+.......          ........+.+.. +.++++.+..+.
T Consensus       108 ~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~~-~~l~~~~~~~~~  186 (302)
T d2p4oa1         108 TLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFG-NFLYVSNTEKML  186 (302)
T ss_dssp             ECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEET-TEEEEEETTTTE
T ss_pred             ccCCccccceeEEccCCCEEeeccccccceeeeccCCcceeEecCCccceeeccCcccccccccccC-CceeeecCCCCe
Confidence            33344668899999999999998889999988887664322111          1122345666653 344555566778


Q ss_pred             EEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeee--eeec
Q psy17610        403 IFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSII--RSLE  480 (515)
Q Consensus       403 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~--~~~~  480 (515)
                      |..+++..........                  ..........+++.++|++.++...++.|..++.. ++..  ....
T Consensus       187 i~~~~~~~~~~~~~~~------------------~~~~~~~pdgia~d~dG~l~va~~~~~~V~~i~p~-G~~~~~~~~~  247 (302)
T d2p4oa1         187 LLRIPVDSTDKPGEPE------------------IFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAE  247 (302)
T ss_dssp             EEEEEBCTTSCBCCCE------------------EEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGG
T ss_pred             EEeccccccccccccc------------------cccCCCCCcceEECCCCCEEEEEcCCCcEEEECCC-CCEEEEEecC
Confidence            8888776432111000                  00011225679999999988888889999999865 4432  2233


Q ss_pred             ccccceEEEEEE---cCCCcEEEEeecC
Q psy17610        481 GSDVAAVNCVDF---VDDGKYFLTGGAD  505 (515)
Q Consensus       481 ~~~~~~v~~~~~---s~~~~~l~s~~~d  505 (515)
                      ... ...++++|   ++|++.|..++..
T Consensus       248 ~~~-~~pt~vafg~~~~D~~~Lyvtt~~  274 (302)
T d2p4oa1         248 QGV-IGSTAVAFGQTEGDCTAIYVVTNG  274 (302)
T ss_dssp             GTC-TTEEEEEECCSTTTTTEEEEEECT
T ss_pred             CCC-CCceEEEEcCCCCCCCEEEEECCC
Confidence            222 56889999   7788877765443

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.35  E-value=3e-10  Score=96.32  Aligned_cols=234  Identities=9%  Similarity=0.013  Sum_probs=154.1

Q ss_pred             ceEEEEEecCCCEEEEEe-CCCcEEEEEcccceEEEEE-EcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEE
Q psy17610        255 SVSVIQIKSDSKEAMSAS-TDGTCVLWDLIKSTRLIIM-ILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSL  332 (515)
Q Consensus       255 ~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~  332 (515)
                      ....++++++|+..++.. ..+.+..++.......... ........++++++++.+++...++.+++++..+...+...
T Consensus        15 ~P~~vavd~dG~i~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~gvav~~~g~i~v~d~~~~~i~~~~~~~~~~~~~~   94 (260)
T d1rwia_          15 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPF   94 (260)
T ss_dssp             CEEEEEECTTCCEEEEECSSSCEEEEEC----CEEECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEECCC
T ss_pred             CCCEEEEcCCCCEEEEEcCCCCEEEEEcCCCceEEEeccCCccCceEEEEcCCCCEEEeeeeeceeeeeeeccceeeeee
Confidence            457899999999766654 4466777665443322221 22235678899999998877777777777665555544333


Q ss_pred             ecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCCCCc
Q psy17610        333 EGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFPELE  412 (515)
Q Consensus       333 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  412 (515)
                      ..  ......+++.++++++++-..+..+..++...................++++++++++++...++.|..++.....
T Consensus        95 ~~--~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~~  172 (260)
T d1rwia_          95 DG--LNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNN  172 (260)
T ss_dssp             CS--CCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEECCCCSCCSCCEEEECTTCCEEEEEGGGTEEEEECTTTCC
T ss_pred             ee--eeecccccccccceeEeeccccccccccccccceeeeeeecccCCcceeeecCCCCEeeeccccccccccccccce
Confidence            22  2567899999999988887777778888775544333222233456789999999988888888889999876532


Q ss_pred             CccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEE
Q psy17610        413 DDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDF  492 (515)
Q Consensus       413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~  492 (515)
                      .....                    ...-.....+++.++|+++++....+.|..++..... ...+..........|++
T Consensus       173 ~~~~~--------------------~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~~-~~~~~~~~~~~P~~i~~  231 (260)
T d1rwia_         173 QVVLP--------------------FTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT-STVLPFTGLNTPLAVAV  231 (260)
T ss_dssp             EEECC--------------------CSSCCSEEEEEECTTCCEEEEETTTTEEEEECTTCSC-CEECCCCSCCCEEEEEE
T ss_pred             eeeee--------------------ccccCCCccceeeeeeeeeeeecCCCEEEEEeCCCCe-EEEEccCCCCCeEEEEE
Confidence            11100                    0112336788999999988888888888888865443 22332222256789999


Q ss_pred             cCCCcEEEEeecCCeEEEE
Q psy17610        493 VDDGKYFLTGGADQIVKIC  511 (515)
Q Consensus       493 s~~~~~l~s~~~dg~v~iw  511 (515)
                      +++|.++++-..++.|+.+
T Consensus       232 d~~g~l~vad~~~~rI~~i  250 (260)
T d1rwia_         232 DSDRTVYVADRGNDRVVKL  250 (260)
T ss_dssp             CTTCCEEEEEGGGTEEEEE
T ss_pred             eCCCCEEEEECCCCEEEEE
Confidence            9999988876667766654

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=99.35  E-value=1.7e-09  Score=94.02  Aligned_cols=242  Identities=12%  Similarity=0.112  Sum_probs=157.0

Q ss_pred             EEEEEEeeCCCEEEEEeC-------CCeEEEEecCCCceEEEec---CCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEc
Q psy17610        169 CACIVFTYDGKAILSGWN-------DGFIRCFTPQSGKLKFIIP---NAHNRGVTALAITQDGTRLLSGGGEGQVRIWKL  238 (515)
Q Consensus       169 v~~~~~~~~~~~l~~~~~-------dg~i~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~  238 (515)
                      ...++|.++|+..++...       ++.|..||..++.......   .........+.|.++++.++++...+.+..++.
T Consensus        20 ~EGpa~d~dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~l~vad~~~~i~~~~~   99 (314)
T d1pjxa_          20 AEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQT   99 (314)
T ss_dssp             CEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEET
T ss_pred             CeEeEEeCCCCEEEEECccccccccCCEEEEEECCCCcEEEEECCccccCCCcceeEEEeCCCCEEEEEECCCeEEEEeC
Confidence            356789999987665432       4679999998877644331   111233678999999998888777677888887


Q ss_pred             cCCceeeEEe-eccc-cCceEEEEEecCCCEEEEEeC---------------CCcEEEEEcccceEEEEEEcCccEEEEE
Q psy17610        239 TRESQSLQCV-LKEH-TSSVSVIQIKSDSKEAMSAST---------------DGTCVLWDLIKSTRLIIMILPSMIMSAA  301 (515)
Q Consensus       239 ~~~~~~~~~~-~~~~-~~~v~~~~~~~~~~~l~~~~~---------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~  301 (515)
                      +......... ..+. -.....+++.++|+..++-..               .|.|..++.. ++.......-.....++
T Consensus       100 ~g~~~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~d-g~~~~~~~~~~~pNGi~  178 (314)
T d1pjxa_         100 DGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFPNGIA  178 (314)
T ss_dssp             TSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSEEEEE
T ss_pred             CCcEEEEEeccccccccCCCcEEEECCCCCEEEecCccCcccccccceeccCCceEEEEeec-CceeEeeCCcceeeeeE
Confidence            5332221111 1111 113577899999987776432               2334444432 33333333333456788


Q ss_pred             EcCCCc----EE-EEEECCCeEEEEeCCCCceEE------EEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCe
Q psy17610        302 YHPSEV----QL-ITCSTNKMIDYWETCDGSIIR------SLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGV  370 (515)
Q Consensus       302 ~~~~~~----~l-~~~~~~~~i~~~d~~~~~~~~------~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~  370 (515)
                      |+|++.    .| ++-+..+.|..||+.....+.      .+..........+++.++|++.++....+.|.+||.+.++
T Consensus       179 ~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~g~I~~~dp~~g~  258 (314)
T d1pjxa_         179 VRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQ  258 (314)
T ss_dssp             EEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBS
T ss_pred             ECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEccccccccceeeEEecCCcEEEEEcCCCEEEEEeCCCCE
Confidence            988764    44 444567889998876443332      1222222346789999999988888788999999998887


Q ss_pred             eeeeccCCCCCeeEEEECCCCcEE-EEEeCCCcEEEEeCCCC
Q psy17610        371 PCFVGIGHAASITKIKISPDKKVI-VSVSADGGIFLWTFPEL  411 (515)
Q Consensus       371 ~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~iw~~~~~  411 (515)
                      ....+.......++++|.||++.| ++.+.++.|...++...
T Consensus       259 ~~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~~~  300 (314)
T d1pjxa_         259 PKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN  300 (314)
T ss_dssp             CSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred             EEEEEECCCCCEEEEEEeCCCCEEEEEECCCCcEEEEECCCC
Confidence            766666666778999999998754 55566788888777543

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.34  E-value=5.6e-09  Score=89.33  Aligned_cols=237  Identities=10%  Similarity=0.054  Sum_probs=162.8

Q ss_pred             cEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeec-----cCccCeEEEEeCCCC-cEEEEEec-CCcEEEEeCCC
Q psy17610         83 GISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNT-----CHTSAIYDLQFPVNF-SSVFATCS-KNDIRIWSVRT  155 (515)
Q Consensus        83 ~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~-----~h~~~v~~~~~~~~~-~~l~~~~~-d~~i~iw~~~~  155 (515)
                      ....|+++|+|+++++-..++.|++||.+. ..+...-.     +....-..+++.++. ..+++... ++.|..++. .
T Consensus        24 ~P~gvavd~dg~i~VaD~~n~rI~v~d~~G-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~  101 (279)
T d1q7fa_          24 EPSGVAVNAQNDIIVADTNNHRIQIFDKEG-RFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQ-Y  101 (279)
T ss_dssp             CEEEEEECTTCCEEEEEGGGTEEEEECTTS-CEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECT-T
T ss_pred             CccEEEEcCCCCEEEEECCCCEEEEEeCCC-CEEEEecccCCCcccccccccccccccccccceeccCCccccccccc-c
Confidence            468999999999777766788999999764 44443311     111233456655543 34443333 567777775 4


Q ss_pred             CceeEEEEe-cCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEe-cCCCCCCeEEEEEcCCCCEEEEecCCCcE
Q psy17610        156 LNELLRISV-MNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFII-PNAHNRGVTALAITQDGTRLLSGGGEGQV  233 (515)
Q Consensus       156 ~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i  233 (515)
                      ++....+.. .......+++.+++..+++....+.+.+++.. ++.+..+ ...+......+++.++++.+++....+.|
T Consensus       102 g~~~~~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~-g~~~~~~g~~~~~~~~~~i~~d~~g~i~v~d~~~~~V  180 (279)
T d1q7fa_         102 GQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCV  180 (279)
T ss_dssp             SCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEE
T ss_pred             ccceeecCCCcccccceeccccCCcEEEEeeccceeeEeccC-CceeecccccccccccceeeeccceeEEeeeccccce
Confidence            566555532 23345788899999988887778889999865 4444443 24466778899999999988888888999


Q ss_pred             EEEEccCCceeeEEee--ccccCceEEEEEecCCCEEEEEeC-CCcEEEEEcccceEEEEEEcC---ccEEEEEEcCCCc
Q psy17610        234 RIWKLTRESQSLQCVL--KEHTSSVSVIQIKSDSKEAMSAST-DGTCVLWDLIKSTRLIIMILP---SMIMSAAYHPSEV  307 (515)
Q Consensus       234 ~iw~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~  307 (515)
                      .+||...   .....+  .+.......+++.++|+.+++-.. ++.|.+++. +++.+..+...   .....+++.|++.
T Consensus       181 ~~~d~~G---~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~-~G~~~~~~~~~~~~~~p~~vav~~dG~  256 (279)
T d1q7fa_         181 KVFNYEG---QYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGS  256 (279)
T ss_dssp             EEEETTC---CEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTE
T ss_pred             eeeecCC---ceeeeecccccccCCcccccccCCeEEEEECCCCcEEEEECC-CCCEEEEEeCCCCCCCEeEEEEeCCCc
Confidence            9999742   333333  334556789999999997776544 456899984 57666665443   3578999999997


Q ss_pred             EEEEEECCCeEEEEeCCCCc
Q psy17610        308 QLITCSTNKMIDYWETCDGS  327 (515)
Q Consensus       308 ~l~~~~~~~~i~~~d~~~~~  327 (515)
                      ++ ++..+..|++|......
T Consensus       257 l~-V~~~n~~v~~fr~~~~~  275 (279)
T d1q7fa_         257 VV-LASKDYRLYIYRYVQLA  275 (279)
T ss_dssp             EE-EEETTTEEEEEECSCCC
T ss_pred             EE-EEeCCCeEEEEEeeeec
Confidence            54 45678999999876653

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=99.33  E-value=5.7e-09  Score=90.66  Aligned_cols=237  Identities=9%  Similarity=0.040  Sum_probs=157.2

Q ss_pred             CeEEEEeCCCCcEEEEEec-------CCcEEEEeCCCCceeEEEEec----CeEEEEEEEeeCCCEEEEEeCCCeEEEEe
Q psy17610        126 AIYDLQFPVNFSSVFATCS-------KNDIRIWSVRTLNELLRISVM----NMICACIVFTYDGKAILSGWNDGFIRCFT  194 (515)
Q Consensus       126 ~v~~~~~~~~~~~l~~~~~-------d~~i~iw~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~dg~i~~~~  194 (515)
                      ....++|.|+|+.+++...       +++|..||.+++.........    ......++|.++++.++++...+.+..++
T Consensus        19 g~EGpa~d~dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~l~vad~~~~i~~~~   98 (314)
T d1pjxa_          19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQ   98 (314)
T ss_dssp             TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEE
T ss_pred             CCeEeEEeCCCCEEEEECccccccccCCEEEEEECCCCcEEEEECCccccCCCcceeEEEeCCCCEEEEEECCCeEEEEe
Confidence            3567899999987666433       467888998877643332211    11246799999999888888777888899


Q ss_pred             cCCCceEEEecCCCC----CCeEEEEEcCCCCEEEEecC---------------CCcEEEEEccCCceeeEEeeccccCc
Q psy17610        195 PQSGKLKFIIPNAHN----RGVTALAITQDGTRLLSGGG---------------EGQVRIWKLTRESQSLQCVLKEHTSS  255 (515)
Q Consensus       195 ~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~---------------d~~i~iw~~~~~~~~~~~~~~~~~~~  255 (515)
                      .+.+...... ....    ...+.+++.++|++.++-..               .|.|..++.+   ..... +......
T Consensus        99 ~~g~~~~~~~-~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~d---g~~~~-~~~~~~~  173 (314)
T d1pjxa_          99 TDGTFEEIAK-KDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD---GQMIQ-VDTAFQF  173 (314)
T ss_dssp             TTSCEEECCS-BCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT---SCEEE-EEEEESS
T ss_pred             CCCcEEEEEe-ccccccccCCCcEEEECCCCCEEEecCccCcccccccceeccCCceEEEEeec---CceeE-eeCCcce
Confidence            7765433221 1111    13578999999988776422               2334444432   12221 1222334


Q ss_pred             eEEEEEecCCC-----EEEEEeCCCcEEEEEcccceEEEE---E-EcC----ccEEEEEEcCCCcEEEEEECCCeEEEEe
Q psy17610        256 VSVIQIKSDSK-----EAMSASTDGTCVLWDLIKSTRLII---M-ILP----SMIMSAAYHPSEVQLITCSTNKMIDYWE  322 (515)
Q Consensus       256 v~~~~~~~~~~-----~l~~~~~d~~i~iwd~~~~~~~~~---~-~~~----~~~~~~~~~~~~~~l~~~~~~~~i~~~d  322 (515)
                      ...++|+|+++     ++++-+..+.|..||+.....+..   + ..+    .....+++.++|+..++....+.|.+||
T Consensus       174 pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~g~I~~~d  253 (314)
T d1pjxa_         174 PNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFG  253 (314)
T ss_dssp             EEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEEC
T ss_pred             eeeeEECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEccccccccceeeEEecCCcEEEEEcCCCEEEEEe
Confidence            46889998765     344556678898888764322221   1 111    2356899999999988888899999999


Q ss_pred             CCCCceEEEEecCCCccEEEEEEcCCCC-EEEEEcCCCeEEEEEccC
Q psy17610        323 TCDGSIIRSLEGSDVAAVNCVDFVDDGK-YFLTGGADQIVKMWMYRE  368 (515)
Q Consensus       323 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~i~d~~~  368 (515)
                      ...++....+..+. ...++++|.|+++ ++++.+.+|.|..+++..
T Consensus       254 p~~g~~~~~i~~p~-~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~~  299 (314)
T d1pjxa_         254 PDGGQPKMRIRCPF-EKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR  299 (314)
T ss_dssp             TTCBSCSEEEECSS-SCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred             CCCCEEEEEEECCC-CCEEEEEEeCCCCEEEEEECCCCcEEEEECCC
Confidence            98888877777665 5778999999987 456667788888888643

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.29  E-value=1.8e-08  Score=86.07  Aligned_cols=235  Identities=11%  Similarity=0.168  Sum_probs=162.6

Q ss_pred             EEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCC-----CCCCeEEEEEcCCC-CEEEE-ecCCCcEEEEEccCC
Q psy17610        169 CACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNA-----HNRGVTALAITQDG-TRLLS-GGGEGQVRIWKLTRE  241 (515)
Q Consensus       169 v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~-~~l~~-~~~d~~i~iw~~~~~  241 (515)
                      ...++++++++.+++-..+..|++||.+ |+.+..+...     .......+++.++. ..+++ .+.++.|..++..  
T Consensus        25 P~gvavd~dg~i~VaD~~n~rI~v~d~~-G~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--  101 (279)
T d1q7fa_          25 PSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQY--  101 (279)
T ss_dssp             EEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTT--
T ss_pred             ccEEEEcCCCCEEEEECCCCEEEEEeCC-CCEEEEecccCCCcccccccccccccccccccceeccCCcccccccccc--
Confidence            4788999999977777778899999965 6665555221     22234566666543 33433 3445577777653  


Q ss_pred             ceeeEEee-ccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcC---ccEEEEEEcCCCcEEEEEECCCe
Q psy17610        242 SQSLQCVL-KEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILP---SMIMSAAYHPSEVQLITCSTNKM  317 (515)
Q Consensus       242 ~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~  317 (515)
                       ......+ .........+++.+++..+++....+.+.+++.. ++.+..+...   .....+++.++++.+++....+.
T Consensus       102 -g~~~~~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~-g~~~~~~g~~~~~~~~~~i~~d~~g~i~v~d~~~~~  179 (279)
T d1q7fa_         102 -GQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHC  179 (279)
T ss_dssp             -SCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTE
T ss_pred             -ccceeecCCCcccccceeccccCCcEEEEeeccceeeEeccC-CceeecccccccccccceeeeccceeEEeeeccccc
Confidence             2223232 2344567789999999988887777888888864 4555555333   35788899999998888888999


Q ss_pred             EEEEeCCCCceEEEEecC-CCccEEEEEEcCCCCEEEEEcC-CCeEEEEEccCCeeeeeccC--CCCCeeEEEECCCCcE
Q psy17610        318 IDYWETCDGSIIRSLEGS-DVAAVNCVDFVDDGKYFLTGGA-DQIVKMWMYREGVPCFVGIG--HAASITKIKISPDKKV  393 (515)
Q Consensus       318 i~~~d~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~--~~~~i~~~~~~~~~~~  393 (515)
                      |++||. +++.+.++... .......+++.++|+++++-.. ++.|.+|+. +|+.+..+..  .......+++.|+|.+
T Consensus       180 V~~~d~-~G~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~-~G~~~~~~~~~~~~~~p~~vav~~dG~l  257 (279)
T d1q7fa_         180 VKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSV  257 (279)
T ss_dssp             EEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEE
T ss_pred             eeeeec-CCceeeeecccccccCCcccccccCCeEEEEECCCCcEEEEECC-CCCEEEEEeCCCCCCCEeEEEEeCCCcE
Confidence            999996 56667776432 2245788999999998777544 457999985 5776655532  2345789999999975


Q ss_pred             EEEEeCCCcEEEEeCCCC
Q psy17610        394 IVSVSADGGIFLWTFPEL  411 (515)
Q Consensus       394 l~~~~~dg~i~iw~~~~~  411 (515)
                      ++ ++.+..|++|+....
T Consensus       258 ~V-~~~n~~v~~fr~~~~  274 (279)
T d1q7fa_         258 VL-ASKDYRLYIYRYVQL  274 (279)
T ss_dssp             EE-EETTTEEEEEECSCC
T ss_pred             EE-EeCCCeEEEEEeeee
Confidence            54 567899999998764

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.28  E-value=2e-08  Score=87.53  Aligned_cols=230  Identities=16%  Similarity=0.126  Sum_probs=150.4

Q ss_pred             EEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCC--CcEEEEEccCCceee
Q psy17610        168 ICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGE--GQVRIWKLTRESQSL  245 (515)
Q Consensus       168 ~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--~~i~iw~~~~~~~~~  245 (515)
                      .+..++|.++|+..++-...+.|..|+.++++..... .........++++++|+++++...+  ....++.+.......
T Consensus        41 ~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~~~~~~-~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~~~~  119 (319)
T d2dg1a1          41 QLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPF-VSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNL  119 (319)
T ss_dssp             CEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEE-ECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSC
T ss_pred             CcEeCEECCCCCEEEEECCCCEEEEEECCCCeEEEEE-eCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCCCcee
Confidence            4467899999997777778899999998887765554 3455678999999999987765432  233444443232222


Q ss_pred             EEeec--cccCceEEEEEecCCCEEEEEeC------CCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEE-ECCC
Q psy17610        246 QCVLK--EHTSSVSVIQIKSDSKEAMSAST------DGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITC-STNK  316 (515)
Q Consensus       246 ~~~~~--~~~~~v~~~~~~~~~~~l~~~~~------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~  316 (515)
                      .....  .-......+.+.++|++.++...      .+.+..++............-.....++|+|+++.|+.+ +..+
T Consensus       120 ~~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~~~~~~~~~~~pnGia~s~dg~~lyvad~~~~  199 (319)
T d2dg1a1         120 QDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTAN  199 (319)
T ss_dssp             EEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGT
T ss_pred             eeeccCCCcccCCcceeEEeccceeecccccccccCcceeEEEecccceeEEEeeccceeeeeeeccccceEEEecccCC
Confidence            22221  12334678899999986665432      123555554443333333333456789999999876555 5578


Q ss_pred             eEEEEeCCCC-ceEEE------EecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeecc------CCCCCee
Q psy17610        317 MIDYWETCDG-SIIRS------LEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGI------GHAASIT  383 (515)
Q Consensus       317 ~i~~~d~~~~-~~~~~------~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~------~~~~~i~  383 (515)
                      .|..|++... .....      ...........+++.++|++.++....+.|.+||. .|+.+..+.      ++...++
T Consensus       200 ~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p-~G~~l~~i~~P~~~~~~~~~~~  278 (319)
T d2dg1a1         200 RLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRST  278 (319)
T ss_dssp             EEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCC
T ss_pred             ceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECC-CCcEEEEEeCCCcCCCcCceee
Confidence            9999987543 21111      11111234678999999998888888999999996 677776553      3345678


Q ss_pred             EEEECCCCcEEEEEeC
Q psy17610        384 KIKISPDKKVIVSVSA  399 (515)
Q Consensus       384 ~~~~~~~~~~l~~~~~  399 (515)
                      +++|.++...+++...
T Consensus       279 ~~~~~~~~~~~~~t~~  294 (319)
T d2dg1a1         279 HPQFIPGTNQLIICSN  294 (319)
T ss_dssp             EEEECTTSCEEEEEEE
T ss_pred             eEEEeCCCCEEEEEcC
Confidence            9999998877766654

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=1.9e-09  Score=99.19  Aligned_cols=220  Identities=10%  Similarity=0.026  Sum_probs=139.9

Q ss_pred             EEeeCCCEEEEEeCCCeEEEEecCCCceEEEecC--CCCCCeEEEEEcCCCCEEEEec---------CCCcEEEEEccCC
Q psy17610        173 VFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPN--AHNRGVTALAITQDGTRLLSGG---------GEGQVRIWKLTRE  241 (515)
Q Consensus       173 ~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~---------~d~~i~iw~~~~~  241 (515)
                      .|.+++.++. -..+|.|.+||+.+++....+..  .....+....|+||+++++...         ..+.+.++|+..+
T Consensus        23 ~W~~~~~~~~-~~~~g~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~  101 (465)
T d1xfda1          23 KWISDTEFIY-REQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHG  101 (465)
T ss_dssp             CBSSSSCBCC-CCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSC
T ss_pred             EEeCCCcEEE-EeCCCcEEEEECCCCCEEEEEcCccccccccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCC
Confidence            5777776554 35678899999998876544421  1234577888999999988753         3577899999765


Q ss_pred             ceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCc--c-----------------EEEEEE
Q psy17610        242 SQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPS--M-----------------IMSAAY  302 (515)
Q Consensus       242 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--~-----------------~~~~~~  302 (515)
                      ....+.........+....|+|||+.++... ++.|.+.+...+...+......  .                 -..+-|
T Consensus       102 ~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~-~~nl~~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~W  180 (465)
T d1xfda1         102 DPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWW  180 (465)
T ss_dssp             CCEECCCTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEE
T ss_pred             ceeeccCccCCccccceeeeccCCceEEEEe-cceEEEEecCCCceEEEecccCcceeeccccchhhhhhhccccceEEE
Confidence            5444433334455666788999999998876 4678888887766555443221  1                 246779


Q ss_pred             cCCCcEEEEEECC-C---------------------------------eEEEEeCCCCceEEEEec-----CCCccEEEE
Q psy17610        303 HPSEVQLITCSTN-K---------------------------------MIDYWETCDGSIIRSLEG-----SDVAAVNCV  343 (515)
Q Consensus       303 ~~~~~~l~~~~~~-~---------------------------------~i~~~d~~~~~~~~~~~~-----~~~~~i~~~  343 (515)
                      +|||++|+....| .                                 .+.++|+.++........     .....+..+
T Consensus       181 SPDgk~iaf~~~D~s~V~~~~~~~~~~~~~p~~~~~~Yp~~G~~np~~~l~v~d~~~~~~~~~~~~~~~~~~~~~y~~~~  260 (465)
T d1xfda1         181 SPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMV  260 (465)
T ss_dssp             CTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEE
T ss_pred             CCCCCeEEEEEecccccceeecccccccccceeeeeeccccCCCCCceeEEEEecCCCcEEEEEeccCcCccccceeeee
Confidence            9999999876422 1                                 234455544332221111     011246778


Q ss_pred             EEcCCCCEEEEEcC-C---CeEEEEEccCCeeeeeccCCC-CC----eeEEEECCCCcEE
Q psy17610        344 DFVDDGKYFLTGGA-D---QIVKMWMYREGVPCFVGIGHA-AS----ITKIKISPDKKVI  394 (515)
Q Consensus       344 ~~~~~~~~l~~~~~-d---g~i~i~d~~~~~~~~~~~~~~-~~----i~~~~~~~~~~~l  394 (515)
                      .|+|++++++.... +   ..+.++|..+++.......+. ..    -....|+|||+.+
T Consensus       261 ~W~~d~~~~~~~~nR~q~~~~i~~~d~~tg~~~~~~~e~~~~wv~~~~~~p~~~~dg~~~  320 (465)
T d1xfda1         261 KWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKF  320 (465)
T ss_dssp             EESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSE
T ss_pred             EEcCCCeEEEEEEccccccceEEEEcCCCCcEEEEEEEcCCceEeccCCceeEccCCCee
Confidence            99999987665432 2   258888998887655443222 11    2346789998754

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.20  E-value=7.4e-08  Score=83.83  Aligned_cols=232  Identities=13%  Similarity=0.134  Sum_probs=152.2

Q ss_pred             cCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecC----CcEEEEeCC
Q psy17610         79 KDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSK----NDIRIWSVR  154 (515)
Q Consensus        79 ~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d----~~i~iw~~~  154 (515)
                      .....+..++|+++|++.++-..+++|+.|+.+++.... ...........+++++||+.+++...+    +.+...+..
T Consensus        37 ~~~~~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~~~~-~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~  115 (319)
T d2dg1a1          37 KKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKR-PFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATEN  115 (319)
T ss_dssp             SSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEE-EEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTT
T ss_pred             cCCcCcEeCEECCCCCEEEEECCCCEEEEEECCCCeEEE-EEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCC
Confidence            344566789999999977777778999999988754333 333355668899999999776665432    334555554


Q ss_pred             CCceeEEEEe--cCeEEEEEEEeeCCCEEEEEeC------CCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEE-
Q psy17610        155 TLNELLRISV--MNMICACIVFTYDGKAILSGWN------DGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLL-  225 (515)
Q Consensus       155 ~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~------dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-  225 (515)
                      .+........  .......+++.++|++.++...      .+.+..++.+.+......  ..-...+.++|+|+++.|. 
T Consensus       116 ~~~~~~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~~~~~~--~~~~~pnGia~s~dg~~lyv  193 (319)
T d2dg1a1         116 GDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPII--QNISVANGIALSTDEKVLWV  193 (319)
T ss_dssp             SCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEE--EEESSEEEEEECTTSSEEEE
T ss_pred             CceeeeeccCCCcccCCcceeEEeccceeecccccccccCcceeEEEecccceeEEEe--eccceeeeeeeccccceEEE
Confidence            4443333221  1234678899999986655322      234666665544333222  2233467899999998664 


Q ss_pred             EecCCCcEEEEEccCCceee--E----EeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCc----
Q psy17610        226 SGGGEGQVRIWKLTRESQSL--Q----CVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPS----  295 (515)
Q Consensus       226 ~~~~d~~i~iw~~~~~~~~~--~----~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~----  295 (515)
                      +-+..+.|..|+++......  .    ............+++.++|++.++....+.|.++|. .++.+..+..+.    
T Consensus       194 ad~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p-~G~~l~~i~~P~~~~~  272 (319)
T d2dg1a1         194 TETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEG  272 (319)
T ss_dssp             EEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGT
T ss_pred             ecccCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECC-CCcEEEEEeCCCcCCC
Confidence            44667899999986432111  1    011111223567999999998888888999999995 688888887664    


Q ss_pred             ---cEEEEEEcCCCcEEEEEEC
Q psy17610        296 ---MIMSAAYHPSEVQLITCST  314 (515)
Q Consensus       296 ---~~~~~~~~~~~~~l~~~~~  314 (515)
                         .+.++++.+....+++...
T Consensus       273 ~~~~~~~~~~~~~~~~~~~t~~  294 (319)
T d2dg1a1         273 HMLRSTHPQFIPGTNQLIICSN  294 (319)
T ss_dssp             CSCBCCEEEECTTSCEEEEEEE
T ss_pred             cCceeeeEEEeCCCCEEEEEcC
Confidence               3678999988877766543

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.01  E-value=2.1e-06  Score=73.38  Aligned_cols=226  Identities=14%  Similarity=0.054  Sum_probs=150.8

Q ss_pred             EEEEecCCCEEEEEe-CCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecC-
Q psy17610        258 VIQIKSDSKEAMSAS-TDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGS-  335 (515)
Q Consensus       258 ~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~-  335 (515)
                      ...|++....|+... ..+.|..||..+++. ..+..+..+.++++.+++.++++ +. ..+..+|..+++........ 
T Consensus        22 gp~wd~~~~~l~wvDi~~~~I~r~d~~~g~~-~~~~~~~~~~~i~~~~dg~l~va-~~-~gl~~~d~~tg~~~~l~~~~~   98 (295)
T d2ghsa1          22 GPTFDPASGTAWWFNILERELHELHLASGRK-TVHALPFMGSALAKISDSKQLIA-SD-DGLFLRDTATGVLTLHAELES   98 (295)
T ss_dssp             EEEEETTTTEEEEEEGGGTEEEEEETTTTEE-EEEECSSCEEEEEEEETTEEEEE-ET-TEEEEEETTTCCEEEEECSST
T ss_pred             CCeEECCCCEEEEEECCCCEEEEEECCCCeE-EEEECCCCcEEEEEecCCCEEEE-Ee-CccEEeecccceeeEEeeeec
Confidence            456776555454443 567899999888765 45667788899999999877765 44 45889999988765443321 


Q ss_pred             --CCccEEEEEEcCCCCEEEEEcC----CCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEE-eCCCcEEEEeC
Q psy17610        336 --DVAAVNCVDFVDDGKYFLTGGA----DQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSV-SADGGIFLWTF  408 (515)
Q Consensus       336 --~~~~i~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~iw~~  408 (515)
                        ....++.+.+.|+|++.++...    .+.-.+|.+..++....... -...+.++|+++++.+..+ +..+.|..+++
T Consensus        99 ~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~~-~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~  177 (295)
T d2ghsa1          99 DLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFAD-ISIPNSICFSPDGTTGYFVDTKVNRLMRVPL  177 (295)
T ss_dssp             TCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEEE-ESSEEEEEECTTSCEEEEEETTTCEEEEEEB
T ss_pred             CCCcccceeeEECCCCCEEEEeccccccccceeEeeecCCcEEEEeec-cCCcceeeecCCCceEEEeecccceeeEeee
Confidence              2246788999999997766432    23456677767755444432 3346789999999866555 45778888887


Q ss_pred             CCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecCCCeeeeeecccccceEE
Q psy17610        409 PELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVN  488 (515)
Q Consensus       409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~  488 (515)
                      ..............            ............+++..+|++.++.-..+.|..|| .+|+.+..+.-.. ..++
T Consensus       178 d~~~~~~~~~~~~~------------~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~d-p~G~~~~~i~lP~-~~~T  243 (295)
T d2ghsa1         178 DARTGLPTGKAEVF------------IDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYD-TDGNHIARYEVPG-KQTT  243 (295)
T ss_dssp             CTTTCCBSSCCEEE------------EECTTSSSEEEEEEECTTSCEEEEEETTTEEEEEC-TTCCEEEEEECSC-SBEE
T ss_pred             cccccccccceEEE------------eccCcccccccceEEcCCCCEEeeeeCCCceEEec-CCCcEeeEecCCC-CceE
Confidence            54322111111000            00112234477889999999888777788999999 5788888887765 6789


Q ss_pred             EEEEc-CCCcEEEE
Q psy17610        489 CVDFV-DDGKYFLT  501 (515)
Q Consensus       489 ~~~~s-~~~~~l~s  501 (515)
                      +++|- ||.+.|..
T Consensus       244 ~~~FGG~d~~~Lyv  257 (295)
T d2ghsa1         244 CPAFIGPDASRLLV  257 (295)
T ss_dssp             EEEEESTTSCEEEE
T ss_pred             EEEEeCCCCCEEEE
Confidence            99995 67665543

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.98  E-value=3.1e-06  Score=72.29  Aligned_cols=222  Identities=10%  Similarity=0.000  Sum_probs=148.7

Q ss_pred             EEEEeeCCCEEEEE-eCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEee
Q psy17610        171 CIVFTYDGKAILSG-WNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVL  249 (515)
Q Consensus       171 ~~~~~~~~~~l~~~-~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~  249 (515)
                      ...|.+....|.-. -..+.|..||.++++....   .....+.++++.++|.++++ +.+ .+..+|..+.+.......
T Consensus        22 gp~wd~~~~~l~wvDi~~~~I~r~d~~~g~~~~~---~~~~~~~~i~~~~dg~l~va-~~~-gl~~~d~~tg~~~~l~~~   96 (295)
T d2ghsa1          22 GPTFDPASGTAWWFNILERELHELHLASGRKTVH---ALPFMGSALAKISDSKQLIA-SDD-GLFLRDTATGVLTLHAEL   96 (295)
T ss_dssp             EEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEE---ECSSCEEEEEEEETTEEEEE-ETT-EEEEEETTTCCEEEEECS
T ss_pred             CCeEECCCCEEEEEECCCCEEEEEECCCCeEEEE---ECCCCcEEEEEecCCCEEEE-EeC-ccEEeecccceeeEEeee
Confidence            34577655545443 3678899999998876432   23456889999988876664 444 588899865544433322


Q ss_pred             ccc--cCceEEEEEecCCCEEEEEeC----CCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEE-CCCeEEEEe
Q psy17610        250 KEH--TSSVSVIQIKSDSKEAMSAST----DGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCS-TNKMIDYWE  322 (515)
Q Consensus       250 ~~~--~~~v~~~~~~~~~~~l~~~~~----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~i~~~d  322 (515)
                      ...  ...+..+.+.|+|++.++...    .+.-.+|.+..++.......-.....++++++++.++.+. ..+.|..|+
T Consensus        97 ~~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~~~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~  176 (295)
T d2ghsa1          97 ESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVP  176 (295)
T ss_dssp             STTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEE
T ss_pred             ecCCCcccceeeEECCCCCEEEEeccccccccceeEeeecCCcEEEEeeccCCcceeeecCCCceEEEeecccceeeEee
Confidence            221  235788899999987666543    2345677777776665555555678899999998776554 577888887


Q ss_pred             CCCC------ceEEEEe-cCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCeeEEEEC-CCCcEE
Q psy17610        323 TCDG------SIIRSLE-GSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASITKIKIS-PDKKVI  394 (515)
Q Consensus       323 ~~~~------~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l  394 (515)
                      +...      +...... .........+++..+|++.++.-..+.|..||. .++.+..+.-....+++++|- ||.+.|
T Consensus       177 ~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp-~G~~~~~i~lP~~~~T~~~FGG~d~~~L  255 (295)
T d2ghsa1         177 LDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRL  255 (295)
T ss_dssp             BCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEE
T ss_pred             ecccccccccceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEecC-CCcEeeEecCCCCceEEEEEeCCCCCEE
Confidence            6421      1111111 122356788999999998888777889999995 677887776666679999995 576655


Q ss_pred             EEEe
Q psy17610        395 VSVS  398 (515)
Q Consensus       395 ~~~~  398 (515)
                      +..+
T Consensus       256 yvTt  259 (295)
T d2ghsa1         256 LVTS  259 (295)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            5443

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.81  E-value=5.7e-07  Score=76.66  Aligned_cols=231  Identities=11%  Similarity=0.068  Sum_probs=127.2

Q ss_pred             ccCCC--CceEEEecCCCCeEEEEcCCCCCCcccccccceEEeeccccccccccccccccccCcceeeeccceEEEEEec
Q psy17610          2 KTTPN--DEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMGCYGKLIKKKVSTKLKDVNAEDVSLYSAGVTALYLLK   79 (515)
Q Consensus         2 ~~~~~--~~~~~~g~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (515)
                      .++||  |+.++.. .+|+|++.|+.+.+                                             ...+..
T Consensus         5 ~~sPdi~G~~v~f~-~~~dl~~~d~~~g~---------------------------------------------~~~Lt~   38 (281)
T d1k32a2           5 LLNPDIHGDRIIFV-CCDDLWEHDLKSGS---------------------------------------------TRKIVS   38 (281)
T ss_dssp             CEEEEEETTEEEEE-ETTEEEEEETTTCC---------------------------------------------EEEEEC
T ss_pred             ccCCCCCCCEEEEE-eCCcEEEEECCCCC---------------------------------------------EEEEec
Confidence            46788  8876653 56789998987641                                             223344


Q ss_pred             CCCcEEEEEEecCCCEEEEEec-C-----ceEEEEECCCCceeEEeec-----cCccCeEEEEeCCCCcEEEEEecC---
Q psy17610         80 DDSGISSLQYNPVNNKVFVGTV-N-----CEIFLIDMNSGFTLTLVNT-----CHTSAIYDLQFPVNFSSVFATCSK---  145 (515)
Q Consensus        80 ~~~~v~~~~~s~~~~~l~~~~~-d-----~~i~iw~~~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~l~~~~~d---  145 (515)
                      +.+.+...+|||||++||.... +     ..|.+++..++........     ..........|+|+|+.++.....   
T Consensus        39 ~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~lt~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~  118 (281)
T d1k32a2          39 NLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPF  118 (281)
T ss_dssp             SSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSS
T ss_pred             CCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceEEeeecCCCccCccccccccccCCCCCEEEEEEccCCC
Confidence            6678889999999999987643 2     3588889888654433221     122356778999999988876542   


Q ss_pred             ---CcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeC-CC-----------eEEEEecCCCceEEEecCCCCC
Q psy17610        146 ---NDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWN-DG-----------FIRCFTPQSGKLKFIIPNAHNR  210 (515)
Q Consensus       146 ---~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg-----------~i~~~~~~~~~~~~~~~~~~~~  210 (515)
                         ..+...+...+.....   ...... -.+.+++..++.... ..           ................  ....
T Consensus       119 ~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~  192 (281)
T d1k32a2         119 SSMTCLYRVENDGINFVPL---NLGPAT-HILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIV--DMST  192 (281)
T ss_dssp             TTCCEEEEEEGGGTEEEEC---CSCSCS-EEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEE--CCSS
T ss_pred             ccceeeeeecCCCceeEEe---cCCccc-eeeecCCCeEEEeeccccceeeeeccCCcceeeeeccccceeecc--CCcc
Confidence               2244555544332221   111112 234455544443221 11           1122222222222222  2333


Q ss_pred             CeEEEEEcCCCCEEEEecCC--CcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEE
Q psy17610        211 GVTALAITQDGTRLLSGGGE--GQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRL  288 (515)
Q Consensus       211 ~v~~~~~~~~~~~l~~~~~d--~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~  288 (515)
                      ......+.++. .+.....+  ..|.++|++......+  ......  ....|+|||+.|+... ++.|.++|+.+++..
T Consensus       193 ~~~~~~~~~~~-~~~~~~~~~~~~l~~~d~~g~~~~~l--t~~~~~--~~~~~SpDG~~I~f~~-~~~l~~~d~~~g~~~  266 (281)
T d1k32a2         193 HVSSPVIVGHR-IYFITDIDGFGQIYSTDLDGKDLRKH--TSFTDY--YPRHLNTDGRRILFSK-GGSIYIFNPDTEKIE  266 (281)
T ss_dssp             CCEEEEEETTE-EEEEECTTSSCEEEEEETTSCSCEEC--CCCCSS--CEEEEEESSSCEEEEE-TTEEEEECTTTCCEE
T ss_pred             ccceeeeeccc-cceecccccccceEEEeCCCCceEEe--ecCCCc--ccccCcCCCCEEEEEe-CCEEEEEECCCCCEE
Confidence            44455555543 23333333  3566667654333222  222222  2346899999987644 678999999887755


Q ss_pred             EE
Q psy17610        289 II  290 (515)
Q Consensus       289 ~~  290 (515)
                      ..
T Consensus       267 ~i  268 (281)
T d1k32a2         267 KI  268 (281)
T ss_dssp             EC
T ss_pred             Ee
Confidence            43

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.77  E-value=2.9e-05  Score=64.51  Aligned_cols=250  Identities=7%  Similarity=-0.054  Sum_probs=154.2

Q ss_pred             CEEEEEecCceEEEEECCCCce----eEEeeccCccCeEEEEeCCCCcEEEEEec-CCcEEEEeCCCCceeEEEEecCeE
Q psy17610         94 NKVFVGTVNCEIFLIDMNSGFT----LTLVNTCHTSAIYDLQFPVNFSSVFATCS-KNDIRIWSVRTLNELLRISVMNMI  168 (515)
Q Consensus        94 ~~l~~~~~d~~i~iw~~~~~~~----~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~~~~  168 (515)
                      .+|+.+.. +.|+-.+++....    ....+..+...+..++|.+..+.++-+.. ++.|...+++.......+......
T Consensus         2 ~fLl~s~~-~~I~~~~ld~~~~~~~~~~~~~~~~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~~v~~~~~~~   80 (263)
T d1npea_           2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGS   80 (263)
T ss_dssp             EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCC
T ss_pred             CEEEEeCC-CeEEEEECCCccccccccccccccCCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcEEEEEecccc
Confidence            34555443 4787777764211    12223334556888999988778877755 677888888765544444333356


Q ss_pred             EEEEEEeeCCCEEEEE-eCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecC-CCcEEEEEccCCceeeE
Q psy17610        169 CACIVFTYDGKAILSG-WNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGG-EGQVRIWKLTRESQSLQ  246 (515)
Q Consensus       169 v~~~~~~~~~~~l~~~-~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~~~~  246 (515)
                      +..+++..-+..|..+ ...+.|.+.++......... ......+..++++|...++..... .+.-+|+..........
T Consensus        81 p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~~~~l~-~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~~  159 (263)
T d1npea_          81 PEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLF-DTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRR  159 (263)
T ss_dssp             EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-CSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCE
T ss_pred             ccEEEEeccCCeEEEeccCCCEEEEEecCCceEEEEe-cccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCce
Confidence            7889998767666654 45678999998866544333 334467899999997766664432 23334543322222222


Q ss_pred             EeeccccCceEEEEEecCCCEEEEEe-CCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEE-ECCCeEEEEeCC
Q psy17610        247 CVLKEHTSSVSVIQIKSDSKEAMSAS-TDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITC-STNKMIDYWETC  324 (515)
Q Consensus       247 ~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~i~~~d~~  324 (515)
                      ......-.....+++++.++.|+.+. ..+.|...++................++++.  +..++.. ...+.|...|..
T Consensus       160 ~i~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~g~~~~~v~~~~~~P~~lav~--~~~lYwtd~~~~~I~~~~~~  237 (263)
T d1npea_         160 ILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSY--GKNLYYTDWKTNSVIAMDLA  237 (263)
T ss_dssp             EEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEEE--TTEEEEEETTTTEEEEEETT
T ss_pred             eeeeecccccceEEEeecCcEEEEEeCCCCEEEEEECCCCCeEEEECCCCCcEEEEEE--CCEEEEEECCCCEEEEEECC
Confidence            22222334567899998888776654 5678999998766555445444445677775  4445444 467889999998


Q ss_pred             CCceEEEEecCCCccEEEEEEcC
Q psy17610        325 DGSIIRSLEGSDVAAVNCVDFVD  347 (515)
Q Consensus       325 ~~~~~~~~~~~~~~~i~~~~~~~  347 (515)
                      +++.+..+..........+++.+
T Consensus       238 ~g~~~~~~~~~~~~~~~gi~v~~  260 (263)
T d1npea_         238 ISKEMDTFHPHKQTRLYGITIAL  260 (263)
T ss_dssp             TTEEEEEECCSSCCCCCCEEEEC
T ss_pred             CCccceEECCCCCCCcceEEEeC
Confidence            88877766544434444555443

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.75  E-value=4.1e-05  Score=66.10  Aligned_cols=217  Identities=8%  Similarity=0.050  Sum_probs=141.6

Q ss_pred             CCcEEEEEec-CCcEEEEeCCCCceeEEEEec-CeEEEEEEEe--eCCCEEEEEeCCC------------------eEEE
Q psy17610        135 NFSSVFATCS-KNDIRIWSVRTLNELLRISVM-NMICACIVFT--YDGKAILSGWNDG------------------FIRC  192 (515)
Q Consensus       135 ~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~-~~~v~~~~~~--~~~~~l~~~~~dg------------------~i~~  192 (515)
                      ||+++++... +.+|.+-|+++.+..+.+... ...+..+...  |+..+++..+.+.                  .+.+
T Consensus        98 DGrylFVNDkan~RVAvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y~~~~t~  177 (459)
T d1fwxa2          98 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA  177 (459)
T ss_dssp             EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-EEEEEEE
T ss_pred             ceeEEEEEcCCCceEEEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCccccchhhcceEEEE
Confidence            7899999886 888999999999887655533 2345555554  4556777766532                  3678


Q ss_pred             EecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCCC---------------cEEEEEcc------------------
Q psy17610        193 FTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGEG---------------QVRIWKLT------------------  239 (515)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---------------~i~iw~~~------------------  239 (515)
                      +|.++.+....+..  ......+.++++|+++++.+.+.               .+.+++..                  
T Consensus       178 ID~~tm~V~~QV~V--~g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~Gk~~eingV~  255 (459)
T d1fwxa2         178 VDADKWEVAWQVLV--SGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVK  255 (459)
T ss_dssp             EETTTTEEEEEEEE--SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEE
T ss_pred             EecCCceEEEEeee--CCChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhcCCcEEeCCce
Confidence            89999888777643  34566889999999998876431               23444431                  


Q ss_pred             -----CC-ceeeEEeeccccCceEEEEEecCCCEEEEEeC-CCcEEEEEcccce------------EEEEEEcCccEEEE
Q psy17610        240 -----RE-SQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST-DGTCVLWDLIKST------------RLIIMILPSMIMSA  300 (515)
Q Consensus       240 -----~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~------------~~~~~~~~~~~~~~  300 (515)
                           .. .......++. ......+.++|||+++++++. +.++.++|++...            ........-.....
T Consensus       256 VVD~~~~~~~~v~~yIPV-pKsPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~~~~~~~~~e~elglgPLht  334 (459)
T d1fwxa2         256 VVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHT  334 (459)
T ss_dssp             EEECSGG--CSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-GGGGEEECCBCCSCEEEE
T ss_pred             eecccccCCcceeEEEec-CCCCCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhcccCCccccEEeecccCcCcccc
Confidence                 10 0111111221 223467889999999887765 7899999986421            22222333456778


Q ss_pred             EEcCCCcEEEEEECCCeEEEEeCCCC----------ceEEEEecCCCccEEEE------EEcCCCCEEEEEc
Q psy17610        301 AYHPSEVQLITCSTNKMIDYWETCDG----------SIIRSLEGSDVAAVNCV------DFVDDGKYFLTGG  356 (515)
Q Consensus       301 ~~~~~~~~l~~~~~~~~i~~~d~~~~----------~~~~~~~~~~~~~i~~~------~~~~~~~~l~~~~  356 (515)
                      +|...|....+-.-|..|.-|++...          ..+..+..+-  .+-.+      ...|+|++|++..
T Consensus       335 ~fd~~g~aytslfids~v~kw~~~~~~~~~~~~~~~~v~~k~~v~y--~~gh~~~~~g~t~~~dgk~l~~~n  404 (459)
T d1fwxa2         335 AFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHY--QPGHLKTVMGETLDATNDWLVCLS  404 (459)
T ss_dssp             EECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSS--CEEEEEETTTTSTTCCSSEEEEEE
T ss_pred             ccCCCceEEEEeeccceEEEEecchhhhhhccccCCcceecccccc--CCCCCccCcCCcCCCCCCEEEEec
Confidence            89888876666677999999997432          4555665542  22223      2367899998875

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.75  E-value=1.8e-06  Score=73.48  Aligned_cols=228  Identities=9%  Similarity=-0.008  Sum_probs=123.4

Q ss_pred             EEeeC--CCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecC----CC--cEEEEEccCCcee
Q psy17610        173 VFTYD--GKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGG----EG--QVRIWKLTRESQS  244 (515)
Q Consensus       173 ~~~~~--~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~--~i~iw~~~~~~~~  244 (515)
                      ..+|+  |+.++..+ ++.|.+.|+.+++....  ..+...+...+|+|||+.|+....    +.  .|.+++.......
T Consensus         5 ~~sPdi~G~~v~f~~-~~dl~~~d~~~g~~~~L--t~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~   81 (281)
T d1k32a2           5 LLNPDIHGDRIIFVC-CDDLWEHDLKSGSTRKI--VSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIK   81 (281)
T ss_dssp             CEEEEEETTEEEEEE-TTEEEEEETTTCCEEEE--ECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEE
T ss_pred             ccCCCCCCCEEEEEe-CCcEEEEECCCCCEEEE--ecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceE
Confidence            46788  99888764 56799999999887654  356677889999999999986532    22  3556665433322


Q ss_pred             eEEeec----cccCceEEEEEecCCCEEEEEeCC------CcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEE-EE
Q psy17610        245 LQCVLK----EHTSSVSVIQIKSDSKEAMSASTD------GTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLIT-CS  313 (515)
Q Consensus       245 ~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~  313 (515)
                      .+....    ..........|+|+++.++.....      ..+...+..........  ...... .+.+++..++. ..
T Consensus        82 ~lt~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~  158 (281)
T d1k32a2          82 RITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLN--LGPATH-ILFADGRRVIGRNT  158 (281)
T ss_dssp             ECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECC--SCSCSE-EEEETTEEEEEESC
T ss_pred             EeeecCCCccCccccccccccCCCCCEEEEEEccCCCccceeeeeecCCCceeEEec--CCccce-eeecCCCeEEEeec
Confidence            221111    122345678899999998876442      23455555544433221  112222 23333333332 22


Q ss_pred             CCC-----------eEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcC--CCeEEEEEccCCeeeeeccCCCC
Q psy17610        314 TNK-----------MIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGA--DQIVKMWMYREGVPCFVGIGHAA  380 (515)
Q Consensus       314 ~~~-----------~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~  380 (515)
                      ...           ...................  .......++++. .+.....  ...|.++|+.+++... +..+. 
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~l~~~d~~g~~~~~-lt~~~-  233 (281)
T d1k32a2         159 FELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMS--THVSSPVIVGHR-IYFITDIDGFGQIYSTDLDGKDLRK-HTSFT-  233 (281)
T ss_dssp             SCCTTSTTCCSTTCCEEEEEEETTEEEEEECCS--SCCEEEEEETTE-EEEEECTTSSCEEEEEETTSCSCEE-CCCCC-
T ss_pred             cccceeeeeccCCcceeeeeccccceeeccCCc--cccceeeeeccc-cceecccccccceEEEeCCCCceEE-eecCC-
Confidence            111           1111111122222222221  333344555543 2333333  3367788887665433 32222 


Q ss_pred             CeeEEEECCCCcEEEEEeCCCcEEEEeCCCCc
Q psy17610        381 SITKIKISPDKKVIVSVSADGGIFLWTFPELE  412 (515)
Q Consensus       381 ~i~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~  412 (515)
                      ......|+|||+.|+.. .++.|.++|+...+
T Consensus       234 ~~~~~~~SpDG~~I~f~-~~~~l~~~d~~~g~  264 (281)
T d1k32a2         234 DYYPRHLNTDGRRILFS-KGGSIYIFNPDTEK  264 (281)
T ss_dssp             SSCEEEEEESSSCEEEE-ETTEEEEECTTTCC
T ss_pred             CcccccCcCCCCEEEEE-eCCEEEEEECCCCC
Confidence            22334689999988764 56889999987765

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=98.74  E-value=1.4e-05  Score=74.87  Aligned_cols=258  Identities=11%  Similarity=0.069  Sum_probs=154.7

Q ss_pred             CCEEEEEecCceEEEEECCCCceeEEeeccC--c-cCeEEEEeCCCCcEEEEEec------CCcEEEEeCCCCceeEEEE
Q psy17610         93 NNKVFVGTVNCEIFLIDMNSGFTLTLVNTCH--T-SAIYDLQFPVNFSSVFATCS------KNDIRIWSVRTLNELLRIS  163 (515)
Q Consensus        93 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h--~-~~v~~~~~~~~~~~l~~~~~------d~~i~iw~~~~~~~~~~~~  163 (515)
                      +..++.++.||.+.-.|.++|+.........  . ..++.--.-.++ .++.+..      ++.|+-+|+.+|+.+.++.
T Consensus       115 ~~~i~~~~~~g~l~alda~tG~~~w~~~~~~~~~~~~~t~~p~v~~~-~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~  193 (571)
T d2ad6a1         115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKD-TVLMGCSGAELGVRGAVNAFDLKTGELKWRAF  193 (571)
T ss_dssp             TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETT-EEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred             CCeEEEEeCCCcEEeeehhhhhhhccccccccccccceeecCeEeCC-eEEEeeccccccccCcEEEEECCCCcEEEEEe
Confidence            4467788889999999999987655432211  1 111111011133 4455443      6789999999999998876


Q ss_pred             ecC-------------------------------------eEE-EEEEEeeCCCEEEEEeC----------------CCe
Q psy17610        164 VMN-------------------------------------MIC-ACIVFTYDGKAILSGWN----------------DGF  189 (515)
Q Consensus       164 ~~~-------------------------------------~~v-~~~~~~~~~~~l~~~~~----------------dg~  189 (515)
                      ...                                     ..+ ...++.++...+..+..                ...
T Consensus       194 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gg~vW~~~s~D~~~g~~y~~tg~~~p~~~~~r~g~n~~s~s  273 (571)
T d2ad6a1         194 ATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMT  273 (571)
T ss_dssp             SSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTE
T ss_pred             ccCCcccccccccccccccccCcccccccccCCcccccCCCccccccccchhcCeeeeecccccCccccccccccccccc
Confidence            321                                     111 23456666666665543                346


Q ss_pred             EEEEecCCCceEEEecCCCC--------CCeEEEEEcCCCC---EEEEecCCCcEEEEEccCCceeeEEee---------
Q psy17610        190 IRCFTPQSGKLKFIIPNAHN--------RGVTALAITQDGT---RLLSGGGEGQVRIWKLTRESQSLQCVL---------  249 (515)
Q Consensus       190 i~~~~~~~~~~~~~~~~~~~--------~~v~~~~~~~~~~---~l~~~~~d~~i~iw~~~~~~~~~~~~~---------  249 (515)
                      +...|.++|+.+..+...|.        ..........+++   .++.++.+|.+.++|..+.+.......         
T Consensus       274 vvAld~~TG~~~W~~q~~~~D~Wd~D~~~~~~l~~~~~~g~~~~~v~~~~k~G~l~vlDr~tG~~i~~~~~~~~~~~~~~  353 (571)
T d2ad6a1         274 IWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKK  353 (571)
T ss_dssp             EEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEE
T ss_pred             eeeeeccchhheecccccCccccccccccccceeeeeccCccccceeeccccceEEEEecCCCcEeeeeccCCccccccc
Confidence            78889999998877753322        1112222222443   456778889998888754332111000         


Q ss_pred             --------------------------ccccCce--EEEEEecCCCEEEEEeCC---------------------------
Q psy17610        250 --------------------------KEHTSSV--SVIQIKSDSKEAMSASTD---------------------------  274 (515)
Q Consensus       250 --------------------------~~~~~~v--~~~~~~~~~~~l~~~~~d---------------------------  274 (515)
                                                .+..+..  ...+++|+...++....+                           
T Consensus       354 ~~~~~~~~i~~~~~~~~~~~~g~~~~p~~~Gg~~w~~~a~dP~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  433 (571)
T d2ad6a1         354 VDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYP  433 (571)
T ss_dssp             ECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEE
T ss_pred             ccccccccccCcccccccccCceEEEeccccccccccceECCCCceEEEeccccccccccccccccCCccccccceeecc
Confidence                                      0000000  124566666655543221                           


Q ss_pred             ----------CcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEE
Q psy17610        275 ----------GTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVD  344 (515)
Q Consensus       275 ----------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~  344 (515)
                                |.+..+|+.+++.+-......+..+-.+.-.+..+++++.|+.++.+|.++|+.+.++.......-.-+.
T Consensus       434 ~~~~~~~~~~G~l~AiD~~TG~~~W~~~~~~~~~~g~l~TagglVf~G~~dg~l~A~Da~tGe~lW~~~l~~~~~a~P~t  513 (571)
T d2ad6a1         434 GPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMT  513 (571)
T ss_dssp             CTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEE
T ss_pred             ccCCcccCCcccEEEeccCCCceeeEcCCCCCCCcceeEecCCEEEEECCCCeEEEEECCCCcEEEEEECCCCceecceE
Confidence                      4677888888888877766654433333445667888999999999999999999999876433333466


Q ss_pred             EcCCCCE
Q psy17610        345 FVDDGKY  351 (515)
Q Consensus       345 ~~~~~~~  351 (515)
                      +..||+.
T Consensus       514 y~~dGkq  520 (571)
T d2ad6a1         514 YSFKGKQ  520 (571)
T ss_dssp             EEETTEE
T ss_pred             EEECCEE
Confidence            6667764

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.70  E-value=5.4e-07  Score=77.85  Aligned_cols=228  Identities=11%  Similarity=0.063  Sum_probs=142.8

Q ss_pred             cCCCEEEEEe-CCCcEEEEEcccceEEEEEEcC--ccEEEEEEc--CCCcEEEEEECC------------------CeEE
Q psy17610        263 SDSKEAMSAS-TDGTCVLWDLIKSTRLIIMILP--SMIMSAAYH--PSEVQLITCSTN------------------KMID  319 (515)
Q Consensus       263 ~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~--~~~~~~~~~--~~~~~l~~~~~~------------------~~i~  319 (515)
                      +||++++... .+.+|.+-|+.+.+..+....+  ..+..+...  |+..+++..+..                  +.+.
T Consensus        97 yDGrylFVNDkan~RVAvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y~~~~t  176 (459)
T d1fwxa2          97 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT  176 (459)
T ss_dssp             EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-EEEEEE
T ss_pred             cceeEEEEEcCCCceEEEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCccccchhhcceEEE
Confidence            4788888776 4788999999999987766655  356766665  455677766653                  2367


Q ss_pred             EEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCC---------------eEEEEEc------------------
Q psy17610        320 YWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQ---------------IVKMWMY------------------  366 (515)
Q Consensus       320 ~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg---------------~i~i~d~------------------  366 (515)
                      .+|..+.+...++...  .....++++++|+++++.+.+.               .+.+++.                  
T Consensus       177 ~ID~~tm~V~~QV~V~--g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~Gk~~eingV  254 (459)
T d1fwxa2         177 AVDADKWEVAWQVLVS--GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGV  254 (459)
T ss_dssp             EEETTTTEEEEEEEES--SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTE
T ss_pred             EEecCCceEEEEeeeC--CChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhcCCcEEeCCc
Confidence            8899998888887765  4566889999999998876431               2334433                  


Q ss_pred             -----cC--CeeeeeccCCCCCeeEEEECCCCcEEEEEeC-CCcEEEEeCCCCcCccCCCcccceeeecccccccceeee
Q psy17610        367 -----RE--GVPCFVGIGHAASITKIKISPDKKVIVSVSA-DGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIM  438 (515)
Q Consensus       367 -----~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  438 (515)
                           +.  +..+..+..-......+.++|||+++++++. +.++.++|++............         ........
T Consensus       255 ~VVD~~~~~~~~v~~yIPVpKsPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~~~---------~~~~~~e~  325 (459)
T d1fwxa2         255 KVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADP---------RSAVVAEP  325 (459)
T ss_dssp             EEEECSGG--CSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-G---------GGGEEECC
T ss_pred             eeecccccCCcceeEEEecCCCCCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhcccCCc---------cccEEeec
Confidence                 21  1011111111233457899999999988765 8899999997654322111100         00011111


Q ss_pred             cCcccEEEeeeccCCcEEEEeecCCeEEEEecCCC----------eeeeeecccccceEEEE------EEcCCCcEEEEe
Q psy17610        439 ILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDG----------SIIRSLEGSDVAAVNCV------DFVDDGKYFLTG  502 (515)
Q Consensus       439 ~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~----------~~~~~~~~~~~~~v~~~------~~s~~~~~l~s~  502 (515)
                      ...-.....+|..+|.-..+---|..|.-|++...          ..+..+.-|  ..+-.+      ...|||++|++.
T Consensus       326 elglgPLht~fd~~g~aytslfids~v~kw~~~~~~~~~~~~~~~~v~~k~~v~--y~~gh~~~~~g~t~~~dgk~l~~~  403 (459)
T d1fwxa2         326 ELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVH--YQPGHLKTVMGETLDATNDWLVCL  403 (459)
T ss_dssp             BCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECS--SCEEEEEETTTTSTTCCSSEEEEE
T ss_pred             ccCcCccccccCCCceEEEEeeccceEEEEecchhhhhhccccCCcceeccccc--cCCCCCccCcCCcCCCCCCEEEEe
Confidence            12233567788888865556668999999998532          344455443  222222      246789988886


Q ss_pred             e
Q psy17610        503 G  503 (515)
Q Consensus       503 ~  503 (515)
                      .
T Consensus       404 n  404 (459)
T d1fwxa2         404 S  404 (459)
T ss_dssp             E
T ss_pred             c
Confidence            4

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=98.69  E-value=2.3e-05  Score=73.17  Aligned_cols=261  Identities=13%  Similarity=0.165  Sum_probs=157.9

Q ss_pred             CCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCC---CCcEEEEEec------CCcEEEEeCCCCceeEEEE
Q psy17610         93 NNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPV---NFSSVFATCS------KNDIRIWSVRTLNELLRIS  163 (515)
Q Consensus        93 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~---~~~~l~~~~~------d~~i~iw~~~~~~~~~~~~  163 (515)
                      +..++.+..++.|.-.|..+|+.+..........-..+.-.|   ++ .++.+..      .|.|.-+|.++|+.+.++.
T Consensus       117 ~~~v~~~~~~g~l~Alda~tG~~~w~~~~~~~~~~~~~~~~p~v~~~-~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~  195 (560)
T d1kv9a2         117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY  195 (560)
T ss_dssp             BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred             CCeEEEEeCCCEEEEEECCCCcEEeccCccCcccceeeeeeeeeecC-cccccccceeccccceEEEEECCCceEEeeee
Confidence            456788888899999999998766554322111111111122   32 4444432      3679999999999998876


Q ss_pred             ecC------------------------------eE-EEEEEEeeCCCEEEEEeC-------------------CCeEEEE
Q psy17610        164 VMN------------------------------MI-CACIVFTYDGKAILSGWN-------------------DGFIRCF  193 (515)
Q Consensus       164 ~~~------------------------------~~-v~~~~~~~~~~~l~~~~~-------------------dg~i~~~  193 (515)
                      .-.                              .. -..+++.+...++..+..                   ...|.-.
T Consensus       196 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~s~D~~~~l~y~~tgn~~~~~~~~~~~~~g~n~~s~sivAl  275 (560)
T d1kv9a2         196 TVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAI  275 (560)
T ss_dssp             SSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEE
T ss_pred             eccccccCCccccccccccccccccccccccCCCCcccccccccccCeeeecCCCCcccccccccccCCccccceeeEEe
Confidence            211                              01 123556666666654331                   2467788


Q ss_pred             ecCCCceEEEecCCCCC--------CeEEEEEcCCC---CEEEEecCCCcEEEEEccCCceeeEEeec------------
Q psy17610        194 TPQSGKLKFIIPNAHNR--------GVTALAITQDG---TRLLSGGGEGQVRIWKLTRESQSLQCVLK------------  250 (515)
Q Consensus       194 ~~~~~~~~~~~~~~~~~--------~v~~~~~~~~~---~~l~~~~~d~~i~iw~~~~~~~~~~~~~~------------  250 (515)
                      |+++++....+...|..        ...-+....++   ..++.+..+|.+.++|..+.+........            
T Consensus       276 d~~tG~~~W~~Q~~~~D~wd~d~~~~~~l~~~~~~g~~~~~v~~~~k~G~~~~lDr~tG~~i~~~~~~~~~~~~~~d~~~  355 (560)
T d1kv9a2         276 RPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLAT  355 (560)
T ss_dssp             CTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTT
T ss_pred             cCCccceeEEEeccccccccccccceeeeeeeecCCceeeeeeecCccceEEEEecCCCcccccccccccccccccChhh
Confidence            99999987766432221        11122222233   35667888999999997544322111100            


Q ss_pred             --------------------cccC--ceEEEEEecCCCEEEEEeC-----------------------------------
Q psy17610        251 --------------------EHTS--SVSVIQIKSDSKEAMSAST-----------------------------------  273 (515)
Q Consensus       251 --------------------~~~~--~v~~~~~~~~~~~l~~~~~-----------------------------------  273 (515)
                                          +-.+  .-...+++|+...++....                                   
T Consensus       356 ~~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yvp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  435 (560)
T d1kv9a2         356 GRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAV  435 (560)
T ss_dssp             CCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGG
T ss_pred             ccccccccccccccceeeeeccccccccccccccCCCCeeecccccccceeeccccccccccccccccCcccccCCCCcc
Confidence                                0000  0013456666666554331                                   


Q ss_pred             -CCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCC-E
Q psy17610        274 -DGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGK-Y  351 (515)
Q Consensus       274 -d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~  351 (515)
                       .|.+.-+|+.+++.+-....+.+..+-.+.-.+.++++++.||.++.+|..+|+.+.++.......-.-+.+..+|+ |
T Consensus       436 ~~G~l~A~D~~tGk~~W~~~~~~~~~gg~l~TagglVF~G~~dg~l~A~Da~tGe~LW~~~l~~~~~~~P~ty~~dGkqy  515 (560)
T d1kv9a2         436 VSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQY  515 (560)
T ss_dssp             CEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred             cccceEEEeCCCCeEeeeccCCCCCCCceeEECCCEEEEECCCCcEEEEECCCCcEeEEEECCCCccccCEEEEECCEEE
Confidence             25688899999999988877766554444556778888999999999999999999999876433223355666775 4


Q ss_pred             EEE
Q psy17610        352 FLT  354 (515)
Q Consensus       352 l~~  354 (515)
                      +++
T Consensus       516 v~v  518 (560)
T d1kv9a2         516 VAI  518 (560)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            443

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.65  E-value=6.1e-05  Score=61.40  Aligned_cols=263  Identities=10%  Similarity=0.068  Sum_probs=170.3

Q ss_pred             CCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcE
Q psy17610        229 GEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQ  308 (515)
Q Consensus       229 ~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (515)
                      ...++.+.|+........+...     -.+.-.+|..+.++.-+ ..++.++|+++.+.++....+.++.--.|-.+...
T Consensus        43 ~~~~VvIidl~n~~~~~Rrpi~-----AdsAIMhP~~~IiALra-g~~LQiFnletK~klks~~~~e~VvfWkWis~~~L  116 (327)
T d1utca2          43 EQAQVVIIDMNDPSNPIRRPIS-----ADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTV  116 (327)
T ss_dssp             TEEEEEEEETTSTTSCEEEECC-----CSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEESSSSEE
T ss_pred             CCceEEEEECCCCCcceecccc-----hhhhhcCCCCcEEEEec-CCeEEEEehhHhhhhceEEcCCCcEEEEecCCCEE
Confidence            3457888888654433333322     22344578877777665 56899999999999999999999888888766554


Q ss_pred             EEEEECCCeEEEEeCCCC-ceEEEEecCCC---ccEEEEEEcCCCCEEEEEc---C----CCeEEEEEccCCeeeeeccC
Q psy17610        309 LITCSTNKMIDYWETCDG-SIIRSLEGSDV---AAVNCVDFVDDGKYFLTGG---A----DQIVKMWMYREGVPCFVGIG  377 (515)
Q Consensus       309 l~~~~~~~~i~~~d~~~~-~~~~~~~~~~~---~~i~~~~~~~~~~~l~~~~---~----dg~i~i~d~~~~~~~~~~~~  377 (515)
                      -++  .+..++-|++... .+.+.+..+..   ..|-....+++.++++..+   .    .|.+.+|..+.+ .-+.+.+
T Consensus       117 ~lV--T~taVYHW~~~g~s~P~k~fdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~-~sQ~ieG  193 (327)
T d1utca2         117 ALV--TDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEG  193 (327)
T ss_dssp             EEE--CSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECC
T ss_pred             EEE--cCCceEEEcccCCCCchhhhhhcccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccC-cCccccc
Confidence            443  3557999998543 45666665432   5677778889999887543   2    367889988654 4455667


Q ss_pred             CCCCeeEEEECCCC---cEEEEEe---CCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeecc
Q psy17610        378 HAASITKIKISPDK---KVIVSVS---ADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHP  451 (515)
Q Consensus       378 ~~~~i~~~~~~~~~---~~l~~~~---~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~  451 (515)
                      |.+.-..+.+.-+.   ..++.+.   ..+++++-++.................        ........+...++..|+
T Consensus       194 haa~F~~~~~~g~~~~~~lf~fa~r~~~~~kLhIiEig~~~~g~~~f~kk~vdi--------~fppea~~DFPvamqvs~  265 (327)
T d1utca2         194 HAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDV--------FFPPEAQNDFPVAMQISE  265 (327)
T ss_dssp             SEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSCCCTTCCCCCCEEEEC--------CCCTTCTTCCEEEEEEET
T ss_pred             eeeeeEEEEcCCCCCCceEEEEEECCCCCcEEEEEEcCCCccCCCCCcceeEEE--------ECCccccCCcEEEEEeec
Confidence            76655544443211   2333332   236788988876432111111100000        011112235577899999


Q ss_pred             CCcEEEEeecCCeEEEEecCCCeeeeeecccccceEEEEEEcCCCcEEEEeecCCeEE
Q psy17610        452 SEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVK  509 (515)
Q Consensus       452 ~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~  509 (515)
                      ....+...+.-|.+++||++++.++..-+-.. ..|...+-..+..-++....+|.|.
T Consensus       266 kygiiyviTK~G~i~lyDleTgt~i~~nRIs~-~~iF~~a~~~~~~Gi~~VNr~GqVl  322 (327)
T d1utca2         266 KHDVVFLITKYGYIHLYDLETGTCIYMNRISG-ETIFVTAPHEATAGIIGVNRKGQVL  322 (327)
T ss_dssp             TTTEEEEEETTSEEEEEETTTCCEEEEEECCS-SCEEEEEEETTTTEEEEEETTSEEE
T ss_pred             cCCEEEEEecCcEEEEEEcccccEEEEeecCC-CceEEeccCCCCceEEEECCCCeEE
Confidence            99999999999999999999999987766544 6677666666655667777888764

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.64  E-value=0.00011  Score=68.93  Aligned_cols=261  Identities=11%  Similarity=0.059  Sum_probs=157.8

Q ss_pred             CCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCC--CCcEEEEEec------CCcEEEEeCCCCceeEEEEe
Q psy17610         93 NNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPV--NFSSVFATCS------KNDIRIWSVRTLNELLRISV  164 (515)
Q Consensus        93 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~~~~~------d~~i~iw~~~~~~~~~~~~~  164 (515)
                      +.+++.++.|+.|.-.|.++|+.+.....+....-..+.-+|  .+..++++..      .|.|+-+|+.+|+.+.++..
T Consensus       121 ~~~v~~~t~dg~l~Alda~tG~~~w~~~~~d~~~~~~~t~~P~v~~~~vivg~~~~e~~~~G~v~A~Da~TG~~~W~~~t  200 (596)
T d1w6sa_         121 PALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA  200 (596)
T ss_dssp             CCEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred             ceEEEEEeCCCCeEeeccccCceeccccccccccccccccCCcEECCeEEEeeccccccccCceEEEECCCCcEEEEeec
Confidence            457888899999999999998777665332111111111112  1235555543      48899999999999988763


Q ss_pred             cC-------------------------------------e-EEEEEEEeeCCCEEEEEeC----------------CCeE
Q psy17610        165 MN-------------------------------------M-ICACIVFTYDGKAILSGWN----------------DGFI  190 (515)
Q Consensus       165 ~~-------------------------------------~-~v~~~~~~~~~~~l~~~~~----------------dg~i  190 (515)
                      ..                                     . .-..+++.+....+..+..                ...+
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~tw~g~~~~~gg~~~W~~~s~D~~~~lvy~~tg~~~p~~~~~r~g~n~ys~si  280 (596)
T d1w6sa_         201 TGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTI  280 (596)
T ss_dssp             SSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEE
T ss_pred             cCCccccccccccccccccccccccccccCCCCceecCCCccccccccccCCCeeecccccccccccccccccccccccc
Confidence            21                                     0 1123456666666665533                2457


Q ss_pred             EEEecCCCceEEEecCCCC--------CCeEEEEE-cCCC---CEEEEecCCCcEEEEEccCCceeeEEeecccc-----
Q psy17610        191 RCFTPQSGKLKFIIPNAHN--------RGVTALAI-TQDG---TRLLSGGGEGQVRIWKLTRESQSLQCVLKEHT-----  253 (515)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~--------~~v~~~~~-~~~~---~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~-----  253 (515)
                      .-.|+++|+....+...|.        .....+.. ..+|   +.++....+|.+.++|..+++...........     
T Consensus       281 vAlD~~TG~~~W~~Q~~~~D~Wd~d~~~~~~l~d~~~~~G~~~~~v~~~~k~G~~~vlDr~tG~~i~~~~~~~~~~~~~~  360 (596)
T d1w6sa_         281 FGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKS  360 (596)
T ss_dssp             EEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEE
T ss_pred             cccccccccccccccceeccccCCccccceeeeeccccccccccceeccccccceeeecCCCCceeeecccccccccccc
Confidence            8889999999877643332        11222222 2344   35777888899999997544322111100000     


Q ss_pred             ------C--------------------------ceEEEEEecCCCEEEEEeC----------------------------
Q psy17610        254 ------S--------------------------SVSVIQIKSDSKEAMSAST----------------------------  273 (515)
Q Consensus       254 ------~--------------------------~v~~~~~~~~~~~l~~~~~----------------------------  273 (515)
                            .                          .-...+++|+..+++....                            
T Consensus       361 ~d~~~~~p~~~~~~~~~~~~~~~~i~pg~~Gg~nw~~~a~dp~~~l~yvp~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~  440 (596)
T d1w6sa_         361 VDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYP  440 (596)
T ss_dssp             ECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEE
T ss_pred             ccccccccccCccccccCCccceeEecccccccccCccccCCCCceEEeccccccccccccccccccccccccccccccc
Confidence                  0                          0012345555444433211                            


Q ss_pred             -----------CCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEE
Q psy17610        274 -----------DGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNC  342 (515)
Q Consensus       274 -----------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~  342 (515)
                                 -|.+.-||+.+++..-......+..+-.+...+.+++.++.||.++.+|.++|+.+.++.......-.-
T Consensus       441 ~~~g~~~~~~~~G~l~A~D~~TG~~~W~~~~~~~~~gg~lsTagglVF~G~~Dg~l~A~Da~TGe~LW~~~~~~~~~a~P  520 (596)
T d1w6sa_         441 GPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYP  520 (596)
T ss_dssp             CTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCC
T ss_pred             CcccCcccCCCcceEEEEeCCCCceecccCCCCCCccceeEecCCEEEEECCCCeEEEEECCCCcEeeEEECCCCcccCC
Confidence                       156888898899888777666554444444567788889999999999999999999998664333333


Q ss_pred             EEEcCCCC-EEE
Q psy17610        343 VDFVDDGK-YFL  353 (515)
Q Consensus       343 ~~~~~~~~-~l~  353 (515)
                      +.+..+|+ |++
T Consensus       521 ~tY~~dGkQYva  532 (596)
T d1w6sa_         521 MTYTHKGTQYVA  532 (596)
T ss_dssp             EEEEETTEEEEE
T ss_pred             eEEEECCEEEEE
Confidence            55666776 344

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.51  E-value=0.00024  Score=66.56  Aligned_cols=80  Identities=9%  Similarity=0.099  Sum_probs=61.1

Q ss_pred             CcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCC-EEE
Q psy17610        275 GTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGK-YFL  353 (515)
Q Consensus       275 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~  353 (515)
                      |.+.-+|+.+++.+-....+.+...-.+...+..+++++.|+.++.+|.++|+.+.+++......-.-+.+..+|+ |++
T Consensus       466 G~l~AiD~~TG~i~W~~~~~~p~~~g~lstagglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~G~qYv~  545 (582)
T d1flga_         466 GSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLG  545 (582)
T ss_dssp             EEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred             CeEEEEcCCCCcEEeecCCCCCCccceeEEcCCeEEEeCCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCEEEEE
Confidence            5688899999999888877766554445566778888999999999999999999999876533333367777885 444


Q ss_pred             E
Q psy17610        354 T  354 (515)
Q Consensus       354 ~  354 (515)
                      +
T Consensus       546 i  546 (582)
T d1flga_         546 V  546 (582)
T ss_dssp             E
T ss_pred             E
Confidence            3

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=98.46  E-value=0.00015  Score=67.70  Aligned_cols=301  Identities=11%  Similarity=0.078  Sum_probs=169.8

Q ss_pred             CCEEEEEec-CceEEEEEC-CCCceeEEeeccCccC---------e-EEEEeCCCCcEEEEEecCCcEEEEeCCCCceeE
Q psy17610         93 NNKVFVGTV-NCEIFLIDM-NSGFTLTLVNTCHTSA---------I-YDLQFPVNFSSVFATCSKNDIRIWSVRTLNELL  160 (515)
Q Consensus        93 ~~~l~~~~~-d~~i~iw~~-~~~~~~~~~~~~h~~~---------v-~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~  160 (515)
                      +..|.+++. ++.|.-.|. ++|+.+-+........         + ..+++.  +..++.++.|+.+.-.|.++|+.+.
T Consensus        62 ~g~vyv~t~~~~~v~Alda~~tG~~~W~~~~~~~~~~~~~~~~~~~~rg~a~~--~~~i~~~~~~g~l~alda~tG~~~w  139 (571)
T d2ad6a1          62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYG--AGQIVKKQANGHLLALDAKTGKINW  139 (571)
T ss_dssp             TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEE--TTEEEEECTTSEEEEEETTTCCEEE
T ss_pred             CCEEEEecCCCCeEEEEeCCCCCceEEEecCCCCcccccccccCcCCCcceee--CCeEEEEeCCCcEEeeehhhhhhhc
Confidence            344555553 678888887 4677665532111110         0 123343  2478888899999999999999887


Q ss_pred             EEEecC----eEEEEEEEeeCCCEEEEEe------CCCeEEEEecCCCceEEEecCCC----------------------
Q psy17610        161 RISVMN----MICACIVFTYDGKAILSGW------NDGFIRCFTPQSGKLKFIIPNAH----------------------  208 (515)
Q Consensus       161 ~~~~~~----~~v~~~~~~~~~~~l~~~~------~dg~i~~~~~~~~~~~~~~~~~~----------------------  208 (515)
                      ......    ..++.--.-.++ .++.+.      ..|.|.-+|+.+|+.+.......                      
T Consensus       140 ~~~~~~~~~~~~~t~~p~v~~~-~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~~~~~~  218 (571)
T d2ad6a1         140 EVEVCDPKVGSTLTQAPFVAKD-TVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFG  218 (571)
T ss_dssp             EEECCCGGGTCBCCSCCEEETT-EEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSS
T ss_pred             cccccccccccceeecCeEeCC-eEEEeeccccccccCcEEEEECCCCcEEEEEeccCCcccccccccccccccccCccc
Confidence            765321    111111111233 455544      36889999999999988653211                      


Q ss_pred             --------------CCCe-EEEEEcCCCCEEEEecCC----------------CcEEEEEccCCceeeEEeecccc----
Q psy17610        209 --------------NRGV-TALAITQDGTRLLSGGGE----------------GQVRIWKLTRESQSLQCVLKEHT----  253 (515)
Q Consensus       209 --------------~~~v-~~~~~~~~~~~l~~~~~d----------------~~i~iw~~~~~~~~~~~~~~~~~----  253 (515)
                                    ...+ ...++.++...+..+..+                ..+.-.|.++.+.........|.    
T Consensus       219 ~~~~~~~~~~~~~~gg~vW~~~s~D~~~g~~y~~tg~~~p~~~~~r~g~n~~s~svvAld~~TG~~~W~~q~~~~D~Wd~  298 (571)
T d2ad6a1         219 LGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDF  298 (571)
T ss_dssp             HHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCC
T ss_pred             ccccccCCcccccCCCccccccccchhcCeeeeecccccCccccccccccccccceeeeeccchhheecccccCcccccc
Confidence                          0111 234566666666554432                34555566443333222222221    


Q ss_pred             ---CceEEEEEecCCC---EEEEEeCCCcEEEEEcccceEEEEEEcCc--------------------------------
Q psy17610        254 ---SSVSVIQIKSDSK---EAMSASTDGTCVLWDLIKSTRLIIMILPS--------------------------------  295 (515)
Q Consensus       254 ---~~v~~~~~~~~~~---~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--------------------------------  295 (515)
                         ..........+++   .++..+.+|.+.++|..+++.+.......                                
T Consensus       299 D~~~~~~l~~~~~~g~~~~~v~~~~k~G~l~vlDr~tG~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~  378 (571)
T d2ad6a1         299 AGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNI  378 (571)
T ss_dssp             CCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEE
T ss_pred             ccccccceeeeeccCccccceeeccccceEEEEecCCCcEeeeeccCCcccccccccccccccccCcccccccccCceEE
Confidence               1112222333443   45678889999999999988775432210                                


Q ss_pred             --------cEEEEEEcCCCcEEEEEECC-------------------------------------CeEEEEeCCCCceEE
Q psy17610        296 --------MIMSAAYHPSEVQLITCSTN-------------------------------------KMIDYWETCDGSIIR  330 (515)
Q Consensus       296 --------~~~~~~~~~~~~~l~~~~~~-------------------------------------~~i~~~d~~~~~~~~  330 (515)
                              .-...+++|+...+++...+                                     |.|.-+|+.+++.+.
T Consensus       379 ~p~~~Gg~~w~~~a~dP~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~AiD~~TG~~~W  458 (571)
T d2ad6a1         379 CPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKW  458 (571)
T ss_dssp             SSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEE
T ss_pred             EeccccccccccceECCCCceEEEeccccccccccccccccCCccccccceeeccccCCcccCCcccEEEeccCCCceee
Confidence                    00125667766666543322                                     467788888888887


Q ss_pred             EEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCC-CeeEEEECCCCc-EEEEEe
Q psy17610        331 SLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAA-SITKIKISPDKK-VIVSVS  398 (515)
Q Consensus       331 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~i~~~~~~~~~~-~l~~~~  398 (515)
                      +.....  +..+-.++-.+.++++|+.||.++-+|.++|+.+.++.-... .-.-+.|..||+ |+++..
T Consensus       459 ~~~~~~--~~~~g~l~TagglVf~G~~dg~l~A~Da~tGe~lW~~~l~~~~~a~P~ty~~dGkqYi~v~~  526 (571)
T d2ad6a1         459 TKWEKF--AAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYIGSMY  526 (571)
T ss_dssp             EEEESS--CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred             EcCCCC--CCCcceeEecCCEEEEECCCCeEEEEECCCCcEEEEEECCCCceecceEEEECCEEEEEEEe
Confidence            776442  111111222456788899999999999999999977643221 112244555775 554443

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=98.38  E-value=0.00036  Score=65.16  Aligned_cols=257  Identities=12%  Similarity=0.116  Sum_probs=150.2

Q ss_pred             CEEEEEecCceEEEEECCCCceeEEeecc-Cc-cCeEEEEeCC--CCcEEEEEec------CCcEEEEeCCCCceeEEEE
Q psy17610         94 NKVFVGTVNCEIFLIDMNSGFTLTLVNTC-HT-SAIYDLQFPV--NFSSVFATCS------KNDIRIWSVRTLNELLRIS  163 (515)
Q Consensus        94 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-h~-~~v~~~~~~~--~~~~l~~~~~------d~~i~iw~~~~~~~~~~~~  163 (515)
                      ..++.++.|+.+.-.|.++|+.+-..... +. ..+. +.-.|  -+..++++..      .|.|+-+|.++|+.+.++.
T Consensus       129 ~~v~~~t~~g~l~alda~tG~~~W~~~~~~~~~~~~~-~~~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~  207 (573)
T d1kb0a2         129 GKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLT-ITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWF  207 (573)
T ss_dssp             TEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCB-CCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred             CcEEEEecccceeeeccccccceecccCccCCcceEE-eecceEEEeccEEEeeccccccccceEEEEecCCccceeeee
Confidence            35667778888888888888766443221 11 1111 11111  1234555443      4679999999999998875


Q ss_pred             ecC-------------------------------eEE-EEEEEeeCCCEEEEEeC-------------------CCeEEE
Q psy17610        164 VMN-------------------------------MIC-ACIVFTYDGKAILSGWN-------------------DGFIRC  192 (515)
Q Consensus       164 ~~~-------------------------------~~v-~~~~~~~~~~~l~~~~~-------------------dg~i~~  192 (515)
                      ...                               ..+ ...++.++...++....                   ...|..
T Consensus       208 t~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~G~~vW~~~s~D~~~g~~~~~~g~~~~~~~~~~~~~~g~~~~~~svvA  287 (573)
T d1kb0a2         208 SVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVA  287 (573)
T ss_dssp             SSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEE
T ss_pred             eccccCCCCCCcccccccccccCCCCceeecCCCCcccccceEchhhCeeeeccCCCccccccccccccccccccceEEE
Confidence            321                               011 12455566555554321                   135777


Q ss_pred             EecCCCceEEEecCCCC--------CCeEEEEEcCCC---CEEEEecCCCcEEEEEccCCceeeEEeec-----------
Q psy17610        193 FTPQSGKLKFIIPNAHN--------RGVTALAITQDG---TRLLSGGGEGQVRIWKLTRESQSLQCVLK-----------  250 (515)
Q Consensus       193 ~~~~~~~~~~~~~~~~~--------~~v~~~~~~~~~---~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-----------  250 (515)
                      .|.++++........+.        .+........++   ..++.++.+|.+.++|..+.+........           
T Consensus       288 ld~~tG~~~W~~q~~~~d~wd~d~~~~~~l~~~~~~g~~~~~v~~~~k~G~l~~lDr~tGe~~~~~~~~~~~~~~~~~~~  367 (573)
T d1kb0a2         288 LDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKH  367 (573)
T ss_dssp             ECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTT
T ss_pred             ecccchheeecccccCcccccccccceeeecceecCCCceeeeeeccccceeEEeccccccccccccccccccccccccc
Confidence            88889988766543221        122222222233   35677888999999997544322111100           


Q ss_pred             --------------------ccc--CceEEEEEecCCCEEEEEeCC----------------------------------
Q psy17610        251 --------------------EHT--SSVSVIQIKSDSKEAMSASTD----------------------------------  274 (515)
Q Consensus       251 --------------------~~~--~~v~~~~~~~~~~~l~~~~~d----------------------------------  274 (515)
                                          +-.  ..-..++++|+...++....+                                  
T Consensus       368 ~~~~~~~~~~~~~~~~~~~pg~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  447 (573)
T d1kb0a2         368 GKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFN  447 (573)
T ss_dssp             SCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEEC
T ss_pred             cceeeeeeccccccceEEeecccCCccccccccCCCcceEEeeccccceeeecccccccccCCCCccccccccccccccc
Confidence                                000  001123566665555442211                                  


Q ss_pred             ---------CcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEE
Q psy17610        275 ---------GTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDF  345 (515)
Q Consensus       275 ---------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~  345 (515)
                               |.+.-||+.+++.+-......+...-...-.+..+++++.|+.++.+|.++|+.+.++.......-.-+.|
T Consensus       448 ~~p~~~~~~G~l~AiD~~tGk~~W~~~~~~p~~gg~lstagglVF~G~~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty  527 (573)
T d1kb0a2         448 AEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTY  527 (573)
T ss_dssp             SSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEE
T ss_pred             cCCCCCCCcccEEEeCCCCCceEeeecCCCCCCCceEEEcCCEEEEECCCCeEEEEECCCCcEeEEEECCCCccccCEEE
Confidence                     35788899999988888776654443445567888899999999999999999999998754222222555


Q ss_pred             cCCCCE
Q psy17610        346 VDDGKY  351 (515)
Q Consensus       346 ~~~~~~  351 (515)
                      ..+|+.
T Consensus       528 ~~~GkQ  533 (573)
T d1kb0a2         528 MVDGRQ  533 (573)
T ss_dssp             EETTEE
T ss_pred             EECCEE
Confidence            567763

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=98.36  E-value=0.00086  Score=62.33  Aligned_cols=301  Identities=12%  Similarity=0.147  Sum_probs=174.6

Q ss_pred             CCEEEEEecCceEEEEECCCCceeEEeeccC------cc---Ce-EEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEE
Q psy17610         93 NNKVFVGTVNCEIFLIDMNSGFTLTLVNTCH------TS---AI-YDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRI  162 (515)
Q Consensus        93 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h------~~---~v-~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~  162 (515)
                      +..|.+++.++.|.-.|.++|+.+-+.....      ..   .+ ..++.  .+..++.+..++.+.-.|..+|+.+...
T Consensus        66 ~g~vyv~t~~~~v~AlDa~tG~~lW~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~g~l~Alda~tG~~~w~~  143 (560)
T d1kv9a2          66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQ  143 (560)
T ss_dssp             TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             CCEEEEECCCCeEEEEeCCCCCEEEEECCCCCccccccccccccccCcce--eCCeEEEEeCCCEEEEEECCCCcEEecc
Confidence            4567778889999999999997776532110      00   00 11111  1347888888999999999999998877


Q ss_pred             EecCe----EEEEEEEeeCCCEEEEEeC------CCeEEEEecCCCceEEEecCCCC-----------------------
Q psy17610        163 SVMNM----ICACIVFTYDGKAILSGWN------DGFIRCFTPQSGKLKFIIPNAHN-----------------------  209 (515)
Q Consensus       163 ~~~~~----~v~~~~~~~~~~~l~~~~~------dg~i~~~~~~~~~~~~~~~~~~~-----------------------  209 (515)
                      .....    .++..-.-.++ .++.+..      .|.|.-+|.++|+.+..+.....                       
T Consensus       144 ~~~~~~~~~~~~~~p~v~~~-~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (560)
T d1kv9a2         144 QTTDPAKPYSITGAPRVVKG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQY  222 (560)
T ss_dssp             ECSCTTSSCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCH
T ss_pred             CccCcccceeeeeeeeeecC-cccccccceeccccceEEEEECCCceEEeeeeeccccccCCcccccccccccccccccc
Confidence            63321    01100001123 3444332      36799999999999887642211                       


Q ss_pred             ------CC-eEEEEEcCCCCEEEEecC-------------------CCcEEEEEccCCceeeEEeeccccC-------ce
Q psy17610        210 ------RG-VTALAITQDGTRLLSGGG-------------------EGQVRIWKLTRESQSLQCVLKEHTS-------SV  256 (515)
Q Consensus       210 ------~~-v~~~~~~~~~~~l~~~~~-------------------d~~i~iw~~~~~~~~~~~~~~~~~~-------~v  256 (515)
                            .. =..+++.+...++..+..                   ...|.-.|+++.+.........|.-       ..
T Consensus       223 ~~~~~G~~~W~~~s~D~~~~l~y~~tgn~~~~~~~~~~~~~g~n~~s~sivAld~~tG~~~W~~Q~~~~D~wd~d~~~~~  302 (560)
T d1kv9a2         223 WKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQI  302 (560)
T ss_dssp             HHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCE
T ss_pred             ccccCCCCcccccccccccCeeeecCCCCcccccccccccCCccccceeeEEecCCccceeEEEecccccccccccccee
Confidence                  01 112456666665554322                   1234445554433333322222211       11


Q ss_pred             EEEEEecCCC---EEEEEeCCCcEEEEEcccceEEEEEEcCcc-------------------------------------
Q psy17610        257 SVIQIKSDSK---EAMSASTDGTCVLWDLIKSTRLIIMILPSM-------------------------------------  296 (515)
Q Consensus       257 ~~~~~~~~~~---~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-------------------------------------  296 (515)
                      .-.....+++   .++.+..+|.+.++|..+++.+........                                     
T Consensus       303 ~l~~~~~~g~~~~~v~~~~k~G~~~~lDr~tG~~i~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~p~~~Gg~~  382 (560)
T d1kv9a2         303 TLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHN  382 (560)
T ss_dssp             EEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSC
T ss_pred             eeeeeecCCceeeeeeecCccceEEEEecCCCcccccccccccccccccChhhccccccccccccccceeeeeccccccc
Confidence            1122233443   466788899999999999988765432210                                     


Q ss_pred             EEEEEEcCCCcEEEEEEC------------------------------------CCeEEEEeCCCCceEEEEecCCCccE
Q psy17610        297 IMSAAYHPSEVQLITCST------------------------------------NKMIDYWETCDGSIIRSLEGSDVAAV  340 (515)
Q Consensus       297 ~~~~~~~~~~~~l~~~~~------------------------------------~~~i~~~d~~~~~~~~~~~~~~~~~i  340 (515)
                      -...+++|+...+++...                                    .|.+.-+|+.+++.+.+.....  +.
T Consensus       383 w~~~a~dp~~~~~yvp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~G~l~A~D~~tGk~~W~~~~~~--~~  460 (560)
T d1kv9a2         383 WHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPT--HW  460 (560)
T ss_dssp             SSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESS--SC
T ss_pred             cccccccCCCCeeecccccccceeeccccccccccccccccCcccccCCCCcccccceEEEeCCCCeEeeeccCCC--CC
Confidence            124556777666665332                                    2568889999999988876543  22


Q ss_pred             EEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCe-eEEEECCCCc-EEEEEe
Q psy17610        341 NCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASI-TKIKISPDKK-VIVSVS  398 (515)
Q Consensus       341 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i-~~~~~~~~~~-~l~~~~  398 (515)
                      ..-.+.-.+.++++|+.||.++-+|.++|+.+.++.-..... .-+.+.-+|+ ||++..
T Consensus       461 ~gg~l~TagglVF~G~~dg~l~A~Da~tGe~LW~~~l~~~~~~~P~ty~~dGkqyv~v~a  520 (560)
T d1kv9a2         461 NGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQYVAIMA  520 (560)
T ss_dssp             CCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred             CCceeEECCCEEEEECCCCcEEEEECCCCcEeEEEECCCCccccCEEEEECCEEEEEEEe
Confidence            221233346688899999999999999999998765332111 1244445775 555443

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=98.34  E-value=6.1e-05  Score=67.08  Aligned_cols=270  Identities=11%  Similarity=0.007  Sum_probs=144.1

Q ss_pred             EEeCCCCcEEEEEecC-----C------cEEEEeCCCCceeE--EEE-ecCeEEEEEEEeeCCCEEEEEeCC-CeEEEEe
Q psy17610        130 LQFPVNFSSVFATCSK-----N------DIRIWSVRTLNELL--RIS-VMNMICACIVFTYDGKAILSGWND-GFIRCFT  194 (515)
Q Consensus       130 ~~~~~~~~~l~~~~~d-----~------~i~iw~~~~~~~~~--~~~-~~~~~v~~~~~~~~~~~l~~~~~d-g~i~~~~  194 (515)
                      .....+|+.++.++.+     +      .+.+||..+++-..  ... .+.......++.++++.++.|+.+ ..+.+||
T Consensus        25 a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~~~~yd  104 (387)
T d1k3ia3          25 AIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYD  104 (387)
T ss_dssp             EEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEE
T ss_pred             EEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeecCCCcceeEec
Confidence            3344566666665531     1      26789998775322  222 122223456788999988888655 5899999


Q ss_pred             cCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCC------CcEEEEEccCCceeeEEeecc-------cc-----Cce
Q psy17610        195 PQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGE------GQVRIWKLTRESQSLQCVLKE-------HT-----SSV  256 (515)
Q Consensus       195 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~iw~~~~~~~~~~~~~~~-------~~-----~~v  256 (515)
                      ..+......-.......-...+..++|+.++.|+.+      ..+.+||....+.........       +.     ..-
T Consensus       105 ~~~~~w~~~~~~~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~  184 (387)
T d1k3ia3         105 SSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNH  184 (387)
T ss_dssp             GGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCS
T ss_pred             CccCcccccccccccccccceeeecCCceeeeccccccccccceeeeecCCCCceeecCCCcccccccccccceeeccce
Confidence            988776543222222233466778899999988753      368999987655433221110       00     001


Q ss_pred             EEEEEecCCCEEEEEeCCCcEEEEEcccceEEEEEEcCc---------cEEEEEE-cCCCcEEEEEECCC--------eE
Q psy17610        257 SVIQIKSDSKEAMSASTDGTCVLWDLIKSTRLIIMILPS---------MIMSAAY-HPSEVQLITCSTNK--------MI  318 (515)
Q Consensus       257 ~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---------~~~~~~~-~~~~~~l~~~~~~~--------~i  318 (515)
                      ..+...++++.+..+..++.+..++..+.........+.         .-.++.+ ..+++.++.++...        ..
T Consensus       185 ~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~GG~~~~~~~~~~~~~  264 (387)
T d1k3ia3         185 AWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNA  264 (387)
T ss_dssp             CCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCE
T ss_pred             eEEEEeCCCCEEEecCcCCcEEecCcccCcEeeccccccCcccCcccccccEEEeeccCCceEEEEeccCCCCCccccee
Confidence            112234567777777777777777776655433221111         1122222 33566666665321        22


Q ss_pred             EEEeCCCC---ceEEEEec--CCCccEEEEEEcCCCCEEEEEcCC-----------CeEEEEEccCCeeee--eccCCCC
Q psy17610        319 DYWETCDG---SIIRSLEG--SDVAAVNCVDFVDDGKYFLTGGAD-----------QIVKMWMYREGVPCF--VGIGHAA  380 (515)
Q Consensus       319 ~~~d~~~~---~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~d-----------g~i~i~d~~~~~~~~--~~~~~~~  380 (515)
                      .+.+....   ........  .....-.+....+||+++++|+.+           ..+.+||..+.+-..  .......
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~dg~i~v~GG~~~~~~~~~~~~~~~ve~Ydp~~~~W~~~~~~~~~R~  344 (387)
T d1k3ia3         265 HIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRV  344 (387)
T ss_dssp             EEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCC
T ss_pred             ecccccccccCCCceeeccccccccccceeeeccCCeEEEECCcccCccCCCCcEeceEEEEECCCCeEEECCCCCCccc
Confidence            33332221   11111110  111222355667899999998843           147889987764221  1111111


Q ss_pred             CeeEEEECCCCcEEEEEeC
Q psy17610        381 SITKIKISPDKKVIVSVSA  399 (515)
Q Consensus       381 ~i~~~~~~~~~~~l~~~~~  399 (515)
                      .-....+.+||+.++.|+.
T Consensus       345 ~Hs~a~l~~dG~v~v~GG~  363 (387)
T d1k3ia3         345 YHSISLLLPDGRVFNGGGG  363 (387)
T ss_dssp             TTEEEEECTTSCEEEEECC
T ss_pred             ceEEEEECCCCEEEEEeCC
Confidence            1122346789999998874

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.31  E-value=0.00046  Score=64.56  Aligned_cols=259  Identities=10%  Similarity=0.055  Sum_probs=149.8

Q ss_pred             cEEEEEecCCcEEEEeCCCCceeEEEEecCe----EEEEEEEeeCCCEEEEEeC------CCeEEEEecCCCceEEEecC
Q psy17610        137 SSVFATCSKNDIRIWSVRTLNELLRISVMNM----ICACIVFTYDGKAILSGWN------DGFIRCFTPQSGKLKFIIPN  206 (515)
Q Consensus       137 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~----~v~~~~~~~~~~~l~~~~~------dg~i~~~~~~~~~~~~~~~~  206 (515)
                      ..++.++.|+.+.-.|.++|+.+..+.....    .++.--.- -+..++++..      .|.|+-+|+++|+.+.++..
T Consensus       122 ~~v~~~t~dg~l~Alda~tG~~~w~~~~~d~~~~~~~t~~P~v-~~~~vivg~~~~e~~~~G~v~A~Da~TG~~~W~~~t  200 (596)
T d1w6sa_         122 ALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYV-VKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA  200 (596)
T ss_dssp             CEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE-ETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred             eEEEEEeCCCCeEeeccccCceeccccccccccccccccCCcE-ECCeEEEeeccccccccCceEEEECCCCcEEEEeec
Confidence            4688888899999999999999988753211    11110011 1334555543      48999999999999877532


Q ss_pred             CC-------------------------------------CCCeEEEEEcCCCCEEEEecCC----------------CcE
Q psy17610        207 AH-------------------------------------NRGVTALAITQDGTRLLSGGGE----------------GQV  233 (515)
Q Consensus       207 ~~-------------------------------------~~~v~~~~~~~~~~~l~~~~~d----------------~~i  233 (515)
                      ..                                     ...-..+++.+....+..+..+                ..+
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~tw~g~~~~~gg~~~W~~~s~D~~~~lvy~~tg~~~p~~~~~r~g~n~ys~si  280 (596)
T d1w6sa_         201 TGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTI  280 (596)
T ss_dssp             SSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEE
T ss_pred             cCCccccccccccccccccccccccccccCCCCceecCCCccccccccccCCCeeecccccccccccccccccccccccc
Confidence            11                                     0011234566666666555332                235


Q ss_pred             EEEEccCCceeeEEeeccccC-------ceEEEEE-ecCCC---EEEEEeCCCcEEEEEcccceEEEEEEcCcc------
Q psy17610        234 RIWKLTRESQSLQCVLKEHTS-------SVSVIQI-KSDSK---EAMSASTDGTCVLWDLIKSTRLIIMILPSM------  296 (515)
Q Consensus       234 ~iw~~~~~~~~~~~~~~~~~~-------~v~~~~~-~~~~~---~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~------  296 (515)
                      .-.|+++.+.........|..       ....+.. ..+++   .++....+|.+.++|..+++.+........      
T Consensus       281 vAlD~~TG~~~W~~Q~~~~D~Wd~d~~~~~~l~d~~~~~G~~~~~v~~~~k~G~~~vlDr~tG~~i~~~~~~~~~~~~~~  360 (596)
T d1w6sa_         281 FGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKS  360 (596)
T ss_dssp             EEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEE
T ss_pred             cccccccccccccccceeccccCCccccceeeeeccccccccccceeccccccceeeecCCCCceeeecccccccccccc
Confidence            566765444333333333321       1111111 22443   467788899999999999887765432110      


Q ss_pred             ----------------------------------EEEEEEcCCCcEEEEEEC----------------------------
Q psy17610        297 ----------------------------------IMSAAYHPSEVQLITCST----------------------------  314 (515)
Q Consensus       297 ----------------------------------~~~~~~~~~~~~l~~~~~----------------------------  314 (515)
                                                        -..++++|+..+++....                            
T Consensus       361 ~d~~~~~p~~~~~~~~~~~~~~~~i~pg~~Gg~nw~~~a~dp~~~l~yvp~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~  440 (596)
T d1w6sa_         361 VDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYP  440 (596)
T ss_dssp             ECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEE
T ss_pred             ccccccccccCccccccCCccceeEecccccccccCccccCCCCceEEeccccccccccccccccccccccccccccccc
Confidence                                              012355565555543321                            


Q ss_pred             -----------CCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCC-e
Q psy17610        315 -----------NKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAAS-I  382 (515)
Q Consensus       315 -----------~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-i  382 (515)
                                 .|.+.-||+.+++.+.+.....  +...-.++..|.+++.|+.||.++.+|.++|+.+.++.-.... -
T Consensus       441 ~~~g~~~~~~~~G~l~A~D~~TG~~~W~~~~~~--~~~gg~lsTagglVF~G~~Dg~l~A~Da~TGe~LW~~~~~~~~~a  518 (596)
T d1w6sa_         441 GPKGDRQNYEGLGQIKAYNAITGDYKWEKMERF--AVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIG  518 (596)
T ss_dssp             CTTSBTTTTBCCEEEEEECTTTCCEEEEEEESS--CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCS
T ss_pred             CcccCcccCCCcceEEEEeCCCCceecccCCCC--CCccceeEecCCEEEEECCCCeEEEEECCCCcEeeEEECCCCccc
Confidence                       1567888888888877665432  2222222335678888999999999999999999876432211 1


Q ss_pred             eEEEECCCCc-EEEEEe
Q psy17610        383 TKIKISPDKK-VIVSVS  398 (515)
Q Consensus       383 ~~~~~~~~~~-~l~~~~  398 (515)
                      .-+.|.-+|+ |++...
T Consensus       519 ~P~tY~~dGkQYvav~~  535 (596)
T d1w6sa_         519 YPMTYTHKGTQYVAIYY  535 (596)
T ss_dssp             CCEEEEETTEEEEEEEE
T ss_pred             CCeEEEECCEEEEEEEe
Confidence            1133444665 455443

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=98.29  E-value=0.00062  Score=63.55  Aligned_cols=301  Identities=11%  Similarity=0.123  Sum_probs=168.5

Q ss_pred             CCEEEEEecCceEEEEECCCCceeEEeeccC------c---cCe-EEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEE
Q psy17610         93 NNKVFVGTVNCEIFLIDMNSGFTLTLVNTCH------T---SAI-YDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRI  162 (515)
Q Consensus        93 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h------~---~~v-~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~  162 (515)
                      +..|.+++.++.|.-+|.++|+.+-......      .   ..+ ..+...  +..++.++.|+.+.-.|.++|+.+...
T Consensus        77 ~g~vyv~t~~~~v~AlDa~TG~~~W~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~v~~~t~~g~l~alda~tG~~~W~~  154 (573)
T d1kb0a2          77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALW--KGKVYVGAWDGRLIALDAATGKEVWHQ  154 (573)
T ss_dssp             TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             CCEEEEECCCCeEEEEeCCCCCeEEEeCCCCCcccccccccccccccceEE--CCcEEEEecccceeeeccccccceecc
Confidence            4467778888999999999987665432110      0   011 112222  236778888999988999999988776


Q ss_pred             EecCeE---E--EEEEEeeCCCEEEEEeC------CCeEEEEecCCCceEEEecCCCC----------------------
Q psy17610        163 SVMNMI---C--ACIVFTYDGKAILSGWN------DGFIRCFTPQSGKLKFIIPNAHN----------------------  209 (515)
Q Consensus       163 ~~~~~~---v--~~~~~~~~~~~l~~~~~------dg~i~~~~~~~~~~~~~~~~~~~----------------------  209 (515)
                      ......   +  +..-.-. +..++++..      .|.|..+|.++|+.+..+.....                      
T Consensus       155 ~~~~~~~~~~~~~~~p~v~-~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~t~~~~~  233 (573)
T d1kb0a2         155 NTFEGQKGSLTITGAPRVF-KGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSG  233 (573)
T ss_dssp             ETTTTCCSSCBCCSCCEEE-TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGG
T ss_pred             cCccCCcceEEeecceEEE-eccEEEeeccccccccceEEEEecCCccceeeeeeccccCCCCCCcccccccccccCCCC
Confidence            532111   1  1100111 234555432      46899999999999877532110                      


Q ss_pred             --------CCe-EEEEEcCCCCEEEEecCC-------------------CcEEEEEccCCceeeEEeeccc-------cC
Q psy17610        210 --------RGV-TALAITQDGTRLLSGGGE-------------------GQVRIWKLTRESQSLQCVLKEH-------TS  254 (515)
Q Consensus       210 --------~~v-~~~~~~~~~~~l~~~~~d-------------------~~i~iw~~~~~~~~~~~~~~~~-------~~  254 (515)
                              ..+ ...++.++...+..+..+                   ..|.-.|.++.+.........|       ..
T Consensus       234 ~~~~~~~G~~vW~~~s~D~~~g~~~~~~g~~~~~~~~~~~~~~g~~~~~~svvAld~~tG~~~W~~q~~~~d~wd~d~~~  313 (573)
T d1kb0a2         234 KWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQ  313 (573)
T ss_dssp             CHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCS
T ss_pred             ceeecCCCCcccccceEchhhCeeeeccCCCccccccccccccccccccceEEEecccchheeecccccCcccccccccc
Confidence                    011 124555655555433211                   1233334432222222211111       11


Q ss_pred             ceEEEEEecCC---CEEEEEeCCCcEEEEEcccceEEEEEEcCc------------------------------------
Q psy17610        255 SVSVIQIKSDS---KEAMSASTDGTCVLWDLIKSTRLIIMILPS------------------------------------  295 (515)
Q Consensus       255 ~v~~~~~~~~~---~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~------------------------------------  295 (515)
                      +........++   ..++.++.+|.+.++|..+++.+.......                                    
T Consensus       314 ~~~l~~~~~~g~~~~~v~~~~k~G~l~~lDr~tGe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~Gg~  393 (573)
T d1kb0a2         314 PMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAH  393 (573)
T ss_dssp             CCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSS
T ss_pred             eeeecceecCCCceeeeeeccccceeEEeccccccccccccccccccccccccccceeeeeeccccccceEEeecccCCc
Confidence            12222222333   346778889999999999998876543210                                    


Q ss_pred             cEEEEEEcCCCcEEEEEECC-------------------------------------------CeEEEEeCCCCceEEEE
Q psy17610        296 MIMSAAYHPSEVQLITCSTN-------------------------------------------KMIDYWETCDGSIIRSL  332 (515)
Q Consensus       296 ~~~~~~~~~~~~~l~~~~~~-------------------------------------------~~i~~~d~~~~~~~~~~  332 (515)
                      .-..++++|+...+++...+                                           |.+.-+|+.+++.+.+.
T Consensus       394 ~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~~~G~l~AiD~~tGk~~W~~  473 (573)
T d1kb0a2         394 NWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSV  473 (573)
T ss_dssp             CSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEE
T ss_pred             cccccccCCCcceEEeeccccceeeecccccccccCCCCccccccccccccccccCCCCCCCcccEEEeCCCCCceEeee
Confidence            01124566766655543221                                           35777888888888877


Q ss_pred             ecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCCee-EEEECCCCc-EEEEEe
Q psy17610        333 EGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAASIT-KIKISPDKK-VIVSVS  398 (515)
Q Consensus       333 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~-~~~~~~~~~-~l~~~~  398 (515)
                      +....  ...-..+-.|.++++|+.||.++.+|.++|+.+.++.-...... -+.|.-+|+ |++..+
T Consensus       474 ~~~~p--~~gg~lstagglVF~G~~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~GkQYv~v~~  539 (573)
T d1kb0a2         474 EHVSP--WNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVSVAV  539 (573)
T ss_dssp             EESSS--CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred             cCCCC--CCCceEEEcCCEEEEECCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCEEEEEEEe
Confidence            65431  11112233577888999999999999999999987653322111 144445775 444443

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=98.25  E-value=0.00087  Score=59.27  Aligned_cols=280  Identities=11%  Similarity=0.063  Sum_probs=146.7

Q ss_pred             CeEEEEEcCCCCEEEEecCCC-----------cEEEEEccCCceeeEEee-ccccCceEEEEEecCCCEEEEEeCC-CcE
Q psy17610        211 GVTALAITQDGTRLLSGGGEG-----------QVRIWKLTRESQSLQCVL-KEHTSSVSVIQIKSDSKEAMSASTD-GTC  277 (515)
Q Consensus       211 ~v~~~~~~~~~~~l~~~~~d~-----------~i~iw~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d-~~i  277 (515)
                      ++.......+|+.++.|+.+.           .+.+||..+++....... ..+.......++.++++.++.++.+ ..+
T Consensus        21 ~~~~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~~  100 (387)
T d1k3ia3          21 PAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKT  100 (387)
T ss_dssp             CSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCE
T ss_pred             ccEEEEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeecCCCcce
Confidence            334444555777777776421           367899976655433322 2233334456788999998888765 589


Q ss_pred             EEEEcccceEEEEEEcCc--cEEEEEEcCCCcEEEEEECC------CeEEEEeCCCCceEEEEecCCC------------
Q psy17610        278 VLWDLIKSTRLIIMILPS--MIMSAAYHPSEVQLITCSTN------KMIDYWETCDGSIIRSLEGSDV------------  337 (515)
Q Consensus       278 ~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~------~~i~~~d~~~~~~~~~~~~~~~------------  337 (515)
                      .+||..+..-...-..+.  .-..++..++++.++.++..      ..+.+||..+.+-...-.....            
T Consensus       101 ~~yd~~~~~w~~~~~~~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~  180 (387)
T d1k3ia3         101 SLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYR  180 (387)
T ss_dssp             EEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGT
T ss_pred             eEecCccCcccccccccccccccceeeecCCceeeeccccccccccceeeeecCCCCceeecCCCcccccccccccceee
Confidence            999998876544322222  24567778899998888753      3588999887653221110000            


Q ss_pred             -ccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeec--cC----CCC--CeeEEEE-CCCCcEEEEEeCCC------
Q psy17610        338 -AAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVG--IG----HAA--SITKIKI-SPDKKVIVSVSADG------  401 (515)
Q Consensus       338 -~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~--~~----~~~--~i~~~~~-~~~~~~l~~~~~dg------  401 (515)
                       ..-..+...++|+.+..+...+.+.+++..+.......  ..    +..  .-.++.+ ..+++.++.++...      
T Consensus       181 ~~~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~GG~~~~~~~~~  260 (387)
T d1k3ia3         181 SDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDA  260 (387)
T ss_dssp             TTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBC
T ss_pred             ccceeEEEEeCCCCEEEecCcCCcEEecCcccCcEeeccccccCcccCcccccccEEEeeccCCceEEEEeccCCCCCcc
Confidence             00111233456777777777777777777665432211  00    111  1112222 23556666655321      


Q ss_pred             --cEEEEeCCCCcCccCCCcccceeeecccccccceeeecCcccEEEeeeccCCcEEEEeecCC-----------eEEEE
Q psy17610        402 --GIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNK-----------MIDYW  468 (515)
Q Consensus       402 --~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg-----------~v~iw  468 (515)
                        ...+.++........       ..       ........+..-.+....+++++++.|+.+.           .+.+|
T Consensus       261 ~~~~~~~~~~~~~~~~~-------~~-------~~~~~~p~~r~~~~~~~~~dg~i~v~GG~~~~~~~~~~~~~~~ve~Y  326 (387)
T d1k3ia3         261 TTNAHIITLGEPGTSPN-------TV-------FASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIY  326 (387)
T ss_dssp             CCCEEEEECCSTTSCCE-------EE-------ECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEE
T ss_pred             cceeecccccccccCCC-------ce-------eeccccccccccceeeeccCCeEEEECCcccCccCCCCcEeceEEEE
Confidence              122222221110000       00       0000000111223455568999999887431           47899


Q ss_pred             ecCCCeeeeeeccccc-ceEEEEEEcCCCcEEEEeec
Q psy17610        469 ETCDGSIIRSLEGSDV-AAVNCVDFVDDGKYFLTGGA  504 (515)
Q Consensus       469 d~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~s~~~  504 (515)
                      |.++.+-...-..... ..-....+.+||+.|+.|+.
T Consensus       327 dp~~~~W~~~~~~~~~R~~Hs~a~l~~dG~v~v~GG~  363 (387)
T d1k3ia3         327 VPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG  363 (387)
T ss_dssp             EGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred             ECCCCeEEECCCCCCcccceEEEEECCCCEEEEEeCC
Confidence            9887753322111110 01123446799999999884

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.13  E-value=0.0015  Score=54.01  Aligned_cols=232  Identities=12%  Similarity=0.010  Sum_probs=139.0

Q ss_pred             EEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec-CCcEEEEeCCCCc---eeEEE-EecCeEE
Q psy17610         95 KVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS-KNDIRIWSVRTLN---ELLRI-SVMNMIC  169 (515)
Q Consensus        95 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~---~~~~~-~~~~~~v  169 (515)
                      +|+.+... .|+..++++. ....+.. ....+.+++|.+..+.++-+.. .+.|.--++....   ....+ ......+
T Consensus         3 fLl~s~~~-~I~~~~l~~~-~~~~~~~-~~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~p   79 (266)
T d1ijqa1           3 YLFFTNRH-EVRKMTLDRS-EYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP   79 (266)
T ss_dssp             EEEEECBS-SEEEEETTSC-CCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCC
T ss_pred             EEEEECCC-eEEEEECCCC-cceeeeC-CCCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCCCc
Confidence            45554443 6888899874 4344444 4556789999988878877754 5667666664322   11222 2222345


Q ss_pred             EEEEEeeCCCEEEEE-eCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEec--CCCcEEEEEccCCceeeE
Q psy17610        170 ACIVFTYDGKAILSG-WNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGG--GEGQVRIWKLTRESQSLQ  246 (515)
Q Consensus       170 ~~~~~~~~~~~l~~~-~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~iw~~~~~~~~~~  246 (515)
                      ..+++.+.+..|..+ ...+.|.+.++......... .........++++|...+|....  ..+.|.-.+++...  ..
T Consensus        80 ~glAvD~~~~~lY~~d~~~~~I~v~~~~g~~~~~~~-~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~--~~  156 (266)
T d1ijqa1          80 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLF-RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD--IY  156 (266)
T ss_dssp             CEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEE-ECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC--EE
T ss_pred             ceEEEeeccceEEEEecCCCEEEeEecCCceEEEEE-cCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCc--ee
Confidence            678888767666655 45678999999877655444 34556688999998665555443  33456666664322  22


Q ss_pred             EeeccccCceEEEEEecCCCEEEEE-eCCCcEEEEEcccceEEEEEEcC---ccEEEEEEcCCCcEEEEE-ECCCeEEEE
Q psy17610        247 CVLKEHTSSVSVIQIKSDSKEAMSA-STDGTCVLWDLIKSTRLIIMILP---SMIMSAAYHPSEVQLITC-STNKMIDYW  321 (515)
Q Consensus       247 ~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~-~~~~~i~~~  321 (515)
                      ......-.....+++.+.++.|+.+ ...+.|...++............   .....+++.  +..++.. ..++.|...
T Consensus       157 ~l~~~~~~~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG~~~~~~~~~~~~~~~p~~lav~--~~~ly~td~~~~~I~~~  234 (266)
T d1ijqa1         157 SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSA  234 (266)
T ss_dssp             EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEE
T ss_pred             cccccccceeeEEEeeccccEEEEecCCcCEEEEEECCCCCEEEEEeCCCcccccEEEEEE--CCEEEEEECCCCeEEEE
Confidence            2223333556889999888877766 44678888888655443333332   235566665  3344443 356777777


Q ss_pred             eCCCCceEEEEec
Q psy17610        322 ETCDGSIIRSLEG  334 (515)
Q Consensus       322 d~~~~~~~~~~~~  334 (515)
                      +..+++....+..
T Consensus       235 ~~~~g~~~~~~~~  247 (266)
T d1ijqa1         235 NRLTGSDVNLLAE  247 (266)
T ss_dssp             ETTTCCCCEEEEC
T ss_pred             ECCCCcceEEEEc
Confidence            7777665555443

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.10  E-value=0.004  Score=58.02  Aligned_cols=301  Identities=12%  Similarity=0.095  Sum_probs=166.7

Q ss_pred             CCEEEEEecCceEEEEECCCCceeEEeeccCc-------cCe-EEEEeCCCCcEEEEEecCCcEEEEeCCCCceeEEEEe
Q psy17610         93 NNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHT-------SAI-YDLQFPVNFSSVFATCSKNDIRIWSVRTLNELLRISV  164 (515)
Q Consensus        93 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~-------~~v-~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~  164 (515)
                      +..|.+++.++.|.-.|.++|+.+-.......       ..+ ..++..  +..++.++.++.+.-.|.++|+.+.....
T Consensus        68 ~g~vy~~t~~~~v~AlDa~TG~~lW~~~~~~~~~~~~~~~~~~rg~a~~--~~~i~~~t~~~~l~alda~tG~~~W~~~~  145 (582)
T d1flga_          68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIY--GDKVFFGTLDASVVALNKNTGKVVWKKKF  145 (582)
T ss_dssp             TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEE--TTEEEEEETTTEEEEEESSSCCEEEEEEC
T ss_pred             CCEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCCccccccccccCCceEe--CCceEEecCCCeEEEecccccceeeeecc
Confidence            45677788888999999999877655321100       011 112222  34788888899999999999998866542


Q ss_pred             cCe----EEE-E-EEEee--CCCEEEEE-------eCCCeEEEEecCCCceEEEecCCCC--------------------
Q psy17610        165 MNM----ICA-C-IVFTY--DGKAILSG-------WNDGFIRCFTPQSGKLKFIIPNAHN--------------------  209 (515)
Q Consensus       165 ~~~----~v~-~-~~~~~--~~~~l~~~-------~~dg~i~~~~~~~~~~~~~~~~~~~--------------------  209 (515)
                      ...    ..+ . ....+  .+..++..       ...+.|.-+|.++|+.+..+.....                    
T Consensus       146 ~~~~~~~~~~~~p~~~~~~~~~~~~~i~g~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~d~~~~g~~~~~~  225 (582)
T d1flga_         146 ADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPS  225 (582)
T ss_dssp             SCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTT
T ss_pred             cCCCccceeecCceEecCCcEeEEEEEeCccccccccccceEEecCCCCcEEEEEeccCCcccccccccccccccccccc
Confidence            111    000 0 11111  12333333       2346789999999998776532110                    


Q ss_pred             -------------------CC-eEEEEEcCCCCEEEEecC------------------------CCcEEEEEccCCceee
Q psy17610        210 -------------------RG-VTALAITQDGTRLLSGGG------------------------EGQVRIWKLTRESQSL  245 (515)
Q Consensus       210 -------------------~~-v~~~~~~~~~~~l~~~~~------------------------d~~i~iw~~~~~~~~~  245 (515)
                                         .. -..+++.+...++..+..                        ...+.-.|.++.....
T Consensus       226 ~~~~~~~~~~~~~~~~~~gg~vW~~~s~D~~~~~vy~~tgn~~p~~~~~~~~~g~~~~~~dn~ys~SvvAld~~tG~~~W  305 (582)
T d1flga_         226 WPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKW  305 (582)
T ss_dssp             SCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEE
T ss_pred             CCCccccccCCccceecCCCcccccceeccccceEEeccCCcccccccccccCCCCcCcccccccceeEEecccchhhhh
Confidence                               01 123566666565554321                        1234444554433333


Q ss_pred             EEeeccccCc-------eEEEEEe-cCCC---EEEEEeCCCcEEEEEcccceEEEEEEcCc-------------------
Q psy17610        246 QCVLKEHTSS-------VSVIQIK-SDSK---EAMSASTDGTCVLWDLIKSTRLIIMILPS-------------------  295 (515)
Q Consensus       246 ~~~~~~~~~~-------v~~~~~~-~~~~---~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-------------------  295 (515)
                      ......|.-.       ...+.+. .+++   .++..+.++.+.+.|..+++.+.......                   
T Consensus       306 ~~q~~~~D~wd~d~~~~p~l~d~~~~~g~~~~~v~~~~k~g~~~vldr~tG~~i~~~~~~~~~~~~~~~d~~~~~~~~~~  385 (582)
T d1flga_         306 FYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVERE  385 (582)
T ss_dssp             EEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECT
T ss_pred             cccccccccccccccccccccccccccccccceeEeecccccEEeecccCCcccccccccCccccccccccccccceecc
Confidence            3333333211       1111221 1232   45567788888888888887654332110                   


Q ss_pred             ---------------------------cEEEEEEcCCCcEEEEEEC---------------------------------C
Q psy17610        296 ---------------------------MIMSAAYHPSEVQLITCST---------------------------------N  315 (515)
Q Consensus       296 ---------------------------~~~~~~~~~~~~~l~~~~~---------------------------------~  315 (515)
                                                 .-...+++|+...+++...                                 .
T Consensus       386 ~~~~~~~~~~~~~~~~~~~~P~~~gg~~w~~~a~dp~~g~~yvp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  465 (582)
T d1flga_         386 GQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHV  465 (582)
T ss_dssp             TCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCS
T ss_pred             ccccccccccccccceEEECCCccCCcccccceecCCCCceeeeccccccccccccccccccccccccCccccccccCCC
Confidence                                       0112344554444433221                                 2


Q ss_pred             CeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeeeeeccCCCCC-eeEEEECCCCc-E
Q psy17610        316 KMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPCFVGIGHAAS-ITKIKISPDKK-V  393 (515)
Q Consensus       316 ~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-i~~~~~~~~~~-~  393 (515)
                      |.+.-+|+.+++.+.+...+.  +...-.++..+.++++|+.||.++-+|.++|+.+.++.-.... -.-+.|..+|+ |
T Consensus       466 G~l~AiD~~TG~i~W~~~~~~--p~~~g~lstagglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~G~qY  543 (582)
T d1flga_         466 GSLRAMDPVSGKVVWEHKEHL--PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQY  543 (582)
T ss_dssp             EEEEEECTTTCCEEEEEEESS--CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred             CeEEEEcCCCCcEEeecCCCC--CCccceeEEcCCeEEEeCCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCEEE
Confidence            568889999999888877553  2222223345678888999999999999999999877533221 11255666775 4


Q ss_pred             EEEE
Q psy17610        394 IVSV  397 (515)
Q Consensus       394 l~~~  397 (515)
                      ++..
T Consensus       544 v~i~  547 (582)
T d1flga_         544 LGVT  547 (582)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            5443

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.05  E-value=0.0021  Score=53.06  Aligned_cols=210  Identities=7%  Similarity=-0.022  Sum_probs=131.3

Q ss_pred             cCCCcEEEEEEecCCCEEEEEe-cCceEEEEECCCCc---eeEEeeccCccCeEEEEeCCCCcEEEEEec-CCcEEEEeC
Q psy17610         79 KDDSGISSLQYNPVNNKVFVGT-VNCEIFLIDMNSGF---TLTLVNTCHTSAIYDLQFPVNFSSVFATCS-KNDIRIWSV  153 (515)
Q Consensus        79 ~~~~~v~~~~~s~~~~~l~~~~-~d~~i~iw~~~~~~---~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~  153 (515)
                      .....+.+++|++.++.|.-.. .++.|...+++...   ............+..+++.+.+..|..+.. .+.|.+.++
T Consensus        27 ~~~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~p~glAvD~~~~~lY~~d~~~~~I~v~~~  106 (266)
T d1ijqa1          27 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT  106 (266)
T ss_dssp             CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred             CCCCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCCCcceEEEeeccceEEEEecCCCEEEeEec
Confidence            3455678999999888777665 45678777765311   122233333455778888876667777655 678999999


Q ss_pred             CCCceeEEEEecCeEEEEEEEeeCCCEEEEEe--CCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEe-cCC
Q psy17610        154 RTLNELLRISVMNMICACIVFTYDGKAILSGW--NDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSG-GGE  230 (515)
Q Consensus       154 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d  230 (515)
                      +.......+.........+++.|...+|....  ..+.|.-.++......... ...-...+.+++.+.++.|..+ ...
T Consensus       107 ~g~~~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~~~~l~-~~~~~~p~gl~iD~~~~~lYw~d~~~  185 (266)
T d1ijqa1         107 KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV-TENIQWPNGITLDLLSGRLYWVDSKL  185 (266)
T ss_dssp             TSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEE-CSSCSCEEEEEEETTTTEEEEEETTT
T ss_pred             CCceEEEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCceeccc-ccccceeeEEEeeccccEEEEecCCc
Confidence            87665555555556678899999776666544  3456777777655544433 3344567899999977766655 556


Q ss_pred             CcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEE-eCCCcEEEEEcccceEEEEE
Q psy17610        231 GQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSA-STDGTCVLWDLIKSTRLIIM  291 (515)
Q Consensus       231 ~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~~  291 (515)
                      +.|...+++...................+++.  +..|+.+ ..++.|...+..+++....+
T Consensus       186 ~~I~~~~~dG~~~~~~~~~~~~~~~p~~lav~--~~~ly~td~~~~~I~~~~~~~g~~~~~~  245 (266)
T d1ijqa1         186 HSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSDVNLL  245 (266)
T ss_dssp             TEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred             CEEEEEECCCCCEEEEEeCCCcccccEEEEEE--CCEEEEEECCCCeEEEEECCCCcceEEE
Confidence            78888888644333333223223345567765  3444444 45677777777666544433

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.04  E-value=0.0022  Score=52.77  Aligned_cols=245  Identities=9%  Similarity=0.015  Sum_probs=150.3

Q ss_pred             EEEEEecCCcEEEEeCCCCc-----eeEEEEecCeEEEEEEEeeCCCEEEEEe-CCCeEEEEecCCCceEEEecCCCCCC
Q psy17610        138 SVFATCSKNDIRIWSVRTLN-----ELLRISVMNMICACIVFTYDGKAILSGW-NDGFIRCFTPQSGKLKFIIPNAHNRG  211 (515)
Q Consensus       138 ~l~~~~~d~~i~iw~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~~~~~~~~~~~~~~~~~~~  211 (515)
                      +|+.+.. +.|+-.+++...     ....+..+...+..++|.+..+.+.... .++.|...++..+.....+ ......
T Consensus         3 fLl~s~~-~~I~~~~ld~~~~~~~~~~~~~~~~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~~v~-~~~~~~   80 (263)
T d1npea_           3 HLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTII-RQDLGS   80 (263)
T ss_dssp             EEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEE-CTTCCC
T ss_pred             EEEEeCC-CeEEEEECCCccccccccccccccCCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcEEEE-Eecccc
Confidence            4444443 456666654332     1223444455678899998888777654 5678988888776655444 333456


Q ss_pred             eEEEEEcCCCCEEE-EecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCC-Cc--EEEEEcccceE
Q psy17610        212 VTALAITQDGTRLL-SGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTD-GT--CVLWDLIKSTR  287 (515)
Q Consensus       212 v~~~~~~~~~~~l~-~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~~--i~iwd~~~~~~  287 (515)
                      +..+++..-++.|. +-...+.|.+.+++......  ...........++++|...+++..... +.  |.--++.....
T Consensus        81 p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~~~~--l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~  158 (263)
T d1npea_          81 PEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRV--LFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR  158 (263)
T ss_dssp             EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE--EECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC
T ss_pred             ccEEEEeccCCeEEEeccCCCEEEEEecCCceEEE--EecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCc
Confidence            88999987555555 44566799999986433222  223334567899999988777755432 23  44445543333


Q ss_pred             EEEEEc-CccEEEEEEcCCCcEEEEEE-CCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEE
Q psy17610        288 LIIMIL-PSMIMSAAYHPSEVQLITCS-TNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWM  365 (515)
Q Consensus       288 ~~~~~~-~~~~~~~~~~~~~~~l~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d  365 (515)
                      ...... -.....+++.+.++.|+.+. ..+.|...++........+...  .....+++. ++.+..+-...+.|...|
T Consensus       159 ~~i~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~g~~~~~v~~~~--~~P~~lav~-~~~lYwtd~~~~~I~~~~  235 (263)
T d1npea_         159 RILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGL--QYPFAVTSY-GKNLYYTDWKTNSVIAMD  235 (263)
T ss_dssp             EEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECC--CSEEEEEEE-TTEEEEEETTTTEEEEEE
T ss_pred             eeeeeecccccceEEEeecCcEEEEEeCCCCEEEEEECCCCCeEEEECCC--CCcEEEEEE-CCEEEEEECCCCEEEEEE
Confidence            332222 24578999998888776664 5678999998665544334432  234577775 344555555678899999


Q ss_pred             ccCCeeeeecc-CCCCCeeEEEECC
Q psy17610        366 YREGVPCFVGI-GHAASITKIKISP  389 (515)
Q Consensus       366 ~~~~~~~~~~~-~~~~~i~~~~~~~  389 (515)
                      ..+++....+. ........++..+
T Consensus       236 ~~~g~~~~~~~~~~~~~~~gi~v~~  260 (263)
T d1npea_         236 LAISKEMDTFHPHKQTRLYGITIAL  260 (263)
T ss_dssp             TTTTEEEEEECCSSCCCCCCEEEEC
T ss_pred             CCCCccceEECCCCCCCcceEEEeC
Confidence            98888766553 2333444555543

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.00  E-value=0.0024  Score=51.91  Aligned_cols=251  Identities=9%  Similarity=0.035  Sum_probs=156.3

Q ss_pred             CCcEEEEeCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEE
Q psy17610        145 KNDIRIWSVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRL  224 (515)
Q Consensus       145 d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  224 (515)
                      ..+|.|-|+.+...+.+-.-..   .+.-.+|..+.|+.-+ ...+.++|+++.+.+...  ....+|.--.|-.+. .|
T Consensus        44 ~~~VvIidl~n~~~~~Rrpi~A---dsAIMhP~~~IiALra-g~~LQiFnletK~klks~--~~~e~VvfWkWis~~-~L  116 (327)
T d1utca2          44 QAQVVIIDMNDPSNPIRRPISA---DSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAH--TMTDDVTFWKWISLN-TV  116 (327)
T ss_dssp             EEEEEEEETTSTTSCEEEECCC---SEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEE--ECSSCCCEEEESSSS-EE
T ss_pred             CceEEEEECCCCCcceecccch---hhhhcCCCCcEEEEec-CCeEEEEehhHhhhhceE--EcCCCcEEEEecCCC-EE
Confidence            3468899998766543332111   2344678888887665 568999999999988876  345577777887544 55


Q ss_pred             EEecCCCcEEEEEccCCceeeEEeecccc----CceEEEEEecCCCEEEEEe---C----CCcEEEEEcccceEEEEEEc
Q psy17610        225 LSGGGEGQVRIWKLTRESQSLQCVLKEHT----SSVSVIQIKSDSKEAMSAS---T----DGTCVLWDLIKSTRLIIMIL  293 (515)
Q Consensus       225 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~---~----d~~i~iwd~~~~~~~~~~~~  293 (515)
                      +..+. ..|+-|+++... .+...+..|.    ..|..-..+++.++++..+   .    .|.+.+|..+...... ++.
T Consensus       117 ~lVT~-taVYHW~~~g~s-~P~k~fdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~~sQ~-ieG  193 (327)
T d1utca2         117 ALVTD-NAVYHWSMEGES-QPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQP-IEG  193 (327)
T ss_dssp             EEECS-SEEEEEESSSSC-CCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEE-ECC
T ss_pred             EEEcC-CceEEEcccCCC-CchhhhhhcccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccCcCcc-ccc
Confidence            55554 579999996433 4555555554    3566777788888877543   2    3667888876554322 222


Q ss_pred             Cc-cEEEEEEc--CCCc-EEEEE---ECCCeEEEEeCCCCc---e-----EEEEecC---CCccEEEEEEcCCCCEEEEE
Q psy17610        294 PS-MIMSAAYH--PSEV-QLITC---STNKMIDYWETCDGS---I-----IRSLEGS---DVAAVNCVDFVDDGKYFLTG  355 (515)
Q Consensus       294 ~~-~~~~~~~~--~~~~-~l~~~---~~~~~i~~~d~~~~~---~-----~~~~~~~---~~~~i~~~~~~~~~~~l~~~  355 (515)
                      +. ....+.+.  ++.. .++.+   ...+.+++.++....   .     ...+..+   ...-.-++..++.-..+..-
T Consensus       194 haa~F~~~~~~g~~~~~~lf~fa~r~~~~~kLhIiEig~~~~g~~~f~kk~vdi~fppea~~DFPvamqvs~kygiiyvi  273 (327)
T d1utca2         194 HAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLI  273 (327)
T ss_dssp             SEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSCCCTTCCCCCCEEEECCCCTTCTTCCEEEEEEETTTTEEEEE
T ss_pred             eeeeeEEEEcCCCCCCceEEEEEECCCCCcEEEEEEcCCCccCCCCCcceeEEEECCccccCCcEEEEEeeccCCEEEEE
Confidence            21 11111111  1111 22221   223688888875521   1     1112111   12345578888888889999


Q ss_pred             cCCCeEEEEEccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEE
Q psy17610        356 GADQIVKMWMYREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFL  405 (515)
Q Consensus       356 ~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i  405 (515)
                      +.-|.+++||++++.++..-+-..+.|..-+-..+..=++....+|.|..
T Consensus       274 TK~G~i~lyDleTgt~i~~nRIs~~~iF~~a~~~~~~Gi~~VNr~GqVl~  323 (327)
T d1utca2         274 TKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLS  323 (327)
T ss_dssp             ETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTSEEEE
T ss_pred             ecCcEEEEEEcccccEEEEeecCCCceEEeccCCCCceEEEECCCCeEEE
Confidence            99999999999999998887766777775555555445666667777643

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.72  E-value=0.014  Score=51.93  Aligned_cols=242  Identities=11%  Similarity=0.011  Sum_probs=129.0

Q ss_pred             EEEEEEeeCCCEEEEEe-CC----CeEEEEecCCCceEEEecCCCCCCeEEEEEcCCCCEEEEecCC-------------
Q psy17610        169 CACIVFTYDGKAILSGW-ND----GFIRCFTPQSGKLKFIIPNAHNRGVTALAITQDGTRLLSGGGE-------------  230 (515)
Q Consensus       169 v~~~~~~~~~~~l~~~~-~d----g~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------------  230 (515)
                      +...+++|++++++.+- ..    -.++++|+.+++.+.....  ......+.|.++++.|+....+             
T Consensus       127 ~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i~--~~~~~~~~W~~D~~~~~Y~~~~~~~~~~~~~~~~~  204 (430)
T d1qfma1         127 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLE--RVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETST  204 (430)
T ss_dssp             EEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEE--EECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCC
T ss_pred             ecceEecCCCCEEEEEeccccCchheeEEeccCcceecccccc--cccccceEEcCCCCEEEEEEeccccCccccccccc
Confidence            34467899999888543 23    3799999999987653311  1223568899999987754322             


Q ss_pred             ---CcEEEEEccCCceeeEEeecccc--CceEEEEEecCCCEEEEEeC---CCc--EEEEEcccce--------EEEEEE
Q psy17610        231 ---GQVRIWKLTRESQSLQCVLKEHT--SSVSVIQIKSDSKEAMSAST---DGT--CVLWDLIKST--------RLIIMI  292 (515)
Q Consensus       231 ---~~i~iw~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~---d~~--i~iwd~~~~~--------~~~~~~  292 (515)
                         ..|..+.+.+....-...+....  ..+..+..++++++++....   +..  +.+.|+....        ......
T Consensus       205 ~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  284 (430)
T d1qfma1         205 NLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLID  284 (430)
T ss_dssp             CCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEEC
T ss_pred             CCcceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeEEeeccCCccEEEEEeeCCCcccccccccceeEeec
Confidence               25777777554444333444333  34566778889998765432   233  3444443321        111111


Q ss_pred             cCccEEEEEEcCCCcEEEEEE---CCCeEEEEeCCCCce--EEEEecCCCccEEEEEEcCCCCEEEEE-cCCC--eEEEE
Q psy17610        293 LPSMIMSAAYHPSEVQLITCS---TNKMIDYWETCDGSI--IRSLEGSDVAAVNCVDFVDDGKYFLTG-GADQ--IVKMW  364 (515)
Q Consensus       293 ~~~~~~~~~~~~~~~~l~~~~---~~~~i~~~d~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg--~i~i~  364 (515)
                      ..........+.++.+++...   .++.|...++.....  ...+-.++...+..-.+...+.+|+.. ..++  .|+++
T Consensus       285 ~~~~~~~~~~~~~~~~~~~Tn~~a~~~~L~~~~~~~~~~~~w~~vi~~~~~~~~~~~~~~~~~~lvl~~~~~~~~~l~v~  364 (430)
T d1qfma1         285 NFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLH  364 (430)
T ss_dssp             SSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTBCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEE
T ss_pred             ccccceEEEecCCceeecccCcccccceeEEecCCCCccccceEEecccCcceeeeEEEEECCEEEEEEEcCCEeEEEEE
Confidence            111112222222233333322   245666666655432  233333332334333333334455544 4554  58889


Q ss_pred             EccCCeeeeeccCCCCCeeEEEECCCCcEEEEE-eC---CCcEEEEeCCCCc
Q psy17610        365 MYREGVPCFVGIGHAASITKIKISPDKKVIVSV-SA---DGGIFLWTFPELE  412 (515)
Q Consensus       365 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~---dg~i~iw~~~~~~  412 (515)
                      +..+++.........+.+..+...++...+... +.   -.++.-+|+.+.+
T Consensus       365 ~~~~~~~~~~~~~~~~sv~~~~~~~~~~~~~~~~ss~~tP~~~y~~Dl~t~~  416 (430)
T d1qfma1         365 DLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE  416 (430)
T ss_dssp             ETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred             ECCCCcEEEecCCCCceEeeccCCCCCCEEEEEEcCCCCCCeEEEEECCCCC
Confidence            998877665555555666666655655443322 21   3567888887654

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.67  E-value=0.017  Score=51.42  Aligned_cols=242  Identities=12%  Similarity=0.057  Sum_probs=133.7

Q ss_pred             cEEEEEEecCCCEEEEEec-----CceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEecC------------
Q psy17610         83 GISSLQYNPVNNKVFVGTV-----NCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSK------------  145 (515)
Q Consensus        83 ~v~~~~~s~~~~~l~~~~~-----d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d------------  145 (515)
                      .+..+++||+++++|.+-.     ...|+++|+.+++.+...+.  ......++|.+|++.++....+            
T Consensus       126 ~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i~--~~~~~~~~W~~D~~~~~Y~~~~~~~~~~~~~~~~  203 (430)
T d1qfma1         126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLE--RVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETS  203 (430)
T ss_dssp             EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEE--EECSCCEEECTTSSEEEEEECCCCSSCCSSSCCC
T ss_pred             eecceEecCCCCEEEEEeccccCchheeEEeccCcceecccccc--cccccceEEcCCCCEEEEEEeccccCcccccccc
Confidence            3456788999999987532     25699999999876654443  1223568999999988776532            


Q ss_pred             ----CcEEEEeCCCCcee--EEEEecC--eEEEEEEEeeCCCEEEEEeC---CCe--EEEEecCCCc--------eEEEe
Q psy17610        146 ----NDIRIWSVRTLNEL--LRISVMN--MICACIVFTYDGKAILSGWN---DGF--IRCFTPQSGK--------LKFII  204 (515)
Q Consensus       146 ----~~i~iw~~~~~~~~--~~~~~~~--~~v~~~~~~~~~~~l~~~~~---dg~--i~~~~~~~~~--------~~~~~  204 (515)
                          ..|..|.+.+...-  ..+....  ..+..+..++++++++....   +..  +.+.++....        .....
T Consensus       204 ~~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  283 (430)
T d1qfma1         204 TNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLI  283 (430)
T ss_dssp             CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEE
T ss_pred             cCCcceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeEEeeccCCccEEEEEeeCCCcccccccccceeEee
Confidence                25778887765432  3333322  23566778889998775432   223  3444443221        11122


Q ss_pred             cCCCCCCeEEEEEcCCCCEEEEec---CCCcEEEEEccCCcee-eEEeeccccCceEEEEEecCCCEEEEEe-CCC--cE
Q psy17610        205 PNAHNRGVTALAITQDGTRLLSGG---GEGQVRIWKLTRESQS-LQCVLKEHTSSVSVIQIKSDSKEAMSAS-TDG--TC  277 (515)
Q Consensus       205 ~~~~~~~v~~~~~~~~~~~l~~~~---~d~~i~iw~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~--~i  277 (515)
                       .........+.. .++.+++...   .++.|...++...... ....+..+...+..-.+...+.+|+... .++  .|
T Consensus       284 -~~~~~~~~~~~~-~~~~~~~~Tn~~a~~~~L~~~~~~~~~~~~w~~vi~~~~~~~~~~~~~~~~~~lvl~~~~~~~~~l  361 (430)
T d1qfma1         284 -DNFEGEYDYVTN-EGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTL  361 (430)
T ss_dssp             -CSSSSCEEEEEE-ETTEEEEEECTTCTTCEEEEEETTBCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEE
T ss_pred             -cccccceEEEec-CCceeecccCcccccceeEEecCCCCccccceEEecccCcceeeeEEEEECCEEEEEEEcCCEeEE
Confidence             222233332222 2233333322   3466666676543322 2333444555454444445555665544 443  58


Q ss_pred             EEEEcccceEEEEEEcCc-cEEEEEEcCCCcEEEEEEC----CCeEEEEeCCCCce
Q psy17610        278 VLWDLIKSTRLIIMILPS-MIMSAAYHPSEVQLITCST----NKMIDYWETCDGSI  328 (515)
Q Consensus       278 ~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~----~~~i~~~d~~~~~~  328 (515)
                      +++++..+........+. .+..+...++...+.....    -.++.-+|+.+++.
T Consensus       362 ~v~~~~~~~~~~~~~~~~~sv~~~~~~~~~~~~~~~~ss~~tP~~~y~~Dl~t~~~  417 (430)
T d1qfma1         362 QLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEEL  417 (430)
T ss_dssp             EEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSSC
T ss_pred             EEEECCCCcEEEecCCCCceEeeccCCCCCCEEEEEEcCCCCCCeEEEEECCCCCc
Confidence            889998877655543332 3444444455544443322    36788888888753

>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Thermostable phytase (3-phytase)
family: Thermostable phytase (3-phytase)
domain: Thermostable phytase (3-phytase)
species: Bacillus amyloliquefaciens [TaxId: 1390]

Probab=97.17  E-value=0.054  Score=45.85  Aligned_cols=193  Identities=11%  Similarity=0.160  Sum_probs=115.9

Q ss_pred             CCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEEEEc------CCCCEEEEecC--C--CcEEEEEccCCceeeE
Q psy17610        177 DGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTALAIT------QDGTRLLSGGG--E--GQVRIWKLTRESQSLQ  246 (515)
Q Consensus       177 ~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~------~~~~~l~~~~~--d--~~i~iw~~~~~~~~~~  246 (515)
                      +..+++.....+-|.+||++ |+.+..+.   .+.++.+..-      ....-+++++.  +  ..|.+|.+........
T Consensus        39 ~~SlI~gTdK~~Gl~vYdL~-G~~l~~~~---~Gr~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~id~~~~~l~  114 (353)
T d1h6la_          39 QNSKLITTNKKSGLAVYSLE-GKMLHSYH---TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQ  114 (353)
T ss_dssp             GGCEEEEEETTSCCEEEETT-CCEEEECC---SSCEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEETTTTEEE
T ss_pred             CccEEEEEcCcCCEEEEcCC-CcEEEecc---cCCcCccccccccccCCcceEEEEEeCCcCcceeEEEEEecCcccccc
Confidence            45566666677679999986 77766653   2445544432      22223455542  2  3578888753332221


Q ss_pred             Eeecc-------ccCceEEEEE--ecC-CC-EEEEEeCCCcEEEEEccc-------ceEEEEEEcCccEEEEEEcCCCcE
Q psy17610        247 CVLKE-------HTSSVSVIQI--KSD-SK-EAMSASTDGTCVLWDLIK-------STRLIIMILPSMIMSAAYHPSEVQ  308 (515)
Q Consensus       247 ~~~~~-------~~~~v~~~~~--~~~-~~-~l~~~~~d~~i~iwd~~~-------~~~~~~~~~~~~~~~~~~~~~~~~  308 (515)
                       .+..       ....+..+|+  ++. +. +++....+|.+..|.+..       .+.++.+..+..+..|.+.+....
T Consensus       115 -~~~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f~~~~q~EGCVvDde~~~  193 (353)
T d1h6la_         115 -SITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAFKMNSQTEGMAADDEYGS  193 (353)
T ss_dssp             -ECSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEEECSSCEEEEEEETTTTE
T ss_pred             -cccccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeeccCCCCccceEEEeCCCCc
Confidence             1211       1124666776  554 44 456677789998887632       356677888899999999999999


Q ss_pred             EEEEECCCeEEEEeCCCC-----ceEEEEec-CCCccEEEEEEcC--C--CCEEEEEcCCCeEEEEEccCC-eeeee
Q psy17610        309 LITCSTNKMIDYWETCDG-----SIIRSLEG-SDVAAVNCVDFVD--D--GKYFLTGGADQIVKMWMYREG-VPCFV  374 (515)
Q Consensus       309 l~~~~~~~~i~~~d~~~~-----~~~~~~~~-~~~~~i~~~~~~~--~--~~~l~~~~~dg~i~i~d~~~~-~~~~~  374 (515)
                      |+.+-++..+..++....     ..+....+ +-...+..++.-.  +  |-+|++.-.+++..+||.... +.+..
T Consensus       194 LyisEE~~Giw~~~a~~~~~~~~~~i~~~~g~~l~~D~EGlaiy~~~~~~GylivSsQG~n~f~vydr~~~~~~~g~  270 (353)
T d1h6la_         194 LYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTPDIEGLTIYYAADGKGYLLASSQGNSSYAIYERQGQNKYVAD  270 (353)
T ss_dssp             EEEEETTTEEEEEESSTTSCSCCEEEEECSSSSCCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEE
T ss_pred             EEEecCccceEEEEeccCCCccceeeecccCccccCCccccEEEEcCCCCeEEEEEcCCCCeEEEEecCCCccccce
Confidence            999999888877775421     22222222 1224566666432  2  334444445788999998763 44433

>d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Acylamino-acid-releasing enzyme, N-terminal donain
domain: Acylamino-acid-releasing enzyme, N-terminal donain
species: Aeropyrum pernix [TaxId: 56636]

Probab=97.15  E-value=0.029  Score=42.55  Aligned_cols=224  Identities=14%  Similarity=0.082  Sum_probs=114.8

Q ss_pred             CCceEEEecCCCCeEEEEcCCCCCCcccccccceEEeec--cccccc-cccccccccccCcceeeeccceEEEEEecC-C
Q psy17610          6 NDEFAYCGTTSGDILKLNLNYPSDLSKVESDTAAVLMGC--YGKLIK-KKVSTKLKDVNAEDVSLYSAGVTALYLLKD-D   81 (515)
Q Consensus         6 ~~~~~~~g~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~   81 (515)
                      ++..++++++.|.+-++-+...+........-....-..  ..+++. ++..+..+.-..-..++ .+.-+...+..- .
T Consensus        25 ~d~ll~~~~seG~vni~~l~g~~~vkLtkePI~~~~~Pk~~ldfi~f~RDV~kGkE~Hai~~~Nl-k~~GEE~~i~spk~  103 (313)
T d2hu7a1          25 GDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVGRVILVRDVSKGAEQHALFKVNT-SRPGEEQRLEAVKP  103 (313)
T ss_dssp             TTEEEEEEEETTEEEEEEESSSSCEECCSSCCSEECEECTTBSEEEEEEECSTTSCCEEEEEEET-TSTTCEEECTTSCS
T ss_pred             CCcEEEEEeccceEEEEEEeCCEEEEEecccccCcCCCccCcceEEEEeehhcCcceeeEEEEcc-CCCCeeeEecCCce
Confidence            556899999999999998888776655554422222221  111211 11111111100000000 100112222222 2


Q ss_pred             CcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCCCcEEEEEec--CC--cEEEEeCCCCc
Q psy17610         82 SGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVNFSSVFATCS--KN--DIRIWSVRTLN  157 (515)
Q Consensus        82 ~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~--d~--~i~iw~~~~~~  157 (515)
                      -.|.++++. +.+...+|+......+|-++.|.......-..-+-|+.+.    +++++-.+-  .+  ...+=|+.+| 
T Consensus       104 vRI~S~~yd-dk~vvF~Gased~~~LYviegGklrkL~~vPpFsFVtDI~----~d~I~G~g~~~g~~~sfF~adl~SG-  177 (313)
T d2hu7a1         104 MRILSGVDT-GEAVVFTGATEDRVALYALDGGGLRELARLPGFGFVSDIR----GDLIAGLGFFGGGRVSLFTSNLSSG-  177 (313)
T ss_dssp             BEEEEEEEC-SSCEEEEEECSSCEEEEEEETTEEEEEEEESSCEEEEEEE----TTEEEEEEEEETTEEEEEEEETTTE-
T ss_pred             EEEEEeeec-CceEEEecccCCceEEEEEeCCceeeeccCCCcceEEecc----CCeEEEEeeecCCcceEEEEecccC-
Confidence            466777765 5667778888888999999887543333222333444443    222222111  11  1222233332 


Q ss_pred             eeEEEEecCeEEEEEEEeeCCCEEEEEeC----CCeEEEEecCCCceEEEecCC------CCCCeEEEEEcCCCCEEEEe
Q psy17610        158 ELLRISVMNMICACIVFTYDGKAILSGWN----DGFIRCFTPQSGKLKFIIPNA------HNRGVTALAITQDGTRLLSG  227 (515)
Q Consensus       158 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----dg~i~~~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~~~  227 (515)
                      .++.+...++.++.....++.+. ++...    .--| -+|+++++....-...      ..-.|+-+-+.|++++++.+
T Consensus       178 ~lri~tpkeGS~~~ay~~~gnKV-~sdyEt~gEsywi-t~D~~s~~yerve~P~kd~~sy~p~~I~~~~Y~Pdd~L~iia  255 (313)
T d2hu7a1         178 GLRVFDSGEGSFSSASISPGMKV-TAGLETAREARLV-TVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVA  255 (313)
T ss_dssp             EEEEECCSSEEEEEEEECTTSCE-EEEEEESSCEEEE-EECTTTCCEEECCCSSCHHHHHCCSEEEEEEECTTSCEEEEE
T ss_pred             CEEEecCCCCcccceeEccCcee-eeccCCCCceEEE-EEecccCceeeeecCcccceeecceEEEeeeeCCCCcEEEEE
Confidence            23334444555566666665553 43322    1223 4588777654432111      23456677799999998999


Q ss_pred             cCCCcEEEEEc
Q psy17610        228 GGEGQVRIWKL  238 (515)
Q Consensus       228 ~~d~~i~iw~~  238 (515)
                      -.||.-++|.-
T Consensus       256 krdG~s~lF~n  266 (313)
T d2hu7a1         256 RREGRSAVFID  266 (313)
T ss_dssp             EETTEEEEEET
T ss_pred             ecCCchheeec
Confidence            99999999973

>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: Serum paraoxonase/arylesterase 1, PON1
domain: Serum paraoxonase/arylesterase 1, PON1
species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=97.07  E-value=0.03  Score=47.66  Aligned_cols=185  Identities=9%  Similarity=0.010  Sum_probs=98.5

Q ss_pred             EEEEecCCCEEEEEec------------CceEEEEECCCCceeEEeeccCc-------cCeEEEEe--CCCCcE-EEEEe
Q psy17610         86 SLQYNPVNNKVFVGTV------------NCEIFLIDMNSGFTLTLVNTCHT-------SAIYDLQF--PVNFSS-VFATC  143 (515)
Q Consensus        86 ~~~~s~~~~~l~~~~~------------d~~i~iw~~~~~~~~~~~~~~h~-------~~v~~~~~--~~~~~~-l~~~~  143 (515)
                      .++..|+|..+++++.            .|.|.++|+++.......+.-..       -.-..+..  .++++. |++..
T Consensus        39 Di~~~~dg~~~issg~~~~~~~~~~~~~~G~i~~~dl~~~~~~~~~l~~~~~~~~~~~f~PhGi~l~~~~dg~~~L~vvn  118 (340)
T d1v04a_          39 DLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVN  118 (340)
T ss_dssp             EEEECTTSEEEEEECCCC--------CCCCEEEEEETTSSSCCEEECEEECSSSCGGGCCEEEEEEEECTTCCEEEEEEE
T ss_pred             eEEECCCCcEEEEecCccCCCCCCCCCCCCeEEEEecCCCCCcceEEEecCCCCCCcceeccceeEEEcCCCcEEEEEEe
Confidence            5777888876665431            48999999986433222221111       11233333  455654 34432


Q ss_pred             ---cCCcEEEEeCCCCceeEE----EEec-CeEEEEEEEeeCCCEEEEEeC---------------CCeEEEEecCCCce
Q psy17610        144 ---SKNDIRIWSVRTLNELLR----ISVM-NMICACIVFTYDGKAILSGWN---------------DGFIRCFTPQSGKL  200 (515)
Q Consensus       144 ---~d~~i~iw~~~~~~~~~~----~~~~-~~~v~~~~~~~~~~~l~~~~~---------------dg~i~~~~~~~~~~  200 (515)
                         ...+|.++++........    +... ......+++..++..+++-..               -+...+|..+.++.
T Consensus       119 H~~~~~~ieif~~~~~~~~l~~~~~v~~~~~~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~~~~~~~~  198 (340)
T d1v04a_         119 HPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDV  198 (340)
T ss_dssp             CSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCCSHHHHHHHHHTTCCCEEEEEECSSCE
T ss_pred             ccCCCceeEEEEEeCCCCeEEEEeecCCccccCccceEEecCCCEEEecCccCcChhhhhhhHhhcCCceeEEEEcCCce
Confidence               356788888764432111    1111 123678888888887776311               12233444344443


Q ss_pred             EEEecCCCCCCeEEEEEcCCCCEEEEe-cCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEe
Q psy17610        201 KFIIPNAHNRGVTALAITQDGTRLLSG-GGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAS  272 (515)
Q Consensus       201 ~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  272 (515)
                      ....  ..-...+.++++|++++|+++ +..+.|+.|++.............-....-.+.+.+++..+..++
T Consensus       199 ~~~~--~~l~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~~~l~~~~~~~l~~~pDNi~~d~~~g~lwva~  269 (340)
T d1v04a_         199 RVVA--EGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGC  269 (340)
T ss_dssp             EEEE--EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEE
T ss_pred             EEEc--CCCCccceeEECCCCCEEEEEeCCCCeEEEEEeCCCcccceEEEecCCCCCCccEEecCCCEEEEEE
Confidence            2222  233567899999999877655 566889999986433211111112234455666765444444444

>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Thermostable phytase (3-phytase)
family: Thermostable phytase (3-phytase)
domain: Thermostable phytase (3-phytase)
species: Bacillus amyloliquefaciens [TaxId: 1390]

Probab=96.83  E-value=0.11  Score=43.90  Aligned_cols=191  Identities=14%  Similarity=0.204  Sum_probs=108.7

Q ss_pred             CCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEc------CCCCEEEEEcC--C--CeEEEEEccC-Ceee
Q psy17610        304 PSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFV------DDGKYFLTGGA--D--QIVKMWMYRE-GVPC  372 (515)
Q Consensus       304 ~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~------~~~~~l~~~~~--d--g~i~i~d~~~-~~~~  372 (515)
                      |+..+++.....+-|++||+ .|+.+..+..   +.++.+..-      ....-+++++.  +  ..|.+|.+.. ...+
T Consensus        38 p~~SlI~gTdK~~Gl~vYdL-~G~~l~~~~~---Gr~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~id~~~~~l  113 (353)
T d1h6la_          38 PQNSKLITTNKKSGLAVYSL-EGKMLHSYHT---GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTL  113 (353)
T ss_dssp             GGGCEEEEEETTSCCEEEET-TCCEEEECCS---SCEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEETTTTEE
T ss_pred             cCccEEEEEcCcCCEEEEcC-CCcEEEeccc---CCcCccccccccccCCcceEEEEEeCCcCcceeEEEEEecCccccc
Confidence            45567777777778999998 4777777654   344444433      22223445442  2  3688887753 2223


Q ss_pred             eeccCC-------CCCeeEEEE--CCC-Cc-EEEEEeCCCcEEEEeCCCCcCccCCCcccceeeecccccccceeeecCc
Q psy17610        373 FVGIGH-------AASITKIKI--SPD-KK-VIVSVSADGGIFLWTFPELEDDVGDSRSLSSKISRSTARSTRLIIMILP  441 (515)
Q Consensus       373 ~~~~~~-------~~~i~~~~~--~~~-~~-~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  441 (515)
                      ..+...       ...+..+++  ++. +. ++++...+|.+..|.+.......     ...         ........+
T Consensus       114 ~~~~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~-----v~~---------~lvr~f~~~  179 (353)
T d1h6la_         114 QSITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGY-----ISG---------KKVRAFKMN  179 (353)
T ss_dssp             EECSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSS-----EEE---------EEEEEEECS
T ss_pred             ccccccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCc-----eee---------EeeeccCCC
Confidence            322211       124667776  664 43 56667778999998774322100     000         011112234


Q ss_pred             ccEEEeeeccCCcEEEEeecCCeEEEEecC-----CCeeeeeecc-cccceEEEEEEc--CCCc-EEEEee-cCCeEEEE
Q psy17610        442 SMIMSAAYHPSEVQLITCSTNKMIDYWETC-----DGSIIRSLEG-SDVAAVNCVDFV--DDGK-YFLTGG-ADQIVKIC  511 (515)
Q Consensus       442 ~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~-----~~~~~~~~~~-~~~~~v~~~~~s--~~~~-~l~s~~-~dg~v~iw  511 (515)
                      ..+..|.+.+....|..+-++..|+.++..     .+..+....+ +-...+..|+.-  ++++ +|++++ .|++..||
T Consensus       180 ~q~EGCVvDde~~~LyisEE~~Giw~~~a~~~~~~~~~~i~~~~g~~l~~D~EGlaiy~~~~~~GylivSsQG~n~f~vy  259 (353)
T d1h6la_         180 SQTEGMAADDEYGSLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTPDIEGLTIYYAADGKGYLLASSQGNSSYAIY  259 (353)
T ss_dssp             SCEEEEEEETTTTEEEEEETTTEEEEEESSTTSCSCCEEEEECSSSSCCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEE
T ss_pred             CccceEEEeCCCCcEEEecCccceEEEEeccCCCccceeeecccCccccCCccccEEEEcCCCCeEEEEEcCCCCeEEEE
Confidence            568899999999999999888777777653     1233333322 223566777653  3333 554444 57788888


Q ss_pred             E
Q psy17610        512 L  512 (515)
Q Consensus       512 ~  512 (515)
                      |
T Consensus       260 d  260 (353)
T d1h6la_         260 E  260 (353)
T ss_dssp             E
T ss_pred             e
Confidence            6

>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nucleoporin domain
family: Nucleoporin domain
domain: Nucleoporin NUP159
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.01  E-value=0.38  Score=41.00  Aligned_cols=178  Identities=8%  Similarity=0.020  Sum_probs=103.5

Q ss_pred             CcEEEEEEecCCCEEEEEecCceEEEEECCC----------CceeEEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEE
Q psy17610         82 SGISSLQYNPVNNKVFVGTVNCEIFLIDMNS----------GFTLTLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIW  151 (515)
Q Consensus        82 ~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~----------~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw  151 (515)
                      ....-++.++...++++|+.++ +.|...+.          +.......  .-..|..++|+.+  .+++ ..++.+..+
T Consensus        37 ~~~~LLAVsn~~GLl~aa~~~~-l~V~~t~~l~~~~~~~~~~~~~~~~~--~ip~v~~vafs~d--~l~v-~~~~~l~~~  110 (381)
T d1xipa_          37 ASLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK--EIPDVIFVCFHGD--QVLV-STRNALYSL  110 (381)
T ss_dssp             SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE--ECTTEEEEEEETT--EEEE-EESSEEEEE
T ss_pred             cccceEEEeCCCCEEEEECCCE-EEEEEHHHHHHHhhccCCCCcceecc--CCCCeEEEEeeCC--EEEE-EeCCCEEEE
Confidence            4466789999888888888774 66766421          11111111  1135899999865  4444 455678888


Q ss_pred             eCCCCceeEEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEec----CCCCCCeEEEEEcCCCCEEEEe
Q psy17610        152 SVRTLNELLRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIP----NAHNRGVTALAITQDGTRLLSG  227 (515)
Q Consensus       152 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~  227 (515)
                      +..+-...........++..+.+.|.  .++....++.+.++++..++......    ..-...+.+++|++.|..++++
T Consensus       111 ~~~~l~~~~~~~~~~~~~~~~~~~p~--~~~l~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~ws~kgkq~v~~  188 (381)
T d1xipa_         111 DLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQLAQNVTSFDVTNSQLAVLLKDRSFQSFAW  188 (381)
T ss_dssp             ESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEEEEESEEEEEECSSEEEEEETTSCEEEEEE
T ss_pred             EeeccccccccccccccccceecCCc--eeEEEecCCCEEEEEeccCccccccCCcceEEecCCceEEEEeCCcEEEEEe
Confidence            88776555555555666777777664  57777788999999998876533221    0123557777887777777766


Q ss_pred             cCCCcEEEE-EccCCceeeEEeeccccCceEEEEEecCCCEEEE
Q psy17610        228 GGEGQVRIW-KLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMS  270 (515)
Q Consensus       228 ~~d~~i~iw-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  270 (515)
                      ..++ ..+- ++.  ..............+.++.|-.+..++++
T Consensus       189 ~g~~-~q~k~~i~--~~~~~~~p~~~~~~v~sI~WL~~~~F~vv  229 (381)
T d1xipa_         189 RNGE-MEKQFEFS--LPSELEELPVEEYSPLSVTILSPQDFLAV  229 (381)
T ss_dssp             ETTE-EEEEEEEC--CCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred             CCCc-eeeccCCC--CccccCCCcCCCcceeEEEEecCceEEEE
Confidence            3321 1111 111  00000000112345778888766555443

>d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Acylamino-acid-releasing enzyme, N-terminal donain
domain: Acylamino-acid-releasing enzyme, N-terminal donain
species: Aeropyrum pernix [TaxId: 56636]

Probab=95.73  E-value=0.27  Score=37.21  Aligned_cols=218  Identities=15%  Similarity=0.129  Sum_probs=112.9

Q ss_pred             CCCEEEEEecCceEEEEECCCCceeEEeeccCccCeEEEEeCCC-CcEEEEEec------CCcEEEEeCCCCceeEEEEe
Q psy17610         92 VNNKVFVGTVNCEIFLIDMNSGFTLTLVNTCHTSAIYDLQFPVN-FSSVFATCS------KNDIRIWSVRTLNELLRISV  164 (515)
Q Consensus        92 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~~~~~------d~~i~iw~~~~~~~~~~~~~  164 (515)
                      +.++|+++...|.+.++-+..++.....    ..+|....--.. -.++..+-.      ...+.+-|+....+..++..
T Consensus        25 ~d~ll~~~~seG~vni~~l~g~~~vkLt----kePI~~~~~Pk~~ldfi~f~RDV~kGkE~Hai~~~Nlk~~GEE~~i~s  100 (313)
T d2hu7a1          25 GDKLLVVGFSEGSVNAYLYDGGETVKLN----REPINSVLDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEEQRLEA  100 (313)
T ss_dssp             TTEEEEEEEETTEEEEEEESSSSCEECC----SSCCSEECEECTTBSEEEEEEECSTTSCCEEEEEEETTSTTCEEECTT
T ss_pred             CCcEEEEEeccceEEEEEEeCCEEEEEe----cccccCcCCCccCcceEEEEeehhcCcceeeEEEEccCCCCeeeEecC
Confidence            3457888889999999998886554432    334433322111 112222111      11233334432222222322


Q ss_pred             cC-eEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCceEEEecCCCCCCeEEE--------EEc-CCCCEEEEecC-CCcE
Q psy17610        165 MN-MICACIVFTYDGKAILSGWNDGFIRCFTPQSGKLKFIIPNAHNRGVTAL--------AIT-QDGTRLLSGGG-EGQV  233 (515)
Q Consensus       165 ~~-~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~v~~~--------~~~-~~~~~l~~~~~-d~~i  233 (515)
                      .. -.|.++++. +.+..++|+......+|-++.|+.......+.-+-|+.+        .+- +...-++++.- .|.+
T Consensus       101 pk~vRI~S~~yd-dk~vvF~Gased~~~LYviegGklrkL~~vPpFsFVtDI~~d~I~G~g~~~g~~~sfF~adl~SG~l  179 (313)
T d2hu7a1         101 VKPMRILSGVDT-GEAVVFTGATEDRVALYALDGGGLRELARLPGFGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGL  179 (313)
T ss_dssp             SCSBEEEEEEEC-SSCEEEEEECSSCEEEEEEETTEEEEEEEESSCEEEEEEETTEEEEEEEEETTEEEEEEEETTTEEE
T ss_pred             CceEEEEEeeec-CceEEEecccCCceEEEEEeCCceeeeccCCCcceEEeccCCeEEEEeeecCCcceEEEEecccCCE
Confidence            22 345555553 345666888888899999988876544322222233332        221 12122333333 4555


Q ss_pred             EEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeC---CCcEEEEEcccceEEEEEE--------cCccEEEEEE
Q psy17610        234 RIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSAST---DGTCVLWDLIKSTRLIIMI--------LPSMIMSAAY  302 (515)
Q Consensus       234 ~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~iwd~~~~~~~~~~~--------~~~~~~~~~~  302 (515)
                      ++++.             ..+.++.....+..+. ++.-+   +....-+|+++++....-.        .+..+.-+-+
T Consensus       180 ri~tp-------------keGS~~~ay~~~gnKV-~sdyEt~gEsywit~D~~s~~yerve~P~kd~~sy~p~~I~~~~Y  245 (313)
T d2hu7a1         180 RVFDS-------------GEGSFSSASISPGMKV-TAGLETAREARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGY  245 (313)
T ss_dssp             EEECC-------------SSEEEEEEEECTTSCE-EEEEEESSCEEEEEECTTTCCEEECCCSSCHHHHHCCSEEEEEEE
T ss_pred             EEecC-------------CCCcccceeEccCcee-eeccCCCCceEEEEEecccCceeeeecCcccceeecceEEEeeee
Confidence            55554             3344444445554443 33222   1222245776655433221        1234667779


Q ss_pred             cCCCcEEEEEECCCeEEEEeCCCCceEE
Q psy17610        303 HPSEVQLITCSTNKMIDYWETCDGSIIR  330 (515)
Q Consensus       303 ~~~~~~l~~~~~~~~i~~~d~~~~~~~~  330 (515)
                      .|+++.++.+-.||.-.+|.  +|+.+.
T Consensus       246 ~Pdd~L~iiakrdG~s~lF~--nGk~in  271 (313)
T d2hu7a1         246 LPDGRLAVVARREGRSAVFI--DGERVE  271 (313)
T ss_dssp             CTTSCEEEEEEETTEEEEEE--TTEEEC
T ss_pred             CCCCcEEEEEecCCchheee--cceEec
Confidence            99999999999999988887  455443

>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Kelch motif
family: Kelch motif
domain: Kelch-like ECH-associated protein 1, KEAP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.21  E-value=0.41  Score=39.08  Aligned_cols=215  Identities=10%  Similarity=0.091  Sum_probs=96.7

Q ss_pred             eEEEEecCCCceEEEecCCC-CCCeEEEEEcCCCCEEEEecCC---------CcEEEEEccCCceeeEEeeccccCceEE
Q psy17610        189 FIRCFTPQSGKLKFIIPNAH-NRGVTALAITQDGTRLLSGGGE---------GQVRIWKLTRESQSLQCVLKEHTSSVSV  258 (515)
Q Consensus       189 ~i~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d---------~~i~iw~~~~~~~~~~~~~~~~~~~v~~  258 (515)
                      .+.+||+++++....-..+. ...-..+..  +++.++.|+..         ..+.+||...........+......-.+
T Consensus        20 ~~~~yd~~t~~W~~~~~~p~~R~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~w~~~~~~p~~r~~~~~   97 (288)
T d1zgka1          20 YLEAYNPSNGTWLRLADLQVPRSGLAGCVV--GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGV   97 (288)
T ss_dssp             CEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEE
T ss_pred             eEEEEECCCCeEEECCCCCCccceeEEEEE--CCEEEEEeCcccCCCCccccchhhhcccccccccccccccceecceec
Confidence            57889998876544321111 111122222  45666666531         3567788765544433322211111112


Q ss_pred             EEEecCCCEEEEEeCCCc-----EEEEEcccceEEEEEEcCcc--EEEEEEcCCCcEEEEEECC-----CeEEEEeCCCC
Q psy17610        259 IQIKSDSKEAMSASTDGT-----CVLWDLIKSTRLIIMILPSM--IMSAAYHPSEVQLITCSTN-----KMIDYWETCDG  326 (515)
Q Consensus       259 ~~~~~~~~~l~~~~~d~~-----i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~-----~~i~~~d~~~~  326 (515)
                      .  ..+++.++.++.++.     ...+|..+..-......+..  -..+... ++..++.++.+     ..+..||..+.
T Consensus        98 ~--~~~~~i~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~~~GG~~~~~~~~~~~~~d~~~~  174 (288)
T d1zgka1          98 G--VIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL-NRLLYAVGGFDGTNRLNSAECYYPERN  174 (288)
T ss_dssp             E--EETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTTT
T ss_pred             c--ccceeeEEecceecccccceeeeeccccCccccccccccccccceeeee-eecceEecCcccccccceEEEeecccc
Confidence            2  225555555544333     44466655543322222211  1112222 34444444432     34677887765


Q ss_pred             ceEEEEecCCCccEEEEEEcCCCCEEEEEcCC-----CeEEEEEccCCeeeeeccCCCCCe-eEEEECCCCcEEEEEeCC
Q psy17610        327 SIIRSLEGSDVAAVNCVDFVDDGKYFLTGGAD-----QIVKMWMYREGVPCFVGIGHAASI-TKIKISPDKKVIVSVSAD  400 (515)
Q Consensus       327 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~i-~~~~~~~~~~~l~~~~~d  400 (515)
                      +....-.........+... .++++++.|+.+     .....+|..+.+....-....... .+++. .++++++.|+.+
T Consensus       175 ~~~~~~~~~~~~~~~~~~~-~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~-~~~~l~v~GG~~  252 (288)
T d1zgka1         175 EWRMITAMNTIRSGAGVCV-LHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITV-HQGRIYVLGGYD  252 (288)
T ss_dssp             EEEECCCCSSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBC
T ss_pred             ccccccccccccccccccc-eeeeEEEecCccccccccceeeeeecceeeecccCccCcccceEEEE-ECCEEEEEecCC
Confidence            4432222111111112222 245666666544     346677776654433221111111 12222 367777777654


Q ss_pred             C-----cEEEEeCCC
Q psy17610        401 G-----GIFLWTFPE  410 (515)
Q Consensus       401 g-----~i~iw~~~~  410 (515)
                      +     .+.+||+..
T Consensus       253 ~~~~~~~v~~yd~~~  267 (288)
T d1zgka1         253 GHTFLDSVECYDPDT  267 (288)
T ss_dssp             SSCBCCEEEEEETTT
T ss_pred             CCeecceEEEEECCC
Confidence            4     367777765

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=94.61  E-value=1.3  Score=38.84  Aligned_cols=53  Identities=15%  Similarity=0.110  Sum_probs=38.7

Q ss_pred             ccEEEEEEcCCCCEEEEEcCCCeEEEEEccCCeee--eec------cCCCCCeeEEEECCC
Q psy17610        338 AAVNCVDFVDDGKYFLTGGADQIVKMWMYREGVPC--FVG------IGHAASITKIKISPD  390 (515)
Q Consensus       338 ~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~--~~~------~~~~~~i~~~~~~~~  390 (515)
                      ...++|+|.|+|++|++--..|.|++++..+++..  ..+      ..-+.....|+|+|+
T Consensus        27 ~~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pd   87 (450)
T d1crua_          27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD   87 (450)
T ss_dssp             SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred             CCceEEEEeCCCeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCC
Confidence            56789999999998888766799999987776432  221      122356788999995

>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Kelch motif
family: Kelch motif
domain: Kelch-like ECH-associated protein 1, KEAP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.13  E-value=1  Score=36.54  Aligned_cols=216  Identities=11%  Similarity=0.107  Sum_probs=95.7

Q ss_pred             CcEEEEeCCCCceeE--EEEecCeEEEEEEEeeCCCEEEEEeC---------CCeEEEEecCCCceEEEecCCCC-CCeE
Q psy17610        146 NDIRIWSVRTLNELL--RISVMNMICACIVFTYDGKAILSGWN---------DGFIRCFTPQSGKLKFIIPNAHN-RGVT  213 (515)
Q Consensus       146 ~~i~iw~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~---------dg~i~~~~~~~~~~~~~~~~~~~-~~v~  213 (515)
                      ..+.+||+++++-..  .+...... .++ ..-+++.++.|+.         ...+.+||..+.+....-..... ..-.
T Consensus        19 ~~~~~yd~~t~~W~~~~~~p~~R~~-~~~-~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~w~~~~~~p~~r~~~~   96 (288)
T d1zgka1          19 SYLEAYNPSNGTWLRLADLQVPRSG-LAG-CVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIG   96 (288)
T ss_dssp             CCEEEEETTTTEEEECCCCSSCCBS-CEE-EEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCE
T ss_pred             ceEEEEECCCCeEEECCCCCCccce-eEE-EEECCEEEEEeCcccCCCCccccchhhhcccccccccccccccceeccee
Confidence            357889988764222  11111111 111 1224555555542         23577888877665432211111 1112


Q ss_pred             EEEEcCCCCEEEEecCCCc-----EEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCC-----CcEEEEEcc
Q psy17610        214 ALAITQDGTRLLSGGGEGQ-----VRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTD-----GTCVLWDLI  283 (515)
Q Consensus       214 ~~~~~~~~~~l~~~~~d~~-----i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~  283 (515)
                      +..+  +++.++.++.++.     ...++.................. ...... ++..++.++.+     ..+..||..
T Consensus        97 ~~~~--~~~i~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~-~~~~~~-~~~~~~~GG~~~~~~~~~~~~~d~~  172 (288)
T d1zgka1          97 VGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIG-VGVAVL-NRLLYAVGGFDGTNRLNSAECYYPE  172 (288)
T ss_dssp             EEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBS-CEEEEE-TTEEEEECCBCSSCBCCCEEEEETT
T ss_pred             cccc--ceeeEEecceecccccceeeeeccccCcccccccccccccc-ceeeee-eecceEecCcccccccceEEEeecc
Confidence            2222  5666666654443     34455543322221111111111 112222 34455555443     357778877


Q ss_pred             cceEEEEEEcCcc--EEEEEEcCCCcEEEEEECC-----CeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEc
Q psy17610        284 KSTRLIIMILPSM--IMSAAYHPSEVQLITCSTN-----KMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGG  356 (515)
Q Consensus       284 ~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~-----~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~  356 (515)
                      +.+.......+..  ..+... ..+..++.++.+     .....+|..+.+....-..+....-.+++. .++++++.|+
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~-~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~-~~~~l~v~GG  250 (288)
T d1zgka1         173 RNEWRMITAMNTIRSGAGVCV-LHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITV-HQGRIYVLGG  250 (288)
T ss_dssp             TTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECC
T ss_pred             ccccccccccccccccccccc-eeeeEEEecCccccccccceeeeeecceeeecccCccCcccceEEEE-ECCEEEEEec
Confidence            6654433222211  112222 234455554433     346677776655433222222111112222 3678888887


Q ss_pred             CCC-----eEEEEEccCC
Q psy17610        357 ADQ-----IVKMWMYREG  369 (515)
Q Consensus       357 ~dg-----~i~i~d~~~~  369 (515)
                      .++     .+.+||+.+.
T Consensus       251 ~~~~~~~~~v~~yd~~~~  268 (288)
T d1zgka1         251 YDGHTFLDSVECYDPDTD  268 (288)
T ss_dssp             BCSSCBCCEEEEEETTTT
T ss_pred             CCCCeecceEEEEECCCC
Confidence            543     3778888765

>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nucleoporin domain
family: Nucleoporin domain
domain: Nucleoporin NUP159
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.94  E-value=1.6  Score=37.06  Aligned_cols=180  Identities=8%  Similarity=0.024  Sum_probs=102.6

Q ss_pred             CCeEEEEEcCCCCEEEEecCCCcEEEEEccC---------CceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEE
Q psy17610        210 RGVTALAITQDGTRLLSGGGEGQVRIWKLTR---------ESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLW  280 (515)
Q Consensus       210 ~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~---------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw  280 (515)
                      ...+-++.++...+++.|+.++ +.|.....         ......  ....-..|..++|+.+  .++.. .++.+..+
T Consensus        37 ~~~~LLAVsn~~GLl~aa~~~~-l~V~~t~~l~~~~~~~~~~~~~~--~~~~ip~v~~vafs~d--~l~v~-~~~~l~~~  110 (381)
T d1xipa_          37 ASLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFK--WEKEIPDVIFVCFHGD--QVLVS-TRNALYSL  110 (381)
T ss_dssp             SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCS--EEEECTTEEEEEEETT--EEEEE-ESSEEEEE
T ss_pred             cccceEEEeCCCCEEEEECCCE-EEEEEHHHHHHHhhccCCCCcce--eccCCCCeEEEEeeCC--EEEEE-eCCCEEEE
Confidence            3456788888777888777765 66766421         111111  1112235888898755  34444 44567777


Q ss_pred             EcccceEEEE-EEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecC----CCccEEEEEEcCCCCEEEEE
Q psy17610        281 DLIKSTRLII-MILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGS----DVAAVNCVDFVDDGKYFLTG  355 (515)
Q Consensus       281 d~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~~  355 (515)
                      +...-..... .....++..+.++|.  .++....++.+.++++..++......+.    -.....+++|++.|+.++++
T Consensus       111 ~~~~l~~~~~~~~~~~~~~~~~~~p~--~~~l~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~ws~kgkq~v~~  188 (381)
T d1xipa_         111 DLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQLAQNVTSFDVTNSQLAVLLKDRSFQSFAW  188 (381)
T ss_dssp             ESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEEEEESEEEEEECSSEEEEEETTSCEEEEEE
T ss_pred             EeeccccccccccccccccceecCCc--eeEEEecCCCEEEEEeccCccccccCCcceEEecCCceEEEEeCCcEEEEEe
Confidence            7765433322 234456777777764  5667778899999999888643322110    11456777888877777776


Q ss_pred             cCCCeEEEE-EccCCeeeeeccCCCCCeeEEEECCCCcEEEEEe
Q psy17610        356 GADQIVKMW-MYREGVPCFVGIGHAASITKIKISPDKKVIVSVS  398 (515)
Q Consensus       356 ~~dg~i~i~-d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~  398 (515)
                      ..+ ...+- ++.....+.........+.++.|-.+..++++-+
T Consensus       189 ~g~-~~q~k~~i~~~~~~~~p~~~~~~v~sI~WL~~~~F~vvy~  231 (381)
T d1xipa_         189 RNG-EMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG  231 (381)
T ss_dssp             ETT-EEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred             CCC-ceeeccCCCCccccCCCcCCCcceeEEEEecCceEEEEEC
Confidence            432 22211 1111111111112345688999987777766553

>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: Serum paraoxonase/arylesterase 1, PON1
domain: Serum paraoxonase/arylesterase 1, PON1
species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=93.16  E-value=2  Score=35.89  Aligned_cols=169  Identities=13%  Similarity=0.076  Sum_probs=94.2

Q ss_pred             CCeEEEEecCCCceEEE-e--cCC----CCCCeEEEEE--cCCCC-EEEEe---cCCCcEEEEEccCCceeeE--Eeecc
Q psy17610        187 DGFIRCFTPQSGKLKFI-I--PNA----HNRGVTALAI--TQDGT-RLLSG---GGEGQVRIWKLTRESQSLQ--CVLKE  251 (515)
Q Consensus       187 dg~i~~~~~~~~~~~~~-~--~~~----~~~~v~~~~~--~~~~~-~l~~~---~~d~~i~iw~~~~~~~~~~--~~~~~  251 (515)
                      .|.|.++|+.+.+.... +  ...    ..-....+..  .++|. +|++.   ....+|.+|++........  .....
T Consensus        67 ~G~i~~~dl~~~~~~~~~l~~~~~~~~~~~f~PhGi~l~~~~dg~~~L~vvnH~~~~~~ieif~~~~~~~~l~~~~~v~~  146 (340)
T d1v04a_          67 SGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRH  146 (340)
T ss_dssp             CCEEEEEETTSSSCCEEECEEECSSSCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECC
T ss_pred             CCeEEEEecCCCCCcceEEEecCCCCCCcceeccceeEEEcCCCcEEEEEEeccCCCceeEEEEEeCCCCeEEEEeecCC
Confidence            48899999876543221 1  001    1112344443  44565 34443   3456799998864443322  22221


Q ss_pred             -ccCceEEEEEecCCCEEEEEeC---------------CCcEEEEEcccceEEEEEEcCccEEEEEEcCCCcEEEEEEC-
Q psy17610        252 -HTSSVSVIQIKSDSKEAMSAST---------------DGTCVLWDLIKSTRLIIMILPSMIMSAAYHPSEVQLITCST-  314 (515)
Q Consensus       252 -~~~~v~~~~~~~~~~~l~~~~~---------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-  314 (515)
                       .......+.+..++..++|-..               -+...+|....++.......-.....++++|++++++++.. 
T Consensus       147 ~~~~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~~~~~~~~~~~~~~l~~pNGI~~s~d~~~lyVa~t~  226 (340)
T d1v04a_         147 KLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVVAEGFDFANGINISPDGKYVYIAELL  226 (340)
T ss_dssp             TTCSSEEEEEEEETTEEEEEESCSCCSHHHHHHHHHTTCCCEEEEEECSSCEEEEEEEESSEEEEEECTTSSEEEEEEGG
T ss_pred             ccccCccceEEecCCCEEEecCccCcChhhhhhhHhhcCCceeEEEEcCCceEEEcCCCCccceeEECCCCCEEEEEeCC
Confidence             2244688888888887777321               12334444444444333444456889999999988776654 


Q ss_pred             CCeEEEEeCCCCceEEEEe-cCCCccEEEEEEcC-CCCEEEEE
Q psy17610        315 NKMIDYWETCDGSIIRSLE-GSDVAAVNCVDFVD-DGKYFLTG  355 (515)
Q Consensus       315 ~~~i~~~d~~~~~~~~~~~-~~~~~~i~~~~~~~-~~~~l~~~  355 (515)
                      .+.|+.|++.....+.... ..-....-.+.+.+ +|.+.+++
T Consensus       227 ~~~i~~y~~~~~~~l~~~~~~~l~~~pDNi~~d~~~g~lwva~  269 (340)
T d1v04a_         227 AHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGC  269 (340)
T ss_dssp             GTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEE
T ss_pred             CCeEEEEEeCCCcccceEEEecCCCCCCccEEecCCCEEEEEE
Confidence            7789999887554332211 11225566788876 45554443

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=92.96  E-value=2.7  Score=36.78  Aligned_cols=58  Identities=16%  Similarity=0.201  Sum_probs=39.9

Q ss_pred             ecCCCcEEEEEEecCCCEEEEEecCceEEEEECCCCceeEEe-e------ccCccCeEEEEeCCC
Q psy17610         78 LKDDSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTLTLV-N------TCHTSAIYDLQFPVN  135 (515)
Q Consensus        78 ~~~~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~-~------~~h~~~v~~~~~~~~  135 (515)
                      ...-....+|+|.|+|++|++--..|.|++++.+++...... +      ..-++....++|+|+
T Consensus        23 a~~L~~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pd   87 (450)
T d1crua_          23 LSNLNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD   87 (450)
T ss_dssp             ECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred             ECCCCCceEEEEeCCCeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCC
Confidence            333467789999999998877645799999998775432211 1      112356788999985

>d1wp5a_ b.68.10.1 (A:) Topoisomerase IV subunit A, ParC, C-terminal domain {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: GyrA/ParC C-terminal domain-like
family: GyrA/ParC C-terminal domain-like
domain: Topoisomerase IV subunit A, ParC, C-terminal domain
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=89.54  E-value=4.7  Score=33.18  Aligned_cols=234  Identities=13%  Similarity=0.128  Sum_probs=122.7

Q ss_pred             CCCceEEEecCCCCeEEEEcCCC-----CCCcccccccc-eEEee-cccccccccccccc---ccccCcceeeeccceEE
Q psy17610          5 PNDEFAYCGTTSGDILKLNLNYP-----SDLSKVESDTA-AVLMG-CYGKLIKKKVSTKL---KDVNAEDVSLYSAGVTA   74 (515)
Q Consensus         5 ~~~~~~~~g~~~g~i~~~~~~~~-----~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~   74 (515)
                      |+.+.+++-|..|.|.-.++...     .-...-+.|.. .++.+ .-..++.-++.+++   +.++.+..+.-+.|...
T Consensus         3 ~~E~v~v~lS~~GyiKR~~~~~~~~~~~~~~~~k~~D~v~~~~~~~t~d~ll~fT~~Grvy~l~v~eiP~~~~~s~G~pi   82 (323)
T d1wp5a_           3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDTDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQHI   82 (323)
T ss_dssp             SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTTCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEEG
T ss_pred             CCCCEEEEEeCCCeEEEeeHHHhhhcCCCCCcccCCceEEEEEEEcCCCEEEEEecCCEEEEEeeccCcccccccccccc
Confidence            45667788889999987765421     11111122222 12222 11223332222222   22333322222233222


Q ss_pred             EE--EecCCCcEEEEE-Eec--CCCEEEEEecCceEEEEECCCC------ceeEEeeccCccCeEEEEeCCCCcEEEEEe
Q psy17610         75 LY--LLKDDSGISSLQ-YNP--VNNKVFVGTVNCEIFLIDMNSG------FTLTLVNTCHTSAIYDLQFPVNFSSVFATC  143 (515)
Q Consensus        75 ~~--~~~~~~~v~~~~-~s~--~~~~l~~~~~d~~i~iw~~~~~------~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~  143 (515)
                      ..  .......|..+. ..+  ...+|+..+..|.++..++..-      .....+.-.-...+..+....+...++.++
T Consensus        83 ~~ll~l~~~e~ii~~~~~~~~~~~~~l~~~Tk~G~iKr~~l~~f~~~~~~~g~~~i~L~~~D~l~~v~~~~~~~~i~l~t  162 (323)
T d1wp5a_          83 ANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNELFLVT  162 (323)
T ss_dssp             GGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCSEEEEEE
T ss_pred             eeeecccCCcceEEEeeccccccceeEEEEeehhheeeccHHHhhhhhccchhhhccccccccccceeccCCCeEEEEEE
Confidence            11  123444554443 332  3678999999999999987531      112212223455677777776667899999


Q ss_pred             cCCcEEEEeCCCCce-------e--EEEEecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCC-------ceEEEec--
Q psy17610        144 SKNDIRIWSVRTLNE-------L--LRISVMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSG-------KLKFIIP--  205 (515)
Q Consensus       144 ~d~~i~iw~~~~~~~-------~--~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~-------~~~~~~~--  205 (515)
                      ..|.+..++.+.-..       +  ..+.....-+......+++..++..+..|..+.-.+..-       +-...+.  
T Consensus       163 ~~G~~lrf~~~~vr~~gr~a~GV~~ikL~~~D~vv~~~~~~~~~~~ll~~T~~G~gKr~~~~e~~~~~RggkGv~~~k~~  242 (323)
T d1wp5a_         163 HNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTEFEKATRAKRGVVILREL  242 (323)
T ss_dssp             TTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGGSCCCCTTSCCEECSCCC
T ss_pred             ecceeeEeecccccccCcccccccccccccccccchhhhccccccceeeeeeeheeecccchhhcccccccccccccccc
Confidence            999998888764221       1  122222223334445566778999999998877654321       1122221  


Q ss_pred             CCCCCCeEEEEEcCCCCEEEEecCCCcEEEEEc
Q psy17610        206 NAHNRGVTALAITQDGTRLLSGGGEGQVRIWKL  238 (515)
Q Consensus       206 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~  238 (515)
                      ......+..+....+...++..+..|.+.-.++
T Consensus       243 k~~~~~v~~~~~~~~~d~l~l~T~~g~~~r~~~  275 (323)
T d1wp5a_         243 KANPHRISGFVVAQDSDTIYLQTEKSFIETIKV  275 (323)
T ss_dssp             SSSCCCEEEEEEECTTCEEEEEETTSCEEEEEG
T ss_pred             ccccceeeeeEecCCCCEEEEEeCCCEEEEEEh
Confidence            112234555555555556666666777666555

>d1tl2a_ b.67.1.1 (A:) Tachylectin-2 {Japanese horseshoe crab (Tachypleus tridentatus) [TaxId: 6853]}

class: All beta proteins
fold: 5-bladed beta-propeller
superfamily: Tachylectin-2
family: Tachylectin-2
domain: Tachylectin-2
species: Japanese horseshoe crab (Tachypleus tridentatus) [TaxId: 6853]

Probab=84.62  E-value=6  Score=29.20  Aligned_cols=141  Identities=13%  Similarity=-0.066  Sum_probs=80.9

Q ss_pred             CCcEEEEEEecCCCEEEEEecCceEEEEECCCCcee------EEeeccCccCeEEEEeCCCCcEEEEEecCCcEEEEeCC
Q psy17610         81 DSGISSLQYNPVNNKVFVGTVNCEIFLIDMNSGFTL------TLVNTCHTSAIYDLQFPVNFSSVFATCSKNDIRIWSVR  154 (515)
Q Consensus        81 ~~~v~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~------~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~  154 (515)
                      =..+.-++|||+|++.++-  .+.++.=...+....      .++-.+-=+....+-|+|.| .|.+.+. +.++-=.-.
T Consensus        39 ~~n~~~i~fsP~G~LyaVr--~~~lY~Gp~~s~~nq~wf~~atrIG~ggWn~FkflffdP~G-~LyaVt~-~~LYr~~pP  114 (235)
T d1tl2a_          39 WSNFKFLFLSPGGELYGVL--NDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNG-YLYAVSK-DKLYKASPP  114 (235)
T ss_dssp             CTTCSEEEECTTSCEEEEE--TTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTS-CEEEEET-TEEEEESCC
T ss_pred             ccceeEEEECCCCcEEEEE--CCeEEECCCCCcchHHHHHhhhhcccCcccceEEEEECCCc-eEEEecC-cceecCCcC
Confidence            3556779999999988774  345666555442211      22222233455678899998 5555553 533322222


Q ss_pred             CCce------eEEEE-ecCeEEEEEEEeeCCCEEEEEeCCCeEEEEecCCCce------EEEecCCCCCCeEEEEEcCCC
Q psy17610        155 TLNE------LLRIS-VMNMICACIVFTYDGKAILSGWNDGFIRCFTPQSGKL------KFIIPNAHNRGVTALAITQDG  221 (515)
Q Consensus       155 ~~~~------~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~------~~~~~~~~~~~v~~~~~~~~~  221 (515)
                      +.++      ...+- ..-..+..+-|.|+|.+-++ ..+ .+.-+....+..      -..+..++-....-+.|+|+|
T Consensus       115 tn~~q~W~g~a~~vG~~gw~df~~lFFdP~G~LYaV-~~~-~l~k~~pP~~~~d~WL~~st~igr~~w~~~~fi~Fs~dG  192 (235)
T d1tl2a_         115 QSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAV-HGQ-QFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVG  192 (235)
T ss_dssp             CSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEE-ETT-EEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTS
T ss_pred             cccchhhhhhhhhhccCCcCceeEEEECCCceEEEE-ECC-cEEEcCCCCCCCchhhhhhhhhccCcccCceEEEECCCC
Confidence            2211      11111 11124678999999986666 344 466666544321      122335677778899999999


Q ss_pred             CEEEEe
Q psy17610        222 TRLLSG  227 (515)
Q Consensus       222 ~~l~~~  227 (515)
                      ++..+-
T Consensus       193 ~L~~v~  198 (235)
T d1tl2a_         193 TLFGVQ  198 (235)
T ss_dssp             CEEEEE
T ss_pred             cEEEEe
Confidence            877663

>d1wp5a_ b.68.10.1 (A:) Topoisomerase IV subunit A, ParC, C-terminal domain {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: GyrA/ParC C-terminal domain-like
family: GyrA/ParC C-terminal domain-like
domain: Topoisomerase IV subunit A, ParC, C-terminal domain
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=82.62  E-value=11  Score=30.79  Aligned_cols=241  Identities=11%  Similarity=0.047  Sum_probs=129.1

Q ss_pred             CCCCEEEEecCCCcEEEEEccCCc--eeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEc---cc------ceE
Q psy17610        219 QDGTRLLSGGGEGQVRIWKLTRES--QSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDL---IK------STR  287 (515)
Q Consensus       219 ~~~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~---~~------~~~  287 (515)
                      |+...+++-+.+|.|+--.+..-.  ...-..+. ..+.+..+........++.-+..|.++.-..   ..      +.+
T Consensus         3 ~~E~v~v~lS~~GyiKR~~~~~~~~~~~~~~~~k-~~D~v~~~~~~~t~d~ll~fT~~Grvy~l~v~eiP~~~~~s~G~p   81 (323)
T d1wp5a_           3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMK-DTDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQH   81 (323)
T ss_dssp             SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCC-TTCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEE
T ss_pred             CCCCEEEEEeCCCeEEEeeHHHhhhcCCCCCccc-CCceEEEEEEEcCCCEEEEEecCCEEEEEeeccCccccccccccc
Confidence            456678888889988866543100  00001111 2334555444445556666677777655443   21      222


Q ss_pred             EEE---EEcCccEEEEE-Ec--CCCcEEEEEECCCeEEEEeCCCC------ceEEEEecCCCccEEEEEEcCCCCEEEEE
Q psy17610        288 LII---MILPSMIMSAA-YH--PSEVQLITCSTNKMIDYWETCDG------SIIRSLEGSDVAAVNCVDFVDDGKYFLTG  355 (515)
Q Consensus       288 ~~~---~~~~~~~~~~~-~~--~~~~~l~~~~~~~~i~~~d~~~~------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~  355 (515)
                      +..   +.....+..+. ..  +...+++..+..|.++..++..-      +....+.......+..+....+...++.+
T Consensus        82 i~~ll~l~~~e~ii~~~~~~~~~~~~~l~~~Tk~G~iKr~~l~~f~~~~~~~g~~~i~L~~~D~l~~v~~~~~~~~i~l~  161 (323)
T d1wp5a_          82 IANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNELFLV  161 (323)
T ss_dssp             GGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCSEEEEE
T ss_pred             ceeeecccCCcceEEEeeccccccceeEEEEeehhheeeccHHHhhhhhccchhhhccccccccccceeccCCCeEEEEE
Confidence            211   11222333333 33  24678999999999998876432      22222333344566677777777788888


Q ss_pred             cCCCeEEEEEccCCeee---------eeccCCCCCeeE-EEECCCCcEEEEEeCCCcEEEEeCCCCcCccCCCcccceee
Q psy17610        356 GADQIVKMWMYREGVPC---------FVGIGHAASITK-IKISPDKKVIVSVSADGGIFLWTFPELEDDVGDSRSLSSKI  425 (515)
Q Consensus       356 ~~dg~i~i~d~~~~~~~---------~~~~~~~~~i~~-~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~  425 (515)
                      +..|.+..++...-...         ..+.. ...+.+ ....+++..|++.+..|..+.-.+..............   
T Consensus       162 t~~G~~lrf~~~~vr~~gr~a~GV~~ikL~~-~D~vv~~~~~~~~~~~ll~~T~~G~gKr~~~~e~~~~~RggkGv~---  237 (323)
T d1wp5a_         162 THNGYALWFDESEVSIVGVRAAGVKGMNLKE-GDYIVSGQLITSKDESIVVATQRGAVKKMKLTEFEKATRAKRGVV---  237 (323)
T ss_dssp             ETTSEEEEEEGGGSCBCCSSCCCEECCCCCT-TCCEEEEEEECCTTCEEEEEETTSEEEEEEGGGSCCCCTTSCCEE---
T ss_pred             EecceeeEeecccccccCccccccccccccc-ccccchhhhccccccceeeeeeeheeecccchhhccccccccccc---
Confidence            99999999987542221         22222 234444 44556677888888999888766544321110000000   


Q ss_pred             ecccccccceeeecCcccEEEeeeccCCcEEEEeecCCeEEEEecC
Q psy17610        426 SRSTARSTRLIIMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETC  471 (515)
Q Consensus       426 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~  471 (515)
                      .       ..........+..+....+...|+..+..|.+.-.++.
T Consensus       238 ~-------~k~~k~~~~~v~~~~~~~~~d~l~l~T~~g~~~r~~~~  276 (323)
T d1wp5a_         238 I-------LRELKANPHRISGFVVAQDSDTIYLQTEKSFIETIKVG  276 (323)
T ss_dssp             C-------SCCCSSSCCCEEEEEEECTTCEEEEEETTSCEEEEEGG
T ss_pred             c-------ccccccccceeeeeEecCCCCEEEEEeCCCEEEEEEhh
Confidence            0       00000112235555555566667777777877655543

>d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II {Streptomyces exfoliatus [TaxId: 1905]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: RCC1/BLIP-II
family: beta-lactamase inhibitor protein-II, BLIP-II
domain: beta-lactamase inhibitor protein-II, BLIP-II
species: Streptomyces exfoliatus [TaxId: 1905]

Probab=80.51  E-value=12  Score=29.65  Aligned_cols=185  Identities=15%  Similarity=0.096  Sum_probs=84.6

Q ss_pred             CCCCCeEEEEEcCCCCEEEEecCCCcEEEEEccCCceeeEEeeccccCceEEEEEecCCCEEEEEeCCCcEEEEEcccce
Q psy17610        207 AHNRGVTALAITQDGTRLLSGGGEGQVRIWKLTRESQSLQCVLKEHTSSVSVIQIKSDSKEAMSASTDGTCVLWDLIKST  286 (515)
Q Consensus       207 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~  286 (515)
                      .....|..++--..  +.+... ||.|..|-.+...+ +- .-......+..++.  ...+.+.- .|+.+..|.....-
T Consensus        23 ~~~~~i~~va~G~~--h~~al~-dG~v~~wG~N~~GQ-lG-~~~~~~~~v~~v~~--G~~~~~al-~dg~v~~wG~~~~g   94 (273)
T d1jtdb_          23 EAQSGVDAIAGGYF--HGLALK-GGKVLGWGANLNGQ-LT-MPAATQSGVDAIAA--GNYHSLAL-KDGEVIAWGGNEDG   94 (273)
T ss_dssp             GGSSSEEEEEECSS--EEEEEE-TTEEEEEECCTTST-TS-CCGGGGSCCCEEEE--CSSEEEEE-ETTEEEEEECCTTS
T ss_pred             cCCCCcEEEEccCC--EEEEEE-CCEEEEEeCCCCCc-ee-eeecccccceEEec--CCCceeee-eeeeeeccCCCcce
Confidence            34456777776432  333334 79999997643221 11 11122334555543  22222222 47889999753321


Q ss_pred             EEE-EEEcCccEEEEEEcCCCcEEEEEECCCeEEEEeCCCCceEEEEecCCCccEEEEEEcCCCCEEEEEcCCCeEEEEE
Q psy17610        287 RLI-IMILPSMIMSAAYHPSEVQLITCSTNKMIDYWETCDGSIIRSLEGSDVAAVNCVDFVDDGKYFLTGGADQIVKMWM  365 (515)
Q Consensus       287 ~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d  365 (515)
                      ... .......+..++.....  .+ ...++.+..|......... ........+..++-.  ...++ ...++.++.|-
T Consensus        95 q~~~~~~~~~~~~~i~~~~~~--~~-~~~dg~v~~~g~~~~~~~~-~~~~~~~~v~~~~~~--~~~~~-~~~~g~~~~~G  167 (273)
T d1jtdb_          95 QTTVPAEARSGVDAIAAGAWA--SY-ALKDGKVIAWGDDSDGQTT-VPAEAQSGVTALDGG--VYTAL-AVKNGGVIAWG  167 (273)
T ss_dssp             TTCCCGGGGSSCCEEEEETTE--EE-EEETTEEEEEECCTTSTTS-CCGGGGSSEEEEEEC--SSEEE-EEETTEEEEEE
T ss_pred             eeccccccccceeEEeeeccc--cc-ccccccceecccCCCCcee-eeccCCceEEEEecc--ceeee-eecccceeEee
Confidence            100 00011122233322221  11 2247778877643322111 111111334333322  12222 33467888887


Q ss_pred             ccCCeeeeeccCCCCCeeEEEECCCCcEEEEEeCCCcEEEEeCC
Q psy17610        366 YREGVPCFVGIGHAASITKIKISPDKKVIVSVSADGGIFLWTFP  409 (515)
Q Consensus       366 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw~~~  409 (515)
                      ................|..++...... ++ -. ||.|+.|=..
T Consensus       168 ~~~~g~~~~~~~~~~~v~~Is~G~~h~-~~-l~-dG~v~~WG~n  208 (273)
T d1jtdb_         168 DNYFGQTTVPAEAQSGVDDVAGGIFHS-LA-LK-DGKVIAWGDN  208 (273)
T ss_dssp             CCTTSTTSCCGGGSSSEEEEEECSSEE-EE-EE-TTEEEEEECC
T ss_pred             cccCCcccccccccCCccceeccceee-EE-Ee-cCcEEEcCCC
Confidence            654333332233456788887754432 22 33 7999999543