Psyllid ID: psy1765
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 867 | 2.2.26 [Sep-21-2011] | |||||||
| Q8MVS5 | 632 | Polypeptide N-acetylgalac | yes | N/A | 0.447 | 0.613 | 0.428 | 1e-106 | |
| Q6P6V1 | 608 | Polypeptide N-acetylgalac | yes | N/A | 0.361 | 0.514 | 0.553 | 1e-100 | |
| Q921L8 | 608 | Polypeptide N-acetylgalac | yes | N/A | 0.325 | 0.463 | 0.579 | 1e-100 | |
| Q8NCW6 | 608 | Polypeptide N-acetylgalac | yes | N/A | 0.332 | 0.473 | 0.579 | 2e-99 | |
| Q8N428 | 558 | Putative polypeptide N-ac | no | N/A | 0.404 | 0.629 | 0.417 | 3e-86 | |
| Q7K755 | 605 | Putative polypeptide N-ac | yes | N/A | 0.409 | 0.586 | 0.400 | 2e-84 | |
| Q9JJ61 | 558 | Putative polypeptide N-ac | no | N/A | 0.403 | 0.627 | 0.407 | 7e-81 | |
| P34678 | 612 | Polypeptide N-acetylgalac | no | N/A | 0.320 | 0.454 | 0.526 | 2e-80 | |
| Q8BVG5 | 550 | Polypeptide N-acetylgalac | no | N/A | 0.407 | 0.641 | 0.394 | 1e-79 | |
| Q96FL9 | 552 | Polypeptide N-acetylgalac | no | N/A | 0.407 | 0.639 | 0.392 | 2e-79 |
| >sp|Q8MVS5|GLT35_DROME Polypeptide N-acetylgalactosaminyltransferase 35A OS=Drosophila melanogaster GN=Pgant35A PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 385 bits (990), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/462 (42%), Positives = 276/462 (59%), Gaps = 74/462 (16%)
Query: 1 MVLNEQDLITRDEGYRYYGFNALISNKLSLDRKIPDTRNSLCANQTFPSTLPSTSVIICF 60
+V N+QD RD GY+++ FNAL+SN + L R I P T +C
Sbjct: 95 VVRNKQDKYIRDIGYKHHAFNALVSNNIGLFRAI-----------------PDTRHKVCD 137
Query: 61 YNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYR 120
E + ++L I++ ++E+ L ++T ++ R Y
Sbjct: 138 RQE-------------TTEAENLPQASIVMCFYNEHKMTLMRSIKTVLE-----RTPSY- 178
Query: 121 TSKREGLIRARMFGAKYATGKNRIQSLLHEIILVNDFSEYPS---NLHGEVESFVKGLNN 177
LL EIILV+D S+ P +LHG++ + +K N
Sbjct: 179 --------------------------LLREIILVDDHSDLPELEFHLHGDLRARLKYDN- 211
Query: 178 GRVHLYRTSKREGLIRARMFGAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTV 237
+ + +REGLIR+R+ GA+ A G VLVFLDSHIEVN WLEPLL I T+ V
Sbjct: 212 --LRYIKNEQREGLIRSRVIGAREAVGDVLVFLDSHIEVNQQWLEPLLRLIKSENATLAV 269
Query: 238 PIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMAGGLFA 297
P+ID+INADTF+YT S LVRGGFNWGLHF+WENLP+GTL EDF P SPTMAGGLFA
Sbjct: 270 PVIDLINADTFEYTPSPLVRGGFNWGLHFRWENLPEGTLKVPEDFRGPFRSPTMAGGLFA 329
Query: 298 IDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGHVFRSRRPYNNGHN 357
++R+YF LG+YD ++IWGGEN+E+SFR W CGG++ ++PCSR+GH+FR RRPY +
Sbjct: 330 VNRKYFQHLGEYDMAMDIWGGENIEISFRAWQCGGAIKIVPCSRVGHIFRKRRPYTSPDG 389
Query: 358 EDPLTRNSLRVAHVWMDEYIEHFLKQRPEARNIDYGDVTDRKQLRARLGCKSFKWYLDNV 417
+ + +NSLR+AHVWMD+Y +++LK + DYGD++DR +LR RL C+ F WYL NV
Sbjct: 390 ANTMLKNSLRLAHVWMDQYKDYYLKHEKVPKTYDYGDISDRLKLRERLQCRDFAWYLKNV 449
Query: 418 YPEMILPSDDEERLKKKWAQVEQPKFQPWYSRARNYTNSLRV 459
YPE+ +P ++ ++ P FQPW+SR RNY ++ ++
Sbjct: 450 YPELHVPGEESKK------SAAAPIFQPWHSRKRNYVDTFQL 485
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Essential glycotransferase, which catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. It can both act as a peptide transferase that transfers GalNAc onto unmodified peptide substrates, and as a glycopeptide transferase that requires the prior addition of a GalNAc on a peptide before adding additional GalNAc moieties. Drosophila melanogaster (taxid: 7227) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 4EC: 1 |
| >sp|Q6P6V1|GLT11_RAT Polypeptide N-acetylgalactosaminyltransferase 11 OS=Rattus norvegicus GN=Galnt11 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 367 bits (941), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/318 (55%), Positives = 229/318 (72%), Gaps = 5/318 (1%)
Query: 147 LLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKV 206
LLHEIILV+D S++ +L GE++ +++ +V + R KREGLIR RM GA +ATG+V
Sbjct: 182 LLHEIILVDDSSDF-DDLKGELDEYIQRYLPAKVKVIRNMKREGLIRGRMIGAAHATGEV 240
Query: 207 LVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLHF 266
LVFLDSH EVN WL+PLL I E +TV P+IDII+ADT Y+SS +VRGGFNWGLHF
Sbjct: 241 LVFLDSHCEVNVMWLQPLLAIILEDPHTVVCPVIDIISADTLAYSSSPVVRGGFNWGLHF 300
Query: 267 KWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFR 326
KW+ +P L ++ PI SPTMAGGLFA++RQYF+ LGQYD+G++IWGGENLE+SFR
Sbjct: 301 KWDLVPVSDLGGADSATAPIRSPTMAGGLFAMNRQYFNDLGQYDSGMDIWGGENLEISFR 360
Query: 327 IWMCGGSLAMIPCSRIGHVFRSRRPYNNGHNEDPLTRNSLRVAHVWMDEYIEHFLKQRPE 386
IWMCGG L +IPCSR+GH+FR RRPY + +D +T NSLR+AHVW+DEY E + RP+
Sbjct: 361 IWMCGGKLFIIPCSRVGHIFRKRRPYGSPEGQDTMTHNSLRLAHVWLDEYKEQYFSLRPD 420
Query: 387 ARNIDYGDVTDRKQLRARLGCKSFKWYLDNVYPEMILPSDDEERLKKKWAQVEQPKFQPW 446
+ +G++++R +LR +LGC+SFKWYLDNVYPEM + S + RL++ PK
Sbjct: 421 LKTKSFGNISERVELRKKLGCQSFKWYLDNVYPEMQV-SGPKARLQQPVFINRGPKRPRV 479
Query: 447 YSRARNY---TNSLRVAH 461
R R Y TN VA
Sbjct: 480 LLRGRLYHLQTNKCLVAQ 497
|
Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. Displays the same enzyme activity toward Muc1, Muc4.1, and EA2 than GALNT1. Does not appear to be involved in glycosylation of erythropoietin. Rattus norvegicus (taxid: 10116) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|Q921L8|GLT11_MOUSE Polypeptide N-acetylgalactosaminyltransferase 11 OS=Mus musculus GN=Galnt11 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 367 bits (941), Expect = e-100, Method: Compositional matrix adjust.
Identities = 164/283 (57%), Positives = 217/283 (76%), Gaps = 1/283 (0%)
Query: 147 LLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKV 206
LLHEIILV+D S++ +L GE++ +++ +V + R KREGLIR RM GA +ATG+V
Sbjct: 182 LLHEIILVDDSSDF-DDLKGELDEYIQRYLPAKVKVIRNMKREGLIRGRMIGAAHATGEV 240
Query: 207 LVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLHF 266
LVFLDSH EVN WL+PLL I E +TV P+IDII+ADT Y+SS +VRGGFNWGLHF
Sbjct: 241 LVFLDSHCEVNVMWLQPLLAIILEDPHTVVCPVIDIISADTLAYSSSPVVRGGFNWGLHF 300
Query: 267 KWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFR 326
KW+ +P L + PI SPTMAGGLFA++RQYF+ LGQYD+G++IWGGENLE+SFR
Sbjct: 301 KWDLVPVSELGGPDGATAPIRSPTMAGGLFAMNRQYFNDLGQYDSGMDIWGGENLEISFR 360
Query: 327 IWMCGGSLAMIPCSRIGHVFRSRRPYNNGHNEDPLTRNSLRVAHVWMDEYIEHFLKQRPE 386
IWMCGG L ++PCSR+GH+FR RRPY + +D +T NSLR+AHVW+DEY E + RP+
Sbjct: 361 IWMCGGKLFILPCSRVGHIFRKRRPYGSPEGQDTMTHNSLRLAHVWLDEYKEQYFSLRPD 420
Query: 387 ARNIDYGDVTDRKQLRARLGCKSFKWYLDNVYPEMILPSDDEE 429
+N +G++++R +LR +LGC+SFKWYLDN+YPEM +P + +
Sbjct: 421 LKNKSFGNISERVELRKKLGCQSFKWYLDNIYPEMQIPGPNAK 463
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Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. Displays the same enzyme activity toward Muc1, Muc4.1, and EA2 than GALNT1. Does not appear to be involved in glycosylation of erythropoietin. Mus musculus (taxid: 10090) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|Q8NCW6|GLT11_HUMAN Polypeptide N-acetylgalactosaminyltransferase 11 OS=Homo sapiens GN=GALNT11 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 364 bits (935), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 172/297 (57%), Positives = 222/297 (74%), Gaps = 9/297 (3%)
Query: 147 LLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKV 206
LLHEIILV+D S++ +L GE++ +V+ G++ + R +KREGLIR RM GA +ATG+V
Sbjct: 182 LLHEIILVDDDSDF-DDLKGELDEYVQKYLPGKIKVIRNTKREGLIRGRMIGAAHATGEV 240
Query: 207 LVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLHF 266
LVFLDSH EVN WL+PLL I E +TV P+IDII+ADT Y+SS +VRGGFNWGLHF
Sbjct: 241 LVFLDSHCEVNVMWLQPLLAAIREDRHTVVCPVIDIISADTLAYSSSPVVRGGFNWGLHF 300
Query: 267 KWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFR 326
KW+ +P L +E PI SPTMAGGLFA++RQYF LGQYD+G++IWGGENLE+SFR
Sbjct: 301 KWDLVPLSELGRAEGATAPIKSPTMAGGLFAMNRQYFHELGQYDSGMDIWGGENLEISFR 360
Query: 327 IWMCGGSLAMIPCSRIGHVFRSRRPYNNGHNEDPLTRNSLRVAHVWMDEYIEHFLKQRPE 386
IWMCGG L +IPCSR+GH+FR RRPY + +D +T NSLR+AHVW+DEY E + RP+
Sbjct: 361 IWMCGGKLFIIPCSRVGHIFRKRRPYGSPEGQDTMTHNSLRLAHVWLDEYKEQYFSLRPD 420
Query: 387 ARNIDYGDVTDRKQLRARLGCKSFKWYLDNVYPEMILPSDDEERLKKKWAQVEQPKF 443
+ YG++++R +LR +LGCKSFKWYLDNVYPEM ++ A+ +QP F
Sbjct: 421 LKTKSYGNISERVELRKKLGCKSFKWYLDNVYPEM--------QISGSHAKPQQPIF 469
|
Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. Displays the same enzyme activity toward Muc1, Muc4.1, and EA2 than GALNT1. Does not appear to be involved in glycosylation of erythropoietin. Homo sapiens (taxid: 9606) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|Q8N428|GLTL1_HUMAN Putative polypeptide N-acetylgalactosaminyltransferase-like protein 1 OS=Homo sapiens GN=GALNTL1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 320 bits (820), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 177/424 (41%), Positives = 237/424 (55%), Gaps = 73/424 (17%)
Query: 3 LNEQDLITRDEGYRYYGFNALISNKLSLDRKIPDTRNSLCANQTFPSTLPSTSVIICFYN 62
L+ + L ++ YR + FN L S+KLS DR I DTR+ C + ++ S LP+TSVII F+N
Sbjct: 74 LSAKQLKAGEDPYRQHAFNQLESDKLSPDRPIRDTRHYSCPSVSYSSDLPATSVIITFHN 133
Query: 63 EHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTS 122
E +T L RT +S+L+ P+NL
Sbjct: 134 EARST--------LLRTVKSVLNRT---------PANL---------------------- 154
Query: 123 KREGLIRARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHL 182
+ EIILV+DFS P E + +V
Sbjct: 155 -------------------------IQEIILVDDFSSDP-------EDCLLLTRIPKVKC 182
Query: 183 YRTSKREGLIRARMFGAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDI 242
R +REGLIR+R+ GA A VL FLDSH EVNT WL P+L + E V PIID+
Sbjct: 183 LRNDRREGLIRSRVRGADVAAATVLTFLDSHCEVNTEWLPPMLQRVKEDHTRVVSPIIDV 242
Query: 243 INADTFQY-TSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQ 301
I+ D F Y +SA +RGGF+W LHFKWE +P + D +PI +P +AGG+F ID+
Sbjct: 243 ISLDNFAYLAASADLRGGFDWSLHFKWEQIPLEQKMTRTDPTRPIRTPVIAGGIFVIDKS 302
Query: 302 YFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGHVFRSRRPYNNGH-NEDP 360
+F+ LG+YDA ++IWGGEN ELSFR+WMCGGSL ++PCSR+GHVFR R PYN N
Sbjct: 303 WFNHLGKYDAQMDIWGGENFELSFRVWMCGGSLEIVPCSRVGHVFRKRHPYNFPEGNALT 362
Query: 361 LTRNSLRVAHVWMDEYIEHFLKQRPEARNIDYGDVTDRKQLRARLGCKSFKWYLDNVYPE 420
RN+ R A VWMDEY +++ + RP A +G V R + R ++ CKSF+WYL+NVYPE
Sbjct: 363 YIRNTKRTAEVWMDEYKQYYYEARPSAIGKAFGSVATRIEQRKKMNCKSFRWYLENVYPE 422
Query: 421 MILP 424
+ +P
Sbjct: 423 LTVP 426
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May catalyze the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. Homo sapiens (taxid: 9606) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|Q7K755|GLT11_CAEEL Putative polypeptide N-acetylgalactosaminyltransferase 11 OS=Caenorhabditis elegans GN=gly-11 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 314 bits (804), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 170/424 (40%), Positives = 238/424 (56%), Gaps = 69/424 (16%)
Query: 13 EGYRYYGFNALISNKLSLDRKIPDTRNSLCANQTFPSTLPSTSVIICFYNEHPATLYRSV 72
EGY+ Y FN L+S+++ RKI D+RN+ C++ T+ +LP+ S
Sbjct: 120 EGYKKYQFNGLLSDRIGSRRKIKDSRNARCSSLTYSDSLPAAS----------------- 162
Query: 73 QTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRARM 132
I+V F+E PS L RM
Sbjct: 163 ---------------IVVCYFNESPSVL-----------------------------IRM 178
Query: 133 FGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNN-GRVHLYRTSKREGL 191
+ + K LHEI+LV+D SE+ + ++ K + +V +T K EGL
Sbjct: 179 VNSIFDRTK---PEHLHEILLVDDSSEWSNATDEAIKYREKHIIQWEKVKFLKTDKNEGL 235
Query: 192 IRARMFGAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYT 251
IRA++FGA+ A G+VLVFLDSH EVN WL PLL I + V PIIDII+A T +Y
Sbjct: 236 IRAKIFGARRANGEVLVFLDSHCEVNEEWLPPLLDQIKQNRRRVVCPIIDIIDAITMKYV 295
Query: 252 SSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDA 311
S + GG NW + FKW+ + +++ P+ SPTMAGGLFAID++YF +G YD
Sbjct: 296 ESPVCTGGVNWAMTFKWDYPHRSYFEDPMNYVNPLKSPTMAGGLFAIDKEYFFEIGSYDE 355
Query: 312 GLEIWGGENLELSFRIWMCGGSLAMIPCSRIGHVFRSRRPYNNGHNEDPLTRNSLRVAHV 371
G+++WG EN+E+S RIW CGG L ++PCSR+GH+FR +RPY G D + +NS+R+A V
Sbjct: 356 GMDVWGAENVEISVRIWTCGGELLIMPCSRVGHIFRRQRPY--GIKTDSMGKNSVRLARV 413
Query: 372 WMDEYIEHFLKQRPEARNI-DYGDVTDRKQLRARLGCKSFKWYLDNVYPEMILPSDDEER 430
W+DEY+E+F + RP R DYGD+T R LR L CK FKWYL+N+YPE+ LP + +
Sbjct: 414 WLDEYLENFFEARPNYRTFTDYGDLTSRISLRRNLQCKPFKWYLENIYPEL-LPDNTPNQ 472
Query: 431 LKKK 434
L +
Sbjct: 473 LNNQ 476
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May catalyze the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. Caenorhabditis elegans (taxid: 6239) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|Q9JJ61|GLTL1_MOUSE Putative polypeptide N-acetylgalactosaminyltransferase-like protein 1 OS=Mus musculus GN=Galntl1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 302 bits (774), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 173/425 (40%), Positives = 228/425 (53%), Gaps = 75/425 (17%)
Query: 3 LNEQDLITRDEGYRYYGFNALISNKLSLDRKIPDTRNSLCANQTFPSTLPSTSVIICFYN 62
L+ + L ++ YR + FN L S+KLS DR I DTR+ C + ++ S L
Sbjct: 74 LSAKQLKPGEDPYRQHAFNQLESDKLSSDRPIRDTRHYSCPSLSYSSDL----------- 122
Query: 63 EHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTS 122
PAT + N+ R L RT
Sbjct: 123 --PAT-------------------------------------SVIITFHNEARSTLLRTV 143
Query: 123 KREGLIRARMFGAKYATGKNRI-QSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVH 181
K + NR SL+ EIILV+DFS P E + +V
Sbjct: 144 K---------------SVLNRTPASLIQEIILVDDFSSDP-------EDCLLLTRIPKVK 181
Query: 182 LYRTSKREGLIRARMFGAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIID 241
R KREGLIR+R+ GA A VL FLDSH EVN WL+P+L + E V PIID
Sbjct: 182 CLRNDKREGLIRSRVRGADVAGATVLTFLDSHCEVNVEWLQPMLQRVMEDHTRVVSPIID 241
Query: 242 IINADTFQY-TSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDR 300
+I+ D F Y +SA +RGGF+W LHFKWE +P + D KPI +P +AGG+F ID+
Sbjct: 242 VISLDNFAYLAASADLRGGFDWSLHFKWEQIPLEQKMTRTDPTKPIRTPVIAGGIFVIDK 301
Query: 301 QYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGHVFRSRRPYNNGH-NED 359
+F+ LG+YDA ++IWGGEN ELSFR+WMCGGSL ++PCSR+GHVFR R PYN N
Sbjct: 302 SWFNHLGKYDAQMDIWGGENFELSFRVWMCGGSLEIVPCSRVGHVFRKRHPYNFPEGNAL 361
Query: 360 PLTRNSLRVAHVWMDEYIEHFLKQRPEARNIDYGDVTDRKQLRARLGCKSFKWYLDNVYP 419
RN+ R A VWMDEY +++ + RP A +G V R + R ++ CKSF+WYL+NVYP
Sbjct: 362 TYIRNTKRTAEVWMDEYKQYYYEARPSAIGKAFGSVATRIEQRKKMDCKSFRWYLENVYP 421
Query: 420 EMILP 424
E+ +P
Sbjct: 422 ELTVP 426
|
May catalyze the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. Mus musculus (taxid: 10090) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|P34678|GALT3_CAEEL Polypeptide N-acetylgalactosaminyltransferase 3 OS=Caenorhabditis elegans GN=gly-3 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 301 bits (771), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 149/283 (52%), Positives = 196/283 (69%), Gaps = 5/283 (1%)
Query: 147 LLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKV 206
LL EIILV+D S+ L ++S++K + +HL R GLIRAR+ G++ A GK+
Sbjct: 201 LLEEIILVDDKSDR-DYLVKPLDSYIK-MFPIPIHLVHLENRSGLIRARLTGSEMAKGKI 258
Query: 207 LVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQY-TSSALVRGGFNWGLH 265
L+FLD+H+EV WLEPL+ +AE V PIID+I+ DTF+Y T+S GGFNW L+
Sbjct: 259 LLFLDAHVEVTDGWLEPLVSRVAEDRKRVVAPIIDVISDDTFEYVTASETTWGGFNWHLN 318
Query: 266 FKWENLPKGTLNS-SEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELS 324
F+W +PK LN D PI +PT+AGGLFAID+Q+F +G YD G+++WGGENLE+S
Sbjct: 319 FRWYAVPKRELNRRGSDRSMPIQTPTIAGGLFAIDKQFFYDIGSYDEGMQVWGGENLEIS 378
Query: 325 FRIWMCGGSLAMIPCSRIGHVFRSRRPYN-NGHNEDPLTRNSLRVAHVWMDEYIEHFLKQ 383
FR+WMCGGSL + PCSR+GHVFR + PY G + N+ R A VWMDEY F K
Sbjct: 379 FRVWMCGGSLEIHPCSRVGHVFRKQTPYTFPGGTAKVIHHNAARTAEVWMDEYKAFFYKM 438
Query: 384 RPEARNIDYGDVTDRKQLRARLGCKSFKWYLDNVYPEMILPSD 426
P ARN++ GDV++RK+LR L CKSFKWYL+N+YPE LP+D
Sbjct: 439 VPAARNVEAGDVSERKKLRETLQCKSFKWYLENIYPEAPLPAD 481
|
Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. Caenorhabditis elegans (taxid: 6239) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|Q8BVG5|GLT14_MOUSE Polypeptide N-acetylgalactosaminyltransferase 14 OS=Mus musculus GN=Galnt14 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 298 bits (762), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 168/426 (39%), Positives = 226/426 (53%), Gaps = 73/426 (17%)
Query: 3 LNEQDLITRDEGYRYYGFNALISNKLSLDRKIPDTRNSLCANQTFPSTLPSTSVIICFYN 62
LN + D+ Y+ Y FN S ++S +R +PDTR+ C+ + + LP TS+II F+
Sbjct: 62 LNAKKWRVGDDPYKLYAFNQRESERISSNRAVPDTRHKRCSLLVYCTDLPPTSIIITFH- 120
Query: 63 EHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTS 122
N+ R L RT
Sbjct: 121 -------------------------------------------------NEARSTLLRTI 131
Query: 123 KREGLIRARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHL 182
R L R M L+ EIILV+DFS P E + + +V
Sbjct: 132 -RSVLNRTPM-------------HLIQEIILVDDFSNDP-------EDCKQLIKLPKVKC 170
Query: 183 YRTSKREGLIRARMFGAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDI 242
R ++R+GL+R+RM GA A G L FLDSH EVN WL+PLL + E V P+IDI
Sbjct: 171 LRNNERQGLVRSRMRGADIAQGTTLTFLDSHCEVNRDWLQPLLHRVKEDYTRVVCPVIDI 230
Query: 243 INADTFQYTSSAL-VRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQ 301
IN DTF Y SA +RGGF+W LHF+WE L D +PI +P +AGGLF ID+
Sbjct: 231 INLDTFNYIESASELRGGFDWSLHFQWEQLSLEQKALRLDPTEPIRTPIIAGGLFVIDKA 290
Query: 302 YFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGHVFRSRRPYN-NGHNEDP 360
+FD LG+YD ++IWGGEN E+SFR+WMCGG L +IPCSR+GHVFR + PY N +
Sbjct: 291 WFDYLGKYDVDMDIWGGENFEISFRVWMCGGGLEIIPCSRVGHVFRKKHPYVFPDGNANT 350
Query: 361 LTRNSLRVAHVWMDEYIEHFLKQRPEARNIDYGDVTDRKQLRARLGCKSFKWYLDNVYPE 420
+N+ R A VWMDEY +++ RP A +G++ +R LR L C++FKW L+NVYPE
Sbjct: 351 YIKNTKRTAEVWMDEYKQYYYAARPFALERPFGNIENRLNLRKNLHCQTFKWNLENVYPE 410
Query: 421 MILPSD 426
+ +P D
Sbjct: 411 LRVPPD 416
|
Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. Displays activity toward mucin-derived peptide substrates such as Muc2, Muc5AC, Muc7, and Muc13 (-58). May be involved in O-glycosylation in kidney. Mus musculus (taxid: 10090) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|Q96FL9|GLT14_HUMAN Polypeptide N-acetylgalactosaminyltransferase 14 OS=Homo sapiens GN=GALNT14 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 298 bits (762), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 167/426 (39%), Positives = 227/426 (53%), Gaps = 73/426 (17%)
Query: 3 LNEQDLITRDEGYRYYGFNALISNKLSLDRKIPDTRNSLCANQTFPSTLPSTSVIICFYN 62
LN + D+ Y+ Y FN S ++S +R IPDTR+ C + + LP TS+II
Sbjct: 62 LNAKKWRVGDDPYKLYAFNQRESERISSNRAIPDTRHLRCTLLVYCTDLPPTSIII---- 117
Query: 63 EHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTS 122
T + ++ L RT +S+ LN HL R
Sbjct: 118 ----TFHNEARSTLLRTIRSV---------------------------LNRTPTHLIR-- 144
Query: 123 KREGLIRARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHL 182
EIILV+DFS P + ++ +V
Sbjct: 145 ---------------------------EIILVDDFSNDPDDCKQLIKL-------PKVKC 170
Query: 183 YRTSKREGLIRARMFGAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDI 242
R ++R+GL+R+R+ GA A G L FLDSH EVN WL+PLL + E V P+IDI
Sbjct: 171 LRNNERQGLVRSRIRGADIAQGTTLTFLDSHCEVNRDWLQPLLHRVKEDYTRVVCPVIDI 230
Query: 243 INADTFQYTSSAL-VRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQ 301
IN DTF Y SA +RGGF+W LHF+WE L D +PI +P +AGGLF ID+
Sbjct: 231 INLDTFTYIESASELRGGFDWSLHFQWEQLSPEQKARRLDPTEPIRTPIIAGGLFVIDKA 290
Query: 302 YFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGHVFRSRRPYN-NGHNEDP 360
+FD LG+YD ++IWGGEN E+SFR+WMCGGSL ++PCSR+GHVFR + PY N +
Sbjct: 291 WFDYLGKYDMDMDIWGGENFEISFRVWMCGGSLEIVPCSRVGHVFRKKHPYVFPDGNANT 350
Query: 361 LTRNSLRVAHVWMDEYIEHFLKQRPEARNIDYGDVTDRKQLRARLGCKSFKWYLDNVYPE 420
+N+ R A VWMDEY +++ RP A +G+V R LR L C+SFKWYL+N+YPE
Sbjct: 351 YIKNTKRTAEVWMDEYKQYYYAARPFALERPFGNVESRLDLRKNLRCQSFKWYLENIYPE 410
Query: 421 MILPSD 426
+ +P +
Sbjct: 411 LSIPKE 416
|
Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. Displays activity toward mucin-derived peptide substrates such as Muc2, Muc5AC, Muc7, and Muc13 (-58). May be involved in O-glycosylation in kidney. Homo sapiens (taxid: 9606) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 4 EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 867 | ||||||
| 170065987 | 639 | N-acetylgalactosaminyltransferase [Culex | 0.535 | 0.726 | 0.432 | 1e-125 | |
| 332021082 | 580 | Polypeptide N-acetylgalactosaminyltransf | 0.568 | 0.85 | 0.435 | 1e-123 | |
| 328700065 | 588 | PREDICTED: polypeptide N-acetylgalactosa | 0.448 | 0.661 | 0.489 | 1e-122 | |
| 340727930 | 643 | PREDICTED: polypeptide N-acetylgalactosa | 0.357 | 0.482 | 0.636 | 1e-121 | |
| 350400046 | 643 | PREDICTED: polypeptide N-acetylgalactosa | 0.357 | 0.482 | 0.627 | 1e-120 | |
| 156544564 | 637 | PREDICTED: polypeptide N-acetylgalactosa | 0.356 | 0.485 | 0.642 | 1e-120 | |
| 242020636 | 623 | UDP-GalNAc:polypeptide N-acetylgalactosa | 0.359 | 0.500 | 0.638 | 1e-120 | |
| 307198758 | 606 | Polypeptide N-acetylgalactosaminyltransf | 0.450 | 0.645 | 0.481 | 1e-119 | |
| 307186272 | 667 | Polypeptide N-acetylgalactosaminyltransf | 0.357 | 0.464 | 0.630 | 1e-118 | |
| 383862333 | 637 | PREDICTED: polypeptide N-acetylgalactosa | 0.449 | 0.612 | 0.492 | 1e-117 |
| >gi|170065987|ref|XP_001868085.1| N-acetylgalactosaminyltransferase [Culex quinquefasciatus] gi|167862691|gb|EDS26074.1| N-acetylgalactosaminyltransferase [Culex quinquefasciatus] | Back alignment and taxonomy information |
|---|
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 255/590 (43%), Positives = 332/590 (56%), Gaps = 126/590 (21%)
Query: 1 MVLNEQDLITRDEGYRYYGFNALISNKLSLDRKIPDTRNSLCANQTFPSTLPSTSVIICF 60
MV N ++ RD GYR + FN L+S+K+ R++PDTR+ LC Q++ LPS S+I+CF
Sbjct: 123 MVRNSEEQFIRDVGYRKHAFNVLVSSKIGPFREVPDTRHKLCPEQSYDKVLPSASIIMCF 182
Query: 61 YNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYR 120
YNEH +QTLL R+ S+L GR Y
Sbjct: 183 YNEH-------LQTLL-RSVNSVL-----------------------------GRTPAY- 204
Query: 121 TSKREGLIRARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRV 180
LLHEIILV+D S++ +L ++E +K NN ++
Sbjct: 205 --------------------------LLHEIILVDDCSDF-DDLGDDLEVGLKKFNNSKI 237
Query: 181 HLYRTSKREGLIRARMFGAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPII 240
L R REGL+R+R++GA+ ATG VLVFLDSHIEVN W+EPLL I + +P+I
Sbjct: 238 RLIRNRDREGLMRSRVYGARNATGDVLVFLDSHIEVNVDWIEPLLQRIKVNRTILAMPVI 297
Query: 241 DIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDR 300
DIIN+DTF YTSS LVRGGFNWGLHFKW+NLPKG+L DF+ P SPTMAGGLFA+DR
Sbjct: 298 DIINSDTFAYTSSPLVRGGFNWGLHFKWDNLPKGSLAKETDFVGPFQSPTMAGGLFAMDR 357
Query: 301 QYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGHVFRSRRPYNNGHNEDP 360
+YF LG+YD G+++WGGENLE+SFR W CGGS+ ++PCSRIGHVFR RRPY + D
Sbjct: 358 KYFKELGEYDMGMDVWGGENLEISFRAWQCGGSIELLPCSRIGHVFRKRRPYGSPDGTDT 417
Query: 361 LTRNSLRVAHVWMDEYIEHFLKQRPEARNIDYGDVTDRKQLRARLGCKSFKWYLDNVYPE 420
+ RNSLR+A VWMD+YI++F + +P A +D GD+++R++LR RL CKSF+WYL N+YP+
Sbjct: 418 MIRNSLRLARVWMDDYIKYFFENQPHANKLDAGDLSERQELRNRLNCKSFEWYLKNIYPQ 477
Query: 421 MILPSDDEERLKKKWAQVEQPKFQPWYSRARNYTNSLRVAHVWMDEYIEHFLKQRPEARN 480
+ LP + K A V QPKFQPW+SR RNY +
Sbjct: 478 LRLPGE-----KTTDANVSQPKFQPWHSRKRNYVS------------------------- 507
Query: 481 IDYGDVTDRKQLRARLGCKSFKWYLDNVYPEMILPSDDEERLKKKWAQ-VEQP----KFQ 535
SF+ L N M S E+ L KK + V QP K Q
Sbjct: 508 -------------------SFQIRLSNSSLCMTTESTKEKSLWKKGSHLVLQPCLRVKTQ 548
Query: 536 PWYSRARNYTSHFHIRLSSTDLCLTSKVDKTKGSPLVLKKCDELSKTQHW 585
WY T + L LCL + TKG+P+ L KC E+ Q W
Sbjct: 549 MWYE-----TEKAELVLGQL-LCLEAPSSATKGTPM-LNKCHEMGGDQAW 591
|
Source: Culex quinquefasciatus Species: Culex quinquefasciatus Genus: Culex Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|332021082|gb|EGI61469.1| Polypeptide N-acetylgalactosaminyltransferase 35A [Acromyrmex echinatior] | Back alignment and taxonomy information |
|---|
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 253/581 (43%), Positives = 340/581 (58%), Gaps = 88/581 (15%)
Query: 1 MVLNEQDLITRDEGYRYYGFNALISNKLSLDRKIPDTRNSLCANQTFPSTLPSTSVIICF 60
MV N +D RDEGY+ Y FN LIS+ L + R I P T +C
Sbjct: 60 MVKNLEDQRKRDEGYKDYAFNILISDNLGVQRNI-----------------PDTRHKLCK 102
Query: 61 YNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYR 120
++PA L + I++ ++E+ + L + + ++
Sbjct: 103 MQKYPANLPNAS---------------IIICFYNEHYTTLLRSLHSILE----------- 136
Query: 121 TSKREGLIRARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRV 180
K T LLHEIILVND+S+ LH ++ +++ N RV
Sbjct: 137 ---------------KTPT------VLLHEIILVNDYSD-SDTLHENIKVYIRNNFNDRV 174
Query: 181 HLYRTSKREGLIRARMFGAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPII 240
L++T +REGLIRAR+FGA+ ATGKVL+FLDSHIEVN W+EPLL IA N + +P+I
Sbjct: 175 RLFKTERREGLIRARVFGARKATGKVLIFLDSHIEVNEIWIEPLLSRIAYSRNIIPMPVI 234
Query: 241 DIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDR 300
DIINADTFQYT S LVRGGFNWGLHFKW+NLP GTLN DF+KPI SPTMAGGLFAIDR
Sbjct: 235 DIINADTFQYTGSPLVRGGFNWGLHFKWDNLPIGTLNHDVDFVKPIKSPTMAGGLFAIDR 294
Query: 301 QYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGHVFRSRRPYNNGHNEDP 360
+YF +G+YD G++IWGGENLE+SFRIWMCGGS+ +IPCSR+GHVFR RRPY + +D
Sbjct: 295 EYFTKMGEYDIGMDIWGGENLEISFRIWMCGGSIELIPCSRVGHVFRRRRPYGSDDPQDT 354
Query: 361 LTRNSLRVAHVWMDEYIEHFLKQRPEARNIDYGDVTDRKQLRARLGCKSFKWYLDNVYPE 420
+ +NSLRVAHVWMDEY ++FLK A+ IDYGD+++R LR +L CK+F WYL VYPE
Sbjct: 355 MLKNSLRVAHVWMDEYKDYFLKN---AKTIDYGDISERLALRQKLKCKTFGWYLKVVYPE 411
Query: 421 MILPSDDEERLKKKWAQVEQPKFQPWYSRARNYTN--SLRVAHVWMDEYIEHFLKQRPEA 478
+ LP D E RLK KWA+++Q QPW+SR RNYT+ +R+++ + E +K +
Sbjct: 412 LTLPDDTERRLKDKWAKLDQRPMQPWHSRKRNYTDQYQIRLSNTALCIQSEKDIKTK--- 468
Query: 479 RNIDYGDVTDRKQLRARLGCKSFKWY---LDNVYPEMILPSDDEERLKKKWAQVEQPKFQ 535
+ L L KS WY + + +L + E++ K E Q
Sbjct: 469 --------GSKLILMPCLRVKSQMWYETDKNELVLGQMLCMEGAEKIPKLGKCHEMGGSQ 520
Query: 536 PWYSRARNYTSHFHIRLSSTDLCLTSKVDKTKGSPLVLKKC 576
W + N T +++ +T CL D + +PL++ C
Sbjct: 521 DWRHKRINATPIYNM---ATGTCLGVMRD-VRNTPLIMDLC 557
|
Source: Acromyrmex echinatior Species: Acromyrmex echinatior Genus: Acromyrmex Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|328700065|ref|XP_003241139.1| PREDICTED: polypeptide N-acetylgalactosaminyltransferase 35A-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 223/456 (48%), Positives = 305/456 (66%), Gaps = 67/456 (14%)
Query: 1 MVLNEQDLITRDEGYRYYGFNALISNKLSLDRK-IPDTRNSLCANQTFPSTLPSTSVIIC 59
++ + D+ TRD+GY+ +GFNAL+S +L R+ +PDTR+ LC+ + LPS S+IIC
Sbjct: 72 IIKTDDDMATRDKGYKDHGFNALVSLRLGNYRETLPDTRHKLCSTIKYDQNLPSASIIIC 131
Query: 60 FYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLY 119
FYN E+P L +++ ++
Sbjct: 132 FYN--------------------------------EHPQALFRTIQSVIR---------- 149
Query: 120 RTSKREGLIRARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKG-LNNG 178
RT ++ LLHE+IL+ND+S+ NLH V+ ++ + G
Sbjct: 150 RTPRK----------------------LLHEVILINDYSD-SENLHKIVDQYINDEILQG 186
Query: 179 RVHLYRTSKREGLIRARMFGAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVP 238
VHL +T+KREGLIRAR+FGA ATG+VL+FLDSH+EVNT W++PLL + + + P
Sbjct: 187 IVHLKKTNKREGLIRARLFGANLATGQVLIFLDSHVEVNTDWIQPLLTRVRDNRTQIIAP 246
Query: 239 IIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMAGGLFAI 298
IIDII DTF Y SS LVRGGFNWGLHFKW++LPKGTL + +DF+KPI +PT+AGGLFA+
Sbjct: 247 IIDIIQPDTFDYKSSPLVRGGFNWGLHFKWDSLPKGTLVTDKDFVKPIKTPTIAGGLFAV 306
Query: 299 DRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGHVFRSRRPYNNGHNE 358
DR+YF+ +GQYD+G+ IWGGENLELSFR+WMCGGSL + PCSR+GHVFR RPY+ +NE
Sbjct: 307 DREYFNEIGQYDSGMNIWGGENLELSFRVWMCGGSLYIEPCSRVGHVFRQHRPYSAPNNE 366
Query: 359 DPLTRNSLRVAHVWMDEYIEHFLKQRPEARNIDYGDVTDRKQLRARLGCKSFKWYLDNVY 418
D + RNSLR+A+VWMD++ + F+ +R + +DYGDV++RK LR +LGC +F+WYL+NVY
Sbjct: 367 DTMARNSLRLANVWMDDFKKFFISKRMDLLRLDYGDVSERKALRTKLGCNNFEWYLENVY 426
Query: 419 PEMILPSDDEERLKKKWAQVEQPKFQPWYSRARNYT 454
PEM+LP+D+ +RL KK V++P FQPW R RNYT
Sbjct: 427 PEMLLPTDEADRLSKKLENVDKPIFQPWNKRIRNYT 462
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|340727930|ref|XP_003402286.1| PREDICTED: polypeptide N-acetylgalactosaminyltransferase 35A-like [Bombus terrestris] | Back alignment and taxonomy information |
|---|
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 200/314 (63%), Positives = 249/314 (79%), Gaps = 4/314 (1%)
Query: 146 SLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGK 205
SLLHEIILVND+S+ + LH ++++++ NG+V Y+T KREGLIRARMFGA+ ATG+
Sbjct: 204 SLLHEIILVNDWSDSKA-LHEKIKTYIVNNFNGKVKFYKTEKREGLIRARMFGARKATGE 262
Query: 206 VLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLH 265
VL+FLDSHIEVN W+EPLL IA+ V +PIIDIIN DTFQYT S LVRGGFNWGLH
Sbjct: 263 VLIFLDSHIEVNKRWIEPLLSQIAQSKTIVAMPIIDIINPDTFQYTGSPLVRGGFNWGLH 322
Query: 266 FKWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSF 325
FKW+N+P GT EDFIKPI SPTMAGGLFA+DR+YF LG+YDAG++IWGGENLE+SF
Sbjct: 323 FKWDNVPVGTFAHDEDFIKPIKSPTMAGGLFAMDRKYFTKLGEYDAGMDIWGGENLEISF 382
Query: 326 RIWMCGGSLAMIPCSRIGHVFRSRRPYNNGHNEDPLTRNSLRVAHVWMDEYIEHFLKQRP 385
RIWMCGGS+ +IPCSR+GHVFR RRPY D + +NSLRVAHVW+DEY ++FLK
Sbjct: 383 RIWMCGGSIELIPCSRVGHVFRRRRPYGTFDQHDTMLKNSLRVAHVWLDEYKDYFLKN-- 440
Query: 386 EARNIDYGDVTDRKQLRARLGCKSFKWYLDNVYPEMILPSDDEERLKKKWAQVEQPKFQP 445
+ +DYGD+++R LR RL CK+F WYL+ VYPE+ LP D++ RLK KWA++EQ QP
Sbjct: 441 -VQKVDYGDISERLNLRKRLKCKNFAWYLNVVYPELALPDDNKNRLKDKWAKIEQKPIQP 499
Query: 446 WYSRARNYTNSLRV 459
W+SR RNYT+ ++
Sbjct: 500 WHSRKRNYTDQYQI 513
|
Source: Bombus terrestris Species: Bombus terrestris Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|350400046|ref|XP_003485719.1| PREDICTED: polypeptide N-acetylgalactosaminyltransferase 35A-like [Bombus impatiens] | Back alignment and taxonomy information |
|---|
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 197/314 (62%), Positives = 248/314 (78%), Gaps = 4/314 (1%)
Query: 146 SLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGK 205
SLLHEIILVND+S+ + LH ++E+++ NG+V ++T KREGLIRARMFGA+ ATG+
Sbjct: 204 SLLHEIILVNDWSDSKA-LHEKIETYIANNFNGKVKFFKTEKREGLIRARMFGARKATGE 262
Query: 206 VLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLH 265
+L+FLDSHIEVN W+EPLL IA + +P+IDIIN DTFQYT S LVRGGFNWGLH
Sbjct: 263 ILIFLDSHIEVNKRWIEPLLSQIAHSKTIIAMPVIDIINPDTFQYTGSPLVRGGFNWGLH 322
Query: 266 FKWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSF 325
FKW+N+P GT EDFIKPI SPTMAGGLFA+DR+YF LG+YDAG++IWGGENLE+SF
Sbjct: 323 FKWDNVPVGTFAHDEDFIKPIKSPTMAGGLFAMDRKYFTKLGEYDAGMDIWGGENLEISF 382
Query: 326 RIWMCGGSLAMIPCSRIGHVFRSRRPYNNGHNEDPLTRNSLRVAHVWMDEYIEHFLKQRP 385
RIWMCGGS+ +IPCSR+GHVFR RRPY D + +NSLRVAHVW+DEY ++FLK
Sbjct: 383 RIWMCGGSIELIPCSRVGHVFRRRRPYGTFDQHDTMLKNSLRVAHVWLDEYKDYFLKN-- 440
Query: 386 EARNIDYGDVTDRKQLRARLGCKSFKWYLDNVYPEMILPSDDEERLKKKWAQVEQPKFQP 445
+ +DYGD+++R LR RL CK+F WYL+ VYPE+ LP D++ RLK KWA++EQ QP
Sbjct: 441 -VQKVDYGDISERLNLRKRLKCKNFAWYLNVVYPELALPDDNKNRLKDKWAKIEQKPIQP 499
Query: 446 WYSRARNYTNSLRV 459
W+SR RNYT+ ++
Sbjct: 500 WHSRKRNYTDQYQI 513
|
Source: Bombus impatiens Species: Bombus impatiens Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|156544564|ref|XP_001602677.1| PREDICTED: polypeptide N-acetylgalactosaminyltransferase 35A-like [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 201/313 (64%), Positives = 250/313 (79%), Gaps = 4/313 (1%)
Query: 147 LLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKV 206
LLHEIIL+NDFS+ S LH +V +VK + +V YRT +REGLIRARMFGAK ATG+V
Sbjct: 203 LLHEIILINDFSDSKS-LHEQVRDYVKQNFDNKVKYYRTERREGLIRARMFGAKKATGEV 261
Query: 207 LVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLHF 266
LVFLDSHIEVN WLEPLL I+ V +P+IDIINADTFQY+SS LVRGGFNWGLHF
Sbjct: 262 LVFLDSHIEVNKMWLEPLLARISHSRTIVPMPVIDIINADTFQYSSSPLVRGGFNWGLHF 321
Query: 267 KWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFR 326
KW++LP GTL+ +DF+KPI SPTMAGGLFA+DR+YF LG+YDAG+++WGGENLE+SFR
Sbjct: 322 KWDSLPIGTLSLEQDFVKPIKSPTMAGGLFAMDRKYFFELGEYDAGMDVWGGENLEISFR 381
Query: 327 IWMCGGSLAMIPCSRIGHVFRSRRPYNNGHNEDPLTRNSLRVAHVWMDEYIEHFLKQRPE 386
IWMCGGS+ +IPCSR+GHVFR RRPY +D + +NSLRVA+VWMD+Y ++FLK
Sbjct: 382 IWMCGGSIELIPCSRVGHVFRRRRPYGGNDQQDTMLKNSLRVAYVWMDQYKKYFLKN--- 438
Query: 387 ARNIDYGDVTDRKQLRARLGCKSFKWYLDNVYPEMILPSDDEERLKKKWAQVEQPKFQPW 446
+ IDYGD+T+R+QLR +L CK F WYL++VYPE+ LP D+ E +K KW++V Q QPW
Sbjct: 439 VKKIDYGDITERQQLRQKLHCKDFAWYLEHVYPELTLPDDNPELMKSKWSKVNQKLIQPW 498
Query: 447 YSRARNYTNSLRV 459
+SR RNYTN ++
Sbjct: 499 HSRKRNYTNEYQI 511
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|242020636|ref|XP_002430758.1| UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase, putative [Pediculus humanus corporis] gi|212515955|gb|EEB18020.1| UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase, putative [Pediculus humanus corporis] | Back alignment and taxonomy information |
|---|
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 200/313 (63%), Positives = 248/313 (79%), Gaps = 1/313 (0%)
Query: 147 LLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKV 206
LL EIILVNDFS+ + LH + ++V +V L+++ KR GLIRAR+FG++ A+G V
Sbjct: 189 LLKEIILVNDFSDL-AGLHRNISNYVNTNFTDKVKLFKSKKRLGLIRARIFGSRKASGDV 247
Query: 207 LVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLHF 266
LVFLDSHIEVN +WL+PLL I + V VPIIDIINADTF+Y+SS LVRGGFNWGLHF
Sbjct: 248 LVFLDSHIEVNVNWLQPLLSRIVDSKKNVVVPIIDIINADTFKYSSSPLVRGGFNWGLHF 307
Query: 267 KWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFR 326
KWENLPK TL S+EDF+KPILSPTMAGGLFAI+R YF LG+YD G+ IWGGENLE+SFR
Sbjct: 308 KWENLPKSTLKSNEDFVKPILSPTMAGGLFAINRAYFKELGEYDNGMNIWGGENLEISFR 367
Query: 327 IWMCGGSLAMIPCSRIGHVFRSRRPYNNGHNEDPLTRNSLRVAHVWMDEYIEHFLKQRPE 386
IWMCGG+L +IPCSR+GHVFR RRPY + + ED + RNSLRVA+VWMD+Y E F KQ PE
Sbjct: 368 IWMCGGNLELIPCSRVGHVFRKRRPYGSPNGEDTMMRNSLRVANVWMDDYKEFFYKQHPE 427
Query: 387 ARNIDYGDVTDRKQLRARLGCKSFKWYLDNVYPEMILPSDDEERLKKKWAQVEQPKFQPW 446
+ +GD++DR +LR +L C SF+WYL N+YPE+ILPSD+E++ K KW +EQ KFQPW
Sbjct: 428 GKTFPFGDISDRLKLRKKLHCHSFEWYLQNIYPELILPSDNEQKSKIKWNALEQQKFQPW 487
Query: 447 YSRARNYTNSLRV 459
+ R RNYT ++
Sbjct: 488 HLRKRNYTAQFQL 500
|
Source: Pediculus humanus corporis Species: Pediculus humanus Genus: Pediculus Family: Pediculidae Order: Phthiraptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307198758|gb|EFN79561.1| Polypeptide N-acetylgalactosaminyltransferase 35A [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
Score = 437 bits (1125), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/459 (48%), Positives = 291/459 (63%), Gaps = 68/459 (14%)
Query: 1 MVLNEQDLITRDEGYRYYGFNALISNKLSLDRKIPDTRNSLCANQTFPSTLPSTSVIICF 60
MV N D RDEGY+ Y FN LIS+ L + R TLP T +C
Sbjct: 86 MVKNLDDQRKRDEGYKNYSFNVLISDNLGVLR-----------------TLPDTRHKLCR 128
Query: 61 YNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYR 120
++P L + I++ ++E+ L + + +
Sbjct: 129 ARKYPTNLPNAS---------------IIICFYNEHYMTLLRSLHSIID----------- 162
Query: 121 TSKREGLIRARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRV 180
K T SLLHEIILVND+S+ + LH +++ ++ + +V
Sbjct: 163 ---------------KTPT------SLLHEIILVNDYSD-SNILHEKIKVYITNNFDAKV 200
Query: 181 HLYRTSKREGLIRARMFGAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPII 240
++T KREGLIRAR+FGA+ ATG VL+FLDSHIEVN W+EPLL IA V +P+I
Sbjct: 201 QFFKTDKREGLIRARVFGARKATGDVLIFLDSHIEVNEVWIEPLLSRIAHSKTIVAMPVI 260
Query: 241 DIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDR 300
DIINADTFQYT S LVRGGFNWGLHFKW+NLP GTL +DF+KPI SPTMAGGLFAIDR
Sbjct: 261 DIINADTFQYTGSPLVRGGFNWGLHFKWDNLPIGTLKQEDDFVKPIKSPTMAGGLFAIDR 320
Query: 301 QYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGHVFRSRRPYNNGHNEDP 360
+YF +G+YD G+++WGGENLE+SFRIWMCGG++ +IPCSR+GHVFR RRPY + +D
Sbjct: 321 EYFTKIGEYDTGMDVWGGENLEISFRIWMCGGNIELIPCSRVGHVFRRRRPYGSDDPQDT 380
Query: 361 LTRNSLRVAHVWMDEYIEHFLKQRPEARNIDYGDVTDRKQLRARLGCKSFKWYLDNVYPE 420
+ +NSLRVAHVW+DEY ++FL+ R ID+GD+++R+ LR RL CK+F WYL VYPE
Sbjct: 381 MLKNSLRVAHVWLDEYKDYFLRN---VRKIDFGDISERQALRQRLKCKTFGWYLKVVYPE 437
Query: 421 MILPSDDEERLKKKWAQVEQPKFQPWYSRARNYTNSLRV 459
+ LP D E RLK KW++++Q QPW+SR RNYT+ ++
Sbjct: 438 LTLPDDTERRLKDKWSKLDQRPVQPWHSRKRNYTDQYQI 476
|
Source: Harpegnathos saltator Species: Harpegnathos saltator Genus: Harpegnathos Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307186272|gb|EFN71935.1| Polypeptide N-acetylgalactosaminyltransferase 35A [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 198/314 (63%), Positives = 246/314 (78%), Gaps = 4/314 (1%)
Query: 146 SLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGK 205
+LLHEIILVNDFS+ LH ++ +++K +V L++T KREGLIRAR+FGA+ ATG
Sbjct: 228 ALLHEIILVNDFSD-SDILHEKIHAYIKNNFGAKVRLFKTKKREGLIRARVFGARKATGD 286
Query: 206 VLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLH 265
VL+FLDSHIEVN W+EPLL IA V +P+IDIINADTFQYT S LVRGGFNWGLH
Sbjct: 287 VLIFLDSHIEVNEIWIEPLLSRIAYSKTIVPMPVIDIINADTFQYTGSPLVRGGFNWGLH 346
Query: 266 FKWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSF 325
FKW+NLP GTL DF+KPI SPTMAGGLFAIDR+YF +G+YD G+++WGGENLE+SF
Sbjct: 347 FKWDNLPIGTLKHENDFVKPIKSPTMAGGLFAIDREYFIKIGEYDTGMDVWGGENLEISF 406
Query: 326 RIWMCGGSLAMIPCSRIGHVFRSRRPYNNGHNEDPLTRNSLRVAHVWMDEYIEHFLKQRP 385
RIWMCGGS+ +IPCSR+GHVFR RRPY + D + +NSLRVAHVWMDEY ++FLK
Sbjct: 407 RIWMCGGSIELIPCSRVGHVFRRRRPYGSDDPHDTMLKNSLRVAHVWMDEYKDYFLKN-- 464
Query: 386 EARNIDYGDVTDRKQLRARLGCKSFKWYLDNVYPEMILPSDDEERLKKKWAQVEQPKFQP 445
A+ IDYGD+++R LR +L CK+F WYL VYPE+ LP D E+RLK KW+++EQ QP
Sbjct: 465 -AKAIDYGDISERLALRQKLECKTFDWYLKVVYPELTLPDDTEKRLKDKWSKLEQRPMQP 523
Query: 446 WYSRARNYTNSLRV 459
W+SR RNYT+ ++
Sbjct: 524 WHSRKRNYTDQYQI 537
|
Source: Camponotus floridanus Species: Camponotus floridanus Genus: Camponotus Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383862333|ref|XP_003706638.1| PREDICTED: polypeptide N-acetylgalactosaminyltransferase 35A-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/459 (49%), Positives = 292/459 (63%), Gaps = 69/459 (15%)
Query: 1 MVLNEQDLITRDEGYRYYGFNALISNKLSLDRKIPDTRNSLCANQTFPSTLPSTSVIICF 60
M+ N D R+EGY+ Y FN LIS+ + LDRK+PDTR+ L C
Sbjct: 118 MIKNLDDQRKREEGYKNYAFNVLISDNIGLDRKLPDTRHKL-----------------CQ 160
Query: 61 YNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYR 120
++P L + I++ ++E+ L + + ++ R
Sbjct: 161 MQQYPNKLPNAS---------------IVICFYNEHYMTLLRSIHSIIE----------R 195
Query: 121 TSKREGLIRARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRV 180
T K LLHEIILVND+S+ LH ++++F+ + +V
Sbjct: 196 TPKH----------------------LLHEIILVNDWSD-SKELHEKIKAFINNNFDRKV 232
Query: 181 HLYRTSKREGLIRARMFGAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPII 240
++T KREGLIRARMFGA+ ATG+VL+FLDSHIEVN W+EPLL IA V +P+I
Sbjct: 233 KFFKTEKREGLIRARMFGARKATGEVLIFLDSHIEVNKMWIEPLLSRIAHSKTIVAMPVI 292
Query: 241 DIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDR 300
DIINADTFQYT+S LVRGGFNWGLHFKWE LP L EDFIKPI SPTMAGGLFA+DR
Sbjct: 293 DIINADTFQYTASPLVRGGFNWGLHFKWEQLPT-KLVHDEDFIKPIKSPTMAGGLFAMDR 351
Query: 301 QYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGHVFRSRRPYNNGHNEDP 360
+YF LG+YDAG+++WGGENLE+SFRIWMCGGS+ +IPCSR+GHVFR RRPY D
Sbjct: 352 EYFVELGEYDAGMDVWGGENLEISFRIWMCGGSIELIPCSRVGHVFRKRRPYGADDKHDT 411
Query: 361 LTRNSLRVAHVWMDEYIEHFLKQRPEARNIDYGDVTDRKQLRARLGCKSFKWYLDNVYPE 420
+ +NSLRVA+VW+DEY ++LK + IDYGD+TDR LR +L CK F WY+ VYPE
Sbjct: 412 MLKNSLRVAYVWLDEYKHYYLK---DVNKIDYGDITDRLNLRQKLKCKDFAWYVKEVYPE 468
Query: 421 MILPSDDEERLKKKWAQVEQPKFQPWYSRARNYTNSLRV 459
+ P DD++RLK KWA++EQ QPW+SR RNYT+ ++
Sbjct: 469 LTFPDDDKKRLKDKWARIEQKPMQPWHSRKRNYTDQYQI 507
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 867 | ||||||
| UNIPROTKB|B7Z5G5 | 527 | GALNT11 "cDNA FLJ58212, highly | 0.316 | 0.519 | 0.610 | 1.1e-118 | |
| UNIPROTKB|Q8NCW6 | 608 | GALNT11 "Polypeptide N-acetylg | 0.316 | 0.450 | 0.610 | 1.1e-118 | |
| UNIPROTKB|F1P800 | 608 | GALNT11 "Uncharacterized prote | 0.316 | 0.450 | 0.610 | 2.2e-118 | |
| MGI|MGI:2444392 | 608 | Galnt11 "UDP-N-acetyl-alpha-D- | 0.319 | 0.455 | 0.589 | 8.6e-117 | |
| UNIPROTKB|E1BDW8 | 606 | GALNT11 "Uncharacterized prote | 0.316 | 0.452 | 0.6 | 8.6e-117 | |
| UNIPROTKB|E1BYU3 | 608 | GALNT11 "Uncharacterized prote | 0.316 | 0.450 | 0.629 | 2.9e-116 | |
| UNIPROTKB|F1SSN4 | 608 | GALNT11 "Uncharacterized prote | 0.316 | 0.450 | 0.592 | 7.7e-116 | |
| ZFIN|ZDB-GENE-060929-998 | 590 | galnt11 "UDP-N-acetyl-alpha-D- | 0.317 | 0.466 | 0.609 | 7.7e-116 | |
| FB|FBgn0001970 | 632 | Pgant35A "Polypeptide N-acetyl | 0.350 | 0.481 | 0.547 | 8.7e-98 | |
| RGD|735097 | 608 | Galnt11 "UDP-N-acetyl-alpha-D- | 0.359 | 0.513 | 0.555 | 2.7e-93 |
| UNIPROTKB|B7Z5G5 GALNT11 "cDNA FLJ58212, highly similar to PolypeptideN-acetylgalactosaminyltransferase 11 (EC 2.4.1.41)" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 940 (336.0 bits), Expect = 1.1e-118, Sum P(2) = 1.1e-118
Identities = 168/275 (61%), Positives = 214/275 (77%)
Query: 147 LLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKV 206
LLHEIILV+D S++ +L GE++ +V+ G++ + R +KREGLIR RM GA +ATG+V
Sbjct: 101 LLHEIILVDDDSDF-DDLKGELDEYVQKYLPGKIKVIRNTKREGLIRGRMIGAAHATGEV 159
Query: 207 LVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLHF 266
LVFLDSH EVN WL+PLL I E +TV P+IDII+ADT Y+SS +VRGGFNWGLHF
Sbjct: 160 LVFLDSHCEVNVMWLQPLLAAIREDRHTVVCPVIDIISADTLAYSSSPVVRGGFNWGLHF 219
Query: 267 KWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFR 326
KW+ +P L +E PI SPTMAGGLFA++RQYF LGQYD+G++IWGGENLE+SFR
Sbjct: 220 KWDLVPLSELGRAEGATAPIKSPTMAGGLFAMNRQYFHELGQYDSGMDIWGGENLEISFR 279
Query: 327 IWMCGGSLAMIPCSRIGHVFRSRRPYNNGHNEDPLTRNSLRVAHVWMDEYIEHFLKQRPE 386
IWMCGG L +IPCSR+GH+FR RRPY + +D +T NSLR+AHVW+DEY E + RP+
Sbjct: 280 IWMCGGKLFIIPCSRVGHIFRKRRPYGSPEGQDTMTHNSLRLAHVWLDEYKEQYFSLRPD 339
Query: 387 ARNIDYGDVTDRKQLRARLGCKSFKWYLDNVYPEM 421
+ YG++++R +LR +LGCKSFKWYLDNVYPEM
Sbjct: 340 LKTKSYGNISERVELRKKLGCKSFKWYLDNVYPEM 374
|
|
| UNIPROTKB|Q8NCW6 GALNT11 "Polypeptide N-acetylgalactosaminyltransferase 11" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 940 (336.0 bits), Expect = 1.1e-118, Sum P(2) = 1.1e-118
Identities = 168/275 (61%), Positives = 214/275 (77%)
Query: 147 LLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKV 206
LLHEIILV+D S++ +L GE++ +V+ G++ + R +KREGLIR RM GA +ATG+V
Sbjct: 182 LLHEIILVDDDSDF-DDLKGELDEYVQKYLPGKIKVIRNTKREGLIRGRMIGAAHATGEV 240
Query: 207 LVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLHF 266
LVFLDSH EVN WL+PLL I E +TV P+IDII+ADT Y+SS +VRGGFNWGLHF
Sbjct: 241 LVFLDSHCEVNVMWLQPLLAAIREDRHTVVCPVIDIISADTLAYSSSPVVRGGFNWGLHF 300
Query: 267 KWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFR 326
KW+ +P L +E PI SPTMAGGLFA++RQYF LGQYD+G++IWGGENLE+SFR
Sbjct: 301 KWDLVPLSELGRAEGATAPIKSPTMAGGLFAMNRQYFHELGQYDSGMDIWGGENLEISFR 360
Query: 327 IWMCGGSLAMIPCSRIGHVFRSRRPYNNGHNEDPLTRNSLRVAHVWMDEYIEHFLKQRPE 386
IWMCGG L +IPCSR+GH+FR RRPY + +D +T NSLR+AHVW+DEY E + RP+
Sbjct: 361 IWMCGGKLFIIPCSRVGHIFRKRRPYGSPEGQDTMTHNSLRLAHVWLDEYKEQYFSLRPD 420
Query: 387 ARNIDYGDVTDRKQLRARLGCKSFKWYLDNVYPEM 421
+ YG++++R +LR +LGCKSFKWYLDNVYPEM
Sbjct: 421 LKTKSYGNISERVELRKKLGCKSFKWYLDNVYPEM 455
|
|
| UNIPROTKB|F1P800 GALNT11 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 937 (334.9 bits), Expect = 2.2e-118, Sum P(2) = 2.2e-118
Identities = 168/275 (61%), Positives = 211/275 (76%)
Query: 147 LLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKV 206
LLHEIILV+D S++ +L GE+E +V+ G++ + R KREGLIR RM GA +ATG+V
Sbjct: 182 LLHEIILVDDDSDF-DDLKGELEEYVQKYLPGKIKVIRNIKREGLIRGRMIGAAHATGEV 240
Query: 207 LVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLHF 266
LVFLDSH EVN WL+PLL I E TV P+IDII+ADT Y+SS +VRGGFNWGLHF
Sbjct: 241 LVFLDSHCEVNVMWLQPLLAAIQEDQQTVVCPVIDIISADTLAYSSSPVVRGGFNWGLHF 300
Query: 267 KWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFR 326
KW+ +P L E PI SPTMAGGLFA++R YF+ LGQYD+G++IWGGENLE+SFR
Sbjct: 301 KWDLVPLSELGGPEGATAPIKSPTMAGGLFAMNRHYFNELGQYDSGMDIWGGENLEISFR 360
Query: 327 IWMCGGSLAMIPCSRIGHVFRSRRPYNNGHNEDPLTRNSLRVAHVWMDEYIEHFLKQRPE 386
IWMCGG L +IPCSR+GH+FR RRPY + +D +T NSLR+AHVW+DEY E + RP+
Sbjct: 361 IWMCGGKLFIIPCSRVGHIFRKRRPYGSPEGQDTMTHNSLRLAHVWLDEYKEQYFSLRPD 420
Query: 387 ARNIDYGDVTDRKQLRARLGCKSFKWYLDNVYPEM 421
R YG++++R +LR +LGCKSFKWYLDN+YPEM
Sbjct: 421 LRTKSYGNISERVELRKKLGCKSFKWYLDNIYPEM 455
|
|
| MGI|MGI:2444392 Galnt11 "UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 930 (332.4 bits), Expect = 8.6e-117, Sum P(2) = 8.6e-117
Identities = 164/278 (58%), Positives = 215/278 (77%)
Query: 147 LLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKV 206
LLHEIILV+D S++ +L GE++ +++ +V + R KREGLIR RM GA +ATG+V
Sbjct: 182 LLHEIILVDDSSDF-DDLKGELDEYIQRYLPAKVKVIRNMKREGLIRGRMIGAAHATGEV 240
Query: 207 LVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLHF 266
LVFLDSH EVN WL+PLL I E +TV P+IDII+ADT Y+SS +VRGGFNWGLHF
Sbjct: 241 LVFLDSHCEVNVMWLQPLLAIILEDPHTVVCPVIDIISADTLAYSSSPVVRGGFNWGLHF 300
Query: 267 KWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFR 326
KW+ +P L + PI SPTMAGGLFA++RQYF+ LGQYD+G++IWGGENLE+SFR
Sbjct: 301 KWDLVPVSELGGPDGATAPIRSPTMAGGLFAMNRQYFNDLGQYDSGMDIWGGENLEISFR 360
Query: 327 IWMCGGSLAMIPCSRIGHVFRSRRPYNNGHNEDPLTRNSLRVAHVWMDEYIEHFLKQRPE 386
IWMCGG L ++PCSR+GH+FR RRPY + +D +T NSLR+AHVW+DEY E + RP+
Sbjct: 361 IWMCGGKLFILPCSRVGHIFRKRRPYGSPEGQDTMTHNSLRLAHVWLDEYKEQYFSLRPD 420
Query: 387 ARNIDYGDVTDRKQLRARLGCKSFKWYLDNVYPEMILP 424
+N +G++++R +LR +LGC+SFKWYLDN+YPEM +P
Sbjct: 421 LKNKSFGNISERVELRKKLGCQSFKWYLDNIYPEMQIP 458
|
|
| UNIPROTKB|E1BDW8 GALNT11 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 927 (331.4 bits), Expect = 8.6e-117, Sum P(2) = 8.6e-117
Identities = 165/275 (60%), Positives = 211/275 (76%)
Query: 147 LLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKV 206
LLHEIILV+D S++ +L GE++ +++ G++ + R KREGLIR RM GA +ATG+V
Sbjct: 180 LLHEIILVDDDSDF-DDLKGELDEYIQKYLPGKIKVIRNPKREGLIRGRMIGAAHATGEV 238
Query: 207 LVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLHF 266
LVFLDSH EVN WL+PLL I E TV P+IDII+ADT Y+SS +VRGGFNWGLHF
Sbjct: 239 LVFLDSHCEVNVLWLQPLLAAIREDRRTVVCPVIDIISADTLAYSSSPVVRGGFNWGLHF 298
Query: 267 KWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFR 326
KW+ +P L E PI SPTMAGGLFA++R YF+ LGQYD+G++IWGGENLE+SFR
Sbjct: 299 KWDLVPLSELGGPEGATAPIKSPTMAGGLFAMNRNYFNELGQYDSGMDIWGGENLEISFR 358
Query: 327 IWMCGGSLAMIPCSRIGHVFRSRRPYNNGHNEDPLTRNSLRVAHVWMDEYIEHFLKQRPE 386
IWMCGG L +IPCSR+GH+FR RRPY + +D +T NSLR+AHVW+DEY E + RP+
Sbjct: 359 IWMCGGKLFIIPCSRVGHIFRKRRPYGSPEGQDTMTHNSLRLAHVWLDEYKEQYFSLRPD 418
Query: 387 ARNIDYGDVTDRKQLRARLGCKSFKWYLDNVYPEM 421
R +YG++++R +LR +L CKSFKWYLDN+YPEM
Sbjct: 419 LRTRNYGNISERVELRKKLDCKSFKWYLDNIYPEM 453
|
|
| UNIPROTKB|E1BYU3 GALNT11 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 935 (334.2 bits), Expect = 2.9e-116, Sum P(2) = 2.9e-116
Identities = 173/275 (62%), Positives = 206/275 (74%)
Query: 147 LLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKV 206
LLHEIILV+D SE +L ++ +VK L R KREGLIR RM GA +ATGKV
Sbjct: 182 LLHEIILVDDNSEL-DDLKKDLVEYVKTRLPKTTKLVRNEKREGLIRGRMIGASHATGKV 240
Query: 207 LVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLHF 266
LVFLDSH EVN WL+PLL PI E TV P+IDII+ADT Y+SS +VRGGFNWGLHF
Sbjct: 241 LVFLDSHCEVNEMWLQPLLTPIKEDRRTVVCPVIDIISADTLTYSSSPVVRGGFNWGLHF 300
Query: 267 KWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFR 326
KW+ +P L E PI SPTMAGGLFA+DR+YF+ LGQYD+G++IWGGENLE+SFR
Sbjct: 301 KWDLVPLSELEGPEGATAPIKSPTMAGGLFAMDREYFNELGQYDSGMDIWGGENLEISFR 360
Query: 327 IWMCGGSLAMIPCSRIGHVFRSRRPYNNGHNEDPLTRNSLRVAHVWMDEYIEHFLKQRPE 386
IWMCGG L +IPCSR+GH+FR RRPY + +D + NSLR+AHVWMDEY E + RPE
Sbjct: 361 IWMCGGRLLIIPCSRVGHIFRKRRPYGSPGGQDTMAHNSLRLAHVWMDEYKEQYFALRPE 420
Query: 387 ARNIDYGDVTDRKQLRARLGCKSFKWYLDNVYPEM 421
R +YG++TDR +LR RL CKSFKWYLDN+YPEM
Sbjct: 421 LRTRNYGNITDRVELRKRLNCKSFKWYLDNIYPEM 455
|
|
| UNIPROTKB|F1SSN4 GALNT11 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 925 (330.7 bits), Expect = 7.7e-116, Sum P(2) = 7.7e-116
Identities = 163/275 (59%), Positives = 212/275 (77%)
Query: 147 LLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKV 206
LLHEIILV+D S++ +L GE++ +++ G++ + R +KREGLIR RM GA +ATG+V
Sbjct: 182 LLHEIILVDDDSDF-DDLKGELDEYIQKYLTGKIKVIRNTKREGLIRGRMIGAAHATGEV 240
Query: 207 LVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLHF 266
LVFLDSH EVN WL+PLL I E +TV P+IDII+ADT Y++S +VRGGFNWGLHF
Sbjct: 241 LVFLDSHCEVNVLWLQPLLAAIREDRHTVVCPVIDIISADTLAYSASPVVRGGFNWGLHF 300
Query: 267 KWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFR 326
+W+ +P L E PI SPTMAGGLFA++R YF+ LGQYD+G++IWGGENLE+SFR
Sbjct: 301 RWDLVPLSELEGPEGATAPIKSPTMAGGLFAMNRNYFNELGQYDSGMDIWGGENLEISFR 360
Query: 327 IWMCGGSLAMIPCSRIGHVFRSRRPYNNGHNEDPLTRNSLRVAHVWMDEYIEHFLKQRPE 386
IWMCGG L +IPCSR+GH+FR RRPY + +D +T NSLR+AHVW+DEY E + RP+
Sbjct: 361 IWMCGGKLFIIPCSRVGHIFRKRRPYGSPEGQDTMTHNSLRLAHVWLDEYKEQYFSLRPD 420
Query: 387 ARNIDYGDVTDRKQLRARLGCKSFKWYLDNVYPEM 421
R YG++++R +LR +L CKSFKWYLDN+YPEM
Sbjct: 421 LRTRSYGNISERVELRKKLDCKSFKWYLDNIYPEM 455
|
|
| ZFIN|ZDB-GENE-060929-998 galnt11 "UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11)" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 924 (330.3 bits), Expect = 7.7e-116, Sum P(2) = 7.7e-116
Identities = 170/279 (60%), Positives = 209/279 (74%)
Query: 147 LLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKV 206
LLHEIILV+D SE +L +++S+V+ +V + R KREGLIR RM GA +ATG+V
Sbjct: 168 LLHEIILVDDHSEL-DDLKEDLDSYVQQHLQKKVKVVRNEKREGLIRGRMIGASHATGEV 226
Query: 207 LVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLHF 266
LVFLDSH EVN WL+PLL PI E TV P+IDII+ADT YT S +VRGGFNWGLHF
Sbjct: 227 LVFLDSHCEVNEAWLQPLLTPIKENRKTVVCPVIDIISADTLVYTPSPIVRGGFNWGLHF 286
Query: 267 KWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFR 326
KW+ +P LNS + I+ SPTMAGGLFA+DR YF LGQYD G++IWGGENLE+SFR
Sbjct: 287 KWDPVPMSELNSPDGAIR---SPTMAGGLFAMDRNYFYELGQYDRGMDIWGGENLEISFR 343
Query: 327 IWMCGGSLAMIPCSRIGHVFRSRRPYNNGHNEDPLTRNSLRVAHVWMDEYIEHFLKQRPE 386
IWMCGG L ++PCSR+GH+FR RRPY + +D + NSLR+AHVWMD+Y E + RPE
Sbjct: 344 IWMCGGQLLIVPCSRVGHIFRKRRPYGSPGGQDTMAHNSLRLAHVWMDDYKEQYFALRPE 403
Query: 387 ARNIDYGDVTDRKQLRARLGCKSFKWYLDNVYPEMILPS 425
RN DYGD+++R +R RL C SFKWYLDN+YPEM + S
Sbjct: 404 LRNRDYGDISERVSIRKRLQCHSFKWYLDNIYPEMQVSS 442
|
|
| FB|FBgn0001970 Pgant35A "Polypeptide N-acetylgalactosaminyltransferase 35A" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 944 (337.4 bits), Expect = 8.7e-98, Sum P(2) = 8.7e-98
Identities = 173/316 (54%), Positives = 229/316 (72%)
Query: 147 LLHEIILVNDFSEYPS---NLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYAT 203
LL EIILV+D S+ P +LHG++ + +K N + + +REGLIR+R+ GA+ A
Sbjct: 179 LLREIILVDDHSDLPELEFHLHGDLRARLKYDN---LRYIKNEQREGLIRSRVIGAREAV 235
Query: 204 GKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWG 263
G VLVFLDSHIEVN WLEPLL I T+ VP+ID+INADTF+YT S LVRGGFNWG
Sbjct: 236 GDVLVFLDSHIEVNQQWLEPLLRLIKSENATLAVPVIDLINADTFEYTPSPLVRGGFNWG 295
Query: 264 LHFKWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLEL 323
LHF+WENLP+GTL EDF P SPTMAGGLFA++R+YF LG+YD ++IWGGEN+E+
Sbjct: 296 LHFRWENLPEGTLKVPEDFRGPFRSPTMAGGLFAVNRKYFQHLGEYDMAMDIWGGENIEI 355
Query: 324 SFRIWMCGGSLAMIPCSRIGHVFRSRRPYNNGHNEDPLTRNSLRVAHVWMDEYIEHFLKQ 383
SFR W CGG++ ++PCSR+GH+FR RRPY + + + +NSLR+AHVWMD+Y +++LK
Sbjct: 356 SFRAWQCGGAIKIVPCSRVGHIFRKRRPYTSPDGANTMLKNSLRLAHVWMDQYKDYYLKH 415
Query: 384 RPEARNIDYGDVTDRKQLRARLGCKSFKWYLDNVYPEMILPSDDEERLKKKWAQVEQPKF 443
+ DYGD++DR +LR RL C+ F WYL NVYPE+ +P ++ KK A P F
Sbjct: 416 EKVPKTYDYGDISDRLKLRERLQCRDFAWYLKNVYPELHVPGEES----KKSAAA--PIF 469
Query: 444 QPWYSRARNYTNSLRV 459
QPW+SR RNY ++ ++
Sbjct: 470 QPWHSRKRNYVDTFQL 485
|
|
| RGD|735097 Galnt11 "UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11)" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 929 (332.1 bits), Expect = 2.7e-93, P = 2.7e-93
Identities = 176/317 (55%), Positives = 229/317 (72%)
Query: 147 LLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKV 206
LLHEIILV+D S++ +L GE++ +++ +V + R KREGLIR RM GA +ATG+V
Sbjct: 182 LLHEIILVDDSSDF-DDLKGELDEYIQRYLPAKVKVIRNMKREGLIRGRMIGAAHATGEV 240
Query: 207 LVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLHF 266
LVFLDSH EVN WL+PLL I E +TV P+IDII+ADT Y+SS +VRGGFNWGLHF
Sbjct: 241 LVFLDSHCEVNVMWLQPLLAIILEDPHTVVCPVIDIISADTLAYSSSPVVRGGFNWGLHF 300
Query: 267 KWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFR 326
KW+ +P L ++ PI SPTMAGGLFA++RQYF+ LGQYD+G++IWGGENLE+SFR
Sbjct: 301 KWDLVPVSDLGGADSATAPIRSPTMAGGLFAMNRQYFNDLGQYDSGMDIWGGENLEISFR 360
Query: 327 IWMCGGSLAMIPCSRIGHVFRSRRPYNNGHNEDPLTRNSLRVAHVWMDEYIEHFLKQRPE 386
IWMCGG L +IPCSR+GH+FR RRPY + +D +T NSLR+AHVW+DEY E + RP+
Sbjct: 361 IWMCGGKLFIIPCSRVGHIFRKRRPYGSPEGQDTMTHNSLRLAHVWLDEYKEQYFSLRPD 420
Query: 387 ARNIDYGDVTDRKQLRARLGCKSFKWYLDNVYPEMILPSDDEERLKKKWAQVEQPKFQPW 446
+ +G++++R +LR +LGC+SFKWYLDNVYPEM + S + RL++ PK
Sbjct: 421 LKTKSFGNISERVELRKKLGCQSFKWYLDNVYPEMQV-SGPKARLQQPVFINRGPKRPRV 479
Query: 447 YSRARNY---TNSLRVA 460
R R Y TN VA
Sbjct: 480 LLRGRLYHLQTNKCLVA 496
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q8NCW6 | GLT11_HUMAN | 2, ., 4, ., 1, ., 4, 1 | 0.5791 | 0.3321 | 0.4736 | yes | N/A |
| Q6P6V1 | GLT11_RAT | 2, ., 4, ., 1, ., 4, 1 | 0.5534 | 0.3610 | 0.5148 | yes | N/A |
| Q921L8 | GLT11_MOUSE | 2, ., 4, ., 1, ., 4, 1 | 0.5795 | 0.3252 | 0.4638 | yes | N/A |
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.4.1 | LOW CONFIDENCE prediction! |
| 4th Layer | 2.4.1.80 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 867 | |||
| cd02510 | 299 | cd02510, pp-GalNAc-T, pp-GalNAc-T initiates the fo | 1e-140 | |
| cd02510 | 299 | cd02510, pp-GalNAc-T, pp-GalNAc-T initiates the fo | 6e-25 | |
| cd02510 | 299 | cd02510, pp-GalNAc-T, pp-GalNAc-T initiates the fo | 1e-24 | |
| pfam00535 | 168 | pfam00535, Glycos_transf_2, Glycosyl transferase f | 3e-19 | |
| pfam00535 | 168 | pfam00535, Glycos_transf_2, Glycosyl transferase f | 3e-13 | |
| pfam00652 | 124 | pfam00652, Ricin_B_lectin, Ricin-type beta-trefoil | 9e-12 | |
| cd00161 | 124 | cd00161, RICIN, Ricin-type beta-trefoil; Carbohydr | 6e-11 | |
| smart00458 | 118 | smart00458, RICIN, Ricin-type beta-trefoil | 6e-11 | |
| cd00161 | 124 | cd00161, RICIN, Ricin-type beta-trefoil; Carbohydr | 1e-08 | |
| TIGR03965 | 467 | TIGR03965, mycofact_glyco, mycofactocin system gly | 1e-08 | |
| cd00761 | 156 | cd00761, Glyco_tranf_GTA_type, Glycosyltransferase | 2e-08 | |
| smart00443 | 47 | smart00443, G_patch, glycine rich nucleic binding | 5e-08 | |
| pfam01585 | 45 | pfam01585, G-patch, G-patch domain | 1e-07 | |
| pfam00652 | 124 | pfam00652, Ricin_B_lectin, Ricin-type beta-trefoil | 2e-07 | |
| COG1216 | 305 | COG1216, COG1216, Predicted glycosyltransferases [ | 2e-06 | |
| COG0463 | 291 | COG0463, WcaA, Glycosyltransferases involved in ce | 6e-06 | |
| cd00161 | 124 | cd00161, RICIN, Ricin-type beta-trefoil; Carbohydr | 4e-05 | |
| smart00458 | 118 | smart00458, RICIN, Ricin-type beta-trefoil | 5e-05 | |
| COG1215 | 439 | COG1215, COG1215, Glycosyltransferases, probably i | 7e-05 | |
| smart00458 | 118 | smart00458, RICIN, Ricin-type beta-trefoil | 9e-05 | |
| COG1215 | 439 | COG1215, COG1215, Glycosyltransferases, probably i | 2e-04 | |
| cd00761 | 156 | cd00761, Glyco_tranf_GTA_type, Glycosyltransferase | 3e-04 | |
| COG0463 | 291 | COG0463, WcaA, Glycosyltransferases involved in ce | 3e-04 | |
| pfam12656 | 79 | pfam12656, G-patch_2, DExH-box splicing factor bin | 4e-04 |
| >gnl|CDD|133004 cd02510, pp-GalNAc-T, pp-GalNAc-T initiates the formation of mucin-type O-linked glycans | Back alignment and domain information |
|---|
Score = 418 bits (1077), Expect = e-140
Identities = 166/274 (60%), Positives = 197/274 (71%), Gaps = 5/274 (1%)
Query: 147 LLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKV 206
LL EIILV+DFS+ P L +E + K +V + R KREGLIRAR+ GA+ ATG V
Sbjct: 29 LLKEIILVDDFSDKP-ELKLLLEEYYKKYL-PKVKVLRLKKREGLIRARIAGARAATGDV 86
Query: 207 LVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQY-TSSALVRGGFNWGLH 265
LVFLDSH EVN WLEPLL IAE TV PIID+I+ADTF+Y SS RGGF+W LH
Sbjct: 87 LVFLDSHCEVNVGWLEPLLARIAENRKTVVCPIIDVIDADTFEYRGSSGDARGGFDWSLH 146
Query: 266 FKWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSF 325
FKW LP+ E PI SPTMAGGLFAIDR++F LG YD G++IWGGENLELSF
Sbjct: 147 FKWLPLPEEERRR-ESPTAPIRSPTMAGGLFAIDREWFLELGGYDEGMDIWGGENLELSF 205
Query: 326 RIWMCGGSLAMIPCSRIGHVFRS-RRPYNNGHNEDPLTRNSLRVAHVWMDEYIEHFLKQR 384
++W CGGS+ ++PCSR+GH+FR R+PY + RN RVA VWMDEY E+F K R
Sbjct: 206 KVWQCGGSIEIVPCSRVGHIFRRKRKPYTFPGGSGTVLRNYKRVAEVWMDEYKEYFYKAR 265
Query: 385 PEARNIDYGDVTDRKQLRARLGCKSFKWYLDNVY 418
PE RNIDYGD+++RK LR RL CKSFKWYL+NVY
Sbjct: 266 PELRNIDYGDLSERKALRERLKCKSFKWYLENVY 299
|
UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins. Length = 299 |
| >gnl|CDD|133004 cd02510, pp-GalNAc-T, pp-GalNAc-T initiates the formation of mucin-type O-linked glycans | Back alignment and domain information |
|---|
Score = 105 bits (265), Expect = 6e-25
Identities = 40/55 (72%), Positives = 45/55 (81%)
Query: 455 NSLRVAHVWMDEYIEHFLKQRPEARNIDYGDVTDRKQLRARLGCKSFKWYLDNVY 509
N RVA VWMDEY E+F K RPE RNIDYGD+++RK LR RL CKSFKWYL+NVY
Sbjct: 245 NYKRVAEVWMDEYKEYFYKARPELRNIDYGDLSERKALRERLKCKSFKWYLENVY 299
|
UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins. Length = 299 |
| >gnl|CDD|133004 cd02510, pp-GalNAc-T, pp-GalNAc-T initiates the formation of mucin-type O-linked glycans | Back alignment and domain information |
|---|
Score = 104 bits (263), Expect = 1e-24
Identities = 43/88 (48%), Positives = 58/88 (65%), Gaps = 2/88 (2%)
Query: 55 SVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDG 114
SVII F+NE +TL R+V ++++RT LL EIILV+DFS+ P L +E + K
Sbjct: 1 SVIIIFHNEALSTLLRTVHSVINRTPPELLKEIILVDDFSDKP-ELKLLLEEYYKKYL-P 58
Query: 115 RVHLYRTSKREGLIRARMFGAKYATGKN 142
+V + R KREGLIRAR+ GA+ ATG
Sbjct: 59 KVKVLRLKKREGLIRARIAGARAATGDV 86
|
UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins. Length = 299 |
| >gnl|CDD|215980 pfam00535, Glycos_transf_2, Glycosyl transferase family 2 | Back alignment and domain information |
|---|
Score = 85.2 bits (211), Expect = 3e-19
Identities = 42/166 (25%), Positives = 64/166 (38%), Gaps = 20/166 (12%)
Query: 144 IQSLLH------EIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMF 197
++SLL+ EII+V+D S E + K N+ RV + R + G AR
Sbjct: 17 LESLLNQTYKNFEIIVVDDGS--TDGTVEIAEEYAK--NDPRVRVIRLEENLGKAAARNA 72
Query: 198 GAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVR 257
G K ATG + FLD+ EV WLE L+ + + + + +IN +T Y
Sbjct: 73 GLKLATGDYIAFLDADDEVAPDWLEKLVELLEKNGADIVIGSRVVINGETRLY------- 125
Query: 258 GGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYF 303
L F+ L S L + A + +
Sbjct: 126 ---GRALRFELLLLLGKLGARSLGLKVLFLIGSNALYRREVLEELL 168
|
Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids. Length = 168 |
| >gnl|CDD|215980 pfam00535, Glycos_transf_2, Glycosyl transferase family 2 | Back alignment and domain information |
|---|
Score = 68.3 bits (167), Expect = 3e-13
Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 55 SVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDG 114
SVII YNE L ++++LL++T ++ EII+V+D S E + K ND
Sbjct: 1 SVIIPTYNE-EKYLEETLESLLNQTYKNF--EIIVVDDGS--TDGTVEIAEEYAK--NDP 53
Query: 115 RVHLYRTSKREGLIRARMFGAKYATGK 141
RV + R + G AR G K ATG
Sbjct: 54 RVRVIRLEENLGKAAARNAGLKLATGD 80
|
Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids. Length = 168 |
| >gnl|CDD|216044 pfam00652, Ricin_B_lectin, Ricin-type beta-trefoil lectin domain | Back alignment and domain information |
|---|
Score = 62.6 bits (152), Expect = 9e-12
Identities = 26/111 (23%), Positives = 41/111 (36%), Gaps = 9/111 (8%)
Query: 683 SGTDLCLTSKVDKTKGSPLVLKKCDELSKTQRWSKTDKSEL--VLAELLCLDAG----AT 736
+ + CL G P+ L C Q W+ T + LCLD +
Sbjct: 9 NRSGKCLDVPGGSADGGPVGLYPCHG-GGNQLWTLTGDGTIRSNGNSNLCLDVSGGGNGS 67
Query: 737 KPKLTKCHEMGGSQEWNFVLRDKTPIYSPATGTCLGSKNRLENTVIVMEMC 787
K L C+ G+Q W++ I + +G CL K T +++ C
Sbjct: 68 KVVLWPCNGGSGNQRWDY--DGDGTIRNRKSGKCLDVKGASNGTKVILWTC 116
|
Length = 124 |
| >gnl|CDD|238092 cd00161, RICIN, Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication | Back alignment and domain information |
|---|
Score = 60.2 bits (146), Expect = 6e-11
Identities = 31/114 (27%), Positives = 46/114 (40%), Gaps = 10/114 (8%)
Query: 678 FHIRLSG-TDLCLTSKVDKTKGSPLVLKKCDELSKTQRWSKTDKSELVL-AELLCLDAGA 735
IR T LCL + G P+ L C Q+W+ T + + + LCLD G
Sbjct: 1 GTIRNVNNTGLCLDVN-GGSDGGPVQLYPCHGNGNNQKWTLTSDGTIRIKSSNLCLDVGG 59
Query: 736 ----TKPKLTKCHEMGGSQEWNFVLRDKTPIYSPATGTCLGSKNRLEN-TVIVM 784
+K +L C +Q W F I + +G CL K N T +++
Sbjct: 60 DAPGSKVRLYTCSGGSDNQRWTF--NKDGTIRNLKSGKCLDVKGGNTNGTNLIL 111
|
The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture. Length = 124 |
| >gnl|CDD|214672 smart00458, RICIN, Ricin-type beta-trefoil | Back alignment and domain information |
|---|
Score = 60.2 bits (146), Expect = 6e-11
Identities = 30/123 (24%), Positives = 45/123 (36%), Gaps = 9/123 (7%)
Query: 680 IRLSGTDLCLTSKVDKTKGSPLVLKKCDELSKTQRWSKTDKSEL-VLAELLCLDAGATKP 738
I T CL +K P+ L C Q W T + + LCL A
Sbjct: 1 IISGNTGKCLDVNGNKN---PVGLFDCHGTGGNQLWKLTSDGAIRIKDTDLCLTANGNTG 57
Query: 739 ---KLTKCHEMGGSQEWNFVLRDKTPIYSPATGTCLGSKNRLENTVIVMEMCAQHKDTSW 795
L C +Q W +D T I +P +G CL K+ T +++ C+ + + W
Sbjct: 58 STVTLYSCDGTNDNQYWEV-NKDGT-IRNPDSGKCLDVKDGNTGTKVILWTCSGNPNQKW 115
Query: 796 DLV 798
Sbjct: 116 IFE 118
|
Carbohydrate-binding domain formed from presumed gene triplication. Length = 118 |
| >gnl|CDD|238092 cd00161, RICIN, Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication | Back alignment and domain information |
|---|
Score = 53.7 bits (129), Expect = 1e-08
Identities = 34/169 (20%), Positives = 52/169 (30%), Gaps = 57/169 (33%)
Query: 552 LSSTDLCLTSKVDKTKGSPLVLKKCDELSKTQHWSKTDKSELVL-AELLCLDAGA----T 606
+++T LCL + G P+ L C Q W+ T + + + LCLD G +
Sbjct: 6 VNNTGLCLDVN-GGSDGGPVQLYPCHGNGNNQKWTLTSDGTIRIKSSNLCLDVGGDAPGS 64
Query: 607 KPKLTKCHEMGGSQEYWCWLRCKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQP 666
K +L C +Q +W +
Sbjct: 65 KVRLYTCSGGSDNQ-----------RWTFNKDG--------------------------- 86
Query: 667 WYSRARNYTSHFHIRLSGTDLCLTSKVDKTKGSPLVLKKCDELSKTQRW 715
IR + CL K T G+ L+L CD Q+W
Sbjct: 87 ------------TIRNLKSGKCLDVKGGNTNGTNLILWTCDG-GPNQKW 122
|
The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture. Length = 124 |
| >gnl|CDD|234419 TIGR03965, mycofact_glyco, mycofactocin system glycosyltransferase | Back alignment and domain information |
|---|
Score = 57.8 bits (140), Expect = 1e-08
Identities = 56/239 (23%), Positives = 93/239 (38%), Gaps = 44/239 (18%)
Query: 149 HEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLV 208
E+I+V+D SE P V + V + R +R+G AR GA+ A + +
Sbjct: 106 LEVIVVDDGSEDP------VPTRAARGARLPVRVIRHPRRQGPAAARNAGARAARTEFVA 159
Query: 209 FLDSHIEVNTHWLEPLLVPIAE-RTNTVTVPIIDIINADT----FQYTSSALVRGGFNWG 263
F DS + WL LL + V ++ + DT ++ S+L
Sbjct: 160 FTDSDVVPRPGWLRALLAHFDDPGVALVAPRVVALPAEDTRLARYEAVRSSL-------- 211
Query: 264 LHFKWENLPKGTLNSSEDFIKPILSPT--MAGGLFAIDRQYFDSLGQYDAGLEIWGGENL 321
L E ++P P + + R+ +G +D LE+ GE++
Sbjct: 212 -----------DLGPEEAVVRP-RGPVSYVPSAALLVRRRALLEVGGFDERLEV--GEDV 257
Query: 322 ELSFRIWMCGGSLAMIPCSRIGHVFRSR------RPYNNGHNEDPLTR---NSLRVAHV 371
+L +R+ GG + P + + H R+R R G + PL R S+R V
Sbjct: 258 DLCWRLCEAGGRVRYEPAAVVAHDHRTRLWPWLARRAFYGTSAAPLARRHPGSVRPMVV 316
|
Members of this protein family are putative glycosyltransferases, members of pfam00535 (glycosyl transferase family 2). Members appear mostly in the Actinobacteria, where they appear to be part of a system for converting a precursor peptide (TIGR03969) into a novel redox carrier designated mycofactocin. A radical SAM enzyme, TIGR03962, is a proposed to be a key maturase for mycofactocin. Length = 467 |
| >gnl|CDD|132997 cd00761, Glyco_tranf_GTA_type, Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold | Back alignment and domain information |
|---|
Score = 53.7 bits (129), Expect = 2e-08
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 10/96 (10%)
Query: 144 IQSLL------HEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMF 197
++SLL E+I+V+D S + +E + K + RV + +GL AR
Sbjct: 16 LESLLAQTYPNFEVIVVDDGSTDGTLE--ILEEYAK--KDPRVIRVINEENQGLAAARNA 71
Query: 198 GAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAERTN 233
G K A G+ ++FLD+ + WLE L+ +
Sbjct: 72 GLKAARGEYILFLDADDLLLPDWLERLVAELLADPE 107
|
Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities. Length = 156 |
| >gnl|CDD|197727 smart00443, G_patch, glycine rich nucleic binding domain | Back alignment and domain information |
|---|
Score = 49.5 bits (119), Expect = 5e-08
Identities = 15/26 (57%), Positives = 18/26 (69%)
Query: 818 IPNENKGFRMLSKMGWKAGQTLGKDE 843
I N G ++L KMGWK GQ LGK+E
Sbjct: 1 ISTSNIGAKLLRKMGWKEGQGLGKNE 26
|
A predicted glycine rich nucleic binding domain found in the splicing factor 45, SON DNA binding protein and D-type Retrovirus- polyproteins. Length = 47 |
| >gnl|CDD|144978 pfam01585, G-patch, G-patch domain | Back alignment and domain information |
|---|
Score = 48.3 bits (116), Expect = 1e-07
Identities = 15/23 (65%), Positives = 18/23 (78%)
Query: 821 ENKGFRMLSKMGWKAGQTLGKDE 843
N GF++L KMGWK GQ LGK+E
Sbjct: 2 SNIGFKLLQKMGWKPGQGLGKNE 24
|
This domain is found in a number of RNA binding proteins, and is also found in proteins that contain RNA binding domains. This suggests that this domain may have an RNA binding function. This domain has seven highly conserved glycines. Length = 45 |
| >gnl|CDD|216044 pfam00652, Ricin_B_lectin, Ricin-type beta-trefoil lectin domain | Back alignment and domain information |
|---|
Score = 50.2 bits (120), Expect = 2e-07
Identities = 31/169 (18%), Positives = 47/169 (27%), Gaps = 59/169 (34%)
Query: 553 SSTDLCLTSKVDKTKGSPLVLKKCDELSKTQHWSKTDKSEL--VLAELLCLDAG----AT 606
+ + CL G P+ L C Q W+ T + LCLD +
Sbjct: 9 NRSGKCLDVPGGSADGGPVGLYPCHG-GGNQLWTLTGDGTIRSNGNSNLCLDVSGGGNGS 67
Query: 607 KPKLTKCHEMGGSQEYWCWLRCKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQP 666
K L C+ G+Q +W
Sbjct: 68 KVVLWPCNGGSGNQ-----------RWD-------------------------------- 84
Query: 667 WYSRARNYTSHFHIRLSGTDLCLTSKVDKTKGSPLVLKKCDELSKTQRW 715
Y IR + CL K + G+ ++L CD + Q+W
Sbjct: 85 -------YDGDGTIRNRKSGKCLDVKGA-SNGTKVILWTCDG-NPNQQW 124
|
Length = 124 |
| >gnl|CDD|224137 COG1216, COG1216, Predicted glycosyltransferases [General function prediction only] | Back alignment and domain information |
|---|
Score = 50.2 bits (120), Expect = 2e-06
Identities = 50/224 (22%), Positives = 79/224 (35%), Gaps = 32/224 (14%)
Query: 137 YATGKNRIQSL---------LHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSK 187
Y G++ ++ L I++V++ S +K V L +
Sbjct: 12 YNRGEDLVECLASLAAQTYPDDVIVVVDNGS------TDGSLEALKARFFPNVRLIENGE 65
Query: 188 REGLIRARMFGAKYATGKV---LVFLDSHIEVNTHWLEPLLVPIAE-RTNTVTVPIIDII 243
G G KYA K ++ L+ V LE LL E V P+I
Sbjct: 66 NLGFAGGFNRGIKYALAKGDDYVLLLNPDTVVEPDLLEELLKAAEEDPAAGVVGPLIRN- 124
Query: 244 NADTFQYTSSALVRGGFNWGLHFKWENLPKGT---LNSSEDFIKPILSPTMAGGLFAIDR 300
+ + RGG + GL W P SS + LS G I R
Sbjct: 125 ----YDESLYIDRRGGESDGLTGGWRASPLLEIAPDLSSYLEVVASLS----GACLLIRR 176
Query: 301 QYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGH 344
+ F+ +G +D I+ E+++L R G + +P + I H
Sbjct: 177 EAFEKVGGFDERFFIY-YEDVDLCLRARKAGYKIYYVPDAIIYH 219
|
Length = 305 |
| >gnl|CDD|223539 COG0463, WcaA, Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 48.5 bits (114), Expect = 6e-06
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 55 SVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDG 114
SV+I YNE L ++++LL++T + EII+V+D S + + G D
Sbjct: 6 SVVIPTYNE-EEYLPEALESLLNQTYKDF--EIIVVDDGSTDGTTE--IAIEY--GAKDV 58
Query: 115 RVHLYRTSKREGLIRARMFGAKYATGK 141
RV + GL AR G +YA G
Sbjct: 59 RVIRLINERNGGLGAARNAGLEYARGD 85
|
Length = 291 |
| >gnl|CDD|238092 cd00161, RICIN, Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 4e-05
Identities = 23/95 (24%), Positives = 31/95 (32%), Gaps = 12/95 (12%)
Query: 526 WAQVEQPKFQPWYSRARNYTSHFHIRLSSTDLCLTSKVDKTKGSPLVLKKCDELSKTQHW 585
+ Q W TS IR+ S++LCL GS + L C S Q W
Sbjct: 27 YPCHGNGNNQKWT-----LTSDGTIRIKSSNLCLDV-GGDAPGSKVRLYTCSGGSDNQRW 80
Query: 586 SKTDKSELVLAEL-LCLDA-----GATKPKLTKCH 614
+ + + CLD T L C
Sbjct: 81 TFNKDGTIRNLKSGKCLDVKGGNTNGTNLILWTCD 115
|
The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture. Length = 124 |
| >gnl|CDD|214672 smart00458, RICIN, Ricin-type beta-trefoil | Back alignment and domain information |
|---|
Score = 43.3 bits (102), Expect = 5e-05
Identities = 31/170 (18%), Positives = 46/170 (27%), Gaps = 59/170 (34%)
Query: 550 IRLSSTDLCLTSKVDKTKGSPLVLKKCDELSKTQHWSKTDKSEL-VLAELLCLDAGATKP 608
I +T CL +K P+ L C Q W T + + LCL A
Sbjct: 1 IISGNTGKCLDVNGNKN---PVGLFDCHGTGGNQLWKLTSDGAIRIKDTDLCLTANGNTG 57
Query: 609 ---KLTKCHEMGGSQEYWCWLRCKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQ 665
L C +Q W ++
Sbjct: 58 STVTLYSCDGTNDNQ-----------YWEVNK---------------------------- 78
Query: 666 PWYSRARNYTSHFHIRLSGTDLCLTSKVDKTKGSPLVLKKCDELSKTQRW 715
+ T IR + CL K D G+ ++L C + Q+W
Sbjct: 79 -------DGT----IRNPDSGKCLDVK-DGNTGTKVILWTCSG-NPNQKW 115
|
Carbohydrate-binding domain formed from presumed gene triplication. Length = 118 |
| >gnl|CDD|224136 COG1215, COG1215, Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 7e-05
Identities = 36/183 (19%), Positives = 62/183 (33%), Gaps = 16/183 (8%)
Query: 149 HEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLV 208
+E+I+V+D S + +E +Y K G A G K A G V+V
Sbjct: 85 YEVIVVDDGST--DETYEILEELGAEYGPNFRVIYPEKKNGGKAGALNNGLKRAKGDVVV 142
Query: 209 FLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKW 268
LD+ L L+ P + V I N + + +F+
Sbjct: 143 ILDADTVPEPDALRELVSPFEDPPVGAVVGTPRIRNRPDPSNLLGRIQAIEYLSAFYFRL 202
Query: 269 ENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIW 328
+S+ + LS G A R + +G + E+ +L+ R+
Sbjct: 203 -------RAASKGGLISFLS----GSSSAFRRSALEEVGGWLED---TITEDADLTLRLH 248
Query: 329 MCG 331
+ G
Sbjct: 249 LRG 251
|
Length = 439 |
| >gnl|CDD|214672 smart00458, RICIN, Ricin-type beta-trefoil | Back alignment and domain information |
|---|
Score = 42.5 bits (100), Expect = 9e-05
Identities = 30/96 (31%), Positives = 37/96 (38%), Gaps = 13/96 (13%)
Query: 665 QPWYSRARNYTSHFHIRLSGTDLCLTSKVDKTKGSPLVLKKCDELSKTQRWS-KTDKSEL 723
Q W TS IR+ TDLCLT + GS + L CD + Q W D +
Sbjct: 31 QLWK-----LTSDGAIRIKDTDLCLT--ANGNTGSTVTLYSCDGTNDNQYWEVNKDGTIR 83
Query: 724 VLAELLCLDA----GATKPKLTKCHEMGGSQEWNFV 755
CLD TK L C +Q+W F
Sbjct: 84 NPDSGKCLDVKDGNTGTKVILWTCSG-NPNQKWIFE 118
|
Carbohydrate-binding domain formed from presumed gene triplication. Length = 118 |
| >gnl|CDD|224136 COG1215, COG1215, Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 44.5 bits (105), Expect = 2e-04
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 4/91 (4%)
Query: 51 LPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKG 110
LP SVII YNE P L ++++LLS+ +E+I+V+D S + +E
Sbjct: 53 LPKVSVIIPAYNEEPEVLEETLESLLSQDYPR--YEVIVVDDGST--DETYEILEELGAE 108
Query: 111 LNDGRVHLYRTSKREGLIRARMFGAKYATGK 141
+Y K G A G K A G
Sbjct: 109 YGPNFRVIYPEKKNGGKAGALNNGLKRAKGD 139
|
Length = 439 |
| >gnl|CDD|132997 cd00761, Glyco_tranf_GTA_type, Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 3e-04
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 16/101 (15%)
Query: 56 VIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGR 115
VII YNE L R +++LL++T + E+I+V+D S + +E + K D R
Sbjct: 1 VIIPAYNE-EPYLERCLESLLAQTYPNF--EVIVVDDGSTDGTLE--ILEEYAK--KDPR 53
Query: 116 VHLYRTSKREGLIRARMFGAKYATGKNRIQSLLHEIILVND 156
V + +GL AR G K A G E IL D
Sbjct: 54 VIRVINEENQGLAAARNAGLKAARG---------EYILFLD 85
|
Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities. Length = 156 |
| >gnl|CDD|223539 COG0463, WcaA, Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 43.1 bits (100), Expect = 3e-04
Identities = 28/111 (25%), Positives = 43/111 (38%), Gaps = 15/111 (13%)
Query: 144 IQSLLH------EIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMF 197
++SLL+ EII+V+D S + + G + RV + GL AR
Sbjct: 22 LESLLNQTYKDFEIIVVDDGSTDGTTE--IAIEY--GAKDVRVIRLINERNGGLGAARNA 77
Query: 198 GAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTF 248
G +YA G +VFLD+ P L+P+ D +
Sbjct: 78 GLEYARGDYIVFLDADD-----QHPPELIPLVAAGGDGDYIARLDDRDDIW 123
|
Length = 291 |
| >gnl|CDD|221692 pfam12656, G-patch_2, DExH-box splicing factor binding site | Back alignment and domain information |
|---|
Score = 39.3 bits (92), Expect = 4e-04
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 816 ESIPNENKGFRMLSKMGWKAGQTLGKDEANSAALIEPE-----LGL 856
E++P E G +L MGWK GQ +GK+ EP+ LGL
Sbjct: 26 EAVPVEEFGAALLRGMGWKEGQGIGKNNKGDVKPKEPKRRPGGLGL 71
|
Yeast Spp2, a G-patch protein and spliceosome component, interacts with the ATP-dependent DExH-box splicing factor Prp2. As this interaction involves the G-patch sequence in Spp2 and is required for the recruitment of Prp2 to the spliceosome before the first catalytic step of splicing, it is proposed that Spp2 might be an accessory factor that confers spliceosome specificity on Prp2. Length = 79 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 867 | |||
| KOG3736|consensus | 578 | 100.0 | ||
| KOG3738|consensus | 559 | 100.0 | ||
| KOG3737|consensus | 603 | 100.0 | ||
| cd02510 | 299 | pp-GalNAc-T pp-GalNAc-T initiates the formation of | 100.0 | |
| cd02520 | 196 | Glucosylceramide_synthase Glucosylceramide synthas | 99.95 | |
| COG1216 | 305 | Predicted glycosyltransferases [General function p | 99.94 | |
| cd04184 | 202 | GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot | 99.94 | |
| cd06437 | 232 | CESA_CaSu_A2 Cellulose synthase catalytic subunit | 99.94 | |
| KOG3736|consensus | 578 | 99.94 | ||
| cd06435 | 236 | CESA_NdvC_like NdvC_like proteins in this family a | 99.93 | |
| cd06420 | 182 | GT2_Chondriotin_Pol_N N-terminal domain of Chondro | 99.93 | |
| cd04195 | 201 | GT2_AmsE_like GT2_AmsE_like is involved in exopoly | 99.93 | |
| cd06421 | 234 | CESA_CelA_like CESA_CelA_like are involved in the | 99.93 | |
| PRK11204 | 420 | N-glycosyltransferase; Provisional | 99.93 | |
| TIGR03469 | 384 | HonB hopene-associated glycosyltransferase HpnB. T | 99.93 | |
| cd06427 | 241 | CESA_like_2 CESA_like_2 is a member of the cellulo | 99.93 | |
| PF13641 | 228 | Glyco_tranf_2_3: Glycosyltransferase like family 2 | 99.93 | |
| PRK14583 | 444 | hmsR N-glycosyltransferase; Provisional | 99.93 | |
| cd06913 | 219 | beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran | 99.92 | |
| TIGR01556 | 281 | rhamnosyltran L-rhamnosyltransferase. Rhamnolipids | 99.92 | |
| TIGR03111 | 439 | glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0 | 99.92 | |
| cd04185 | 202 | GT_2_like_b Subfamily of Glycosyltransferase Famil | 99.92 | |
| cd02526 | 237 | GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr | 99.92 | |
| cd02525 | 249 | Succinoglycan_BP_ExoA ExoA is involved in the bios | 99.92 | |
| PRK10018 | 279 | putative glycosyl transferase; Provisional | 99.91 | |
| KOG3738|consensus | 559 | 99.91 | ||
| cd04192 | 229 | GT_2_like_e Subfamily of Glycosyltransferase Famil | 99.91 | |
| TIGR03472 | 373 | HpnI hopanoid biosynthesis associated glycosyl tra | 99.91 | |
| PF10111 | 281 | Glyco_tranf_2_2: Glycosyltransferase like family 2 | 99.91 | |
| cd06433 | 202 | GT_2_WfgS_like WfgS and WfeV are involved in O-ant | 99.9 | |
| cd04186 | 166 | GT_2_like_c Subfamily of Glycosyltransferase Famil | 99.9 | |
| cd06442 | 224 | DPM1_like DPM1_like represents putative enzymes si | 99.9 | |
| PRK10073 | 328 | putative glycosyl transferase; Provisional | 99.9 | |
| PLN02726 | 243 | dolichyl-phosphate beta-D-mannosyltransferase | 99.89 | |
| cd06439 | 251 | CESA_like_1 CESA_like_1 is a member of the cellulo | 99.89 | |
| PRK11498 | 852 | bcsA cellulose synthase catalytic subunit; Provisi | 99.89 | |
| cd02522 | 221 | GT_2_like_a GT_2_like_a represents a glycosyltrans | 99.89 | |
| cd04196 | 214 | GT_2_like_d Subfamily of Glycosyltransferase Famil | 99.88 | |
| cd06434 | 235 | GT2_HAS Hyaluronan synthases catalyze polymerizati | 99.87 | |
| PRK10063 | 248 | putative glycosyl transferase; Provisional | 99.87 | |
| TIGR03030 | 713 | CelA cellulose synthase catalytic subunit (UDP-for | 99.87 | |
| PF00535 | 169 | Glycos_transf_2: Glycosyl transferase family 2; In | 99.84 | |
| COG1215 | 439 | Glycosyltransferases, probably involved in cell wa | 99.83 | |
| cd04188 | 211 | DPG_synthase DPG_synthase is involved in protein N | 99.83 | |
| cd04179 | 185 | DPM_DPG-synthase_like DPM_DPG-synthase_like is a m | 99.82 | |
| cd04190 | 244 | Chitin_synth_C C-terminal domain of Chitin Synthas | 99.82 | |
| cd06423 | 180 | CESA_like CESA_like is the cellulose synthase supe | 99.81 | |
| cd04187 | 181 | DPM1_like_bac Bacterial DPM1_like enzymes are rela | 99.79 | |
| cd06438 | 183 | EpsO_like EpsO protein participates in the methano | 99.76 | |
| cd04191 | 254 | Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon | 99.76 | |
| KOG3737|consensus | 603 | 99.75 | ||
| PTZ00260 | 333 | dolichyl-phosphate beta-glucosyltransferase; Provi | 99.75 | |
| PRK14716 | 504 | bacteriophage N4 adsorption protein B; Provisional | 99.71 | |
| PRK13915 | 306 | putative glucosyl-3-phosphoglycerate synthase; Pro | 99.7 | |
| cd06436 | 191 | GlcNAc-1-P_transferase N-acetyl-glucosamine transf | 99.7 | |
| PRK10714 | 325 | undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi | 99.69 | |
| KOG2978|consensus | 238 | 99.64 | ||
| cd00161 | 124 | RICIN Ricin-type beta-trefoil; Carbohydrate-bindin | 99.63 | |
| PF00652 | 124 | Ricin_B_lectin: Ricin-type beta-trefoil lectin dom | 99.59 | |
| smart00458 | 117 | RICIN Ricin-type beta-trefoil. Carbohydrate-bindin | 99.58 | |
| cd00761 | 156 | Glyco_tranf_GTA_type Glycosyltransferase family A | 99.58 | |
| PRK11234 | 727 | nfrB bacteriophage N4 adsorption protein B; Provis | 99.57 | |
| COG0463 | 291 | WcaA Glycosyltransferases involved in cell wall bi | 99.55 | |
| cd02511 | 229 | Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 | 99.54 | |
| PRK05454 | 691 | glucosyltransferase MdoH; Provisional | 99.54 | |
| cd00161 | 124 | RICIN Ricin-type beta-trefoil; Carbohydrate-bindin | 99.52 | |
| PF00652 | 124 | Ricin_B_lectin: Ricin-type beta-trefoil lectin dom | 99.51 | |
| smart00458 | 117 | RICIN Ricin-type beta-trefoil. Carbohydrate-bindin | 99.44 | |
| PF13712 | 217 | Glyco_tranf_2_5: Glycosyltransferase like family; | 99.41 | |
| PRK15489 | 703 | nfrB bacteriophage N4 adsorption protein B; Provis | 99.4 | |
| cd00899 | 219 | b4GalT Beta-4-Galactosyltransferase is involved in | 99.19 | |
| PF14200 | 105 | RicinB_lectin_2: Ricin-type beta-trefoil lectin do | 99.15 | |
| PF13632 | 193 | Glyco_trans_2_3: Glycosyl transferase family group | 99.05 | |
| cd02514 | 334 | GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an es | 99.0 | |
| KOG2977|consensus | 323 | 98.97 | ||
| PF13506 | 175 | Glyco_transf_21: Glycosyl transferase family 21 | 98.94 | |
| PF01585 | 45 | G-patch: G-patch domain; InterPro: IPR000467 The D | 98.94 | |
| PF02709 | 78 | Glyco_transf_7C: N-terminal domain of galactosyltr | 98.92 | |
| COG4092 | 346 | Predicted glycosyltransferase involved in capsule | 98.92 | |
| PF14200 | 105 | RicinB_lectin_2: Ricin-type beta-trefoil lectin do | 98.87 | |
| KOG3588|consensus | 494 | 98.77 | ||
| cd02510 | 299 | pp-GalNAc-T pp-GalNAc-T initiates the formation of | 98.64 | |
| smart00443 | 47 | G_patch glycine rich nucleic binding domain. A pre | 98.64 | |
| PF05679 | 499 | CHGN: Chondroitin N-acetylgalactosaminyltransferas | 98.56 | |
| KOG0965|consensus | 988 | 98.52 | ||
| KOG3916|consensus | 372 | 98.48 | ||
| KOG2547|consensus | 431 | 98.32 | ||
| PF11397 | 343 | GlcNAc: Glycosyltransferase (GlcNAc); InterPro: IP | 97.98 | |
| KOG1994|consensus | 268 | 97.89 | ||
| PLN02893 | 734 | Cellulose synthase-like protein | 97.89 | |
| PF03142 | 527 | Chitin_synth_2: Chitin synthase; InterPro: IPR0048 | 97.88 | |
| KOG2184|consensus | 767 | 97.5 | ||
| KOG2185|consensus | 486 | 97.49 | ||
| PF03452 | 269 | Anp1: Anp1; InterPro: IPR005109 The members of thi | 97.35 | |
| KOG2809|consensus | 326 | 97.32 | ||
| KOG3673|consensus | 845 | 97.24 | ||
| KOG1996|consensus | 378 | 97.05 | ||
| KOG4368|consensus | 757 | 96.84 | ||
| PF03071 | 434 | GNT-I: GNT-I family; InterPro: IPR004139 The biosy | 96.79 | |
| PF13896 | 317 | Glyco_transf_49: Glycosyl-transferase for dystrogl | 96.74 | |
| PF12656 | 77 | G-patch_2: DExH-box splicing factor binding site | 96.56 | |
| PF13704 | 97 | Glyco_tranf_2_4: Glycosyl transferase family 2 | 96.54 | |
| PF03498 | 150 | CDtoxinA: Cytolethal distending toxin A/C family; | 96.33 | |
| KOG2384|consensus | 223 | 96.14 | ||
| COG2943 | 736 | MdoH Membrane glycosyltransferase [Cell envelope b | 95.72 | |
| PLN02195 | 977 | cellulose synthase A | 95.01 | |
| KOG0154|consensus | 573 | 94.94 | ||
| PLN02189 | 1040 | cellulose synthase | 94.85 | |
| PLN02638 | 1079 | cellulose synthase A (UDP-forming), catalytic subu | 94.01 | |
| KOG2571|consensus | 862 | 93.98 | ||
| KOG3917|consensus | 310 | 93.88 | ||
| KOG2138|consensus | 883 | 92.57 | ||
| PF09488 | 381 | Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthas | 91.68 | |
| PF11735 | 241 | CAP59_mtransfer: Cryptococcal mannosyltransferase | 91.36 | |
| PF11316 | 234 | Rhamno_transf: Putative rhamnosyl transferase ; In | 91.36 | |
| TIGR02460 | 381 | osmo_MPGsynth mannosyl-3-phosphoglycerate synthase | 91.2 | |
| PRK14503 | 393 | mannosyl-3-phosphoglycerate synthase; Provisional | 90.95 | |
| PF09258 | 247 | Glyco_transf_64: Glycosyl transferase family 64 do | 90.62 | |
| PLN02190 | 756 | cellulose synthase-like protein | 90.62 | |
| KOG4315|consensus | 455 | 90.11 | ||
| cd06915 | 223 | NTP_transferase_WcbM_like WcbM_like is a subfamily | 89.67 | |
| PF03214 | 348 | RGP: Reversibly glycosylated polypeptide; InterPro | 89.63 | |
| PF13733 | 136 | Glyco_transf_7N: N-terminal region of glycosyl tra | 89.21 | |
| TIGR00466 | 238 | kdsB 3-deoxy-D-manno-octulosonate cytidylyltransfe | 88.26 | |
| PLN02436 | 1094 | cellulose synthase A | 88.24 | |
| PRK10018 | 279 | putative glycosyl transferase; Provisional | 88.14 | |
| PLN03180 | 346 | reversibly glycosylated polypeptide; Provisional | 87.56 | |
| PF12804 | 160 | NTP_transf_3: MobA-like NTP transferase domain; PD | 86.78 | |
| PF03498 | 150 | CDtoxinA: Cytolethal distending toxin A/C family; | 86.55 | |
| COG1209 | 286 | RfbA dTDP-glucose pyrophosphorylase [Cell envelope | 86.49 | |
| PF01762 | 195 | Galactosyl_T: Galactosyltransferase; InterPro: IPR | 86.45 | |
| PLN02917 | 293 | CMP-KDO synthetase | 84.06 | |
| COG1208 | 358 | GCD1 Nucleoside-diphosphate-sugar pyrophosphorylas | 83.3 | |
| PLN02400 | 1085 | cellulose synthase | 83.05 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 82.09 | |
| cd02540 | 229 | GT2_GlmU_N_bac N-terminal domain of bacterial GlmU | 81.3 | |
| cd04182 | 186 | GT_2_like_f GT_2_like_f is a subfamily of the glyc | 81.3 | |
| cd04195 | 201 | GT2_AmsE_like GT2_AmsE_like is involved in exopoly | 81.0 | |
| cd02517 | 239 | CMP-KDO-Synthetase CMP-KDO synthetase catalyzes th | 80.88 | |
| PRK05450 | 245 | 3-deoxy-manno-octulosonate cytidylyltransferase; P | 80.65 | |
| PLN02915 | 1044 | cellulose synthase A [UDP-forming], catalytic subu | 80.47 |
| >KOG3736|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-100 Score=860.65 Aligned_cols=480 Identities=49% Similarity=0.866 Sum_probs=433.1
Q ss_pred CCHhhhhhhhcCccccCcceeeecccCCCCCCCCCCcccccc-ccCCCCCCcEEEEEEeCCCChHHHHHHHHHHHhcCcc
Q psy1765 3 LNEQDLITRDEGYRYYGFNALISNKLSLDRKIPDTRNSLCAN-QTFPSTLPSTSVIICFYNEHPATLYRSVQTLLSRTGQ 81 (867)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~r~~~c~~-~~~~~~~P~vSVIIp~yNe~~~~l~~~l~Svl~qt~~ 81 (867)
.+++++++.+.++++++||+++||+|+++|++||+|++.|+. ..|.+.+|.+||||++|||++++|.++|+||+++|++
T Consensus 92 ~~~~~~~~~~~~~~~~~~N~~~Sd~I~l~Rsl~D~r~~~C~~~~~~~~~Lp~~Svii~f~nE~~s~llRtv~Svi~rtp~ 171 (578)
T KOG3736|consen 92 LPEAEEDLEDEGYEKNAFNALLSDRISLNRSLPDLRHPECKKLKYYSDKLPTTSVIIIFHNEAWSTLLRTVHSVINRTPP 171 (578)
T ss_pred CCcchHHHHHHHhhcccchhhhhhcccccCCCcchhchhhhhccccccccCCCceEEEEecCCCcchhheEEeehccCCh
Confidence 457888899999999999999999999999999999999987 5556779999999999999999999999999999999
Q ss_pred ccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHHHhhhhhhhhccccccccceeEEEEEeCCCCCC
Q psy1765 82 SLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRARMFGAKYATGKNRIQSLLHEIILVNDFSEYP 161 (867)
Q Consensus 82 ~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~ 161 (867)
.++.|||||||+|+.+
T Consensus 172 ~lLkEIiLVdD~S~~~---------------------------------------------------------------- 187 (578)
T KOG3736|consen 172 YLLKEIILVDDFSDRD---------------------------------------------------------------- 187 (578)
T ss_pred hHeEEEEEeecCcchh----------------------------------------------------------------
Confidence 9999999999999988
Q ss_pred cCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhcCCCEEEEEcCCcccCccchHHHHHHHHhcCCceeeeEEe
Q psy1765 162 SNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIID 241 (867)
Q Consensus 162 ~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A~Gd~llfLDaD~~v~p~wLe~Ll~~l~~~~~~vv~p~i~ 241 (867)
++...+++|++.+ ..|++++++++.|+++||++|++.|+||+++|||+||+++.+||++||+.+.+++..+|+|+|+
T Consensus 188 -~l~~~Ld~y~k~~--~~v~i~r~~~R~GLIrARl~GA~~A~geVL~FLDsHcE~n~gWLePLL~~I~~~r~tvv~PvID 264 (578)
T KOG3736|consen 188 -HLKDKLEEYVKRF--SKVRILRTKKREGLIRARLLGASMATGEVLTFLDSHCEVNVGWLEPLLARIAEDRKTVVCPVID 264 (578)
T ss_pred -hhhhhhHHHHhhh--cceeEEeecchhhhHHHHhhhhhhhhchheeeeecceeEecCcchHHHHHhhhcCceeecceEE
Confidence 4455688898887 4599999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCceecc-ccccccccccccccccccCCcCcCCCCCCCCCcccccccccceEeEeHHHHHHhCCCCCCCCCCcccc
Q psy1765 242 IINADTFQYTS-SALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGEN 320 (867)
Q Consensus 242 ~i~~~~~~~~~-~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED 320 (867)
.|+.++|+|.. ....+|+|+|.+.|+|..+|..+..++..++.|+++|+|+||+|+|+|++|.++|+||++|.+||||+
T Consensus 265 ~Id~~tf~y~~~~~~~rGgFdW~l~f~w~~lP~~~~~~~~~~t~PirsPtMaGglFAI~r~yF~eiG~yD~gMdiwGGEN 344 (578)
T KOG3736|consen 265 VIDDNTFEYEKQSELMRGGFDWELTFKWERLPLPEEKRRELPTDPIRSPTMAGGLFAIDRKYFGELGSYDEGMDIWGGEN 344 (578)
T ss_pred eecCcCceecccCccceeeeecceeEEeccCCccHhhcccCCCCCcCCcccCCceEEeeHHHHhhccCccccccccChhh
Confidence 99999999998 68999999999999999999998888888899999999999999999999999999999999999999
Q ss_pred hHHHHHHHHcCCeEEEEcccEEEEEeccCCCCCCCCCCchhhhhhHHHHHhcHHHHHHHHhhcCCCcCCCCCCCchhHHH
Q psy1765 321 LELSFRIWMCGGSLAMIPCSRIGHVFRSRRPYNNGHNEDPLTRNSLRVAHVWMDEYIEHFLKQRPEARNIDYGDVTDRKQ 400 (867)
Q Consensus 321 ~Dls~Rl~~~G~~i~~~P~s~V~H~~r~~~~y~~~~~~~~~~rN~~R~a~~w~d~~~~~~y~~~p~~~~~~~gdi~~r~~ 400 (867)
+|||||+|+||++++++|||+|+|+||++.||.+|...
T Consensus 345 lElSfrvWqCGG~lei~PCSrVGHifRk~~pY~~p~~~------------------------------------------ 382 (578)
T KOG3736|consen 345 LELSFRVWQCGGRLEIVPCSRVGHIFRKRKPYTFPDGT------------------------------------------ 382 (578)
T ss_pred ceeeEEEeccCCeEEecCccceeeeeecCCCccCCCcc------------------------------------------
Confidence 99999999999999999999999999999999874321
Q ss_pred HHHHcCCcccccccccccCCCcCCCchHHHHhhhhccccCCCCCCCccccccccCceeEEEeecchhhhhhhccCcccCC
Q psy1765 401 LRARLGCKSFKWYLDNVYPEMILPSDDEERLKKKWAQVEQPKFQPWYSRARNYTNSLRVAHVWMDEYIEHFLKQRPEARN 480 (867)
Q Consensus 401 lr~~l~ck~F~Wyl~~v~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~s~~~~~~N~~R~aeVWmDeyk~~~y~~~p~~~~ 480 (867)
. ...||++|||||||||||++||.++|.+++
T Consensus 383 ---------------------------~----------------------~~~~N~~RlAeVWmDeyK~~~y~~~P~~~~ 413 (578)
T KOG3736|consen 383 ---------------------------D----------------------TATRNLKRLAEVWMDEYKEQFYKRMPGLRN 413 (578)
T ss_pred ---------------------------h----------------------hhhhchhhhhhhhhHHHHHHHHhhCccccc
Confidence 0 013589999999999999999999999999
Q ss_pred CCccCCchhHhhhhhccccccccccccccCccccCCCcHHHHhhhhhcccCCCcccccccccccccceeeeecCCCceec
Q psy1765 481 IDYGDVTDRKQLRARLGCKSFKWYLDNVYPEMILPSDDEERLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSSTDLCLT 560 (867)
Q Consensus 481 ~~~gdis~r~~LR~~l~CksF~Wyl~nv~p~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~rn~~~~g~ir~~~~~~CLD 560 (867)
+++||||+|++||+||+||||+|||+|||||+++|...+ ++.|.|++..++.|+|
T Consensus 414 ~d~GDvseR~~LR~~L~CKsFkWyL~nVyPel~~~~~~~-------------------------~~~G~i~~~~~~~cld 468 (578)
T KOG3736|consen 414 IDEGDLTERKALRERLNCKSFKWYLENVYPELYLPTPHV-------------------------YASGEIRNGNPNLCLD 468 (578)
T ss_pred cCCCCchhHHHHHHhcCCccccchHhhcCccccCCCCcc-------------------------cccceeccCCcchhhh
Confidence 999999999999999999999999999999999997652 3456777878999999
Q ss_pred ccCCC-CCCCcEEEEecCCCCCCceeeecCCCceEEeeceeeec-CCCccEEEeCCCCCCCcceeeeeeeccceeeeccc
Q psy1765 561 SKVDK-TKGSPLVLKKCDELSKTQHWSKTDKSELVLAELLCLDA-GATKPKLTKCHEMGGSQEYWCWLRCKSFKWYLDNV 638 (867)
Q Consensus 561 ~~~~~-~~g~~v~l~~C~~~~~~Q~w~~t~~~~i~~~~~~CLd~-~g~~v~l~~C~~~~~~Q~~w~~~~~~~~~~~~~~~ 638 (867)
..... ..|..+++++||+.+++|.|.||+.++|+.+. .|||+ ..+.|+|..||+++ ||.| .|.
T Consensus 469 ~~~~~~~~~~~~~~~~Ch~~~~~Q~~~yT~~~eir~~~-~cl~~~~~~~v~l~~C~~~~-~q~w-~~~------------ 533 (578)
T KOG3736|consen 469 TERAPAGQGMAVGLYPCHGPGGNQYFPYTKQGEIRIGD-LCLDVDDAGKVTLYDCHKMG-NQLW-HYD------------ 533 (578)
T ss_pred hhchhccCCCcceEecCCCccccccccccCCcceEECC-EEeccccCCceEEEeccccc-ccce-EEc------------
Confidence 88632 23789999999999999999999999999866 99998 44449999999977 7765 331
Q ss_pred CcccccCCChhhhhhhhhccccCCCCCcccccccccccceEEEecCCCceEeecCCCCCCCceEEecCCCCCCCccEEEc
Q psy1765 639 YPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSGTDLCLTSKVDKTKGSPLVLKKCDELSKTQRWSKT 718 (867)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~~~~~~~~~i~~~~sg~CLd~~~~~~~g~~v~l~~C~~~~~~Q~W~~~ 718 (867)
. .++|+|..||+||++... ..+ +.+..|+.++..|+|.|.
T Consensus 534 ------------------------------------~-~~~i~~~~sg~CL~~~~~-~~~--~~l~~c~~~~~~Q~W~~~ 573 (578)
T KOG3736|consen 534 ------------------------------------K-DGTLYHRNSGKCLEAAVD-KNG--LILVACDPSDPTQQWLFE 573 (578)
T ss_pred ------------------------------------C-CCceEcCCCCccccccCC-CCC--ceEeecCCCCCcceEEEE
Confidence 1 278999999999998432 222 899999997889999997
Q ss_pred cC
Q psy1765 719 DK 720 (867)
Q Consensus 719 ~~ 720 (867)
..
T Consensus 574 ~~ 575 (578)
T KOG3736|consen 574 HV 575 (578)
T ss_pred ec
Confidence 54
|
|
| >KOG3738|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-97 Score=773.45 Aligned_cols=472 Identities=44% Similarity=0.807 Sum_probs=413.8
Q ss_pred hhhhcCccccCcceeeecccCCCCCCCCCCccccccccCCCCCCcEEEEEEeCCCChHHHHHHHHHHHhcCccccccEEE
Q psy1765 9 ITRDEGYRYYGFNALISNKLSLDRKIPDTRNSLCANQTFPSTLPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEII 88 (867)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~r~~~c~~~~~~~~~P~vSVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiI 88 (867)
+..++.|+.+.||+..||.+.-+|.+||+||++|....|..+||..||||.+|||+.+.|+++|.||++++|+++++|||
T Consensus 81 ~~Ged~y~~~~fnq~esd~l~~~r~i~dtRh~qC~~~~y~~dlp~TsviITfHNEARS~LLRTv~SvlnrsP~~li~EiI 160 (559)
T KOG3738|consen 81 HQGEDPYKANSFNQEESDKLNPTRKIPDTRHPQCRDVDYKVDLPPTSVIITFHNEARSTLLRTVVSVLNRSPEHLIHEII 160 (559)
T ss_pred cCCCchhhcCccchhhhhhhCCCCccccccccccccceeecCCCCceEEEEeccHHHHHHHHHHHHHHcCChHHhhheeE
Confidence 34677899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHHHhhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHH
Q psy1765 89 LVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEV 168 (867)
Q Consensus 89 lVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l 168 (867)
||||+|.|.. .
T Consensus 161 LVDD~S~Dpe---------------------------------------------------------------------d 171 (559)
T KOG3738|consen 161 LVDDFSQDPE---------------------------------------------------------------------D 171 (559)
T ss_pred EecCCCCChH---------------------------------------------------------------------H
Confidence 9999999871 1
Q ss_pred HHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhcCCCEEEEEcCCcccCccchHHHHHHHHhcCCceeeeEEeeecCCCc
Q psy1765 169 ESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTF 248 (867)
Q Consensus 169 ~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A~Gd~llfLDaD~~v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~~~ 248 (867)
...+.+. ++|+++|+.++.|+++.|+.|+..|+|.++.|||+||+++.+||++||++++++.+.+|+|+|+.|+.++|
T Consensus 172 ~~~L~ri--~kvr~LRN~~ReGLirSRvrGAdvA~a~vltFLDSHcEvN~~WLePLL~Rvaed~trvVsPiiDvIn~dnf 249 (559)
T KOG3738|consen 172 GKLLKRI--PKVRVLRNNEREGLIRSRVRGADVAQATVLTFLDSHCEVNEGWLEPLLERVAEDTTRVVSPIIDVINLDNF 249 (559)
T ss_pred HHHHhhh--heeeeecccchhhhhhhhccccccccceEEEEEecceeecchhhHHHHHHHhhcccceeeccccccccccc
Confidence 1222333 79999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccc-cccccccccccccccccCCcCcCCCCCCCCCcccccccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHH
Q psy1765 249 QYTSS-ALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRI 327 (867)
Q Consensus 249 ~~~~~-~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl 327 (867)
.|... ...+|||+|.++|+|..........+.+++.|+++|+++||.|+|+|++|+++|.||..|.+||||++|++||+
T Consensus 250 ~Y~~asadLrGGFDWsLhF~We~~~~eqr~sr~~Pt~PirtP~iAGGlfvidk~wF~~LGkyd~~mdiWGGEn~Elsfrv 329 (559)
T KOG3738|consen 250 SYVGASADLRGGFDWSLHFKWEQMQLEQRESRADPTAPIRTPAIAGGLFVIDKEWFNELGKYDMDMDIWGGENLELSFRV 329 (559)
T ss_pred ccccchhhhcCCcceEEEEEehhcCHHHHhhccCCCCcccCccccceeEEecHHHHHHhcccCccccccCCcceEEEEEE
Confidence 99864 57899999999999998887777777889999999999999999999999999999999999999999999999
Q ss_pred HHcCCeEEEEcccEEEEEeccCCCCCCCCCCchhhhhhHHHHHhcHHHHHHHHhhcCCCcCCCCCCCchhHHHHHHHcCC
Q psy1765 328 WMCGGSLAMIPCSRIGHVFRSRRPYNNGHNEDPLTRNSLRVAHVWMDEYIEHFLKQRPEARNIDYGDVTDRKQLRARLGC 407 (867)
Q Consensus 328 ~~~G~~i~~~P~s~V~H~~r~~~~y~~~~~~~~~~rN~~R~a~~w~d~~~~~~y~~~p~~~~~~~gdi~~r~~lr~~l~c 407 (867)
|+||+.++++|||||+|+||++|||.+|.+...
T Consensus 330 W~CGGslEIvPCSRVGHVFRkrHpy~FP~gs~~----------------------------------------------- 362 (559)
T KOG3738|consen 330 WQCGGSLEIVPCSRVGHVFRKRHPYTFPGGSGN----------------------------------------------- 362 (559)
T ss_pred EeeCCeeEEEeccchhhhhhccCCCcCCCCCCc-----------------------------------------------
Confidence 999999999999999999999999998654211
Q ss_pred cccccccccccCCCcCCCchHHHHhhhhccccCCCCCCCccccccccCceeEEEeecchhhhhhhccCcccCCCCccCCc
Q psy1765 408 KSFKWYLDNVYPEMILPSDDEERLKKKWAQVEQPKFQPWYSRARNYTNSLRVAHVWMDEYIEHFLKQRPEARNIDYGDVT 487 (867)
Q Consensus 408 k~F~Wyl~~v~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~s~~~~~~N~~R~aeVWmDeyk~~~y~~~p~~~~~~~gdis 487 (867)
.+.||++|+|||||||||++||..+|.++.+.||+|.
T Consensus 363 -------------------------------------------ty~~NTkr~AEvWmDEYK~~yyaarPsAr~vpfg~i~ 399 (559)
T KOG3738|consen 363 -------------------------------------------TYIKNTKRAAEVWMDEYKNYYYAARPSARRVPFGNIY 399 (559)
T ss_pred -------------------------------------------chhhcchHHHHHHHHHHHHHHHhcCchhhcCCCccHH
Confidence 1246999999999999999999999999999999999
Q ss_pred hhHhhhhhccccccccccccccCccccCCCcHHHHhhhhhcccCCCcccccccccccccceeeeecCCCceecccCCCCC
Q psy1765 488 DRKQLRARLGCKSFKWYLDNVYPEMILPSDDEERLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSSTDLCLTSKVDKTK 567 (867)
Q Consensus 488 ~r~~LR~~l~CksF~Wyl~nv~p~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~rn~~~~g~ir~~~~~~CLD~~~~~~~ 567 (867)
+|.+||++|+||||+|||+|||||+.+|.+... +.|.++ ....|||+.+..+.
T Consensus 400 ~rL~~Rk~l~CksFkWYLenVyPeL~ip~~~~~-------------------------~~g~lr--qg~~Cl~s~~~~~~ 452 (559)
T KOG3738|consen 400 DRLELRKKLRCKSFKWYLENVYPELRIPFKELI-------------------------ATGTLR--QGDNCLDSQGQNSQ 452 (559)
T ss_pred HHHHHHhhcCCcchhhhhhhcCcceeccccccc-------------------------cccchh--ccchhhhhhhcccc
Confidence 999999999999999999999999999987641 234444 47789999875444
Q ss_pred CCcEEEEecCCCCCCceeeecCCCceEEeeceeeecCCCccEEEeCCCCCCCcceeeeeeeccceeeecccCcccccCCC
Q psy1765 568 GSPLVLKKCDELSKTQHWSKTDKSELVLAELLCLDAGATKPKLTKCHEMGGSQEYWCWLRCKSFKWYLDNVYPEMILPSD 647 (867)
Q Consensus 568 g~~v~l~~C~~~~~~Q~w~~t~~~~i~~~~~~CLd~~g~~v~l~~C~~~~~~Q~~w~~~~~~~~~~~~~~~~~~~~~~~~ 647 (867)
+ .++|+.||+.++||+|.+....
T Consensus 453 ~-~~gl~~C~~s~~nqqwa~~~t~-------------------------------------------------------- 475 (559)
T KOG3738|consen 453 E-ALGLASCHGSGGNQQWAFLRTS-------------------------------------------------------- 475 (559)
T ss_pred c-CcceeecccCCCCcchhhhhhh--------------------------------------------------------
Confidence 4 5677777777767776652110
Q ss_pred hhhhhhhhhccccCCCCCcccccccccccceEEEecCCCceEeecCCCCCCCceEEecCCCCCCCccEEEccCCcEEecc
Q psy1765 648 DEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSGTDLCLTSKVDKTKGSPLVLKKCDELSKTQRWSKTDKSELVLAE 727 (867)
Q Consensus 648 ~~~~~~~~~~~~~~~~~q~W~~~~~~~~~~~~i~~~~sg~CLd~~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~~~~~~~s 727 (867)
... +....+||++. +..+|++|.|..|..+.+.|+|.-.........+
T Consensus 476 -----------------------------~~~--~~~~elCL~v~-~~~pg~~v~l~~C~~~e~~q~~v~~~~~l~h~~s 523 (559)
T KOG3738|consen 476 -----------------------------TQL--ITHRELCLAVG-SNTPGSPVALVPCGNNETKQRWVELGGHLLHAGS 523 (559)
T ss_pred -----------------------------hhH--HHHHhhhheee-cCCCCCeEEEEecCCCCCceEEEecCCchhcccc
Confidence 011 13468999984 4568999999999987889999988888888889
Q ss_pred CceeeeC--CC-CcEEEecCCCCCCCeEEEecC
Q psy1765 728 LLCLDAG--AT-KPKLTKCHEMGGSQEWNFVLR 757 (867)
Q Consensus 728 ~~CLD~~--g~-~v~~~~C~~~~~~Q~W~~~~~ 757 (867)
++|||.. |. .+.+.+|..+..+|+|.|...
T Consensus 524 ~KOGd~~~~g~~~l~~~~C~~~~~sQ~w~f~~~ 556 (559)
T KOG3738|consen 524 HLCLDNPLKGRWLLEVSTCESHLVSQSWQFALE 556 (559)
T ss_pred cceeccccCCCcceeecccccccccceeeeehh
Confidence 9999986 33 578999987767899998743
|
|
| >KOG3737|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-90 Score=721.92 Aligned_cols=489 Identities=38% Similarity=0.710 Sum_probs=428.9
Q ss_pred CCCCHhhhhhhhcCccccCcceeeecccCCCCCCCCCCccccccccCCCCCCcEEEEEEeCCCChHHHHHHHHHHHhcCc
Q psy1765 1 MVLNEQDLITRDEGYRYYGFNALISNKLSLDRKIPDTRNSLCANQTFPSTLPSTSVIICFYNEHPATLYRSVQTLLSRTG 80 (867)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~r~~~c~~~~~~~~~P~vSVIIp~yNe~~~~l~~~l~Svl~qt~ 80 (867)
.+++++.+...+.+-+++|||.++||.|+++|.++|+|.++|+.-.||.++|++||||+||||.++.|.++++||+.+++
T Consensus 104 ~~l~pe~k~a~~AsekEfGfN~~~SDmISm~R~v~D~R~EECkhWdYpe~Lpt~SVviVFHNEGws~LmRTVHSVi~RsP 183 (603)
T KOG3737|consen 104 LVLGPEFKQAIQASEKEFGFNMVASDMISMDRNVNDLRQEECKHWDYPENLPTSSVVIVFHNEGWSTLMRTVHSVIKRSP 183 (603)
T ss_pred cccChhHHHHHHHHHHhhCcceeehhhhhcccCccccCHhhccccCCcccCCcceEEEEEecCccHHHHHHHHHHHhcCc
Confidence 36788888888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHHHhhhhhhhhccccccccceeEEEEEeCCCCC
Q psy1765 81 QSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRARMFGAKYATGKNRIQSLLHEIILVNDFSEY 160 (867)
Q Consensus 81 ~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std 160 (867)
+.++.|||+|||.|+.+
T Consensus 184 ~~~l~eivlvDDfSdKe--------------------------------------------------------------- 200 (603)
T KOG3737|consen 184 RKYLAEIVLVDDFSDKE--------------------------------------------------------------- 200 (603)
T ss_pred HHhhheEEEeccCCccH---------------------------------------------------------------
Confidence 99999999999999988
Q ss_pred CcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhcCCCEEEEEcCCcccCccchHHHHHHHHhcCCceeeeEE
Q psy1765 161 PSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPII 240 (867)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A~Gd~llfLDaD~~v~p~wLe~Ll~~l~~~~~~vv~p~i 240 (867)
++++.|++|+... ...|+++|++++.|++.||-+|+..|+|++|+||||||+++.+||.+||+.+.++++.+.+|+|
T Consensus 201 --hLkekLDeYv~~f-nGlVkV~Rne~REGLI~aRSiGA~~atGeV~ifLDAHCEVntNWlpPLlAPI~rdRtvmTVP~I 277 (603)
T KOG3737|consen 201 --HLKEKLDEYVKLF-NGLVKVFRNERREGLIQARSIGAQKATGEVLIFLDAHCEVNTNWLPPLLAPISRDRTVMTVPLI 277 (603)
T ss_pred --HHHHHHHHHHHHh-cCEEEEEecchhhhhhhhhccchhhccccEEEEEecceeeecccccccccccccCceEEEEeee
Confidence 6788899999887 4589999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCceeccc-----cccccccccccccccccCCcCcCCCCCCCCCcccccccccceEeEeHHHHHHhCCCCCCCCC
Q psy1765 241 DIINADTFQYTSS-----ALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEI 315 (867)
Q Consensus 241 ~~i~~~~~~~~~~-----~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~airR~~f~~vGgfDe~~~~ 315 (867)
+.||.++++|... .-.+|.|.|.+.++...+++.+...+.....|+++|+++||+|+|.|++|.++|.||+++.+
T Consensus 278 DgId~n~~EyrpvyG~dn~h~rGifeWgmLyKe~~~t~rE~r~RkhnsePyRSPthAGGLfAInRe~F~ELG~YDpgLqi 357 (603)
T KOG3737|consen 278 DGIDGNTYEYRPVYGGDNDHARGIFEWGMLYKEVPLTPREKRLRKHNSEPYRSPTHAGGLFAINREFFFELGLYDPGLQI 357 (603)
T ss_pred eeecCCceEEeeccCCcchhhcchhhhhheeccCCCCHHHHHhhhccCCCCCCcccccceeeehHHHHHHhccCCCccee
Confidence 9999999999742 25688999999888888888777777777899999999999999999999999999999999
Q ss_pred CcccchHHHHHHHHcCCeEEEEcccEEEEEeccCCCCCCCCCCchhhhhhHHHHHhcHHHHHHHHhhcCCCcCCCCCCCc
Q psy1765 316 WGGENLELSFRIWMCGGSLAMIPCSRIGHVFRSRRPYNNGHNEDPLTRNSLRVAHVWMDEYIEHFLKQRPEARNIDYGDV 395 (867)
Q Consensus 316 ~G~ED~Dls~Rl~~~G~~i~~~P~s~V~H~~r~~~~y~~~~~~~~~~rN~~R~a~~w~d~~~~~~y~~~p~~~~~~~gdi 395 (867)
||||++||+|+||+||++|.++|||+|+|++|..-||.+.. .|
T Consensus 358 WGGEnfElSfKIWQCGG~i~fVPCSrVGHvYR~~mpy~fgk---------------------------~~---------- 400 (603)
T KOG3737|consen 358 WGGENFELSFKIWQCGGKILFVPCSRVGHVYRSLMPYQFGK---------------------------PP---------- 400 (603)
T ss_pred ecCcceeEEEEEEeeCCEEEEEEccccchhhhccccccCCC---------------------------Cc----------
Confidence 99999999999999999999999999999999988886411 00
Q ss_pred hhHHHHHHHcCCcccccccccccCCCcCCCchHHHHhhhhccccCCCCCCCccccccccCceeEEEeecchhhhhhhccC
Q psy1765 396 TDRKQLRARLGCKSFKWYLDNVYPEMILPSDDEERLKKKWAQVEQPKFQPWYSRARNYTNSLRVAHVWMDEYIEHFLKQR 475 (867)
Q Consensus 396 ~~r~~lr~~l~ck~F~Wyl~~v~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~s~~~~~~N~~R~aeVWmDeyk~~~y~~~ 475 (867)
.++ .| +-...|++||.|+||||||+|||.+.
T Consensus 401 -------------------------~k~-----------------------~~-p~i~iNy~RVvetW~Ddyk~Yfytre 431 (603)
T KOG3737|consen 401 -------------------------IKV-----------------------GS-PPILINYVRVVETWWDDYKDYFYTRE 431 (603)
T ss_pred -------------------------ccc-----------------------CC-CceEeehhhHHHHHHHhhhhheeecC
Confidence 000 00 01346999999999999999999999
Q ss_pred cccCCCCccCCchhHhhhhhccccccccccccccCccc--cCCCcHHHHhhhhhcccCCCcccccccccccccceeeeec
Q psy1765 476 PEARNIDYGDVTDRKQLRARLGCKSFKWYLDNVYPEMI--LPSDDEERLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLS 553 (867)
Q Consensus 476 p~~~~~~~gdis~r~~LR~~l~CksF~Wyl~nv~p~~~--~p~~~~~~~~~~~~~~~~~~~~~~~g~~rn~~~~g~ir~~ 553 (867)
|+++.+++||||++++||++|+||||||||++|+-++. +|- .|++-.| |++|+.
T Consensus 432 P~a~~l~~GDISeqlalr~~lnCkSFkWfMe~iAYDv~~~yP~--------------lP~N~~W----------GE~R~~ 487 (603)
T KOG3737|consen 432 PEAQALPYGDISEQLALREDLNCKSFKWFMEEIAYDVTSHYPL--------------LPKNVDW----------GEIRGF 487 (603)
T ss_pred hhhccCCcccHHHHHHhHhhcCCchhHHHHHHHHHHHHhcCCC--------------CCCCCcc----------hhccCc
Confidence 99999999999999999999999999999999976644 221 1333334 567778
Q ss_pred CCCceecccCCCCCCCcEEEEecCCCCCCceeeecCCCceEEeeceeeecCCCccEEEeCCCCCCCcceeeeeeecccee
Q psy1765 554 STDLCLTSKVDKTKGSPLVLKKCDELSKTQHWSKTDKSELVLAELLCLDAGATKPKLTKCHEMGGSQEYWCWLRCKSFKW 633 (867)
Q Consensus 554 ~~~~CLD~~~~~~~g~~v~l~~C~~~~~~Q~w~~t~~~~i~~~~~~CLd~~g~~v~l~~C~~~~~~Q~~w~~~~~~~~~~ 633 (867)
+++.|||++|. ++|+.+++-+||+.++||.+.++..|++.. ...||++.|.++++-.|.-..-+-. |.|
T Consensus 488 at~~ClDsMG~-~p~g~mglt~CHg~GgNQL~RlN~agQl~q-ge~CltAdg~~i~~~hC~lgtv~g~-WqY-------- 556 (603)
T KOG3737|consen 488 ATAYCLDSMGK-TPGGFMGLTPCHGMGGNQLFRLNEAGQLMQ-GEQCLTADGSKIMITHCNLGTVKGE-WQY-------- 556 (603)
T ss_pred ccchhHHhcCC-CCCCccccccccCCCCceEEEeccccchhc-cceeeecCCceEEEEEeecccccCc-eeh--------
Confidence 99999999974 789999999999999999999999999865 4599999999999999974322111 333
Q ss_pred eecccCcccccCCChhhhhhhhhccccCCCCCcccccccccccceEEEecCCCceEeecCCCCCCCceEEecCCCCCCCc
Q psy1765 634 YLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSGTDLCLTSKVDKTKGSPLVLKKCDELSKTQ 713 (867)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~~~~~~~~~i~~~~sg~CLd~~~~~~~g~~v~l~~C~~~~~~Q 713 (867)
.. ...+++|..+++||+.+. .+.+|.+..|+.+...|
T Consensus 557 ------------------------------------~~----~tk~~~H~~~~kC~~~se---~~~qv~l~~Cd~~~~~Q 593 (603)
T KOG3737|consen 557 ------------------------------------FK----NTKRFTHIPSGKCLDRSE---VLHQVFLSNCDSSKTTQ 593 (603)
T ss_pred ------------------------------------hh----cchheeeccccccccccc---hhheeeecccCCCchhh
Confidence 22 136788999999999843 35789999999988899
Q ss_pred cEEEcc
Q psy1765 714 RWSKTD 719 (867)
Q Consensus 714 ~W~~~~ 719 (867)
+|.+..
T Consensus 594 kw~~ke 599 (603)
T KOG3737|consen 594 KWEMKE 599 (603)
T ss_pred eeehhh
Confidence 998864
|
|
| >cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-50 Score=443.15 Aligned_cols=297 Identities=59% Similarity=1.010 Sum_probs=254.6
Q ss_pred EEEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHHHhhhh
Q psy1765 55 SVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRARMFG 134 (867)
Q Consensus 55 SVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~a~~~g 134 (867)
|||||+||++...|.+||+||++|+++....|||||||+|+|++
T Consensus 1 SIIIp~~N~~~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t------------------------------------ 44 (299)
T cd02510 1 SVIIIFHNEALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPE------------------------------------ 44 (299)
T ss_pred CEEEEEecCcHHHHHHHHHHHHhcCchhcCCEEEEEECCCCchH------------------------------------
Confidence 79999999883599999999999998765459999999999883
Q ss_pred hhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhcCCCEEEEEcCCc
Q psy1765 135 AKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLVFLDSHI 214 (867)
Q Consensus 135 ~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A~Gd~llfLDaD~ 214 (867)
.+.+.++......+.|+++++++|.|+++|+|.|+++|+||||+|||+|+
T Consensus 45 ------------------------------~~~~~~~~~~~~~~~v~vi~~~~n~G~~~a~N~g~~~A~gd~i~fLD~D~ 94 (299)
T cd02510 45 ------------------------------LKLLLEEYYKKYLPKVKVLRLKKREGLIRARIAGARAATGDVLVFLDSHC 94 (299)
T ss_pred ------------------------------HHHHHHHHHhhcCCcEEEEEcCCCCCHHHHHHHHHHHccCCEEEEEeCCc
Confidence 12222222222236899999999999999999999999999999999999
Q ss_pred ccCccchHHHHHHHHhcCCceeeeEEeeecCCCceeccccc-cccccccccccccccCCcCcCCCCCCCCCccccccccc
Q psy1765 215 EVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSAL-VRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMAG 293 (867)
Q Consensus 215 ~v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~~~~~~~~~~-~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~G 293 (867)
+++|+||++|++.+.+++..+++|.+..++...+.+..... ..+++.|.+.+.|........ .......+.++++++|
T Consensus 95 ~~~~~wL~~ll~~l~~~~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g 173 (299)
T cd02510 95 EVNVGWLEPLLARIAENRKTVVCPIIDVIDADTFEYRGSSGDARGGFDWSLHFKWLPLPEEER-RRESPTAPIRSPTMAG 173 (299)
T ss_pred ccCccHHHHHHHHHHhCCCeEEEeeeccccCCCeeEecCCCceeEEecccceeccccCCHHHh-hhcCCCCCccCccccc
Confidence 99999999999999999999999999888887777765443 567788887777654433322 1222335667889999
Q ss_pred ceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEcccEEEEEec-cCCCCCCCCCCchhhhhhHHHHHhc
Q psy1765 294 GLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGHVFR-SRRPYNNGHNEDPLTRNSLRVAHVW 372 (867)
Q Consensus 294 ~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V~H~~r-~~~~y~~~~~~~~~~rN~~R~a~~w 372 (867)
+||+|||++|+++|||||+|..||+||+|||+|++++|+++.++|+++|.|+++ .+.+|..+.....+.+|..|++++|
T Consensus 174 ~~~~irr~~~~~vGgfDe~~~~~~~ED~Dl~~R~~~~G~~i~~~p~a~v~H~~~~~~~~~~~~~~~~~~~~n~~r~~~~w 253 (299)
T cd02510 174 GLFAIDREWFLELGGYDEGMDIWGGENLELSFKVWQCGGSIEIVPCSRVGHIFRRKRKPYTFPGGSGTVLRNYKRVAEVW 253 (299)
T ss_pred eeeEEEHHHHHHhCCCCCcccccCchhHHHHHHHHHcCCeEEEeeccEEEEeccccCCCCCCCCcccHHHHHHHHHHHHH
Confidence 999999999999999999999998999999999999999999999999999999 7889887766557889999999999
Q ss_pred HHHHHHHHhhcCCCcCCCCCCCchhHHHHHHHcCCccccccccccc
Q psy1765 373 MDEYIEHFLKQRPEARNIDYGDVTDRKQLRARLGCKSFKWYLDNVY 418 (867)
Q Consensus 373 ~d~~~~~~y~~~p~~~~~~~gdi~~r~~lr~~l~ck~F~Wyl~~v~ 418 (867)
+++++.++|+.+|.+..+..||+.+|++++++|+||+|+||+++|+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~ 299 (299)
T cd02510 254 MDEYKEYFYKARPELRNIDYGDLSERKALRERLKCKSFKWYLENVY 299 (299)
T ss_pred HHHHHHHHHhcCcccccCCCCCHHHHHHHHHHcCCCCchHHHhhcC
Confidence 9999999999999988899999999999999999999999999874
|
UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins. |
| >cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.8e-27 Score=242.96 Aligned_cols=175 Identities=19% Similarity=0.320 Sum_probs=143.0
Q ss_pred CcEEEEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHHHh
Q psy1765 52 PSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRAR 131 (867)
Q Consensus 52 P~vSVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~a~ 131 (867)
|+||||||+|||+. .|.++|+||++|+|+++ |||||||+|+|++
T Consensus 1 p~vsviip~~n~~~-~l~~~L~sl~~q~~~~~--eiivVdd~s~d~t--------------------------------- 44 (196)
T cd02520 1 PGVSILKPLCGVDP-NLYENLESFFQQDYPKY--EILFCVQDEDDPA--------------------------------- 44 (196)
T ss_pred CCeEEEEecCCCCc-cHHHHHHHHHhccCCCe--EEEEEeCCCcchH---------------------------------
Confidence 78999999999887 89999999999999997 9999999999873
Q ss_pred hhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCc---hhHHhHhhhhcCCCEEE
Q psy1765 132 MFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGL---IRARMFGAKYATGKVLV 208 (867)
Q Consensus 132 ~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~---a~ArN~G~~~A~Gd~ll 208 (867)
.+.+.++.+.+...+++++..+.+.|. +.++|.|++.|+||||+
T Consensus 45 ---------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~n~g~~~a~~d~i~ 91 (196)
T cd02520 45 ---------------------------------IPVVRKLIAKYPNVDARLLIGGEKVGINPKVNNLIKGYEEARYDILV 91 (196)
T ss_pred ---------------------------------HHHHHHHHHHCCCCcEEEEecCCcCCCCHhHHHHHHHHHhCCCCEEE
Confidence 344556655552235778887767665 34678999999999999
Q ss_pred EEcCCcccCccchHHHHHHHHhcCCceeeeEEeeecCCCceeccccccccccccccccccccCCcCcCCCCCCCCCcccc
Q psy1765 209 FLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILS 288 (867)
Q Consensus 209 fLDaD~~v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~ 288 (867)
|+|+|+.++|+||+.+++.+.....++|++.
T Consensus 92 ~~D~D~~~~~~~l~~l~~~~~~~~~~~v~~~------------------------------------------------- 122 (196)
T cd02520 92 ISDSDISVPPDYLRRMVAPLMDPGVGLVTCL------------------------------------------------- 122 (196)
T ss_pred EECCCceEChhHHHHHHHHhhCCCCCeEEee-------------------------------------------------
Confidence 9999999999999999999865444555432
Q ss_pred cccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEcccEEEEEe
Q psy1765 289 PTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGHVF 346 (867)
Q Consensus 289 ~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V~H~~ 346 (867)
...|+++++||++|+++|||++-... .+||+||++|+..+|+++.++|++.++|..
T Consensus 123 -~~~g~~~~~r~~~~~~~ggf~~~~~~-~~eD~~l~~rl~~~G~~i~~~~~~~~~~~~ 178 (196)
T cd02520 123 -CAFGKSMALRREVLDAIGGFEAFADY-LAEDYFLGKLIWRLGYRVVLSPYVVMQPLG 178 (196)
T ss_pred -cccCceeeeEHHHHHhccChHHHhHH-HHHHHHHHHHHHHcCCeEEEcchheeccCC
Confidence 24467899999999999999863333 379999999999999999999998766643
|
UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment. |
| >COG1216 Predicted glycosyltransferases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-26 Score=254.40 Aligned_cols=220 Identities=24% Similarity=0.317 Sum_probs=162.4
Q ss_pred CCcEEEEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHHH
Q psy1765 51 LPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRA 130 (867)
Q Consensus 51 ~P~vSVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~a 130 (867)
+|++||||++||... .+.+||.|+.+|+++.. +||+|||+|+|++
T Consensus 2 ~~~i~~iiv~yn~~~-~l~~~l~~l~~~~~~~~--~iv~vDn~s~d~~-------------------------------- 46 (305)
T COG1216 2 MPKISIIIVTYNRGE-DLVECLASLAAQTYPDD--VIVVVDNGSTDGS-------------------------------- 46 (305)
T ss_pred CcceEEEEEecCCHH-HHHHHHHHHhcCCCCCc--EEEEccCCCCCCC--------------------------------
Confidence 689999999999655 99999999999999887 7778999999984
Q ss_pred hhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhcCCC---EE
Q psy1765 131 RMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGK---VL 207 (867)
Q Consensus 131 ~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A~Gd---~l 207 (867)
.+.+.. . ..+.|+++.+.+|.|+++|.|.|+++|.++ |+
T Consensus 47 ----------------------------------~~~~~~---~-~~~~v~~i~~~~NlG~agg~n~g~~~a~~~~~~~~ 88 (305)
T COG1216 47 ----------------------------------LEALKA---R-FFPNVRLIENGENLGFAGGFNRGIKYALAKGDDYV 88 (305)
T ss_pred ----------------------------------HHHHHh---h-cCCcEEEEEcCCCccchhhhhHHHHHHhcCCCcEE
Confidence 111111 1 027999999999999999999999999765 99
Q ss_pred EEEcCCcccCccchHHHHHHHHhcCCc-eeeeEEeeecCCCceeccccccccccccccccccccCCcCcCCCCCCCCCcc
Q psy1765 208 VFLDSHIEVNTHWLEPLLVPIAERTNT-VTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPI 286 (867)
Q Consensus 208 lfLDaD~~v~p~wLe~Ll~~l~~~~~~-vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~ 286 (867)
++||+|+.+++++|+.|++.+.+++.. +++|.+...+........ ++....+...+...+.......... .+.
T Consensus 89 l~LN~D~~~~~~~l~~ll~~~~~~~~~~~~~~~i~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 162 (305)
T COG1216 89 LLLNPDTVVEPDLLEELLKAAEEDPAAGVVGPLIRNYDESLYIDRR-----GGESDGLTGGWRASPLLEIAPDLSS-YLE 162 (305)
T ss_pred EEEcCCeeeChhHHHHHHHHHHhCCCCeEeeeeEecCCCCcchhee-----ccccccccccceecccccccccccc-hhh
Confidence 999999999999999999999998774 455555443322211111 1111111111111111111100010 011
Q ss_pred cccccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEcccEEEEEeccCC
Q psy1765 287 LSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGHVFRSRR 350 (867)
Q Consensus 287 ~~~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V~H~~r~~~ 350 (867)
-...+.|+||+|+|++|+++|+|||.|++| +||+|+|+|++++|+++.++|.+.|.|....+.
T Consensus 163 ~~~~~~G~~~li~~~~~~~vG~~de~~F~y-~eD~D~~~R~~~~G~~i~~~p~a~i~H~~g~s~ 225 (305)
T COG1216 163 VVASLSGACLLIRREAFEKVGGFDERFFIY-YEDVDLCLRARKAGYKIYYVPDAIIYHKIGSSK 225 (305)
T ss_pred hhhhcceeeeEEcHHHHHHhCCCCccccee-ehHHHHHHHHHHcCCeEEEeeccEEEEeccCCC
Confidence 112588999999999999999999999999 999999999999999999999999999765543
|
|
| >cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-26 Score=237.37 Aligned_cols=197 Identities=20% Similarity=0.301 Sum_probs=146.3
Q ss_pred CcEEEEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHHHh
Q psy1765 52 PSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRAR 131 (867)
Q Consensus 52 P~vSVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~a~ 131 (867)
|++|||||+||++.+.|.+||+||++|+++.+ |||||||||+|++
T Consensus 1 p~vsiii~~~n~~~~~l~~~l~sl~~q~~~~~--eiivvd~gs~d~~--------------------------------- 45 (202)
T cd04184 1 PLISIVMPVYNTPEKYLREAIESVRAQTYPNW--ELCIADDASTDPE--------------------------------- 45 (202)
T ss_pred CeEEEEEecccCcHHHHHHHHHHHHhCcCCCe--EEEEEeCCCCChH---------------------------------
Confidence 68999999999883599999999999999888 9999999999872
Q ss_pred hhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhcCCCEEEEEc
Q psy1765 132 MFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLVFLD 211 (867)
Q Consensus 132 ~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A~Gd~llfLD 211 (867)
+...+..+.... +.+++++.+++.|++.|+|.|++.|++|||+|+|
T Consensus 46 --------------------------------~~~~~~~~~~~~--~~~~~~~~~~~~g~~~a~n~g~~~a~~d~i~~ld 91 (202)
T cd04184 46 --------------------------------VKRVLKKYAAQD--PRIKVVFREENGGISAATNSALELATGEFVALLD 91 (202)
T ss_pred --------------------------------HHHHHHHHHhcC--CCEEEEEcccCCCHHHHHHHHHHhhcCCEEEEEC
Confidence 122334444433 6899999999999999999999999999999999
Q ss_pred CCcccCccchHHHHHHHHhcC-CceeeeEEeeecCCCceeccccccccccccccccccccCCcCcCCCCCCCCCcccccc
Q psy1765 212 SHIEVNTHWLEPLLVPIAERT-NTVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPT 290 (867)
Q Consensus 212 aD~~v~p~wLe~Ll~~l~~~~-~~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~ 290 (867)
+|+.++|+||+.+++.+..++ .+++.+.....+....... ......|. . ..+....
T Consensus 92 ~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~----------~~~~~~~~---~----------~~~~~~~ 148 (202)
T cd04184 92 HDDELAPHALYEVVKALNEHPDADLIYSDEDKIDEGGKRSE----------PFFKPDWS---P----------DLLLSQN 148 (202)
T ss_pred CCCcCChHHHHHHHHHHHhCCCCCEEEccHHhccCCCCEec----------cccCCCCC---H----------HHhhhcC
Confidence 999999999999999995444 4555432221111110000 00000000 0 0001113
Q ss_pred cccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEcccEE
Q psy1765 291 MAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRI 342 (867)
Q Consensus 291 ~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V 342 (867)
..+++++++|++|+++||||+.+. ++||+||++|++++|+++.++|...+
T Consensus 149 ~~~~~~~~~r~~~~~iggf~~~~~--~~eD~~l~~rl~~~g~~~~~~~~~~~ 198 (202)
T cd04184 149 YIGHLLVYRRSLVRQVGGFREGFE--GAQDYDLVLRVSEHTDRIAHIPRVLY 198 (202)
T ss_pred CccceEeEEHHHHHHhCCCCcCcc--cchhHHHHHHHHhccceEEEccHhhh
Confidence 345677899999999999999865 48999999999999999999997543
|
The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. |
| >cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-26 Score=243.20 Aligned_cols=210 Identities=16% Similarity=0.182 Sum_probs=147.1
Q ss_pred CcEEEEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHHHh
Q psy1765 52 PSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRAR 131 (867)
Q Consensus 52 P~vSVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~a~ 131 (867)
|+||||||+|||+. .|.+||+||++|+|+....||||||| |+|++
T Consensus 1 p~vSViIp~yNe~~-~l~~~L~sl~~q~~~~~~~eIiVvD~-s~D~t--------------------------------- 45 (232)
T cd06437 1 PMVTVQLPVFNEKY-VVERLIEAACALDYPKDRLEIQVLDD-STDET--------------------------------- 45 (232)
T ss_pred CceEEEEecCCcHH-HHHHHHHHHHhcCCCccceEEEEEEC-CCCcH---------------------------------
Confidence 68999999999876 99999999999999864348999998 88773
Q ss_pred hhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhc--CCCCEEEEEcCCCcCc-hhHHhHhhhhcCCCEEE
Q psy1765 132 MFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGL--NNGRVHLYRTSKREGL-IRARMFGAKYATGKVLV 208 (867)
Q Consensus 132 ~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~--~~~~vrii~~~~n~G~-a~ArN~G~~~A~Gd~ll 208 (867)
.+.+.++.... ..++++++...++.|+ +.|+|.|++.|+||||+
T Consensus 46 ---------------------------------~~~~~~~~~~~~~~~~~i~~~~~~~~~G~k~~a~n~g~~~a~~~~i~ 92 (232)
T cd06437 46 ---------------------------------VRLAREIVEEYAAQGVNIKHVRRADRTGYKAGALAEGMKVAKGEYVA 92 (232)
T ss_pred ---------------------------------HHHHHHHHHHHhhcCCceEEEECCCCCCCchHHHHHHHHhCCCCEEE
Confidence 22233332221 1257888877777885 88999999999999999
Q ss_pred EEcCCcccCccchHHHHHHHHhcCCceeeeEEeeecCC-CceeccccccccccccccccccccCCcCcCCCCCCCCCccc
Q psy1765 209 FLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINAD-TFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPIL 287 (867)
Q Consensus 209 fLDaD~~v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~-~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~ 287 (867)
|+|+|++++|+||+.++..+..+..++|.+.+...+.+ .+... . . .+ ...+.+. . ..... .....
T Consensus 93 ~~DaD~~~~~~~l~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~-~--~--~~--~~~~~~~-~--~~~~~----~~~~~ 158 (232)
T cd06437 93 IFDADFVPPPDFLQKTPPYFADPKLGFVQTRWGHINANYSLLTR-V--Q--AM--SLDYHFT-I--EQVAR----SSTGL 158 (232)
T ss_pred EEcCCCCCChHHHHHhhhhhcCCCeEEEecceeeEcCCCchhhH-h--h--hh--hHHhhhh-H--hHhhH----hhcCC
Confidence 99999999999999977776544446666655433322 11000 0 0 00 0000000 0 00000 00011
Q ss_pred ccccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEcccEEEEEe
Q psy1765 288 SPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGHVF 346 (867)
Q Consensus 288 ~~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V~H~~ 346 (867)
...+.|+++++||++|+++||||+.+. .||+||++|+++.|+++.++|++.|+|..
T Consensus 159 ~~~~~g~~~~~rr~~~~~vgg~~~~~~---~ED~~l~~rl~~~G~~~~~~~~~~v~~~~ 214 (232)
T cd06437 159 FFNFNGTAGVWRKECIEDAGGWNHDTL---TEDLDLSYRAQLKGWKFVYLDDVVVPAEL 214 (232)
T ss_pred eEEeccchhhhhHHHHHHhCCCCCCcc---hhhHHHHHHHHHCCCeEEEeccceeeeeC
Confidence 223457777899999999999998652 79999999999999999999999999865
|
Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we |
| >KOG3736|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.1e-26 Score=261.02 Aligned_cols=367 Identities=30% Similarity=0.440 Sum_probs=214.0
Q ss_pred HHHHHhhcCCCceEEEEeccchhhHHHhhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEE
Q psy1765 104 VETFVKGLNDGRVHLYRTSKREGLIRARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLY 183 (867)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~gi~~a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii 183 (867)
|+.|++.+.- ++++++++|+|+++||+.|++.|+||++. +++-..-|..|.-.|. .+.+.+-.....-|-|-+|
T Consensus 193 Ld~y~k~~~~--v~i~r~~~R~GLIrARl~GA~~A~geVL~--FLDsHcE~n~gWLePL--L~~I~~~r~tvv~PvID~I 266 (578)
T KOG3736|consen 193 LEEYVKRFSK--VRILRTKKREGLIRARLLGASMATGEVLT--FLDSHCEVNVGWLEPL--LARIAEDRKTVVCPVIDVI 266 (578)
T ss_pred hHHHHhhhcc--eeEEeecchhhhHHHHhhhhhhhhchhee--eeecceeEecCcchHH--HHHhhhcCceeecceEEee
Confidence 4556664444 89999999999999999999999999986 7777777887776542 2222211111112344455
Q ss_pred EcCCCcCchhHHhHhhhhcCCCEEEEEcCCc-ccCccchHHHHHHHHhcCC--ceeeeEEeeecCCCce----ecccccc
Q psy1765 184 RTSKREGLIRARMFGAKYATGKVLVFLDSHI-EVNTHWLEPLLVPIAERTN--TVTVPIIDIINADTFQ----YTSSALV 256 (867)
Q Consensus 184 ~~~~n~G~a~ArN~G~~~A~Gd~llfLDaD~-~v~p~wLe~Ll~~l~~~~~--~vv~p~i~~i~~~~~~----~~~~~~~ 256 (867)
... ++.+... ...+.|-|-.=|+-.. .++..+..+.-.. .+|. -...+.+..|+..-|. |..+...
T Consensus 267 d~~-tf~y~~~----~~~~rGgFdW~l~f~w~~lP~~~~~~~~~~--t~PirsPtMaGglFAI~r~yF~eiG~yD~gMdi 339 (578)
T KOG3736|consen 267 DDN-TFEYEKQ----SELMRGGFDWELTFKWERLPLPEEKRRELP--TDPIRSPTMAGGLFAIDRKYFGELGSYDEGMDI 339 (578)
T ss_pred cCc-Cceeccc----CccceeeeecceeEEeccCCccHhhcccCC--CCCcCCcccCCceEEeeHHHHhhccCccccccc
Confidence 444 4444332 2334444333232221 1233333221100 1111 1112223344444333 3344566
Q ss_pred ccccccccccccccCCcCcCCCCCCCCCcccccccccceEeE-eHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEE
Q psy1765 257 RGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMAGGLFAI-DRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLA 335 (867)
Q Consensus 257 ~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~ai-rR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~ 335 (867)
+||-+..+.|+- +++||-+-+ .=+ +||- .+| .
T Consensus 340 wGGENlElSfrv---------------------WqCGG~lei~PCS---rVGH---------------ifR--------k 372 (578)
T KOG3736|consen 340 WGGENLELSFRV---------------------WQCGGRLEIVPCS---RVGH---------------IFR--------K 372 (578)
T ss_pred cChhhceeeEEE---------------------eccCCeEEecCcc---ceee---------------eee--------c
Confidence 677666666651 233332211 000 0010 000 0
Q ss_pred EEcccEEEEEeccCCCCCCCCCCchhhhhhHHHHHhcHHHHHHHHhhcCCCcCCCCCCCchhHHHHHHHcCCcccccccc
Q psy1765 336 MIPCSRIGHVFRSRRPYNNGHNEDPLTRNSLRVAHVWMDEYIEHFLKQRPEARNIDYGDVTDRKQLRARLGCKSFKWYLD 415 (867)
Q Consensus 336 ~~P~s~V~H~~r~~~~y~~~~~~~~~~rN~~R~a~~w~d~~~~~~y~~~p~~~~~~~gdi~~r~~lr~~l~ck~F~Wyl~ 415 (867)
..| |-+....-+. .+|.+|+|++||||||++||++.|.++.+++||+|+|++||++|+||+|+|||+
T Consensus 373 ~~p-----Y~~p~~~~~~--------~~N~~RlAeVWmDeyK~~~y~~~P~~~~~d~GDvseR~~LR~~L~CKsFkWyL~ 439 (578)
T KOG3736|consen 373 RKP-----YTFPDGTDTA--------TRNLKRLAEVWMDEYKEQFYKRMPGLRNIDEGDLTERKALRERLNCKSFKWYLE 439 (578)
T ss_pred CCC-----ccCCCcchhh--------hhchhhhhhhhhHHHHHHHHhhCccccccCCCCchhHHHHHHhcCCccccchHh
Confidence 001 0010000011 379999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCcCCCchHHHHhhhhccccCCCCCCCccccccccCceeEEEeecchhhhhhhccCcccCCCCccCCchhHhhhhh
Q psy1765 416 NVYPEMILPSDDEERLKKKWAQVEQPKFQPWYSRARNYTNSLRVAHVWMDEYIEHFLKQRPEARNIDYGDVTDRKQLRAR 495 (867)
Q Consensus 416 ~v~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~s~~~~~~N~~R~aeVWmDeyk~~~y~~~p~~~~~~~gdis~r~~LR~~ 495 (867)
|||||+.+|...... .|+ +.... .| .++|-.- ++++
T Consensus 440 nVyPel~~~~~~~~~-~G~---i~~~~-----------~~------~cld~~~-----------------------~~~~ 475 (578)
T KOG3736|consen 440 NVYPELYLPTPHVYA-SGE---IRNGN-----------PN------LCLDTER-----------------------APAG 475 (578)
T ss_pred hcCccccCCCCcccc-cce---eccCC-----------cc------hhhhhhc-----------------------hhcc
Confidence 999999998876522 111 11100 00 1111110 0000
Q ss_pred ccccccccccccccCccccCCCcHHHHhhhhhcccCCCcccccccccccccceeeeecCCCceecccCCCCCCCcEEEEe
Q psy1765 496 LGCKSFKWYLDNVYPEMILPSDDEERLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSSTDLCLTSKVDKTKGSPLVLKK 575 (867)
Q Consensus 496 l~CksF~Wyl~nv~p~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~rn~~~~g~ir~~~~~~CLD~~~~~~~g~~v~l~~ 575 (867)
-+| .+ ...||+..+ .+|.|. ++..++||... .|+|.. ..|. |.|.+
T Consensus 476 ~~~----------~~-~~~~Ch~~~-~~Q~~~----------------yT~~~eir~~~--~cl~~~---~~~~-v~l~~ 521 (578)
T KOG3736|consen 476 QGM----------AV-GLYPCHGPG-GNQYFP----------------YTKQGEIRIGD--LCLDVD---DAGK-VTLYD 521 (578)
T ss_pred CCC----------cc-eEecCCCcc-cccccc----------------ccCCcceEECC--EEeccc---cCCc-eEEEe
Confidence 011 11 123555431 123333 56778888655 999975 2344 99999
Q ss_pred cCCCCCCceeeecCCCceEE-eeceeeecCCC--ccEEEeCCCCCCCcce
Q psy1765 576 CDELSKTQHWSKTDKSELVL-AELLCLDAGAT--KPKLTKCHEMGGSQEY 622 (867)
Q Consensus 576 C~~~~~~Q~w~~t~~~~i~~-~~~~CLd~~g~--~v~l~~C~~~~~~Q~~ 622 (867)
||+.+ ||.|.|..+|.|.+ .+++||++... .+.+..|......|+|
T Consensus 522 C~~~~-~q~w~~~~~~~i~~~~sg~CL~~~~~~~~~~l~~c~~~~~~Q~W 570 (578)
T KOG3736|consen 522 CHKMG-NQLWHYDKDGTLYHRNSGKCLEAAVDKNGLILVACDPSDPTQQW 570 (578)
T ss_pred ccccc-ccceEEcCCCceEcCCCCccccccCCCCCceEeecCCCCCcceE
Confidence 99877 99999999988875 56899998743 3889999998888885
|
|
| >cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.3e-26 Score=239.26 Aligned_cols=204 Identities=17% Similarity=0.228 Sum_probs=147.3
Q ss_pred EEEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHHHhhhh
Q psy1765 55 SVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRARMFG 134 (867)
Q Consensus 55 SVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~a~~~g 134 (867)
|||||+|||+...|.+||+||++|+|+++ |||||||+|+|++
T Consensus 1 siiip~~ne~~~~l~~~l~sl~~q~~~~~--eiiVvdd~s~D~t------------------------------------ 42 (236)
T cd06435 1 SIHVPCYEEPPEMVKETLDSLAALDYPNF--EVIVIDNNTKDEA------------------------------------ 42 (236)
T ss_pred CeeEeeCCCcHHHHHHHHHHHHhCCCCCc--EEEEEeCCCCchh------------------------------------
Confidence 79999999886699999999999999988 9999999999983
Q ss_pred hhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCc-hhHHhHhhhhcC--CCEEEEEc
Q psy1765 135 AKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGL-IRARMFGAKYAT--GKVLVFLD 211 (867)
Q Consensus 135 ~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~-a~ArN~G~~~A~--Gd~llfLD 211 (867)
+.+.+.++.++. +.++++++..++.|. ++|+|.|++.|. +|||+|+|
T Consensus 43 -----------------------------~~~~i~~~~~~~-~~~i~~i~~~~~~G~~~~a~n~g~~~a~~~~d~i~~lD 92 (236)
T cd06435 43 -----------------------------LWKPVEAHCAQL-GERFRFFHVEPLPGAKAGALNYALERTAPDAEIIAVID 92 (236)
T ss_pred -----------------------------HHHHHHHHHHHh-CCcEEEEEcCCCCCCchHHHHHHHHhcCCCCCEEEEEc
Confidence 123444554443 357888988888886 899999999986 79999999
Q ss_pred CCcccCccchHHHHHHHHhcCCceeeeEEeeecCCCceecccccccc-ccccccccccccCCcCcCCCCCCCCCcccccc
Q psy1765 212 SHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRG-GFNWGLHFKWENLPKGTLNSSEDFIKPILSPT 290 (867)
Q Consensus 212 aD~~v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~~~~~~~~~~~~g-~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~ 290 (867)
+|+.++|+||+.++..+.+...++|++.....+.... ..... .+.+...+.. ..+ . ........
T Consensus 93 ~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-~~~----~-----~~~~~~~~ 157 (236)
T cd06435 93 ADYQVEPDWLKRLVPIFDDPRVGFVQAPQDYRDGEES-----LFKRMCYAEYKGFFDI-GMV----S-----RNERNAII 157 (236)
T ss_pred CCCCcCHHHHHHHHHHhcCCCeeEEecCccccCCCcc-----HHHHHHhHHHHHHHHH-Hhc----c-----ccccCceE
Confidence 9999999999999999975444555443222111100 00000 0000000000 000 0 00112335
Q ss_pred cccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEcccEEEE
Q psy1765 291 MAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGH 344 (867)
Q Consensus 291 ~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V~H 344 (867)
..|+++++||++|+++||||+.+. +||+||++|+++.|+++.++|.+.++|
T Consensus 158 ~~g~~~~~rr~~~~~iGgf~~~~~---~eD~dl~~r~~~~G~~~~~~~~~~~~~ 208 (236)
T cd06435 158 QHGTMCLIRRSALDDVGGWDEWCI---TEDSELGLRMHEAGYIGVYVAQSYGHG 208 (236)
T ss_pred EecceEEEEHHHHHHhCCCCCccc---cchHHHHHHHHHCCcEEEEcchhhccC
Confidence 578889999999999999999752 799999999999999999999987654
|
NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response. |
| >cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase | Back alignment and domain information |
|---|
Probab=99.93 E-value=4e-25 Score=223.09 Aligned_cols=181 Identities=18% Similarity=0.247 Sum_probs=138.4
Q ss_pred EEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHHHhhhhh
Q psy1765 56 VIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRARMFGA 135 (867)
Q Consensus 56 VIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~a~~~g~ 135 (867)
||||+||++. .|.+||+||++|+++++ |||||||+|+|.+
T Consensus 1 ivip~~n~~~-~l~~~l~sl~~q~~~~~--eiivvdd~s~d~t------------------------------------- 40 (182)
T cd06420 1 LIITTYNRPE-ALELVLKSVLNQSILPF--EVIIADDGSTEET------------------------------------- 40 (182)
T ss_pred CEEeecCChH-HHHHHHHHHHhccCCCC--EEEEEeCCCchhH-------------------------------------
Confidence 7999999775 99999999999998888 9999999998872
Q ss_pred hhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhcCCCEEEEEcCCcc
Q psy1765 136 KYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLVFLDSHIE 215 (867)
Q Consensus 136 ~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A~Gd~llfLDaD~~ 215 (867)
.+.+.++.+......+.+++.+.+.|.++++|.|++.|+||||+|||+|++
T Consensus 41 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~g~~~a~g~~i~~lD~D~~ 91 (182)
T cd06420 41 -----------------------------KELIEEFKSQFPIPIKHVWQEDEGFRKAKIRNKAIAAAKGDYLIFIDGDCI 91 (182)
T ss_pred -----------------------------HHHHHHHHhhcCCceEEEEcCCcchhHHHHHHHHHHHhcCCEEEEEcCCcc
Confidence 233444433221123445555556788999999999999999999999999
Q ss_pred cCccchHHHHHHHHhcCCceeeeEEeeecCCCceeccccccccccccccccccccCCcCcCCCCCCCCCcccccccccce
Q psy1765 216 VNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMAGGL 295 (867)
Q Consensus 216 v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~ 295 (867)
++++||+.+++.+ .....++++.+. ++... ......|++
T Consensus 92 ~~~~~l~~~~~~~-~~~~~v~g~~~~-~~~~~---------------------------------------~~~~~~~~~ 130 (182)
T cd06420 92 PHPDFIADHIELA-EPGVFLSGSRVL-LNEKL---------------------------------------TERGIRGCN 130 (182)
T ss_pred cCHHHHHHHHHHh-CCCcEEecceee-ccccc---------------------------------------ceeEeccce
Confidence 9999999999988 222233332221 10000 002455778
Q ss_pred EeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeE-EEEcccEEEEEe
Q psy1765 296 FAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSL-AMIPCSRIGHVF 346 (867)
Q Consensus 296 ~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i-~~~P~s~V~H~~ 346 (867)
++++|+.|.++||||+.+..||+||+||++|++++|+.+ .+.|.+.++|++
T Consensus 131 ~~~~r~~~~~~ggf~~~~~~~~~eD~~l~~r~~~~g~~~~~~~~~~~~~h~~ 182 (182)
T cd06420 131 MSFWKKDLLAVNGFDEEFTGWGGEDSELVARLLNSGIKFRKLKFAAIVFHLW 182 (182)
T ss_pred EEEEHHHHHHhCCCCcccccCCcchHHHHHHHHHcCCcEEEecccceeeecC
Confidence 899999999999999999999999999999999999554 455688999974
|
Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm |
| >cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-25 Score=230.31 Aligned_cols=198 Identities=18% Similarity=0.137 Sum_probs=147.4
Q ss_pred EEEEEeCCCCh-HHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHHHhhh
Q psy1765 55 SVIICFYNEHP-ATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRARMF 133 (867)
Q Consensus 55 SVIIp~yNe~~-~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~a~~~ 133 (867)
|||||+||++. ..|.+||+||++|+++.+ |||||||+|+++
T Consensus 1 sviip~~n~~~~~~l~~~l~Sl~~q~~~~~--eiiivdd~ss~d------------------------------------ 42 (201)
T cd04195 1 SVLMSVYIKEKPEFLREALESILKQTLPPD--EVVLVKDGPVTQ------------------------------------ 42 (201)
T ss_pred CEEEEccccchHHHHHHHHHHHHhcCCCCc--EEEEEECCCCch------------------------------------
Confidence 79999999763 599999999999999877 999999999666
Q ss_pred hhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhcCCCEEEEEcCC
Q psy1765 134 GAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLVFLDSH 213 (867)
Q Consensus 134 g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A~Gd~llfLDaD 213 (867)
.+.+.+..+.++. .+++++.++|.|++.|+|.|++.|+||||+|+|+|
T Consensus 43 -----------------------------~t~~~~~~~~~~~---~i~~i~~~~n~G~~~a~N~g~~~a~gd~i~~lD~D 90 (201)
T cd04195 43 -----------------------------SLNEVLEEFKRKL---PLKVVPLEKNRGLGKALNEGLKHCTYDWVARMDTD 90 (201)
T ss_pred -----------------------------hHHHHHHHHHhcC---CeEEEEcCccccHHHHHHHHHHhcCCCEEEEeCCc
Confidence 2344555665544 49999999999999999999999999999999999
Q ss_pred cccCccchHHHHHHHHhcCC-ceeeeEEeeecCCCceeccccccccccccccccccccCCcCcCCCCCCCCCcccccccc
Q psy1765 214 IEVNTHWLEPLLVPIAERTN-TVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMA 292 (867)
Q Consensus 214 ~~v~p~wLe~Ll~~l~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 292 (867)
++++|++|+.+++.+.+++. .++++....++.+........... ....+. .... ....+.
T Consensus 91 d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~-----~~~~--------~~~~~~ 151 (201)
T cd04195 91 DISLPDRFEKQLDFIEKNPEIDIVGGGVLEFDSDGNDIGKRRLPT------SHDDIL-----KFAR--------RRSPFN 151 (201)
T ss_pred cccCcHHHHHHHHHHHhCCCeEEEcccEEEECCCCCeeccccCCC------CHHHHH-----HHhc--------cCCCCC
Confidence 99999999999999987654 566655544433322111000000 000000 0000 011233
Q ss_pred cceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEcccEEEE
Q psy1765 293 GGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGH 344 (867)
Q Consensus 293 G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V~H 344 (867)
++++++||++|+++|+||+. .++||.+|++|+..+|+++.++|...+.|
T Consensus 152 ~~~~~~rr~~~~~~g~~~~~---~~~eD~~~~~r~~~~g~~~~~~~~~~~~y 200 (201)
T cd04195 152 HPTVMFRKSKVLAVGGYQDL---PLVEDYALWARMLANGARFANLPEILVKA 200 (201)
T ss_pred ChHHhhhHHHHHHcCCcCCC---CCchHHHHHHHHHHcCCceecccHHHhhc
Confidence 45678999999999999986 24899999999999999999999877654
|
AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. |
| >cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.8e-25 Score=234.80 Aligned_cols=205 Identities=15% Similarity=0.154 Sum_probs=148.4
Q ss_pred CcEEEEEEeCCCChHHHHHHHHHHHhcCccc--cccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHH
Q psy1765 52 PSTSVIICFYNEHPATLYRSVQTLLSRTGQS--LLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIR 129 (867)
Q Consensus 52 P~vSVIIp~yNe~~~~l~~~l~Svl~qt~~~--~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~ 129 (867)
|+||||||+||++...|.+||+||+.|+++. + |||||||+|+|++
T Consensus 1 p~vsviip~~n~~~~~l~~~l~sl~~q~~~~~~~--eiivvdd~s~d~t------------------------------- 47 (234)
T cd06421 1 PTVDVFIPTYNEPLEIVRKTLRAALAIDYPHDKL--RVYVLDDGRRPEL------------------------------- 47 (234)
T ss_pred CceEEEEecCCCcHHHHHHHHHHHHhcCCCcccE--EEEEEcCCCchhH-------------------------------
Confidence 7899999999987668999999999999998 6 9999999998872
Q ss_pred HhhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCc-hhHHhHhhhhcCCCEEE
Q psy1765 130 ARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGL-IRARMFGAKYATGKVLV 208 (867)
Q Consensus 130 a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~-a~ArN~G~~~A~Gd~ll 208 (867)
.+.+..+.... .++++..+.|.|. ++++|.|++.|+||||+
T Consensus 48 -----------------------------------~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~n~~~~~a~~d~i~ 89 (234)
T cd06421 48 -----------------------------------RALAAELGVEY---GYRYLTRPDNRHAKAGNLNNALAHTTGDFVA 89 (234)
T ss_pred -----------------------------------HHHHHHhhccc---CceEEEeCCCCCCcHHHHHHHHHhCCCCEEE
Confidence 23334433222 5667776666664 67789999999999999
Q ss_pred EEcCCcccCccchHHHHHHHHhcC-CceeeeEEeeecCCCceecccccccccccc--ccccccccCCcCcCCCCCCCCCc
Q psy1765 209 FLDSHIEVNTHWLEPLLVPIAERT-NTVTVPIIDIINADTFQYTSSALVRGGFNW--GLHFKWENLPKGTLNSSEDFIKP 285 (867)
Q Consensus 209 fLDaD~~v~p~wLe~Ll~~l~~~~-~~vv~p~i~~i~~~~~~~~~~~~~~g~f~~--~l~~~~~~~~~~~~~~~~~~~~p 285 (867)
|+|+|+.++|+||+.+++.+.+++ .++|++.....+.+.... ....+.. ...+... ... ...
T Consensus 90 ~lD~D~~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~--~~~--------~~~ 154 (234)
T cd06421 90 ILDADHVPTPDFLRRTLGYFLDDPKVALVQTPQFFYNPDPFDW-----LADGAPNEQELFYGVI--QPG--------RDR 154 (234)
T ss_pred EEccccCcCccHHHHHHHHHhcCCCeEEEecceEEecCCcchh-----HHHHHHHHHHHHHHHH--HHH--------Hhh
Confidence 999999999999999999998744 455555433222221100 0000000 0000000 000 000
Q ss_pred ccccccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEcccEEEEE
Q psy1765 286 ILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGHV 345 (867)
Q Consensus 286 ~~~~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V~H~ 345 (867)
.......|+++++||++|+++||||+.+. +||+++++|++++|+++.++|.+.++|.
T Consensus 155 ~~~~~~~g~~~~~r~~~~~~ig~~~~~~~---~eD~~l~~r~~~~g~~i~~~~~~~~~~~ 211 (234)
T cd06421 155 WGAAFCCGSGAVVRREALDEIGGFPTDSV---TEDLATSLRLHAKGWRSVYVPEPLAAGL 211 (234)
T ss_pred cCCceecCceeeEeHHHHHHhCCCCccce---eccHHHHHHHHHcCceEEEecCcccccc
Confidence 12456678999999999999999997653 7999999999999999999999988874
|
Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end. |
| >PRK11204 N-glycosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.4e-25 Score=254.45 Aligned_cols=233 Identities=17% Similarity=0.191 Sum_probs=167.0
Q ss_pred CCCCcEEEEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhH
Q psy1765 49 STLPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLI 128 (867)
Q Consensus 49 ~~~P~vSVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 128 (867)
...|+||||||+|||+. .|.+||+|+++|+|+++ |||||||+|+|++
T Consensus 51 ~~~p~vsViIp~yne~~-~i~~~l~sl~~q~yp~~--eiiVvdD~s~d~t------------------------------ 97 (420)
T PRK11204 51 KEYPGVSILVPCYNEGE-NVEETISHLLALRYPNY--EVIAINDGSSDNT------------------------------ 97 (420)
T ss_pred CCCCCEEEEEecCCCHH-HHHHHHHHHHhCCCCCe--EEEEEECCCCccH------------------------------
Confidence 35689999999999875 99999999999999987 9999999999883
Q ss_pred HHhhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhcCCCEEE
Q psy1765 129 RARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLV 208 (867)
Q Consensus 129 ~a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A~Gd~ll 208 (867)
.+.++++.++. +++++++.++|.|++.|+|.|++.|+|||++
T Consensus 98 ------------------------------------~~~l~~~~~~~--~~v~~i~~~~n~Gka~aln~g~~~a~~d~i~ 139 (420)
T PRK11204 98 ------------------------------------GEILDRLAAQI--PRLRVIHLAENQGKANALNTGAAAARSEYLV 139 (420)
T ss_pred ------------------------------------HHHHHHHHHhC--CcEEEEEcCCCCCHHHHHHHHHHHcCCCEEE
Confidence 23445554444 6899999888999999999999999999999
Q ss_pred EEcCCcccCccchHHHHHHHHhcCC-ceeeeEEeeecCCCceeccccccccccccccccccccCCcCcCCCCCCCCCccc
Q psy1765 209 FLDSHIEVNTHWLEPLLVPIAERTN-TVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPIL 287 (867)
Q Consensus 209 fLDaD~~v~p~wLe~Ll~~l~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~ 287 (867)
++|+|+.++|++|+.+++.+.+++. ++|++.....+..+..- ....+.+....... .. ... ..-.
T Consensus 140 ~lDaD~~~~~d~L~~l~~~~~~~~~v~~v~g~~~~~~~~~~~~---~~~~~~~~~~~~~~-----~~----~~~--~~~~ 205 (420)
T PRK11204 140 CIDGDALLDPDAAAYMVEHFLHNPRVGAVTGNPRIRNRSTLLG---RIQVGEFSSIIGLI-----KR----AQR--VYGR 205 (420)
T ss_pred EECCCCCCChhHHHHHHHHHHhCCCeEEEECCceeccchhHHH---HHHHHHHHHhhhHH-----HH----HHH--HhCC
Confidence 9999999999999999999987765 44443222212111000 00000010000000 00 000 0012
Q ss_pred ccccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEcccEEEEEeccCCCCCCCCCCchhhhhhHH
Q psy1765 288 SPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGHVFRSRRPYNNGHNEDPLTRNSLR 367 (867)
Q Consensus 288 ~~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V~H~~r~~~~y~~~~~~~~~~rN~~R 367 (867)
...++|+++++||++++++||||+++. .||+|+++|+.++|+++.++|++.++|.. |.....+.+...|
T Consensus 206 ~~~~~G~~~~~rr~~l~~vgg~~~~~~---~ED~~l~~rl~~~G~~i~~~p~~~~~~~~--------p~t~~~~~~Qr~R 274 (420)
T PRK11204 206 VFTVSGVITAFRKSALHEVGYWSTDMI---TEDIDISWKLQLRGWDIRYEPRALCWILM--------PETLKGLWKQRLR 274 (420)
T ss_pred ceEecceeeeeeHHHHHHhCCCCCCcc---cchHHHHHHHHHcCCeEEeccccEEEeEC--------cccHHHHHHHHHH
Confidence 335678999999999999999999864 79999999999999999999999998854 2233344555555
Q ss_pred HHHhcHHHHH
Q psy1765 368 VAHVWMDEYI 377 (867)
Q Consensus 368 ~a~~w~d~~~ 377 (867)
.+.-.+....
T Consensus 275 W~~G~~~~l~ 284 (420)
T PRK11204 275 WAQGGAEVLL 284 (420)
T ss_pred HhcCHHHHHH
Confidence 5555444443
|
|
| >TIGR03469 HonB hopene-associated glycosyltransferase HpnB | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-25 Score=253.19 Aligned_cols=213 Identities=18% Similarity=0.187 Sum_probs=150.7
Q ss_pred CCCCcEEEEEEeCCCChHHHHHHHHHHHhcCcc-ccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhh
Q psy1765 49 STLPSTSVIICFYNEHPATLYRSVQTLLSRTGQ-SLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGL 127 (867)
Q Consensus 49 ~~~P~vSVIIp~yNe~~~~l~~~l~Svl~qt~~-~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi 127 (867)
...|+||||||+|||+. .|.+||+||++|+|+ ++ |||||||+|+|++
T Consensus 37 ~~~p~VSVIIpa~Ne~~-~L~~~L~sL~~q~yp~~~--eIIVVDd~StD~T----------------------------- 84 (384)
T TIGR03469 37 EAWPAVVAVVPARNEAD-VIGECVTSLLEQDYPGKL--HVILVDDHSTDGT----------------------------- 84 (384)
T ss_pred CCCCCEEEEEecCCcHh-HHHHHHHHHHhCCCCCce--EEEEEeCCCCCcH-----------------------------
Confidence 46799999999999875 999999999999998 56 9999999999983
Q ss_pred HHHhhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcC-CCCEEEEEcCC----CcCchhHHhHhhhhc
Q psy1765 128 IRARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLN-NGRVHLYRTSK----REGLIRARMFGAKYA 202 (867)
Q Consensus 128 ~~a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~-~~~vrii~~~~----n~G~a~ArN~G~~~A 202 (867)
.+.+.++.++.+ .+++++++.+. ..|.+.|+|.|+++|
T Consensus 85 -------------------------------------~~i~~~~~~~~~~~~~i~vi~~~~~~~g~~Gk~~A~n~g~~~A 127 (384)
T TIGR03469 85 -------------------------------------ADIARAAARAYGRGDRLTVVSGQPLPPGWSGKLWAVSQGIAAA 127 (384)
T ss_pred -------------------------------------HHHHHHHHHhcCCCCcEEEecCCCCCCCCcchHHHHHHHHHHH
Confidence 334455544441 13788887532 357888999999999
Q ss_pred C-----CCEEEEEcCCcccCccchHHHHHHHHhcCCceeeeEEeeecCCCceeccccccccccccccccccccCCcCcCC
Q psy1765 203 T-----GKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLN 277 (867)
Q Consensus 203 ~-----Gd~llfLDaD~~v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~ 277 (867)
+ ||+|+|+|+|+.++|+||+.+++.+.+++.+++++.........++....+.....+.....+.|..
T Consensus 128 ~~~~~~gd~llflDaD~~~~p~~l~~lv~~~~~~~~~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 200 (384)
T TIGR03469 128 RTLAPPADYLLLTDADIAHGPDNLARLVARARAEGLDLVSLMVRLRCESFWEKLLIPAFVFFFQKLYPFRWVN------- 200 (384)
T ss_pred hccCCCCCEEEEECCCCCCChhHHHHHHHHHHhCCCCEEEecccccCCCHHHHHHHHHHHHHHHHhcchhhhc-------
Confidence 9 9999999999999999999999999887766665433221111110000000000000000011110
Q ss_pred CCCCCCCcccccccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEcccEEE
Q psy1765 278 SSEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIG 343 (867)
Q Consensus 278 ~~~~~~~p~~~~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V~ 343 (867)
... ..+....|+|+++||++|+++||||+..... .||++|+.|+.++|+++.+.+.....
T Consensus 201 ---~~~--~~~~~~~G~~~lirr~~~~~vGGf~~~~~~~-~ED~~L~~r~~~~G~~v~~~~~~~~~ 260 (384)
T TIGR03469 201 ---DPR--RRTAAAAGGCILIRREALERIGGIAAIRGAL-IDDCTLAAAVKRSGGRIWLGLAARTR 260 (384)
T ss_pred ---CCC--ccceeecceEEEEEHHHHHHcCCHHHHhhCc-ccHHHHHHHHHHcCCcEEEEecCceE
Confidence 000 1234567999999999999999999865554 79999999999999999987655443
|
This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms. |
| >cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.1e-25 Score=236.61 Aligned_cols=207 Identities=15% Similarity=0.176 Sum_probs=142.1
Q ss_pred CcEEEEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHHHh
Q psy1765 52 PSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRAR 131 (867)
Q Consensus 52 P~vSVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~a~ 131 (867)
|+||||||+|||+. .|.++|+||++|+|+....|||||||+|+|++
T Consensus 1 p~vsIiIp~~Ne~~-~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t--------------------------------- 46 (241)
T cd06427 1 PVYTILVPLYKEAE-VLPQLIASLSALDYPRSKLDVKLLLEEDDEET--------------------------------- 46 (241)
T ss_pred CeEEEEEecCCcHH-HHHHHHHHHHhCcCCcccEEEEEEECCCCchH---------------------------------
Confidence 78999999999875 99999999999999863339999999998873
Q ss_pred hhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhcCCCEEEEEc
Q psy1765 132 MFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLVFLD 211 (867)
Q Consensus 132 ~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A~Gd~llfLD 211 (867)
.+.+.++.... ..+++++.+.++.|.++|+|.|++.|+||||+|+|
T Consensus 47 ---------------------------------~~i~~~~~~~~-~~~i~~~~~~~~~G~~~a~n~g~~~a~gd~i~~~D 92 (241)
T cd06427 47 ---------------------------------IAAARALRLPS-IFRVVVVPPSQPRTKPKACNYALAFARGEYVVIYD 92 (241)
T ss_pred ---------------------------------HHHHHHhccCC-CeeEEEecCCCCCchHHHHHHHHHhcCCCEEEEEc
Confidence 22333332111 13566677777899999999999999999999999
Q ss_pred CCcccCccchHHHHHHHHhc-CC-ceeeeEEeeecCCCceeccccccccccccccccccccCCcCcCCCCCCCCCccccc
Q psy1765 212 SHIEVNTHWLEPLLVPIAER-TN-TVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSP 289 (867)
Q Consensus 212 aD~~v~p~wLe~Ll~~l~~~-~~-~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~~ 289 (867)
+|+.++|+||+++++.+.++ +. +++++.+...+........ .....+ ...+... .+.. .. . . ...
T Consensus 93 aD~~~~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~-~~~~--~~---~-~--~~~ 159 (241)
T cd06427 93 AEDAPDPDQLKKAVAAFARLDDKLACVQAPLNYYNARENWLTR--MFALEY--AAWFDYL-LPGL--AR---L-G--LPI 159 (241)
T ss_pred CCCCCChHHHHHHHHHHHhcCCCEEEEeCceEeeCCCccHHHH--HHHHHH--HHHHHHH-HHHH--Hh---c-C--Cee
Confidence 99999999999999999865 33 3344433222211000000 000000 0000000 0000 00 0 0 112
Q ss_pred ccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEcccEE
Q psy1765 290 TMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRI 342 (867)
Q Consensus 290 ~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V 342 (867)
.+.|+++++||++|+++||||+.. + +||+||++|+++.|+++.++|...+
T Consensus 160 ~~~g~~~~~rr~~~~~vgg~~~~~--~-~eD~~l~~rl~~~G~r~~~~~~~~~ 209 (241)
T cd06427 160 PLGGTSNHFRTDVLRELGGWDPFN--V-TEDADLGLRLARAGYRTGVLNSTTL 209 (241)
T ss_pred ecCCchHHhhHHHHHHcCCCCccc--c-hhhHHHHHHHHHCCceEEEeccccc
Confidence 346778899999999999999842 3 7999999999999999999986543
|
The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot |
| >PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.8e-25 Score=231.13 Aligned_cols=208 Identities=24% Similarity=0.335 Sum_probs=128.7
Q ss_pred CcEEEEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHHHh
Q psy1765 52 PSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRAR 131 (867)
Q Consensus 52 P~vSVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~a~ 131 (867)
|.||||||+||+.. .|.++|.|+++|+++.+ |||||||+|++++
T Consensus 1 P~v~Vvip~~~~~~-~l~~~l~sl~~~~~~~~--~v~vvd~~~~~~~--------------------------------- 44 (228)
T PF13641_consen 1 PRVSVVIPAYNEDD-VLRRCLESLLAQDYPRL--EVVVVDDGSDDET--------------------------------- 44 (228)
T ss_dssp --EEEE--BSS-HH-HHHHHHHHHTTSHHHTE--EEEEEEE-SSS-G---------------------------------
T ss_pred CEEEEEEEecCCHH-HHHHHHHHHHcCCCCCe--EEEEEECCCChHH---------------------------------
Confidence 78999999999766 99999999999999887 9999999998872
Q ss_pred hhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcC---chhHHhHhhhhcCCCEEE
Q psy1765 132 MFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREG---LIRARMFGAKYATGKVLV 208 (867)
Q Consensus 132 ~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G---~a~ArN~G~~~A~Gd~ll 208 (867)
.+.+.++.+.+...+++++..+.+.| .+.|+|.|++.+++|+|+
T Consensus 45 ---------------------------------~~~~~~~~~~~~~~~v~vi~~~~~~g~~~k~~a~n~~~~~~~~d~i~ 91 (228)
T PF13641_consen 45 ---------------------------------AEILRALAARYPRVRVRVIRRPRNPGPGGKARALNEALAAARGDYIL 91 (228)
T ss_dssp ---------------------------------CTTHHHHHHTTGG-GEEEEE----HHHHHHHHHHHHHHHH---SEEE
T ss_pred ---------------------------------HHHHHHHHHHcCCCceEEeecCCCCCcchHHHHHHHHHHhcCCCEEE
Confidence 12344555554223679998876665 788999999999999999
Q ss_pred EEcCCcccCccchHHHHHHHHhcCCceeeeEEeeecCCCceeccccccccccccccccccccCCcCcCCCCCCCCCcccc
Q psy1765 209 FLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILS 288 (867)
Q Consensus 209 fLDaD~~v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~ 288 (867)
|+|+|+.++|+||+.+++.+.....++|++.+...+.... ... ...+... .+. . ...........
T Consensus 92 ~lD~D~~~~p~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~------~~~~~~~-~~~-~------~~~~~~~~~~~ 156 (228)
T PF13641_consen 92 FLDDDTVLDPDWLERLLAAFADPGVGAVGGPVFPDNDRNW-LTR------LQDLFFA-RWH-L------RFRSGRRALGV 156 (228)
T ss_dssp EE-SSEEE-CHHHHHHHHHHHBSS--EEEEEEEETTCCCE-EEE-------TT--S--EET-T------TS-TT-B----
T ss_pred EECCCcEECHHHHHHHHHHHHhCCCCeEeeeEeecCCCCH-HHH------HHHHHHh-hhh-h------hhhhhhcccce
Confidence 9999999999999999999955555677665533222211 000 0000000 000 0 00001122234
Q ss_pred cccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEcccEEEEEe
Q psy1765 289 PTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGHVF 346 (867)
Q Consensus 289 ~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V~H~~ 346 (867)
..+.|+++++||++|+++||||+ +.. +||.||++|+++.|+++.+.|.+.|.|..
T Consensus 157 ~~~~G~~~~~rr~~~~~~g~fd~--~~~-~eD~~l~~r~~~~G~~~~~~~~~~v~~~~ 211 (228)
T PF13641_consen 157 AFLSGSGMLFRRSALEEVGGFDP--FIL-GEDFDLCLRLRAAGWRIVYAPDALVYHEE 211 (228)
T ss_dssp S-B--TEEEEEHHHHHHH-S--S--SSS-SHHHHHHHHHHHTT--EEEEEEEEEEE--
T ss_pred eeccCcEEEEEHHHHHHhCCCCC--CCc-ccHHHHHHHHHHCCCcEEEECCcEEEEeC
Confidence 56789999999999999999999 333 69999999999999999999999999975
|
|
| >PRK14583 hmsR N-glycosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=9e-25 Score=252.24 Aligned_cols=233 Identities=17% Similarity=0.194 Sum_probs=169.2
Q ss_pred CCCcEEEEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHH
Q psy1765 50 TLPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIR 129 (867)
Q Consensus 50 ~~P~vSVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~ 129 (867)
..|.||||||+|||+. .+.+||+|+++|+|+++ |||||||+|+|++
T Consensus 73 ~~p~vsViIP~yNE~~-~i~~~l~sll~q~yp~~--eIivVdDgs~D~t------------------------------- 118 (444)
T PRK14583 73 GHPLVSILVPCFNEGL-NARETIHAALAQTYTNI--EVIAINDGSSDDT------------------------------- 118 (444)
T ss_pred CCCcEEEEEEeCCCHH-HHHHHHHHHHcCCCCCe--EEEEEECCCCccH-------------------------------
Confidence 4689999999999876 89999999999999987 9999999998872
Q ss_pred HhhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhcCCCEEEE
Q psy1765 130 ARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLVF 209 (867)
Q Consensus 130 a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A~Gd~llf 209 (867)
.+.+.++.++. +++++++.++|.|++.|+|.|++.|+|||+++
T Consensus 119 -----------------------------------~~~~~~~~~~~--~~v~vv~~~~n~Gka~AlN~gl~~a~~d~iv~ 161 (444)
T PRK14583 119 -----------------------------------AQVLDALLAED--PRLRVIHLAHNQGKAIALRMGAAAARSEYLVC 161 (444)
T ss_pred -----------------------------------HHHHHHHHHhC--CCEEEEEeCCCCCHHHHHHHHHHhCCCCEEEE
Confidence 33455555554 68999998889999999999999999999999
Q ss_pred EcCCcccCccchHHHHHHHHhcCC-ceeeeEEeeecCCCceeccccccccccccccccccccCCcCcCCCCCCCCCcccc
Q psy1765 210 LDSHIEVNTHWLEPLLVPIAERTN-TVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILS 288 (867)
Q Consensus 210 LDaD~~v~p~wLe~Ll~~l~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~ 288 (867)
+|+|+.++|++|+.+++.+.+++. ++|++.....+.+++.. ....+.+.... .... .. ... .-..
T Consensus 162 lDAD~~~~~d~L~~lv~~~~~~~~~g~v~g~~~~~~~~~~~~---~~~~~e~~~~~--~~~~--~~-----~~~--~g~~ 227 (444)
T PRK14583 162 IDGDALLDKNAVPYLVAPLIANPRTGAVTGNPRIRTRSTLIG---RVQVGEFSSII--GLIK--RT-----QRV--YGQV 227 (444)
T ss_pred ECCCCCcCHHHHHHHHHHHHhCCCeEEEEccceecCCCcchh---hHHHHHHHHHH--HHHH--HH-----HHH--hCCc
Confidence 999999999999999999987665 44443222222221110 00001110000 0000 00 000 0013
Q ss_pred cccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEcccEEEEEeccCCCCCCCCCCchhhhhhHHH
Q psy1765 289 PTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGHVFRSRRPYNNGHNEDPLTRNSLRV 368 (867)
Q Consensus 289 ~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V~H~~r~~~~y~~~~~~~~~~rN~~R~ 368 (867)
..++|+++++||++++++||||+++. .||+|+++|+..+|+++.+.|++.+++.. |.....+.+...|.
T Consensus 228 ~~~sG~~~~~rr~al~~vGg~~~~~i---~ED~dl~~rl~~~G~~i~~~p~a~~~~~~--------p~t~~~~~~Qr~RW 296 (444)
T PRK14583 228 FTVSGVVAAFRRRALADVGYWSPDMI---TEDIDISWKLQLKHWSVFFEPRGLCWILM--------PETLRGLWKQRLRW 296 (444)
T ss_pred eEecCceeEEEHHHHHHcCCCCCCcc---cccHHHHHHHHHcCCeEEEeeccEEeeeC--------CCCHHHHHHHHHHH
Confidence 45678999999999999999999864 79999999999999999999999888753 33444556666666
Q ss_pred HHhcHHHHHH
Q psy1765 369 AHVWMDEYIE 378 (867)
Q Consensus 369 a~~w~d~~~~ 378 (867)
+.-++..+..
T Consensus 297 ~~G~~~~~~~ 306 (444)
T PRK14583 297 AQGGAEVFLK 306 (444)
T ss_pred hCcHHHHHHH
Confidence 6555544443
|
|
| >cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.4e-25 Score=227.98 Aligned_cols=204 Identities=20% Similarity=0.260 Sum_probs=145.2
Q ss_pred EEEEeCCCChHHHHHHHHHHHhcCcc-ccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHHHhhhh
Q psy1765 56 VIICFYNEHPATLYRSVQTLLSRTGQ-SLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRARMFG 134 (867)
Q Consensus 56 VIIp~yNe~~~~l~~~l~Svl~qt~~-~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~a~~~g 134 (867)
||||+||++. .|.+||+||++|+++ .+ |||||||+|+|++
T Consensus 1 ViIp~yn~~~-~l~~~l~sl~~q~~~~~~--eiiVvDd~S~d~t------------------------------------ 41 (219)
T cd06913 1 IILPVHNGEQ-WLDECLESVLQQDFEGTL--ELSVFNDASTDKS------------------------------------ 41 (219)
T ss_pred CEEeecCcHH-HHHHHHHHHHhCCCCCCE--EEEEEeCCCCccH------------------------------------
Confidence 7999999765 999999999999987 46 9999999999883
Q ss_pred hhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEE----cCCCcCchhHHhHhhhhcCCCEEEEE
Q psy1765 135 AKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYR----TSKREGLIRARMFGAKYATGKVLVFL 210 (867)
Q Consensus 135 ~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~----~~~n~G~a~ArN~G~~~A~Gd~llfL 210 (867)
.+.+.++.+++...+++++. .+++.|++.|+|.|++.|+||||+||
T Consensus 42 ------------------------------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~a~N~g~~~a~gd~i~~l 91 (219)
T cd06913 42 ------------------------------AEIIEKWRKKLEDSGVIVLVGSHNSPSPKGVGYAKNQAIAQSSGRYLCFL 91 (219)
T ss_pred ------------------------------HHHHHHHHHhCcccCeEEEEecccCCCCccHHHHHHHHHHhcCCCEEEEE
Confidence 33455555554334677764 34568999999999999999999999
Q ss_pred cCCcccCccchHHHHHHHHhcCCceeeeEEeeecCCCce-eccccccccccccccccccccCCcCcCCCCCCCCCccccc
Q psy1765 211 DSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQ-YTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSP 289 (867)
Q Consensus 211 DaD~~v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~~~~-~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~~ 289 (867)
|+|+.+.|+||+.++..+.+++..++++.+.....+... +.. +.. .+......... . . ...+
T Consensus 92 D~D~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---------~~~-----~~~~~~~~~~~-~-~-~~~~ 154 (219)
T cd06913 92 DSDDVMMPQRIRLQYEAALQHPNSIIGCQVRRIPEDSTERYTR---------WIN-----TLTREQLLTQV-Y-T-SHGP 154 (219)
T ss_pred CCCccCChhHHHHHHHHHHhCCCcEEEEEEEecCcccchhhHH---------HHH-----hcCHHHHHHHH-H-h-hcCC
Confidence 999999999999999999877776666654333222110 000 000 00000000000 0 0 0001
Q ss_pred ccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEcccEEEEEe
Q psy1765 290 TMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGHVF 346 (867)
Q Consensus 290 ~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V~H~~ 346 (867)
.+....+++||++|+++||||+.+..+ +||+||++|+.++|+++.++|...+.+..
T Consensus 155 ~~~~~~~~~rr~~~~~~g~f~~~~~~~-~eD~~l~~r~~~~g~~i~~~~~~~~~yr~ 210 (219)
T cd06913 155 TVIMPTWFCSREWFSHVGPFDEGGKGV-PEDLLFFYEHLRKGGGVYRVDRCLLLYRY 210 (219)
T ss_pred ccccccceeehhHHhhcCCccchhccc-hhHHHHHHHHHHcCCceEEEcceeeeeee
Confidence 222233679999999999999987654 79999999999999999999987776544
|
This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified. |
| >TIGR01556 rhamnosyltran L-rhamnosyltransferase | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.7e-24 Score=235.07 Aligned_cols=198 Identities=16% Similarity=0.164 Sum_probs=143.6
Q ss_pred EeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHHHhhhhhhhh
Q psy1765 59 CFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRARMFGAKYA 138 (867)
Q Consensus 59 p~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~a~~~g~~~a 138 (867)
++||++.+.|.+||+||++|+ . |||||||+|+++.
T Consensus 1 Vtyn~~~~~l~~~l~sl~~q~---~--~iiVVDN~S~~~~---------------------------------------- 35 (281)
T TIGR01556 1 VTFNPDLEHLGELITSLPKQV---D--RIIAVDNSPHSDQ---------------------------------------- 35 (281)
T ss_pred CccCccHHHHHHHHHHHHhcC---C--EEEEEECcCCCcH----------------------------------------
Confidence 489976679999999999996 3 9999999987651
Q ss_pred ccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhc---CCCEEEEEcCCcc
Q psy1765 139 TGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYA---TGKVLVFLDSHIE 215 (867)
Q Consensus 139 ~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A---~Gd~llfLDaD~~ 215 (867)
.+.+.++.. ++|+++++++|.|+++|+|.|++.| .+|||+|||+|+.
T Consensus 36 ----------------------------~~~~~~~~~--~~i~~i~~~~N~G~a~a~N~Gi~~a~~~~~d~i~~lD~D~~ 85 (281)
T TIGR01556 36 ----------------------------PLKNARLRG--QKIALIHLGDNQGIAGAQNQGLDASFRRGVQGVLLLDQDSR 85 (281)
T ss_pred ----------------------------hHHHHhccC--CCeEEEECCCCcchHHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 122222223 6899999999999999999999998 7899999999999
Q ss_pred cCccchHHHHHHHHhcC--CceeeeEEeeecCCCceeccccccccccccccccccccCCcCcCCCCCCCCCccccccccc
Q psy1765 216 VNTHWLEPLLVPIAERT--NTVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMAG 293 (867)
Q Consensus 216 v~p~wLe~Ll~~l~~~~--~~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~G 293 (867)
+++++|+.+++.+..++ .++++|.+. +...-.........+ + .+.... . .....+..+..+.+
T Consensus 86 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~------~~~~~~---~---~~~~~~~~~~~~~~ 150 (281)
T TIGR01556 86 PGNAFLAAQWKLLSAENGQACALGPRFF--DRGTSRRLPAIHLDG-L------LLRQIS---L---DGLTTPQKTSFLIS 150 (281)
T ss_pred CCHHHHHHHHHHHHhcCCceEEECCeEE--cCCCcccCCceeecc-c------ceeeec---c---cccCCceeccEEEc
Confidence 99999999999998763 456666552 222111100000000 0 000000 0 00111223333344
Q ss_pred ceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEcccEEEEEec
Q psy1765 294 GLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGHVFR 347 (867)
Q Consensus 294 ~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V~H~~r 347 (867)
+.++++|++|+++|+|||.|+++ +||+|+|+|++++|+++.++|.+.+.|...
T Consensus 151 sg~li~~~~~~~iG~fde~~fi~-~~D~e~~~R~~~~G~~i~~~~~~~~~H~~g 203 (281)
T TIGR01556 151 SGCLITREVYQRLGMMDEELFID-HVDTEWSLRAQNYGIPLYIDPDIVLEHRIG 203 (281)
T ss_pred CcceeeHHHHHHhCCccHhhccc-chHHHHHHHHHHCCCEEEEeCCEEEEEecC
Confidence 44679999999999999999997 799999999999999999999999999753
|
Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids. |
| >TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111 | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.5e-25 Score=251.86 Aligned_cols=242 Identities=17% Similarity=0.172 Sum_probs=166.7
Q ss_pred CCCCcEEEEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhH
Q psy1765 49 STLPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLI 128 (867)
Q Consensus 49 ~~~P~vSVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 128 (867)
...|+||||||+|||+. .|.+||+|+++|+||....|||||||+|+|++
T Consensus 46 ~~~P~vsVIIP~yNe~~-~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T------------------------------ 94 (439)
T TIGR03111 46 GKLPDITIIIPVYNSED-TLFNCIESIYNQTYPIELIDIILANNQSTDDS------------------------------ 94 (439)
T ss_pred CCCCCEEEEEEeCCChH-HHHHHHHHHHhcCCCCCCeEEEEEECCCChhH------------------------------
Confidence 56799999999999875 99999999999999875448999999999883
Q ss_pred HHhhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhcCCCEEE
Q psy1765 129 RARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLV 208 (867)
Q Consensus 129 ~a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A~Gd~ll 208 (867)
.+.+.++.+.. ++++++..+++.|+++|+|.|++.++||||+
T Consensus 95 ------------------------------------~~il~~~~~~~--~~v~v~~~~~~~Gka~AlN~gl~~s~g~~v~ 136 (439)
T TIGR03111 95 ------------------------------------FQVFCRAQNEF--PGLSLRYMNSDQGKAKALNAAIYNSIGKYII 136 (439)
T ss_pred ------------------------------------HHHHHHHHHhC--CCeEEEEeCCCCCHHHHHHHHHHHccCCEEE
Confidence 23344444444 6788877777899999999999999999999
Q ss_pred EEcCCcccCccchHHHHHHHHhcCC-ceeeeEEeeecCCCceecccccccccccccc-ccccccCCcCcCCCCCCCCCcc
Q psy1765 209 FLDSHIEVNTHWLEPLLVPIAERTN-TVTVPIIDIINADTFQYTSSALVRGGFNWGL-HFKWENLPKGTLNSSEDFIKPI 286 (867)
Q Consensus 209 fLDaD~~v~p~wLe~Ll~~l~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l-~~~~~~~~~~~~~~~~~~~~p~ 286 (867)
++|+|+.++|++|+.+++.+.+++. +++++.+.. +.+...... +.+.+.+ ...+.................-
T Consensus 137 ~~DaD~~~~~d~L~~l~~~f~~~~~v~~v~g~~~~-~~~~~~~~~-----~~~~~~~~~~~~~~y~~~~l~~r~~~s~~~ 210 (439)
T TIGR03111 137 HIDSDGKLHKDAIKNMVTRFENNPDIHAMTGVILT-DKELIEKTK-----GRFLKLIRRCEYFEYAQAFLAGRNFESQVN 210 (439)
T ss_pred EECCCCCcChHHHHHHHHHHHhCCCeEEEEeEEec-Cchhhhhhc-----chhhhHhHHhHHHHHHHHHHhhhHHHHhcC
Confidence 9999999999999999999987765 444444421 111111000 0000000 0000000000000000000001
Q ss_pred cccccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHH-cCCeEEEEcccEEEEEeccCCCCCCCCCCchhhhhh
Q psy1765 287 LSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWM-CGGSLAMIPCSRIGHVFRSRRPYNNGHNEDPLTRNS 365 (867)
Q Consensus 287 ~~~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~-~G~~i~~~P~s~V~H~~r~~~~y~~~~~~~~~~rN~ 365 (867)
....++|+++++||++++++||||++.. +||+|+++|+++ .|+++.+.|.+.++|.. |.......+.+
T Consensus 211 ~~~~~sGa~~~~Rr~~l~~vggf~~~~i---~ED~~l~~rl~~~~g~kv~~~~~a~~~~~~--------p~t~~~~~~QR 279 (439)
T TIGR03111 211 SLFTLSGAFSAFRRETILKTQLYNSETV---GEDTDMTFQIRELLDGKVYLCENAIFYVDP--------IDGLNKLYTQR 279 (439)
T ss_pred CeEEEccHHHhhhHHHHHHhCCCCCCCc---CccHHHHHHHHHhcCCeEEECCCCEEEEEC--------CcCHHHHHHHH
Confidence 2245678999999999999999998763 799999999974 69999999999998854 22334556666
Q ss_pred HHHHHhcHHHH
Q psy1765 366 LRVAHVWMDEY 376 (867)
Q Consensus 366 ~R~a~~w~d~~ 376 (867)
.|.+.-++.-+
T Consensus 280 ~RW~rG~~qv~ 290 (439)
T TIGR03111 280 QRWQRGELEVS 290 (439)
T ss_pred HHHhccHHHHH
Confidence 67666655554
|
Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602). |
| >cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.7e-24 Score=222.70 Aligned_cols=174 Identities=18% Similarity=0.213 Sum_probs=143.3
Q ss_pred EEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHHHhhhhh
Q psy1765 56 VIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRARMFGA 135 (867)
Q Consensus 56 VIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~a~~~g~ 135 (867)
||||+||++. .|.+||+||++|+++.+ |||||||+|+|.+
T Consensus 1 viI~~~n~~~-~l~~~l~sl~~q~~~~~--eiiivD~~s~d~t------------------------------------- 40 (202)
T cd04185 1 AVVVTYNRLD-LLKECLDALLAQTRPPD--HIIVIDNASTDGT------------------------------------- 40 (202)
T ss_pred CEEEeeCCHH-HHHHHHHHHHhccCCCc--eEEEEECCCCcch-------------------------------------
Confidence 7999999765 99999999999999877 9999999999883
Q ss_pred hhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhc---CCCEEEEEcC
Q psy1765 136 KYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYA---TGKVLVFLDS 212 (867)
Q Consensus 136 ~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A---~Gd~llfLDa 212 (867)
.+.+.++... .+++++..++|.|.+.++|.|++.| ++||++|+|+
T Consensus 41 -----------------------------~~~~~~~~~~---~~i~~~~~~~n~g~~~~~n~~~~~a~~~~~d~v~~ld~ 88 (202)
T cd04185 41 -----------------------------AEWLTSLGDL---DNIVYLRLPENLGGAGGFYEGVRRAYELGYDWIWLMDD 88 (202)
T ss_pred -----------------------------HHHHHHhcCC---CceEEEECccccchhhHHHHHHHHHhccCCCEEEEeCC
Confidence 2233333222 2489999999999999999999876 7999999999
Q ss_pred CcccCccchHHHHHHHHhcCCceeeeEEeeecCCCceeccccccccccccccccccccCCcCcCCCCCCCCCcccccccc
Q psy1765 213 HIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMA 292 (867)
Q Consensus 213 D~~v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 292 (867)
|+.++|+||+.+++.+.+...++++|.+...++ .
T Consensus 89 D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~----------------------------------------------~ 122 (202)
T cd04185 89 DAIPDPDALEKLLAYADKDNPQFLAPLVLDPDG----------------------------------------------S 122 (202)
T ss_pred CCCcChHHHHHHHHHHhcCCceEecceeEcCCC----------------------------------------------c
Confidence 999999999999999984445555554311100 2
Q ss_pred cceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEcccEEEEEeccC
Q psy1765 293 GGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGHVFRSR 349 (867)
Q Consensus 293 G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V~H~~r~~ 349 (867)
+++++++|++|+++|+||+.+.++ +||+|+++|+.++|+++ ++|.+.+.|....+
T Consensus 123 ~~~~~~~~~~~~~~g~~~~~~~~~-~eD~~~~~r~~~~G~~i-~~~~~~~~h~~~~~ 177 (202)
T cd04185 123 FVGVLISRRVVEKIGLPDKEFFIW-GDDTEYTLRASKAGPGI-YVPDAVVVHKTAIN 177 (202)
T ss_pred eEEEEEeHHHHHHhCCCChhhhcc-chHHHHHHHHHHcCCcE-EecceEEEEccccc
Confidence 345789999999999999998887 79999999999999999 99999999976443
|
GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. |
| >cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.8e-24 Score=226.57 Aligned_cols=198 Identities=16% Similarity=0.146 Sum_probs=143.3
Q ss_pred EEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHHHhhhhh
Q psy1765 56 VIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRARMFGA 135 (867)
Q Consensus 56 VIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~a~~~g~ 135 (867)
+|||+||++.+.|.+||+||++| .. |||||||+|+|.+
T Consensus 1 ~vI~~yn~~~~~l~~~l~sl~~q---~~--~iivvDn~s~~~~------------------------------------- 38 (237)
T cd02526 1 AVVVTYNPDLSKLKELLAALAEQ---VD--KVVVVDNSSGNDI------------------------------------- 38 (237)
T ss_pred CEEEEecCCHHHHHHHHHHHhcc---CC--EEEEEeCCCCccH-------------------------------------
Confidence 58999998845999999999998 34 9999999988762
Q ss_pred hhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhcCC---CEEEEEcC
Q psy1765 136 KYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATG---KVLVFLDS 212 (867)
Q Consensus 136 ~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A~G---d~llfLDa 212 (867)
....++ ..+++++++.++|.|+++|+|.|++.|+| |||+|+|+
T Consensus 39 ------------------------------~~~~~~----~~~~i~~i~~~~n~G~~~a~N~g~~~a~~~~~d~v~~lD~ 84 (237)
T cd02526 39 ------------------------------ELRLRL----NSEKIELIHLGENLGIAKALNIGIKAALENGADYVLLFDQ 84 (237)
T ss_pred ------------------------------HHHhhc----cCCcEEEEECCCceehHHhhhHHHHHHHhCCCCEEEEECC
Confidence 111111 12689999999999999999999999988 99999999
Q ss_pred CcccCccchHHHH---HHHHhcCC-ceeeeEEeeecCCCceeccccccccccccccccccccCCcCcCCCCCCCCCcccc
Q psy1765 213 HIEVNTHWLEPLL---VPIAERTN-TVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILS 288 (867)
Q Consensus 213 D~~v~p~wLe~Ll---~~l~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~ 288 (867)
|+.++|+||+.++ ..+.+++. ++++|.+...+....... .. ...+.. .. ...........
T Consensus 85 D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~---~~--------~~~~~~~~~~~ 148 (237)
T cd02526 85 DSVPPPDMVEKLLAYKILSDKNSNIGAVGPRIIDRRTGENSPG---VR--KSGYKL---RI--------QKEGEEGLKEV 148 (237)
T ss_pred CCCcCHhHHHHHHHHHHhhccCCCeEEEeeeEEcCCCCeeccc---ee--ccCccc---ee--------cccccCCceEe
Confidence 9999999999995 44444544 445554432221111000 00 000000 00 00001112234
Q ss_pred cccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEcccEEEEEe
Q psy1765 289 PTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGHVF 346 (867)
Q Consensus 289 ~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V~H~~ 346 (867)
..+.+++++++|++|+++||||+.++. ++||+||++|+.++|+++.++|.+.|.|..
T Consensus 149 ~~~~~~~~~~rr~~~~~~ggfd~~~~~-~~eD~d~~~r~~~~G~~~~~~~~~~v~h~~ 205 (237)
T cd02526 149 DFLITSGSLISLEALEKVGGFDEDLFI-DYVDTEWCLRARSKGYKIYVVPDAVLKHEL 205 (237)
T ss_pred eeeeccceEEcHHHHHHhCCCCHHHcC-ccchHHHHHHHHHcCCcEEEEcCeEEEecc
Confidence 455677789999999999999999875 489999999999999999999999999965
|
Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen. |
| >cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.2e-24 Score=224.98 Aligned_cols=207 Identities=18% Similarity=0.204 Sum_probs=151.0
Q ss_pred cEEEEEEeCCCChHHHHHHHHHHHhcCcc--ccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHHH
Q psy1765 53 STSVIICFYNEHPATLYRSVQTLLSRTGQ--SLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRA 130 (867)
Q Consensus 53 ~vSVIIp~yNe~~~~l~~~l~Svl~qt~~--~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~a 130 (867)
++|||||+||++. .|.++|+|+++|+++ ++ |||||||+|+|++
T Consensus 1 ~~sIiip~~n~~~-~l~~~l~sl~~q~~~~~~~--evivvd~~s~d~~-------------------------------- 45 (249)
T cd02525 1 FVSIIIPVRNEEK-YIEELLESLLNQSYPKDLI--EIIVVDGGSTDGT-------------------------------- 45 (249)
T ss_pred CEEEEEEcCCchh-hHHHHHHHHHhccCCCCcc--EEEEEeCCCCccH--------------------------------
Confidence 4899999999875 999999999999985 55 9999999998872
Q ss_pred hhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhcCCCEEEEE
Q psy1765 131 RMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLVFL 210 (867)
Q Consensus 131 ~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A~Gd~llfL 210 (867)
.+.+..+.++. +.++++.++ +.|.+.|+|.|++.|++|||+||
T Consensus 46 ----------------------------------~~~~~~~~~~~--~~v~~i~~~-~~~~~~a~N~g~~~a~~d~v~~l 88 (249)
T cd02525 46 ----------------------------------REIVQEYAAKD--PRIRLIDNP-KRIQSAGLNIGIRNSRGDIIIRV 88 (249)
T ss_pred ----------------------------------HHHHHHHHhcC--CeEEEEeCC-CCCchHHHHHHHHHhCCCEEEEE
Confidence 23344444433 679999877 67899999999999999999999
Q ss_pred cCCcccCccchHHHHHHHHhcCCceeeeEEeeecCCCceeccccccccccccccccccccCCcCcCCCCCCCCCcccccc
Q psy1765 211 DSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPT 290 (867)
Q Consensus 211 DaD~~v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~ 290 (867)
|+|+.++|+||+.+++.+.+.+..++++............ .+.+........ ........ .......
T Consensus 89 D~D~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~--------~~~~~~~~~~~~--~~~~~~~~---~~~~~~~ 155 (249)
T cd02525 89 DAHAVYPKDYILELVEALKRTGADNVGGPMETIGESKFQK--------AIAVAQSSPLGS--GGSAYRGG---AVKIGYV 155 (249)
T ss_pred CCCccCCHHHHHHHHHHHhcCCCCEEecceecCCCChHHH--------HHHHHhhchhcc--CCcccccc---ccccccc
Confidence 9999999999999999888776666655443322221110 000000000000 00000000 0000234
Q ss_pred cccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEcccEEEEEe
Q psy1765 291 MAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGHVF 346 (867)
Q Consensus 291 ~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V~H~~ 346 (867)
..|++++++|++|.++|+||+.+.. +||.||++|++++|+++.++|.+.+.|..
T Consensus 156 ~~~~~~~~~~~~~~~~g~~~~~~~~--~eD~~l~~r~~~~G~~~~~~~~~~~~~~~ 209 (249)
T cd02525 156 DTVHHGAYRREVFEKVGGFDESLVR--NEDAELNYRLRKAGYKIWLSPDIRVYYYP 209 (249)
T ss_pred cccccceEEHHHHHHhCCCCcccCc--cchhHHHHHHHHcCcEEEEcCCeEEEEcC
Confidence 5678889999999999999998753 79999999999999999999999998865
|
Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus. |
| >PRK10018 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-23 Score=226.61 Aligned_cols=203 Identities=17% Similarity=0.214 Sum_probs=141.5
Q ss_pred CCCcEEEEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHH
Q psy1765 50 TLPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIR 129 (867)
Q Consensus 50 ~~P~vSVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~ 129 (867)
..|.||||||+||++. .|.+||+||++|+++++ |||||||||++.
T Consensus 3 ~~p~VSVIip~yN~~~-~l~~~l~Svl~Qt~~~~--EiIVVDDgS~~~-------------------------------- 47 (279)
T PRK10018 3 DNPLISIYMPTWNRQQ-LAIRAIKSVLRQDYSNW--EMIIVDDCSTSW-------------------------------- 47 (279)
T ss_pred CCCEEEEEEEeCCCHH-HHHHHHHHHHhCCCCCe--EEEEEECCCCCH--------------------------------
Confidence 4689999999999776 99999999999999998 999999999853
Q ss_pred HhhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhcCCCEEEE
Q psy1765 130 ARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLVF 209 (867)
Q Consensus 130 a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A~Gd~llf 209 (867)
+.+.++++....++|++++++.|.|.+.|+|.|++.|+||||+|
T Consensus 48 ------------------------------------~~~~~~~~~~~~~ri~~i~~~~n~G~~~a~N~gi~~a~g~~I~~ 91 (279)
T PRK10018 48 ------------------------------------EQLQQYVTALNDPRITYIHNDINSGACAVRNQAIMLAQGEYITG 91 (279)
T ss_pred ------------------------------------HHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHcCCCEEEE
Confidence 22444544433478999999999999999999999999999999
Q ss_pred EcCCcccCccchHHHHHHHHhcCC-ceeeeEEeeecCCCceeccccccccccccccccccccCCcCcCCCCCCCCCcccc
Q psy1765 210 LDSHIEVNTHWLEPLLVPIAERTN-TVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILS 288 (867)
Q Consensus 210 LDaD~~v~p~wLe~Ll~~l~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~ 288 (867)
||+|+.+.|++|+.+++.+.+... ..+... +.+.... .+ + ...... ..+..... . ..+..
T Consensus 92 lDaDD~~~p~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~-------~---~~~~~~--~~p~~~~~----~-~~~~~ 152 (279)
T PRK10018 92 IDDDDEWTPNRLSVFLAHKQQLVTHAFLYAN-DYVCQGE-VY-------S---QPASLP--LYPKSPYS----R-RLFYK 152 (279)
T ss_pred ECCCCCCCccHHHHHHHHHHhCCCccEEEcc-ceeecCc-cc-------c---cccccC--CCCCCCCC----H-HHHHH
Confidence 999999999999999999876432 222211 0111000 00 0 000000 00000000 0 00001
Q ss_pred cccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEccc-EEEEE
Q psy1765 289 PTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCS-RIGHV 345 (867)
Q Consensus 289 ~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s-~V~H~ 345 (867)
....|...++++..+. .++|||.+.. .||.||++|+...|+.+..+|.+ .++|+
T Consensus 153 ~n~ig~~~~~~~~~~~-~~~fd~~~~~--~eDydlwlrl~~~~~~~~~~~~~l~~y~~ 207 (279)
T PRK10018 153 RNIIGNQVFTWAWRFK-ECLFDTELKA--AQDYDIFLRMVVEYGEPWKVEEATQILHI 207 (279)
T ss_pred hcCcCceeeehhhhhh-hcccCCCCCc--cccHHHHHHHHHhcCceEeeccceEEEEc
Confidence 1223444455555554 5789999874 79999999999999999999987 55665
|
|
| >KOG3738|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=1e-24 Score=230.02 Aligned_cols=350 Identities=27% Similarity=0.426 Sum_probs=212.5
Q ss_pred CceEEEEeccchhhHHHhhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcC----CCCEEEEEcCCCc
Q psy1765 114 GRVHLYRTSKREGLIRARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLN----NGRVHLYRTSKRE 189 (867)
Q Consensus 114 ~~~~~~~~~~~~gi~~a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~----~~~vrii~~~~n~ 189 (867)
.++++.++.+|+|++++|+.|+..|.|.+.. +|+..+.|+-+.-.| +-+-++... .|-|.+|..+ |+
T Consensus 179 ~kvr~LRN~~ReGLirSRvrGAdvA~a~vlt--FLDSHcEvN~~WLeP------LL~Rvaed~trvVsPiiDvIn~d-nf 249 (559)
T KOG3738|consen 179 PKVRVLRNNEREGLIRSRVRGADVAQATVLT--FLDSHCEVNEGWLEP------LLERVAEDTTRVVSPIIDVINLD-NF 249 (559)
T ss_pred heeeeecccchhhhhhhhccccccccceEEE--EEecceeecchhhHH------HHHHHhhcccceeeccccccccc-cc
Confidence 3688999999999999999999999999876 788888888765543 333333321 1344555554 55
Q ss_pred CchhHHhHhhhhcCCCEEEEEcCCcccCccchHHHHHHHH--hcCC-----ceeeeEEeeecCCCcee----cccccccc
Q psy1765 190 GLIRARMFGAKYATGKVLVFLDSHIEVNTHWLEPLLVPIA--ERTN-----TVTVPIIDIINADTFQY----TSSALVRG 258 (867)
Q Consensus 190 G~a~ArN~G~~~A~Gd~llfLDaD~~v~p~wLe~Ll~~l~--~~~~-----~vv~p~i~~i~~~~~~~----~~~~~~~g 258 (867)
.+.+|. +.-+|-| |..+.-.|...-++.-. .+|+ -++++.+..|+..-|.+ ......+|
T Consensus 250 ~Y~~as----adLrGGF------DWsLhF~We~~~~eqr~sr~~Pt~PirtP~iAGGlfvidk~wF~~LGkyd~~mdiWG 319 (559)
T KOG3738|consen 250 SYVGAS----ADLRGGF------DWSLHFKWEQMQLEQRESRADPTAPIRTPAIAGGLFVIDKEWFNELGKYDMDMDIWG 319 (559)
T ss_pred ccccch----hhhcCCc------ceEEEEEehhcCHHHHhhccCCCCcccCccccceeEEecHHHHHHhcccCccccccC
Confidence 443321 1123332 44444456543333222 2332 23333444555443332 22345566
Q ss_pred ccccccccccccCCcCcCCCCCCCCCcccccccccceEeE-e--H--HHHHHhCCCCCCCCCCcccchHHHHHHHHcCCe
Q psy1765 259 GFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMAGGLFAI-D--R--QYFDSLGQYDAGLEIWGGENLELSFRIWMCGGS 333 (867)
Q Consensus 259 ~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~ai-r--R--~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~ 333 (867)
|-+..+.|+ .+++||.+=| . | -+|.+--.|+ | . |+.+.
T Consensus 320 GEn~Elsfr---------------------vW~CGGslEIvPCSRVGHVFRkrHpy~--F-P-~gs~~------------ 362 (559)
T KOG3738|consen 320 GENLELSFR---------------------VWQCGGSLEIVPCSRVGHVFRKRHPYT--F-P-GGSGN------------ 362 (559)
T ss_pred CcceEEEEE---------------------EEeeCCeeEEEeccchhhhhhccCCCc--C-C-CCCCc------------
Confidence 655555544 1333333211 1 0 1122111111 0 0 11110
Q ss_pred EEEEcccEEEEEeccCCCCCCCCCCchhhhhhHHHHHhcHHHHHHHHhhcCCCcCCCCCCCchhHHHHHHHcCCcccccc
Q psy1765 334 LAMIPCSRIGHVFRSRRPYNNGHNEDPLTRNSLRVAHVWMDEYIEHFLKQRPEARNIDYGDVTDRKQLRARLGCKSFKWY 413 (867)
Q Consensus 334 i~~~P~s~V~H~~r~~~~y~~~~~~~~~~rN~~R~a~~w~d~~~~~~y~~~p~~~~~~~gdi~~r~~lr~~l~ck~F~Wy 413 (867)
-|. +|.+|.||+||||||.+||+.+|.++.+.||++.+|+++|++++||||+||
T Consensus 363 -----------------ty~---------~NTkr~AEvWmDEYK~~yyaarPsAr~vpfg~i~~rL~~Rk~l~CksFkWY 416 (559)
T KOG3738|consen 363 -----------------TYI---------KNTKRAAEVWMDEYKNYYYAARPSARRVPFGNIYDRLELRKKLRCKSFKWY 416 (559)
T ss_pred -----------------chh---------hcchHHHHHHHHHHHHHHHhcCchhhcCCCccHHHHHHHHhhcCCcchhhh
Confidence 111 578999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCcCCCchHHHHhhhhccccCCCCCCCccccccccCceeEEEeecchhhhhhhccCcccCCCCccCCchhHhhh
Q psy1765 414 LDNVYPEMILPSDDEERLKKKWAQVEQPKFQPWYSRARNYTNSLRVAHVWMDEYIEHFLKQRPEARNIDYGDVTDRKQLR 493 (867)
Q Consensus 414 l~~v~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~s~~~~~~N~~R~aeVWmDeyk~~~y~~~p~~~~~~~gdis~r~~LR 493 (867)
|+||||||.+|.+..... . .+|--..|+|.-.+.- .+
T Consensus 417 LenVyPeL~ip~~~~~~~-------------------g----~lrqg~~Cl~s~~~~~---~~----------------- 453 (559)
T KOG3738|consen 417 LENVYPELRIPFKELIAT-------------------G----TLRQGDNCLDSQGQNS---QE----------------- 453 (559)
T ss_pred hhhcCcceeccccccccc-------------------c----chhccchhhhhhhccc---cc-----------------
Confidence 999999999997765421 0 1122222333322110 00
Q ss_pred hhccccccccccccccCccccCCCcHHHHhhhhhcccCCCcccccccccccccceeeeecCCCceecccCCCCCCCcEEE
Q psy1765 494 ARLGCKSFKWYLDNVYPEMILPSDDEERLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSSTDLCLTSKVDKTKGSPLVL 573 (867)
Q Consensus 494 ~~l~CksF~Wyl~nv~p~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~rn~~~~g~ir~~~~~~CLD~~~~~~~g~~v~l 573 (867)
.+. ..+|... .-|++|... | ..+-.+...++||++.. .++|.+|.|
T Consensus 454 ---------------~~g-l~~C~~s-~~nqqwa~~-------~---------t~~~~~~~~elCL~v~~-~~pg~~v~l 499 (559)
T KOG3738|consen 454 ---------------ALG-LASCHGS-GGNQQWAFL-------R---------TSTQLITHRELCLAVGS-NTPGSPVAL 499 (559)
T ss_pred ---------------Ccc-eeecccC-CCCcchhhh-------h---------hhhhHHHHHhhhheeec-CCCCCeEEE
Confidence 000 1233331 224555532 0 11122356899999864 578999999
Q ss_pred EecCCCCCCceeeecCCCceEEeeceeeecCC-Cc--cEEEeCCCCCCCcce
Q psy1765 574 KKCDELSKTQHWSKTDKSELVLAELLCLDAGA-TK--PKLTKCHEMGGSQEY 622 (867)
Q Consensus 574 ~~C~~~~~~Q~w~~t~~~~i~~~~~~CLd~~g-~~--v~l~~C~~~~~~Q~~ 622 (867)
.+|......|.|.-.........+.+|||... +. +.+..|......|.|
T Consensus 500 ~~C~~~e~~q~~v~~~~~l~h~~s~KOGd~~~~g~~~l~~~~C~~~~~sQ~w 551 (559)
T KOG3738|consen 500 VPCGNNETKQRWVELGGHLLHAGSHLCLDNPLKGRWLLEVSTCESHLVSQSW 551 (559)
T ss_pred EecCCCCCceEEEecCCchhcccccceeccccCCCcceeeccccccccccee
Confidence 99998888999988776665567899999873 33 678899888777875
|
|
| >cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.6e-24 Score=220.98 Aligned_cols=205 Identities=19% Similarity=0.172 Sum_probs=143.9
Q ss_pred EEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHHHhhhhh
Q psy1765 56 VIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRARMFGA 135 (867)
Q Consensus 56 VIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~a~~~g~ 135 (867)
||||+||++. .|.+||+||+.|++++...|||||||+|+|++
T Consensus 1 viip~~n~~~-~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t------------------------------------- 42 (229)
T cd04192 1 VVIAARNEAE-NLPRLLQSLSALDYPKEKFEVILVDDHSTDGT------------------------------------- 42 (229)
T ss_pred CEEEecCcHH-HHHHHHHHHHhCCCCCCceEEEEEcCCCCcCh-------------------------------------
Confidence 7999999765 99999999999999882229999999998883
Q ss_pred hhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcC--CCcCchhHHhHhhhhcCCCEEEEEcCC
Q psy1765 136 KYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTS--KREGLIRARMFGAKYATGKVLVFLDSH 213 (867)
Q Consensus 136 ~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~--~n~G~a~ArN~G~~~A~Gd~llfLDaD 213 (867)
.+.+. +......++++++..+ .+.|.+.|+|.|++.++||||+|+|+|
T Consensus 43 -----------------------------~~~~~-~~~~~~~~~v~~~~~~~~~~~g~~~a~n~g~~~~~~d~i~~~D~D 92 (229)
T cd04192 43 -----------------------------VQILE-FAAAKPNFQLKILNNSRVSISGKKNALTTAIKAAKGDWIVTTDAD 92 (229)
T ss_pred -----------------------------HHHHH-HHHhCCCcceEEeeccCcccchhHHHHHHHHHHhcCCEEEEECCC
Confidence 22233 2223334678888876 588999999999999999999999999
Q ss_pred cccCccchHHHHHHHHhcCCceeeeEEeeecCCCceeccccccccccccccccccccCCcCcCCCCCCCCCccccccccc
Q psy1765 214 IEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMAG 293 (867)
Q Consensus 214 ~~v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~G 293 (867)
+.+.|+||+.+++.+.+++..++++.......+.+.... ..+.+....... . ... .........|
T Consensus 93 ~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~--~-~~~-------~~~~~~~~~g 157 (229)
T cd04192 93 CVVPSNWLLTFVAFIQKEQIGLVAGPVIYFKGKSLLAKF-----QRLDWLSLLGLI--A-GSF-------GLGKPFMCNG 157 (229)
T ss_pred cccCHHHHHHHHHHhhcCCCcEEeeeeeecCCccHHHHH-----HHHHHHHHHHHH--h-hHH-------HhcCcccccc
Confidence 999999999999998877666555443222122111000 000000000000 0 000 0001124468
Q ss_pred ceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCC-eEEEEc--ccEEEE
Q psy1765 294 GLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGG-SLAMIP--CSRIGH 344 (867)
Q Consensus 294 ~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~-~i~~~P--~s~V~H 344 (867)
++++++|++|+++||||+.++.+ .||.|+++|+.+.|+ ++.+++ .+.++|
T Consensus 158 ~~~~~rr~~~~~~ggf~~~~~~~-~eD~~~~~~~~~~g~~~~~~~~~~~~~~~~ 210 (229)
T cd04192 158 ANMAYRKEAFFEVGGFEGNDHIA-SGDDELLLAKVASKYPKVAYLKNPEALVTT 210 (229)
T ss_pred ceEEEEHHHHHHhcCCccccccc-cCCHHHHHHHHHhCCCCEEEeeCcchheec
Confidence 89999999999999999987665 899999999999999 888874 444443
|
GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. |
| >TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.6e-24 Score=241.80 Aligned_cols=211 Identities=17% Similarity=0.215 Sum_probs=147.3
Q ss_pred CCCCcEEEEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhH
Q psy1765 49 STLPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLI 128 (867)
Q Consensus 49 ~~~P~vSVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 128 (867)
...|.||||||+|||+. .|.+||+|+++|+||++ |||||||+|+|.+
T Consensus 38 ~~~p~VSViiP~~nee~-~l~~~L~Sl~~q~Yp~~--EIivvdd~s~D~t------------------------------ 84 (373)
T TIGR03472 38 RAWPPVSVLKPLHGDEP-ELYENLASFCRQDYPGF--QMLFGVQDPDDPA------------------------------ 84 (373)
T ss_pred CCCCCeEEEEECCCCCh-hHHHHHHHHHhcCCCCe--EEEEEeCCCCCcH------------------------------
Confidence 34689999999999887 99999999999999998 9999999998872
Q ss_pred HHhhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCc---hhHHhHhhhhcCCC
Q psy1765 129 RARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGL---IRARMFGAKYATGK 205 (867)
Q Consensus 129 ~a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~---a~ArN~G~~~A~Gd 205 (867)
.+.++++.++++..+|+++..+++.|. ..+.+.+++.|+||
T Consensus 85 ------------------------------------~~iv~~~~~~~p~~~i~~v~~~~~~G~~~K~~~l~~~~~~a~ge 128 (373)
T TIGR03472 85 ------------------------------------LAVVRRLRADFPDADIDLVIDARRHGPNRKVSNLINMLPHARHD 128 (373)
T ss_pred ------------------------------------HHHHHHHHHhCCCCceEEEECCCCCCCChHHHHHHHHHHhccCC
Confidence 344555655553346888887777764 34455578999999
Q ss_pred EEEEEcCCcccCccchHHHHHHHHhcCCceeeeEEeeecCCCceeccccccccccccccccccccCCcCcCCCCCCCCCc
Q psy1765 206 VLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKP 285 (867)
Q Consensus 206 ~llfLDaD~~v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p 285 (867)
+|+|+|+|+.++|+||+.+++.+++...++|++........++... ......+. ...+........ .
T Consensus 129 ~i~~~DaD~~~~p~~L~~lv~~~~~~~v~~V~~~~~~~~~~~~~~~---l~~~~~~~------~~~~~~~~~~~~---~- 195 (373)
T TIGR03472 129 ILVIADSDISVGPDYLRQVVAPLADPDVGLVTCLYRGRPVPGFWSR---LGAMGINH------NFLPSVMVARAL---G- 195 (373)
T ss_pred EEEEECCCCCcChhHHHHHHHHhcCCCcceEeccccCCCCCCHHHH---HHHHHhhh------hhhHHHHHHHhc---c-
Confidence 9999999999999999999999975555666543221111111000 00000000 000000000000 0
Q ss_pred ccccccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEcccEEE
Q psy1765 286 ILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIG 343 (867)
Q Consensus 286 ~~~~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V~ 343 (867)
......|++|++||++|+++||||+..... .||++|+.|+.++|+++.+.|.+...
T Consensus 196 -~~~~~~G~~~a~RR~~l~~iGGf~~~~~~~-~ED~~l~~~i~~~G~~v~~~~~~v~~ 251 (373)
T TIGR03472 196 -RARFCFGATMALRRATLEAIGGLAALAHHL-ADDYWLGELVRALGLRVVLAPVVVDT 251 (373)
T ss_pred -CCccccChhhheeHHHHHHcCChHHhcccc-hHHHHHHHHHHHcCCeEEecchhhhc
Confidence 112356889999999999999999755443 79999999999999999999876433
|
This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano |
| >PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.3e-23 Score=228.12 Aligned_cols=210 Identities=23% Similarity=0.341 Sum_probs=145.4
Q ss_pred EEEEEeCCCCh-----HHHHHHHHHHHh-cCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhH
Q psy1765 55 SVIICFYNEHP-----ATLYRSVQTLLS-RTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLI 128 (867)
Q Consensus 55 SVIIp~yNe~~-----~~l~~~l~Svl~-qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 128 (867)
|||||++|... +.|..||.++.. +..+++ |||||||+|++..
T Consensus 1 SiIIPv~~~~~~~~i~~~l~~~l~~l~~~~~~~~~--eiIvvd~~s~~~~------------------------------ 48 (281)
T PF10111_consen 1 SIIIPVRNRSERPDILERLRNCLESLSQFQSDPDF--EIIVVDDGSSDEF------------------------------ 48 (281)
T ss_pred CEEEEecCCccchHHHHHHHHHHHHHHhcCCCCCE--EEEEEECCCchhH------------------------------
Confidence 79999999763 356677888877 445566 9999999988761
Q ss_pred HHhhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCC---CcCchhHHhHhhhhcCCC
Q psy1765 129 RARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSK---REGLIRARMFGAKYATGK 205 (867)
Q Consensus 129 ~a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~---n~G~a~ArN~G~~~A~Gd 205 (867)
.+.+.++.+.. ..++++..+. ..|.+.|||.|++.|++|
T Consensus 49 ------------------------------------~~~l~~~~~~~--~~~~~i~~~~~~~~f~~a~arN~g~~~A~~d 90 (281)
T PF10111_consen 49 ------------------------------------DEELKKLCEKN--GFIRYIRHEDNGEPFSRAKARNIGAKYARGD 90 (281)
T ss_pred ------------------------------------HHHHHHHHhcc--CceEEEEcCCCCCCcCHHHHHHHHHHHcCCC
Confidence 23345555443 3344665553 469999999999999999
Q ss_pred EEEEEcCCcccCccchHHHHH---HHHhcCC-ceeeeEEeeecCCCceeccccccccccccccccccccCCcCcCCCCCC
Q psy1765 206 VLVFLDSHIEVNTHWLEPLLV---PIAERTN-TVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSED 281 (867)
Q Consensus 206 ~llfLDaD~~v~p~wLe~Ll~---~l~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~ 281 (867)
+|+|+|+|++++|++|+.++. .+..++. .++.|....-...+..+... ....+...+. ..... .
T Consensus 91 ~l~flD~D~i~~~~~i~~~~~~~~~l~~~~~~~~~~p~~yl~~~~~~~~~~~----~~~~~~~~~~-----~~~~~---~ 158 (281)
T PF10111_consen 91 YLIFLDADCIPSPDFIEKLLNHVKKLDKNPNAFLVYPCLYLSEEGSEKFYSQ----FKNLWDHEFL-----ESFIS---G 158 (281)
T ss_pred EEEEEcCCeeeCHHHHHHHHHHHHHHhcCCCceEEEeeeeccchhhHHHhhc----chhcchHHHH-----HHHhh---c
Confidence 999999999999999999999 6766654 44556442221111111000 0000000000 00000 0
Q ss_pred CCCcccccccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEcccEEEEEe
Q psy1765 282 FIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGHVF 346 (867)
Q Consensus 282 ~~~p~~~~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V~H~~ 346 (867)
.........+.|+|++++|+.|.++|||||+|..||+||+||+.|+.+.|..+...|...++|..
T Consensus 159 ~~~~~~~~~~~s~~~~i~r~~f~~iGGfDE~f~G~G~ED~D~~~RL~~~~~~~~~~~~~~~~~~~ 223 (281)
T PF10111_consen 159 KNSLWEFIAFASSCFLINREDFLEIGGFDERFRGWGYEDIDFGYRLKKAGYKFKRSPDYLVYHSH 223 (281)
T ss_pred cccccccccccceEEEEEHHHHHHhCCCCccccCCCcchHHHHHHHHHcCCcEecChHHhccccc
Confidence 00111234556799999999999999999999999999999999999999999999999998864
|
|
| >cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.5e-23 Score=211.17 Aligned_cols=194 Identities=19% Similarity=0.263 Sum_probs=143.2
Q ss_pred EEEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHHHhhhh
Q psy1765 55 SVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRARMFG 134 (867)
Q Consensus 55 SVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~a~~~g 134 (867)
|||||+||++ +.|.+||.||++|+++++ |||||||+|+|++
T Consensus 1 sivi~~~n~~-~~l~~~l~sl~~q~~~~~--evivvDd~s~d~~------------------------------------ 41 (202)
T cd06433 1 SIITPTYNQA-ETLEETIDSVLSQTYPNI--EYIVIDGGSTDGT------------------------------------ 41 (202)
T ss_pred CEEEeccchH-HHHHHHHHHHHhCCCCCc--eEEEEeCCCCccH------------------------------------
Confidence 7999999976 499999999999999987 9999999999882
Q ss_pred hhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhcCCCEEEEEcCCc
Q psy1765 135 AKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLVFLDSHI 214 (867)
Q Consensus 135 ~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A~Gd~llfLDaD~ 214 (867)
.+.+..+.. .+.++...++.|++.|+|.|++.|+||||+|+|+|+
T Consensus 42 ------------------------------~~~~~~~~~-----~~~~~~~~~~~g~~~a~n~~~~~a~~~~v~~ld~D~ 86 (202)
T cd06433 42 ------------------------------VDIIKKYED-----KITYWISEPDKGIYDAMNKGIALATGDIIGFLNSDD 86 (202)
T ss_pred ------------------------------HHHHHHhHh-----hcEEEEecCCcCHHHHHHHHHHHcCCCEEEEeCCCc
Confidence 223333321 234455567999999999999999999999999999
Q ss_pred ccCccchHHHHHHHHhcC-CceeeeEEeeecCCCceeccccccccccccccccccccCCcCcCCCCCCCCCccccccccc
Q psy1765 215 EVNTHWLEPLLVPIAERT-NTVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMAG 293 (867)
Q Consensus 215 ~v~p~wLe~Ll~~l~~~~-~~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~G 293 (867)
.+.++++..++..+...+ ..++++.....+.+........ ..... .........+.+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~~~~~~~~~-----------------~~~~~-----~~~~~~~~~~~~ 144 (202)
T cd06433 87 TLLPGALLAVVAAFAEHPEVDVVYGDVLLVDENGRVIGRRR-----------------PPPFL-----DKFLLYGMPICH 144 (202)
T ss_pred ccCchHHHHHHHHHHhCCCccEEEeeeEEEcCCCCcccCCC-----------------Ccchh-----hhHHhhcCcccC
Confidence 999999999997666554 4566555433332221110000 00000 000011234556
Q ss_pred ceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEcccEEEEEe
Q psy1765 294 GLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGHVF 346 (867)
Q Consensus 294 ~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V~H~~ 346 (867)
++++++|++|+++|+||+.+.. +||.||++|+++.|+++.++|...+.|..
T Consensus 145 ~~~~~~~~~~~~~~~f~~~~~~--~~D~~~~~r~~~~g~~~~~~~~~~~~~~~ 195 (202)
T cd06433 145 QATFFRRSLFEKYGGFDESYRI--AADYDLLLRLLLAGKIFKYLPEVLAAFRL 195 (202)
T ss_pred cceEEEHHHHHHhCCCchhhCc--hhhHHHHHHHHHcCCceEecchhhhhhee
Confidence 6788999999999999998864 68999999999999999999988877654
|
Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. |
| >cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
Probab=99.90 E-value=5e-23 Score=203.42 Aligned_cols=164 Identities=23% Similarity=0.360 Sum_probs=140.9
Q ss_pred EEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHHHhhhhh
Q psy1765 56 VIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRARMFGA 135 (867)
Q Consensus 56 VIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~a~~~g~ 135 (867)
||||+||+. ..|.++|.|+.+|+++.+ |||||||+|++.+
T Consensus 1 vii~~~~~~-~~l~~~l~sl~~~~~~~~--~iiivdd~s~~~~------------------------------------- 40 (166)
T cd04186 1 IIIVNYNSL-EYLKACLDSLLAQTYPDF--EVIVVDNASTDGS------------------------------------- 40 (166)
T ss_pred CEEEecCCH-HHHHHHHHHHHhccCCCe--EEEEEECCCCchH-------------------------------------
Confidence 699999985 599999999999998777 9999999998872
Q ss_pred hhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhcCCCEEEEEcCCcc
Q psy1765 136 KYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLVFLDSHIE 215 (867)
Q Consensus 136 ~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A~Gd~llfLDaD~~ 215 (867)
.+.+.++ . ++++++..+++.|++.|+|.|++.|++++++|+|+|+.
T Consensus 41 -----------------------------~~~~~~~---~--~~~~~~~~~~~~g~~~a~n~~~~~~~~~~i~~~D~D~~ 86 (166)
T cd04186 41 -----------------------------VELLREL---F--PEVRLIRNGENLGFGAGNNQGIREAKGDYVLLLNPDTV 86 (166)
T ss_pred -----------------------------HHHHHHh---C--CCeEEEecCCCcChHHHhhHHHhhCCCCEEEEECCCcE
Confidence 1122221 1 36889999899999999999999999999999999999
Q ss_pred cCccchHHHHHHHHhcCCc-eeeeEEeeecCCCceeccccccccccccccccccccCCcCcCCCCCCCCCcccccccccc
Q psy1765 216 VNTHWLEPLLVPIAERTNT-VTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMAGG 294 (867)
Q Consensus 216 v~p~wLe~Ll~~l~~~~~~-vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~ 294 (867)
+.++|++.+++.+.+.+.. ++++. ..|+
T Consensus 87 ~~~~~l~~~~~~~~~~~~~~~~~~~---------------------------------------------------~~~~ 115 (166)
T cd04186 87 VEPGALLELLDAAEQDPDVGIVGPK---------------------------------------------------VSGA 115 (166)
T ss_pred ECccHHHHHHHHHHhCCCceEEEcc---------------------------------------------------Ccee
Confidence 9999999999988776543 33221 4578
Q ss_pred eEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEcccEEEEE
Q psy1765 295 LFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGHV 345 (867)
Q Consensus 295 ~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V~H~ 345 (867)
+++++|++|+++|+||+.+.. ++||.||+.|+.+.|+++.++|++.++|.
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~-~~eD~~~~~~~~~~g~~i~~~~~~~~~h~ 165 (166)
T cd04186 116 FLLVRREVFEEVGGFDEDFFL-YYEDVDLCLRARLAGYRVLYVPQAVIYHH 165 (166)
T ss_pred eEeeeHHHHHHcCCCChhhhc-cccHHHHHHHHHHcCCeEEEccceEEEec
Confidence 899999999999999999877 48999999999999999999999999995
|
GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. |
| >cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.8e-23 Score=218.28 Aligned_cols=202 Identities=22% Similarity=0.221 Sum_probs=143.3
Q ss_pred EEEEeCCCChHHHHHHHHHHHhcCc-cccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHHHhhhh
Q psy1765 56 VIICFYNEHPATLYRSVQTLLSRTG-QSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRARMFG 134 (867)
Q Consensus 56 VIIp~yNe~~~~l~~~l~Svl~qt~-~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~a~~~g 134 (867)
||||+||++. .|.++|+||++|++ ..+ |||||||+|+|++
T Consensus 1 ViIp~yn~~~-~l~~~l~sl~~q~~~~~~--eiiiVDd~S~d~t------------------------------------ 41 (224)
T cd06442 1 IIIPTYNERE-NIPELIERLDAALKGIDY--EIIVVDDNSPDGT------------------------------------ 41 (224)
T ss_pred CeEeccchhh-hHHHHHHHHHHhhcCCCe--EEEEEeCCCCCCh------------------------------------
Confidence 7999999775 89999999999997 566 9999999998873
Q ss_pred hhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhcCCCEEEEEcCCc
Q psy1765 135 AKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLVFLDSHI 214 (867)
Q Consensus 135 ~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A~Gd~llfLDaD~ 214 (867)
.+.+.++.+.. +.+++++.++|.|++.|+|.|++.|+||||+|||+|+
T Consensus 42 ------------------------------~~~~~~~~~~~--~~i~~~~~~~n~G~~~a~n~g~~~a~gd~i~~lD~D~ 89 (224)
T cd06442 42 ------------------------------AEIVRELAKEY--PRVRLIVRPGKRGLGSAYIEGFKAARGDVIVVMDADL 89 (224)
T ss_pred ------------------------------HHHHHHHHHhC--CceEEEecCCCCChHHHHHHHHHHcCCCEEEEEECCC
Confidence 33455555554 6789999999999999999999999999999999999
Q ss_pred ccCccchHHHHHHHHhcCCceeeeEEeeecCCCceeccccccccccccccccccccCCcCcCCCCCCCCCcccccccccc
Q psy1765 215 EVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMAGG 294 (867)
Q Consensus 215 ~v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~ 294 (867)
.++|+||+.+++.+..++..+|++..... ..... .|.....+............ .........|+
T Consensus 90 ~~~~~~l~~l~~~~~~~~~~~v~g~~~~~-~~~~~-----------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 154 (224)
T cd06442 90 SHPPEYIPELLEAQLEGGADLVIGSRYVE-GGGVE-----------GWGLKRKLISRGANLLARLL---LGRKVSDPTSG 154 (224)
T ss_pred CCCHHHHHHHHHHHhcCCCCEEEEeeeec-CCccC-----------CCcHHHHHHHHHHHHHHHHH---cCCCCCCCCCc
Confidence 99999999999997665555544332111 11110 01100000000000000000 00123345678
Q ss_pred eEeEeHHHHHHhC-CCCCCCCCCcccchHHHHHHHHcCCeEEEEcccEEEEEe
Q psy1765 295 LFAIDRQYFDSLG-QYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGHVF 346 (867)
Q Consensus 295 ~~airR~~f~~vG-gfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V~H~~ 346 (867)
+++++|++|+++| ++++..+ .+|+||++|++++|+++.++|...+.|..
T Consensus 155 ~~~~~r~~~~~ig~~~~~~~~---~~~~~l~~~~~~~g~~i~~~p~~~~~~~~ 204 (224)
T cd06442 155 FRAYRREVLEKLIDSLVSKGY---KFQLELLVRARRLGYRIVEVPITFVDREH 204 (224)
T ss_pred cchhhHHHHHHHhhhccCCCc---EEeHHHHHHHHHcCCeEEEeCeEEeccCC
Confidence 8999999999998 4444321 45899999999999999999988877754
|
Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, |
| >PRK10073 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-22 Score=225.26 Aligned_cols=208 Identities=22% Similarity=0.195 Sum_probs=143.2
Q ss_pred CCCcEEEEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHH
Q psy1765 50 TLPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIR 129 (867)
Q Consensus 50 ~~P~vSVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~ 129 (867)
.+|+||||||+||++ +.|.+||+||++|+++++ |||||||||+|+|
T Consensus 4 ~~p~vSVIIP~yN~~-~~L~~~l~Sl~~Qt~~~~--EIIiVdDgStD~t------------------------------- 49 (328)
T PRK10073 4 STPKLSIIIPLYNAG-KDFRAFMESLIAQTWTAL--EIIIVNDGSTDNS------------------------------- 49 (328)
T ss_pred CCCeEEEEEeccCCH-HHHHHHHHHHHhCCCCCe--EEEEEeCCCCccH-------------------------------
Confidence 358999999999976 499999999999999998 9999999999983
Q ss_pred HhhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhcCCCEEEE
Q psy1765 130 ARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLVF 209 (867)
Q Consensus 130 a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A~Gd~llf 209 (867)
.+.+.++.+.. +++++++.+ |.|++.|||.|++.|+||||+|
T Consensus 50 -----------------------------------~~i~~~~~~~~--~~i~vi~~~-n~G~~~arN~gl~~a~g~yi~f 91 (328)
T PRK10073 50 -----------------------------------VEIAKHYAENY--PHVRLLHQA-NAGVSVARNTGLAVATGKYVAF 91 (328)
T ss_pred -----------------------------------HHHHHHHHhhC--CCEEEEECC-CCChHHHHHHHHHhCCCCEEEE
Confidence 34566666555 789999865 9999999999999999999999
Q ss_pred EcCCcccCccchHHHHHHHHhcCCceeeeEEeeecCCCceeccc-cccc-cccccccccccccCCcCcCCCCCCCCCccc
Q psy1765 210 LDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSS-ALVR-GGFNWGLHFKWENLPKGTLNSSEDFIKPIL 287 (867)
Q Consensus 210 LDaD~~v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~~~~~~~~-~~~~-g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~ 287 (867)
+|+|+.+.|++++.+++.+.+++..++......+..+.-..... +... +.........|.. .... ...+
T Consensus 92 lD~DD~~~p~~l~~l~~~~~~~~~dvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~l~-----~~~~- 162 (328)
T PRK10073 92 PDADDVVYPTMYETLMTMALEDDLDVAQCNADWCFRDTGETWQSIPSDRLRSTGVLSGPDWLR---MALS-----SRRW- 162 (328)
T ss_pred ECCCCccChhHHHHHHHHHHhCCCCEEEEccEEEEeCCCccccccccccccccceechHHHHH---HHHh-----hCCC-
Confidence 99999999999999999987766555432221111111000000 0000 0000000000000 0000 0000
Q ss_pred ccccccceEeEeHHHHHHhC-CCCCCCCCCcccchHHHHHHHHcCCeEEEEcccEEE
Q psy1765 288 SPTMAGGLFAIDRQYFDSLG-QYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIG 343 (867)
Q Consensus 288 ~~~~~G~~~airR~~f~~vG-gfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V~ 343 (867)
.. ...+-++||+++++.| .|++++. +||+++.+++...+.++.++|.....
T Consensus 163 -~~-~~~~~l~Rr~~l~~~~~~f~~~~~---~eD~~~~~~~~~~~~~v~~~~~~ly~ 214 (328)
T PRK10073 163 -TH-VVWLGVYRRDFIVKNNIKFEPGLH---HQDIPWTTEVMFNALRVRYTEQSLYK 214 (328)
T ss_pred -Cc-cHhHHHHHHHHHHHcCCccCCCCE---eccHHHHHHHHHHCCEEEEECCCEEE
Confidence 00 1123478999999988 4777663 69999999999999999999975443
|
|
| >PLN02726 dolichyl-phosphate beta-D-mannosyltransferase | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.8e-23 Score=217.80 Aligned_cols=212 Identities=18% Similarity=0.176 Sum_probs=148.7
Q ss_pred CCCCcEEEEEEeCCCChHHHHHHHHHHHhc--CccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchh
Q psy1765 49 STLPSTSVIICFYNEHPATLYRSVQTLLSR--TGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREG 126 (867)
Q Consensus 49 ~~~P~vSVIIp~yNe~~~~l~~~l~Svl~q--t~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g 126 (867)
..+|+||||||+|||+. .|..+++++.++ +++++ |||||||||+|++
T Consensus 6 ~~~~~vsVvIp~yne~~-~l~~~l~~l~~~~~~~~~~--eiivvDdgS~D~t---------------------------- 54 (243)
T PLN02726 6 EGAMKYSIIVPTYNERL-NIALIVYLIFKALQDVKDF--EIIVVDDGSPDGT---------------------------- 54 (243)
T ss_pred CCCceEEEEEccCCchh-hHHHHHHHHHHHhccCCCe--EEEEEeCCCCCCH----------------------------
Confidence 35689999999999876 899999988764 34455 9999999998873
Q ss_pred hHHHhhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhcCCCE
Q psy1765 127 LIRARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKV 206 (867)
Q Consensus 127 i~~a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A~Gd~ 206 (867)
.+.+.++.+......++++..++|.|++.|+|.|++.|+|||
T Consensus 55 --------------------------------------~~i~~~~~~~~~~~~v~~~~~~~n~G~~~a~n~g~~~a~g~~ 96 (243)
T PLN02726 55 --------------------------------------QDVVKQLQKVYGEDRILLRPRPGKLGLGTAYIHGLKHASGDF 96 (243)
T ss_pred --------------------------------------HHHHHHHHHhcCCCcEEEEecCCCCCHHHHHHHHHHHcCCCE
Confidence 334444444443357889998999999999999999999999
Q ss_pred EEEEcCCcccCccchHHHHHHHHhcCCceeeeEEeeecCCCceeccccccccccccccccccccCCcCcCCCCCCCCCcc
Q psy1765 207 LVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPI 286 (867)
Q Consensus 207 llfLDaD~~v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~ 286 (867)
|+|+|+|+.++|+||+.+++.+.++..++|.+.....++. .. .....+..... .+.+. .... ...
T Consensus 97 i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~g~r~~~~~~-~~--~~~~~r~~~~~--~~~~~---~~~~-------~~~ 161 (243)
T PLN02726 97 VVIMDADLSHHPKYLPSFIKKQRETGADIVTGTRYVKGGG-VH--GWDLRRKLTSR--GANVL---AQTL-------LWP 161 (243)
T ss_pred EEEEcCCCCCCHHHHHHHHHHHHhcCCcEEEEccccCCCC-cC--CccHHHHHHHH--HHHHH---HHHH-------hCC
Confidence 9999999999999999999999876666665533111110 00 00000000000 00000 0000 001
Q ss_pred cccccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEcccEEEEEe
Q psy1765 287 LSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGHVF 346 (867)
Q Consensus 287 ~~~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V~H~~ 346 (867)
......|+++++||++|++++.+.+... | .+|+||++|+..+|+++..+|...+.|..
T Consensus 162 ~~~d~~g~~~~~rr~~~~~i~~~~~~~~-~-~~~~el~~~~~~~g~~i~~vp~~~~~r~~ 219 (243)
T PLN02726 162 GVSDLTGSFRLYKRSALEDLVSSVVSKG-Y-VFQMEIIVRASRKGYRIEEVPITFVDRVY 219 (243)
T ss_pred CCCcCCCcccceeHHHHHHHHhhccCCC-c-EEehHHHHHHHHcCCcEEEeCcEEeCCCC
Confidence 2334568899999999999987665432 2 57899999999999999999988777654
|
|
| >cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.4e-23 Score=217.14 Aligned_cols=205 Identities=22% Similarity=0.251 Sum_probs=151.8
Q ss_pred CCCCcEEEEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhH
Q psy1765 49 STLPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLI 128 (867)
Q Consensus 49 ~~~P~vSVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 128 (867)
..+|++|||||+||++. .|.+||+|+++|+++....|||||||+|+|++
T Consensus 26 ~~~~~isVvip~~n~~~-~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t------------------------------ 74 (251)
T cd06439 26 AYLPTVTIIIPAYNEEA-VIEAKLENLLALDYPRDRLEIIVVSDGSTDGT------------------------------ 74 (251)
T ss_pred CCCCEEEEEEecCCcHH-HHHHHHHHHHhCcCCCCcEEEEEEECCCCccH------------------------------
Confidence 56789999999999775 99999999999998873239999999999872
Q ss_pred HHhhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhcCCCEEE
Q psy1765 129 RARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLV 208 (867)
Q Consensus 129 ~a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A~Gd~ll 208 (867)
.+.+.++.. .+++++..++|.|.+.|+|.|++.|+||||+
T Consensus 75 ------------------------------------~~~~~~~~~----~~v~~i~~~~~~g~~~a~n~gi~~a~~d~i~ 114 (251)
T cd06439 75 ------------------------------------AEIAREYAD----KGVKLLRFPERRGKAAALNRALALATGEIVV 114 (251)
T ss_pred ------------------------------------HHHHHHHhh----CcEEEEEcCCCCChHHHHHHHHHHcCCCEEE
Confidence 223333322 1689999999999999999999999999999
Q ss_pred EEcCCcccCccchHHHHHHHHhcCCceeeeEEeeecCCCceeccccccccccccccccccccCCcCcCCCCCCCCCcccc
Q psy1765 209 FLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILS 288 (867)
Q Consensus 209 fLDaD~~v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~ 288 (867)
|+|+|+.++|+||+.+++.+..+..+++++.....+++. ... ...+.|.+....... .. .....
T Consensus 115 ~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~--~~~----~~~~~~~~~~~~~~~-----~~-----~~~~~ 178 (251)
T cd06439 115 FTDANALLDPDALRLLVRHFADPSVGAVSGELVIVDGGG--SGS----GEGLYWKYENWLKRA-----ES-----RLGST 178 (251)
T ss_pred EEccccCcCHHHHHHHHHHhcCCCccEEEeEEEecCCcc--cch----hHHHHHHHHHHHHHH-----HH-----hcCCe
Confidence 999999999999999999997666677777665544432 000 000101110000000 00 00123
Q ss_pred cccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEcccEEEEEe
Q psy1765 289 PTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGHVF 346 (867)
Q Consensus 289 ~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V~H~~ 346 (867)
....|++++++|++|+ +|++.. ..||.+++.|+...|+++.++|.+.++|..
T Consensus 179 ~~~~g~~~~~rr~~~~---~~~~~~---~~eD~~l~~~~~~~G~~~~~~~~~~~~~~~ 230 (251)
T cd06439 179 VGANGAIYAIRRELFR---PLPADT---INDDFVLPLRIARQGYRVVYEPDAVAYEEV 230 (251)
T ss_pred eeecchHHHhHHHHhc---CCCccc---chhHHHHHHHHHHcCCeEEeccccEEEEeC
Confidence 4567888899999998 666543 379999999999999999999999998865
|
This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. |
| >PRK11498 bcsA cellulose synthase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.4e-22 Score=241.81 Aligned_cols=205 Identities=16% Similarity=0.166 Sum_probs=146.9
Q ss_pred CCCCcEEEEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhH
Q psy1765 49 STLPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLI 128 (867)
Q Consensus 49 ~~~P~vSVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 128 (867)
+..|+||||||+|||+.+.+.++|.++++++||.-..|||||||||+|++
T Consensus 257 ~~~P~VsViIPtYNE~~~vv~~tI~a~l~~dYP~~k~EViVVDDgS~D~t------------------------------ 306 (852)
T PRK11498 257 SLWPTVDIFVPTYNEDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEF------------------------------ 306 (852)
T ss_pred CCCCcEEEEEecCCCcHHHHHHHHHHHHhccCCCCceEEEEEeCCCChHH------------------------------
Confidence 35689999999999987778899999999999863339999999998872
Q ss_pred HHhhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCC-cCchhHHhHhhhhcCCCEE
Q psy1765 129 RARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKR-EGLIRARMFGAKYATGKVL 207 (867)
Q Consensus 129 ~a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n-~G~a~ArN~G~~~A~Gd~l 207 (867)
.+++++. ++++++.++| .|.++++|.|+++++||||
T Consensus 307 ----------------------------------------~~la~~~---~v~yI~R~~n~~gKAGnLN~aL~~a~GEyI 343 (852)
T PRK11498 307 ----------------------------------------RQFAQEV---GVKYIARPTHEHAKAGNINNALKYAKGEFV 343 (852)
T ss_pred ----------------------------------------HHHHHHC---CcEEEEeCCCCcchHHHHHHHHHhCCCCEE
Confidence 2223332 6888877654 4679999999999999999
Q ss_pred EEEcCCcccCccchHHHHHHHHhcCC-ceeeeEEeeecCCCceecccccccccccc-----ccccccccCCcCcCCCCCC
Q psy1765 208 VFLDSHIEVNTHWLEPLLVPIAERTN-TVTVPIIDIINADTFQYTSSALVRGGFNW-----GLHFKWENLPKGTLNSSED 281 (867)
Q Consensus 208 lfLDaD~~v~p~wLe~Ll~~l~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~g~f~~-----~l~~~~~~~~~~~~~~~~~ 281 (867)
+++|+|+++.+++|+.++..+.+++. ++|.+.....+.+.++.. .+.+.. ...+.. .. .
T Consensus 344 avlDAD~ip~pdfL~~~V~~f~~dP~VglVQtp~~f~n~dp~~rn-----l~~~~~~~~e~~~fy~~-------iq---~ 408 (852)
T PRK11498 344 AIFDCDHVPTRSFLQMTMGWFLKDKKLAMMQTPHHFFSPDPFERN-----LGRFRKTPNEGTLFYGL-------VQ---D 408 (852)
T ss_pred EEECCCCCCChHHHHHHHHHHHhCCCeEEEEcceeccCCchHHHh-----hHHHhhcccchhHHHHH-------HH---h
Confidence 99999999999999999999877765 444332222222221110 000000 000000 00 0
Q ss_pred CCCcccccccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEcccEEEE
Q psy1765 282 FIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGH 344 (867)
Q Consensus 282 ~~~p~~~~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V~H 344 (867)
.........++|+++++||++|+++||||++.. .||+|+++|+..+||++.|+|...+..
T Consensus 409 g~~~~~a~~~~Gs~aviRReaLeeVGGfd~~ti---tED~dlslRL~~~Gyrv~yl~~~~a~g 468 (852)
T PRK11498 409 GNDMWDATFFCGSCAVIRRKPLDEIGGIAVETV---TEDAHTSLRLHRRGYTSAYMRIPQAAG 468 (852)
T ss_pred HHHhhcccccccceeeeEHHHHHHhcCCCCCcc---CccHHHHHHHHHcCCEEEEEeccceeE
Confidence 001112345679999999999999999999752 799999999999999999998766653
|
|
| >cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.8e-22 Score=208.90 Aligned_cols=185 Identities=20% Similarity=0.200 Sum_probs=132.5
Q ss_pred EEEEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHHHhhh
Q psy1765 54 TSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRARMF 133 (867)
Q Consensus 54 vSVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~a~~~ 133 (867)
||||||+||++. .|.+||+||++|+++.+ |||||||+|+|++
T Consensus 1 vsvii~~~n~~~-~l~~~l~sl~~q~~~~~--evivvdd~s~d~~----------------------------------- 42 (221)
T cd02522 1 LSIIIPTLNEAE-NLPRLLASLRRLNPLPL--EIIVVDGGSTDGT----------------------------------- 42 (221)
T ss_pred CEEEEEccCcHH-HHHHHHHHHHhccCCCc--EEEEEeCCCCccH-----------------------------------
Confidence 699999999876 99999999999998777 9999999998882
Q ss_pred hhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhcCCCEEEEEcCC
Q psy1765 134 GAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLVFLDSH 213 (867)
Q Consensus 134 g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A~Gd~llfLDaD 213 (867)
. +.+++ ..++++.. +.|.+.|+|.|+..|+|++|+|+|+|
T Consensus 43 -------------------------------~----~~~~~---~~~~~~~~--~~g~~~a~n~g~~~a~~~~i~~~D~D 82 (221)
T cd02522 43 -------------------------------V----AIARS---AGVVVISS--PKGRARQMNAGAAAARGDWLLFLHAD 82 (221)
T ss_pred -------------------------------H----HHHhc---CCeEEEeC--CcCHHHHHHHHHHhccCCEEEEEcCC
Confidence 1 11111 35666654 57899999999999999999999999
Q ss_pred cccCccchHHHHHHHHhcCCceeeeEEeeecCCCceeccccccccccccccccccccCCcCcCCCCCCCCCccccccccc
Q psy1765 214 IEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMAG 293 (867)
Q Consensus 214 ~~v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~G 293 (867)
+.++++||+.++..+......++++.....+.. ..+.. ....+.... ..... ...+
T Consensus 83 ~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~-----------------~~~~~-~~~~ 138 (221)
T cd02522 83 TRLPPDWDAAIIETLRADGAVAGAFRLRFDDPG-PRLRL-----LELGANLRS-----------------RLFGL-PYGD 138 (221)
T ss_pred CCCChhHHHHHHHHhhcCCcEEEEEEeeecCCc-cchhh-----hhhccccee-----------------cccCC-CcCC
Confidence 999999999998877665544433333221111 11000 000000000 00011 1234
Q ss_pred ceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEcccEEEE
Q psy1765 294 GLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGH 344 (867)
Q Consensus 294 ~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V~H 344 (867)
.+++++|++|+++||||+.+ ++||+||++|++++|+++.+ |...+.+
T Consensus 139 ~~~~~r~~~~~~~G~fd~~~---~~ED~d~~~r~~~~G~~~~~-~~~~~~~ 185 (221)
T cd02522 139 QGLFIRRELFEELGGFPELP---LMEDVELVRRLRRRGRPALL-PSPVTTS 185 (221)
T ss_pred ceEEEEHHHHHHhCCCCccc---cccHHHHHHHHHhCCCEEEc-Cceeeec
Confidence 57899999999999999988 38999999999999999877 6555443
|
Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. |
| >cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.2e-22 Score=205.22 Aligned_cols=201 Identities=16% Similarity=0.183 Sum_probs=144.9
Q ss_pred EEEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHHHhhhh
Q psy1765 55 SVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRARMFG 134 (867)
Q Consensus 55 SVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~a~~~g 134 (867)
|||||+||++. .|.+||+||++|+++.+ |||||||||+|++
T Consensus 1 sIvIp~yn~~~-~l~~~l~sl~~q~~~~~--eiiVvddgS~d~t------------------------------------ 41 (214)
T cd04196 1 AVLMATYNGEK-YLREQLDSILAQTYKND--ELIISDDGSTDGT------------------------------------ 41 (214)
T ss_pred CEEEEecCcHH-HHHHHHHHHHhCcCCCe--EEEEEeCCCCCCc------------------------------------
Confidence 79999999875 99999999999999887 9999999999883
Q ss_pred hhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhcCCCEEEEEcCCc
Q psy1765 135 AKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLVFLDSHI 214 (867)
Q Consensus 135 ~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A~Gd~llfLDaD~ 214 (867)
.+.+.++..+. +..++++..++|.|.++++|.|+..|+||||+|+|+|+
T Consensus 42 ------------------------------~~~~~~~~~~~-~~~~~~~~~~~~~G~~~~~n~g~~~~~g~~v~~ld~Dd 90 (214)
T cd04196 42 ------------------------------VEIIKEYIDKD-PFIIILIRNGKNLGVARNFESLLQAADGDYVFFCDQDD 90 (214)
T ss_pred ------------------------------HHHHHHHHhcC-CceEEEEeCCCCccHHHHHHHHHHhCCCCEEEEECCCc
Confidence 33455555444 24688899999999999999999999999999999999
Q ss_pred ccCccchHHHHHHHHhcCC-ceeeeEEeeecCCCceeccccccccccccccccccccCCcCcCCCCCCCCCccccccccc
Q psy1765 215 EVNTHWLEPLLVPIAERTN-TVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMAG 293 (867)
Q Consensus 215 ~v~p~wLe~Ll~~l~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~G 293 (867)
.+.|++|+.+++.+.+++. .++++.....+.+....... + ........ ............+.|
T Consensus 91 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-----~~~~~~~~-----~~~~~~~~~~~~~~~ 154 (214)
T cd04196 91 IWLPDKLERLLKAFLKDDKPLLVYSDLELVDENGNPIGES------F-----FEYQKIKP-----GTSFNNLLFQNVVTG 154 (214)
T ss_pred ccChhHHHHHHHHHhcCCCceEEecCcEEECCCCCCcccc------c-----ccccccCC-----ccCHHHHHHhCccCC
Confidence 9999999999999666554 34443322222221100000 0 00000000 000001112345568
Q ss_pred ceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEcccEEEE
Q psy1765 294 GLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGH 344 (867)
Q Consensus 294 ~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V~H 344 (867)
++++++|++++++|+|++.+. .+||.++.+++.. |+++.++|...+.|
T Consensus 155 ~~~~~r~~~~~~~~~~~~~~~--~~~D~~~~~~~~~-~~~~~~~~~~~~~~ 202 (214)
T cd04196 155 CTMAFNRELLELALPFPDADV--IMHDWWLALLASA-FGKVVFLDEPLILY 202 (214)
T ss_pred ceeeEEHHHHHhhcccccccc--ccchHHHHHHHHH-cCceEEcchhHHHH
Confidence 889999999999999999752 2799999998877 77999999776643
|
GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. |
| >cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan | Back alignment and domain information |
|---|
Probab=99.87 E-value=3e-22 Score=210.82 Aligned_cols=205 Identities=17% Similarity=0.161 Sum_probs=143.8
Q ss_pred cEEEEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHHHhh
Q psy1765 53 STSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRARM 132 (867)
Q Consensus 53 ~vSVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~a~~ 132 (867)
+||||||+|||+...|.+||+|+++|+ .+ |||||||+|+|++
T Consensus 1 ~isVvIp~~ne~~~~l~~~l~sl~~q~--~~--eiivvdd~s~d~~---------------------------------- 42 (235)
T cd06434 1 DVTVIIPVYDEDPDVFRECLRSILRQK--PL--EIIVVTDGDDEPY---------------------------------- 42 (235)
T ss_pred CeEEEEeecCCChHHHHHHHHHHHhCC--CC--EEEEEeCCCChHH----------------------------------
Confidence 489999999988459999999999998 34 9999999999882
Q ss_pred hhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhcCCCEEEEEcC
Q psy1765 133 FGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLVFLDS 212 (867)
Q Consensus 133 ~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A~Gd~llfLDa 212 (867)
.+.+.+ ... .+.++++.. ++.|.+.|+|.|++.|+||||+|+|+
T Consensus 43 --------------------------------~~~l~~-~~~--~~~~~v~~~-~~~g~~~a~n~g~~~a~~d~v~~lD~ 86 (235)
T cd06434 43 --------------------------------LSILSQ-TVK--YGGIFVITV-PHPGKRRALAEGIRHVTTDIVVLLDS 86 (235)
T ss_pred --------------------------------HHHHHh-hcc--CCcEEEEec-CCCChHHHHHHHHHHhCCCEEEEECC
Confidence 111211 111 256777764 48999999999999999999999999
Q ss_pred CcccCccchHHHHHHHHhcCCceeeeEEeeecCCCceeccccccccccccccccccccCCcCcCCCCCCCCCcccccccc
Q psy1765 213 HIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMA 292 (867)
Q Consensus 213 D~~v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 292 (867)
|+.++|+||+.+++.+..+..++|++.+...+.....+. .....+-+..... .... .. .....+.+.
T Consensus 87 D~~~~~~~l~~l~~~~~~~~v~~v~~~~~~~~~~~~~~~---~~~~~~~~~~~~~------~~~~--~~--~~~~~~~~~ 153 (235)
T cd06434 87 DTVWPPNALPEMLKPFEDPKVGGVGTNQRILRPRDSKWS---FLAAEYLERRNEE------IRAA--MS--YDGGVPCLS 153 (235)
T ss_pred CceeChhHHHHHHHhccCCCEeEEcCceEeecCcccHHH---HHHHHHHHHHHHH------HHHH--Hh--hCCCEEEcc
Confidence 999999999999999985455677765544433110000 0000000000000 0000 00 001235677
Q ss_pred cceEeEeHHHHHHhCCCCCCC--------CCCcccchHHHHHHHHcCCeEEEEcccEEEEE
Q psy1765 293 GGLFAIDRQYFDSLGQYDAGL--------EIWGGENLELSFRIWMCGGSLAMIPCSRIGHV 345 (867)
Q Consensus 293 G~~~airR~~f~~vGgfDe~~--------~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V~H~ 345 (867)
|+++++||++++++++ ++.+ ....+||.+|+.|+.+.|+++.+.|.+.++|.
T Consensus 154 G~~~~~rr~~l~~~~~-~~~~~~~~~~~~~~~~~eD~~l~~~~~~~g~~~~~~~~~~~~~~ 213 (235)
T cd06434 154 GRTAAYRTEILKDFLF-LEEFTNETFMGRRLNAGDDRFLTRYVLSHGYKTVYQYTSEAYTE 213 (235)
T ss_pred CcHHHHHHHHHhhhhh-HHHhhhhhhcCCCCCcCchHHHHHHHHHCCCeEEEecCCeEEEE
Confidence 8899999999999754 4433 22348999999999999999999999999986
|
Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate. |
| >PRK10063 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=5e-21 Score=203.95 Aligned_cols=192 Identities=15% Similarity=0.091 Sum_probs=131.3
Q ss_pred CcEEEEEEeCCCChHHHHHHHHHHHhc---CccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhH
Q psy1765 52 PSTSVIICFYNEHPATLYRSVQTLLSR---TGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLI 128 (867)
Q Consensus 52 P~vSVIIp~yNe~~~~l~~~l~Svl~q---t~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 128 (867)
|+||||||+||++. .|.+||+||+++ +++++ |||||||||+|++
T Consensus 1 ~~vSVIi~~yN~~~-~l~~~l~sl~~~~~~~~~~~--EiIVvDdgStD~t------------------------------ 47 (248)
T PRK10063 1 MLLSVITVAFRNLE-GIVKTHASLRHLAQDPGISF--EWIVVDGGSNDGT------------------------------ 47 (248)
T ss_pred CeEEEEEEeCCCHH-HHHHHHHHHHHHHhCCCCCE--EEEEEECcCcccH------------------------------
Confidence 68999999999766 999999999853 45677 9999999999883
Q ss_pred HHhhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhcCCCEEE
Q psy1765 129 RARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLV 208 (867)
Q Consensus 129 ~a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A~Gd~ll 208 (867)
.+.+.++... .+++++..+ +.|+++|+|.|++.|+||||+
T Consensus 48 ------------------------------------~~i~~~~~~~---~~i~~i~~~-~~G~~~A~N~Gi~~a~g~~v~ 87 (248)
T PRK10063 48 ------------------------------------REFLENLNGI---FNLRFVSEP-DNGIYDAMNKGIAMAQGRFAL 87 (248)
T ss_pred ------------------------------------HHHHHHhccc---CCEEEEECC-CCCHHHHHHHHHHHcCCCEEE
Confidence 2334443221 358888876 779999999999999999999
Q ss_pred EEcCCcccCccchHHHHHHHHhcCCceeeeEEeeecCCCceeccccccccccccccccccccCCcCcCCCCCCCCCcccc
Q psy1765 209 FLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILS 288 (867)
Q Consensus 209 fLDaD~~v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~ 288 (867)
|||+|+.+.|+.++.+......++..++++......++.... .+.. .+.. . .....
T Consensus 88 ~ld~DD~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~~~~~-----~~~~-----------~~~~-~-------~~~~~ 143 (248)
T PRK10063 88 FLNSGDIFHQDAANFVRQLKMQKDNAMIIGDALLDFGDGHKI-----KRSA-----------KPGW-Y-------IYHSL 143 (248)
T ss_pred EEeCCcccCcCHHHHHHHHHhCCCCeEEEeeeEEEcCCCcEE-----EEcc-----------CChh-H-------HhcCC
Confidence 999999999988765444333434444443321111111000 0000 0000 0 00001
Q ss_pred cccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEcccEEEE
Q psy1765 289 PTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGH 344 (867)
Q Consensus 289 ~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V~H 344 (867)
.+.+..++++|+.|.. |+||+.+.. .||+||.+|++..|+++.++|...+.+
T Consensus 144 -~~~~~~~~~~~~~~~~-~~fd~~~~~--~~Dydl~lrl~~~g~~~~~v~~~l~~y 195 (248)
T PRK10063 144 -PASHQAIFFPVSGLKK-WRYDLQYKV--SSDYALAARLYKAGYAFKKLNGLVSEF 195 (248)
T ss_pred -CCCCcEEEEEHHHHhc-CCCCcccch--HHhHHHHHHHHHcCCcEEEcCceeEEE
Confidence 1223456789998874 889998754 699999999999999999999766553
|
|
| >TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming) | Back alignment and domain information |
|---|
Probab=99.87 E-value=9.7e-22 Score=238.25 Aligned_cols=228 Identities=14% Similarity=0.155 Sum_probs=151.9
Q ss_pred CCCCCcEEEEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCc-hhhHHHHHhhcCCCceEEEEeccchh
Q psy1765 48 PSTLPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNL-HGEVETFVKGLNDGRVHLYRTSKREG 126 (867)
Q Consensus 48 ~~~~P~vSVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~g 126 (867)
++..|+||||||+|||+.+.+.+||.|+++++||.-..|||||||||+|++.- .+++ +.
T Consensus 127 ~~~~P~VsViIP~yNE~~~iv~~tl~s~~~~dYP~~~~eIiVvDDgStD~t~~~~~~~---~~----------------- 186 (713)
T TIGR03030 127 PEEWPTVDVFIPTYNEDLEIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRNDPDPE---QA----------------- 186 (713)
T ss_pred cccCCeeEEEEcCCCCCHHHHHHHHHHHHhCCCCccceEEEEEECcCCccccccchhh---hh-----------------
Confidence 35679999999999999867788999999999984223999999999998300 0000 00
Q ss_pred hHHHhhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCc-CchhHHhHhhhhcCCC
Q psy1765 127 LIRARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKRE-GLIRARMFGAKYATGK 205 (867)
Q Consensus 127 i~~a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~-G~a~ArN~G~~~A~Gd 205 (867)
+++ ...+.+.++.++ .++++++.++|. +.++++|.|+++++||
T Consensus 187 ---------~~~------------------------~~~~~~~~l~~~---~~v~yi~r~~n~~~KAgnLN~al~~a~gd 230 (713)
T TIGR03030 187 ---------EAA------------------------QRREELKEFCRK---LGVNYITRPRNVHAKAGNINNALKHTDGE 230 (713)
T ss_pred ---------hhh------------------------hhHHHHHHHHHH---cCcEEEECCCCCCCChHHHHHHHHhcCCC
Confidence 000 001234444444 378999877775 5689999999999999
Q ss_pred EEEEEcCCcccCccchHHHHHHHHhcCCc-ee-eeEEeeecCCCceeccccccccccccccccccccCCcCcCCCCCCCC
Q psy1765 206 VLVFLDSHIEVNTHWLEPLLVPIAERTNT-VT-VPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFI 283 (867)
Q Consensus 206 ~llfLDaD~~v~p~wLe~Ll~~l~~~~~~-vv-~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~ 283 (867)
||+++|+|+.++|++|+.++..+.+++.. +| +|.. ..+.+.++................+. . ...+ .
T Consensus 231 ~Il~lDAD~v~~pd~L~~~v~~f~~dp~v~~Vqtp~~-f~~p~~~~~nl~~~~~~~~e~~~f~~-~-i~~g-----~--- 299 (713)
T TIGR03030 231 LILIFDADHVPTRDFLQRTVGWFVEDPKLFLVQTPHF-FVSPDPIERNLGTFRRMPNENELFYG-L-IQDG-----N--- 299 (713)
T ss_pred EEEEECCCCCcChhHHHHHHHHHHhCCCEEEEeCCee-ccCCCHHhhhhHHHHHhhhHHHHHHH-H-HHHH-----H---
Confidence 99999999999999999999999877653 33 2322 12222111100000000000000000 0 0000 0
Q ss_pred CcccccccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEcccEEEEE
Q psy1765 284 KPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGHV 345 (867)
Q Consensus 284 ~p~~~~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V~H~ 345 (867)
.......++|+++++||++|+++||||++.. .||+|+++|+..+|+++.++|.+.+.+.
T Consensus 300 ~~~~~~~~~Gs~~~iRR~al~~iGGf~~~~v---tED~~l~~rL~~~G~~~~y~~~~~~~g~ 358 (713)
T TIGR03030 300 DFWNAAFFCGSAAVLRREALDEIGGIAGETV---TEDAETALKLHRRGWNSAYLDRPLIAGL 358 (713)
T ss_pred hhhCCeeecCceeEEEHHHHHHcCCCCCCCc---CcHHHHHHHHHHcCCeEEEecccccccc
Confidence 0112345678899999999999999998653 7999999999999999999998877653
|
Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils. |
| >PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.8e-20 Score=183.24 Aligned_cols=169 Identities=25% Similarity=0.368 Sum_probs=119.8
Q ss_pred EEEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHHHhhhh
Q psy1765 55 SVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRARMFG 134 (867)
Q Consensus 55 SVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~a~~~g 134 (867)
|||||+||++. .|.+||+||++|+.+.+ |||||||+|+|++
T Consensus 1 Svvip~~n~~~-~l~~~l~sl~~q~~~~~--eiivvdd~s~d~~------------------------------------ 41 (169)
T PF00535_consen 1 SVVIPTYNEAE-YLERTLESLLKQTDPDF--EIIVVDDGSTDET------------------------------------ 41 (169)
T ss_dssp EEEEEESS-TT-THHHHHHHHHHHSGCEE--EEEEEECS-SSSH------------------------------------
T ss_pred CEEEEeeCCHH-HHHHHHHHHhhccCCCE--EEEEecccccccc------------------------------------
Confidence 89999999865 99999999999988887 9999999997762
Q ss_pred hhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhcCCCEEEEEcCCc
Q psy1765 135 AKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLVFLDSHI 214 (867)
Q Consensus 135 ~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A~Gd~llfLDaD~ 214 (867)
.+.+.++.+ ...++++++.++|.|++.++|.|+++|+++|++|+|+|+
T Consensus 42 ------------------------------~~~~~~~~~--~~~~i~~i~~~~n~g~~~~~n~~~~~a~~~~i~~ld~D~ 89 (169)
T PF00535_consen 42 ------------------------------EEILEEYAE--SDPNIRYIRNPENLGFSAARNRGIKHAKGEYILFLDDDD 89 (169)
T ss_dssp ------------------------------HHHHHHHHC--CSTTEEEEEHCCCSHHHHHHHHHHHH--SSEEEEEETTE
T ss_pred ------------------------------ccccccccc--cccccccccccccccccccccccccccceeEEEEeCCCc
Confidence 345555554 237999999999999999999999999999999999999
Q ss_pred ccCccchHHHHHHHHhcCCceeeeEEeeecCCCceeccccccccccccccccccccCCcCcCCCCCCCCCcccccccccc
Q psy1765 215 EVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMAGG 294 (867)
Q Consensus 215 ~v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~ 294 (867)
++.++||+.+++.+.+.+..++.+.................. .. +....... ............+++
T Consensus 90 ~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~----------~~~~~~~~~~~~~~~ 156 (169)
T PF00535_consen 90 IISPDWLEELVEALEKNPPDVVIGSVIYIDDDNRYPDRRLRF--SF-WNRFERKI----------FNNIRFWKISFFIGS 156 (169)
T ss_dssp EE-TTHHHHHHHHHHHCTTEEEEEEEEEEECTTETEECCCTS--EE-EECCHCHH----------HHTTHSTTSSEESSS
T ss_pred eEcHHHHHHHHHHHHhCCCcEEEEEEEEecCCccccccccch--hh-hhhhhhHH----------HHhhhcCCccccccc
Confidence 999999999999999977766655554443332222111000 00 00000000 001112345677889
Q ss_pred eEeEeHHHHHHhC
Q psy1765 295 LFAIDRQYFDSLG 307 (867)
Q Consensus 295 ~~airR~~f~~vG 307 (867)
++++||++|+++|
T Consensus 157 ~~~~rr~~~~~~~ 169 (169)
T PF00535_consen 157 CALFRRSVFEEIG 169 (169)
T ss_dssp CEEEEEHHHHHCH
T ss_pred EEEEEHHHHHhhC
Confidence 9999999999986
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A .... |
| >COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.3e-20 Score=212.39 Aligned_cols=235 Identities=23% Similarity=0.243 Sum_probs=165.0
Q ss_pred CCcEEEEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHHH
Q psy1765 51 LPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRA 130 (867)
Q Consensus 51 ~P~vSVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~a 130 (867)
+|+||||||+|||+...+.+++.|+++|+||.+ |||||||+|+|++
T Consensus 53 ~p~vsviiP~ynE~~~~~~~~l~s~~~~dyp~~--evivv~d~~~d~~-------------------------------- 98 (439)
T COG1215 53 LPKVSVIIPAYNEEPEVLEETLESLLSQDYPRY--EVIVVDDGSTDET-------------------------------- 98 (439)
T ss_pred CCceEEEEecCCCchhhHHHHHHHHHhCCCCCc--eEEEECCCCChhH--------------------------------
Confidence 599999999999998899999999999999998 9999999999882
Q ss_pred hhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEc-CCCcCchhHHhHhhhhcCCCEEEE
Q psy1765 131 RMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRT-SKREGLIRARMFGAKYATGKVLVF 209 (867)
Q Consensus 131 ~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~-~~n~G~a~ArN~G~~~A~Gd~llf 209 (867)
.+.+.+...+. .++++++.. .++.|.++|.|.|+..++||+|++
T Consensus 99 ----------------------------------~~~~~~~~~~~-~~~~~~~~~~~~~~gK~~al~~~l~~~~~d~V~~ 143 (439)
T COG1215 99 ----------------------------------YEILEELGAEY-GPNFRVIYPEKKNGGKAGALNNGLKRAKGDVVVI 143 (439)
T ss_pred ----------------------------------HHHHHHHHhhc-CcceEEEeccccCccchHHHHHHHhhcCCCEEEE
Confidence 34455555443 146677644 578999999999999999999999
Q ss_pred EcCCcccCccchHHHHHHHHhcCCceeeeEEeeecCCCceeccccccccccccccccccccCCcCcCCCCCCCCCccccc
Q psy1765 210 LDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSP 289 (867)
Q Consensus 210 LDaD~~v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~~ 289 (867)
+|+|..++|++|..++..+..++.++++..............-.....-.+.....+... ... .--...
T Consensus 144 ~DaD~~~~~d~l~~~~~~f~~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---------~~~--~~g~~~ 212 (439)
T COG1215 144 LDADTVPEPDALRELVSPFEDPPVGAVVGTPRIRNRPDPSNLLGRIQAIEYLSAFYFRLR---------AAS--KGGLIS 212 (439)
T ss_pred EcCCCCCChhHHHHHHhhhcCCCeeEEeCCceeeecCChhhhcchhcchhhhhhHHHhhh---------hhh--hcCCeE
Confidence 999999999999999999998877634332211111100000000000000000000000 000 001346
Q ss_pred ccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEcccEEEEEeccCCCCCCCCCCchhhhhhHHHH
Q psy1765 290 TMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGHVFRSRRPYNNGHNEDPLTRNSLRVA 369 (867)
Q Consensus 290 ~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V~H~~r~~~~y~~~~~~~~~~rN~~R~a 369 (867)
.+.|++.++||++++++||+++... .||.++++|+...|+++.++|++.+.-. .|.....+.+.+.|.+
T Consensus 213 ~~~G~~~~~rr~aL~~~g~~~~~~i---~ED~~lt~~l~~~G~~~~~~~~~~~~~~--------~p~t~~~~~~Qr~RW~ 281 (439)
T COG1215 213 FLSGSSSAFRRSALEEVGGWLEDTI---TEDADLTLRLHLRGYRVVYVPEAIVWTE--------APETLKELWRQRLRWA 281 (439)
T ss_pred EEcceeeeEEHHHHHHhCCCCCCce---eccHHHHHHHHHCCCeEEEeecceEeee--------CcccHHHHHHHHHHHH
Confidence 7889999999999999999999775 7999999999999999999998844322 2334445566666666
Q ss_pred HhcHHHH
Q psy1765 370 HVWMDEY 376 (867)
Q Consensus 370 ~~w~d~~ 376 (867)
.-.+..+
T Consensus 282 ~g~~~~~ 288 (439)
T COG1215 282 RGGLQVL 288 (439)
T ss_pred cccceee
Confidence 5554433
|
|
| >cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.4e-20 Score=192.39 Aligned_cols=197 Identities=21% Similarity=0.200 Sum_probs=134.8
Q ss_pred EEEEeCCCChHHHHHHHHHHHhcCc----cccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHHHh
Q psy1765 56 VIICFYNEHPATLYRSVQTLLSRTG----QSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRAR 131 (867)
Q Consensus 56 VIIp~yNe~~~~l~~~l~Svl~qt~----~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~a~ 131 (867)
||||+|||+. .|.+||+||++|++ +++ |||||||||+|++
T Consensus 1 iiip~yN~~~-~l~~~l~~l~~~~~~~~~~~~--eiivvdd~S~D~t--------------------------------- 44 (211)
T cd04188 1 VVIPAYNEEK-RLPPTLEEAVEYLEERPSFSY--EIIVVDDGSKDGT--------------------------------- 44 (211)
T ss_pred CEEcccChHH-HHHHHHHHHHHHHhccCCCCE--EEEEEeCCCCCch---------------------------------
Confidence 7999999765 99999999999865 466 9999999998873
Q ss_pred hhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhcCCCEEEEEc
Q psy1765 132 MFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLVFLD 211 (867)
Q Consensus 132 ~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A~Gd~llfLD 211 (867)
.+.+.++.+.. +..+++++.++|.|+++|+|.|++.|+||||+|+|
T Consensus 45 ---------------------------------~~~~~~~~~~~-~~~i~~i~~~~n~G~~~a~~~g~~~a~gd~i~~ld 90 (211)
T cd04188 45 ---------------------------------AEVARKLARKN-PALIRVLTLPKNRGKGGAVRAGMLAARGDYILFAD 90 (211)
T ss_pred ---------------------------------HHHHHHHHHhC-CCcEEEEEcccCCCcHHHHHHHHHHhcCCEEEEEe
Confidence 34455555544 12369999999999999999999999999999999
Q ss_pred CCcccCccchHHHHHHHHhcCCceeeeEEeeecCCCceeccccccccccccccccccccCCcCcCCCCCCCCCccccccc
Q psy1765 212 SHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTM 291 (867)
Q Consensus 212 aD~~v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~ 291 (867)
+|..++|++++.+++.+..++..+|.+.......+..... ...+........+....+. . .++ .+..
T Consensus 91 ~D~~~~~~~l~~l~~~~~~~~~~~v~g~r~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~---------~~~-~d~~ 157 (211)
T cd04188 91 ADLATPFEELEKLEEALKTSGYDIAIGSRAHLASAAVVKR--SWLRNLLGRGFNFLVRLLL-G---------LGI-KDTQ 157 (211)
T ss_pred CCCCCCHHHHHHHHHHHhccCCcEEEEEeeccCCcccccc--cHHHHHHHHHHHHHHHHHc-C---------CCC-cccc
Confidence 9999999999999999776665555543322111110000 0000000000000000000 0 000 1122
Q ss_pred ccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEc
Q psy1765 292 AGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIP 338 (867)
Q Consensus 292 ~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P 338 (867)
.+..+++|+++.++++..+ ...| .+|+||++|+.+.|+++..+|
T Consensus 158 -~g~~~~~r~~~~~~~~~~~-~~~~-~~d~el~~r~~~~g~~~~~vp 201 (211)
T cd04188 158 -CGFKLFTRDAARRLFPRLH-LERW-AFDVELLVLARRLGYPIEEVP 201 (211)
T ss_pred -cCceeEcHHHHHHHHhhhh-ccce-EeeHHHHHHHHHcCCeEEEcC
Confidence 3567899999999976432 2334 579999999999999999999
|
UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate. |
| >cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.3e-20 Score=188.65 Aligned_cols=181 Identities=23% Similarity=0.202 Sum_probs=128.3
Q ss_pred EEEEeCCCChHHHHHHHHHHHhcCc--cccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHHHhhh
Q psy1765 56 VIICFYNEHPATLYRSVQTLLSRTG--QSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRARMF 133 (867)
Q Consensus 56 VIIp~yNe~~~~l~~~l~Svl~qt~--~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~a~~~ 133 (867)
||||+||++. .|.+||+|+.+|++ ..+ |||||||+|+|++
T Consensus 1 iii~~~n~~~-~l~~~l~sl~~~~~~~~~~--eiivvd~~s~d~~----------------------------------- 42 (185)
T cd04179 1 VVIPAYNEEE-NIPELVERLLAVLEEGYDY--EIIVVDDGSTDGT----------------------------------- 42 (185)
T ss_pred CeecccChHh-hHHHHHHHHHHHhccCCCE--EEEEEcCCCCCCh-----------------------------------
Confidence 7999999765 99999999999987 455 9999999998772
Q ss_pred hhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhcCCCEEEEEcCC
Q psy1765 134 GAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLVFLDSH 213 (867)
Q Consensus 134 g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A~Gd~llfLDaD 213 (867)
.+.+..+.++. +.++++..++|.|+++|+|.|++.|+||||+|+|+|
T Consensus 43 -------------------------------~~~~~~~~~~~--~~~~~~~~~~n~G~~~a~n~g~~~a~gd~i~~lD~D 89 (185)
T cd04179 43 -------------------------------AEIARELAARV--PRVRVIRLSRNFGKGAAVRAGFKAARGDIVVTMDAD 89 (185)
T ss_pred -------------------------------HHHHHHHHHhC--CCeEEEEccCCCCccHHHHHHHHHhcCCEEEEEeCC
Confidence 34555665555 678999999999999999999999999999999999
Q ss_pred cccCccchHHHHHHHHhcCCceeeeEEeeecCCCceeccccccccccccccccccccCCcCcCCCCCCCCCccccccccc
Q psy1765 214 IEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMAG 293 (867)
Q Consensus 214 ~~v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~G 293 (867)
+.+.|+||+.++..+...+..+|++.....++. ...........+...+..... .......+.|
T Consensus 90 ~~~~~~~l~~l~~~~~~~~~~~v~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~ 153 (185)
T cd04179 90 LQHPPEDIPKLLEKLLEGGADVVIGSRFVRGGG----AGMPLLRRLGSRLFNFLIRLL------------LGVRISDTQS 153 (185)
T ss_pred CCCCHHHHHHHHHHHhccCCcEEEEEeecCCCc----ccchHHHHHHHHHHHHHHHHH------------cCCCCcCCCC
Confidence 999999999999996666555554433222221 000000000000000000000 1123456778
Q ss_pred ceEeEeHHHHHHh--CCCCCCCCCCcccchHHHHHH
Q psy1765 294 GLFAIDRQYFDSL--GQYDAGLEIWGGENLELSFRI 327 (867)
Q Consensus 294 ~~~airR~~f~~v--GgfDe~~~~~G~ED~Dls~Rl 327 (867)
++++++|++|+++ |++++.| .+|+|+++|+
T Consensus 154 ~~~~~~r~~~~~i~~~~~~~~~----~~~~~~~~~~ 185 (185)
T cd04179 154 GFRLFRREVLEALLSLLESNGF----EFGLELLVGA 185 (185)
T ss_pred ceeeeHHHHHHHHHhhccccCc----ceeeEeeecC
Confidence 8999999999999 7888876 4677887763
|
DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex |
| >cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin | Back alignment and domain information |
|---|
Probab=99.82 E-value=5e-20 Score=196.04 Aligned_cols=140 Identities=9% Similarity=0.016 Sum_probs=92.6
Q ss_pred hHHhHhhhhcCCCEEEEEcCCcccCccchHHHHHHHHhcCC-ceeeeEEeeecCC-Cceecccccccccccccccccccc
Q psy1765 193 RARMFGAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAERTN-TVTVPIIDIINAD-TFQYTSSALVRGGFNWGLHFKWEN 270 (867)
Q Consensus 193 ~ArN~G~~~A~Gd~llfLDaD~~v~p~wLe~Ll~~l~~~~~-~vv~p~i~~i~~~-~~~~~~~~~~~g~f~~~l~~~~~~ 270 (867)
.+.|.|+..|+||||+++|+|+.++|+||+.+++.|..++. ++|++.+...+.. ++... ...+.+... .+
T Consensus 63 ~~~~~~~~~a~~e~i~~~DaD~~~~~~~l~~l~~~~~~~p~vg~v~g~~~~~~~~~~~~~~-----~q~~ey~~~-~~-- 134 (244)
T cd04190 63 NYFCRVLFPDDPEFILLVDADTKFDPDSIVQLYKAMDKDPEIGGVCGEIHPMGKKQGPLVM-----YQVFEYAIS-HW-- 134 (244)
T ss_pred HHHHHHhhcCCCCEEEEECCCCcCCHhHHHHHHHHHHhCCCEEEEEeeeEEcCCcchhHHH-----hHheehhhh-hh--
Confidence 46788888999999999999999999999999999977665 5566655443321 11000 000000000 00
Q ss_pred CCcCcCCCCCCCCCcccccccccceEeEeHHHHHHhCCCCCCCC-----------------CCcccchHHHHHHHHcCCe
Q psy1765 271 LPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLE-----------------IWGGENLELSFRIWMCGGS 333 (867)
Q Consensus 271 ~~~~~~~~~~~~~~p~~~~~~~G~~~airR~~f~~vGgfDe~~~-----------------~~G~ED~Dls~Rl~~~G~~ 333 (867)
..... ....-.+..+.|+++++|+++++++|++...+. ..-+||.+|++|+...|++
T Consensus 135 -----~~~~~-~s~~g~~~~~~G~~~~~R~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ED~~l~~~l~~~G~~ 208 (244)
T cd04190 135 -----LDKAF-ESVFGFVTCLPGCFSMYRIEALKGDNGGKGPLLDYAYLTNTVDSLHKKNNLDLGEDRILCTLLLKAGPK 208 (244)
T ss_pred -----hcccH-HHcCCceEECCCceEEEEehhhcCCccccccchhhccccCcccchHHHHHHhHhcccceeHHHhccCCc
Confidence 00000 000112456789999999999999988654210 0127999999999999999
Q ss_pred EEE--EcccEEEEEe
Q psy1765 334 LAM--IPCSRIGHVF 346 (867)
Q Consensus 334 i~~--~P~s~V~H~~ 346 (867)
+.+ .|.+.++...
T Consensus 209 ~~~~~~~~a~~~~~~ 223 (244)
T cd04190 209 RKYLYVPGAVAETDV 223 (244)
T ss_pred cEEEEecccEEEEEC
Confidence 999 9999887643
|
Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified. |
| >cd06423 CESA_like CESA_like is the cellulose synthase superfamily | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.4e-20 Score=180.43 Aligned_cols=178 Identities=21% Similarity=0.238 Sum_probs=124.2
Q ss_pred EEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHHHhhhhh
Q psy1765 56 VIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRARMFGA 135 (867)
Q Consensus 56 VIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~a~~~g~ 135 (867)
||||+||++. .|.+||+||++|+++.+ |||||||+|+|.+
T Consensus 1 Viip~~n~~~-~l~~~l~sl~~q~~~~~--~iivvdd~s~d~t------------------------------------- 40 (180)
T cd06423 1 IIVPAYNEEA-VIERTIESLLALDYPKL--EVIVVDDGSTDDT------------------------------------- 40 (180)
T ss_pred CeecccChHH-HHHHHHHHHHhCCCCce--EEEEEeCCCccch-------------------------------------
Confidence 7999999874 99999999999999888 9999999999873
Q ss_pred hhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhcCCCEEEEEcCCcc
Q psy1765 136 KYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLVFLDSHIE 215 (867)
Q Consensus 136 ~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A~Gd~llfLDaD~~ 215 (867)
.+.+.++.... ...+.++..+++.|++.|+|.|++.++++||+|+|+|+.
T Consensus 41 -----------------------------~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~n~~~~~~~~~~i~~~D~D~~ 90 (180)
T cd06423 41 -----------------------------LEILEELAALY-IRRVLVVRDKENGGKAGALNAGLRHAKGDIVVVLDADTI 90 (180)
T ss_pred -----------------------------HHHHHHHhccc-cceEEEEEecccCCchHHHHHHHHhcCCCEEEEECCCCC
Confidence 22333333322 245778888889999999999999999999999999999
Q ss_pred cCccchHHHHHHHHhcCC-ceeeeEEeeecCCC-ceeccccccccccccccccccccCCcCcCCCCCCCCCccccccccc
Q psy1765 216 VNTHWLEPLLVPIAERTN-TVTVPIIDIINADT-FQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMAG 293 (867)
Q Consensus 216 v~p~wLe~Ll~~l~~~~~-~vv~p~i~~i~~~~-~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~G 293 (867)
+.++||+.++..+.+++. .++++......... +... +.. ..+..... .. ............+.|
T Consensus 91 ~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~--------~~~-~~~~~~~~----~~-~~~~~~~~~~~~~~g 156 (180)
T cd06423 91 LEPDALKRLVVPFFADPKVGAVQGRVRVRNGSENLLTR--------LQA-IEYLSIFR----LG-RRAQSALGGVLVLSG 156 (180)
T ss_pred cChHHHHHHHHHhccCCCeeeEeeeEEEecCcCcceec--------cch-heecceee----ee-eehhheecceeecCc
Confidence 999999999777766554 55555554433221 1000 000 00000000 00 000001123456788
Q ss_pred ceEeEeHHHHHHhCCCCCCCCCCcccc
Q psy1765 294 GLFAIDRQYFDSLGQYDAGLEIWGGEN 320 (867)
Q Consensus 294 ~~~airR~~f~~vGgfDe~~~~~G~ED 320 (867)
++++++|++|+++||||+.+. +||
T Consensus 157 ~~~~~~~~~~~~~ggf~~~~~---~eD 180 (180)
T cd06423 157 AFGAFRREALREVGGWDEDTL---TED 180 (180)
T ss_pred hHHHHHHHHHHHhCCccccCc---CCC
Confidence 999999999999999999864 576
|
The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the |
| >cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1 | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.6e-19 Score=178.55 Aligned_cols=176 Identities=19% Similarity=0.159 Sum_probs=122.7
Q ss_pred EEEEeCCCChHHHHHHHHHHHhcC---ccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHHHhh
Q psy1765 56 VIICFYNEHPATLYRSVQTLLSRT---GQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRARM 132 (867)
Q Consensus 56 VIIp~yNe~~~~l~~~l~Svl~qt---~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~a~~ 132 (867)
||||+||++. .|.++|+||..+. +..+ |||||||+|+|++
T Consensus 1 viIp~~n~~~-~l~~~l~sl~~~~~~~~~~~--eiivvdd~s~d~t---------------------------------- 43 (181)
T cd04187 1 IVVPVYNEEE-NLPELYERLKAVLESLGYDY--EIIFVDDGSTDRT---------------------------------- 43 (181)
T ss_pred CEEeecCchh-hHHHHHHHHHHHHHhcCCCe--EEEEEeCCCCccH----------------------------------
Confidence 7999999875 8888888887654 4556 9999999998872
Q ss_pred hhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhcCCCEEEEEcC
Q psy1765 133 FGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLVFLDS 212 (867)
Q Consensus 133 ~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A~Gd~llfLDa 212 (867)
.+.+..+.++. ++++++...+|.|.++|+|.|++.|+|||++|+|+
T Consensus 44 --------------------------------~~~~~~~~~~~--~~i~~i~~~~n~G~~~a~n~g~~~a~~d~i~~~D~ 89 (181)
T cd04187 44 --------------------------------LEILRELAARD--PRVKVIRLSRNFGQQAALLAGLDHARGDAVITMDA 89 (181)
T ss_pred --------------------------------HHHHHHHHhhC--CCEEEEEecCCCCcHHHHHHHHHhcCCCEEEEEeC
Confidence 33445555444 68999999999999999999999999999999999
Q ss_pred CcccCccchHHHHHHHHhcCCceeeeEEeeecCCCceeccccccccccccccccccccCCcCcCCCCCCCCCcccccccc
Q psy1765 213 HIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMA 292 (867)
Q Consensus 213 D~~v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 292 (867)
|+.++++||+.+++.+..+ ..+|.+.........+. ....+......... .....+...
T Consensus 90 D~~~~~~~l~~l~~~~~~~-~~~v~g~~~~~~~~~~~--------~~~~~~~~~~~~~~------------~~~~~~~~~ 148 (181)
T cd04187 90 DLQDPPELIPEMLAKWEEG-YDVVYGVRKNRKESWLK--------RLTSKLFYRLINKL------------SGVDIPDNG 148 (181)
T ss_pred CCCCCHHHHHHHHHHHhCC-CcEEEEEecCCcchHHH--------HHHHHHHHHHHHHH------------cCCCCCCCC
Confidence 9999999999999996544 44554443221110000 00000000000000 011334566
Q ss_pred cceEeEeHHHHHHhCCCCCCCCCCcccchHHHH
Q psy1765 293 GGLFAIDRQYFDSLGQYDAGLEIWGGENLELSF 325 (867)
Q Consensus 293 G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~ 325 (867)
+++++++|++|+++|+|||.+.. ..+.++.+
T Consensus 149 ~~~~~~~r~~~~~i~~~d~~~~~--~~~~~~~~ 179 (181)
T cd04187 149 GDFRLMDRKVVDALLLLPERHRF--LRGLIAWV 179 (181)
T ss_pred CCEEEEcHHHHHHHHhcCCCCcc--HHHHHHHh
Confidence 88899999999999999998864 56655544
|
A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily. |
| >cd06438 EpsO_like EpsO protein participates in the methanolan synthesis | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.2e-18 Score=176.79 Aligned_cols=177 Identities=20% Similarity=0.180 Sum_probs=113.8
Q ss_pred EEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHHHhhhhh
Q psy1765 56 VIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRARMFGA 135 (867)
Q Consensus 56 VIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~a~~~g~ 135 (867)
||||+|||+. .|.+||+||++|++|....|||||||+|+|.+
T Consensus 1 VvIp~~ne~~-~i~~~l~sl~~~~~p~~~~eiivvdd~s~D~t------------------------------------- 42 (183)
T cd06438 1 ILIPAHNEEA-VIGNTVRSLKAQDYPRELYRIFVVADNCTDDT------------------------------------- 42 (183)
T ss_pred CEEeccchHH-HHHHHHHHHHhcCCCCcccEEEEEeCCCCchH-------------------------------------
Confidence 7999999875 99999999999998532239999999998872
Q ss_pred hhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhc-----CCCEEEEE
Q psy1765 136 KYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYA-----TGKVLVFL 210 (867)
Q Consensus 136 ~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A-----~Gd~llfL 210 (867)
.+.+. .. ...+.+...+.+.|.+.|+|.|+++| ++|+|+|+
T Consensus 43 -----------------------------~~~~~----~~-~~~~~~~~~~~~~gk~~aln~g~~~a~~~~~~~d~v~~~ 88 (183)
T cd06438 43 -----------------------------AQVAR----AA-GATVLERHDPERRGKGYALDFGFRHLLNLADDPDAVVVF 88 (183)
T ss_pred -----------------------------HHHHH----Hc-CCeEEEeCCCCCCCHHHHHHHHHHHHHhcCCCCCEEEEE
Confidence 11121 11 12344444566889999999999876 49999999
Q ss_pred cCCcccCccchHHHHHHHHhcCCceeeeEEeeecCC-CceeccccccccccccccccccccCCcCcCCCCCCCCCccccc
Q psy1765 211 DSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINAD-TFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSP 289 (867)
Q Consensus 211 DaD~~v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~-~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~~ 289 (867)
|+|+.++|+||..+++.+..+.. +|.+.....+.+ .+..... .+.+.+............ -...
T Consensus 89 DaD~~~~p~~l~~l~~~~~~~~~-~v~g~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~---------~~~~ 153 (183)
T cd06438 89 DADNLVDPNALEELNARFAAGAR-VVQAYYNSKNPDDSWITRLY-----AFAFLVFNRLRPLGRSNL---------GLSC 153 (183)
T ss_pred cCCCCCChhHHHHHHHHHhhCCC-eeEEEEeeeCCccCHHHHHH-----HHHHHHHHHHHHHHHHHc---------CCCe
Confidence 99999999999999999986554 333322222111 1100000 000000000000000000 0123
Q ss_pred ccccceEeEeHHHHHHhCCCCCCCCCCcccchHH
Q psy1765 290 TMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLEL 323 (867)
Q Consensus 290 ~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dl 323 (867)
.+.|+++++||++|++ |||++.-. .||+||
T Consensus 154 ~~~G~~~~~rr~~l~~-~g~~~~~l---~ED~~~ 183 (183)
T cd06438 154 QLGGTGMCFPWAVLRQ-APWAAHSL---TEDLEF 183 (183)
T ss_pred eecCchhhhHHHHHHh-CCCCCCCc---ccccCC
Confidence 4568889999999999 88987543 699875
|
The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier. |
| >cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan | Back alignment and domain information |
|---|
Probab=99.76 E-value=9.9e-18 Score=178.76 Aligned_cols=211 Identities=12% Similarity=0.092 Sum_probs=134.6
Q ss_pred EEEEEEeCCCChHHHHHHHHHHHh----cCc-cccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhH
Q psy1765 54 TSVIICFYNEHPATLYRSVQTLLS----RTG-QSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLI 128 (867)
Q Consensus 54 vSVIIp~yNe~~~~l~~~l~Svl~----qt~-~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 128 (867)
|||+||+|||+...|.++|.|+.+ |.| +.+ ||+|+||++++... +
T Consensus 1 ~SIliP~~ne~~~~l~~~l~~~~~~~~~~~~~~~~--eI~vldD~~d~~~~----~------------------------ 50 (254)
T cd04191 1 TAIVMPVYNEDPARVFAGLRAMYESLAKTGLADHF--DFFILSDTRDPDIW----L------------------------ 50 (254)
T ss_pred CEEEEeCCCCCHHHHHHHHHHHHHHHHhcCCcCce--EEEEECCCCChHHH----H------------------------
Confidence 699999999999779999998875 665 777 99999998865510 0
Q ss_pred HHhhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcC-CCCEEEEEcCCCcCchhH-HhHhhhh--cCC
Q psy1765 129 RARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLN-NGRVHLYRTSKREGLIRA-RMFGAKY--ATG 204 (867)
Q Consensus 129 ~a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~-~~~vrii~~~~n~G~a~A-rN~G~~~--A~G 204 (867)
+. .+.+.+..+++. ..+|++++.++|.|..++ .|.++.. +++
T Consensus 51 -~~---------------------------------~~~~~~l~~~~~~~~~v~~~~r~~~~g~Kag~l~~~~~~~~~~~ 96 (254)
T cd04191 51 -AE---------------------------------EAAWLDLCEELGAQGRIYYRRRRENTGRKAGNIADFCRRWGSRY 96 (254)
T ss_pred -HH---------------------------------HHHHHHHHHHhCCCCcEEEEEcCCCCCccHHHHHHHHHHhCCCC
Confidence 00 111222222221 368999999989888544 4444444 688
Q ss_pred CEEEEEcCCcccCccchHHHHHHHHhcCC-ceeeeEEeeecCCCceeccccccccccccccccccccCCcCcCCCCCCCC
Q psy1765 205 KVLVFLDSHIEVNTHWLEPLLVPIAERTN-TVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFI 283 (867)
Q Consensus 205 d~llfLDaD~~v~p~wLe~Ll~~l~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~ 283 (867)
|||+++|+|..++|++|..++..+..++. ++|.......+.+++...-.......|...+ ......
T Consensus 97 ~~i~~~DaD~~~~p~~l~~~v~~~~~~~~vg~vq~~~~~~n~~~~~~~~~~~~~~~~~~~~------~~~~~~------- 163 (254)
T cd04191 97 DYMVVLDADSLMSGDTIVRLVRRMEANPRAGIIQTAPKLIGAETLFARLQQFANRLYGPVF------GRGLAA------- 163 (254)
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHHhCCCEEEEeCCceeECCCCHHHHHHHHHHHHHHHHH------HHHHHH-------
Confidence 99999999999999999999999987765 4443222233333221100000000000000 000000
Q ss_pred CcccccccccceEeEeHHHHHHhCCCCC--CCCCC----cccchHHHHHHHHcCCeEEEEcccE
Q psy1765 284 KPILSPTMAGGLFAIDRQYFDSLGQYDA--GLEIW----GGENLELSFRIWMCGGSLAMIPCSR 341 (867)
Q Consensus 284 ~p~~~~~~~G~~~airR~~f~~vGgfDe--~~~~~----G~ED~Dls~Rl~~~G~~i~~~P~s~ 341 (867)
.........|.++++||+.|+++|++++ ++..| =.||+++++|+..+||++++.|.+.
T Consensus 164 ~~~~~~~~~G~~~~~Rr~al~~~~~~~~i~g~g~~~~~~l~eD~~l~~~~~~~G~ri~~~~~~~ 227 (254)
T cd04191 164 WQGGEGNYWGHNAIIRVAAFMEHCALPVLPGRPPFGGHILSHDFVEAALMRRAGWEVRLAPDLE 227 (254)
T ss_pred hcCCccCccceEEEEEHHHHHHhcCCccccCCCCCCCCeecHHHHHHHHHHHcCCEEEEccCCc
Confidence 0001235668999999999999766543 22222 1699999999999999999999764
|
Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane. |
| >KOG3737|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=6.5e-18 Score=178.33 Aligned_cols=183 Identities=24% Similarity=0.516 Sum_probs=120.2
Q ss_pred chhhhhhHHHHHhcHHHHHHHHhhcCCCcCCCCCCCchhHHHHHHHcCCcccccccccccCCCc----CCCchHHHHhhh
Q psy1765 359 DPLTRNSLRVAHVWMDEYIEHFLKQRPEARNIDYGDVTDRKQLRARLGCKSFKWYLDNVYPEMI----LPSDDEERLKKK 434 (867)
Q Consensus 359 ~~~~rN~~R~a~~w~d~~~~~~y~~~p~~~~~~~gdi~~r~~lr~~l~ck~F~Wyl~~v~p~~~----~~~~~~~~~~~~ 434 (867)
..+..|+.|+.+.|+|+|+++||.+.|++..+++||||++++||++|+||||+||+++|+-+.. ++..+. .
T Consensus 406 p~i~iNy~RVvetW~Ddyk~YfytreP~a~~l~~GDISeqlalr~~lnCkSFkWfMe~iAYDv~~~yP~lP~N~-----~ 480 (603)
T KOG3737|consen 406 PPILINYVRVVETWWDDYKDYFYTREPEAQALPYGDISEQLALREDLNCKSFKWFMEEIAYDVTSHYPLLPKNV-----D 480 (603)
T ss_pred CceEeehhhHHHHHHHhhhhheeecChhhccCCcccHHHHHHhHhhcCCchhHHHHHHHHHHHHhcCCCCCCCC-----c
Confidence 3467899999999999999999999999999999999999999999999999999999942211 111111 2
Q ss_pred hccccCCCCCCCccccccccCceeEEEeecchhhhhhhccCcccCCCCccCCchhHhhhhhccccccccccccccCcccc
Q psy1765 435 WAQVEQPKFQPWYSRARNYTNSLRVAHVWMDEYIEHFLKQRPEARNIDYGDVTDRKQLRARLGCKSFKWYLDNVYPEMIL 514 (867)
Q Consensus 435 ~~~~~~~~~~p~~s~~~~~~N~~R~aeVWmDeyk~~~y~~~p~~~~~~~gdis~r~~LR~~l~CksF~Wyl~nv~p~~~~ 514 (867)
|+.+...++. -|+|..-. .|. | |.=.-
T Consensus 481 WGE~R~~at~-----------------~ClDsMG~-----~p~------g-------------------------~mglt 507 (603)
T KOG3737|consen 481 WGEIRGFATA-----------------YCLDSMGK-----TPG------G-------------------------FMGLT 507 (603)
T ss_pred chhccCcccc-----------------hhHHhcCC-----CCC------C-------------------------ccccc
Confidence 3333322221 12222111 000 0 00001
Q ss_pred CCCcHHHHhhhhhcccCCCcccccccccccccceeeeecCCCceecccCCCCCCCcEEEEecCCCCCCceeeecCCCc-e
Q psy1765 515 PSDDEERLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSSTDLCLTSKVDKTKGSPLVLKKCDELSKTQHWSKTDKSE-L 593 (867)
Q Consensus 515 p~~~~~~~~~~~~~~~~~~~~~~~g~~rn~~~~g~ir~~~~~~CLD~~~~~~~g~~v~l~~C~~~~~~Q~w~~t~~~~-i 593 (867)
||+.. ..+| .+ |- ..-|++ .+...||.+ .|..+.+-.|.-..-+-.|.|..+.. +
T Consensus 508 ~CHg~------------GgNQ-L~---Rl-N~agQl--~qge~CltA-----dg~~i~~~hC~lgtv~g~WqY~~~tk~~ 563 (603)
T KOG3737|consen 508 PCHGM------------GGNQ-LF---RL-NEAGQL--MQGEQCLTA-----DGSKIMITHCNLGTVKGEWQYFKNTKRF 563 (603)
T ss_pred cccCC------------CCce-EE---Ee-ccccch--hccceeeec-----CCceEEEEEeecccccCceehhhcchhe
Confidence 44431 0011 10 10 111222 246779974 57889999999877788999987553 3
Q ss_pred E-EeeceeeecC--CCccEEEeCCCCCCCccee
Q psy1765 594 V-LAELLCLDAG--ATKPKLTKCHEMGGSQEYW 623 (867)
Q Consensus 594 ~-~~~~~CLd~~--g~~v~l~~C~~~~~~Q~~w 623 (867)
. ..+++|+|.. +..+.+..|+.....|+||
T Consensus 564 ~H~~~~kC~~~se~~~qv~l~~Cd~~~~~Qkw~ 596 (603)
T KOG3737|consen 564 THIPSGKCLDRSEVLHQVFLSNCDSSKTTQKWE 596 (603)
T ss_pred eeccccccccccchhheeeecccCCCchhheee
Confidence 3 3568999988 4568999999999999875
|
|
| >PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.3e-17 Score=183.09 Aligned_cols=207 Identities=17% Similarity=0.176 Sum_probs=136.0
Q ss_pred CCCCCcEEEEEEeCCCChHHHHHHHHHHHhcCc-------c-ccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEE
Q psy1765 48 PSTLPSTSVIICFYNEHPATLYRSVQTLLSRTG-------Q-SLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLY 119 (867)
Q Consensus 48 ~~~~P~vSVIIp~yNe~~~~l~~~l~Svl~qt~-------~-~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~ 119 (867)
....|.+|||||+|||+. .|.++|+++.++.. . ++ |||||||||+|++
T Consensus 66 ~~~~~~isVVIP~yNe~~-~i~~~L~~l~~~~~~~~~~~~~~~~--EIIVVDDgStD~T--------------------- 121 (333)
T PTZ00260 66 KDSDVDLSIVIPAYNEED-RLPKMLKETIKYLESRSRKDPKFKY--EIIIVNDGSKDKT--------------------- 121 (333)
T ss_pred CCCCeEEEEEEeeCCCHH-HHHHHHHHHHHHHHhhhccCCCCCE--EEEEEeCCCCCch---------------------
Confidence 345689999999999876 89999999987532 1 34 7888888877763
Q ss_pred EeccchhhHHHhhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhc--CCCCEEEEEcCCCcCchhHHhH
Q psy1765 120 RTSKREGLIRARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGL--NNGRVHLYRTSKREGLIRARMF 197 (867)
Q Consensus 120 ~~~~~~gi~~a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~--~~~~vrii~~~~n~G~a~ArN~ 197 (867)
.+.+.++.+.. ...++++++.++|.|.+.|+|.
T Consensus 122 ---------------------------------------------~~i~~~~~~~~~~~~~~i~vi~~~~N~G~~~A~~~ 156 (333)
T PTZ00260 122 ---------------------------------------------LKVAKDFWRQNINPNIDIRLLSLLRNKGKGGAVRI 156 (333)
T ss_pred ---------------------------------------------HHHHHHHHHhcCCCCCcEEEEEcCCCCChHHHHHH
Confidence 44455555432 1246999999999999999999
Q ss_pred hhhhcCCCEEEEEcCCcccCccchHHHHHHHHh---cCCceeeeEEeeecCCCceeccccccccccccccccccccCCcC
Q psy1765 198 GAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAE---RTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKG 274 (867)
Q Consensus 198 G~~~A~Gd~llfLDaD~~v~p~wLe~Ll~~l~~---~~~~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~ 274 (867)
|+++|+||+|+++|+|...+++.++.+++.+.+ +..++|++............ .....+....+..++-...+..
T Consensus 157 Gi~~a~gd~I~~~DaD~~~~~~~l~~l~~~l~~~~~~~~dvV~GsR~~~~~~~~~~-~~~~~r~~~~~~~~~l~~~~~~- 234 (333)
T PTZ00260 157 GMLASRGKYILMVDADGATDIDDFDKLEDIMLKIEQNGLGIVFGSRNHLVDSDVVA-KRKWYRNILMYGFHFIVNTICG- 234 (333)
T ss_pred HHHHccCCEEEEEeCCCCCCHHHHHHHHHHHHHhhccCCceEEeeccccccCcccc-cCcHHHHHHHHHHHHHHHHHcC-
Confidence 999999999999999999999999999999875 44456655432211110000 0000000000000000000000
Q ss_pred cCCCCCCCCCcccccccccceEeEeHHHHHHhCCCC-CCCCCCcccchHHHHHHHHcCCeEEEEcc
Q psy1765 275 TLNSSEDFIKPILSPTMAGGLFAIDRQYFDSLGQYD-AGLEIWGGENLELSFRIWMCGGSLAMIPC 339 (867)
Q Consensus 275 ~~~~~~~~~~p~~~~~~~G~~~airR~~f~~vGgfD-e~~~~~G~ED~Dls~Rl~~~G~~i~~~P~ 339 (867)
....-...++-+++|++++++ |. .....| .-|+|+..++...|.+|..+|-
T Consensus 235 -----------~~i~D~~~Gfk~~~r~~~~~i--~~~~~~~~~-~fd~Ell~~a~~~g~~I~EvPv 286 (333)
T PTZ00260 235 -----------TNLKDTQCGFKLFTRETARII--FPSLHLERW-AFDIEIVMIAQKLNLPIAEVPV 286 (333)
T ss_pred -----------CCcccCCCCeEEEeHHHHHHH--hhhccccCc-cchHHHHHHHHHcCCCEEEEce
Confidence 011122345778999999987 21 122233 4589999999999999999994
|
|
| >PRK14716 bacteriophage N4 adsorption protein B; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=6.8e-17 Score=186.47 Aligned_cols=206 Identities=16% Similarity=0.162 Sum_probs=135.2
Q ss_pred CCCCcEEEEEEeCCCChHHHHHHHHHHH-hcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhh
Q psy1765 49 STLPSTSVIICFYNEHPATLYRSVQTLL-SRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGL 127 (867)
Q Consensus 49 ~~~P~vSVIIp~yNe~~~~l~~~l~Svl-~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi 127 (867)
...|.+|||||+|||+. .|.++|+|++ +++|+++ ||||+||+|+|++
T Consensus 63 ~~~p~vaIlIPA~NE~~-vI~~~l~s~L~~ldY~~~--eIiVv~d~ndd~T----------------------------- 110 (504)
T PRK14716 63 VPEKRIAIFVPAWREAD-VIGRMLEHNLATLDYENY--RIFVGTYPNDPAT----------------------------- 110 (504)
T ss_pred CCCCceEEEEeccCchh-HHHHHHHHHHHcCCCCCe--EEEEEECCCChhH-----------------------------
Confidence 44789999999999886 9999999976 4678888 9999999988872
Q ss_pred HHHhhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcC--CCcCchhHHhHhhhhc---
Q psy1765 128 IRARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTS--KREGLIRARMFGAKYA--- 202 (867)
Q Consensus 128 ~~a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~--~n~G~a~ArN~G~~~A--- 202 (867)
.+.+++..+++ ++++++..+ ...|++.|.|.|++.+
T Consensus 111 -------------------------------------~~~v~~l~~~~--p~v~~vv~~~~gp~~Ka~aLN~~l~~~~~~ 151 (504)
T PRK14716 111 -------------------------------------LREVDRLAARY--PRVHLVIVPHDGPTSKADCLNWIYQAIFAF 151 (504)
T ss_pred -------------------------------------HHHHHHHHHHC--CCeEEEEeCCCCCCCHHHHHHHHHHHHHHh
Confidence 34455555555 667655443 2346899999998654
Q ss_pred ---CC---CEEEEEcCCcccCccchHHHHHHHHhcCCceeeeEEeeecCCCceecccccccccccccccc-ccccCCcCc
Q psy1765 203 ---TG---KVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLHF-KWENLPKGT 275 (867)
Q Consensus 203 ---~G---d~llfLDaD~~v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~-~~~~~~~~~ 275 (867)
+| |+|+++|+|+.++|++|..+...+. +...+-.|... ++... .....+.+.-.+.. .....+...
T Consensus 152 e~~~G~~~d~vvi~DAD~~v~Pd~Lr~~~~~~~-~~~~VQ~pv~~-~~~~~-----~~~~ag~y~~ef~~~~~~~l~~r~ 224 (504)
T PRK14716 152 ERERGIRFAIIVLHDAEDVIHPLELRLYNYLLP-RHDFVQLPVFS-LPRDW-----GEWVAGTYMDEFAESHLKDLPVRE 224 (504)
T ss_pred hhhcCCCcCEEEEEcCCCCcCccHHHHHHhhcC-CCCEEecceec-cCCch-----hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56 9999999999999999987655443 33222233331 11110 00001111000000 000000000
Q ss_pred CCCCCCCCCcccccccccceEeEeHHHHHHh-----CC-CCCCCCCCcccchHHHHHHHHcCCeEEEEcccEEE
Q psy1765 276 LNSSEDFIKPILSPTMAGGLFAIDRQYFDSL-----GQ-YDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIG 343 (867)
Q Consensus 276 ~~~~~~~~~p~~~~~~~G~~~airR~~f~~v-----Gg-fDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V~ 343 (867)
.. -......|.++++||++++++ |+ ||++.. .||+|+++|+.++|+++.++|.+..+
T Consensus 225 -----~L---G~~~~~~Gtg~afRR~aLe~l~~~~GG~~fd~~sL---TED~dLglRL~~~G~rv~y~p~ai~~ 287 (504)
T PRK14716 225 -----AL---GGLIPSAGVGTAFSRRALERLAAERGGQPFDSDSL---TEDYDIGLRLKRAGFRQIFVRVRADD 287 (504)
T ss_pred -----hc---CCccccCCeeEEeEHHHHHHHHhhcCCCCCCCCCc---chHHHHHHHHHHCCCEEEEecccccc
Confidence 00 011235688999999999998 43 998753 79999999999999999999987443
|
|
| >PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.4e-17 Score=177.81 Aligned_cols=204 Identities=19% Similarity=0.212 Sum_probs=124.7
Q ss_pred CCCcEEEEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHH
Q psy1765 50 TLPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIR 129 (867)
Q Consensus 50 ~~P~vSVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~ 129 (867)
..|+||||||+|||+. .|.++|+||.+|.+.....|||||||||+|++
T Consensus 29 ~~~~vSVVIPayNee~-~I~~~l~sl~~~~~~~~~~EIIVVDDgStD~T------------------------------- 76 (306)
T PRK13915 29 AGRTVSVVLPALNEEE-TVGKVVDSIRPLLMEPLVDELIVIDSGSTDAT------------------------------- 76 (306)
T ss_pred CCCCEEEEEecCCcHH-HHHHHHHHHHHHhccCCCcEEEEEeCCCccHH-------------------------------
Confidence 5689999999999876 99999999999875222239999999999983
Q ss_pred HhhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEE-EEcCCCcCchhHHhHhhhhcCCCEEE
Q psy1765 130 ARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHL-YRTSKREGLIRARMFGAKYATGKVLV 208 (867)
Q Consensus 130 a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vri-i~~~~n~G~a~ArN~G~~~A~Gd~ll 208 (867)
.+.+.++.... .....+ ...+.|.|++.|+|.|++.|+||||+
T Consensus 77 -----------------------------------~~ia~~~~~~v-~~~~~~~~~~~~n~Gkg~A~~~g~~~a~gd~vv 120 (306)
T PRK13915 77 -----------------------------------AERAAAAGARV-VSREEILPELPPRPGKGEALWRSLAATTGDIVV 120 (306)
T ss_pred -----------------------------------HHHHHHhcchh-hcchhhhhccccCCCHHHHHHHHHHhcCCCEEE
Confidence 11111111100 011111 22366899999999999999999999
Q ss_pred EEcCCcc-cCccchHHHHHHHHhcC-CceeeeEEeeecCCCceeccccccccccccccccc-cccCCcCcCCCCCCCCCc
Q psy1765 209 FLDSHIE-VNTHWLEPLLVPIAERT-NTVTVPIIDIINADTFQYTSSALVRGGFNWGLHFK-WENLPKGTLNSSEDFIKP 285 (867)
Q Consensus 209 fLDaD~~-v~p~wLe~Ll~~l~~~~-~~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~-~~~~~~~~~~~~~~~~~p 285 (867)
|+|+|+. ++|+||+.+++.+..++ .++|.+......... . ......++....+..+ ......... ..
T Consensus 121 ~lDaD~~~~~p~~l~~l~~~l~~~~~~~~V~g~~~r~~~~~-~--~~~~~~~gr~~~~~~~~l~~~~~~~l-------~~ 190 (306)
T PRK13915 121 FVDADLINFDPMFVPGLLGPLLTDPGVHLVKAFYRRPLRVS-G--GVDATGGGRVTELVARPLLNLLRPEL-------AG 190 (306)
T ss_pred EEeCccccCCHHHHHHHHHHHHhCCCceEEEEEeccccccc-c--ccCcCCCCchHHHHHHHHHHHHHHhh-------hc
Confidence 9999997 89999999999997544 455554321100000 0 0000000000000000 000000000 00
Q ss_pred ccccccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHH-HcCC-eEEEEc
Q psy1765 286 ILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIW-MCGG-SLAMIP 338 (867)
Q Consensus 286 ~~~~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~-~~G~-~i~~~P 338 (867)
+ ...+ +|.+++||++++++. |+++| +.|+++...+. ..|. ++..++
T Consensus 191 i-~dp~-sG~~a~rr~~l~~l~-~~~~y----g~e~~~l~~~~~~~g~~~i~~V~ 238 (306)
T PRK13915 191 F-VQPL-GGEYAGRRELLESLP-FVPGY----GVEIGLLIDTLDRLGLDAIAQVD 238 (306)
T ss_pred c-cCcc-hHhHHHHHHHHHhCC-CCCCC----eehHHHHHHHHHHhCcCceEEEE
Confidence 1 1223 456899999999985 66653 56899999987 4687 666666
|
|
| >cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.1e-17 Score=166.26 Aligned_cols=169 Identities=17% Similarity=0.205 Sum_probs=111.0
Q ss_pred EEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHHHhhhhh
Q psy1765 56 VIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRARMFGA 135 (867)
Q Consensus 56 VIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~a~~~g~ 135 (867)
||||+|||+. .|.+||+||++|+ +.+ |||||||+|+|.+
T Consensus 1 ViIp~~Ne~~-~l~~~l~sl~~~~-~~~--eIivvdd~S~D~t------------------------------------- 39 (191)
T cd06436 1 VLVPCLNEEA-VIQRTLASLLRNK-PNF--LVLVIDDASDDDT------------------------------------- 39 (191)
T ss_pred CEEeccccHH-HHHHHHHHHHhCC-CCe--EEEEEECCCCcCH-------------------------------------
Confidence 7999999875 9999999999999 666 9999999999883
Q ss_pred hhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcC---CCcCchhHHhHhhhhcC---------
Q psy1765 136 KYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTS---KREGLIRARMFGAKYAT--------- 203 (867)
Q Consensus 136 ~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~---~n~G~a~ArN~G~~~A~--------- 203 (867)
.+.+. + ....+++++++.. .+.|++.|+|.|++.++
T Consensus 40 -----------------------------~~~~~-~--~~~~~~v~~i~~~~~~~~~Gk~~aln~g~~~~~~~~~~~g~~ 87 (191)
T cd06436 40 -----------------------------AGIVR-L--AITDSRVHLLRRHLPNARTGKGDALNAAYDQIRQILIEEGAD 87 (191)
T ss_pred -----------------------------HHHHh-h--eecCCcEEEEeccCCcCCCCHHHHHHHHHHHHhhhccccccC
Confidence 12222 1 1112578888753 57899999999999875
Q ss_pred --CCEEEEEcCCcccCccchHHHHHHHHhcCCceeeeEEeeecCCCceeccccccccccccccccccccCCcCcCCCCCC
Q psy1765 204 --GKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSED 281 (867)
Q Consensus 204 --Gd~llfLDaD~~v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~ 281 (867)
+|+|+|+|+|+.++|+||+.++..+.....+++.+.+...+...-.+. ......|...+..... .. .
T Consensus 88 ~~~d~v~~~DaD~~~~~~~l~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~----~~~~~e~~~~~~~~~~----~~---~ 156 (191)
T cd06436 88 PERVIIAVIDADGRLDPNALEAVAPYFSDPRVAGTQSRVRMYNRHKNLLT----ILQDLEFFIIIAATQS----LR---A 156 (191)
T ss_pred CCccEEEEECCCCCcCHhHHHHHHHhhcCCceEEEeeeEEEecCCCCHHH----HHHHHHHHHHHHHHHH----HH---H
Confidence 379999999999999999998887764333555544433332210000 0000001100000000 00 0
Q ss_pred CCCcccccccccceEeEeHHHHHHhCCCCC
Q psy1765 282 FIKPILSPTMAGGLFAIDRQYFDSLGQYDA 311 (867)
Q Consensus 282 ~~~p~~~~~~~G~~~airR~~f~~vGgfDe 311 (867)
. .....+.|.++++||++++++|||++
T Consensus 157 ~---~~~~~~~G~~~~~r~~~l~~vgg~~~ 183 (191)
T cd06436 157 L---TGTVGLGGNGQFMRLSALDGLIGEEP 183 (191)
T ss_pred h---cCcEEECCeeEEEeHHHHHHhhcCCC
Confidence 0 01123568889999999999998876
|
N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase. |
| >PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=9.4e-16 Score=169.78 Aligned_cols=190 Identities=17% Similarity=0.147 Sum_probs=124.8
Q ss_pred CCcEEEEEEeCCCChHHHHHHHHHHH---hcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhh
Q psy1765 51 LPSTSVIICFYNEHPATLYRSVQTLL---SRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGL 127 (867)
Q Consensus 51 ~P~vSVIIp~yNe~~~~l~~~l~Svl---~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi 127 (867)
++++|||||+|||+. .|.++++++. ++.+.++ |||||||||+|++
T Consensus 5 ~~~vSVVIP~yNE~~-~i~~~l~~l~~~~~~~~~~~--EIIvVDDgS~D~T----------------------------- 52 (325)
T PRK10714 5 IKKVSVVIPVYNEQE-SLPELIRRTTAACESLGKEY--EILLIDDGSSDNS----------------------------- 52 (325)
T ss_pred CCeEEEEEcccCchh-hHHHHHHHHHHHHHhCCCCE--EEEEEeCCCCCcH-----------------------------
Confidence 467999999999876 8888888764 4666666 9999999999883
Q ss_pred HHHhhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhcCCCEE
Q psy1765 128 IRARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVL 207 (867)
Q Consensus 128 ~~a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A~Gd~l 207 (867)
.+.+.++.+.. ..+++++..+.|.|.++|+|.|+++|+||++
T Consensus 53 -------------------------------------~~il~~~~~~~-~~~v~~i~~~~n~G~~~A~~~G~~~A~gd~v 94 (325)
T PRK10714 53 -------------------------------------AEMLVEAAQAP-DSHIVAILLNRNYGQHSAIMAGFSHVTGDLI 94 (325)
T ss_pred -------------------------------------HHHHHHHHhhc-CCcEEEEEeCCCCCHHHHHHHHHHhCCCCEE
Confidence 33344443322 3578877788899999999999999999999
Q ss_pred EEEcCCcccCccchHHHHHHHHhcCCceeeeEEeeecCCCceeccccccccccccccccccccCCcCcCCCCCCCCCccc
Q psy1765 208 VFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPIL 287 (867)
Q Consensus 208 lfLDaD~~v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~ 287 (867)
+++|+|...+|++++.+++.+.++ .++|++...... +.+.. ......+.+.+ + .+.. ..
T Consensus 95 v~~DaD~q~~p~~i~~l~~~~~~~-~DvV~~~r~~~~-~~~~r---~~~s~~~~~l~--~--~~~g------------~~ 153 (325)
T PRK10714 95 ITLDADLQNPPEEIPRLVAKADEG-YDVVGTVRQNRQ-DSWFR---KTASKMINRLI--Q--RTTG------------KA 153 (325)
T ss_pred EEECCCCCCCHHHHHHHHHHHHhh-CCEEEEEEcCCC-CcHHH---HHHHHHHHHHH--H--HHcC------------CC
Confidence 999999999999999999999755 345554331100 00000 00000111110 0 0000 01
Q ss_pred ccccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEc
Q psy1765 288 SPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIP 338 (867)
Q Consensus 288 ~~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P 338 (867)
.+-..+++.+++|++.+++-.+.+... .+...+...|+++..+|
T Consensus 154 ~~d~~~gfr~~~r~~~~~l~~~~~~~~-------~~~~l~~~~g~~i~evp 197 (325)
T PRK10714 154 MGDYGCMLRAYRRHIVDAMLHCHERST-------FIPILANTFARRAIEIP 197 (325)
T ss_pred CCCCCcCeEEEcHHHHHHHHHCCCCcc-------HHHHHHHHcCCCEEEEE
Confidence 122234566899999999855544211 12234556799998888
|
|
| >KOG2978|consensus | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.1e-15 Score=145.63 Aligned_cols=209 Identities=20% Similarity=0.294 Sum_probs=141.5
Q ss_pred CCcEEEEEEeCCCCh--HHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhH
Q psy1765 51 LPSTSVIICFYNEHP--ATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLI 128 (867)
Q Consensus 51 ~P~vSVIIp~yNe~~--~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 128 (867)
.++-|||+|+|||.. ..+.+.+.-...+.-..+ |||+|||+|.|++
T Consensus 2 ~~kYsvilPtYnEk~Nlpi~~~li~~~~~e~~~~~--eiIivDD~SpDGt------------------------------ 49 (238)
T KOG2978|consen 2 SIKYSVILPTYNEKENLPIITRLIAKYMSEEGKKY--EIIIVDDASPDGT------------------------------ 49 (238)
T ss_pred CcceeEEeccccCCCCCeeeHHHHHhhhhhhcCce--EEEEEeCCCCCcc------------------------------
Confidence 367899999999865 133445555555555566 8888888888883
Q ss_pred HHhhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhcCCCEEE
Q psy1765 129 RARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLV 208 (867)
Q Consensus 129 ~a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A~Gd~ll 208 (867)
.+..++..+.+..++|.++-..+..|++.|.-.|+.+|+|+|++
T Consensus 50 ------------------------------------~~~a~~L~k~yg~d~i~l~pR~~klGLgtAy~hgl~~a~g~fiv 93 (238)
T KOG2978|consen 50 ------------------------------------QEVAKALQKIYGEDNILLKPRTKKLGLGTAYIHGLKHATGDFIV 93 (238)
T ss_pred ------------------------------------HHHHHHHHHHhCCCcEEEEeccCcccchHHHHhhhhhccCCeEE
Confidence 33344443334457999998888999999999999999999999
Q ss_pred EEcCCcccCccchHHHHHHHHhcCCceeeeEEeeecCCCceeccccccccccccccccccccCCcCcCCCCCCCCCcccc
Q psy1765 209 FLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILS 288 (867)
Q Consensus 209 fLDaD~~v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~ 288 (867)
.||+|...+|.++..+++...++.-++|.+.. |.+. .|.+.|.+..+........+.+ ......+
T Consensus 94 iMDaDlsHhPk~ipe~i~lq~~~~~div~GTR---------Ya~~---ggV~gW~mkRk~IS~gAn~la~---~ll~~~~ 158 (238)
T KOG2978|consen 94 IMDADLSHHPKFIPEFIRLQKEGNYDIVLGTR---------YAGG---GGVYGWDMKRKIISRGANFLAR---ILLNPGV 158 (238)
T ss_pred EEeCccCCCchhHHHHHHHhhccCcceeeeee---------EcCC---CceecchhhHHHHhhhhHHHHH---HhccCCC
Confidence 99999999999999999988887656665422 3222 1234466644332211111110 0111234
Q ss_pred cccccceEeEeHHHHHHhCC--CCCCCCCCcccchHHHHHHHHcCCeEEEEcccEEEEEe
Q psy1765 289 PTMAGGLFAIDRQYFDSLGQ--YDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGHVF 346 (867)
Q Consensus 289 ~~~~G~~~airR~~f~~vGg--fDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V~H~~ 346 (867)
.-++|.+=+.+|++++.+=- -..+| -=.+|+..|+.+.|+.|--+|-+.|...+
T Consensus 159 sdltGsFrLykk~vl~~li~e~vSkGy----vfqmEll~ra~~~~y~IgEvPitFvdR~~ 214 (238)
T KOG2978|consen 159 SDLTGSFRLYKKEVLEKLIEESVSKGY----VFQMELLARARQHGYTIGEVPITFVDRTY 214 (238)
T ss_pred ccCcceeeeehHHHHHhhHHHhhccch----hhhHHHHHhccccCceEeecceEEEeecc
Confidence 56778888888888876410 01112 23689999999999999999966555443
|
|
| >cd00161 RICIN Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication | Back alignment and domain information |
|---|
Probab=99.63 E-value=3.4e-15 Score=140.08 Aligned_cols=115 Identities=28% Similarity=0.572 Sum_probs=95.3
Q ss_pred EEecC-CCceEeecCCCCCCCceEEecCCCCCCCccEEEccCCcEEec-cCceeeeCC----CCcEEEecCCCCCCCeEE
Q psy1765 680 IRLSG-TDLCLTSKVDKTKGSPLVLKKCDELSKTQRWSKTDKSELVLA-ELLCLDAGA----TKPKLTKCHEMGGSQEWN 753 (867)
Q Consensus 680 i~~~~-sg~CLd~~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~~~~~~~-s~~CLD~~g----~~v~~~~C~~~~~~Q~W~ 753 (867)
|++.. +++||++.+.. .+..|++++|++...+|+|.+...+.++.. +++|||+.+ +.+++++|++...+|+|.
T Consensus 3 ~~~~~~~~~cL~~~~~~-~~~~v~~~~c~~~~~~Q~W~~~~~g~~~~~~~~~Cl~~~~~~~~~~~~~~~c~~~~~~Q~W~ 81 (124)
T cd00161 3 IRNVNNTGLCLDVNGGS-DGGPVQLYPCHGNGNNQKWTLTSDGTIRIKSSNLCLDVGGDAPGSKVRLYTCSGGSDNQRWT 81 (124)
T ss_pred eEeCCCCCeEEECCCCC-CCCEEEEEECCCCCccCCEEEeCCCeEEEcCCCeEEcccCCCCCCEEEEEECCCCCcCCEEE
Confidence 55555 89999985433 678899999999448999999988877765 689999874 689999999855699999
Q ss_pred EecCCeeeeecCCCCceeecCCCC-CCCeEEEEecCCCCCceEEE
Q psy1765 754 FVLRDKTPIYSPATGTCLGSKNRL-ENTVIVMEMCAQHKDTSWDL 797 (867)
Q Consensus 754 ~~~~~~~~i~n~~sg~CLd~~~~~-~g~~v~~~~C~~~~~Q~W~~ 797 (867)
+...+ .|++.++++|||+.+.. .++.|.+++|+++.+|+|.|
T Consensus 82 ~~~~~--~i~~~~~~~cl~~~~~~~~~~~v~~~~c~~~~~Q~W~~ 124 (124)
T cd00161 82 FNKDG--TIRNLKSGKCLDVKGGNTNGTNLILWTCDGGPNQKWKF 124 (124)
T ss_pred ECCCc--EEEECCCCeEEeCCCCCCCCCEEEEEeCCCCccceEeC
Confidence 98664 38899999999998754 47899999999998999986
|
The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture. |
| >PF00652 Ricin_B_lectin: Ricin-type beta-trefoil lectin domain; InterPro: IPR000772 Ricin is a legume lectin from the seeds of the castor bean plant, Ricinus communis | Back alignment and domain information |
|---|
Probab=99.59 E-value=5.2e-15 Score=139.59 Aligned_cols=115 Identities=29% Similarity=0.517 Sum_probs=93.9
Q ss_pred eEEEecC-CCceEeecCCCCCCCceEEecCCCCCCCccEEEccCCcEEecc--CceeeeCCC----CcEEEecCCCCCCC
Q psy1765 678 FHIRLSG-TDLCLTSKVDKTKGSPLVLKKCDELSKTQRWSKTDKSELVLAE--LLCLDAGAT----KPKLTKCHEMGGSQ 750 (867)
Q Consensus 678 ~~i~~~~-sg~CLd~~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~~~~~~~s--~~CLD~~g~----~v~~~~C~~~~~~Q 750 (867)
+.|++.. +++||++.+....+..|++++|++ ..+|.|.|+..+.++... .+||++.+. .|.+++|+....+|
T Consensus 3 g~i~~~~~~~~cl~~~~~~~~~~~v~l~~c~~-~~~Q~w~~~~~~~i~~~~~~~~CL~~~~~~~~~~i~l~~C~~~~~~Q 81 (124)
T PF00652_consen 3 GYIRNVNKSGLCLDVQGSTKNGSPVVLYPCDG-SDNQLWRFDPDGQIRSNNNPNLCLDVDGSSPGTKIVLWPCDSNSSNQ 81 (124)
T ss_dssp EEEEEEEGGGEEEEEGGSSSTTTBEEEEE--S-SGGGEEEEETTSBEEETTETTEEEEESSSSTTEBEEEEETTTTGGGG
T ss_pred eEEEEeeCCCCeEEEcCCCCCCCEEEEEECCC-CCceeEEEcCCCceeeccCcceEEEeeccCCCceEEEeeccCCccCC
Confidence 5566655 999999964556788999999999 888999999999888653 459999855 49999999876679
Q ss_pred eEEEecCCeeeeecCCCCceeecCCCCCCCeEEEEecCCCCCceE
Q psy1765 751 EWNFVLRDKTPIYSPATGTCLGSKNRLENTVIVMEMCAQHKDTSW 795 (867)
Q Consensus 751 ~W~~~~~~~~~i~n~~sg~CLd~~~~~~g~~v~~~~C~~~~~Q~W 795 (867)
+|.+...+ +|+|..+++||++.+...+..|++++|+++++|+|
T Consensus 82 ~W~~~~~~--~i~n~~s~~cL~~~~~~~~~~l~~~~c~~~~~Q~W 124 (124)
T PF00652_consen 82 RWKFDPDG--RIRNKNSGLCLDVKGGSDGNPLVLWPCNGSPNQQW 124 (124)
T ss_dssp BEEEETTS--BEEETTTTEEEEEGGGSTTEBEEEEE-TSSGGGBE
T ss_pred eEEEcCCe--eEEeCCCCEEEEecCCCCCCEEEEEECCCCccccC
Confidence 99999833 38999999999998755678999999999999999
|
The seeds are poisonous to people, animals and insects and just one milligram of ricin can kill an adult. Primary structure analysis has shown the presence of a similar domain in many carbohydrate-recognition proteins like plant and bacterial AB-toxins, glycosidases or proteases [, , ]. This domain, known as the ricin B lectin domain, can be present in one or more copies and has been shown in some instance to bind simple sugars, such as galactose or lactose. The ricin B lectin domain is composed of three homologous subdomains of 40 amino acids (alpha, beta and gamma) and a linker peptide of around 15 residues (lambda). It has been proposed that the ricin B lectin domain arose by gene triplication from a primitive 40 residue galactoside-binding peptide [, ]. The most characteristic, though not completely conserved, sequence feature is the presence of a Q-W pattern. Consequently, the ricin B lectin domain as also been refered as the (QxW)3 domain and the three homologous regions as the QxW repeats [, ]. A disulphide bond is also conserved in some of the QxW repeats []. The 3D structure of the ricin B chain has shown that the three QxW repeats pack around a pseudo threefold axis that is stabilised by the lambda linker []. The ricin B lectin domain has no major segments of a helix or beta sheet but each of the QxW repeats contains an omega loop []. An idealized omega-loop is a compact, contiguous segment of polypeptide that traces a 'loop-shaped' path in three-dimensional space; the main chain resembles a Greek omega.; PDB: 2VLC_B 3A22_B 3A21_B 3A23_B 1GGP_B 1VCL_A 2Z48_B 2Z49_A 2D7R_A 2D7I_A .... |
| >smart00458 RICIN Ricin-type beta-trefoil | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.1e-14 Score=136.16 Aligned_cols=111 Identities=24% Similarity=0.479 Sum_probs=90.9
Q ss_pred cCCCceEeecCCCCCCCceEEecCCCCCCCccEEEccCCcEEeccCceeeeCC---CCcEEEecCCCCCCCeEEEecCCe
Q psy1765 683 SGTDLCLTSKVDKTKGSPLVLKKCDELSKTQRWSKTDKSELVLAELLCLDAGA---TKPKLTKCHEMGGSQEWNFVLRDK 759 (867)
Q Consensus 683 ~~sg~CLd~~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~~~~~~~s~~CLD~~g---~~v~~~~C~~~~~~Q~W~~~~~~~ 759 (867)
..+++|||+.+. +..+++++|++.+.+|+|.++..+.++..+++|||+.+ +.+++++|++...+|+|.+..++.
T Consensus 4 ~~~~~Cl~~~~~---~~~v~l~~c~~~~~~Q~w~~~~~g~~~~~~~~Cl~~~~~~~~~v~l~~c~~~~~~Q~W~~~~~~~ 80 (117)
T smart00458 4 GNTGKCLDVNGN---SNPVGLFDCHGTGGNQLWKLTSDGAIRIATDLCLTANGNTGSTVTLYSCDGDADNQYWTVNKDGT 80 (117)
T ss_pred ccCCccEecCCC---CceEEEEeCCCCCccceEEEeCCCeEEecCCccCccCCCCCCEEEEEECCCCCcCCEEEECCCee
Confidence 368899998432 15799999998667899999988877654789999886 478999999855699999987443
Q ss_pred eeeecCCCCceeecCCCCCCCeEEEEecCCCCCceEEEe
Q psy1765 760 TPIYSPATGTCLGSKNRLENTVIVMEMCAQHKDTSWDLV 798 (867)
Q Consensus 760 ~~i~n~~sg~CLd~~~~~~g~~v~~~~C~~~~~Q~W~~~ 798 (867)
|+++.+++|||+.+..++..++++.|++.++|+|.|.
T Consensus 81 --i~~~~~~~cl~~~~~~~~~~~~~~~c~~~~~Q~W~~~ 117 (117)
T smart00458 81 --IRNPDSGLCLDVKDGNTGTKVILWTCNGNPNQKWIFE 117 (117)
T ss_pred --EEeCCCCEEEecCCCCCCceEEEEeCCCCccccEEeC
Confidence 8899999999997654445799999999989999873
|
Carbohydrate-binding domain formed from presumed gene triplication. |
| >cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold | Back alignment and domain information |
|---|
Probab=99.58 E-value=3e-14 Score=137.07 Aligned_cols=153 Identities=29% Similarity=0.390 Sum_probs=121.6
Q ss_pred EEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHHHhhhhh
Q psy1765 56 VIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRARMFGA 135 (867)
Q Consensus 56 VIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~a~~~g~ 135 (867)
||||+||+.. .|.++|.|++.++++.. ||+|+||+|++.+
T Consensus 1 iii~~~~~~~-~l~~~l~s~~~~~~~~~--~i~i~~~~~~~~~------------------------------------- 40 (156)
T cd00761 1 VIIPAYNEEP-YLERCLESLLAQTYPNF--EVIVVDDGSTDGT------------------------------------- 40 (156)
T ss_pred CEEeecCcHH-HHHHHHHHHHhCCccce--EEEEEeCCCCccH-------------------------------------
Confidence 6999999765 99999999999988666 9999999998872
Q ss_pred hhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhcCCCEEEEEcCCcc
Q psy1765 136 KYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLVFLDSHIE 215 (867)
Q Consensus 136 ~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A~Gd~llfLDaD~~ 215 (867)
.+.+....+.. ..+.++...++.|.+.++|.|+..+.+|+++++|+|+.
T Consensus 41 -----------------------------~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~d~v~~~d~D~~ 89 (156)
T cd00761 41 -----------------------------LEILEEYAKKD--PRVIRVINEENQGLAAARNAGLKAARGEYILFLDADDL 89 (156)
T ss_pred -----------------------------HHHHHHHHhcC--CCeEEEEecCCCChHHHHHHHHHHhcCCEEEEECCCCc
Confidence 11222222211 35677777789999999999999999999999999999
Q ss_pred cCccchHHHHHHHHhcCC-ceeeeEEeeecCCCceeccccccccccccccccccccCCcCcCCCCCCCCCcccccccccc
Q psy1765 216 VNTHWLEPLLVPIAERTN-TVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMAGG 294 (867)
Q Consensus 216 v~p~wLe~Ll~~l~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~ 294 (867)
+.+++++.++..+..++. .++.+. +
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~v~~~------------------------------------------------------~ 115 (156)
T cd00761 90 LLPDWLERLVAELLADPEADAVGGP------------------------------------------------------G 115 (156)
T ss_pred cCccHHHHHHHHHhcCCCceEEecc------------------------------------------------------c
Confidence 999999998665554443 222210 5
Q ss_pred eEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeE
Q psy1765 295 LFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSL 334 (867)
Q Consensus 295 ~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i 334 (867)
+++++++.|+++|+|++....+ +||.+++.++...|..+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~-~ed~~~~~~~~~~g~~~ 154 (156)
T cd00761 116 NLLFRRELLEEIGGFDEALLSG-EEDDDFLLRLLRGGKVA 154 (156)
T ss_pred hheeeHHHHHHhCCcchHhcCC-cchHHHHHHHHhhcccc
Confidence 6799999999999999988765 89999999998877654
|
Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als |
| >PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.4e-14 Score=173.76 Aligned_cols=204 Identities=12% Similarity=0.093 Sum_probs=135.3
Q ss_pred CCCCCcEEEEEEeCCCChHHHHHHHHHHH-hcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchh
Q psy1765 48 PSTLPSTSVIICFYNEHPATLYRSVQTLL-SRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREG 126 (867)
Q Consensus 48 ~~~~P~vSVIIp~yNe~~~~l~~~l~Svl-~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g 126 (867)
....|.|||+||+|||+. .+.+++++++ .++||++ |||+++|.+++.
T Consensus 59 ~~~~~~vsIlVPa~nE~~-vi~~~i~~ll~~ldYP~~--eI~vi~~~nD~~----------------------------- 106 (727)
T PRK11234 59 KPDEKPLAIMVPAWNETG-VIGNMAELAATTLDYENY--HIFVGTYPNDPA----------------------------- 106 (727)
T ss_pred cCCCCCEEEEEecCcchh-hHHHHHHHHHHhCCCCCe--EEEEEecCCChh-----------------------------
Confidence 355689999999999887 9999999987 6899997 999999866544
Q ss_pred hHHHhhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCC--CcCchhHHhHhhhhc--
Q psy1765 127 LIRARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSK--REGLIRARMFGAKYA-- 202 (867)
Q Consensus 127 i~~a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~--n~G~a~ArN~G~~~A-- 202 (867)
|.+.+++..+++ ++++++..+. +.|++.|.|.|+..+
T Consensus 107 -------------------------------------T~~~~~~l~~~~--p~~~~v~~~~~g~~gKa~aLN~~l~~~~~ 147 (727)
T PRK11234 107 -------------------------------------TQADVDAVCARF--PNVHKVVCARPGPTSKADCLNNVLDAITQ 147 (727)
T ss_pred -------------------------------------HHHHHHHHHHHC--CCcEEEEeCCCCCCCHHHHHHHHHHHHHh
Confidence 244566666655 6676555444 789999999999987
Q ss_pred -----C--CCEEEEEcCCcccCccchHHHHHHHHhcCCcee-eeEEeeecCCCceeccccccccccccccccccccCCcC
Q psy1765 203 -----T--GKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVT-VPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKG 274 (867)
Q Consensus 203 -----~--Gd~llfLDaD~~v~p~wLe~Ll~~l~~~~~~vv-~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~ 274 (867)
. .+++++.|+|+.++|+.|. +++.+.... .+| +|.. ..... ..-.........|.+ .+.. ..+..
T Consensus 148 ~e~~~~~~~~vvvi~DAD~~v~pd~L~-~~~~l~~~~-~~VQ~p~~-p~~~~-~~~~~~~~~~~EFa~--~~~~-~~~~~ 220 (727)
T PRK11234 148 FERSANFAFAGFILHDAEDVISPMELR-LFNYLVERK-DLIQIPVY-PFERE-WTHFTSGTYIDEFAE--LHGK-DVPVR 220 (727)
T ss_pred hhcccCCcccEEEEEcCCCCCChhHHH-HHHhhcCCC-CeEeeccc-CCCcc-HHHHHHHHHHHHHHH--Hhhh-hhHHH
Confidence 3 3568889999999999998 667776443 343 3322 11100 000000000011111 0000 00000
Q ss_pred cCCCCCCCCCcccccccccceEeE-eH--HHHHHhC---CCCCCCCCCcccchHHHHHHHHcCCeEEEEccc
Q psy1765 275 TLNSSEDFIKPILSPTMAGGLFAI-DR--QYFDSLG---QYDAGLEIWGGENLELSFRIWMCGGSLAMIPCS 340 (867)
Q Consensus 275 ~~~~~~~~~~p~~~~~~~G~~~ai-rR--~~f~~vG---gfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s 340 (867)
. .... ...++|..+++ || +++.++| +||++.. .||+|+++|+..+|+++.+.|..
T Consensus 221 ~-----~lgg---~~~l~G~~~af~Rr~l~al~~~ggg~~~~~~~l---TED~dlg~rL~~~G~~v~f~~~~ 281 (727)
T PRK11234 221 E-----ALAG---QVPSAGVGTCFSRRAVTALLEDGDGIAFDVQSL---TEDYDIGFRLKEKGMREIFVRFP 281 (727)
T ss_pred H-----HcCC---CcccCCceEEEecccHHHHHHhcCCCCcCCCcc---hHHHHHHHHHHHCCCEEEEcccc
Confidence 0 0001 12566778899 66 4688888 6998875 69999999999999999999943
|
|
| >COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.2e-14 Score=144.46 Aligned_cols=107 Identities=32% Similarity=0.372 Sum_probs=90.6
Q ss_pred CCcEEEEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHHH
Q psy1765 51 LPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRA 130 (867)
Q Consensus 51 ~P~vSVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~a 130 (867)
+|++|||||+||++. .|.++|.|+++|++.++ |||||||||+|++
T Consensus 2 ~~~~siiip~~n~~~-~l~~~l~s~~~q~~~~~--eiivvddgs~d~t-------------------------------- 46 (291)
T COG0463 2 MPKVSVVIPTYNEEE-YLPEALESLLNQTYKDF--EIIVVDDGSTDGT-------------------------------- 46 (291)
T ss_pred CccEEEEEeccchhh-hHHHHHHHHHhhhhcce--EEEEEeCCCCCCh--------------------------------
Confidence 689999999999875 99999999999999987 9999999999983
Q ss_pred hhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhcCCCEEEEE
Q psy1765 131 RMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLVFL 210 (867)
Q Consensus 131 ~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A~Gd~llfL 210 (867)
.+.+.++.... ..+.......|.|.+.|+|.|+..+.|++++|+
T Consensus 47 ----------------------------------~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 90 (291)
T COG0463 47 ----------------------------------TEIAIEYGAKD--VRVIRLINERNGGLGAARNAGLEYARGDYIVFL 90 (291)
T ss_pred ----------------------------------HHHHHHHhhhc--ceEEEeecccCCChHHHHHhhHHhccCCEEEEE
Confidence 23444444332 357777778899999999999999999999999
Q ss_pred cCCcccCccchHHHHHHHH
Q psy1765 211 DSHIEVNTHWLEPLLVPIA 229 (867)
Q Consensus 211 DaD~~v~p~wLe~Ll~~l~ 229 (867)
|+|.. .+..+..++....
T Consensus 91 d~d~~-~~~~~~~~~~~~~ 108 (291)
T COG0463 91 DADDQ-HPPELIPLVAAGG 108 (291)
T ss_pred ccCCC-CCHHHHHHHHHhh
Confidence 99999 9998888555543
|
|
| >cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide | Back alignment and domain information |
|---|
Probab=99.54 E-value=4.3e-14 Score=148.92 Aligned_cols=101 Identities=21% Similarity=0.234 Sum_probs=86.8
Q ss_pred cEEEEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHHHhh
Q psy1765 53 STSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRARM 132 (867)
Q Consensus 53 ~vSVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~a~~ 132 (867)
+||||||+|||+. .|.+||+||..|+. |||||||||+|++
T Consensus 1 ~isvii~~~Ne~~-~l~~~l~sl~~~~~-----eiivvD~gStD~t---------------------------------- 40 (229)
T cd02511 1 TLSVVIITKNEER-NIERCLESVKWAVD-----EIIVVDSGSTDRT---------------------------------- 40 (229)
T ss_pred CEEEEEEeCCcHH-HHHHHHHHHhcccC-----EEEEEeCCCCccH----------------------------------
Confidence 4899999999876 99999999988742 9999999999883
Q ss_pred hhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhcCCCEEEEEcC
Q psy1765 133 FGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLVFLDS 212 (867)
Q Consensus 133 ~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A~Gd~llfLDa 212 (867)
.+.+. . .+++++.. .+.|++.++|.|+..|++|||+++|+
T Consensus 41 --------------------------------~~i~~----~---~~~~v~~~-~~~g~~~~~n~~~~~a~~d~vl~lDa 80 (229)
T cd02511 41 --------------------------------VEIAK----E---YGAKVYQR-WWDGFGAQRNFALELATNDWVLSLDA 80 (229)
T ss_pred --------------------------------HHHHH----H---cCCEEEEC-CCCChHHHHHHHHHhCCCCEEEEEeC
Confidence 12222 2 36778877 69999999999999999999999999
Q ss_pred CcccCccchHHHHHHHHhcCC
Q psy1765 213 HIEVNTHWLEPLLVPIAERTN 233 (867)
Q Consensus 213 D~~v~p~wLe~Ll~~l~~~~~ 233 (867)
|..++|++++.+++.+.+++.
T Consensus 81 D~~~~~~~~~~l~~~~~~~~~ 101 (229)
T cd02511 81 DERLTPELADEILALLATDDY 101 (229)
T ss_pred CcCcCHHHHHHHHHHHhCCCC
Confidence 999999999999999987764
|
UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core. |
| >PRK05454 glucosyltransferase MdoH; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.4e-13 Score=164.48 Aligned_cols=215 Identities=14% Similarity=0.093 Sum_probs=134.9
Q ss_pred CCCCcEEEEEEeCCCChH----HHHHHHHHHHhcCcc-ccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEecc
Q psy1765 49 STLPSTSVIICFYNEHPA----TLYRSVQTLLSRTGQ-SLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSK 123 (867)
Q Consensus 49 ~~~P~vSVIIp~yNe~~~----~l~~~l~Svl~qt~~-~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (867)
...|+|+||||+|||+.. .|+.+++|+..+.++ ++ ||+|+||+++++. ...+
T Consensus 121 ~~~~~VaVliP~yNEd~~~v~~~L~a~~~Sl~~~~~~~~~--e~~vLdD~~d~~~---~~~e------------------ 177 (691)
T PRK05454 121 PPEARTAILMPIYNEDPARVFAGLRAMYESLAATGHGAHF--DFFILSDTRDPDI---AAAE------------------ 177 (691)
T ss_pred CCCCceEEEEeCCCCChHHHHHHHHHHHHHHHhcCCCCCE--EEEEEECCCChhH---HHHH------------------
Confidence 456899999999999863 688999999998775 56 9999999998872 0000
Q ss_pred chhhHHHhhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcC-CCCEEEEEcCCCcCc-hhHHhHhhhh
Q psy1765 124 REGLIRARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLN-NGRVHLYRTSKREGL-IRARMFGAKY 201 (867)
Q Consensus 124 ~~gi~~a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~-~~~vrii~~~~n~G~-a~ArN~G~~~ 201 (867)
.+.+.+..+++. ..+|.+.+..+|.|. ++..|.+++.
T Consensus 178 -----------------------------------------~~~~~~L~~~~~~~~~i~yr~R~~n~~~KaGNl~~~~~~ 216 (691)
T PRK05454 178 -----------------------------------------EAAWLELRAELGGEGRIFYRRRRRNVGRKAGNIADFCRR 216 (691)
T ss_pred -----------------------------------------HHHHHHHHHhcCCCCcEEEEECCcCCCccHHHHHHHHHh
Confidence 011223333321 257888887777775 3334444666
Q ss_pred --cCCCEEEEEcCCcccCccchHHHHHHHHhcCC-ceeeeEEeeecCCCceeccccccccccccccccccccCCcCcCCC
Q psy1765 202 --ATGKVLVFLDSHIEVNTHWLEPLLVPIAERTN-TVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNS 278 (867)
Q Consensus 202 --A~Gd~llfLDaD~~v~p~wLe~Ll~~l~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~ 278 (867)
+.+||++++|+|..+++++|.+++..+..++. ++|......++.+++...-. .|.-.+.............
T Consensus 217 ~~~~~eyivvLDADs~m~~d~L~~lv~~m~~dP~vGlVQt~~~~~n~~slfaR~q-----qf~~~~y~~~~~~G~~~w~- 290 (691)
T PRK05454 217 WGGAYDYMVVLDADSLMSGDTLVRLVRLMEANPRAGLIQTLPVAVGADTLFARLQ-----QFATRVYGPLFAAGLAWWQ- 290 (691)
T ss_pred cCCCcCEEEEEcCCCCCCHHHHHHHHHHHhhCcCEEEEeCCccCcCCCCHHHHHH-----HHHHHHHHHHHHhhhhhhc-
Confidence 56799999999999999999999999987765 44432111222222110000 0000000000000000000
Q ss_pred CCCCCCcccccccccceEeEeHHHHHHhCCCCC--CCCCCc----ccchHHHHHHHHcCCeEEEEccc
Q psy1765 279 SEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDA--GLEIWG----GENLELSFRIWMCGGSLAMIPCS 340 (867)
Q Consensus 279 ~~~~~~p~~~~~~~G~~~airR~~f~~vGgfDe--~~~~~G----~ED~Dls~Rl~~~G~~i~~~P~s 340 (867)
.......|.+.++||+.|.++||+.+ +...|+ .||++++.+++.+||++.++|+.
T Consensus 291 -------~~~g~f~G~naIiR~~af~~~~glp~L~g~~p~~~~~LseD~~~a~~l~~~GyrV~~~pd~ 351 (691)
T PRK05454 291 -------GGEGNYWGHNAIIRVKAFAEHCGLPPLPGRGPFGGHILSHDFVEAALMRRAGWGVWLAPDL 351 (691)
T ss_pred -------cCccccccceEEEEHHHHHHhcCCccccccCCCCCCcccHHHHHHHHHHHCCCEEEEcCcc
Confidence 01124568889999999999876533 122222 68999999999999999999974
|
|
| >cd00161 RICIN Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication | Back alignment and domain information |
|---|
Probab=99.52 E-value=7.4e-14 Score=130.94 Aligned_cols=117 Identities=30% Similarity=0.549 Sum_probs=92.4
Q ss_pred eeeecC-CCceecccCCCCCCCcEEEEecCCCCCCceeeecCCCceEEe-eceeeecCC----CccEEEeCCCCCCCcce
Q psy1765 549 HIRLSS-TDLCLTSKVDKTKGSPLVLKKCDELSKTQHWSKTDKSELVLA-ELLCLDAGA----TKPKLTKCHEMGGSQEY 622 (867)
Q Consensus 549 ~ir~~~-~~~CLD~~~~~~~g~~v~l~~C~~~~~~Q~w~~t~~~~i~~~-~~~CLd~~g----~~v~l~~C~~~~~~Q~~ 622 (867)
.|++.. +++|||+.+.. .|.+|.+++|++...+|.|.++.+|.++.. .++|||+.+ ..+.+++|++...+|.|
T Consensus 2 ~~~~~~~~~~cL~~~~~~-~~~~v~~~~c~~~~~~Q~W~~~~~g~~~~~~~~~Cl~~~~~~~~~~~~~~~c~~~~~~Q~W 80 (124)
T cd00161 2 TIRNVNNTGLCLDVNGGS-DGGPVQLYPCHGNGNNQKWTLTSDGTIRIKSSNLCLDVGGDAPGSKVRLYTCSGGSDNQRW 80 (124)
T ss_pred eeEeCCCCCeEEECCCCC-CCCEEEEEECCCCCccCCEEEeCCCeEEEcCCCeEEcccCCCCCCEEEEEECCCCCcCCEE
Confidence 345556 89999988754 789999999998867999999999998854 689999875 46899999986666664
Q ss_pred eeeeeeccceeeecccCcccccCCChhhhhhhhhccccCCCCCcccccccccccceEEEecCCCceEeecCCCCCCCceE
Q psy1765 623 WCWLRCKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSGTDLCLTSKVDKTKGSPLV 702 (867)
Q Consensus 623 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~~~~~~~~~i~~~~sg~CLd~~~~~~~g~~v~ 702 (867)
.+ . ..+.|++..+++||++......+..+.
T Consensus 81 -~~--------------------------------------------~-----~~~~i~~~~~~~cl~~~~~~~~~~~v~ 110 (124)
T cd00161 81 -TF--------------------------------------------N-----KDGTIRNLKSGKCLDVKGGNTNGTNLI 110 (124)
T ss_pred -EE--------------------------------------------C-----CCcEEEECCCCeEEeCCCCCCCCCEEE
Confidence 32 1 126788888999999843222677899
Q ss_pred EecCCCCCCCccEEE
Q psy1765 703 LKKCDELSKTQRWSK 717 (867)
Q Consensus 703 l~~C~~~~~~Q~W~~ 717 (867)
+++|++ +.+|+|.|
T Consensus 111 ~~~c~~-~~~Q~W~~ 124 (124)
T cd00161 111 LWTCDG-GPNQKWKF 124 (124)
T ss_pred EEeCCC-CccceEeC
Confidence 999999 69999975
|
The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture. |
| >PF00652 Ricin_B_lectin: Ricin-type beta-trefoil lectin domain; InterPro: IPR000772 Ricin is a legume lectin from the seeds of the castor bean plant, Ricinus communis | Back alignment and domain information |
|---|
Probab=99.51 E-value=3.7e-14 Score=133.80 Aligned_cols=115 Identities=32% Similarity=0.539 Sum_probs=89.7
Q ss_pred eeeeecC-CCceecccCCCCCCCcEEEEecCCCCCCceeeecCCCceEEee--ceeeecCCCc----cEEEeCCCCCCCc
Q psy1765 548 FHIRLSS-TDLCLTSKVDKTKGSPLVLKKCDELSKTQHWSKTDKSELVLAE--LLCLDAGATK----PKLTKCHEMGGSQ 620 (867)
Q Consensus 548 g~ir~~~-~~~CLD~~~~~~~g~~v~l~~C~~~~~~Q~w~~t~~~~i~~~~--~~CLd~~g~~----v~l~~C~~~~~~Q 620 (867)
|.|++.. +++|||+.+....|.+|.|++|++ ..+|.|.++.++.|+... .+||++.+.. +.+++|+....+|
T Consensus 3 g~i~~~~~~~~cl~~~~~~~~~~~v~l~~c~~-~~~Q~w~~~~~~~i~~~~~~~~CL~~~~~~~~~~i~l~~C~~~~~~Q 81 (124)
T PF00652_consen 3 GYIRNVNKSGLCLDVQGSTKNGSPVVLYPCDG-SDNQLWRFDPDGQIRSNNNPNLCLDVDGSSPGTKIVLWPCDSNSSNQ 81 (124)
T ss_dssp EEEEEEEGGGEEEEEGGSSSTTTBEEEEE--S-SGGGEEEEETTSBEEETTETTEEEEESSSSTTEBEEEEETTTTGGGG
T ss_pred eEEEEeeCCCCeEEEcCCCCCCCEEEEEECCC-CCceeEEEcCCCceeeccCcceEEEeeccCCCceEEEeeccCCccCC
Confidence 4566655 999999985556899999999999 668999999999998644 3599998655 8999999866666
Q ss_pred ceeeeeeeccceeeecccCcccccCCChhhhhhhhhccccCCCCCcccccccccccceEEEecCCCceEeecCCCCCCCc
Q psy1765 621 EYWCWLRCKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSGTDLCLTSKVDKTKGSP 700 (867)
Q Consensus 621 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~~~~~~~~~i~~~~sg~CLd~~~~~~~g~~ 700 (867)
.| .|. . .+.|++..+++||++.... .++.
T Consensus 82 ~W-~~~--------------------------------------------~-----~~~i~n~~s~~cL~~~~~~-~~~~ 110 (124)
T PF00652_consen 82 RW-KFD--------------------------------------------P-----DGRIRNKNSGLCLDVKGGS-DGNP 110 (124)
T ss_dssp BE-EEE--------------------------------------------T-----TSBEEETTTTEEEEEGGGS-TTEB
T ss_pred eE-EEc--------------------------------------------C-----CeeEEeCCCCEEEEecCCC-CCCE
Confidence 64 432 1 3689999999999995433 6789
Q ss_pred eEEecCCCCCCCccE
Q psy1765 701 LVLKKCDELSKTQRW 715 (867)
Q Consensus 701 v~l~~C~~~~~~Q~W 715 (867)
|++++|++ +++|+|
T Consensus 111 l~~~~c~~-~~~Q~W 124 (124)
T PF00652_consen 111 LVLWPCNG-SPNQQW 124 (124)
T ss_dssp EEEEE-TS-SGGGBE
T ss_pred EEEEECCC-CccccC
Confidence 99999966 899999
|
The seeds are poisonous to people, animals and insects and just one milligram of ricin can kill an adult. Primary structure analysis has shown the presence of a similar domain in many carbohydrate-recognition proteins like plant and bacterial AB-toxins, glycosidases or proteases [, , ]. This domain, known as the ricin B lectin domain, can be present in one or more copies and has been shown in some instance to bind simple sugars, such as galactose or lactose. The ricin B lectin domain is composed of three homologous subdomains of 40 amino acids (alpha, beta and gamma) and a linker peptide of around 15 residues (lambda). It has been proposed that the ricin B lectin domain arose by gene triplication from a primitive 40 residue galactoside-binding peptide [, ]. The most characteristic, though not completely conserved, sequence feature is the presence of a Q-W pattern. Consequently, the ricin B lectin domain as also been refered as the (QxW)3 domain and the three homologous regions as the QxW repeats [, ]. A disulphide bond is also conserved in some of the QxW repeats []. The 3D structure of the ricin B chain has shown that the three QxW repeats pack around a pseudo threefold axis that is stabilised by the lambda linker []. The ricin B lectin domain has no major segments of a helix or beta sheet but each of the QxW repeats contains an omega loop []. An idealized omega-loop is a compact, contiguous segment of polypeptide that traces a 'loop-shaped' path in three-dimensional space; the main chain resembles a Greek omega.; PDB: 2VLC_B 3A22_B 3A21_B 3A23_B 1GGP_B 1VCL_A 2Z48_B 2Z49_A 2D7R_A 2D7I_A .... |
| >smart00458 RICIN Ricin-type beta-trefoil | Back alignment and domain information |
|---|
Probab=99.44 E-value=6.8e-13 Score=123.94 Aligned_cols=110 Identities=25% Similarity=0.435 Sum_probs=86.6
Q ss_pred CCCceecccCCCCCCCcEEEEecCCCCCCceeeecCCCceEEeeceeeecCC---CccEEEeCCCCCCCcceeeeeeecc
Q psy1765 554 STDLCLTSKVDKTKGSPLVLKKCDELSKTQHWSKTDKSELVLAELLCLDAGA---TKPKLTKCHEMGGSQEYWCWLRCKS 630 (867)
Q Consensus 554 ~~~~CLD~~~~~~~g~~v~l~~C~~~~~~Q~w~~t~~~~i~~~~~~CLd~~g---~~v~l~~C~~~~~~Q~~w~~~~~~~ 630 (867)
.+++|||+.+.. +.|.+++|++...+|.|.|+.+|.++...++|||+.+ ..+.++.|++...+|.| .|.
T Consensus 5 ~~~~Cl~~~~~~---~~v~l~~c~~~~~~Q~w~~~~~g~~~~~~~~Cl~~~~~~~~~v~l~~c~~~~~~Q~W-~~~---- 76 (117)
T smart00458 5 NTGKCLDVNGNS---NPVGLFDCHGTGGNQLWKLTSDGAIRIATDLCLTANGNTGSTVTLYSCDGDADNQYW-TVN---- 76 (117)
T ss_pred cCCccEecCCCC---ceEEEEeCCCCCccceEEEeCCCeEEecCCccCccCCCCCCEEEEEECCCCCcCCEE-EEC----
Confidence 688999987532 6899999998677999999999998754779999886 35789999986677764 321
Q ss_pred ceeeecccCcccccCCChhhhhhhhhccccCCCCCcccccccccccceEEEecCCCceEeecCCCCCCCceEEecCCCCC
Q psy1765 631 FKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSGTDLCLTSKVDKTKGSPLVLKKCDELS 710 (867)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~~~~~~~~~i~~~~sg~CLd~~~~~~~g~~v~l~~C~~~~ 710 (867)
..+.|++..+++|||+...... ..+++++|++ .
T Consensus 77 ---------------------------------------------~~~~i~~~~~~~cl~~~~~~~~-~~~~~~~c~~-~ 109 (117)
T smart00458 77 ---------------------------------------------KDGTIRNPDSGLCLDVKDGNTG-TKVILWTCNG-N 109 (117)
T ss_pred ---------------------------------------------CCeeEEeCCCCEEEecCCCCCC-ceEEEEeCCC-C
Confidence 1367888899999998433322 5799999998 6
Q ss_pred CCccEEEc
Q psy1765 711 KTQRWSKT 718 (867)
Q Consensus 711 ~~Q~W~~~ 718 (867)
++|+|.+.
T Consensus 110 ~~Q~W~~~ 117 (117)
T smart00458 110 PNQKWIFE 117 (117)
T ss_pred ccccEEeC
Confidence 89999873
|
Carbohydrate-binding domain formed from presumed gene triplication. |
| >PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.4e-12 Score=135.72 Aligned_cols=150 Identities=16% Similarity=0.174 Sum_probs=79.4
Q ss_pred CcCchhHHhHhhhhcCCCEEEEEcCCccc-CccchHHHHHHHHhcCCceeeeEEeee--cCCCceecccccccccccccc
Q psy1765 188 REGLIRARMFGAKYATGKVLVFLDSHIEV-NTHWLEPLLVPIAERTNTVTVPIIDII--NADTFQYTSSALVRGGFNWGL 264 (867)
Q Consensus 188 n~G~a~ArN~G~~~A~Gd~llfLDaD~~v-~p~wLe~Ll~~l~~~~~~vv~p~i~~i--~~~~~~~~~~~~~~g~f~~~l 264 (867)
..+.+.|.|.|++.|+++|++||+.|+.+ +++|+..+++.+.+++...+.++.... ........ .....|.. .
T Consensus 39 ~~s~~~~yN~a~~~a~~~ylvflHqDv~i~~~~~l~~il~~~~~~~~~G~iGvaG~~~~~~~~~~w~-~~~~~g~~---~ 114 (217)
T PF13712_consen 39 AKSMAAAYNEAMEKAKAKYLVFLHQDVFIINENWLEDILEIFEEDPNIGMIGVAGSKRLPPNGVWWE-SPNKVGKV---R 114 (217)
T ss_dssp -S-TTTHHHHHGGG--SSEEEEEETTEE-SSHHHHHHHHHHHHH-TTEEEEESEEEESS-S-TTS----EEEEEET---T
T ss_pred CcCHHHHHHHHHHhCCCCEEEEEeCCeEEcchhHHHHHHHHHhhCCCccEEEeecCCcCCCCCcccc-cccccccc---c
Confidence 35788999999999999999999999988 689999999999777764333333221 11000000 00000000 0
Q ss_pred cccc--ccCCcC---cCCC-CCCCCCcccccccccceEeEeHHHHHHhCCCCCC-CCCCcccchHHHHHHHHcCCeEEEE
Q psy1765 265 HFKW--ENLPKG---TLNS-SEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAG-LEIWGGENLELSFRIWMCGGSLAMI 337 (867)
Q Consensus 265 ~~~~--~~~~~~---~~~~-~~~~~~p~~~~~~~G~~~airR~~f~~vGgfDe~-~~~~G~ED~Dls~Rl~~~G~~i~~~ 337 (867)
.... ...+.. ...- ......+.++.++-|.+|+++|+++ +|||. |..|-+-|+|+|++++++|+++ ++
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~avDg~ll~~~~dv~----~fde~~~~gfH~Ydvd~cl~~~~~G~~v-~~ 189 (217)
T PF13712_consen 115 EYGRIMHGHGPNSAGEVRYGGPRNDPPEEVQAVDGLLLATQKDVP----RFDEDLFTGFHFYDVDQCLEARRAGYRV-VV 189 (217)
T ss_dssp EEEE----E-------------ES-SSEEEEEE-TTEEEEETTB---------SS--SSSSHHHHHHHHHHHTT-EE-EE
T ss_pred ccccccccccccccccccccccccCCceeEEEecceEEEEEcccC----CCCccccCCcchHHHHHHHHHHHhCCEE-Ee
Confidence 0000 000000 0000 0011245678889999999999999 99999 6666679999999999999998 55
Q ss_pred cccEEEEEe
Q psy1765 338 PCSRIGHVF 346 (867)
Q Consensus 338 P~s~V~H~~ 346 (867)
+...+.|..
T Consensus 190 ~~~~~~H~s 198 (217)
T PF13712_consen 190 PPPWCIHFS 198 (217)
T ss_dssp -----EE-S
T ss_pred cCceEEEcC
Confidence 668888865
|
|
| >PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=6.5e-13 Score=157.64 Aligned_cols=195 Identities=14% Similarity=0.127 Sum_probs=127.9
Q ss_pred CCCCcEEEEEEeCCCChHHHHHHHHHHH-hcCccccccEEEEE---ECCCCCCCCchhhHHHHHhhcCCCceEEEEeccc
Q psy1765 49 STLPSTSVIICFYNEHPATLYRSVQTLL-SRTGQSLLHEIILV---NDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKR 124 (867)
Q Consensus 49 ~~~P~vSVIIp~yNe~~~~l~~~l~Svl-~qt~~~~~~EiIlV---Dd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (867)
...|.+||+||+|||+. .|.++|++++ .++||++ ||+|+ ||++|
T Consensus 68 ~~~~~vsIlVPa~nE~~-VI~~~v~~ll~~ldYp~~--~I~v~~~~nD~~T----------------------------- 115 (703)
T PRK15489 68 RDEQPLAIMVPAWKEYD-VIAKMIENMLATLDYRRY--VIFVGTYPNDAET----------------------------- 115 (703)
T ss_pred cCCCceEEEEeCCCcHH-HHHHHHHHHHhcCCCCCe--EEEEEecCCCccH-----------------------------
Confidence 45579999999999887 9999999987 6799988 98884 55533
Q ss_pred hhhHHHhhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCC--cCchhHHhHhhhhc
Q psy1765 125 EGLIRARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKR--EGLIRARMFGAKYA 202 (867)
Q Consensus 125 ~gi~~a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n--~G~a~ArN~G~~~A 202 (867)
.+.+++....+ |++++|..+.+ .|++.|.|.|+..+
T Consensus 116 ----------------------------------------~~~~~~~~~~~--p~~~~v~~~~~gp~gKa~ALN~~l~~~ 153 (703)
T PRK15489 116 ----------------------------------------ITEVERMRRRY--KRLVRVEVPHDGPTCKADCLNWIIQAI 153 (703)
T ss_pred ----------------------------------------HHHHHHHhccC--CcEEEEEcCCCCCCCHHHHHHHHHHHH
Confidence 23344444444 57777766544 78999999999875
Q ss_pred -------CCCE--EEEEcCCcccCccchHHHHHHHHhcCCceeeeEEeeecCCCceecccccccccccc--ccccccccC
Q psy1765 203 -------TGKV--LVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNW--GLHFKWENL 271 (867)
Q Consensus 203 -------~Gd~--llfLDaD~~v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~~~~~~~~~~~~g~f~~--~l~~~~~~~ 271 (867)
.++| |++.|+|+.++|+.|..+ +.+..++..+-+|+....+... ....+.|.- ...++. .+
T Consensus 154 ~~~e~~~~~~fa~vvi~DAEd~~~P~~L~~~-~~~~~~~~~iQ~pV~~~~~~~~------~~l~~~~~~Efa~~~~~-~l 225 (703)
T PRK15489 154 FRYEAGHGIEFAGVILHDSEDVLHPLELKYF-NYLLPRKDLVQLPVLSLERKWY------EWVAGTYMDEFAEWHQK-DL 225 (703)
T ss_pred HhhhhhccCccceEEEEcCCCCCChhHHHHH-HhhcCCcceeeeeeccCCCccc------cHHHHHHHHHHHHHhhh-HH
Confidence 3444 899999999999999765 5555555444455543221110 011111100 000000 00
Q ss_pred CcCcCCCCCCCCCcccccccccceEeEeHHHHHHh---C---CCCCCCCCCcccchHHHHHHHHcCCeEEE
Q psy1765 272 PKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSL---G---QYDAGLEIWGGENLELSFRIWMCGGSLAM 336 (867)
Q Consensus 272 ~~~~~~~~~~~~~p~~~~~~~G~~~airR~~f~~v---G---gfDe~~~~~G~ED~Dls~Rl~~~G~~i~~ 336 (867)
+.. .....+ + .++|..+++||++++++ | +||.+.. -||+|+++|+.+.|++..+
T Consensus 226 ~~r-----~~l~~~--i-pl~Gv~~~frr~aL~~l~~~gg~~~~n~~sL---TED~Dlg~RL~~~G~r~~f 285 (703)
T PRK15489 226 VVR-----ESLTGT--V-PSAGVGTCFSRRALLALMKERGNQPFNTSSL---TEDYDFSFRLAELGMQEIF 285 (703)
T ss_pred HHH-----HHcCCc--e-eccCcceeeeHHHHHHHHHhcCCCCCCCCCc---hHhHHHHHHHHHCCCceEE
Confidence 100 001111 2 35677889999998887 5 4776554 6999999999999999988
|
|
| >cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids | Back alignment and domain information |
|---|
Probab=99.19 E-value=3.4e-10 Score=116.14 Aligned_cols=119 Identities=21% Similarity=0.240 Sum_probs=82.8
Q ss_pred CcCchhHHhHhhhhc----CCCEEEEEcCCcccCccchHHHHHHHHhcCCceeeeEEeeecCCCceeccccccccccccc
Q psy1765 188 REGLIRARMFGAKYA----TGKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWG 263 (867)
Q Consensus 188 n~G~a~ArN~G~~~A----~Gd~llfLDaD~~v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~ 263 (867)
.+..+...|.|+..| ..++++|-|.|.++..+++.- .+.+.|. -+++.++ . +
T Consensus 47 ~FNR~~llNvG~~~a~k~~~~dc~i~hDVDllP~~~~~~y---~~~~~p~-H~s~~~~-----~------------~--- 102 (219)
T cd00899 47 RFNRAKLLNVGFLEALKDGDWDCFIFHDVDLLPENDRNLY---GCEEGPR-HLSVPLD-----K------------F--- 102 (219)
T ss_pred cchhhhhhhHHHHHHhhcCCccEEEEecccccccCccccc---cCCCCCe-EEEEeec-----c------------c---
Confidence 355667788887777 357899999999988777541 1122221 1111111 0 0
Q ss_pred cccccccCCcCcCCCCCCCCCcccccccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEcccE--
Q psy1765 264 LHFKWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSR-- 341 (867)
Q Consensus 264 l~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~-- 341 (867)
.++ .| .+.+.||+++++|+.|.+|+|||+.|..||+||.||+.|++.+|.++...+.+.
T Consensus 103 -~~~----------------lp--y~~~~Gg~~~~~k~~f~~VNGf~n~f~GWGgEDdd~~~Rl~~~g~~~~r~~~~~~~ 163 (219)
T cd00899 103 -HYK----------------LP--YKTYFGGVLALTREQFRKVNGFSNAYWGWGGEDDDLYNRIKAAGLKITRPSGDTGR 163 (219)
T ss_pred -ccc----------------cC--cccccccceeeEHHHHHHhCCcCCcCccCCcchHHHHHHHHHCCCeEEeccCcccc
Confidence 000 11 134578999999999999999999999999999999999999999999888643
Q ss_pred EEEEeccC
Q psy1765 342 IGHVFRSR 349 (867)
Q Consensus 342 V~H~~r~~ 349 (867)
+.|++...
T Consensus 164 ~~hL~H~~ 171 (219)
T cd00899 164 YKMIRHIH 171 (219)
T ss_pred eeeeecCC
Confidence 56665443
|
Beta-4-Galactosyltransferase transfers galactose from uridine diphosphogalactose to the terminal beta-N-acetylglucosamine residues, hereby forming the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. At least seven homologous beta-4-galactosyltransferase isoforms have been identified that use different types of glycoproteins and glycolipids as substrates. Of the seven identified members of the beta-1,4-galactosyltransferase subfamily (beta1,4-Gal-T1 to -T7), b1,4-Gal-T1 is most characterized (biochemically). It is a Golgi-resident type II membrane enzyme with a cytoplasmic domain, membrane spanning region, and a stem region and catalytic domain facing the lumen. |
| >PF14200 RicinB_lectin_2: Ricin-type beta-trefoil lectin domain-like; PDB: 2X2S_C 2X2T_A 2VSE_B 2VSA_A 3EF2_A 2IHO_A 3HZB_H 1YBI_B 3PHZ_A 3NBE_A | Back alignment and domain information |
|---|
Probab=99.15 E-value=9e-11 Score=108.06 Aligned_cols=87 Identities=17% Similarity=0.244 Sum_probs=70.0
Q ss_pred CCccEEEcc----CCcEE---eccCceeeeC------CCCcEEEecCCCCCCCeEEEec--CCeeeeecCCCCceeecCC
Q psy1765 711 KTQRWSKTD----KSELV---LAELLCLDAG------ATKPKLTKCHEMGGSQEWNFVL--RDKTPIYSPATGTCLGSKN 775 (867)
Q Consensus 711 ~~Q~W~~~~----~~~~~---~~s~~CLD~~------g~~v~~~~C~~~~~~Q~W~~~~--~~~~~i~n~~sg~CLd~~~ 775 (867)
++|+|+|.. .+... ..+++|||+. |+.|++++|++. .+|+|.+.. ++.+.|.+..+++|||+.+
T Consensus 1 ~nQ~W~~~~~~~~~g~Y~i~n~~sg~~L~v~~~~~~~g~~v~~~~~~~~-~~Q~W~i~~~~~g~y~I~n~~s~~~Ldv~~ 79 (105)
T PF14200_consen 1 DNQQWTFTPVGDSDGYYKIRNVNSGKYLDVAGGSTANGTNVQQWTCNGN-DNQQWKIEPVGDGYYRIRNKNSGKVLDVAG 79 (105)
T ss_dssp CGGEEEEEEEETTTTEEEEEETTTTEEEEEGCTTCSTTEBEEEEESSSS-GGGEEEEEESTTSEEEEEETSTTEEEEEGG
T ss_pred CCCEEEEEEecCCCCEEEEEECCCCCEEEeCCCCcCCCcEEEEecCCCC-cCcEEEEEEecCCeEEEEECCCCcEEEECC
Confidence 479999986 33332 3479999986 448999999984 599999874 4556799999999999976
Q ss_pred CCC--CCeEEEEec-CCCCCceEEEe
Q psy1765 776 RLE--NTVIVMEMC-AQHKDTSWDLV 798 (867)
Q Consensus 776 ~~~--g~~v~~~~C-~~~~~Q~W~~~ 798 (867)
.++ |+.|.+|+| +++++|+|.|+
T Consensus 80 ~~~~~g~~v~~~~~~~~~~~Q~W~l~ 105 (105)
T PF14200_consen 80 GSTANGTNVQQWEYDNGSDNQQWKLE 105 (105)
T ss_dssp GSSSTTEBEEEEE-STSSGGGEEEEE
T ss_pred CCCCCCCEEEEEeCCCCCccCEEEeC
Confidence 544 999999999 88999999984
|
... |
| >PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2 | Back alignment and domain information |
|---|
Probab=99.05 E-value=5.9e-10 Score=113.87 Aligned_cols=124 Identities=16% Similarity=0.232 Sum_probs=81.0
Q ss_pred EEEEEcCCcccCccchHHHHHHHHhcCCceeeeEEeeecCCCceeccccccccccccccccccccCCcCcCCCCCCCCCc
Q psy1765 206 VLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKP 285 (867)
Q Consensus 206 ~llfLDaD~~v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p 285 (867)
||+++|+|+.++|++++.++..+.++..+++.+.+...+..++.. ....+.+..... ... ......
T Consensus 1 ~v~~~DaDt~~~~d~l~~~~~~~~~~~~~~vq~~~~~~~~~~~~~-----~~~~~~~~~~~~----~~~-----~~~~~~ 66 (193)
T PF13632_consen 1 YVLFLDADTRLPPDFLERLVAALEDPKVDAVQGPIIFRNRGSLLT-----RLQDFEYAISHG----LSR-----LSQSSL 66 (193)
T ss_pred CEEEEcCCCCCChHHHHHHHHHHhCCCceEEEccEEecCCCChhh-----eeehhhhhhhhh----hhH-----HHHHhc
Confidence 689999999999999999999999434455544443222111100 000110000000 000 000011
Q ss_pred ccccccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEcccEEEEE
Q psy1765 286 ILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGHV 345 (867)
Q Consensus 286 ~~~~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V~H~ 345 (867)
.....+.|+++++|+++++++|||| ..... +||.|+++|++++|+++.++|++.++|.
T Consensus 67 ~~~~~~~G~~~~~r~~~l~~vg~~~-~~~~~-~ED~~l~~~l~~~G~~~~~~~~~~~~~~ 124 (193)
T PF13632_consen 67 GRPLFLSGSGMLFRREALREVGGFD-DPFSI-GEDMDLGFRLRRAGYRIVYVPDAIVYTE 124 (193)
T ss_pred CCCccccCcceeeeHHHHHHhCccc-ccccc-cchHHHHHHHHHCCCEEEEecccceeee
Confidence 2334577999999999999999999 44444 7999999999999999999999977664
|
|
| >cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides | Back alignment and domain information |
|---|
Probab=99.00 E-value=4e-09 Score=115.65 Aligned_cols=183 Identities=15% Similarity=0.121 Sum_probs=117.1
Q ss_pred EEEEEEeCCCChHHHHHHHHHHHhc--CccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHHHh
Q psy1765 54 TSVIICFYNEHPATLYRSVQTLLSR--TGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRAR 131 (867)
Q Consensus 54 vSVIIp~yNe~~~~l~~~l~Svl~q--t~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~a~ 131 (867)
+.|||++||.+. .|.+||+||+++ +.... ||||++||+.++. .+.++
T Consensus 2 ~PVlv~ayNRp~-~l~r~LesLl~~~p~~~~~--~liIs~DG~~~~~------~~~v~---------------------- 50 (334)
T cd02514 2 IPVLVIACNRPD-YLRRMLDSLLSYRPSAEKF--PIIVSQDGGYEEV------ADVAK---------------------- 50 (334)
T ss_pred cCEEEEecCCHH-HHHHHHHHHHhccccCCCc--eEEEEeCCCchHH------HHHHH----------------------
Confidence 579999999655 999999999998 44455 9999999987651 11111
Q ss_pred hhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcC--------------CCcCchh----
Q psy1765 132 MFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTS--------------KREGLIR---- 193 (867)
Q Consensus 132 ~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~--------------~n~G~a~---- 193 (867)
.+. ..|+++.+. .-.+++.
T Consensus 51 --------------------------------------~~~-----~~i~~i~~~~~~~~~~~~~~~~~~y~~ia~hyk~ 87 (334)
T cd02514 51 --------------------------------------SFG-----DGVTHIQHPPISIKNVNPPHKFQGYYRIARHYKW 87 (334)
T ss_pred --------------------------------------hhc-----cccEEEEcccccccccCcccccchhhHHHHHHHH
Confidence 110 122233221 1134555
Q ss_pred HHhHhhhhcCCCEEEEEcCCcccCcc---chHHHHHHHHhcCCc-eeeeEEeeecCCCceeccccccccccccccccccc
Q psy1765 194 ARMFGAKYATGKVLVFLDSHIEVNTH---WLEPLLVPIAERTNT-VTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWE 269 (867)
Q Consensus 194 ArN~G~~~A~Gd~llfLDaD~~v~p~---wLe~Ll~~l~~~~~~-vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~ 269 (867)
|+|.++..+.++++++|+.|+++.|+ +++.++..++.++.. +|++..+ .+ . . .
T Consensus 88 aln~vF~~~~~~~vIILEDDl~~sPdFf~yf~~~l~~y~~D~~v~~ISa~Nd----nG------------~------~-~ 144 (334)
T cd02514 88 ALTQTFNLFGYSFVIILEDDLDIAPDFFSYFQATLPLLEEDPSLWCISAWND----NG------------K------E-H 144 (334)
T ss_pred HHHHHHHhcCCCEEEEECCCCccCHhHHHHHHHHHHHHhcCCCEEEEEeecc----CC------------c------c-c
Confidence 99999999999999999999999999 557788888877653 3333211 00 0 0 0
Q ss_pred cCCcCcCCCCCCCCCcccccccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHH--HHcCCeEEEEcccEEEEEe
Q psy1765 270 NLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRI--WMCGGSLAMIPCSRIGHVF 346 (867)
Q Consensus 270 ~~~~~~~~~~~~~~~p~~~~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl--~~~G~~i~~~P~s~V~H~~ 346 (867)
... ..+..-+++..+.|...|++|+.|+++ ++.+. .-|.|+.+|. .+.|-.++.=--+|++|..
T Consensus 145 -~~~------~~~~~lyrs~ff~glGWml~r~~W~e~---~~~wp---~~~WD~w~R~~~~rkgr~cirPeisRt~~~g 210 (334)
T cd02514 145 -FVD------DTPSLLYRTDFFPGLGWMLTRKLWKEL---EPKWP---KAFWDDWMRLPEQRKGRECIRPEISRTYHFG 210 (334)
T ss_pred -ccC------CCcceEEEecCCCchHHHHHHHHHHHh---CCCCC---CCChHHhhcchhhhcCCccccCCcchheecc
Confidence 000 001122455667777789999999997 66443 3599999995 3455444433335777765
|
Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13. |
| >KOG2977|consensus | Back alignment and domain information |
|---|
Probab=98.97 E-value=3.5e-09 Score=109.61 Aligned_cols=169 Identities=20% Similarity=0.171 Sum_probs=93.3
Q ss_pred eEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhcCCCEEEEEcCCcc--cC-ccchHHHH
Q psy1765 149 HEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLVFLDSHIE--VN-THWLEPLL 225 (867)
Q Consensus 149 ~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A~Gd~llfLDaD~~--v~-p~wLe~Ll 225 (867)
+|||||||||+| .+.+...++..++...+++++...+|.|.++|.-.|+.+++|++++|.|||-- ++ -..|+..+
T Consensus 105 ~eiiVvddgs~d--~T~~~a~k~s~K~~~d~irV~~l~~nrgKGgAvR~g~l~~rG~~ilfadAdGaTkf~d~ekLe~al 182 (323)
T KOG2977|consen 105 YEIIVVDDGSTD--STVEVALKFSRKLGDDNIRVIKLKKNRGKGGAVRKGMLSSRGQKILFADADGATKFADLEKLEKAL 182 (323)
T ss_pred eeEEEeCCCCch--hHHHHHHHHHHHcCcceEEEeehhccCCCCcceehhhHhccCceEEEEcCCCCccCCCHHHHHHHH
Confidence 344444444444 34555566665565679999999999999999999999999999999999954 43 34555555
Q ss_pred HHHHh-c-CCceeeeEEeeecCCCceecccccccccc----ccccccccccCCcCcCCCCCCCCCcccccccccceEeEe
Q psy1765 226 VPIAE-R-TNTVTVPIIDIINADTFQYTSSALVRGGF----NWGLHFKWENLPKGTLNSSEDFIKPILSPTMAGGLFAID 299 (867)
Q Consensus 226 ~~l~~-~-~~~vv~p~i~~i~~~~~~~~~~~~~~g~f----~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~air 299 (867)
..... . ...++++.-. .++.......+..+ -..+|+.-.......+. .+- .++.++.
T Consensus 183 ~~~~~p~~r~~va~Gsra-----hLe~~~a~a~rs~~r~iLM~gFH~lv~~~a~rsI~-----------DTQ-cgfklft 245 (323)
T KOG2977|consen 183 NDKAGPGPRDDVACGSRA-----HLENTEAVAKRSVIRNILMYGFHKLVWIFAIRSIR-----------DTQ-CGFKLFT 245 (323)
T ss_pred HhhcCCCCCCceeecCHH-----HhhccHHHHHHhHhhHHHHHHHHHHHHHHhcCccc-----------ccc-hhHHHhH
Confidence 55442 2 2233333211 11110000000000 00011100000000010 111 2567888
Q ss_pred HHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEc
Q psy1765 300 RQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIP 338 (867)
Q Consensus 300 R~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P 338 (867)
|....++-.++ .+..| .-|+|+-+=...-+..+..+|
T Consensus 246 R~aa~~if~~l-h~e~W-~fdvEll~La~~~~ipi~ei~ 282 (323)
T KOG2977|consen 246 RAAARRIFPWL-HVERW-AFDVELLYLAKRFTIPIKEIP 282 (323)
T ss_pred HHHHHhhcchh-heeee-eccHHHHHHHHHcCCCcEEee
Confidence 88888886654 45667 668887766666666666555
|
|
| >PF13506 Glyco_transf_21: Glycosyl transferase family 21 | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.2e-09 Score=110.15 Aligned_cols=142 Identities=20% Similarity=0.245 Sum_probs=96.3
Q ss_pred EEEcCCCcC---chhHHhHhhhh-cCCCEEEEEcCCcccCccchHHHHHHHHhcCCceeeeEEeeecCCCceeccccccc
Q psy1765 182 LYRTSKREG---LIRARMFGAKY-ATGKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVR 257 (867)
Q Consensus 182 ii~~~~n~G---~a~ArN~G~~~-A~Gd~llfLDaD~~v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~~~~~~~~~~~~ 257 (867)
++..+...| ++.....|+++ |++|+|+|+|+|+.++|+||..|+..+.+...++|+......+.+++.-.- ..
T Consensus 6 lvv~~~~~g~N~Kv~nL~~~~~~~a~~d~~~~~DsDi~v~p~~L~~lv~~l~~p~vglVt~~~~~~~~~~~~~~l---~~ 82 (175)
T PF13506_consen 6 LVVGGPPRGCNPKVNNLAQGLEAGAKYDYLVISDSDIRVPPDYLRELVAPLADPGVGLVTGLPRGVPARGFWSRL---EA 82 (175)
T ss_pred EEECCCCCCCChHHHHHHHHHHhhCCCCEEEEECCCeeECHHHHHHHHHHHhCCCCcEEEecccccCCcCHHHHH---HH
Confidence 554444444 44566677888 999999999999999999999999999886667776533333233221100 00
Q ss_pred cccccccccccccCCcCcCCCCCCCCCcccccccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEE
Q psy1765 258 GGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMI 337 (867)
Q Consensus 258 g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~ 337 (867)
..+ ..... .... .-..+...|++|++||+.|+++|||+.--. +-.||+.++.++++.|+++...
T Consensus 83 ~~~--~~~~~-------~~~a------~~~~~~~~G~~m~~rr~~L~~~GG~~~l~~-~ladD~~l~~~~~~~G~~v~~~ 146 (175)
T PF13506_consen 83 AFF--NFLPG-------VLQA------LGGAPFAWGGSMAFRREALEEIGGFEALAD-YLADDYALGRRLRARGYRVVLS 146 (175)
T ss_pred HHH--hHHHH-------HHHH------hcCCCceecceeeeEHHHHHHcccHHHHhh-hhhHHHHHHHHHHHCCCeEEEc
Confidence 001 00000 0000 013457889999999999999999987222 2289999999999999999999
Q ss_pred cccEE
Q psy1765 338 PCSRI 342 (867)
Q Consensus 338 P~s~V 342 (867)
|...+
T Consensus 147 ~~~v~ 151 (175)
T PF13506_consen 147 PYPVV 151 (175)
T ss_pred chhee
Confidence 96644
|
|
| >PF01585 G-patch: G-patch domain; InterPro: IPR000467 The D111/G-patch domain [] is a short conserved region of about 40 amino acids which occurs in a number of putative RNA-binding proteins, including tumor suppressor and DNA-damage-repair proteins, suggesting that this domain may have an RNA binding function | Back alignment and domain information |
|---|
Probab=98.94 E-value=5.2e-10 Score=85.69 Aligned_cols=38 Identities=37% Similarity=0.687 Sum_probs=34.3
Q ss_pred CcchHHHHHHhcCCCCCccCCCCCCCCcccccccccccccc
Q psy1765 820 NENKGFRMLSKMGWKAGQTLGKDEANSAALIEPELGLYYDE 860 (867)
Q Consensus 820 ~~~~g~~~~~~~g~~~g~~lg~~~~~~~~~~~p~~~~~~~~ 860 (867)
++|+|++||+||||+||+|||+.. +|+++||....+..
T Consensus 1 t~~~g~~lm~kmGw~~G~GLGk~~---~G~~~pi~~~~~~~ 38 (45)
T PF01585_consen 1 TSSIGFKLMKKMGWKPGQGLGKNG---QGIAEPIEVKKKKD 38 (45)
T ss_pred CCcHHHHHHHHCCCCCCcCCCcCC---ccCCcceEEeeEcC
Confidence 479999999999999999999999 89999998876653
|
This domain has seven highly conserved glycines. A multiple alignment of a small subset of D111/G-patch domains is shown in Fig. 2b of [].; GO: 0003676 nucleic acid binding, 0005622 intracellular |
| >PF02709 Glyco_transf_7C: N-terminal domain of galactosyltransferase; InterPro: IPR003859 This is a family of galactosyltransferases from a wide range of metazoa with three related galactosyltransferase activities; all three of which are possessed by one sequence in some cases | Back alignment and domain information |
|---|
Probab=98.92 E-value=7.4e-10 Score=95.70 Aligned_cols=60 Identities=33% Similarity=0.669 Sum_probs=46.2
Q ss_pred ccccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEcccEE-EEEec
Q psy1765 288 SPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRI-GHVFR 347 (867)
Q Consensus 288 ~~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V-~H~~r 347 (867)
.+.+.||+++++|+.|.+||||||.|..||+||.||+.|++.+|.++..+|.+.+ +|.++
T Consensus 16 ~~~~~Gg~~~~~~~~f~~vnGfde~f~gWG~ED~Dl~~Rl~~~g~~~~~~~~~~~~yh~~~ 76 (78)
T PF02709_consen 16 YPNFFGGVFAISREDFEKVNGFDERFWGWGGEDDDLYNRLWKAGLKIVRVPGSIGRYHLWK 76 (78)
T ss_dssp STT---SEEEEEHHHHHHTTSS-SS-TSCSSHHHHHHHHHHHTT---B-SSTTTTEEEEEE
T ss_pred CCCeeEEEEEEeHHHHHHcCCCCccccccCccHHHHHHHHHHcCCeEEecCCceEEEEEee
Confidence 3577899999999999999999999999999999999999999999998887766 58774
|
The three functions are N-acetyllactosamine synthase (2.4.1.90 from EC); beta-N-acetylglucosaminyl-glycopeptide beta-1,4-galactosyltransferase (2.4.1.38 from EC); and lactose synthase (2.4.1.22 from EC). Note that N-acetyllactosamine synthase is a component of lactose synthase along with alpha-lactalbumin, in the absence of alpha-lactalbumin N-acetyllactosamine synthase is used.; GO: 0016757 transferase activity, transferring glycosyl groups, 0005975 carbohydrate metabolic process; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A .... |
| >COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.92 E-value=9.1e-09 Score=105.06 Aligned_cols=141 Identities=18% Similarity=0.305 Sum_probs=80.5
Q ss_pred hhHHhHhhhhcC----CCEEEEEcCCcccCccchHHHHHHH-----HhcC-CceeeeEEeeecCCCceeccccccccccc
Q psy1765 192 IRARMFGAKYAT----GKVLVFLDSHIEVNTHWLEPLLVPI-----AERT-NTVTVPIIDIINADTFQYTSSALVRGGFN 261 (867)
Q Consensus 192 a~ArN~G~~~A~----Gd~llfLDaD~~v~p~wLe~Ll~~l-----~~~~-~~vv~p~i~~i~~~~~~~~~~~~~~g~f~ 261 (867)
+..+|.|+.+|- .++|+|||.||..+.+-.+.++..+ ..+- +-.|.|+...-..++....... ..|
T Consensus 79 ~~c~n~ga~Ysh~~~~Sn~vlFlDvDc~~S~dnF~k~l~~~~ikk~~tnI~a~~vlPV~~LNk~~~~v~f~~~---d~f- 154 (346)
T COG4092 79 TICANNGADYSHEKCESNLVLFLDVDCFGSSDNFAKMLSIATIKKMRTNIDAPLVLPVYHLNKADTQVFFDVE---DMF- 154 (346)
T ss_pred hhhhhccchhhhccccccEEEEEeccccccHHHHHHHHHHHHHHHHHhccCcceeeeeeecchhhhhHHHHHH---HHh-
Confidence 467888888886 9999999999999866666666443 2332 2345665432111111110000 000
Q ss_pred cccccccccCCcCcCCCCCCCCCcccccccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEcccE
Q psy1765 262 WGLHFKWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSR 341 (867)
Q Consensus 262 ~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~ 341 (867)
|.+......+ .+...... +-.+ ...+.++|.|..|...|||||+|..+|.||+|+.-|+... +...|-..
T Consensus 155 ~d~~i~es~~--~~~~~~~~----ff~~-~~T~~~liN~~~F~~tgGydE~F~GhG~EDfe~~~R~~l~---~~~~p~~~ 224 (346)
T COG4092 155 LDAMIFESPL--AEFRKEDN----FFIA-PYTNIFLINRRMFSLTGGYDERFRGHGSEDFEFLTRLGLY---IKNLPMLT 224 (346)
T ss_pred hhhHhhhhHH--HHhCcccc----cccc-cccceEEEehhHHHHhcCCccccccCCchhHHHHHHHHHH---Hhcccccc
Confidence 1110000000 00000011 1112 2246789999999999999999999999999999998654 34455444
Q ss_pred EEEEe
Q psy1765 342 IGHVF 346 (867)
Q Consensus 342 V~H~~ 346 (867)
--|.+
T Consensus 225 ~nh~y 229 (346)
T COG4092 225 KNHLY 229 (346)
T ss_pred ccccc
Confidence 44544
|
|
| >PF14200 RicinB_lectin_2: Ricin-type beta-trefoil lectin domain-like; PDB: 2X2S_C 2X2T_A 2VSE_B 2VSA_A 3EF2_A 2IHO_A 3HZB_H 1YBI_B 3PHZ_A 3NBE_A | Back alignment and domain information |
|---|
Probab=98.87 E-value=3.9e-09 Score=97.14 Aligned_cols=90 Identities=16% Similarity=0.232 Sum_probs=69.1
Q ss_pred CCcccccccc-cccceEEEecCCCceEee-cCCCCCCCceEEecCCCCCCCccEEEccCC--cEE---eccCceeeeC--
Q psy1765 664 FQPWYSRARN-YTSHFHIRLSGTDLCLTS-KVDKTKGSPLVLKKCDELSKTQRWSKTDKS--ELV---LAELLCLDAG-- 734 (867)
Q Consensus 664 ~q~W~~~~~~-~~~~~~i~~~~sg~CLd~-~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~~--~~~---~~s~~CLD~~-- 734 (867)
.|+|.+.... ....+.|++..+|+||++ +....+|+.|++++|++ ..+|+|.+...+ ... ..+++|||+.
T Consensus 2 nQ~W~~~~~~~~~g~Y~i~n~~sg~~L~v~~~~~~~g~~v~~~~~~~-~~~Q~W~i~~~~~g~y~I~n~~s~~~Ldv~~~ 80 (105)
T PF14200_consen 2 NQQWTFTPVGDSDGYYKIRNVNSGKYLDVAGGSTANGTNVQQWTCNG-NDNQQWKIEPVGDGYYRIRNKNSGKVLDVAGG 80 (105)
T ss_dssp GGEEEEEEEETTTTEEEEEETTTTEEEEEGCTTCSTTEBEEEEESSS-SGGGEEEEEESTTSEEEEEETSTTEEEEEGGG
T ss_pred CCEEEEEEecCCCCEEEEEECCCCCEEEeCCCCcCCCcEEEEecCCC-CcCcEEEEEEecCCeEEEEECCCCcEEEECCC
Confidence 5778776621 233578999999999999 44567889999999999 899999998633 222 3479999985
Q ss_pred ----CCCcEEEec-CCCCCCCeEEEe
Q psy1765 735 ----ATKPKLTKC-HEMGGSQEWNFV 755 (867)
Q Consensus 735 ----g~~v~~~~C-~~~~~~Q~W~~~ 755 (867)
|+.|++|+| ++ ..+|+|.|.
T Consensus 81 ~~~~g~~v~~~~~~~~-~~~Q~W~l~ 105 (105)
T PF14200_consen 81 STANGTNVQQWEYDNG-SDNQQWKLE 105 (105)
T ss_dssp SSSTTEBEEEEE-STS-SGGGEEEEE
T ss_pred CCCCCCEEEEEeCCCC-CccCEEEeC
Confidence 568999999 65 469999973
|
... |
| >KOG3588|consensus | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.8e-07 Score=99.69 Aligned_cols=218 Identities=18% Similarity=0.185 Sum_probs=142.5
Q ss_pred CCCCCcEEEEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhh
Q psy1765 48 PSTLPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGL 127 (867)
Q Consensus 48 ~~~~P~vSVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi 127 (867)
+-..|.|.+|+|...+.. .+.+...++......++ +++||==+++.+.
T Consensus 225 ~i~~pgih~i~pl~gr~~-~f~rf~q~~c~~~d~~l--~l~vv~f~~se~e----------------------------- 272 (494)
T KOG3588|consen 225 LIEDPGIHMIMPLRGRAA-IFARFAQSICARGDDRL--ALSVVYFGYSEDE----------------------------- 272 (494)
T ss_pred cccCCCceEEEeccchHH-HhhhhhHHHhccCCCce--EEEEEEecCCChH-----------------------------
Confidence 345689999999999665 88888888888777777 8777765554330
Q ss_pred HHHhhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhcCCCEE
Q psy1765 128 IRARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVL 207 (867)
Q Consensus 128 ~~a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A~Gd~l 207 (867)
+|. .+.+..+.+.. +++.++-....+..+.|.-.|++.-+.+.+
T Consensus 273 ---------~ak-------------------------~e~~tslra~f--~~~q~l~lngeFSRa~aL~vGAe~~~~nvL 316 (494)
T KOG3588|consen 273 ---------MAK-------------------------RETITSLRASF--IPVQFLGLNGEFSRAKALMVGAETLNANVL 316 (494)
T ss_pred ---------HHh-------------------------hhHHHHHhhcC--CceEEecccchhhhhHHHHhhHHHhcccee
Confidence 000 12334444444 577777776667888899999999877776
Q ss_pred -EEEcCCcccCccchHHHHHHHHhcCCceeeeEEeeecCCCceeccccccccccccccccccccCCcCcCCCCCCCCCcc
Q psy1765 208 -VFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPI 286 (867)
Q Consensus 208 -lfLDaD~~v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~ 286 (867)
.|+|-|..+..++|++.-.-. .-...+..|++...-.....|..... +|..........+...
T Consensus 317 LFfcDVDi~FT~efL~rcr~Nt-~~gkqiyfPivFS~ynp~ivy~~~~~---------------~p~e~~~~~~~~tGfw 380 (494)
T KOG3588|consen 317 LFFCDVDIYFTTEFLNRCRLNT-ILGKQIYFPIVFSQYNPEIVYEQDKP---------------LPAEQQLVIKKDTGFW 380 (494)
T ss_pred EEEeccceeehHHHHHHHhhcc-CCCceEEEEEEEeecCcceeecCCCC---------------CchhHheeeccccccc
Confidence 467999999988887553221 12235667776443222222211100 0000000000000000
Q ss_pred cccccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEcccEEEEEeccCCC
Q psy1765 287 LSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGHVFRSRRP 351 (867)
Q Consensus 287 ~~~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V~H~~r~~~~ 351 (867)
+. .. -|.-.+-|+.|..|||||..+..||+||+||--+..+.|.+++-+|..-+.|+|...+-
T Consensus 381 Rd-fG-fGmtc~yrsd~~~vgGFD~~I~GWG~EDV~Ly~K~v~~~l~viR~p~pGl~H~~H~~~C 443 (494)
T KOG3588|consen 381 RD-FG-FGMTCQYRSDFLTVGGFDMEIKGWGGEDVDLYRKYVHSGLKVIRTPEPGLFHLWHPKRC 443 (494)
T ss_pred cc-cC-CceeEEeeccceeecCcceeeeccCcchHHHHHHHHhcCcEEEecCCCceEEeeccccc
Confidence 10 11 13446679999999999999999999999999999999999999999999999976553
|
|
| >cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans | Back alignment and domain information |
|---|
Probab=98.64 E-value=3.7e-09 Score=116.03 Aligned_cols=58 Identities=69% Similarity=1.190 Sum_probs=55.2
Q ss_pred cccCceeEEEeecchhhhhhhccCcccCCCCccCCchhHhhhhhcccccccccccccc
Q psy1765 452 NYTNSLRVAHVWMDEYIEHFLKQRPEARNIDYGDVTDRKQLRARLGCKSFKWYLDNVY 509 (867)
Q Consensus 452 ~~~N~~R~aeVWmDeyk~~~y~~~p~~~~~~~gdis~r~~LR~~l~CksF~Wyl~nv~ 509 (867)
..+|.+|.+++|||+|++++|+.+|+++.++.||+++|++++++|+||+|+||++.++
T Consensus 242 ~~~n~~r~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~ 299 (299)
T cd02510 242 VLRNYKRVAEVWMDEYKEYFYKARPELRNIDYGDLSERKALRERLKCKSFKWYLENVY 299 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCCHHHHHHHHHHcCCCCchHHHhhcC
Confidence 4679999999999999999999999999999999999999999999999999999764
|
UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins. |
| >smart00443 G_patch glycine rich nucleic binding domain | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.8e-08 Score=78.33 Aligned_cols=37 Identities=43% Similarity=0.816 Sum_probs=33.3
Q ss_pred CCcchHHHHHHhcCCCCCccCCCCCCCCcccccccccccc
Q psy1765 819 PNENKGFRMLSKMGWKAGQTLGKDEANSAALIEPELGLYY 858 (867)
Q Consensus 819 ~~~~~g~~~~~~~g~~~g~~lg~~~~~~~~~~~p~~~~~~ 858 (867)
..+|+|++||+||||++|+|||++. +|+++||.....
T Consensus 2 ~~~~~g~~~l~~mGw~~G~GLG~~~---~g~~~pi~~~~~ 38 (47)
T smart00443 2 STSNIGYKLLRKMGWKEGQGLGKNE---QGIVEPISAEIK 38 (47)
T ss_pred CcccHHHHHHHHcCCCCCCcCCCCC---CcCccceeEeec
Confidence 5689999999999999999999998 899999976544
|
A predicted glycine rich nucleic binding domain found in the splicing factor 45, SON DNA binding protein and D-type Retrovirus- polyproteins. |
| >PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase | Back alignment and domain information |
|---|
Probab=98.56 E-value=3.7e-06 Score=98.38 Aligned_cols=165 Identities=16% Similarity=0.218 Sum_probs=111.3
Q ss_pred hHHHHHHHhhcCCCCEEEEEcC-CCcCchhHHhHhhhhcC-CCEEEEEcCCcccCccchHHHHHHHHhcCCceeeeEEee
Q psy1765 165 HGEVESFVKGLNNGRVHLYRTS-KREGLIRARMFGAKYAT-GKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDI 242 (867)
Q Consensus 165 ~~~l~~~~~~~~~~~vrii~~~-~n~G~a~ArN~G~~~A~-Gd~llfLDaD~~v~p~wLe~Ll~~l~~~~~~vv~p~i~~ 242 (867)
++.+.++..++...++.+|... +.+-.+.|...|++... .++++|+|.|..+++++|.+.-..-.. ..-|..|++-.
T Consensus 301 k~~l~~l~~k~~~~~i~~i~~~~~~fsr~~~Ld~g~~~~~~d~L~f~~Dvd~~f~~~fL~rcR~nti~-g~qvy~PI~Fs 379 (499)
T PF05679_consen 301 KELLEELERKYPFSRIKWISVKTGEFSRGAALDVGAKKFPPDSLLFFCDVDMVFTSDFLNRCRMNTIP-GKQVYFPIVFS 379 (499)
T ss_pred HHHHHHHHHhCCccceEEEEecCCCccHHHHHHhhcccCCCCcEEEEEeCCcccCHHHHHHHHHhhhc-CcEEEEeeecc
Confidence 3455666555545689999988 88889999999998664 567788899999999999877554332 23466776632
Q ss_pred -ecCCCceeccccccccccccccccccccCCcCcCCCCCCCCCcccccccccceEeEeHHHHHHh--CCCCCCCCCCccc
Q psy1765 243 -INADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSL--GQYDAGLEIWGGE 319 (867)
Q Consensus 243 -i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~airR~~f~~v--GgfDe~~~~~G~E 319 (867)
.+++ ..|...+.....+ .+. ....-.+. ..-+.+++=++.|.++ ||||.....||+|
T Consensus 380 ~y~p~-~~~~~~~~~~~~~--------------~i~---~~~G~w~~--~gfg~~~~YksDy~~~~~~~~~~~~~gwg~E 439 (499)
T PF05679_consen 380 QYNPD-IVYAGKPPEPDQF--------------DIS---KDTGFWRR--FGFGMVCFYKSDYMRIRGGGFDLSIRGWGGE 439 (499)
T ss_pred ccCCc-ccccCCCCccccC--------------ccC---CCCCcccc--CCCceEEEEhhhhhhhccccccccccccccc
Confidence 1221 1111100000000 000 00000111 1125678889999999 9999999999999
Q ss_pred chHHHHHHHHcC--CeEEEEcccEEEEEeccCC
Q psy1765 320 NLELSFRIWMCG--GSLAMIPCSRIGHVFRSRR 350 (867)
Q Consensus 320 D~Dls~Rl~~~G--~~i~~~P~s~V~H~~r~~~ 350 (867)
|+||.-++.+.| ..|.-.|+.-+.|+|+.++
T Consensus 440 D~~l~~~~l~~~~~l~V~Ra~ep~L~h~yh~~~ 472 (499)
T PF05679_consen 440 DVDLYDKFLKSGHKLHVFRAVEPGLVHRYHPKH 472 (499)
T ss_pred HHHHHHHHHhCCCceEEEEccCCCeEEEecccC
Confidence 999999999999 8898899999999996654
|
Proteins have a type II transmembrane topology. The enzyme is involved in the biosynthetic initiation and elongation of chondroitin sulphate and is the key enzyme responsible for the selective chain assembly of chondroitin/dermatan sulphate on the linkage region tetrasaccharide common to various proteoglycans containing chondroitin/dermatan sulphate or heparin/heparan sulphate chains. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0032580 Golgi cisterna membrane |
| >KOG0965|consensus | Back alignment and domain information |
|---|
Probab=98.52 E-value=3.4e-08 Score=112.61 Aligned_cols=41 Identities=37% Similarity=0.683 Sum_probs=36.8
Q ss_pred hhcccCCCCcchHHHHHHhcCCCCCccCCCCCCCCccccccccc
Q psy1765 812 AHMEESIPNENKGFRMLSKMGWKAGQTLGKDEANSAALIEPELG 855 (867)
Q Consensus 812 a~~~~~~~~~~~g~~~~~~~g~~~g~~lg~~~~~~~~~~~p~~~ 855 (867)
+.-+..|..+|+|||||+|||||+|+|||..+ +||.+||+.
T Consensus 897 dyke~KLt~dNiGfQMLqKMGWKEGeGLGS~g---kGI~dPVnk 937 (988)
T KOG0965|consen 897 DYKEQKLTDDNIGFQMLQKMGWKEGEGLGSLG---KGIRDPVNK 937 (988)
T ss_pred HHHHhhccccchHHHHHHHhCccccccccccC---cccccchhh
Confidence 34445689999999999999999999999999 899999985
|
|
| >KOG3916|consensus | Back alignment and domain information |
|---|
Probab=98.48 E-value=1.3e-06 Score=92.98 Aligned_cols=54 Identities=26% Similarity=0.527 Sum_probs=46.4
Q ss_pred ccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEcccEEEE
Q psy1765 290 TMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGH 344 (867)
Q Consensus 290 ~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V~H 344 (867)
.+.||..++.++-|.+|.||...|..|||||-|+.-|+..+|++|-- |...+++
T Consensus 259 ~~FGGVsalt~~qf~kINGFsN~fWGWGGEDDDl~nRv~~ag~~IsR-p~~~igr 312 (372)
T KOG3916|consen 259 EYFGGVSALTKEQFRKINGFSNAFWGWGGEDDDLWNRVQLAGMKISR-PPPEIGR 312 (372)
T ss_pred hhhCchhhccHHHHHHhcCCCchhcccCCcchHHHHHHHhcCceeec-CCCccce
Confidence 45588899999999999999999999999999999999999999853 3344444
|
|
| >KOG2547|consensus | Back alignment and domain information |
|---|
Probab=98.32 E-value=4.4e-06 Score=89.92 Aligned_cols=202 Identities=17% Similarity=0.185 Sum_probs=135.9
Q ss_pred CCCCcEEEEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhH
Q psy1765 49 STLPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLI 128 (867)
Q Consensus 49 ~~~P~vSVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 128 (867)
..+|.||||.|.-.... .+..-++|.....|+.+ |++.+-+.++|+.
T Consensus 82 ~~LPgVSiikPl~G~d~-nl~~Nlesffts~Y~~~--ElLfcv~s~eDpA------------------------------ 128 (431)
T KOG2547|consen 82 PKLPGVSIIKPLKGVDP-NLYHNLESFFTSQYHKY--ELLFCVESSEDPA------------------------------ 128 (431)
T ss_pred CCCCCceEEeecccCCc-hhHHhHHHHHhhccCce--EEEEEEccCCCcH------------------------------
Confidence 37899999999988655 89999999999999877 9999998888882
Q ss_pred HHhhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchh---HHhHhhhhcCCC
Q psy1765 129 RARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIR---ARMFGAKYATGK 205 (867)
Q Consensus 129 ~a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~---ArN~G~~~A~Gd 205 (867)
.+.++..+++++.-..+++-..+..|+.- ...-|.+.|+.|
T Consensus 129 ------------------------------------i~vv~~Ll~kyp~VdAklf~gG~~vg~npKInN~mpgy~~a~yd 172 (431)
T KOG2547|consen 129 ------------------------------------IEVVERLLKKYPNVDAKLFFGGEKVGLNPKINNMMPGYRAAKYD 172 (431)
T ss_pred ------------------------------------HHHHHHHHhhCCCcceEEEEcccccccChhhhccCHHHHHhcCC
Confidence 34566777777444668888777777653 333789999999
Q ss_pred EEEEEcCCcccCccchHHHHHHHHhcCCc-eeeeEEeeecCCCceeccccccccccccccccccccCCcCcCCCCCCCCC
Q psy1765 206 VLVFLDSHIEVNTHWLEPLLVPIAERTNT-VTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIK 284 (867)
Q Consensus 206 ~llfLDaD~~v~p~wLe~Ll~~l~~~~~~-vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~ 284 (867)
+|+|.|+|+.+.||-+-.|...+..+... .|...-... .++||+-.+...+....+..+- ...
T Consensus 173 lvlisDsgI~m~pdtildm~t~M~shekmalvtq~py~~------------dr~Gf~atle~~~fgTsh~r~y----l~~ 236 (431)
T KOG2547|consen 173 LVLISDSGIFMKPDTILDMATTMMSHEKMALVTQTPYCK------------DRQGFDATLEQVYFGTSHPRIY----LSG 236 (431)
T ss_pred EEEEecCCeeecCchHHHHHHhhhcccceeeecCCceee------------ccccchhhhhheeeccCCceEE----Ecc
Confidence 99999999999999999999999876653 332211111 2233333222111111000000 000
Q ss_pred cc-cccccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEE
Q psy1765 285 PI-LSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAM 336 (867)
Q Consensus 285 p~-~~~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~ 336 (867)
+. .....+|-.-++||++|++.||+- .+.-|-.||+=+.--+...|++..+
T Consensus 237 n~~~~~c~tgms~~mrK~~ld~~ggi~-~f~~yLaedyFaaksllSRG~ksai 288 (431)
T KOG2547|consen 237 NVLGFNCSTGMSSMMRKEALDECGGIS-AFGGYLAEDYFAAKSLLSRGWKSAI 288 (431)
T ss_pred ccccccccccHHHHHHHHHHHHhccHH-HHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 00 112233444578999999999984 4444446888888778888887543
|
|
| >PF11397 GlcNAc: Glycosyltransferase (GlcNAc); InterPro: IPR021067 GlcNAc is an enzyme that carries out the first glycosylation step of hydroxylated Skp1; it is found in the cytoplasm and results in a pentasaccharide-linked 'HyPro-143[, ] | Back alignment and domain information |
|---|
Probab=97.98 E-value=0.00024 Score=78.78 Aligned_cols=166 Identities=17% Similarity=0.252 Sum_probs=104.3
Q ss_pred CCEEEEEcC--CCcCchhHHhHhhhhcCC-CEEEEEcCCcccCccchHHHHHHHHhc--CCceeeeEEeeecC--CCcee
Q psy1765 178 GRVHLYRTS--KREGLIRARMFGAKYATG-KVLVFLDSHIEVNTHWLEPLLVPIAER--TNTVTVPIIDIINA--DTFQY 250 (867)
Q Consensus 178 ~~vrii~~~--~n~G~a~ArN~G~~~A~G-d~llfLDaD~~v~p~wLe~Ll~~l~~~--~~~vv~p~i~~i~~--~~~~~ 250 (867)
..|++++.+ +-.|...||+.+-+.-.| +|++-+|+|+.+.++|-+.|++.+..- +..|++.....++. .....
T Consensus 88 ~~Ir~~~~~~~~a~Gp~~AR~la~~l~~gE~y~LqiDSH~rF~~~WD~~li~~~~~~~~~~aVLS~YP~~~~~~~~~~~~ 167 (343)
T PF11397_consen 88 DQIRVIRVDASEARGPCWARYLAQKLYRGEDYYLQIDSHMRFVPGWDEILIEMLKSLRNPKAVLSTYPPGYEPDGGQPEP 167 (343)
T ss_pred CeEEEEEeCHHHCcChHHHHHHHHHHhCCCeEEEEEeccceeeccHHHHHHHHHHhcCCCCeEEecCCCCcccccCCccc
Confidence 467776654 568999999999887765 789999999999999999999999864 33444322111111 00000
Q ss_pred ccc---cccccccccccccccccCCcCcCCCCCCCCCcccccccccceEeEeHHHHHHhCCCCCCC--CCCcccchHHHH
Q psy1765 251 TSS---ALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGL--EIWGGENLELSF 325 (867)
Q Consensus 251 ~~~---~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~airR~~f~~vGgfDe~~--~~~G~ED~Dls~ 325 (867)
... ......|.-.-. ..+....+........|...+..++|+++-+-.+..+| .||+.+ ... ||++-++.
T Consensus 168 ~~~~~~~lc~~~~~~~g~---~~~~~~~~~~~~~~~~P~~~~f~aaGF~Fa~~~~~~eV-P~DP~lp~lF~-GEE~~~aa 242 (343)
T PF11397_consen 168 EKTTVPRLCAARFGPDGM---VRLGARWIKPAPKLEEPVPQPFWAAGFSFAPGHFVREV-PYDPHLPFLFD-GEEISMAA 242 (343)
T ss_pred cCCcccEEEEeEECCCCc---EeecceecccccccCCCeeeceecccEEEcchhheecC-CCCCCcccccc-cHHHHHHH
Confidence 000 011111110000 00011111111223356777777777665566655555 799987 434 89999999
Q ss_pred HHHHcCCeEEEEcccEEEEEecc
Q psy1765 326 RIWMCGGSLAMIPCSRIGHVFRS 348 (867)
Q Consensus 326 Rl~~~G~~i~~~P~s~V~H~~r~ 348 (867)
|+|-.||-+..-+.+.++|.|..
T Consensus 243 RlwT~GYD~Y~P~~~v~~H~Y~r 265 (343)
T PF11397_consen 243 RLWTHGYDFYSPTRNVLFHLYSR 265 (343)
T ss_pred HHHHcCCccccCCCceeEEEccC
Confidence 99999999988888899999863
|
|
| >KOG1994|consensus | Back alignment and domain information |
|---|
Probab=97.89 E-value=4.4e-06 Score=83.34 Aligned_cols=38 Identities=34% Similarity=0.590 Sum_probs=32.1
Q ss_pred CCCCcchHHHHHHhcCCCCCccCCCCCCCCcccccccc
Q psy1765 817 SIPNENKGFRMLSKMGWKAGQTLGKDEANSAALIEPEL 854 (867)
Q Consensus 817 ~~~~~~~g~~~~~~~g~~~g~~lg~~~~~~~~~~~p~~ 854 (867)
+|.++|+||++|++||||||..|||++.+..-|+|||-
T Consensus 77 ~i~~e~~gf~lm~~Mg~kpg~~lgkq~e~~~~r~epI~ 114 (268)
T KOG1994|consen 77 GIRAEKPGFSLMNDMGMKPGRFLGKQSEMKNKRLEPIW 114 (268)
T ss_pred cccccCcChHHHHHhCCCccchhcccccccccccccee
Confidence 36699999999999999999999999832234999984
|
|
| >PLN02893 Cellulose synthase-like protein | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00013 Score=86.86 Aligned_cols=171 Identities=13% Similarity=0.150 Sum_probs=101.0
Q ss_pred CCCCcEEEEEEe---CCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchh--hHHHHHh---------hcC-C
Q psy1765 49 STLPSTSVIICF---YNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHG--EVETFVK---------GLN-D 113 (867)
Q Consensus 49 ~~~P~vSVIIp~---yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~--~~~~~~~---------~~~-~ 113 (867)
+++|.|-|.|++ +.|+.-.+..|+-||++-+||.-..-+.|-|||.+.-+ +.+ |..+|++ ++. -
T Consensus 98 ~~lP~vDvfv~TaDP~~Epp~~~~ntvLSilA~dyp~~kls~YvSDDGgs~lt-~~al~Eaa~FA~~WvPFCrk~~ie~R 176 (734)
T PLN02893 98 SDYPGLDVFICTADPYKEPPMGVVNTALSVMAYDYPTEKLSVYVSDDGGSKLT-LFAFMEAAKFATHWLPFCKKNKIVER 176 (734)
T ss_pred ccCCcceeeeccCCcccCchHHHHHHHHHHHhhccCccceEEEEecCCccHHH-HHHHHHHHHHHHhhcccccccCCCcC
Confidence 569999999999 77888899999999999999876557889999876541 111 1122222 000 0
Q ss_pred CceEEEEec------cchhh------HHHhhhhhhhhccccc---------------cccce------eEEEEEeCCCCC
Q psy1765 114 GRVHLYRTS------KREGL------IRARMFGAKYATGKNR---------------IQSLL------HEIILVNDFSEY 160 (867)
Q Consensus 114 ~~~~~~~~~------~~~gi------~~a~~~g~~~a~g~~~---------------~~~~l------~EIIVVDn~Std 160 (867)
++-.|+..+ +++-+ ...|..++... |..- ..+-. -=|=|+-|++.+
T Consensus 177 ~P~~YF~~~~~~~~~e~~~~k~~Yee~k~ri~~~~~~-~~~~~~~~~~~~~~~~f~~w~~~~~~~dH~~ivqV~l~~~~~ 255 (734)
T PLN02893 177 CPEAYFSSNSHSWSPETEQIKMMYESMKVRVENVVER-GKVSTDYITCDQEREAFSRWTDKFTRQDHPTVIQVLLESGKD 255 (734)
T ss_pred CHHHHhccCCCccchHHHHHHHHHHHHHHHHHHHHhc-CcCchhhhhhcccccccccCcCCCCCCCCCceeeeeccCCCc
Confidence 111111111 11111 12222222110 1110 00000 012222233322
Q ss_pred CcCchHHHHHHHhhcCCCCEEEEEcCCC-----cCchhHHhHhhhh----cCCCEEEEEcCCccc-CccchHHHHHHHHh
Q psy1765 161 PSNLHGEVESFVKGLNNGRVHLYRTSKR-----EGLIRARMFGAKY----ATGKVLVFLDSHIEV-NTHWLEPLLVPIAE 230 (867)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~vrii~~~~n-----~G~a~ArN~G~~~----A~Gd~llfLDaD~~v-~p~wLe~Ll~~l~~ 230 (867)
.. ++. ... |.+.++..+++ .-.++|.|.+++. ++|+||+.+|+|..+ +|+.+.+.+-.+.+
T Consensus 256 ~d-----~~g--~~l--P~lvYvsReKrp~~~Hh~KAGaLN~llrvS~~~TngpfIl~lDcD~y~n~p~~l~~amcff~D 326 (734)
T PLN02893 256 KD-----ITG--HTM--PNLIYVSREKSKNSPHHFKAGALNTLLRVSATMTNAPIILTLDCDMYSNDPQTPLRALCYLLD 326 (734)
T ss_pred cc-----hhh--ccC--CceEEEeCCCCCCCCcccccchHHHHHHhhcccCCCCEEEEecCCcCCCchhHHHHHHHHhcC
Confidence 10 111 113 88999998887 4478999999996 689999999999997 68999999888864
|
|
| >PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2 | Back alignment and domain information |
|---|
Probab=97.88 E-value=8.7e-05 Score=86.15 Aligned_cols=133 Identities=11% Similarity=0.087 Sum_probs=76.6
Q ss_pred HhhhhcCCCEEEEEcCCcccCccchHHHHHHHHhcCC-ceeeeEEeeecCCCceeccccccccccccccccccccCCcCc
Q psy1765 197 FGAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAERTN-TVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGT 275 (867)
Q Consensus 197 ~G~~~A~Gd~llfLDaD~~v~p~wLe~Ll~~l~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~ 275 (867)
.|+.....|||+.+|+|+.+.|+.+..|++.+.+++. +.+|+.+. ++...-.. |.......+.-...
T Consensus 195 ~g~~~~~~~~il~~DaDt~~~p~~~~~lv~~m~~d~~i~gvCG~t~-i~n~~~s~-----------~t~~Q~fEY~ish~ 262 (527)
T PF03142_consen 195 IGVDPDFYEYILMVDADTKFDPDSVNRLVDAMERDPKIGGVCGETR-IDNKGQSW-----------WTMYQVFEYAISHH 262 (527)
T ss_pred hccCccceEEEEEecCCceEcHHHHHHHHHHHcCCCCeEEEeceeE-EcCCCCCH-----------hhheeccchhHHHH
Confidence 3666667799999999999999999999999988876 55666443 22211000 00000000000000
Q ss_pred CCCCCCCCCcccccccccceEeEeHHHHHH--------------hCCCCC---------CCCCCcccchHHHHHHHHc--
Q psy1765 276 LNSSEDFIKPILSPTMAGGLFAIDRQYFDS--------------LGQYDA---------GLEIWGGENLELSFRIWMC-- 330 (867)
Q Consensus 276 ~~~~~~~~~p~~~~~~~G~~~airR~~f~~--------------vGgfDe---------~~~~~G~ED~Dls~Rl~~~-- 330 (867)
+.+... ...-.+..+.||+-++|-++... +.+|.+ .+. .-|||--||--+.+.
T Consensus 263 l~Ka~E-s~fG~VtCLPGcfsmyR~~a~~~~~~~~~p~l~~~~i~~~Y~~~~~dtlh~~nl~-~lGEDR~LttLlLk~~~ 340 (527)
T PF03142_consen 263 LQKAFE-SVFGSVTCLPGCFSMYRISALMDGDGYWVPLLISPDIIEKYSENPVDTLHQKNLL-DLGEDRWLTTLLLKQFP 340 (527)
T ss_pred HHHHHH-HHhCceeecCCcceeeeeehhccccccccccccchHHHHHHhhccchHHHHHhhh-hcchhHHHHHHHHhhCC
Confidence 000000 00113456677777777666554 112221 211 238999999777776
Q ss_pred CCeEEEEcccEEE
Q psy1765 331 GGSLAMIPCSRIG 343 (867)
Q Consensus 331 G~~i~~~P~s~V~ 343 (867)
++++.|+|.|...
T Consensus 341 ~~k~~y~~~A~a~ 353 (527)
T PF03142_consen 341 GYKTEYVPSAVAY 353 (527)
T ss_pred CceEEEccccccc
Confidence 7899999988654
|
4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups |
| >KOG2184|consensus | Back alignment and domain information |
|---|
Probab=97.50 E-value=4.7e-05 Score=89.82 Aligned_cols=36 Identities=31% Similarity=0.596 Sum_probs=33.5
Q ss_pred CCcchHHHHHHhcCCCCCccCCCCCCCCccccccccccc
Q psy1765 819 PNENKGFRMLSKMGWKAGQTLGKDEANSAALIEPELGLY 857 (867)
Q Consensus 819 ~~~~~g~~~~~~~g~~~g~~lg~~~~~~~~~~~p~~~~~ 857 (867)
+..++|.+||+|||||||.||||.+ +||++||.+.+
T Consensus 114 ~t~gig~Kll~kMGYkpG~GLGkn~---qGIv~Pieaq~ 149 (767)
T KOG2184|consen 114 GTKGIGAKLLEKMGYKPGKGLGKNA---QGIVAPIEAQL 149 (767)
T ss_pred cccchhHHHHHHcCCccccccCccc---cccccHHhccc
Confidence 4688999999999999999999999 99999999865
|
|
| >KOG2185|consensus | Back alignment and domain information |
|---|
Probab=97.49 E-value=4.4e-05 Score=82.50 Aligned_cols=36 Identities=25% Similarity=0.543 Sum_probs=32.2
Q ss_pred CCcchHHHHHHhcCCCCCccCCCCCCCCccccccccccc
Q psy1765 819 PNENKGFRMLSKMGWKAGQTLGKDEANSAALIEPELGLY 857 (867)
Q Consensus 819 ~~~~~g~~~~~~~g~~~g~~lg~~~~~~~~~~~p~~~~~ 857 (867)
....+|.+||+||||+.|.|||+.+ +||++||.+-.
T Consensus 295 hTRGIgsKLM~kMGY~~G~GLG~~g---~GiV~pI~a~v 330 (486)
T KOG2185|consen 295 HTRGIGSKLMAKMGYREGMGLGVSG---QGIVNPILAKV 330 (486)
T ss_pred ccchHHHHHHHHhchhhccccCcCC---Cccccchhhhh
Confidence 3457999999999999999999999 89999998753
|
|
| >PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0018 Score=68.90 Aligned_cols=152 Identities=20% Similarity=0.193 Sum_probs=88.1
Q ss_pred CCCCcEEEEEEeCCCChHHHHHHHHHHHhcCccccccEE-EEEECCCCCCCCchhhHHHHHhhcCC-CceEEEEeccchh
Q psy1765 49 STLPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEI-ILVNDFSEYPSNLHGEVETFVKGLND-GRVHLYRTSKREG 126 (867)
Q Consensus 49 ~~~P~vSVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~Ei-IlVDd~S~d~s~~~~~~~~~~~~~~~-~~~~~~~~~~~~g 126 (867)
...++|=|++|..| +.+++.+.++.|.+.+||..+..| .||.|.++.+ ...+.|+.+++.+.. +.
T Consensus 22 ~~~e~VLILtplrn-a~~~l~~y~~~L~~L~YP~~lIsLgfLv~d~~e~d-~t~~~l~~~~~~~q~~~~----------- 88 (269)
T PF03452_consen 22 RNKESVLILTPLRN-AASFLPDYFDNLLSLTYPHELISLGFLVSDSSEFD-NTLKILEAALKKLQSHGP----------- 88 (269)
T ss_pred ccCCeEEEEEecCC-chHHHHHHHHHHHhCCCCchheEEEEEcCCCchhH-HHHHHHHHHHHHHhccCc-----------
Confidence 34578999999999 556999999999999999887777 5666666444 223444444432211 00
Q ss_pred hHHHhhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhcC---
Q psy1765 127 LIRARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYAT--- 203 (867)
Q Consensus 127 i~~a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A~--- 203 (867)
....+..|.++-....+... ...-.++ ...+ ....+.-+++|||..+..|-
T Consensus 89 -----------------~~~~F~~itIl~~df~~~~~-----~~~~~RH---~~~~-Q~~RR~~mAraRN~LL~~aL~p~ 142 (269)
T PF03452_consen 89 -----------------ESKRFRSITILRKDFGQQLS-----QDRSERH---AFEV-QRPRRRAMARARNFLLSSALGPW 142 (269)
T ss_pred -----------------ccCCcceEEEEcCCCccccc-----Cchhhcc---chhh-HHHHHHHHHHHHHHHHHhhcCCc
Confidence 00111223333211111000 0000000 1111 11125568999999988884
Q ss_pred CCEEEEEcCCccc-CccchHHHHHHHHhcCCceeeeEEeee
Q psy1765 204 GKVLVFLDSHIEV-NTHWLEPLLVPIAERTNTVTVPIIDII 243 (867)
Q Consensus 204 Gd~llfLDaD~~v-~p~wLe~Ll~~l~~~~~~vv~p~i~~i 243 (867)
.+|+++||+|++- +|+.|+.|+ .+...+|+|.+...
T Consensus 143 ~swVlWlDaDIv~~P~~lI~dli----~~~kdIivPn~~~~ 179 (269)
T PF03452_consen 143 HSWVLWLDADIVETPPTLIQDLI----AHDKDIIVPNCWRR 179 (269)
T ss_pred ccEEEEEecCcccCChHHHHHHH----hCCCCEEccceeec
Confidence 4999999999985 566665554 46667888876443
|
These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes []. |
| >KOG2809|consensus | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.00012 Score=78.48 Aligned_cols=37 Identities=32% Similarity=0.601 Sum_probs=31.7
Q ss_pred CCcchHHHHHHhcCCCCCccCCCCCCCCcccccccccccc
Q psy1765 819 PNENKGFRMLSKMGWKAGQTLGKDEANSAALIEPELGLYY 858 (867)
Q Consensus 819 ~~~~~g~~~~~~~g~~~g~~lg~~~~~~~~~~~p~~~~~~ 858 (867)
+.+--|++||.||||++|.|||+.. +|++.||.--++
T Consensus 24 d~~~fg~KlLekmGW~eG~GLG~~~---qG~~~~IKvs~K 60 (326)
T KOG2809|consen 24 DDSRFGKKLLEKMGWSEGDGLGKNE---QGITDPIKVSLK 60 (326)
T ss_pred cchHHHHHHHHHcCCccCCcccccc---cCCccceEEEec
Confidence 4445799999999999999999998 899999975543
|
|
| >KOG3673|consensus | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.00014 Score=81.39 Aligned_cols=35 Identities=34% Similarity=0.403 Sum_probs=32.4
Q ss_pred CcchHHHHHHhcCCCCCccCCCCCCCCccccccccccc
Q psy1765 820 NENKGFRMLSKMGWKAGQTLGKDEANSAALIEPELGLY 857 (867)
Q Consensus 820 ~~~~g~~~~~~~g~~~g~~lg~~~~~~~~~~~p~~~~~ 857 (867)
..|+..+||+||||+.|+||||.+ |||.|||.+-.
T Consensus 82 y~~va~~lMakMG~~~geGLGK~~---QGr~epi~as~ 116 (845)
T KOG3673|consen 82 YLTVAERLMAKMGHKAGEGLGKHG---QGRSEPIAAST 116 (845)
T ss_pred cchHHHHHHHHhCccccccccccC---CCccchhhhhh
Confidence 578999999999999999999999 99999998753
|
|
| >KOG1996|consensus | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.00028 Score=73.36 Aligned_cols=31 Identities=32% Similarity=0.443 Sum_probs=27.0
Q ss_pred hHHHHHHhcCCCCCccCCCCCCCCcccccccccc
Q psy1765 823 KGFRMLSKMGWKAGQTLGKDEANSAALIEPELGL 856 (867)
Q Consensus 823 ~g~~~~~~~g~~~g~~lg~~~~~~~~~~~p~~~~ 856 (867)
...+||+|||||+|+||||++ ||+..|+..+
T Consensus 214 vA~~im~k~G~keGqGLGKsE---QGlsTalsve 244 (378)
T KOG1996|consen 214 VAHKIMQKYGFKEGQGLGKSE---QGLSTALSVE 244 (378)
T ss_pred HHHHHHHHhCcccccCcCccc---cccccceeee
Confidence 567999999999999999999 8988776544
|
|
| >KOG4368|consensus | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.00058 Score=76.97 Aligned_cols=36 Identities=44% Similarity=0.834 Sum_probs=32.4
Q ss_pred cCCCCcchHHHHHHhcCCCCCccCCCCCCCCccccccccc
Q psy1765 816 ESIPNENKGFRMLSKMGWKAGQTLGKDEANSAALIEPELG 855 (867)
Q Consensus 816 ~~~~~~~~g~~~~~~~g~~~g~~lg~~~~~~~~~~~p~~~ 855 (867)
+.|.++|||.+||+||||. |.|||..+ +||..||..
T Consensus 682 ~~lse~NKGhQml~KMGWs-G~GLGak~---qGI~DPiSG 717 (757)
T KOG4368|consen 682 APLGEENKGHQMLVKMGWS-GSGLGAKE---QGIQDPISG 717 (757)
T ss_pred CccccccchhhhHhhcCcc-cCCccccc---ccccCcccC
Confidence 3488999999999999997 99999999 999999863
|
|
| >PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.021 Score=64.84 Aligned_cols=202 Identities=15% Similarity=0.111 Sum_probs=91.1
Q ss_pred CCCcEEEEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHH
Q psy1765 50 TLPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIR 129 (867)
Q Consensus 50 ~~P~vSVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~ 129 (867)
..|.+-|+|.+||.+. .|.+||+||++..+..-..-|||-.||+... ..+.++.+.++ +.+++.-
T Consensus 91 ~~~~~pVlV~AcNRp~-yl~r~L~sLl~~rp~~~~fpIiVSQDg~~~~------~~~vi~~y~~~-v~~i~~~------- 155 (434)
T PF03071_consen 91 KEPVIPVLVFACNRPD-YLRRTLDSLLKYRPSAEKFPIIVSQDGDDEE------VAEVIKSYGDQ-VTYIQHP------- 155 (434)
T ss_dssp ------EEEEESS-TT--HHHHHHHHHHH-S-TTTS-EEEEE-TT-HH------HHHHHHGGGGG-SEEEE-S-------
T ss_pred CCCcceEEEEecCCcH-HHHHHHHHHHHcCCCCCCccEEEEecCCcHH------HHHHHHHhhhh-heeeecC-------
Confidence 4567889999999765 9999999999965443223799988887554 22333322111 1111110
Q ss_pred HhhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCC--------CcCchhHHhHhhhh
Q psy1765 130 ARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSK--------REGLIRARMFGAKY 201 (867)
Q Consensus 130 a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~--------n~G~a~ArN~G~~~ 201 (867)
|- ..+.+...++ ...+..|.+.-+..
T Consensus 156 -------------------------~~---------------------~~i~~~~~~~~~~~y~~IA~HYk~aL~~vF~~ 189 (434)
T PF03071_consen 156 -------------------------DF---------------------SPITIPPKEKKFKGYYKIARHYKWALSQVFNK 189 (434)
T ss_dssp ------------------------------------------------S-----TT-GGGHHHHHHHHHHHHHHHHHHHT
T ss_pred -------------------------Cc---------------------CCceeCcccccccchHHHHHHHHHHHHHHHHh
Confidence 00 0111110000 01122344444444
Q ss_pred cCCCEEEEEcCCcccCccchHHHHH---HHHhcCCc-eeeeEEeeecCCCceeccccccccccccccccccccCCcCcCC
Q psy1765 202 ATGKVLVFLDSHIEVNTHWLEPLLV---PIAERTNT-VTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLN 277 (867)
Q Consensus 202 A~Gd~llfLDaD~~v~p~wLe~Ll~---~l~~~~~~-vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~ 277 (867)
-..+.++++..|.++.||+++=+.+ .+..++.. +|++.. +.+.. ...
T Consensus 190 ~~~~~vIIlEDDL~isPDFf~Yf~~~~~ll~~D~sl~ciSawN----dnG~~-------------------------~~~ 240 (434)
T PF03071_consen 190 FKYSSVIILEDDLEISPDFFEYFSATLPLLENDPSLWCISAWN----DNGKE-------------------------HFV 240 (434)
T ss_dssp S--SEEEEEETTEEE-TTHHHHHHHHHHHHHH-TTEEEEES------TT-BG-------------------------GGS
T ss_pred cCCceEEEEecCcccCccHHHHHHHHHHHHhcCCCeEEEEccc----cCCcc-------------------------ccc
Confidence 4678999999999999998865444 44555543 333211 11000 000
Q ss_pred CCCCCCCcccccccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHH--HHHcCCeEEEEcccEEEEEec
Q psy1765 278 SSEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFR--IWMCGGSLAMIPCSRIGHVFR 347 (867)
Q Consensus 278 ~~~~~~~p~~~~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~R--l~~~G~~i~~~P~s~V~H~~r 347 (867)
....+...+++..+.|=..|++|+.|+++.. . |-..-.|-.+| ....|-.++.=--+|.+|..+
T Consensus 241 ~~~~~~~lyRsdffpglGWml~r~~w~el~~---~---Wp~~~WDdwmR~~~~rkgR~cIrPeisRt~~fg~ 306 (434)
T PF03071_consen 241 DDSRPSLLYRSDFFPGLGWMLTRELWDELEP---K---WPKAFWDDWMRQPEQRKGRQCIRPEISRTYHFGK 306 (434)
T ss_dssp -TT-TT-EEEESS---SSEEEEHHHHHHHGG---G-----SS-HHHHHTSHHHHTT-EEEEESSBSEEE--S
T ss_pred cCCCccceEecccCCchHHHhhHHHHHhhcc---c---CCCCCchhhhcCccccCCCceeeccCCCccccCc
Confidence 0011223356777777779999999998752 1 22233577777 344554454433356777543
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A. |
| >PF13896 Glyco_transf_49: Glycosyl-transferase for dystroglycan | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.011 Score=65.47 Aligned_cols=150 Identities=16% Similarity=0.186 Sum_probs=93.2
Q ss_pred CcCchhHHhHhhhhcCCCEEEEEcCCcccCccchHHHHHHHHhc----CCceeeeEEeeecCCCceecccc----cccc-
Q psy1765 188 REGLIRARMFGAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAER----TNTVTVPIIDIINADTFQYTSSA----LVRG- 258 (867)
Q Consensus 188 n~G~a~ArN~G~~~A~Gd~llfLDaD~~v~p~wLe~Ll~~l~~~----~~~vv~p~i~~i~~~~~~~~~~~----~~~g- 258 (867)
-.-+...||.|...|+.++++.+|.|..++++.-+.+++.+... ..+.|.|....-....+...... ...|
T Consensus 112 ~YPiN~LRNvAr~~a~T~~v~~~DvD~~ps~~l~~~l~~~~~~~~~~~~~a~VvPaFE~~~~~~~P~~K~eL~~~~~~~~ 191 (317)
T PF13896_consen 112 LYPINLLRNVARSGARTDYVFLLDVDFLPSPGLYEKLLRFARRNIDKSKTAFVVPAFETREGADIPRTKKELLELLKNGK 191 (317)
T ss_pred CCChHHHHHHHHHhcCcceEEEecceeeeCcchHHHHHHHhhhhccCCceEEEEeeeecccCcCCCCCHHHHHHHHHhCc
Confidence 45567899999999999999999999999999888888777643 34667787754333221111000 0001
Q ss_pred --ccc---c------ccccccccCCcCcCCCCCCCCCccccccccc--ceEeEeHHHHHHhCCCCCCCCCCcccchHHHH
Q psy1765 259 --GFN---W------GLHFKWENLPKGTLNSSEDFIKPILSPTMAG--GLFAIDRQYFDSLGQYDAGLEIWGGENLELSF 325 (867)
Q Consensus 259 --~f~---~------~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~G--~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~ 325 (867)
.|. | .-.-+|...+... ....++.+.+-.+ ..+.++| .+-.|||.|..||..-+-...
T Consensus 192 ~~~Fh~~~~~~~h~~t~~~~W~~~~~~~-----~~~~~y~v~~~~~~EP~~I~~~----~~P~yDErF~~yg~nk~s~~~ 262 (317)
T PF13896_consen 192 ARPFHHKVCPQGHGPTNYDRWFSAPESD-----ELDVPYEVKYEDGWEPYYIGRR----NVPLYDERFRGYGFNKISQIY 262 (317)
T ss_pred hhhccccccccCcCCccHHHHhccCCcC-----CCcceEEEccCCCccCEEEccC----CCCCCcccccccccchHHHHH
Confidence 011 0 0011232221110 0011111111100 1223333 567899999999999999999
Q ss_pred HHHHcCCeEEEEcccEEEEEe
Q psy1765 326 RIWMCGGSLAMIPCSRIGHVF 346 (867)
Q Consensus 326 Rl~~~G~~i~~~P~s~V~H~~ 346 (867)
-+..+||+..++|.+.+.|..
T Consensus 263 eL~~~gy~F~VL~~aFlVH~~ 283 (317)
T PF13896_consen 263 ELCAAGYRFHVLPNAFLVHRP 283 (317)
T ss_pred HHHHcCCEEEEcCCeeEEecC
Confidence 999999999999999999974
|
|
| >PF12656 G-patch_2: DExH-box splicing factor binding site | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.0013 Score=56.55 Aligned_cols=34 Identities=35% Similarity=0.735 Sum_probs=28.4
Q ss_pred CCCcchHHHHHHhcCCCCCccCCCCCCCCcccccccc
Q psy1765 818 IPNENKGFRMLSKMGWKAGQTLGKDEANSAALIEPEL 854 (867)
Q Consensus 818 ~~~~~~g~~~~~~~g~~~g~~lg~~~~~~~~~~~p~~ 854 (867)
+.-++-|.+||+.|||++|+++|++. ++.++|+.
T Consensus 27 vPVe~FG~AlLRGMGW~~~~~~g~~~---~~~~~~~~ 60 (77)
T PF12656_consen 27 VPVEEFGAALLRGMGWKPGEGIGKNK---KKSVKPVE 60 (77)
T ss_pred CCHHHHHHHHHHHcCCCCCCCCCCCc---ccccCccc
Confidence 45567999999999999999999998 56666654
|
|
| >PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2 | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.015 Score=52.36 Aligned_cols=32 Identities=22% Similarity=0.037 Sum_probs=23.1
Q ss_pred CCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCC
Q psy1765 61 YNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYP 97 (867)
Q Consensus 61 yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~ 97 (867)
+||+. .|.+.|...++.-. .+|+|+||+|+|+
T Consensus 1 rne~~-~L~~wl~~~~~lG~----d~i~i~d~~s~D~ 32 (97)
T PF13704_consen 1 RNEAD-YLPEWLAHHLALGV----DHIYIYDDGSTDG 32 (97)
T ss_pred CChHH-HHHHHHHHHHHcCC----CEEEEEECCCCcc
Confidence 47665 88888888765532 2678888888887
|
|
| >PF03498 CDtoxinA: Cytolethal distending toxin A/C family; InterPro: IPR003558 Escherichia coli, Haemophilus spp and Campylobacter spp | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.0058 Score=59.59 Aligned_cols=74 Identities=24% Similarity=0.322 Sum_probs=48.9
Q ss_pred cCceeeeCCCCcEEEe-cCCCCCCCeEEEe--cCCeeeeecCCCCceeecCCCCC---CCeEEEEecCCC----CCceEE
Q psy1765 727 ELLCLDAGATKPKLTK-CHEMGGSQEWNFV--LRDKTPIYSPATGTCLGSKNRLE---NTVIVMEMCAQH----KDTSWD 796 (867)
Q Consensus 727 s~~CLD~~g~~v~~~~-C~~~~~~Q~W~~~--~~~~~~i~n~~sg~CLd~~~~~~---g~~v~~~~C~~~----~~Q~W~ 796 (867)
++.||.+.+..+...+ |+.+...|.|.+. .+|..+|++.++++||.+..... ...+.+..|+.. ..|+|.
T Consensus 61 ~~~CL~~~~~G~~~~~~C~~~~~~q~F~iiPtttgAVQIks~~~~~Cl~~~~~~~~~~~~~i~l~~Cd~~~~~~l~~lw~ 140 (150)
T PF03498_consen 61 TGTCLAAYGNGVFHYKSCDQDNLEQVFSIIPTTTGAVQIKSLSTGECLQTFNNSRTPIYYSIGLTPCDKSKEINLDQLWF 140 (150)
T ss_dssp TSEEEEEETTCEEEE--TTTCHGHH-EEEEEBTTS-EEEEETTT--EEEE-STTSS-SSEEEEEE---S-EEETGGGEEE
T ss_pred CCcceeecCCCeEeecccCCCChhceEEEEEcCCCcEEEEecCCCceEEecCCCceeEEeeEEeeeCCCcCCCCHHHcEE
Confidence 5779999777777777 9987667999876 56778899999999999865432 457999999433 239999
Q ss_pred EecC
Q psy1765 797 LVPV 800 (867)
Q Consensus 797 ~~~~ 800 (867)
|.|.
T Consensus 141 itPP 144 (150)
T PF03498_consen 141 ITPP 144 (150)
T ss_dssp EE--
T ss_pred EcCC
Confidence 9874
|
all produce a toxin that is seen to cause distension in certain cell lines [, ], which eventually disintegrate and die. This novel toxin, termed cytolethal distending toxin (cdt), has three subunits: A, B and C. Their sizes are approx. 27.7, 29.5 and 19.9kDa respectively [], and they appear to be entirely novel []. Further research on the complete toxin has revealed that it blocks the cell cycle at stage G2, through inactivation of the cyclin-dependent kinase Cdk1, and without induction of DNA breaks. This leads to multipolar abortive mitosis and micronucleation, associated with centrosomal amplification []. The roles of each subunit are unclear, but it is believed that they have separate roles in pathogenicity. This entry represents the A and C subunits.; GO: 0009405 pathogenesis; PDB: 2F2F_A 1SR4_C. |
| >KOG2384|consensus | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.0033 Score=62.24 Aligned_cols=38 Identities=26% Similarity=0.524 Sum_probs=34.5
Q ss_pred CCCcchHHHHHHhcCCCCCccCCCCCCCCcccccccccccc
Q psy1765 818 IPNENKGFRMLSKMGWKAGQTLGKDEANSAALIEPELGLYY 858 (867)
Q Consensus 818 ~~~~~~g~~~~~~~g~~~g~~lg~~~~~~~~~~~p~~~~~~ 858 (867)
|.++|.||++|.+-||.|+.|||..+ +|+..||-.-++
T Consensus 125 i~pks~GyrLl~~~GW~pe~GLGp~~---~Grr~PvrTvlk 162 (223)
T KOG2384|consen 125 IKPKSLGYRLLSQYGWSPEAGLGPEN---QGRRAPVRTVLK 162 (223)
T ss_pred CCCCCchHHHHHhcCCCcccCCCccc---cCcccchhHHHh
Confidence 78999999999999999999999999 899999976543
|
|
| >COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.16 Score=57.80 Aligned_cols=141 Identities=13% Similarity=0.158 Sum_probs=76.4
Q ss_pred CCEEEEEcCCCcCchhHHhHhh-hh--cCCCEEEEEcCCcccCccchHHHHHHHHhcCCceeeeEE-eeecCCCceecc-
Q psy1765 178 GRVHLYRTSKREGLIRARMFGA-KY--ATGKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPII-DIINADTFQYTS- 252 (867)
Q Consensus 178 ~~vrii~~~~n~G~a~ArN~G~-~~--A~Gd~llfLDaD~~v~p~wLe~Ll~~l~~~~~~vv~p~i-~~i~~~~~~~~~- 252 (867)
.+|-+-+..+|.|.-+++-.-+ +. ...++++.||+|..+..+.+.+|++.++.+|...+.-.+ ..++++++-...
T Consensus 212 ~~ifYRrRr~n~~RKaGNIaDfcrRwG~~Y~~MlVLDADSvMtgd~lvrLv~~ME~~P~aGlIQt~P~~~gg~TL~AR~q 291 (736)
T COG2943 212 GNIFYRRRRRNVKRKAGNIADFCRRWGSAYSYMLVLDADSVMTGDCLVRLVRLMEANPDAGLIQTSPKASGGDTLYARCQ 291 (736)
T ss_pred CceeeehHhhhhcccccCHHHHHHHhCcccceEEEeecccccCchHHHHHHHHHhhCCCCceeecchhhcCcchHHHHHH
Confidence 3555555554544333222211 11 246999999999999999999999999999875432111 223444432111
Q ss_pred -------ccccccccccccccccccCCcCcCCCCCCCCCcccccccccceEeEeHHHHHHhCCCCCC--CCCCcc----c
Q psy1765 253 -------SALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAG--LEIWGG----E 319 (867)
Q Consensus 253 -------~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~airR~~f~~vGgfDe~--~~~~G~----E 319 (867)
++...-|..| |. .. -....|.+-.||.+.|-+.-|..+- -..+|| -
T Consensus 292 QFatrvYGpl~~~GLaw-----W~-~~---------------Es~yWGHNAIIRt~aF~~hcgLp~LpG~~pFgG~ilSH 350 (736)
T COG2943 292 QFATRVYGPLFTAGLAW-----WQ-LG---------------ESHYWGHNAIIRTKAFIEHCGLPPLPGRGPFGGHILSH 350 (736)
T ss_pred HHHHHHhchHHhhhhHH-----Hh-cc---------------ccccccccceeechhhHHhcCCCCCCCCCCCCccccch
Confidence 1111111111 11 00 0133466777888888887665431 112222 2
Q ss_pred chHHHHHHHHcCCeEEEEcc
Q psy1765 320 NLELSFRIWMCGGSLAMIPC 339 (867)
Q Consensus 320 D~Dls~Rl~~~G~~i~~~P~ 339 (867)
|+-=+-=++++|+.+.+.|+
T Consensus 351 DfvEAALmRRaGW~v~ia~d 370 (736)
T COG2943 351 DFVEAALMRRAGWGVWIAYD 370 (736)
T ss_pred HHHHHHHHhhcCceEEEecc
Confidence 33223337788998887774
|
|
| >PLN02195 cellulose synthase A | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.42 Score=59.02 Aligned_cols=177 Identities=16% Similarity=0.163 Sum_probs=97.6
Q ss_pred CCCCcEEEEEEeCC---CChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchh--hHHHHHh--------------
Q psy1765 49 STLPSTSVIICFYN---EHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHG--EVETFVK-------------- 109 (867)
Q Consensus 49 ~~~P~vSVIIp~yN---e~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~--~~~~~~~-------------- 109 (867)
+.+|.|-|.|++-+ |+.-....|+-||++-+||.-..-+.|-|||.+.-+ +.+ |..+|++
T Consensus 249 s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LT-f~AL~EAa~FA~~WvPFCkK~~IepR 327 (977)
T PLN02195 249 SQLAAVDFFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLS-FESLVETAEFARKWVPFCKKYSIEPR 327 (977)
T ss_pred ccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHH-HHHHHHHHHHHHhhcccccccCCCcC
Confidence 56999999999964 666689999999999999976557889999976541 111 1122222
Q ss_pred ---hcCCCceEEE-------Eeccchhh------HHHhhhhhhhhccccccccceeEEEEEeCCCCCCc----CchHHHH
Q psy1765 110 ---GLNDGRVHLY-------RTSKREGL------IRARMFGAKYATGKNRIQSLLHEIILVNDFSEYPS----NLHGEVE 169 (867)
Q Consensus 110 ---~~~~~~~~~~-------~~~~~~gi------~~a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~----~~~~~l~ 169 (867)
+.+.+..... ...+++-+ ...|+.++..-. ..+..|.-...|++.-|. +-..++.
T Consensus 328 aPe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~k~RIe~~~~~~-----~~~~~~~~~m~d~t~W~g~~~~dHp~IIq 402 (977)
T PLN02195 328 APEFYFSQKIDYLKDKVQPSFVKERRAMKRDYEEYKVRVNALVAKA-----QKTPEEGWTMQDGTPWPGNNTRDHPGMIQ 402 (977)
T ss_pred CHHHHhccCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhc-----ccCCcccccccCCccCCCCCCCCCcchhh
Confidence 1111111111 01111111 122222222100 011111111222221000 0000011
Q ss_pred HHHh--------hcCCCCEEEEEcCCCcC-----chhHHhHhhhhc----CCCEEEEEcCCcccCc-cchHHHHHHHHhc
Q psy1765 170 SFVK--------GLNNGRVHLYRTSKREG-----LIRARMFGAKYA----TGKVLVFLDSHIEVNT-HWLEPLLVPIAER 231 (867)
Q Consensus 170 ~~~~--------~~~~~~vrii~~~~n~G-----~a~ArN~G~~~A----~Gd~llfLDaD~~v~p-~wLe~Ll~~l~~~ 231 (867)
-.+. ...-|.+.+|..+++.| .++|+|.+++.+ .|+||+.||+|..+++ ++|.+.+-.|...
T Consensus 403 Vll~~~~~~d~~g~~lP~LVYVSREKrPg~~Hh~KAGamNallrvSavmTNap~il~lDcDmy~n~s~~lr~AMCf~~D~ 482 (977)
T PLN02195 403 VFLGETGARDIEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVNNSKAVREAMCFLMDP 482 (977)
T ss_pred hhccCCCCcccccccCceeEEEeccCCCCCCcccccchhHHHHHHhhhccCCCeEEEecCccccCcHHHHHHHHhhccCc
Confidence 1100 00127888888888877 578999999854 6999999999998855 7999988887643
|
|
| >KOG0154|consensus | Back alignment and domain information |
|---|
Probab=94.94 E-value=0.013 Score=70.21 Aligned_cols=44 Identities=39% Similarity=0.538 Sum_probs=39.4
Q ss_pred cCCCCcchHHHHHHhcCCCCCccCCCCCCCCcccccccccccccccc
Q psy1765 816 ESIPNENKGFRMLSKMGWKAGQTLGKDEANSAALIEPELGLYYDELK 862 (867)
Q Consensus 816 ~~~~~~~~g~~~~~~~g~~~g~~lg~~~~~~~~~~~p~~~~~~~~~~ 862 (867)
-+|+.+|+|.+||++|||+.|+|||+.. +|+++||.+.-+...+
T Consensus 507 ~~~~~sn~~~~~l~~~gw~~g~Glg~~~---~g~~~~~e~~~~~~~~ 550 (573)
T KOG0154|consen 507 PPIDTSNVGNRMLQSMGWKEGSGLGKKN---QGIKEPIEAEGRDRGA 550 (573)
T ss_pred ccCCCCccchhhhhccCccccccccccc---CCCcccccccccccCC
Confidence 4589999999999999999999999999 8999999987766543
|
|
| >PLN02189 cellulose synthase | Back alignment and domain information |
|---|
Probab=94.85 E-value=0.15 Score=63.22 Aligned_cols=181 Identities=15% Similarity=0.171 Sum_probs=103.0
Q ss_pred CCCCcEEEEEEeC---CCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchh--hHHHHHhh---------cC-C
Q psy1765 49 STLPSTSVIICFY---NEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHG--EVETFVKG---------LN-D 113 (867)
Q Consensus 49 ~~~P~vSVIIp~y---Ne~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~--~~~~~~~~---------~~-~ 113 (867)
+.+|.|-|.|++- .|+.-.+..|+-||++-+||.-..-+.|-|||.+.-+ +.+ |..+|++. +. -
T Consensus 328 ~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LT-f~AL~EAa~FA~~WvPFCkK~~IepR 406 (1040)
T PLN02189 328 NMLSPVDIFVSTVDPLKEPPLVTANTVLSILAMDYPVDKISCYVSDDGASMLT-FEALSETAEFARKWVPFCKKFSIEPR 406 (1040)
T ss_pred ccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHHH-HHHHHHHHHHHHhhcccccccCCCcC
Confidence 4599999999996 4676689999999999999976557889999876541 111 11222220 00 0
Q ss_pred CceEEEEecc-------c-hhhHHHhhhhhhhhcccccc-------ccceeEEEEEeCCCCCCc----CchHHHHHHHhh
Q psy1765 114 GRVHLYRTSK-------R-EGLIRARMFGAKYATGKNRI-------QSLLHEIILVNDFSEYPS----NLHGEVESFVKG 174 (867)
Q Consensus 114 ~~~~~~~~~~-------~-~gi~~a~~~g~~~a~g~~~~-------~~~l~EIIVVDn~Std~~----~~~~~l~~~~~~ 174 (867)
++-.|+-.+. . +-+.+-+...-++-.-...+ ..+..|--+.+||+.-|. +-..++.-.+..
T Consensus 407 aPe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~kvRI~~l~a~~~~~p~~~~~m~dGt~W~g~~~~dHp~IiQVll~~ 486 (1040)
T PLN02189 407 APEFYFSLKVDYLKDKVQPTFVKERRAMKREYEEFKVRINAIVAKAQKVPPEGWIMQDGTPWPGNNTRDHPGMIQVFLGH 486 (1040)
T ss_pred CHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCccCCccceeccCccCCCCCCCCCHHHHHHHhcC
Confidence 1111111100 0 00111111111111111111 112234455678872110 011122222221
Q ss_pred --------cCCCCEEEEEcCCCcC-----chhHHhHhhhh----cCCCEEEEEcCCcccC-ccchHHHHHHHHh
Q psy1765 175 --------LNNGRVHLYRTSKREG-----LIRARMFGAKY----ATGKVLVFLDSHIEVN-THWLEPLLVPIAE 230 (867)
Q Consensus 175 --------~~~~~vrii~~~~n~G-----~a~ArN~G~~~----A~Gd~llfLDaD~~v~-p~wLe~Ll~~l~~ 230 (867)
..-|.+.+|..+++.| .|+|+|..++. ..|+||+.||+|..++ +..|...+-.|..
T Consensus 487 ~~~~d~~g~~lP~LVYVSREKrPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmY~Nns~alr~AMCfflD 560 (1040)
T PLN02189 487 SGGHDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLMD 560 (1040)
T ss_pred CCCccccccccceeEEEeccCCCCCCcccchhhHHHHHHHhhhccCCCeEEEccCccccCchHHHHHhhhhhcC
Confidence 0125688888888877 68999999955 4799999999999995 6999998888874
|
|
| >PLN02638 cellulose synthase A (UDP-forming), catalytic subunit | Back alignment and domain information |
|---|
Probab=94.01 E-value=0.61 Score=58.23 Aligned_cols=177 Identities=16% Similarity=0.200 Sum_probs=102.8
Q ss_pred CCCCcEEEEEEeCC---CChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchh--hHHHHHh--------------
Q psy1765 49 STLPSTSVIICFYN---EHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHG--EVETFVK-------------- 109 (867)
Q Consensus 49 ~~~P~vSVIIp~yN---e~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~--~~~~~~~-------------- 109 (867)
+.+|.|-|.|++-+ |+.-.+..||-||++-+||.-..-+.|-|||.+.-+ +.+ |..+|++
T Consensus 346 s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LT-f~AL~EAa~FA~~WvPFCkK~~IepR 424 (1079)
T PLN02638 346 SQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLT-FEALSETSEFARKWVPFCKKYNIEPR 424 (1079)
T ss_pred ccCCCccEEEeCCCCccCccHHHHHHHHHHHhhcccccceeEEEecCCchHHH-HHHHHHHHHHHHhhcccccccCCCcC
Confidence 45999999999964 666689999999999999976557889999976541 111 1122222
Q ss_pred ---hcCCCceEEE-------Eeccchhh------HHHhhhhhhhhccccccccceeEEEEEeCCCCCCc----CchHHHH
Q psy1765 110 ---GLNDGRVHLY-------RTSKREGL------IRARMFGAKYATGKNRIQSLLHEIILVNDFSEYPS----NLHGEVE 169 (867)
Q Consensus 110 ---~~~~~~~~~~-------~~~~~~gi------~~a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~----~~~~~l~ 169 (867)
+.+.+.+... ...+++-+ ...|+.++.+-. ..+..|--+.+||+.-|. +-..++.
T Consensus 425 aPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~a~~-----~~~p~~~~~m~dgt~W~g~~~~dHp~Iiq 499 (1079)
T PLN02638 425 APEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKVRINGLVAKA-----QKVPEEGWIMQDGTPWPGNNTRDHPGMIQ 499 (1079)
T ss_pred CHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhc-----cccCCccccccCCccCCCCCCCCCHHHHH
Confidence 1111111110 01111111 112222221110 112223344566761100 0011222
Q ss_pred HHHhh--------cCCCCEEEEEcCCCcC-----chhHHhHhhhhc----CCCEEEEEcCCcccC-ccchHHHHHHHHhc
Q psy1765 170 SFVKG--------LNNGRVHLYRTSKREG-----LIRARMFGAKYA----TGKVLVFLDSHIEVN-THWLEPLLVPIAER 231 (867)
Q Consensus 170 ~~~~~--------~~~~~vrii~~~~n~G-----~a~ArN~G~~~A----~Gd~llfLDaD~~v~-p~wLe~Ll~~l~~~ 231 (867)
-.+.. ..-|.+.+|..+++.| .|+|+|..++.+ .|+||+.||+|..++ |..+...+-.|...
T Consensus 500 Vll~~~~~~d~~g~~lP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmYiNns~alr~AMCf~lDp 579 (1079)
T PLN02638 500 VFLGHSGGLDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFLMDP 579 (1079)
T ss_pred HHhcCCCccccccccccceEEEecccCCCCCcccccchHHHHHHHhhhccCCCeEeecccCcccCchHHHHHhhhhhcCc
Confidence 22210 0126778888888877 689999999655 899999999999885 99999998887643
|
|
| >KOG2571|consensus | Back alignment and domain information |
|---|
Probab=93.98 E-value=0.19 Score=61.31 Aligned_cols=139 Identities=11% Similarity=-0.008 Sum_probs=77.6
Q ss_pred chhHHhHhhhhcCC--CEEEEEcCCcccCccchHHHHHHHHhcCC-ceeeeEEeeecCCCceeccccccccccccccccc
Q psy1765 191 LIRARMFGAKYATG--KVLVFLDSHIEVNTHWLEPLLVPIAERTN-TVTVPIIDIINADTFQYTSSALVRGGFNWGLHFK 267 (867)
Q Consensus 191 ~a~ArN~G~~~A~G--d~llfLDaD~~v~p~wLe~Ll~~l~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~ 267 (867)
+=-..+........ +||+++|+|+.+.|+.|-.|++.++.++. +.+|+.|....+.-+.. ...|...+.+
T Consensus 426 ~r~~~y~~~~~L~~~v~~il~vD~dT~~~P~ai~~lv~~f~~dp~VggaCG~I~~~~~~w~v~------~Q~FEY~Ish- 498 (862)
T KOG2571|consen 426 HRWVMYTAFKALMPSVDYILVVDADTRLDPDALYHLVKVFDEDPQVGGACGRILNKGGSWVVA------YQNFEYAISH- 498 (862)
T ss_pred HHHHHHHHHHHhcCcceEEEEecCCCccCcHHHHHHHHHhccCcccceeccccccCCCceEEe------HHHHHHHHHH-
Confidence 33445555555544 46699999999999999999999998876 66677553322211100 0001110100
Q ss_pred cccCCcCcCCCCCCCCCcccccccccceEeEeHHHHHHhC-------CCCC---CCCCCcccchHHHHHHHHcCCeEEEE
Q psy1765 268 WENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSLG-------QYDA---GLEIWGGENLELSFRIWMCGGSLAMI 337 (867)
Q Consensus 268 ~~~~~~~~~~~~~~~~~p~~~~~~~G~~~airR~~f~~vG-------gfDe---~~~~~G~ED~Dls~Rl~~~G~~i~~~ 337 (867)
|. .+.. ....-.+..+.|++-++|-+++..-- .+.+ ..+--=+||-=||.++...||.+.|+
T Consensus 499 ~l-------~Ka~-ESvFG~VsclPGcfs~yR~~aL~~~~~~~~y~~~~~~~~~~~~~~~geDR~L~~~llskgy~l~Y~ 570 (862)
T KOG2571|consen 499 NL-------QKAT-ESVFGCVSCLPGCFSLYRASALMDQFVEYFYGEKFSGPRHGIQYSLGEDRWLCTLLLSKGYRLKYV 570 (862)
T ss_pred HH-------HHhh-hhhceeEEecCchhHHHHHHHHhcchHHhhhchhhcCcccccccccchhHHHHHHHHhccceeeee
Confidence 00 0000 00011234555666666664433211 0111 00001179999999999999999999
Q ss_pred cccEEEE
Q psy1765 338 PCSRIGH 344 (867)
Q Consensus 338 P~s~V~H 344 (867)
+.|...-
T Consensus 571 a~s~a~t 577 (862)
T KOG2571|consen 571 AASDAET 577 (862)
T ss_pred ccccccc
Confidence 9877653
|
|
| >KOG3917|consensus | Back alignment and domain information |
|---|
Probab=93.88 E-value=0.06 Score=54.58 Aligned_cols=45 Identities=24% Similarity=0.389 Sum_probs=42.0
Q ss_pred ccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeE
Q psy1765 290 TMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSL 334 (867)
Q Consensus 290 ~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i 334 (867)
.+.||.++++++-|.++.|+...|-.||-||-||-+||..+|..+
T Consensus 180 ~fvGGILll~~~hyk~~NGMSN~yWGWGlEDDEFy~RI~dagLql 224 (310)
T KOG3917|consen 180 KFVGGILLLTLKHYKKLNGMSNKYWGWGLEDDEFYLRIIDAGLQL 224 (310)
T ss_pred hhcceeEEeeHHHHHHhcCccccccccCcccchhhheeccccceE
Confidence 567899999999999999999999999999999999999999765
|
|
| >KOG2138|consensus | Back alignment and domain information |
|---|
Probab=92.57 E-value=0.059 Score=62.71 Aligned_cols=21 Identities=43% Similarity=1.045 Sum_probs=19.6
Q ss_pred CcchHHHHHHhcCCCCCccCC
Q psy1765 820 NENKGFRMLSKMGWKAGQTLG 840 (867)
Q Consensus 820 ~~~~g~~~~~~~g~~~g~~lg 840 (867)
.+.+|++||.||||++|+|+|
T Consensus 147 s~sIgvrlLrsMGWr~GqgIg 167 (883)
T KOG2138|consen 147 SDSIGVRLLRSMGWREGQGIG 167 (883)
T ss_pred hhhHHHHHHHHhcCccCCCcC
Confidence 457999999999999999999
|
|
| >PF09488 Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); InterPro: IPR012812 This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP), comprises a two-step pathway for mannosylglycerate biosynthesis | Back alignment and domain information |
|---|
Probab=91.68 E-value=0.79 Score=50.36 Aligned_cols=130 Identities=21% Similarity=0.213 Sum_probs=65.3
Q ss_pred CCcEEEEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCC-CchhhHHHHHhhcC--CCceEEEEeccchhh
Q psy1765 51 LPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPS-NLHGEVETFVKGLN--DGRVHLYRTSKREGL 127 (867)
Q Consensus 51 ~P~vSVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s-~~~~~~~~~~~~~~--~~~~~~~~~~~~~gi 127 (867)
+-...||||+-||....| +-||.--|.+- =||||-|.+..+- ..+.+.+ -++.+- -.|-.++..++.-|+
T Consensus 49 l~~maIVVP~KnE~l~ll----eGVL~gIPh~C--~IIvVSNS~r~~~d~f~~E~d-~l~~f~~~t~r~~~~vHQkDp~l 121 (381)
T PF09488_consen 49 LSKMAIVVPCKNEKLKLL----EGVLSGIPHDC--LIIVVSNSSREPVDRFKMEVD-LLKHFCRLTRRQIIIVHQKDPGL 121 (381)
T ss_dssp HTTEEEEEEESS--HHHH----HHHHHCS-TTS--EEEEEE---CSSSCHHHHHHH-HHHHHHHHCT--EEEEETT-HHH
T ss_pred HhCcEEEEECCCCchhhh----hhhhhcCCCCC--eEEEEECCCCCCccHHHHHHH-HHHHHHHhhcCceEEEecCCHHH
Confidence 457999999999887444 44444445444 7889988887431 1111111 122221 134556777778777
Q ss_pred HHHhhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhc---CC
Q psy1765 128 IRARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYA---TG 204 (867)
Q Consensus 128 ~~a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A---~G 204 (867)
+.|-..+= = .+.+... .. | +-|.+.++-.|+..| ..
T Consensus 122 A~Af~~aG----y----------------------------~~il~~~--g~---V----R~GKgEGMiiGillAk~~g~ 160 (381)
T PF09488_consen 122 AEAFKEAG----Y----------------------------PEILDED--GL---V----RNGKGEGMIIGILLAKAPGK 160 (381)
T ss_dssp HHHHHHTT----------------------------------TTB-TT--SS---B-----SSHHHHHHHHHHHHHHTT-
T ss_pred HHHHHHcC----c----------------------------HHHhCCC--Cc---e----ecCchHHHHHHHHHHHhcCC
Confidence 77632111 0 0001000 11 2 457788888886655 56
Q ss_pred CEEEEEcCCcccCccchHHHHHHHH
Q psy1765 205 KVLVFLDSHIEVNTHWLEPLLVPIA 229 (867)
Q Consensus 205 d~llfLDaD~~v~p~wLe~Ll~~l~ 229 (867)
+||-|+|+|-.+ |+.+.+.++.++
T Consensus 161 ~YVGFvDADNyi-PGaV~EYvk~yA 184 (381)
T PF09488_consen 161 RYVGFVDADNYI-PGAVNEYVKDYA 184 (381)
T ss_dssp SEEEE--TTBS--HHHHHHHHHHHH
T ss_pred ceEeEeeccCCC-cchHHHHHHHHH
Confidence 999999999876 556666666554
|
Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus (Rhodothermus obamensis), this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.; GO: 0050504 mannosyl-3-phosphoglycerate synthase activity, 0051479 mannosylglycerate biosynthetic process, 0005737 cytoplasm; PDB: 2WVM_A 2WVL_A 2WVK_A 2ZU7_B 2ZU9_B 2ZU8_A. |
| >PF11735 CAP59_mtransfer: Cryptococcal mannosyltransferase 1 ; InterPro: IPR021047 The capsule of pathogenic fungi is a complex polysaccharide whose formation is determined by a number of enzymes including, most importantly, alpha-1,3-mannosyltransferase 1 [, ] | Back alignment and domain information |
|---|
Probab=91.36 E-value=0.73 Score=48.81 Aligned_cols=174 Identities=15% Similarity=0.117 Sum_probs=87.8
Q ss_pred EEEEeCCCCCCcCchHHHHHHHhhcC--CCCEEEEEcCC-------------Cc-CchhHHhHhhhhc---------CCC
Q psy1765 151 IILVNDFSEYPSNLHGEVESFVKGLN--NGRVHLYRTSK-------------RE-GLIRARMFGAKYA---------TGK 205 (867)
Q Consensus 151 IIVVDn~Std~~~~~~~l~~~~~~~~--~~~vrii~~~~-------------n~-G~a~ArN~G~~~A---------~Gd 205 (867)
|-|+++||+| .|.+.|..+...+. +-.-+|...+. +. =++..||.+++-- .-+
T Consensus 37 vSIyE~~S~D--~T~~~L~~L~~~L~~lgv~~~i~~~~~~~~~~~~~~~~~~RI~~LA~lRN~ALePL~~~~~~~~~~fd 114 (241)
T PF11735_consen 37 VSIYESGSWD--GTKEALRALDAELDALGVPHSIVLSDITHRDEIERPPRLRRIEYLAELRNRALEPLYDLARKRGRRFD 114 (241)
T ss_pred EEEEeCCCCc--cHHHHHHHHHHHHHhCCCCeEEEeCCCcccccccccchhhhHHHHHHHHhHHHHHHHhhhhccCCCcC
Confidence 6689999999 77888887664331 11222322111 11 1368899997632 236
Q ss_pred EEEEEcCCcccCccchHHHHHHHHhcCCceeeeEEeeecCCCceeccc--cccccccccccccccccCCcCcCCCCCCCC
Q psy1765 206 VLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSS--ALVRGGFNWGLHFKWENLPKGTLNSSEDFI 283 (867)
Q Consensus 206 ~llfLDaD~~v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~~~~~~~~--~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~ 283 (867)
-|+||| |+.+.+.=+-.|+..-......++|+ ++.+.+..| |... ....|.....- .|..+....-.......
T Consensus 115 ~VlfLN-DV~f~~~Dil~LL~~~~~~~~~~aCa-mDf~~~~~f-YD~wv~RD~~G~~~~~~--~~p~f~~~~~~~~~~~~ 189 (241)
T PF11735_consen 115 KVLFLN-DVFFCPEDILELLFTRNRGNYDMACA-MDFINPPKF-YDTWVLRDIEGDSFGSP--FWPYFRSASSRDRLRRG 189 (241)
T ss_pred EEEEec-CcccCHHHHHHHHhhcCcccccchhh-cccccCccc-cceeEEecCCCCccccc--cCcCcCCHHHHHHHhcC
Confidence 799999 88776655555555444233345554 333222221 1110 00111110000 11111111111122335
Q ss_pred CcccccccccceEeEeHHHHHHhC--CCCC--CCCCCcccchHHHHHHHHcC
Q psy1765 284 KPILSPTMAGGLFAIDRQYFDSLG--QYDA--GLEIWGGENLELSFRIWMCG 331 (867)
Q Consensus 284 ~p~~~~~~~G~~~airR~~f~~vG--gfDe--~~~~~G~ED~Dls~Rl~~~G 331 (867)
.|+++-...+|..+++.+.|..-+ -|.- .....++|-.-++.-+|..|
T Consensus 190 ~pv~V~SCWnG~va~~a~pf~~~~~lrFR~~~~~~~~~sEc~Li~~D~~~~g 241 (241)
T PF11735_consen 190 DPVPVFSCWNGMVAFDAEPFLPPTPLRFRADSEGECEASECCLIHADLWRWG 241 (241)
T ss_pred CCeeeecccCCcccccchhhccCCceeecCCCCCceeccchhHhHhhhhhcC
Confidence 677788888999999999998865 2322 22223455555555555544
|
It is responsible for addition of mannose residues in an alpha-1,3 linkage to a polymannosly precursor. |
| >PF11316 Rhamno_transf: Putative rhamnosyl transferase ; InterPro: IPR021466 This bacterial family of proteins has no known function | Back alignment and domain information |
|---|
Probab=91.36 E-value=0.87 Score=48.13 Aligned_cols=62 Identities=8% Similarity=0.041 Sum_probs=40.1
Q ss_pred hHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhh---hhcCCCEE--EEEcCCcccCccchHHHHHHHH
Q psy1765 165 HGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGA---KYATGKVL--VFLDSHIEVNTHWLEPLLVPIA 229 (867)
Q Consensus 165 ~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~---~~A~Gd~l--lfLDaD~~v~p~wLe~Ll~~l~ 229 (867)
.+.|.++.+.. +.++++..+... ...+....+ ....++++ +-||+|+-++.++++.+-+.+.
T Consensus 74 ~~rL~~l~~~~--p~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~RLDdDDAl~~dFV~rlr~~a~ 140 (234)
T PF11316_consen 74 RERLRDLLADY--PQFRIVFRPPGP-HRDAMRRAINAARRDGADPVLQFRLDDDDALHRDFVARLRRAAA 140 (234)
T ss_pred HHHHHHHhccC--CCcEEEecCCch-HHHHHHHHHhhhccCCCCEEEEEEECCcchhhHHHHHHHHHHHH
Confidence 44566666666 667777666332 333333333 22345554 4579999999999999999875
|
|
| >TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase | Back alignment and domain information |
|---|
Probab=91.20 E-value=1.7 Score=47.63 Aligned_cols=131 Identities=19% Similarity=0.193 Sum_probs=72.3
Q ss_pred CCcEEEEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCC-CchhhHHHHHhhcCC--CceEEEEeccchhh
Q psy1765 51 LPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPS-NLHGEVETFVKGLND--GRVHLYRTSKREGL 127 (867)
Q Consensus 51 ~P~vSVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s-~~~~~~~~~~~~~~~--~~~~~~~~~~~~gi 127 (867)
+-...||||+-||....| +-||.--|..- =||||-|.+..+- ..+.+.+ -++.+-. .|-.++..++.-|+
T Consensus 49 ~~~maIVVP~KdE~l~ll----eGVL~gIPh~c--~iIvVSNS~r~~~d~f~~E~d-~~~~f~~~t~r~~i~vHQkDp~l 121 (381)
T TIGR02460 49 LGKTAIVVPVKNEKLHLL----EGVLSGIPHEC--PIIIVSNSKREPPDRFKMEVD-LIRHFSNLTHRKIIIIHQKDPAL 121 (381)
T ss_pred HhCcEEEEEcCCCchhHH----hhHhhcCCCCC--eEEEEeCCCCCChhHHHHHHH-HHHHHHHhhcCceEEEEcCCHHH
Confidence 357899999999887444 44444444444 6888888776441 1111111 1111111 23335566666666
Q ss_pred HHHhhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhc---CC
Q psy1765 128 IRARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYA---TG 204 (867)
Q Consensus 128 ~~a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A---~G 204 (867)
+.|-..+= ..+.+. .=..+ +-|.+.++-.|+..| ..
T Consensus 122 a~Af~~~g--------------------------------y~~il~-----~~g~V----R~GKgEGMiiG~lLAk~~g~ 160 (381)
T TIGR02460 122 AEAFKEVG--------------------------------YTSILG-----ENGRV----RSGKGEGMLLGLLLAKAIGA 160 (381)
T ss_pred HHHHHHcC--------------------------------chhhhC-----CCCce----ecCcchHHHHHHHHHHHhCC
Confidence 66532111 000110 11123 346667777776555 56
Q ss_pred CEEEEEcCCcccCccchHHHHHHHHh
Q psy1765 205 KVLVFLDSHIEVNTHWLEPLLVPIAE 230 (867)
Q Consensus 205 d~llfLDaD~~v~p~wLe~Ll~~l~~ 230 (867)
+||-|+|+|-.+ |+.+.+.+..++.
T Consensus 161 ~YVGFiDaDNyi-PGaV~EYvk~yAa 185 (381)
T TIGR02460 161 EYVGFVDADNYF-PGAVNEYVKIYAA 185 (381)
T ss_pred ceEeEeecccCC-CchHHHHHHHHHh
Confidence 999999999977 4666666666553
|
This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together mannosyl-3-phosphoglycerate phosphatase (MPGP) comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus, this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase. |
| >PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional | Back alignment and domain information |
|---|
Probab=90.95 E-value=1.8 Score=47.67 Aligned_cols=131 Identities=19% Similarity=0.191 Sum_probs=71.8
Q ss_pred CCcEEEEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCC-CchhhHHHHHhhcC--CCceEEEEeccchhh
Q psy1765 51 LPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPS-NLHGEVETFVKGLN--DGRVHLYRTSKREGL 127 (867)
Q Consensus 51 ~P~vSVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s-~~~~~~~~~~~~~~--~~~~~~~~~~~~~gi 127 (867)
+-...||||+-||....|. -||.--|.+- =||||-|.+..+- ..+.+.+. ++.+- -.|-.++..++.-|+
T Consensus 50 ~~~mAIVVP~KdE~l~lle----GVL~gIPh~c--~iIvVSNS~r~~~d~f~~E~dl-v~~f~~~t~r~~i~vHQkDp~l 122 (393)
T PRK14503 50 LGRMAIVVPVKNERLKLLE----GVLKGIPHEC--PIIVVSNSKREPPDRFKLEVDL-VRHFYRLTQRPIIIVHQKDPGL 122 (393)
T ss_pred HhCcEEEEEcCCCchhHHh----hHhhcCCCCC--eEEEEeCCCCCCchHHHHHHHH-HHHHHhhhcCceEEEEcCCHHH
Confidence 3568999999998874444 4444444444 6888887765441 11111111 11111 123335566666666
Q ss_pred HHHhhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhc---CC
Q psy1765 128 IRARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYA---TG 204 (867)
Q Consensus 128 ~~a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A---~G 204 (867)
+.|-..+= ..+.+. .=..| +-|.+.++-.|+..| ..
T Consensus 123 a~Af~~aG--------------------------------yp~il~-----~~g~V----R~GKgEGMiiG~lLAk~~g~ 161 (393)
T PRK14503 123 AEALKEAG--------------------------------YPYILD-----ENGLV----RSGKGEGMIIGLLLAKALGA 161 (393)
T ss_pred HHHHHHcC--------------------------------ChhhhC-----CCCce----ecCcchHHHHHHHHHHHhCC
Confidence 66532111 000110 11123 346667777776555 56
Q ss_pred CEEEEEcCCcccCccchHHHHHHHHh
Q psy1765 205 KVLVFLDSHIEVNTHWLEPLLVPIAE 230 (867)
Q Consensus 205 d~llfLDaD~~v~p~wLe~Ll~~l~~ 230 (867)
+||-|+|+|-.+ |+.+.+.+..++.
T Consensus 162 ~YVGFiDADNyi-PGaV~EYvk~yAA 186 (393)
T PRK14503 162 RYVGFVDADNYI-PGAVNEYVKIYAA 186 (393)
T ss_pred CeEeEeecccCC-CchHHHHHHHHHh
Confidence 999999999977 5666666665553
|
|
| >PF09258 Glyco_transf_64: Glycosyl transferase family 64 domain; InterPro: IPR015338 Members of this entry catalyse the transfer reaction of N-acetylglucosamine and N-acetylgalactosamine from the respective UDP-sugars to the non-reducing end of [glucuronic acid]beta 1-3[galactose]beta 1-O-naphthalenemethanol, an acceptor substrate analogue of the natural common linker of various glycosylaminoglycans | Back alignment and domain information |
|---|
Probab=90.62 E-value=1.1 Score=47.73 Aligned_cols=59 Identities=15% Similarity=0.116 Sum_probs=42.0
Q ss_pred CCEEEEEcCCCcCchhHHhHhhhhcCCCEEEEEcCCcccCccchHHHHHHHHhcCCceeee
Q psy1765 178 GRVHLYRTSKREGLIRARMFGAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVP 238 (867)
Q Consensus 178 ~~vrii~~~~n~G~a~ArN~G~~~A~Gd~llfLDaD~~v~p~wLe~Ll~~l~~~~~~vv~p 238 (867)
..|++++.+.| -...|-.-...-+.+.|+.+|.|+.++.+.|+...+..++.+..+|+.
T Consensus 52 vpV~~~~~~~n--sLnnRF~p~~~i~T~AVl~~DDDv~~~~~~l~faF~~W~~~pdrlVGf 110 (247)
T PF09258_consen 52 VPVRVVRSSRN--SLNNRFLPDPEIETDAVLSLDDDVMLSCDELEFAFQVWREFPDRLVGF 110 (247)
T ss_dssp S-EEEEEESSH--HGGGGGS--TT--SSEEEEEETTEEE-HHHHHHHHHHHCCSTTSEEES
T ss_pred ceEEEEecCCc--cHHhcCcCccccCcceEEEecCCcccCHHHHHHHHHHHHhChhheeCC
Confidence 57888887643 123344445566799999999999999999999999999999888863
|
They are also required for the biosynthesis of heparan-sulphate []. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0031227 intrinsic to endoplasmic reticulum membrane; PDB: 1ON6_B 1OMZ_B 1OMX_B 1ON8_B. |
| >PLN02190 cellulose synthase-like protein | Back alignment and domain information |
|---|
Probab=90.62 E-value=1.4 Score=53.34 Aligned_cols=165 Identities=13% Similarity=0.169 Sum_probs=98.2
Q ss_pred CCCcEEEEEEeCC---CChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhh--HHHHHh---------hcC-CC
Q psy1765 50 TLPSTSVIICFYN---EHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGE--VETFVK---------GLN-DG 114 (867)
Q Consensus 50 ~~P~vSVIIp~yN---e~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~--~~~~~~---------~~~-~~ 114 (867)
.+|.|-|.|+++| |+...+..|+-|+++-+||.-..-+-|-|||.+.-+ +.+. ..+|++ ++. -+
T Consensus 91 ~Lp~VDvFV~TaDP~kEPpl~v~nTvLSilA~dYP~eklscYvSDDG~s~LT-~~al~EAa~FA~~WvPFCrK~~IepRa 169 (756)
T PLN02190 91 DLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLT-YFSLKEASKFAKIWVPFCKKYNVRVRA 169 (756)
T ss_pred cCCcceEEEecCCCCcCCHHHHHHHHHHHHhccCCccccceEEecCCCcHhH-HHHHHHHHHHHhhhcccccccCCCcCC
Confidence 5899999999999 999899999999999999975446789999987642 2211 122222 000 01
Q ss_pred ceEEEE-----------eccchhh------HHHhhhhhhhhcccccc------------------ccceeEEEEEeCCCC
Q psy1765 115 RVHLYR-----------TSKREGL------IRARMFGAKYATGKNRI------------------QSLLHEIILVNDFSE 159 (867)
Q Consensus 115 ~~~~~~-----------~~~~~gi------~~a~~~g~~~a~g~~~~------------------~~~l~EIIVVDn~St 159 (867)
+-.|+- ..+++-+ ...|... |++.... ++|+ +|| .|+ +.
T Consensus 170 Pe~YF~~~~~~~~~~~f~~e~~~~K~eYee~k~ri~~---a~~~~~~~~~~~~~~~~~~~~~~dH~~ii-qVl-l~~-~~ 243 (756)
T PLN02190 170 PFRYFLNPPVATEDSEFSKDWEMTKREYEKLSRKVED---ATGDSHWLDAEDDFEAFSNTKPNDHSTIV-KVV-WEN-KG 243 (756)
T ss_pred HHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHHh---hccCCCCcccCCcccccCCCCCCCCccce-EEE-ecC-CC
Confidence 111111 0111111 1112211 2111111 1111 222 233 21
Q ss_pred CCcCchHHHHHHHhhcCCCCEEEEEcCCCcC-----chhHHhHhhhhc----CCCEEEEEcCCccc-CccchHHHHHHHH
Q psy1765 160 YPSNLHGEVESFVKGLNNGRVHLYRTSKREG-----LIRARMFGAKYA----TGKVLVFLDSHIEV-NTHWLEPLLVPIA 229 (867)
Q Consensus 160 d~~~~~~~l~~~~~~~~~~~vrii~~~~n~G-----~a~ArN~G~~~A----~Gd~llfLDaD~~v-~p~wLe~Ll~~l~ 229 (867)
+ .. + -..+ |.+.++..+|+.| .++|+|.-++.+ .++||+-||+|..+ ++..+...+=.+.
T Consensus 244 ~-~~-----~--~~~l--P~LVYvSREKrP~~~Hh~KAGAmNaLlRVSavmtNaP~iLnlDCDmY~Nns~~~r~AmCf~l 313 (756)
T PLN02190 244 G-VG-----D--EKEV--PHLVYISREKRPNYLHHYKAGAMNFLVRVSGLMTNAPYMLNVDCDMYANEADVVRQAMCIFL 313 (756)
T ss_pred C-cc-----c--cccC--ceEEEEeccCCCCCCcccccchhHHHHHHhhhhccCCeEEEecCccccCchhHHHHhhhhhc
Confidence 1 00 0 0123 7889998888877 688999988764 79999999999988 6888888887776
Q ss_pred hc
Q psy1765 230 ER 231 (867)
Q Consensus 230 ~~ 231 (867)
..
T Consensus 314 d~ 315 (756)
T PLN02190 314 QK 315 (756)
T ss_pred CC
Confidence 43
|
|
| >KOG4315|consensus | Back alignment and domain information |
|---|
Probab=90.11 E-value=0.17 Score=55.91 Aligned_cols=27 Identities=48% Similarity=0.939 Sum_probs=23.2
Q ss_pred CCCCcchHHHHHHhcCCCCCccCCCCC
Q psy1765 817 SIPNENKGFRMLSKMGWKAGQTLGKDE 843 (867)
Q Consensus 817 ~~~~~~~g~~~~~~~g~~~g~~lg~~~ 843 (867)
.|.-+.-|.+||+-||||||.|+||..
T Consensus 150 aiPVe~FGlAmLrG~GWkpg~gigk~~ 176 (455)
T KOG4315|consen 150 AIPVEGFGLAMLRGMGWKPGPGIGKNK 176 (455)
T ss_pred cCchhHHHHHHHhcCCCCCCCCcCcCC
Confidence 355567899999999999999999963
|
|
| >cd06915 NTP_transferase_WcbM_like WcbM_like is a subfamily of nucleotidyl transferases | Back alignment and domain information |
|---|
Probab=89.67 E-value=13 Score=38.12 Aligned_cols=54 Identities=13% Similarity=0.028 Sum_probs=39.7
Q ss_pred CEEEEEcCCCcCchhHHhHhhhhcCCCEEEEEcCCcccCccchHHHHHHHHhcCC
Q psy1765 179 RVHLYRTSKREGLIRARMFGAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAERTN 233 (867)
Q Consensus 179 ~vrii~~~~n~G~a~ArN~G~~~A~Gd~llfLDaD~~v~p~wLe~Ll~~l~~~~~ 233 (867)
.+.+.......|.+.+.-.|++....+.++++++|..+++ .+..+++.+.+...
T Consensus 71 ~~~~~~~~~~~G~~~~l~~a~~~~~~~~~lv~~~D~~~~~-~~~~~l~~~~~~~~ 124 (223)
T cd06915 71 RIYYVIEPEPLGTGGAIKNALPKLPEDQFLVLNGDTYFDV-DLLALLAALRASGA 124 (223)
T ss_pred eEEEEECCCCCcchHHHHHHHhhcCCCCEEEEECCcccCC-CHHHHHHHHHhCCC
Confidence 3445555567888888888888877788999999997754 47778887765443
|
WcbM protein of Burkholderia mallei is involved in the biosynthesis, export or translocation of capsule. It is a subfamily of nucleotidyl transferases that transfer nucleotides onto phosphosugars. |
| >PF03214 RGP: Reversibly glycosylated polypeptide; InterPro: IPR004901 Alpha-1,4-glucan-protein synthase catalyses the reaction: |
Back alignment and domain information |
|---|
Probab=89.63 E-value=1.1 Score=48.86 Aligned_cols=48 Identities=15% Similarity=0.160 Sum_probs=39.0
Q ss_pred chhHHhHhhhhcCCCEEEEEcCCcccCccchHHHHHHHHhcCCceeee
Q psy1765 191 LIRARMFGAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVP 238 (867)
Q Consensus 191 ~a~ArN~G~~~A~Gd~llfLDaD~~v~p~wLe~Ll~~l~~~~~~vv~p 238 (867)
-.+.||.|.-.|+-+|++++|.||.+..++.-..++.+.++...+.+|
T Consensus 79 ~~a~R~fGyL~s~~~yivsiDDD~~P~~D~~g~~~~~v~qh~~~~~~~ 126 (348)
T PF03214_consen 79 GDACRNFGYLVSKKDYIVSIDDDCLPAKDDFGTHIDAVAQHVENLSTP 126 (348)
T ss_pred ccchhhhHhhhcccceEEEEccccccccCCccceehhhhccceeeecc
Confidence 347899999999999999999999998888888878777765444443
|
It is found associated with the cell wall, with the highest concentrations in the plasmodesmata. It is also located in the Golgi apparatus.; GO: 0008466 glycogenin glucosyltransferase activity, 0016758 transferase activity, transferring hexosyl groups, 0007047 cellular cell wall organization, 0030244 cellulose biosynthetic process, 0005618 cell wall, 0030054 cell junction |
| >PF13733 Glyco_transf_7N: N-terminal region of glycosyl transferase group 7; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A | Back alignment and domain information |
|---|
Probab=89.21 E-value=1.3 Score=42.22 Aligned_cols=31 Identities=13% Similarity=-0.008 Sum_probs=19.6
Q ss_pred cCchhHHhHhhhhc----CCCEEEEEcCCcccCcc
Q psy1765 189 EGLIRARMFGAKYA----TGKVLVFLDSHIEVNTH 219 (867)
Q Consensus 189 ~G~a~ArN~G~~~A----~Gd~llfLDaD~~v~p~ 219 (867)
+..+.-.|.|+..| .-|.++|=|-|..+..+
T Consensus 93 FNRg~L~NvGf~eA~~~~~~dc~ifHDVDllP~~~ 127 (136)
T PF13733_consen 93 FNRGKLMNVGFLEALKDDDFDCFIFHDVDLLPEND 127 (136)
T ss_dssp --HHHHHHHHHHHHHHHS--SEEEEE-TTEEESBT
T ss_pred CchhhhhhHHHHHHhhccCCCEEEEecccccccCC
Confidence 34456677777666 35899999999987654
|
... |
| >TIGR00466 kdsB 3-deoxy-D-manno-octulosonate cytidylyltransferase | Back alignment and domain information |
|---|
Probab=88.26 E-value=14 Score=39.01 Aligned_cols=126 Identities=11% Similarity=0.169 Sum_probs=69.8
Q ss_pred CCCEEEEEcCCcc-cCccchHHHHHHHHhcCCceeeeEEeeec------CCCceeccccccccccccccccccccC--Cc
Q psy1765 203 TGKVLVFLDSHIE-VNTHWLEPLLVPIAERTNTVTVPIIDIIN------ADTFQYTSSALVRGGFNWGLHFKWENL--PK 273 (867)
Q Consensus 203 ~Gd~llfLDaD~~-v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~------~~~~~~~~~~~~~g~f~~~l~~~~~~~--~~ 273 (867)
..++++++|+|.- +++..|+.+++.+.+...+++.+.+...+ +++..+.. ..++. .+.|....+ .+
T Consensus 87 ~~d~Vli~~gD~Pli~~~~I~~li~~~~~~~~~~a~~~~~~~d~~~~~~p~~vk~v~---~~~g~--alyfsr~~ip~~R 161 (238)
T TIGR00466 87 DDERIVNLQGDEPFIPKEIIRQVADNLATKNVPMAALAVKIHDAEEAFNPNAVKVVL---DSQGY--ALYFSRSLIPFDR 161 (238)
T ss_pred CCCEEEEEcCCcCcCCHHHHHHHHHHHhcCCCCEEEEeeecCCHHHccCCCceEEEe---CCCCe--EEEecCCCCCCCC
Confidence 5689999999986 59999999999986544455554443322 11211110 00110 111211111 11
Q ss_pred CcCCCCCCCCCcccc-cccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEc
Q psy1765 274 GTLNSSEDFIKPILS-PTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIP 338 (867)
Q Consensus 274 ~~~~~~~~~~~p~~~-~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P 338 (867)
...... ..|... ....-|..+++++++++.-.+.+...-- .|.+|. +|+...|++|.++.
T Consensus 162 ~~~~~~---~tpq~~~~~~h~Giy~~~~~~L~~~~~~~~~~le~-~e~leq-lr~le~g~~i~~~~ 222 (238)
T TIGR00466 162 DFFAKR---QTPVGDNLLRHIGIYGYRAGFIEEYVAWKPCVLEE-IEKLEQ-LRVLYYGEKIHVKI 222 (238)
T ss_pred Cccccc---ccccccceeEEEEEEeCCHHHHHHHHhCCCCcccc-cchhHH-HhhhhcCCceEEEE
Confidence 111000 111110 1223578999999999977776654221 466664 79999999997654
|
|
| >PLN02436 cellulose synthase A | Back alignment and domain information |
|---|
Probab=88.24 E-value=1.9 Score=54.03 Aligned_cols=169 Identities=15% Similarity=0.170 Sum_probs=99.1
Q ss_pred CCCCcEEEEEEeCC---CChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchh--hHHHHHh--------------
Q psy1765 49 STLPSTSVIICFYN---EHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHG--EVETFVK-------------- 109 (867)
Q Consensus 49 ~~~P~vSVIIp~yN---e~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~--~~~~~~~-------------- 109 (867)
+.+|.|-|.|++-+ |+.-.+..||-||++-+||.-..-+.|-|||.+.-+ +.+ |..+|++
T Consensus 362 s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LT-f~AL~EAa~FAk~WvPFCkK~~IepR 440 (1094)
T PLN02436 362 SELASVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLT-FEALSETSEFARKWVPFCKKFSIEPR 440 (1094)
T ss_pred ccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHH-HHHHHHHHHHHHhhcccccccCCCcC
Confidence 56999999999964 666689999999999999976557889999976541 111 1122222
Q ss_pred ---hcCCCceEE-------EEeccchhh------HHHhhhhhhh------------hcccccc-------ccceeEEEEE
Q psy1765 110 ---GLNDGRVHL-------YRTSKREGL------IRARMFGAKY------------ATGKNRI-------QSLLHEIILV 154 (867)
Q Consensus 110 ---~~~~~~~~~-------~~~~~~~gi------~~a~~~g~~~------------a~g~~~~-------~~~l~EIIVV 154 (867)
..+.+.+.. ....+++-+ ...|+.++.. +.|..=. ++|+ +|+ .
T Consensus 441 aPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~vp~~~~~m~dgt~W~g~~~~dHp~II-qVl-l 518 (1094)
T PLN02436 441 APEWYFSQKMDYLKNKVHPAFVRERRAMKREYEEFKVKINALVATAQKVPEDGWTMQDGTPWPGNNVRDHPGMI-QVF-L 518 (1094)
T ss_pred CHHHHhhccCCcccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhhhhccCccCCCCCCCCCccce-EEE-e
Confidence 111111111 111122222 1233333321 2221000 1111 222 2
Q ss_pred eCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcC-----chhHHhHhhhhc----CCCEEEEEcCCccc-CccchHHH
Q psy1765 155 NDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREG-----LIRARMFGAKYA----TGKVLVFLDSHIEV-NTHWLEPL 224 (867)
Q Consensus 155 Dn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G-----~a~ArN~G~~~A----~Gd~llfLDaD~~v-~p~wLe~L 224 (867)
|+ +.+.. .+. ..+ |.+.++..+|+.| .|+|+|+.++.+ .++||+-||.|-.+ ++..+...
T Consensus 519 ~~-~~~~d-----~~g--~~L--P~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaP~ILNLDCDmYiNns~a~r~A 588 (1094)
T PLN02436 519 GH-SGVRD-----VEG--NEL--PRLVYVSREKRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLNVDCDHYINNSKALREA 588 (1094)
T ss_pred cC-CCCcc-----ccc--ccC--ceEEEEecccCCCCCcchhhhhhhhhhhhheeecCCceEEecccccccCchHHHHHh
Confidence 32 22110 000 113 7899999888877 578999998865 79999999999987 78888888
Q ss_pred HHHHHh
Q psy1765 225 LVPIAE 230 (867)
Q Consensus 225 l~~l~~ 230 (867)
+=.+..
T Consensus 589 MCfllD 594 (1094)
T PLN02436 589 MCFMMD 594 (1094)
T ss_pred hhhhcC
Confidence 877764
|
|
| >PRK10018 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=88.14 E-value=1.2 Score=48.38 Aligned_cols=32 Identities=19% Similarity=0.186 Sum_probs=28.6
Q ss_pred CCceEEEEeccchhhHHHhhhhhhhhcccccc
Q psy1765 113 DGRVHLYRTSKREGLIRARMFGAKYATGKNRI 144 (867)
Q Consensus 113 ~~~~~~~~~~~~~gi~~a~~~g~~~a~g~~~~ 144 (867)
+.+|++++.++|.|++.|+|.|+.+|+|++++
T Consensus 59 ~~ri~~i~~~~n~G~~~a~N~gi~~a~g~~I~ 90 (279)
T PRK10018 59 DPRITYIHNDINSGACAVRNQAIMLAQGEYIT 90 (279)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHcCCCEEE
Confidence 45788889999999999999999999999764
|
|
| >PLN03180 reversibly glycosylated polypeptide; Provisional | Back alignment and domain information |
|---|
Probab=87.56 E-value=1.5 Score=47.89 Aligned_cols=31 Identities=19% Similarity=0.098 Sum_probs=27.0
Q ss_pred chhHHhHhhhhcCCCEEEEEcCCcccCccch
Q psy1765 191 LIRARMFGAKYATGKVLVFLDSHIEVNTHWL 221 (867)
Q Consensus 191 ~a~ArN~G~~~A~Gd~llfLDaD~~v~p~wL 221 (867)
-.+.||.|.-.++.+|++++|.||.+..+|=
T Consensus 81 ~~a~R~fGyL~s~~~yivsiDDD~~Pa~d~~ 111 (346)
T PLN03180 81 DSACRCFGYLVSKKKYIFTIDDDCFVAKDPS 111 (346)
T ss_pred cccchhhhheeecceEEEEECCCCCCCCCCc
Confidence 3478999999999999999999999977753
|
|
| >PF12804 NTP_transf_3: MobA-like NTP transferase domain; PDB: 3FWW_A 2XME_D 2XMH_C 2DPW_A 2WAW_A 2OI5_B 1HV9_B 1FWY_A 2OI6_A 2OI7_B | Back alignment and domain information |
|---|
Probab=86.78 E-value=4.1 Score=39.79 Aligned_cols=81 Identities=12% Similarity=0.263 Sum_probs=60.1
Q ss_pred eEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcC-CCcCchhHHhHhhhhc-CCCEEEEEcCCcc-cCccchHHHH
Q psy1765 149 HEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTS-KREGLIRARMFGAKYA-TGKVLVFLDSHIE-VNTHWLEPLL 225 (867)
Q Consensus 149 ~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~-~n~G~a~ArN~G~~~A-~Gd~llfLDaD~~-v~p~wLe~Ll 225 (867)
.+|+||-+. +.+..++.. ..++++.++ ...|...+.-.|+..+ ..+.++++.+|.. ++++-++.++
T Consensus 40 ~~Ivvv~~~--------~~~~~~~~~---~~~~~v~~~~~~~G~~~sl~~a~~~~~~~~~vlv~~~D~p~~~~~~l~~l~ 108 (160)
T PF12804_consen 40 DDIVVVTGE--------EEIYEYLER---YGIKVVVDPEPGQGPLASLLAALSQLPSSEPVLVLPCDQPFLSPELLRRLL 108 (160)
T ss_dssp SEEEEEEST--------HHHHHHHTT---TTSEEEE-STSSCSHHHHHHHHHHTSTTSSEEEEEETTETTS-HHHHHHHH
T ss_pred ceEEEecCh--------HHHHHHHhc---cCceEEEeccccCChHHHHHHHHHhcccCCCcEEEeCCccccCHHHHHHHH
Confidence 577777654 123333333 367777775 4689999999999998 8999999999995 5999999999
Q ss_pred HHHHhcCCceeeeEE
Q psy1765 226 VPIAERTNTVTVPII 240 (867)
Q Consensus 226 ~~l~~~~~~vv~p~i 240 (867)
+.+.+++..++++..
T Consensus 109 ~~~~~~~~~i~~~~~ 123 (160)
T PF12804_consen 109 EALEKSPADIVVPVF 123 (160)
T ss_dssp HHHHHTTTSEEEEEE
T ss_pred HHHhccCCcEEEEEE
Confidence 999877766666543
|
... |
| >PF03498 CDtoxinA: Cytolethal distending toxin A/C family; InterPro: IPR003558 Escherichia coli, Haemophilus spp and Campylobacter spp | Back alignment and domain information |
|---|
Probab=86.55 E-value=1.4 Score=43.10 Aligned_cols=77 Identities=22% Similarity=0.242 Sum_probs=43.5
Q ss_pred eceeeecCCCccEEEe-CCCCCCCcceeeeeeeccceeeecccCcccccCCChhhhhhhhhccccCCCCCcccccccccc
Q psy1765 597 ELLCLDAGATKPKLTK-CHEMGGSQEYWCWLRCKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNYT 675 (867)
Q Consensus 597 ~~~CLd~~g~~v~l~~-C~~~~~~Q~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~~~~~ 675 (867)
.+.||.+.+..+.... |......|.| ++.+-. +
T Consensus 61 ~~~CL~~~~~G~~~~~~C~~~~~~q~F-~iiPtt---------------------------------------------t 94 (150)
T PF03498_consen 61 TGTCLAAYGNGVFHYKSCDQDNLEQVF-SIIPTT---------------------------------------------T 94 (150)
T ss_dssp TSEEEEEETTCEEEE--TTTCHGHH-E-EEEEBT---------------------------------------------T
T ss_pred CCcceeecCCCeEeecccCCCChhceE-EEEEcC---------------------------------------------C
Confidence 3569999776666666 9987555664 332111 2
Q ss_pred cceEEEecCCCceEeecCCC--CCCCceEEecCCCC---CCCccEEEcc
Q psy1765 676 SHFHIRLSGTDLCLTSKVDK--TKGSPLVLKKCDEL---SKTQRWSKTD 719 (867)
Q Consensus 676 ~~~~i~~~~sg~CLd~~~~~--~~g~~v~l~~C~~~---~~~Q~W~~~~ 719 (867)
...+|++..++.||.+.... .....+.+.+|+.. ...|+|.++.
T Consensus 95 gAVQIks~~~~~Cl~~~~~~~~~~~~~i~l~~Cd~~~~~~l~~lw~itP 143 (150)
T PF03498_consen 95 GAVQIKSLSTGECLQTFNNSRTPIYYSIGLTPCDKSKEINLDQLWFITP 143 (150)
T ss_dssp S-EEEEETTT--EEEE-STTSS-SSEEEEEE---S-EEETGGGEEEEE-
T ss_pred CcEEEEecCCCceEEecCCCceeEEeeEEeeeCCCcCCCCHHHcEEEcC
Confidence 23689999999999983222 12347889999431 3468998875
|
all produce a toxin that is seen to cause distension in certain cell lines [, ], which eventually disintegrate and die. This novel toxin, termed cytolethal distending toxin (cdt), has three subunits: A, B and C. Their sizes are approx. 27.7, 29.5 and 19.9kDa respectively [], and they appear to be entirely novel []. Further research on the complete toxin has revealed that it blocks the cell cycle at stage G2, through inactivation of the cyclin-dependent kinase Cdk1, and without induction of DNA breaks. This leads to multipolar abortive mitosis and micronucleation, associated with centrosomal amplification []. The roles of each subunit are unclear, but it is believed that they have separate roles in pathogenicity. This entry represents the A and C subunits.; GO: 0009405 pathogenesis; PDB: 2F2F_A 1SR4_C. |
| >COG1209 RfbA dTDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=86.49 E-value=30 Score=37.12 Aligned_cols=141 Identities=18% Similarity=0.168 Sum_probs=89.6
Q ss_pred CCEEEEEcCCCcCchhHHhHhhhhcC-CCEEEEEcCCcccCccchHHHHHHHHhcCCceeeeEEeeecCCCceecccccc
Q psy1765 178 GRVHLYRTSKREGLIRARMFGAKYAT-GKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALV 256 (867)
Q Consensus 178 ~~vrii~~~~n~G~a~ArN~G~~~A~-Gd~llfLDaD~~v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~~~~~~~~~~~ 256 (867)
.++.++.+++..|++.|.-.|-.... .++++.|.+..... =|+.++..+.+...++......+-|+..|....
T Consensus 73 v~itY~~Q~~p~GlA~Av~~a~~fv~~~~f~l~LGDNi~~~--~l~~~~~~~~~~~~ga~i~~~~V~dP~rfGV~e---- 146 (286)
T COG1209 73 VDITYAVQPEPDGLAHAVLIAEDFVGDDDFVLYLGDNIFQD--GLSELLEHFAEEGSGATILLYEVDDPSRYGVVE---- 146 (286)
T ss_pred cceEEEecCCCCcHHHHHHHHHhhcCCCceEEEecCceecc--ChHHHHHHHhccCCCcEEEEEEcCCcccceEEE----
Confidence 58999999999999999999999987 67777776555544 788888888765444333333333333222110
Q ss_pred ccccccccccccccCCcCcCCCCCCCCCcccccccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEE
Q psy1765 257 RGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAM 336 (867)
Q Consensus 257 ~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~ 336 (867)
|+- ..+-..+ ...+..| ++.....|+.+++.++|+.+-..-+.-..= .|=+|.--.+...|..+..
T Consensus 147 ---~d~--~~~v~~l-------~EKP~~P-~SNlAvtGlY~~d~~Vf~~~~~ikPS~RGE-lEITd~i~~~i~~G~~~~~ 212 (286)
T COG1209 147 ---FDE--DGKVIGL-------EEKPKEP-KSNLAVTGLYFYDPSVFEAIKQIKPSARGE-LEITDAIDLYIEKGYLVVA 212 (286)
T ss_pred ---EcC--CCcEEEe-------EECCCCC-CCceeEEEEEEeChHHHHHHHcCCCCCCCc-eEehHHHHHHHHcCcEEEE
Confidence 100 0000000 1112223 233444578899999999998776655432 5778888889999998876
Q ss_pred Ec
Q psy1765 337 IP 338 (867)
Q Consensus 337 ~P 338 (867)
..
T Consensus 213 ~~ 214 (286)
T COG1209 213 IL 214 (286)
T ss_pred EE
Confidence 65
|
|
| >PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=86.45 E-value=5.4 Score=40.71 Aligned_cols=121 Identities=14% Similarity=0.178 Sum_probs=68.1
Q ss_pred hHHhHhhhhcC-CCEEEEEcCCcccCccchHHHHHHHHhc--CCceeeeEEeeecCCCceeccccccccccccccccccc
Q psy1765 193 RARMFGAKYAT-GKVLVFLDSHIEVNTHWLEPLLVPIAER--TNTVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWE 269 (867)
Q Consensus 193 ~ArN~G~~~A~-Gd~llfLDaD~~v~p~wLe~Ll~~l~~~--~~~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~ 269 (867)
.+.+.+.+... .+|++.+|+|+.+.+.-|...|...... ...+.+..... ....+. ...+|.
T Consensus 69 ~~~~w~~~~c~~~~~v~k~DDD~~vn~~~l~~~L~~~~~~~~~~~~~g~~~~~----------~~~~r~-----~~~kw~ 133 (195)
T PF01762_consen 69 AGLKWASKHCPNAKYVLKVDDDVFVNPDRLVSFLKSLKQDPSKNSIYGGCIKN----------GPPIRD-----PSSKWY 133 (195)
T ss_pred HHHHHHHhhCCchhheeecCcEEEEehHHhhhhhhhcccCccccccccccccC----------Cccccc-----cccCce
Confidence 44555555554 8999999999999888777777766111 11222211100 000000 001111
Q ss_pred cCCcCcCCCCCCCCCcccccccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEE
Q psy1765 270 NLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLA 335 (867)
Q Consensus 270 ~~~~~~~~~~~~~~~p~~~~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~ 335 (867)
.+..... ...-.+.+.|+++++++++.+.+-..-.....+..||+=+++=+...|.+..
T Consensus 134 -v~~~~y~------~~~yP~y~~G~~yvls~~~v~~i~~~~~~~~~~~~eDv~iGi~~~~~~i~~~ 192 (195)
T PF01762_consen 134 -VSEEEYP------DDYYPPYCSGGGYVLSSDVVKRIYKASSHTPFFPLEDVFIGILAEKLGIKPI 192 (195)
T ss_pred -eeeeecc------cccCCCcCCCCeEEecHHHHHHHHHHhhcCCCCCchHHHHHHHHHHCCCCcc
Confidence 1111111 1112357789999999999988865433344444899999887777776543
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 31 (GH31 from CAZY) comprises enzymes with a number of known activities; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase (2.4.1.149 from EC); beta-1,3-galactosyltransferase (2.4.1 from EC); fucose-specific beta-1,3-N-acetylglucosaminyltransferase (2.4.1 from EC); globotriosylceramide beta-1,3-GalNAc transferase (2.4.1.79 from EC) [, ].; GO: 0008378 galactosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane |
| >PLN02917 CMP-KDO synthetase | Back alignment and domain information |
|---|
Probab=84.06 E-value=24 Score=38.72 Aligned_cols=160 Identities=12% Similarity=0.144 Sum_probs=82.5
Q ss_pred HHHHHHhhcCCCCEEEEEc--CCCcCchhHHhHhhhhcC--CCEEEEEcCCcc-cCccchHHHHHHHHhcCCceeeeEEe
Q psy1765 167 EVESFVKGLNNGRVHLYRT--SKREGLIRARMFGAKYAT--GKVLVFLDSHIE-VNTHWLEPLLVPIAERTNTVTVPIID 241 (867)
Q Consensus 167 ~l~~~~~~~~~~~vrii~~--~~n~G~a~ArN~G~~~A~--Gd~llfLDaD~~-v~p~wLe~Ll~~l~~~~~~vv~p~i~ 241 (867)
.+.+++... .+.++.+ ....|.+++. .|++... .|+++++++|.- +.+..|+.+++.+.++...++...+.
T Consensus 99 ~I~~~~~~~---~v~vi~~~~~~~~GT~~~~-~a~~~l~~~~d~Vlil~gD~PlI~~~tI~~li~~~~~~~~~iv~t~~~ 174 (293)
T PLN02917 99 RIAECCRGF---GADVIMTSESCRNGTERCN-EALKKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVT 174 (293)
T ss_pred HHHHHHHHc---CCEEEeCCcccCCchHHHH-HHHHhccCCCCEEEEecCCcCCCCHHHHHHHHHHHHhcCCceEEEEee
Confidence 344444433 4555543 3345666653 5665553 689999999997 49999999999887655433332222
Q ss_pred eecC-CCceeccccccccccccccccccccCCcCcCCCCCCCCCcccccccccceEeEeHHHHHHhCCCCCCCC--CCcc
Q psy1765 242 IINA-DTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLE--IWGG 318 (867)
Q Consensus 242 ~i~~-~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~airR~~f~~vGgfDe~~~--~~G~ 318 (867)
.++. +...|...-..+..-+-.+.|....++.. ....... ........|+++++++.+..+...+++-. .|+-
T Consensus 175 ~~~~~~~~~ygrv~vv~~~~g~alyfsr~~Ipe~-kd~~~~~---~~i~~~n~Giy~f~~~~L~~l~~l~~~n~e~e~yL 250 (293)
T PLN02917 175 SLKPEDASDPNRVKCVVDNQGYAIYFSRGLIPYN-KSGKVNP---QFPYLLHLGIQSYDAKFLKIYPELPPTPLQLEEDL 250 (293)
T ss_pred ecCHHHhcCCCceEEEECCCCeEEEeecCcCCcC-CCccccc---ccceEEEEEEEEeCHHHHHHHHcCCCCcccchhcc
Confidence 2221 11222211000110000112221112211 0000000 11234567899999999988777666421 1223
Q ss_pred cchHHHHHHHHcCCeEEEEc
Q psy1765 319 ENLELSFRIWMCGGSLAMIP 338 (867)
Q Consensus 319 ED~Dls~Rl~~~G~~i~~~P 338 (867)
||+ |+.+.|++|..++
T Consensus 251 tdl----~~le~G~~i~~~~ 266 (293)
T PLN02917 251 EQL----KVLENGYKMKVIK 266 (293)
T ss_pred HHH----HHHhCCCceEEEE
Confidence 443 5889999986655
|
|
| >COG1208 GCD1 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=83.30 E-value=53 Score=37.09 Aligned_cols=149 Identities=15% Similarity=0.197 Sum_probs=86.6
Q ss_pred HHHHHHHhhc--CCCCEEEEEcCCCcCchhHHhHhhhhcCCCEEEEEcCCcccCccchHHHHHHHHhcCCceeeeEEeee
Q psy1765 166 GEVESFVKGL--NNGRVHLYRTSKREGLIRARMFGAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDII 243 (867)
Q Consensus 166 ~~l~~~~~~~--~~~~vrii~~~~n~G~a~ArN~G~~~A~Gd~llfLDaD~~v~p~wLe~Ll~~l~~~~~~vv~p~i~~i 243 (867)
+.+.+++... ...++.++...+..|-++|.-.+.....++-+++++.|...+-+ +..+++.................
T Consensus 59 ~~i~~~~~d~~~~~~~I~y~~e~~~lGTag~l~~a~~~l~~~~f~v~~GDv~~~~d-l~~l~~~~~~~~~~~~~~~~~~~ 137 (358)
T COG1208 59 EQIEEYFGDGEGLGVRITYVVEKEPLGTAGALKNALDLLGGDDFLVLNGDVLTDLD-LSELLEFHKKKGALATIALTRVL 137 (358)
T ss_pred HHHHHHHhcccccCCceEEEecCCcCccHHHHHHHHHhcCCCcEEEEECCeeeccC-HHHHHHHHHhccCccEEEEEecC
Confidence 3455555441 23689999999899999999999888888999999999999988 99999998877322221111111
Q ss_pred cCCCceeccccccccccccccccccccCCcCcCCCCCCCCCcccccccccceEeEeHHHHHHhCCCCCCCCCCcccchHH
Q psy1765 244 NADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLEL 323 (867)
Q Consensus 244 ~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dl 323 (867)
+. ..|.......+. ..-..|.-. |. . ....+..+.++.+++++++|+.+..- .....++ |+
T Consensus 138 ~~--~~~Gvv~~~~~~-~~v~~f~ek--p~-------~--~~~~~~~in~Giyi~~~~v~~~i~~~----~~~~~~~-~~ 198 (358)
T COG1208 138 DP--SEFGVVETDDGD-GRVVEFREK--PG-------P--EEPPSNLINAGIYIFDPEVFDYIEKG----ERFDFEE-EL 198 (358)
T ss_pred CC--CcCceEEecCCC-ceEEEEEec--CC-------C--CCCCCceEEeEEEEECHHHhhhcccC----Ccccchh-hH
Confidence 11 111100000000 001111111 10 0 01123567789999999999933211 1112344 77
Q ss_pred HHHHHHcCCeE
Q psy1765 324 SFRIWMCGGSL 334 (867)
Q Consensus 324 s~Rl~~~G~~i 334 (867)
.-++.+.|..+
T Consensus 199 ~~~l~~~~~~v 209 (358)
T COG1208 199 LPALAAKGEDV 209 (358)
T ss_pred HHHHHhCCCcE
Confidence 77888888633
|
|
| >PLN02400 cellulose synthase | Back alignment and domain information |
|---|
Probab=83.05 E-value=5.2 Score=50.37 Aligned_cols=176 Identities=16% Similarity=0.171 Sum_probs=98.5
Q ss_pred CCCCcEEEEEEeCC---CChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchh--hHHHHHh--------------
Q psy1765 49 STLPSTSVIICFYN---EHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHG--EVETFVK-------------- 109 (867)
Q Consensus 49 ~~~P~vSVIIp~yN---e~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~--~~~~~~~-------------- 109 (867)
+.+|.|-|.|++-+ |+.-.+..|+-||++-+||.-..-+.|-|||.+.-+ +.+ |..+|++
T Consensus 353 s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LT-f~Al~Eaa~FA~~WvPFCkK~~IepR 431 (1085)
T PLN02400 353 SQLAPVDVFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGSAMLT-FEALSETAEFARKWVPFCKKHNIEPR 431 (1085)
T ss_pred ccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHH-HHHHHHHHHHHHhhcchhhhcCCCcC
Confidence 56999999999964 666689999999999999976557889999876541 111 1122222
Q ss_pred ---hcCCCceEEE-------Eeccchhh------HHHhhhhhhhhccccccccceeEEEEEeCCCCCCc----CchHHHH
Q psy1765 110 ---GLNDGRVHLY-------RTSKREGL------IRARMFGAKYATGKNRIQSLLHEIILVNDFSEYPS----NLHGEVE 169 (867)
Q Consensus 110 ---~~~~~~~~~~-------~~~~~~gi------~~a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~----~~~~~l~ 169 (867)
..+.+.+... ...+++-+ ...|+.++.+- ...+..|.-...|++.-|. +-..++.
T Consensus 432 aPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~~~-----~~~~~~~~~~m~dgt~W~g~~~~dHp~iIq 506 (1085)
T PLN02400 432 APEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAK-----AQKIPEEGWTMQDGTPWPGNNPRDHPGMIQ 506 (1085)
T ss_pred CHHHHhccCCCcccCCCchhhHHHHHHHHHHHHHHHHHHHHHHhh-----hccCCccccccccCccCCCCCCCCCchhhh
Confidence 1111111111 01111111 12222222210 0111112212333331000 0001111
Q ss_pred HHHhh--------cCCCCEEEEEcCCCcC-----chhHHhHhhhhc----CCCEEEEEcCCccc-CccchHHHHHHHHh
Q psy1765 170 SFVKG--------LNNGRVHLYRTSKREG-----LIRARMFGAKYA----TGKVLVFLDSHIEV-NTHWLEPLLVPIAE 230 (867)
Q Consensus 170 ~~~~~--------~~~~~vrii~~~~n~G-----~a~ArN~G~~~A----~Gd~llfLDaD~~v-~p~wLe~Ll~~l~~ 230 (867)
-++.. ..-|.+.++..+++.| .|+|+|+-++.+ .++||+-||.|-.+ ++..+...+=.+..
T Consensus 507 Vll~~~~~~d~~g~~LP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~ILNlDCDmY~Nns~a~r~AMCf~lD 585 (1085)
T PLN02400 507 VFLGHSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKALKEAMCFMMD 585 (1085)
T ss_pred hhhcCCCCcccccccCceeEEEeccCCCCCCcchhhhhhHHHHHHhhhhcCCceEEecccccccCCchhHHhhhhheec
Confidence 11110 0127888998888877 578999998854 79999999999999 78888877777653
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=82.09 E-value=7.8 Score=46.93 Aligned_cols=131 Identities=15% Similarity=0.137 Sum_probs=71.3
Q ss_pred CCcEEEEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCC-CchhhHHHHHhhcC-C-CceEEEEeccchhh
Q psy1765 51 LPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPS-NLHGEVETFVKGLN-D-GRVHLYRTSKREGL 127 (867)
Q Consensus 51 ~P~vSVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s-~~~~~~~~~~~~~~-~-~~~~~~~~~~~~gi 127 (867)
+-...||||+-||....| +-||.--|.+- =||||-|.+-.+- ..+.+.+. ++.+- . .|-.++..++.-|+
T Consensus 54 ~~~~aivvp~k~e~~~~~----~gvl~~ip~~c--~ii~vsns~r~~~d~~~~e~~~-~~~~~~~~~~~~~~vhq~dp~~ 126 (694)
T PRK14502 54 EKKMAIVLPIKDEDLKVF----EGVLSGIPHDC--LMIVISNSSKQEVDNFKNEKDI-VNRFCRITHRQAIVVHQKNPEL 126 (694)
T ss_pred HhCcEEEEEcCCCchhHH----hhHhhcCCCCC--eEEEEeCCCCCchHHHHHHHHH-HHHHHHhhcCceEEEEcCCHHH
Confidence 346899999999887444 44444444444 6888887776441 11111111 11111 1 23335556666666
Q ss_pred HHHhhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhc---CC
Q psy1765 128 IRARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYA---TG 204 (867)
Q Consensus 128 ~~a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A---~G 204 (867)
+.|-..+= ..+.+. .=..| +-|.+.++-.|+..| ..
T Consensus 127 a~a~~~~g--------------------------------~~~~~~-----~~~~v----r~gk~egm~~g~~la~~~g~ 165 (694)
T PRK14502 127 ANAIADAG--------------------------------YPELLG-----EDGLI----RSGKAEGMILGIILTMFSGR 165 (694)
T ss_pred HHHHHHcC--------------------------------ChhhhC-----CCCce----ecCcchHHHHHHHHHHhcCC
Confidence 66532111 000010 11123 346667777776555 46
Q ss_pred CEEEEEcCCcccCccchHHHHHHHHh
Q psy1765 205 KVLVFLDSHIEVNTHWLEPLLVPIAE 230 (867)
Q Consensus 205 d~llfLDaD~~v~p~wLe~Ll~~l~~ 230 (867)
+||-|+|+|-.+ |+.+.+.+..++.
T Consensus 166 ~yvgfidadny~-pg~v~ey~~~yaa 190 (694)
T PRK14502 166 DYVGFIDTDNYI-PGAVWEYAKHFAT 190 (694)
T ss_pred ceEeEeeccCCC-CchHHHHHHHHHh
Confidence 999999999987 4566666666553
|
|
| >cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU | Back alignment and domain information |
|---|
Probab=81.30 E-value=14 Score=38.24 Aligned_cols=58 Identities=17% Similarity=0.082 Sum_probs=44.6
Q ss_pred CEEEEEcCCCcCchhHHhHhhhhcC--CCEEEEEcCCc-ccCccchHHHHHHHHhcCCcee
Q psy1765 179 RVHLYRTSKREGLIRARMFGAKYAT--GKVLVFLDSHI-EVNTHWLEPLLVPIAERTNTVT 236 (867)
Q Consensus 179 ~vrii~~~~n~G~a~ArN~G~~~A~--Gd~llfLDaD~-~v~p~wLe~Ll~~l~~~~~~vv 236 (867)
+++++..+...|.+.+.-.|+.... .+.++++++|. .+.+..+..+++.+.+.+..++
T Consensus 63 ~~~~~~~~~~~g~~~ai~~a~~~~~~~~~~vli~~~D~p~~~~~~i~~l~~~~~~~~~~~~ 123 (229)
T cd02540 63 NVEFVLQEEQLGTGHAVKQALPALKDFEGDVLVLYGDVPLITPETLQRLLEAHREAGADVT 123 (229)
T ss_pred CcEEEECCCCCCCHHHHHHHHHhhccCCCeEEEEeCCccccCHHHHHHHHHHHHhcCCcEE
Confidence 5666766667788888888887664 68999999998 4688899999998876544443
|
The N-terminal domain of N-Acetylglucosamine-1-phosphate uridyltransferase (GlmU). GlmU is an essential bacterial enzyme with both an acetyltransferase and an uridyltransferase activity which have been mapped to the C-terminal and N-terminal domains, respectively. This family represents the N-terminal uridyltransferase. GlmU performs the last two steps in the synthesis of UDP-N-acetylglucosamine (UDP-GlcNAc), which is an essential precursor in both the peptidoglycan and the lipopolysaccharide metabolic pathways in Gram-positive and Gram-negative bacteria, respectively. |
| >cd04182 GT_2_like_f GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function | Back alignment and domain information |
|---|
Probab=81.30 E-value=9.2 Score=38.04 Aligned_cols=60 Identities=17% Similarity=0.178 Sum_probs=45.8
Q ss_pred CEEEEEcC-CCcCchhHHhHhhhhcC--CCEEEEEcCCc-ccCccchHHHHHHHHhcCCceeee
Q psy1765 179 RVHLYRTS-KREGLIRARMFGAKYAT--GKVLVFLDSHI-EVNTHWLEPLLVPIAERTNTVTVP 238 (867)
Q Consensus 179 ~vrii~~~-~n~G~a~ArN~G~~~A~--Gd~llfLDaD~-~v~p~wLe~Ll~~l~~~~~~vv~p 238 (867)
.+.++..+ ...|...+...|++.+. .|+++++.+|. .+++..++.+++.+..++..++.|
T Consensus 63 ~~~~~~~~~~~~G~~~~i~~al~~~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~v~~ 126 (186)
T cd04182 63 PVVVVINPDWEEGMSSSLAAGLEALPADADAVLILLADQPLVTAETLRALIDAFREDGAGIVAP 126 (186)
T ss_pred CeEEEeCCChhhCHHHHHHHHHHhccccCCEEEEEeCCCCCCCHHHHHHHHHHHHhCCCeEEEE
Confidence 34445443 34688888999998886 79999999999 568999999999887655556555
|
GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. |
| >cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis | Back alignment and domain information |
|---|
Probab=81.00 E-value=4 Score=41.14 Aligned_cols=36 Identities=19% Similarity=0.024 Sum_probs=28.4
Q ss_pred eEEEEeccchhhHHHhhhhhhhhccccccccceeEEEEEeCCCC
Q psy1765 116 VHLYRTSKREGLIRARMFGAKYATGKNRIQSLLHEIILVNDFSE 159 (867)
Q Consensus 116 ~~~~~~~~~~gi~~a~~~g~~~a~g~~~~~~~l~EIIVVDn~St 159 (867)
+++++.++|.|++.|+|.|+.+|+|+++ +++|+...
T Consensus 57 i~~i~~~~n~G~~~a~N~g~~~a~gd~i--------~~lD~Dd~ 92 (201)
T cd04195 57 LKVVPLEKNRGLGKALNEGLKHCTYDWV--------ARMDTDDI 92 (201)
T ss_pred eEEEEcCccccHHHHHHHHHHhcCCCEE--------EEeCCccc
Confidence 4566677889999999999999999875 46665543
|
AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. |
| >cd02517 CMP-KDO-Synthetase CMP-KDO synthetase catalyzes the activation of KDO which is an essential component of the lipopolysaccharide | Back alignment and domain information |
|---|
Probab=80.88 E-value=33 Score=35.89 Aligned_cols=61 Identities=11% Similarity=0.147 Sum_probs=38.9
Q ss_pred HHHHHHhhcCCCCEEEEEcC--CCcCchhHHhHhhhhcCC--CEEEEEcCCc-ccCccchHHHHHHHHhc
Q psy1765 167 EVESFVKGLNNGRVHLYRTS--KREGLIRARMFGAKYATG--KVLVFLDSHI-EVNTHWLEPLLVPIAER 231 (867)
Q Consensus 167 ~l~~~~~~~~~~~vrii~~~--~n~G~a~ArN~G~~~A~G--d~llfLDaD~-~v~p~wLe~Ll~~l~~~ 231 (867)
.+.+++... .++++..+ ...|.+++. .++..... |.++++++|. .+++..|..+++.+..+
T Consensus 53 ~i~~~~~~~---~~~~~~~~~~~~~gt~~~~-~~~~~~~~~~d~vlv~~gD~Pli~~~~l~~l~~~~~~~ 118 (239)
T cd02517 53 RIADAVESF---GGKVVMTSPDHPSGTDRIA-EVAEKLDADDDIVVNVQGDEPLIPPEMIDQVVAALKDD 118 (239)
T ss_pred HHHHHHHHc---CCEEEEcCcccCchhHHHH-HHHHhcCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhC
Confidence 355555443 35554432 234555433 33444444 8899999999 67899999999988665
|
CMP-KDO Synthetase: 3-Deoxy-D-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) catalyzes the conversion of CTP and 3-deoxy-D-manno-octulosonate into CMP-3-deoxy-D-manno-octulosonate (CMP-KDO) and pyrophosphate. KDO is an essential component of the lipopolysaccharide found in the outer surface of gram-negative eubacteria. It is also a constituent of the capsular polysaccharides of some gram-negative eubacteria. Its presence in the cell wall polysaccharides of green algae and plant were also discovered. However, they have not been found in yeast and animals. The absence of the enzyme in mammalian cells makes it an attractive target molecule for drug design. |
| >PRK05450 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=80.65 E-value=43 Score=35.17 Aligned_cols=130 Identities=14% Similarity=0.128 Sum_probs=61.9
Q ss_pred CCCEEEEEcCCc-ccCccchHHHHHHHHhcCCceeeeEEeeecCCCceeccccc-cccccccccccccccCCcCcCCCCC
Q psy1765 203 TGKVLVFLDSHI-EVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSAL-VRGGFNWGLHFKWENLPKGTLNSSE 280 (867)
Q Consensus 203 ~Gd~llfLDaD~-~v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~~~~~~~~~~-~~g~f~~~l~~~~~~~~~~~~~~~~ 280 (867)
..+.++++++|. .+++..|+.+++.+...+..++.......+........... ....-+.-..|.....+.. ....
T Consensus 90 ~~~~vlv~~~D~Pli~~~~l~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~g~v~~~~e~~~~~~--~~~~ 167 (245)
T PRK05450 90 DDDIVVNVQGDEPLIPPEIIDQVAEPLANPEADMATLAVPIHDAEEAFNPNVVKVVLDADGRALYFSRAPIPYG--RDAF 167 (245)
T ss_pred CCCEEEEecCCCCCCCHHHHHHHHHHHhcCCCCeEeeeeecCCHHHhcCcCCCEEEeCCCCcEEEecCCCCCCC--CCcc
Confidence 468899999999 67999999999988765444443322211111000000000 0000000011111111110 0000
Q ss_pred CCCCcccccccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEE
Q psy1765 281 DFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMI 337 (867)
Q Consensus 281 ~~~~p~~~~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~ 337 (867)
.... ..+.....|+..++++.+..+-...+... .-.+..++ .++...|+++..+
T Consensus 168 ~~~~-~~~~~~~~Giy~~~~~~l~~~~~~~~~~~-~~~~~~~~-~~~~~~g~~v~~~ 221 (245)
T PRK05450 168 ADSA-PTPVYRHIGIYAYRRGFLRRFVSLPPSPL-EKIESLEQ-LRALENGYRIHVV 221 (245)
T ss_pred cccc-CccccEEEEEEecCHHHHHHHHhCCCCcc-ccchhHHH-HHHHHCCCceEEE
Confidence 0000 11345667889999999988754433321 10133333 4777889887554
|
|
| >PLN02915 cellulose synthase A [UDP-forming], catalytic subunit | Back alignment and domain information |
|---|
Probab=80.47 E-value=6.3 Score=49.52 Aligned_cols=168 Identities=14% Similarity=0.156 Sum_probs=96.2
Q ss_pred CCCCcEEEEEEeCC---CChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchh--hHHHHHh--------------
Q psy1765 49 STLPSTSVIICFYN---EHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHG--EVETFVK-------------- 109 (867)
Q Consensus 49 ~~~P~vSVIIp~yN---e~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~--~~~~~~~-------------- 109 (867)
+.+|.|-|.|++-+ |+.-.+..||-||++-+||.-..-+.|-|||.+.-+ +.+ |..+|++
T Consensus 284 ~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LT-f~AL~EAa~FAk~WvPFCkK~~IepR 362 (1044)
T PLN02915 284 NRLAPVDVFVSTVDPLKEPPIITANTVLSILAVDYPVDKVSCYVSDDGASMLL-FDTLSETAEFARRWVPFCKKHNIEPR 362 (1044)
T ss_pred ccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHhH-HHHHHHHHHHHHhhcchhhhcCCCcC
Confidence 45999999999964 666689999999999999976557889999977542 111 1122222
Q ss_pred ---hcCCCceEEE-------Eeccchhh------HHHhhhhhhh------------hcccccc-------ccceeEEEEE
Q psy1765 110 ---GLNDGRVHLY-------RTSKREGL------IRARMFGAKY------------ATGKNRI-------QSLLHEIILV 154 (867)
Q Consensus 110 ---~~~~~~~~~~-------~~~~~~gi------~~a~~~g~~~------------a~g~~~~-------~~~l~EIIVV 154 (867)
..+.+.+... ...+++-+ ...|+.++.. +.|..=. ++|+ +|+ .
T Consensus 363 aPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~~~~~~~~m~dgt~W~g~~~~dHp~II-qVl-l 440 (1044)
T PLN02915 363 APEFYFSQKIDYLKDKVQPTFVKERRAMKREYEEFKVRINALVAKAQKKPEEGWVMQDGTPWPGNNTRDHPGMI-QVY-L 440 (1044)
T ss_pred CHHHHhccCCCccccccCchhHHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccccCCccCCCCCCCCCccce-EEe-e
Confidence 1111111111 11122222 1223333221 1111000 1111 222 2
Q ss_pred eCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcC-----chhHHhHhhhhc----CCCEEEEEcCCccc-CccchHHH
Q psy1765 155 NDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREG-----LIRARMFGAKYA----TGKVLVFLDSHIEV-NTHWLEPL 224 (867)
Q Consensus 155 Dn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G-----~a~ArN~G~~~A----~Gd~llfLDaD~~v-~p~wLe~L 224 (867)
|+ +.+ ..+ +. ..+ |.+.++..+++.| .|+|+|+-++.+ .++||+-||.|..+ ++..+...
T Consensus 441 ~~-~~~-~d~----~g--~~l--P~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~iLNlDCDmY~Nns~a~r~A 510 (1044)
T PLN02915 441 GS-EGA-LDV----EG--KEL--PRLVYVSREKRPGYNHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKAVREA 510 (1044)
T ss_pred cC-CCC-ccc----cc--Ccc--ceeEEEecccCCCCCcchhhhhhhhHhhhhheeecCcEEEeeccccccCcchhhHhh
Confidence 32 221 000 00 013 7888998888877 578999988877 79999999999998 57777666
Q ss_pred HHHHH
Q psy1765 225 LVPIA 229 (867)
Q Consensus 225 l~~l~ 229 (867)
+=.+.
T Consensus 511 MCf~l 515 (1044)
T PLN02915 511 MCFLM 515 (1044)
T ss_pred ceeee
Confidence 55554
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 867 | ||||
| 2ffu_A | 501 | Crystal Structure Of Human Ppgalnact-2 Complexed Wi | 2e-78 | ||
| 2ffu_A | 501 | Crystal Structure Of Human Ppgalnact-2 Complexed Wi | 5e-16 | ||
| 2ffu_A | 501 | Crystal Structure Of Human Ppgalnact-2 Complexed Wi | 2e-06 | ||
| 1xhb_A | 472 | The Crystal Structure Of Udp-Galnac: Polypeptide Al | 9e-74 | ||
| 1xhb_A | 472 | The Crystal Structure Of Udp-Galnac: Polypeptide Al | 8e-15 | ||
| 1xhb_A | 472 | The Crystal Structure Of Udp-Galnac: Polypeptide Al | 1e-05 | ||
| 2d7i_A | 570 | Crsytal Structure Of Pp-Galnac-T10 With Udp, Galnac | 5e-69 | ||
| 2d7i_A | 570 | Crsytal Structure Of Pp-Galnac-T10 With Udp, Galnac | 5e-13 | ||
| 2d7i_A | 570 | Crsytal Structure Of Pp-Galnac-T10 With Udp, Galnac | 3e-05 |
| >pdb|2FFU|A Chain A, Crystal Structure Of Human Ppgalnact-2 Complexed With Udp And Ea2 Length = 501 | Back alignment and structure |
|
| >pdb|2FFU|A Chain A, Crystal Structure Of Human Ppgalnact-2 Complexed With Udp And Ea2 Length = 501 | Back alignment and structure |
|
| >pdb|2FFU|A Chain A, Crystal Structure Of Human Ppgalnact-2 Complexed With Udp And Ea2 Length = 501 | Back alignment and structure |
|
| >pdb|1XHB|A Chain A, The Crystal Structure Of Udp-Galnac: Polypeptide Alpha-N- Acetylgalactosaminyltransferase-T1 Length = 472 | Back alignment and structure |
|
| >pdb|1XHB|A Chain A, The Crystal Structure Of Udp-Galnac: Polypeptide Alpha-N- Acetylgalactosaminyltransferase-T1 Length = 472 | Back alignment and structure |
|
| >pdb|1XHB|A Chain A, The Crystal Structure Of Udp-Galnac: Polypeptide Alpha-N- Acetylgalactosaminyltransferase-T1 Length = 472 | Back alignment and structure |
|
| >pdb|2D7I|A Chain A, Crsytal Structure Of Pp-Galnac-T10 With Udp, Galnac And Mn2+ Length = 570 | Back alignment and structure |
|
| >pdb|2D7I|A Chain A, Crsytal Structure Of Pp-Galnac-T10 With Udp, Galnac And Mn2+ Length = 570 | Back alignment and structure |
|
| >pdb|2D7I|A Chain A, Crsytal Structure Of Pp-Galnac-T10 With Udp, Galnac And Mn2+ Length = 570 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* Length = 570 | Back alignment and structure |
|---|
Score = 348 bits (894), Expect = e-110
Identities = 178/593 (30%), Positives = 256/593 (43%), Gaps = 107/593 (18%)
Query: 1 MVLNEQDLITRDEGYRYYGFNALISNKLSLDRKIPDTRNSLCANQTFPSTLPSTSVIICF 60
D D+ YR GFN +S+K+SL+R +PD R+ C ++ + TLP+TS+
Sbjct: 61 RPYPMTDAERVDQAYRENGFNIYVSDKISLNRSLPDIRHPNCNSKRYLETLPNTSI---- 116
Query: 61 YNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYR 120
II N+G L R
Sbjct: 117 --------------------------IIPF--------------------HNEGWSSLLR 130
Query: 121 TSKREGLIRARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRV 180
T ++ L+ EI+LV+DFS+ L +E ++ + V
Sbjct: 131 TV--------------HSVLNRSPPELVAEIVLVDDFSDREH-LKKPLEDYMALFPS--V 173
Query: 181 HLYRTSKREGLIRARMFGAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPII 240
+ RT KREGLIR RM GA ATG V+ FLDSH E N +WL PLL IA T+ P+I
Sbjct: 174 RILRTKKREGLIRTRMLGASVATGDVITFLDSHCEANVNWLPPLLDRIARNRKTIVCPMI 233
Query: 241 DIINADTFQY--TSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMAGGLFAI 298
D+I+ D F+Y + +RG F+W +++K +P D P SP MAGGLFA+
Sbjct: 234 DVIDHDDFRYETQAGDAMRGAFDWEMYYKRIPIPPELQK--ADPSDPFESPVMAGGLFAV 291
Query: 299 DRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGHVFRSRRPYNNGHNE 358
DR++F LG YD GLEIWGGE E+SF++WMCGG + IPCSR+GH++R PY
Sbjct: 292 DRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGRMEDIPCSRVGHIYRKYVPYKV-PAG 350
Query: 359 DPLTRNSLRVAHVWMDEYIEHFLKQRPEARNIDYGDVTDRKQLRARLGCKSFKWYLDNVY 418
L RN RVA VWMDEY E+ ++RPE R++ GDV +K+LR+ L CKSFKW++ +
Sbjct: 351 VSLARNLKRVAEVWMDEYAEYIYQRRPEYRHLSAGDVAVQKKLRSSLNCKSFKWFMTKIA 410
Query: 419 PEMILPSDDEERLKKKWAQVEQPKFQPWYSRARNYTNSL------RVAHVWMDEYIEHFL 472
++ E W ++ RN L +
Sbjct: 411 WDLPKFYPPVEPPAAAWGEI------------RNVGTGLCADTKHGALGSPLRLEGCVRG 458
Query: 473 KQRPEARNIDYGDVTDRKQLRARLGCKSFKWYLDNVYPEMILPSDDEERLKKKWAQVEQP 532
+ N+ T R+ +R + K+ D +
Sbjct: 459 RGEAAWNNMQVFTFTWREDIRPGDPQHTKKFCFD--------AISHTSPVTLYDCH-SMK 509
Query: 533 KFQPWYSRARNYTSHFHIRLSSTDLCLTSKVDKTKGSPLVLKKCDELSKTQHW 585
Q W Y + + C+ + + + C+ S TQ W
Sbjct: 510 GNQLW-----KYRKDKTLYHPVSGSCMDCSESDHR---IFMNTCNPSSLTQQW 554
|
| >2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* Length = 570 | Back alignment and structure |
|---|
Score = 121 bits (304), Expect = 7e-29
Identities = 61/276 (22%), Positives = 94/276 (34%), Gaps = 88/276 (31%)
Query: 453 YTNSLRVAHVWMDEYIEHFLKQRPEARNIDYGDVTDRKQLRARLGCKSFKWYLDNVYPEM 512
N RVA VWMDEY E+ ++RPE R++ GDV +K+LR+ L CKSFKW++ + ++
Sbjct: 354 ARNLKRVAEVWMDEYAEYIYQRRPEYRHLSAGDVAVQKKLRSSLNCKSFKWFMTKIAWDL 413
Query: 513 ILPSDDEERLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSSTDLCLTSKVDKTKGSPLV 572
E W IR T LC +K GSPL
Sbjct: 414 PKFYPPVEPPAAAW---------------------GEIRNVGTGLCADTK-HGALGSPLR 451
Query: 573 LKKC------DELSKTQHWSKTDKSELVLAEL-----LCLDAGA--TKPKLTKCHEMGGS 619
L+ C + Q ++ T + ++ + C DA + + L CH M G+
Sbjct: 452 LEGCVRGRGEAAWNNMQVFTFTWREDIRPGDPQHTKKFCFDAISHTSPVTLYDCHSMKGN 511
Query: 620 QEYWCWLRCKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNYTSHFH 679
Q W Y
Sbjct: 512 Q-----------LW---------------------------------------KYRKDKT 521
Query: 680 IRLSGTDLCLTSKVDKTKGSPLVLKKCDELSKTQRW 715
+ + C+ + + + C+ S TQ+W
Sbjct: 522 LYHPVSGSCMDCSESDHR---IFMNTCNPSSLTQQW 554
|
| >2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* Length = 570 | Back alignment and structure |
|---|
Score = 91.1 bits (225), Expect = 4e-19
Identities = 43/186 (23%), Positives = 67/186 (36%), Gaps = 40/186 (21%)
Query: 626 LRCKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSGT 685
L CKSFKW++ + ++ + W IR GT
Sbjct: 397 LNCKSFKWFMTKIAWDLPKFYPPVEPPAAAW---------------------GEIRNVGT 435
Query: 686 DLCLTSKVDKTKGSPLVLKKC------DELSKTQRWSKTDKSELVLAEL-----LCLDAG 734
LC +K GSPL L+ C + Q ++ T + ++ + C DA
Sbjct: 436 GLCADTK-HGALGSPLRLEGCVRGRGEAAWNNMQVFTFTWREDIRPGDPQHTKKFCFDAI 494
Query: 735 A--TKPKLTKCHEMGGSQEWNFVLRDKTPIYSPATGTCLGSKNRLENTVIVMEMCAQHKD 792
+ + L CH M G+Q W + R +Y P +G+C+ + I M C
Sbjct: 495 SHTSPVTLYDCHSMKGNQLWKY--RKDKTLYHPVSGSCMDCSE--SDHRIFMNTCNPSSL 550
Query: 793 T-SWDL 797
T W
Sbjct: 551 TQQWLF 556
|
| >2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* Length = 501 | Back alignment and structure |
|---|
Score = 324 bits (830), Expect = e-101
Identities = 183/596 (30%), Positives = 268/596 (44%), Gaps = 128/596 (21%)
Query: 2 VLNEQDLITRDEGYRYYGFNALISNKLSLDRKIPDTRNSLCANQTFPSTLPSTSVIICFY 61
+ + + + Y FN + S+KL +DR IPDTR
Sbjct: 16 YVGGTMVRSGQDPYARNKFNQVESDKLRMDRAIPDTR----------------------- 52
Query: 62 NEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRT 121
H + + L T +++ N+ R L RT
Sbjct: 53 --HDQCQRKQWRVDLPATS------VVITF-------------------HNEARSALLRT 85
Query: 122 SKREGLIRARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVH 181
+ K L+ EIILV+D+S P + + K V
Sbjct: 86 V--------------VSVLKKSPPHLIKEIILVDDYSNDPED-GALLGKIEK------VR 124
Query: 182 LYRTSKREGLIRARMFGAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIID 241
+ R +REGL+R+R+ GA A KVL FLDSH E N HWLEPLL +AE V PIID
Sbjct: 125 VLRNDRREGLMRSRVRGADAAQAKVLTFLDSHCECNEHWLEPLLERVAEDRTRVVSPIID 184
Query: 242 IINADTFQYT-SSALVRGGFNWGLHFKWENL-PKGTLNSSEDFIKPILSPTMAGGLFAID 299
+IN D FQY +SA ++GGF+W L FKW+ + P+ + + + PI +P +AGGLF +D
Sbjct: 185 VINMDNFQYVGASADLKGGFDWNLVFKWDYMTPEQRRSRQGNPVAPIKTPMIAGGLFVMD 244
Query: 300 RQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGHVFRSRRPY-NNGHNE 358
+ YF+ LG+YD +++WGGENLE+SFR+W CGGSL +IPCSR+GHVFR + PY G +
Sbjct: 245 KFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVFRKQHPYTFPGGSG 304
Query: 359 DPLTRNSLRVAHVWMDEYIEHFLKQRPEARNIDYGDVTDRKQLRARLGCKSFKWYLDNVY 418
RN+ R A VWMDEY + P ARN+ YG++ R +LR +L CK FKWYL+NVY
Sbjct: 305 TVFARNTRRAAEVWMDEYKNFYYAAVPSARNVPYGNIQSRLELRKKLSCKPFKWYLENVY 364
Query: 419 PEMILPSDDEERLKKKWAQVEQPKFQPWYSRARNYTNSLRVAH--------VWMDEYIEH 470
PE+ +P + + ++Q + + V W
Sbjct: 365 PELRVPDHQD----IAFGALQQGT-NCLDTLGHFADGVVGVYECHNAGGNQEWA------ 413
Query: 471 FLKQRPEARNIDYGDVTDRKQLRARLGCKSFKWYLDNVYPEMILPSDDEERLKKKWAQVE 530
+T K ++ C + ++ E ++KW Q+E
Sbjct: 414 ---------------LTKEKSVKHMDLCLTVVDRAPGSLIKLQ--GCRENDSRQKWEQIE 456
Query: 531 QPKFQPWYSRARNYTSHFHIRLSSTDLCLTSKVDKTKGSPLVLKKCDELSKTQHWS 586
+R ++LCL S+ K+ G L ++ C + +Q W
Sbjct: 457 GNS---------------KLRHVGSNLCLDSRTAKSGG--LSVEVCGP-ALSQQWK 494
|
| >2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* Length = 501 | Back alignment and structure |
|---|
Score = 120 bits (301), Expect = 1e-28
Identities = 66/284 (23%), Positives = 97/284 (34%), Gaps = 85/284 (29%)
Query: 437 QVEQPKFQPWYSRARNYTNSLRVAHVWMDEYIEHFLKQRPEARNIDYGDVTDRKQLRARL 496
+ + P P S N+ R A VWMDEY + P ARN+ YG++ R +LR +L
Sbjct: 292 RKQHPYTFPGGSGTVFARNTRRAAEVWMDEYKNFYYAAVPSARNVPYGNIQSRLELRKKL 351
Query: 497 GCKSFKWYLDNVYPEMILPSDDEERLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSSTD 556
CK FKWYL+NVYPE+ +P L
Sbjct: 352 SCKPFKWYLENVYPELRVPDH---------------------------QDIAFGALQQGT 384
Query: 557 LCLTSKVDKTKGSPLVLKKCDELSKTQHWSKTDKSELVLAELLCLDAGATKPK----LTK 612
CL + + + +C Q W+ T + + + LCL P L
Sbjct: 385 NCLDTL-GHFADGVVGVYECHNAGGNQEWALTKEKSVKHMD-LCLTVVDRAPGSLIKLQG 442
Query: 613 CHEMGGSQEYWCWLRCKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRAR 672
C E Q KW Q+E
Sbjct: 443 CRENDSRQ----------------------------------KWEQIEGNS--------- 459
Query: 673 NYTSHFHIRLSGTDLCLTSKVDKTKGSPLVLKKCDELSKTQRWS 716
+R G++LCL S+ K+ G L ++ C + +Q+W
Sbjct: 460 ------KLRHVGSNLCLDSRTAKSGG--LSVEVCGP-ALSQQWK 494
|
| >2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* Length = 501 | Back alignment and structure |
|---|
Score = 93.3 bits (231), Expect = 5e-20
Identities = 36/177 (20%), Positives = 58/177 (32%), Gaps = 35/177 (19%)
Query: 626 LRCKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSGT 685
L CK FKWYL+NVYPE+ +P L
Sbjct: 351 LSCKPFKWYLENVYPELRVPDH---------------------------QDIAFGALQQG 383
Query: 686 DLCLTSKVDKTKGSPLVLKKCDELSKTQRWSKTDKSELVLAELLCLDAGATKPK----LT 741
CL + + + +C Q W+ T + + + LCL P L
Sbjct: 384 TNCLDTL-GHFADGVVGVYECHNAGGNQEWALTKEKSVKHMD-LCLTVVDRAPGSLIKLQ 441
Query: 742 KCHEMGGSQEWNFVLRDKTPIYSPATGTCLGSKNRLENTVIVMEMCAQHKDTSWDLV 798
C E Q+W + + + + CL S+ ++ + +E+C W
Sbjct: 442 GCRENDSRQKWEQIEGNSK-LRHVGSNLCLDSRTA-KSGGLSVEVCGPALSQQWKFT 496
|
| >1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Length = 472 | Back alignment and structure |
|---|
Score = 308 bits (791), Expect = 2e-96
Identities = 150/450 (33%), Positives = 224/450 (49%), Gaps = 55/450 (12%)
Query: 145 QSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATG 204
+ ++ EI+LV+D SE L +ES+VK L VH+ R +R GLIRAR+ GA + G
Sbjct: 58 RHMIEEIVLVDDASERD-FLKRPLESYVKKLK-VPVHVIRMEQRSGLIRARLKGAAVSRG 115
Query: 205 KVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYT-SSALVRGGFNWG 263
+V+ FLD+H E WLEPLL I TV PIID+I+ DTF+Y S + GGFNW
Sbjct: 116 QVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWK 175
Query: 264 LHFKWENLPKGTLNS-SEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLE 322
L+F+W +P+ ++ D P+ +PTMAGGLF+IDR YF +G YDAG++IWGGENLE
Sbjct: 176 LNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLE 235
Query: 323 LSFRIWMCGGSLAMIPCSRIGHVFRSRRPYN-NGHNEDPLTRNSLRVAHVWMDEYIEHFL 381
+SFRIW CGG+L ++ CS +GHVFR PY G + +N+ R+A VWMDE+ F
Sbjct: 236 ISFRIWQCGGTLEIVTCSHVGHVFRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFY 295
Query: 382 KQRPEARNIDYGDVTDRKQLRARLGCKSFKWYLDNVYPEMILPSDDEERLKKKWAQVEQP 441
P +DYGD++ R LR +L CK F WYL+N+YP+ +P + + +
Sbjct: 296 IISPGVTKVDYGDISSRLGLRRKLQCKPFSWYLENIYPDSQIPRHYFSLGEIRNVETN-- 353
Query: 442 KFQPWYSRARNYTNSLRVAH------VWMDEYIEHFLKQRPEARNIDYGDVTDRKQLRAR 495
+ +R N + H V+ T K++R
Sbjct: 354 QCLDNMARKENEKVGIFNCHGMGGNQVFS---------------------YTANKEIRTD 392
Query: 496 LGCKSFKWYLDNVYPEMILPSDDEERLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSST 555
C + + + + + + W ++ ++
Sbjct: 393 DLC----LDVSKLNGPVTMLKCHHLKGNQLWEYDPVKL---------------TLQHVNS 433
Query: 556 DLCLTSKVDKTKGSPLVLKKCDELSKTQHW 585
+ CL ++ ++ C S++Q W
Sbjct: 434 NQCLDKATEEDSQ-VPSIRDCTG-SRSQQW 461
|
| >1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Length = 472 | Back alignment and structure |
|---|
Score = 135 bits (341), Expect = 7e-34
Identities = 47/120 (39%), Positives = 76/120 (63%), Gaps = 2/120 (1%)
Query: 25 SNKLSLDRKIPDTRNSLCANQTFPSTLPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLL 84
S ++L+R +PD R C + +P LP+TSV+I F+NE +TL R+V ++++R+ + ++
Sbjct: 2 SEMIALNRSLPDVRLEGCKTKVYPDNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMI 61
Query: 85 HEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRARMFGAKYATGKNRI 144
EI+LV+D SE L +E++VK L VH+ R +R GLIRAR+ GA + G+
Sbjct: 62 EEIVLVDDASERD-FLKRPLESYVKKLK-VPVHVIRMEQRSGLIRARLKGAAVSRGQVIT 119
|
| >1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Length = 472 | Back alignment and structure |
|---|
Score = 119 bits (299), Expect = 1e-28
Identities = 57/266 (21%), Positives = 93/266 (34%), Gaps = 81/266 (30%)
Query: 452 NYTNSLRVAHVWMDEYIEHFLKQRPEARNIDYGDVTDRKQLRARLGCKSFKWYLDNVYPE 511
N+ R+A VWMDE+ F P +DYGD++ R LR +L CK F WYL+N+YP+
Sbjct: 275 INKNNRRLAEVWMDEFKNFFYIISPGVTKVDYGDISSRLGLRRKLQCKPFSWYLENIYPD 334
Query: 512 MILPSDDEERLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSSTDLCLTSKVDKTKGSPL 571
+P Y S IR T+ CL + + + + +
Sbjct: 335 SQIPRH--------------------------YFSLGEIRNVETNQCLDN-MARKENEKV 367
Query: 572 VLKKCDELSKTQHWSKTDKSELVLAELLCLDAGA--TKPKLTKCHEMGGSQEYWCWLRCK 629
+ C + Q +S T E+ + LCLD + KCH + G+Q
Sbjct: 368 GIFNCHGMGGNQVFSYTANKEIRTDD-LCLDVSKLNGPVTMLKCHHLKGNQ--------- 417
Query: 630 SFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSGTDLCL 689
W D ++ ++ CL
Sbjct: 418 --LWEYDP--------------------------------------VKLTLQHVNSNQCL 437
Query: 690 TSKVDKTKGSPLVLKKCDELSKTQRW 715
++ ++ C S++Q+W
Sbjct: 438 DKATEEDSQ-VPSIRDCTG-SRSQQW 461
|
| >1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Length = 472 | Back alignment and structure |
|---|
Score = 104 bits (259), Expect = 2e-23
Identities = 40/174 (22%), Positives = 66/174 (37%), Gaps = 31/174 (17%)
Query: 626 LRCKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSGT 685
L+CK F WYL+N+YP+ +P Y S IR T
Sbjct: 319 LQCKPFSWYLENIYPDSQIPRH--------------------------YFSLGEIRNVET 352
Query: 686 DLCLTSKVDKTKGSPLVLKKCDELSKTQRWSKTDKSELVLAELLCLDAGA--TKPKLTKC 743
+ CL + + + + + + C + Q +S T E+ + LCLD + KC
Sbjct: 353 NQCLDN-MARKENEKVGIFNCHGMGGNQVFSYTANKEIRTDD-LCLDVSKLNGPVTMLKC 410
Query: 744 HEMGGSQEWNFVLRDKTPIYSPATGTCLGSKNRLENTVIVMEMCAQHKDTSWDL 797
H + G+Q W + K + + CL ++ V + C + W L
Sbjct: 411 HHLKGNQLWEYD-PVKLTLQHVNSNQCLDKATEEDSQVPSIRDCTGSRSQQWLL 463
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 65.6 bits (159), Expect = 6e-11
Identities = 80/570 (14%), Positives = 169/570 (29%), Gaps = 162/570 (28%)
Query: 79 TGQSLLH--EIILVN------DFSEYPSNLHGEVETFVKG-LNDGRV-HLYRTSKREGLI 128
TG+ +I+ V +F +V+ K L+ + H+ +
Sbjct: 11 TGEHQYQYKDILSVFEDAFVDNFDCK------DVQDMPKSILSKEEIDHIIMSKDAVSGT 64
Query: 129 RARMFGAKYATGKNRIQSLLHEIILVN--------------------DFSEYPSNLHGEV 168
R+F + + +Q + E++ +N + E L+ +
Sbjct: 65 L-RLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDN 123
Query: 169 ESFVKGLNNGRVHLYRTSKREGLIRAR---------MFGAKYATGK-VL---VFLDSHIE 215
+ F K N R+ Y R+ L+ R + G+ GK + V L ++
Sbjct: 124 QVFAK-YNVSRLQPY-LKLRQALLELRPAKNVLIDGVLGS----GKTWVALDVCLSYKVQ 177
Query: 216 V----NTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSS--ALVRGGFNWGLHFKWE 269
WL + + T +++++ +Q + + N L
Sbjct: 178 CKMDFKIFWLN-----LKNCNSPET--VLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSI 230
Query: 270 NLPKGTLNSSEDFIKPIL------SPTMAGGLFAI---------DRQYFDSLG------- 307
L S+ + +L + F + +Q D L
Sbjct: 231 QAELRRLLKSKPYENCLLVLLNVQNAKAWNA-FNLSCKILLTTRFKQVTDFLSAATTTHI 289
Query: 308 ---QYDAGLEIWGGENLELSFRIW-----------MCGGS---LAMIPCSRIGHVFRSRR 350
+ L E L + + + L++I S +
Sbjct: 290 SLDHHSMTLT--PDEVKSL-LLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDN 346
Query: 351 PYNNGHNEDPLTR-NSLRVAHVWMDEYIEHFLKQR--PEARNI------------DYGDV 395
+ + N D LT + + EY + F + P + +I DV
Sbjct: 347 -WKH-VNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDV 404
Query: 396 TD------RKQLRARLGCKSFKWYLDNVYPEMILPSDDEERLKKKWAQVEQPKFQPWYSR 449
+ L + K + ++Y E+ + ++E L + V+ Y+
Sbjct: 405 MVVVNKLHKYSLVEK-QPKESTISIPSIYLELKVKLENEYALHRSI--VDH------YNI 455
Query: 450 ARNYTNSLRVAHVWMDEYIEHF----LKQRPEARNID-----YGDVT--DRKQLRARLGC 498
+ + + + ++D+Y LK + + D ++K
Sbjct: 456 PKTFDSD-DLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAW 514
Query: 499 KSFKWYLDNV-----YPEMILPSDDE-ERL 522
+ L+ + Y I +D + ERL
Sbjct: 515 NASGSILNTLQQLKFYKPYICDNDPKYERL 544
|
| >2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Length = 625 | Back alignment and structure |
|---|
Score = 62.7 bits (152), Expect = 4e-10
Identities = 43/274 (15%), Positives = 81/274 (29%), Gaps = 28/274 (10%)
Query: 144 IQSLLH-------EIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARM 196
+ L + E+I+ +D S N+ V F ++ + L R
Sbjct: 112 LACLCNQKTIYDYEVIVADDGS--KENIEEIVREFES--LLNIKYVRQKDYGYQLCAVRN 167
Query: 197 FGAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALV 256
G + A + LD + N W++ + +A N + I+ Y
Sbjct: 168 LGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQ 227
Query: 257 RGGFNWG--LHFKWENLPKGTLNSSEDFIKPILSPT------------MAGGLFAIDRQY 302
+ N + + K N S D+ T +GG A +++
Sbjct: 228 KSLINEIPEIITNNQVAGKVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKW 287
Query: 303 FDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGHVFRSRRPYNNGHNEDPLT 362
G +D WGGE+ E +R++ G + + P +
Sbjct: 288 LFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRSVE---GAMAYHQEPPGKENETDRAAG 344
Query: 363 RNSLRVAHVWMDEYIEHFLKQRPEARNIDYGDVT 396
+N Y ++ A V+
Sbjct: 345 KNITVQLLQQKVPYFYRKKEKIESATLKRVPLVS 378
|
| >2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Length = 625 | Back alignment and structure |
|---|
Score = 44.9 bits (106), Expect = 1e-04
Identities = 23/191 (12%), Positives = 57/191 (29%), Gaps = 36/191 (18%)
Query: 144 IQSLLH------EIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMF 197
++S L+ E+ + +D S + ++ N+ RV K +G+ A
Sbjct: 394 VESALNQTITDLEVCICDDGSTDDT--LRILQEHYA--NHPRVRFISQ-KNKGIGSASNT 448
Query: 198 GAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTV-PIIDIINADTFQYTSSALV 256
+ G + LDS + +E L + + V I+ +
Sbjct: 449 AVRLCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDRE---------- 498
Query: 257 RGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIW 316
G + W + L S + + ++ ++ +
Sbjct: 499 --GNLISNGYNWPIYSREKL----------TSAMICHHFRMFTARAWNLTEGFNESIS-- 544
Query: 317 GGENLELSFRI 327
+ ++ ++
Sbjct: 545 NAVDYDMYLKL 555
|
| >2aai_B Ricin (B chain); glycosidase; HET: GAL BGC NDG NAG BMA MAN; 2.50A {Ricinus communis} SCOP: b.42.2.1 b.42.2.1 PDB: 3rti_B* 3rtj_B* 1rzo_B* Length = 262 | Back alignment and structure |
|---|
Score = 55.1 bits (132), Expect = 3e-08
Identities = 37/218 (16%), Positives = 65/218 (29%), Gaps = 25/218 (11%)
Query: 552 LSSTDLCLTSKVDKTKGSPLVLKKCDELSKT-QHWSKTDKSELVLAEL-LCLDAG----A 605
+ S CLT+ + G +++ C+ + W D ++ L L A
Sbjct: 57 IRSNGKCLTTY-GYSPGVYVMIYDCNTAATDATRWQIWDNGTIINPRSSLVLAATSGNSG 115
Query: 606 TKPKLTKCHEMGGSQEYWCWLRCKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQ 665
T + + W + L ++ + Q
Sbjct: 116 TTLTVQTNI--YAVSQGWLPTNNTQPFVTTIVGLYGLCLQANSGQV--WIEDCSSEKAEQ 171
Query: 666 PWYSRARNYTSHFHIR-LSGTDLCLTSKVDKTKGSPLVLKKCDELSKTQRWSKTDKSELV 724
W + IR D CLTS + + + + C S QRW + ++
Sbjct: 172 QWA-----LYADGSIRPQQNRDNCLTSD-SNIRETVVKILSCGPASSGQRWMFKNDGTIL 225
Query: 725 LAEL-LCLDAGATKPKLTK-----CHEMGGSQEWNFVL 756
L LD A+ P L + H +Q W +
Sbjct: 226 NLYSGLVLDVRASDPSLKQIILYPLHG-DPNQIWLPLF 262
|
| >1vcl_A Hemolytic lectin CEL-III; hemolysis, hemagglutination, pore-forming, calcium, toxin; HET: BTB; 1.70A {Cucumaria echinata} SCOP: b.42.2.1 b.42.2.1 d.281.1.1 PDB: 2z48_A* 2z49_A* Length = 432 | Back alignment and structure |
|---|
Score = 55.1 bits (132), Expect = 6e-08
Identities = 39/282 (13%), Positives = 80/282 (28%), Gaps = 33/282 (11%)
Query: 550 IRLSSTDLCLTSKVDKTKGSPLVLKKCDELSKTQHWSKTDKSELVLAEL-LCLDA---GA 605
+R + C+ ++ + CD LS Q + C G
Sbjct: 13 LRSFKSKQCVDIVGNQG-SGNIATYDCDGLS-DQQIIICGDGTIRNEARNYCFTPDGSGN 70
Query: 606 TKPKLTKCHEMGGSQEYWCWLRCKSFKWYLDNVYPEMI-------------LPSDDEDRL 652
+ C W + + + + ++ + D
Sbjct: 71 ANVMSSPCTLYPEIPSSQRWRQGRRKTFTDNGGIEQVATEIINLASGKCLDIEGSDGTGD 130
Query: 653 KKKWAQVEQPKFQPWYSRAR-NYTSHFHIRLSGTDLCLTSKVDKTKGSPLVLKKCDELSK 711
+ Q +Y R+R + +R +DLCL + +++ C++ +
Sbjct: 131 IGVYDCQNLDD-QYFYVRSRGPELFYGRLRNEKSDLCLDVE-GSDGKGNVLMYSCED-NL 187
Query: 712 TQRWSKTDKSELV-LAELLCLD----AGATKPKLTKCHEMGGSQEWNF----VLRDKTPI 762
Q + + E+V +CLD G+ + +C + Q W+ D
Sbjct: 188 DQWFRYYENGEIVNAKSGMCLDVEGSDGSGNVGIYRCDD-LRDQMWSRPNAYCNGDYCSF 246
Query: 763 YSPATGTCLGSKNRLENTVIVMEMCAQHKDTSWDLVPVGSLV 804
+ + CL + C D + V V
Sbjct: 247 LNKESNKCLDVSGDQGTGDVGTWQCDGLPDQRFKWVFDDWEV 288
|
| >1m2t_B Mistletoe lectin I B chain; ribosome inactivation, ribosome inhibitor, hydrolase; HET: NAG FUC ADE; 1.89A {Viscum album} SCOP: b.42.2.1 b.42.2.1 PDB: 2r9k_B* 3d7w_B* 3cef_B* 1sz6_B* 1pum_B* 1puu_B* 2rg9_B* 3o5w_B* 1onk_B* 1oql_B* 1tfm_B* 1pc8_B* 1yf8_B* 1ce7_B* 2mll_B* Length = 263 | Back alignment and structure |
|---|
Score = 52.9 bits (126), Expect = 1e-07
Identities = 33/217 (15%), Positives = 65/217 (29%), Gaps = 25/217 (11%)
Query: 552 LSSTDLCLTSKVDKTKGSPLVLKKCDELSKT-QHWSKTDKSELV-LAELLCLDAG----A 605
+ S CLT+ T G +++ C+ + W ++ L L A
Sbjct: 58 IRSNGSCLTTYGY-TAGVYVMIFDCNTAVREATIWQIWGNGTIINPRSNLVLAASSGIKG 116
Query: 606 TKPKLTKCHEMGGSQEYWCWLRCKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQ 665
T + + W + + + ++ + + + Q
Sbjct: 117 TTLTVQTLD--YTLGQGWLAGNDTAPRETTIYGFRDLCM--ESAGGSVYVETCTAGQENQ 172
Query: 666 PWYSRARNYTSHFHIRL-SGTDLCLTSKVDKTKGSPLVLKKCDELSKTQRWSKTDKSELV 724
W IR CLT+ + + + + C S QRW T++ ++
Sbjct: 173 RWA-----LYGDGSIRPKQLQSQCLTNG-RDSISTVINIVSCSAGSSGQRWVFTNEGAIL 226
Query: 725 LAEL-LCLDAGATKPKLTK-----CHEMGGSQEWNFV 755
+ L +D P L + +Q W V
Sbjct: 227 NLKNGLAMDVAQANPSLQRIIIYPAT-GNPNQMWLPV 262
|
| >2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A* Length = 249 | Back alignment and structure |
|---|
Score = 49.7 bits (118), Expect = 1e-06
Identities = 27/228 (11%), Positives = 53/228 (23%), Gaps = 23/228 (10%)
Query: 151 IILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMF--GAKYATGKVLV 208
LV D ++Y L E F + + G+ ++
Sbjct: 21 CSLVRDQAKYDRLLE-SFERFGFTPDKAEFLAADNREGNQFHGFSWHKQMLPRCKGRYVI 79
Query: 209 FLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKW 268
F +E+ + L+ I P + L LH
Sbjct: 80 FCHEDVELVDRGYDDLVAAIEALEE--ADPKWLVAGVAG--SPWRPLNHSVTAQALHISD 135
Query: 269 ENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIW 328
G + + ++ + R G + +L +
Sbjct: 136 ---VFGNDRRRGNVPCRVE--SLDECFLLMRRLKPVLNSYDMQG---FHYYGADLCLQAE 187
Query: 329 MCGGSLAMIPCSRIGHVFRSRRPYNNGHNEDPLTRNSLRVAHVWMDEY 376
GG I + H Y ++ R +A + +
Sbjct: 188 FLGGRAYAID-FHLHH-------YGRAIADENFHRLRQEMAQKYRRWF 227
|
| >3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* Length = 729 | Back alignment and structure |
|---|
Score = 48.4 bits (115), Expect = 1e-05
Identities = 36/385 (9%), Positives = 92/385 (23%), Gaps = 43/385 (11%)
Query: 144 IQSLLH------EIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMF 197
++S+ +I+VND S ++ +K + + + G AR
Sbjct: 21 LESIKQQRTQDFNLIIVNDGS--TDQSKKLMDEAIKDYDK-NIRFIDLDENSGHAHARNI 77
Query: 198 GAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVR 257
+ +FLD+ E+ ++ + + T+ + PI
Sbjct: 78 ALEEVETPYFMFLDADDELASYAIT-FYLEKFNNTDGLIAPIHSFTTQRP---------- 126
Query: 258 GGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSLG-QYDAGLEIW 316
F + + ++++ I L A + + +++ L
Sbjct: 127 -------QFVDLDRVRVEYFNAKENINSFLRKQSACNI-IFRTAIVRAHHIRFNENLNT- 177
Query: 317 GGENLELSFRIWMCGGSLAMIPCSRIGHVFRSRRPYNNGHNEDPLTRNSLRVAHVWMDEY 376
+ I + Y+ L+ + +
Sbjct: 178 -YVDWSFVLEYMKYVNKFVRIF---NFPFYFRGEVYDPFETL-TLSEQNFDILFKDYVNS 232
Query: 377 IEHFLKQRPEARNIDYGDVTDRKQLRARLGCKSFKWYLDNVYPEMILPSDDEERLKKKWA 436
+K+ + ++ ++ + + L +
Sbjct: 233 FYDAIKRATNPKVREFIVTKMGNKIANEFEPTRYDINERYQTHKDTLVELSKFLHVHLVK 292
Query: 437 QVEQPKFQPWYSRARNYTNSLRVAHVWMDEYIEHFLKQRPEARNIDYGDVTDRKQLRARL 496
+ N T+ + + K+ +
Sbjct: 293 NQKLINKIETILLMNNETDKAFKVNQFRKTLRHVKNIVLRRKNKERSLYDLTDKEDNVKP 352
Query: 497 GCKSF-----KWYLDN---VYPEMI 513
F K Y D+ +Y M
Sbjct: 353 KTIVFESFGGKNYSDSPKYIYEYMQ 377
|
| >3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* Length = 729 | Back alignment and structure |
|---|
Score = 47.3 bits (112), Expect = 2e-05
Identities = 14/90 (15%), Positives = 32/90 (35%), Gaps = 6/90 (6%)
Query: 52 PSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGL 111
++I+ +YN + ++++ + Q +I+VND S ++ +K
Sbjct: 2 NKLTIIVTYYN-AEEYITGCLESIKQQRTQDF--NLIIVNDGS--TDQSKKLMDEAIKD- 55
Query: 112 NDGRVHLYRTSKREGLIRARMFGAKYATGK 141
D + + G AR +
Sbjct: 56 YDKNIRFIDLDENSGHAHARNIALEEVETP 85
|
| >2vlc_A Cinnamomin, type 2 ribosome-inactivating protein cinnamomin III; ribosome inhibiting proteins, toxin, hydrolase, plant defense; HET: AS5 BMA XYP XYS; 2.95A {Cinnamomum camphora} Length = 570 | Back alignment and structure |
|---|
Score = 46.0 bits (108), Expect = 5e-05
Identities = 37/219 (16%), Positives = 73/219 (33%), Gaps = 26/219 (11%)
Query: 552 LSSTDLCLTSKVDKTKGSPLVLKKCDEL-SKTQHWSKTDKSELVLAEL-LCLDAG----A 605
+ S CLT+ + G +++ C + W ++ + L L A
Sbjct: 364 IRSNGKCLTT-NGYSAGDYVMIYDCRTPVTAASIWQFWANGTIINPQSALVLSAESGNPR 422
Query: 606 TKPKLTKCHEMGGSQEYWCWLRCKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQ 665
T + S++ W + ++ + ++ + Q
Sbjct: 423 TTLTVQADI--YASRQGWLAGNNTEPFVTSIVGFNDLCMQANGDAM--WVVECESSKAEQ 478
Query: 666 PWYSRARNYTSHFHIR-LSGTDLCLTSKVDKTKGSPLVLKKCDELSKTQRWSKTDKSELV 724
W IR D CLTS + ++GS +++ C S+ QRW + ++
Sbjct: 479 KWA-----LYPDGSIRPHQDRDRCLTSTDNHSQGSIIIISSCSPGSEGQRWVFMNDGTIL 533
Query: 725 LAEL-LCLDAGATKPKLTK-----CHEMGGS-QEWNFVL 756
+ L +D + P L + G Q+W +L
Sbjct: 534 NLKNGLVMDVKGSDPSLHQIIIWPAT--GKPNQKWLPLL 570
|
| >1abr_B Abrin-A; glycosidase/carbohydrate complex, lectin, lectin (agglutinin), glycoprotein, plant SEED protein, plant toxin; HET: NDG NGZ MAN BMA BGC; 2.14A {Abrus precatorius} SCOP: b.42.2.1 b.42.2.1 PDB: 2zr1_B* 2q3n_B* Length = 267 | Back alignment and structure |
|---|
Score = 44.0 bits (103), Expect = 1e-04
Identities = 20/123 (16%), Positives = 45/123 (36%), Gaps = 9/123 (7%)
Query: 680 IRLSGTD-LCLTSKVDKTK-GSPLVLKKC-DELSKTQRWSKTDKSELVLAELLCLDAGAT 736
+R+ G D +C+ + G+ +++ KC D L + Q W+ + CL
Sbjct: 16 VRIGGRDGMCVDVYDNGYHNGNRIIMWKCKDRLEENQLWTLKSDKTIRSNGK-CLTTYGY 74
Query: 737 KP----KLTKCHEMGGSQEWNFVLRDKTPIYSPATGTCLGSKNRLENTVIVMEMCAQHKD 792
P + C ++ + + D I +P + L +++ + ++
Sbjct: 75 APGSYVMIYDCTS-AVAEATYWEIWDNGTIINPKSALVLSAESSSMGGTLTVQTNEYLMR 133
Query: 793 TSW 795
W
Sbjct: 134 QGW 136
|
| >1dqg_A Mannose receptor; beta trefoil, multilectin receptor, pituitary hormones, sulfated carbohydrate, sugar binding protein; 1.70A {Mus musculus} SCOP: b.42.2.2 PDB: 1dqo_A* 1fwu_A* 1fwv_A* Length = 135 | Back alignment and structure |
|---|
Score = 42.0 bits (98), Expect = 1e-04
Identities = 17/123 (13%), Positives = 37/123 (30%), Gaps = 13/123 (10%)
Query: 678 FHIRLSGTDLCLTSKVDKTKGSPLVLKKCDELSKTQRWSKTDKSELV-LAELLCLDAGAT 736
F I C+ D + C+ +++Q++ S+++ +A LCL +
Sbjct: 6 FLIYNEDHKRCV----DALSAISVQTATCNPEAESQKFRWVSDSQIMSVAFKLCLGVPSK 61
Query: 737 KP----KLTKCHEMGGSQEWNFVLRDKTPIYSPATGTCLGSKNRLENTVIVMEMCAQHKD 792
L C Q+W ++ + + I + +
Sbjct: 62 TDWASVTLYACDSKSEYQKWEC---KNDTLFGIKGTELYFNYGNRQEKNIKLYKGSGLWS 118
Query: 793 TSW 795
W
Sbjct: 119 R-W 120
|
| >1knl_A Endo-1,4-beta-xylanase A; carbohydrate binding module, CBM13 xylan binding domain, LEC ricin B-like, beta-trefoil fold, hydrolase; 1.20A {Streptomyces lividans} SCOP: b.42.2.1 PDB: 1knm_A* 1mc9_A* Length = 130 | Back alignment and structure |
|---|
Score = 39.6 bits (93), Expect = 6e-04
Identities = 28/97 (28%), Positives = 40/97 (41%), Gaps = 9/97 (9%)
Query: 680 IRLSGTDLCLTSKVDKTK-GSPLVLKKCDELSKTQRWSKTDKSELVLAELLCLDAGATKP 738
I+ G+ CL T G+ L L C Q+W+ TD EL + CLDA T
Sbjct: 9 IKGVGSGRCLDVPDASTSDGTQLQLWDCHS-GTNQQWAATDAGELRVYGDKCLDAAGTSN 67
Query: 739 ----KLTKCHEMGGSQEWNFVLRDKTPIYSPATGTCL 771
++ C G +Q+W L + +G CL
Sbjct: 68 GSKVQIYSCWG-GDNQKW--RLNSDGSVVGVQSGLCL 101
|
| >1xez_A Hemolysin, cytolysin; pore-forming toxin, Pro-toxin, water- soluble monomer, beta-prism, beta-trefoil; HET: BOG; 2.30A {Vibrio cholerae} PDB: 3o44_A Length = 721 | Back alignment and structure |
|---|
Score = 42.2 bits (98), Expect = 7e-04
Identities = 28/157 (17%), Positives = 44/157 (28%), Gaps = 14/157 (8%)
Query: 472 LKQRPEARNIDYGDVTDRKQLRARLGCKSFKWYLDNVYPEMILPSDDEERLKKKWAQVEQ 531
K + +R +Y+ + D R K A
Sbjct: 394 YKASATETGSTDFIIDSSVNIRPIYNGAYKHYYVVGAHQSYHGFEDTPRRRITKSASFTV 453
Query: 532 PKFQPWYSRARNYTSHFHIRLSS-TDLCLTSKVDKTKGSPLVLKKCDELSKTQHWSKTDK 590
P ++ R +++L+S + C+ L CD Q +
Sbjct: 454 DWDHPVFTGGR----PVNLQLASFNNRCI----QVDAQGRLTANMCDSQQSAQSFIYDQL 505
Query: 591 SELV--LAELLCLDAGATKPKLTKCHEMGGSQEYWCW 625
V LCLD GA L C+ +Q W W
Sbjct: 506 GRYVSASNTKLCLD-GAALDALQPCN-QNLTQR-WEW 539
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 867 | |||
| 2ffu_A | 501 | Ppgalnact-2, polypeptide N-acetylgalactosaminyltra | 100.0 | |
| 2d7i_A | 570 | Polypeptide N-acetylgalactosaminyltransferase 10; | 100.0 | |
| 1xhb_A | 472 | Polypeptide N-acetylgalactosaminyltransferase 1; g | 100.0 | |
| 2d7i_A | 570 | Polypeptide N-acetylgalactosaminyltransferase 10; | 99.98 | |
| 1xhb_A | 472 | Polypeptide N-acetylgalactosaminyltransferase 1; g | 99.98 | |
| 3a21_A | 614 | Putative secreted alpha-galactosidase; beta-alpha- | 99.97 | |
| 1ggp_B | 254 | TKL-1, protein (lectin 1 B chain); sugar binding p | 99.97 | |
| 1m2t_B | 263 | Mistletoe lectin I B chain; ribosome inactivation, | 99.97 | |
| 2aai_B | 262 | Ricin (B chain); glycosidase; HET: GAL BGC NDG NAG | 99.96 | |
| 3c9z_A | 258 | Agglutinin II, SNA-II; beta-trefoil, ricin-B domai | 99.96 | |
| 3bcv_A | 240 | Putative glycosyltransferase protein; protein stru | 99.96 | |
| 1abr_B | 267 | Abrin-A; glycosidase/carbohydrate complex, lectin, | 99.96 | |
| 2z86_A | 625 | Chondroitin synthase; GT-A, glycosyltransferase A, | 99.96 | |
| 2vlc_A | 570 | Cinnamomin, type 2 ribosome-inactivating protein c | 99.95 | |
| 4fix_A | 657 | UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 | 99.95 | |
| 1qg8_A | 255 | Protein (spore coat polysaccharide biosynthesis P | 99.94 | |
| 1vcl_A | 432 | Hemolytic lectin CEL-III; hemolysis, hemagglutinat | 99.94 | |
| 2z86_A | 625 | Chondroitin synthase; GT-A, glycosyltransferase A, | 99.92 | |
| 2nxv_A | 249 | ATP synthase subunits region ORF 6; majastridin, A | 99.9 | |
| 3l7i_A | 729 | Teichoic acid biosynthesis protein F; GT-B fold, m | 99.9 | |
| 4hg6_A | 802 | Cellulose synthase subunit A; membrane translocati | 99.89 | |
| 2fy7_A | 287 | Beta-1,4-galactosyltransferase 1; M339H mutant, AP | 99.89 | |
| 2dry_A | 130 | 29-kDa galactose-binding lectin; earthworm lumbric | 99.87 | |
| 3ckj_A | 329 | Putative uncharacterized protein; mycobacteria, un | 99.87 | |
| 3aj6_A | 286 | Main hemagglutinin component; toxin, beta-trefoil; | 99.86 | |
| 2vse_A | 841 | MTX holotoxin, mosquitocidal toxin; ADP-ribosyltra | 99.85 | |
| 3c9z_A | 258 | Agglutinin II, SNA-II; beta-trefoil, ricin-B domai | 99.85 | |
| 1vcl_A | 432 | Hemolytic lectin CEL-III; hemolysis, hemagglutinat | 99.84 | |
| 2aai_B | 262 | Ricin (B chain); glycosidase; HET: GAL BGC NDG NAG | 99.84 | |
| 1abr_B | 267 | Abrin-A; glycosidase/carbohydrate complex, lectin, | 99.83 | |
| 3f1y_A | 387 | Mannosyl-3-phosphoglycerate synthase; GT-A type gl | 99.83 | |
| 1m2t_B | 263 | Mistletoe lectin I B chain; ribosome inactivation, | 99.83 | |
| 1ggp_B | 254 | TKL-1, protein (lectin 1 B chain); sugar binding p | 99.83 | |
| 1ybi_A | 288 | HA33A, HA33/A, non-toxin haemagglutinin HA34; beta | 99.82 | |
| 2vse_A | 841 | MTX holotoxin, mosquitocidal toxin; ADP-ribosyltra | 99.81 | |
| 1knl_A | 130 | Endo-1,4-beta-xylanase A; carbohydrate binding mod | 99.81 | |
| 2vlc_A | 570 | Cinnamomin, type 2 ribosome-inactivating protein c | 99.81 | |
| 2ao3_A | 130 | 29-kDa galactose-binding lectin; earthworm lumbric | 99.8 | |
| 2ffu_A | 501 | Ppgalnact-2, polypeptide N-acetylgalactosaminyltra | 99.79 | |
| 2dry_A | 130 | 29-kDa galactose-binding lectin; earthworm lumbric | 99.78 | |
| 3pg0_A | 165 | Threefoil; symmetric design, beta-trefoil, enginee | 99.77 | |
| 3phz_A | 286 | Ricin B-related lectin; beta trefoil, saccharide b | 99.75 | |
| 3a07_A | 118 | Actinohivin; carbohydrate-binding module family 13 | 99.75 | |
| 3a21_A | 614 | Putative secreted alpha-galactosidase; beta-alpha- | 99.75 | |
| 1knl_A | 130 | Endo-1,4-beta-xylanase A; carbohydrate binding mod | 99.74 | |
| 2d1z_A | 436 | Endo-1,4-beta-D-xylanase; TIM-barrel, retaining en | 99.71 | |
| 2ao3_A | 130 | 29-kDa galactose-binding lectin; earthworm lumbric | 99.7 | |
| 3ef2_A | 293 | Agglutinin, lectin; beta-trefoil, calcium-binding, | 99.69 | |
| 3nbc_A | 148 | Ricin B-like lectin; lactose, sugar BIND protein; | 99.67 | |
| 3vsf_A | 526 | Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactana | 99.66 | |
| 3a07_A | 118 | Actinohivin; carbohydrate-binding module family 13 | 99.65 | |
| 3pg0_A | 165 | Threefoil; symmetric design, beta-trefoil, enginee | 99.64 | |
| 3aj6_A | 286 | Main hemagglutinin component; toxin, beta-trefoil; | 99.63 | |
| 3phz_A | 286 | Ricin B-related lectin; beta trefoil, saccharide b | 99.62 | |
| 2d1z_A | 436 | Endo-1,4-beta-D-xylanase; TIM-barrel, retaining en | 99.62 | |
| 3ef2_A | 293 | Agglutinin, lectin; beta-trefoil, calcium-binding, | 99.55 | |
| 1ybi_A | 288 | HA33A, HA33/A, non-toxin haemagglutinin HA34; beta | 99.54 | |
| 2bo4_A | 397 | Mannosylglycerate synthase; catalysis, glycosyltra | 99.47 | |
| 3vsf_A | 526 | Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactana | 99.46 | |
| 2wvl_A | 391 | Mannosyl-3-phosphoglycerate synthase; GT-A fold, t | 99.42 | |
| 3nbc_A | 148 | Ricin B-like lectin; lactose, sugar BIND protein; | 99.3 | |
| 3lw6_A | 287 | FI08434P, beta-4-galactosyltransferase 7; protein- | 99.05 | |
| 1fo8_A | 343 | Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetyl | 99.0 | |
| 2zu9_A | 394 | Mannosyl-3-phosphoglycerate synthase; GT-A fold, g | 98.96 | |
| 2x2s_A | 153 | Agglutinin, agglutinin SSA; fungal lectin, beta-tr | 98.58 | |
| 1sr4_A | 206 | CDT A, cytolethal distending toxin subunit A; bact | 98.33 | |
| 2c0n_A | 203 | A197; thermophil protein, thermophilic virus, STIV | 97.66 | |
| 1dqg_A | 135 | Mannose receptor; beta trefoil, multilectin recept | 97.53 | |
| 1sr4_A | 206 | CDT A, cytolethal distending toxin subunit A; bact | 97.46 | |
| 1dqg_A | 135 | Mannose receptor; beta trefoil, multilectin recept | 97.44 | |
| 1xez_A | 721 | Hemolysin, cytolysin; pore-forming toxin, Pro-toxi | 97.38 | |
| 1xez_A | 721 | Hemolysin, cytolysin; pore-forming toxin, Pro-toxi | 97.33 | |
| 2x2s_A | 153 | Agglutinin, agglutinin SSA; fungal lectin, beta-tr | 96.79 | |
| 2wvl_A | 391 | Mannosyl-3-phosphoglycerate synthase; GT-A fold, t | 94.09 | |
| 1sr4_C | 166 | CDT C, cytolethal distending toxin protein C; bact | 92.78 | |
| 2f2f_C | 186 | CDT C, cytolethal distending toxin C; actinobacill | 92.41 | |
| 1omz_A | 293 | Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; ro | 91.5 | |
| 3k8d_A | 264 | 3-deoxy-manno-octulosonate cytidylyltransferase; K | 89.48 | |
| 3oam_A | 252 | 3-deoxy-manno-octulosonate cytidylyltransferase; c | 89.04 | |
| 3tqd_A | 256 | 3-deoxy-manno-octulosonate cytidylyltransferase; c | 88.03 | |
| 4fcu_A | 253 | 3-deoxy-manno-octulosonate cytidylyltransferase; s | 87.76 | |
| 4ecm_A | 269 | Glucose-1-phosphate thymidylyltransferase; HET: DA | 87.58 | |
| 2d0j_A | 246 | Galactosylgalactosylxylosylprotein 3-beta- glucuro | 84.32 | |
| 3juk_A | 281 | UDP-glucose pyrophosphorylase (GALU); transfer; HE | 81.74 | |
| 1hm9_A | 468 | GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltr | 81.57 | |
| 3cu0_A | 281 | Galactosylgalactosylxylosylprotein 3-beta- glucuro | 80.87 | |
| 4fce_A | 459 | Bifunctional protein GLMU; GLMU. csgid, niaid, str | 80.59 |
| >2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-83 Score=745.59 Aligned_cols=476 Identities=39% Similarity=0.749 Sum_probs=404.6
Q ss_pred CHhhhhhhhcCccccCcceeeecccCCCCCCCCCCccccccccCCCCCCcEEEEEEeCCCChHHHHHHHHHHHhcCcccc
Q psy1765 4 NEQDLITRDEGYRYYGFNALISNKLSLDRKIPDTRNSLCANQTFPSTLPSTSVIICFYNEHPATLYRSVQTLLSRTGQSL 83 (867)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~r~~~c~~~~~~~~~P~vSVIIp~yNe~~~~l~~~l~Svl~qt~~~~ 83 (867)
+++.++..++++++++||+++||+|+++|.+||+|++.|....|+..+|+||||||+||++.+.|.+||+||++|+++++
T Consensus 18 ~~~~~~~~~~~~~~~~~n~~~s~~i~~~r~~~d~r~~~~~~~~~~~~~p~vSVIIp~yN~~~~~L~~~l~Sl~~q~~~~~ 97 (501)
T 2ffu_A 18 GGTMVRSGQDPYARNKFNQVESDKLRMDRAIPDTRHDQCQRKQWRVDLPATSVVITFHNEARSALLRTVVSVLKKSPPHL 97 (501)
T ss_dssp HTTCCCTTSCTTTTTSSCHHHHHHSCTTCCCCCCSCGGGGGCCCCSSCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGG
T ss_pred ChhhhhhhhhhHHhcCcCHHHHcccCCCCcCCCCChhHhccccCCcCCCCEEEEEEeCcCcHHHHHHHHHHHHhhCchhh
Confidence 34567788999999999999999999999999999999999999999999999999999887799999999999999886
Q ss_pred ccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHHHhhhhhhhhccccccccceeEEEEEeCCCCCCcC
Q psy1765 84 LHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSN 163 (867)
Q Consensus 84 ~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~ 163 (867)
..|||||||+|+|++
T Consensus 98 ~~EIIvVDDgS~D~t----------------------------------------------------------------- 112 (501)
T 2ffu_A 98 IKEIILVDDYSNDPE----------------------------------------------------------------- 112 (501)
T ss_dssp EEEEEEEECSCSCTH-----------------------------------------------------------------
T ss_pred ceeEEEEECCCCchH-----------------------------------------------------------------
Confidence 569999999999982
Q ss_pred chHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhcCCCEEEEEcCCcccCccchHHHHHHHHhcCCceeeeEEeee
Q psy1765 164 LHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDII 243 (867)
Q Consensus 164 ~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A~Gd~llfLDaD~~v~p~wLe~Ll~~l~~~~~~vv~p~i~~i 243 (867)
+...++.. ++|++|+.++|.|+++|+|.|+++|+||||+|||+|++++|+||++|++.+.+++.++|+|.+..+
T Consensus 113 ----~~~~~~~~--~~v~vi~~~~n~G~~~A~N~G~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~vv~~~~~~~ 186 (501)
T 2ffu_A 113 ----DGALLGKI--EKVRVLRNDRREGLMRSRVRGADAAQAKVLTFLDSHCECNEHWLEPLLERVAEDRTRVVSPIIDVI 186 (501)
T ss_dssp ----HHHGGGGB--TTEEEEECSSCCHHHHHHHHHHHHCCSSEEEECCSSEEECTTCHHHHHHHHHHCTTEEEEEEEEEE
T ss_pred ----HHHHHhcC--CCEEEEECCCCcCHHHHHHHHHHhcCCCEEEEECCCcccCccHHHHHHHHHHhCCCeEEEeeeccC
Confidence 11222333 689999999999999999999999999999999999999999999999999999889999999999
Q ss_pred cCCCceeccc-cccccccccccccccccCCcCcCCCC-CCCCCcccccccccceEeEeHHHHHHhCCCCCCCCCCcccch
Q psy1765 244 NADTFQYTSS-ALVRGGFNWGLHFKWENLPKGTLNSS-EDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENL 321 (867)
Q Consensus 244 ~~~~~~~~~~-~~~~g~f~~~l~~~~~~~~~~~~~~~-~~~~~p~~~~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~ 321 (867)
+.+++.+... ....++|.|.+.+.|..++....... .....++.++.++|++++|+|++|+++|||||.|.+||+||+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~ 266 (501)
T 2ffu_A 187 NMDNFQYVGASADLKGGFDWNLVFKWDYMTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENL 266 (501)
T ss_dssp CTTTCCEECBCSSEEEEECTTCCEEEEECCHHHHHHTSSCTTSCEECSSCCSSSEEEEHHHHHHTTCCCTTCCSSSSHHH
T ss_pred cCCCceeecCCcccceEeeecCCCccccCCHHHHhhccCCCCCcccCccccceEEEEEHHHHHHhCCCCccccccCcchH
Confidence 8888877543 34567888988888766554322111 134456788899999999999999999999999999999999
Q ss_pred HHHHHHHHcCCeEEEEcccEEEEEeccCCCCCCCCCCchhhhhhHHHHHhcHHHHHHHHhhcCCCcCCCCCCCchhHHHH
Q psy1765 322 ELSFRIWMCGGSLAMIPCSRIGHVFRSRRPYNNGHNEDPLTRNSLRVAHVWMDEYIEHFLKQRPEARNIDYGDVTDRKQL 401 (867)
Q Consensus 322 Dls~Rl~~~G~~i~~~P~s~V~H~~r~~~~y~~~~~~~~~~rN~~R~a~~w~d~~~~~~y~~~p~~~~~~~gdi~~r~~l 401 (867)
||++|++++|+++.++|+++|+|.+|.++||..+...
T Consensus 267 dl~~Rl~~~G~~i~~~p~~~v~H~~r~~~~~~~~~~~------------------------------------------- 303 (501)
T 2ffu_A 267 EISFRVWQCGGSLEIIPCSRVGHVFRKQHPYTFPGGS------------------------------------------- 303 (501)
T ss_dssp HHHHHHHHTTCEEEEEEEEEEEECCCSSCCSCCTTCH-------------------------------------------
T ss_pred HHHHHHHhcCCeEEEccCcEEEEEccCcCCCcCCccc-------------------------------------------
Confidence 9999999999999999999999999998887653210
Q ss_pred HHHcCCcccccccccccCCCcCCCchHHHHhhhhccccCCCCCCCccccccccCceeEEEeecchhhhhhhccCcccCCC
Q psy1765 402 RARLGCKSFKWYLDNVYPEMILPSDDEERLKKKWAQVEQPKFQPWYSRARNYTNSLRVAHVWMDEYIEHFLKQRPEARNI 481 (867)
Q Consensus 402 r~~l~ck~F~Wyl~~v~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~s~~~~~~N~~R~aeVWmDeyk~~~y~~~p~~~~~ 481 (867)
.. ...+|.+|++|+|||+|+++||.++|.++.+
T Consensus 304 --------------------------~~---------------------~~~~n~~r~~~~w~d~~~~~~y~~~p~~~~~ 336 (501)
T 2ffu_A 304 --------------------------GT---------------------VFARNTRRAAEVWMDEYKNFYYAAVPSARNV 336 (501)
T ss_dssp --------------------------HH---------------------HHHHHHHHHHHHHCGGGHHHHHHHCGGGGGC
T ss_pred --------------------------hh---------------------HHHHHHHHHHHHHHHHHHHHHhhcCcccccC
Confidence 00 0013567889999999999999999999999
Q ss_pred CccCCchhHhhhhhccccccccccccccCccccCCCcHHHHhhhhhcccCCCcccccccccccccceeeeecCCCceecc
Q psy1765 482 DYGDVTDRKQLRARLGCKSFKWYLDNVYPEMILPSDDEERLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSSTDLCLTS 561 (867)
Q Consensus 482 ~~gdis~r~~LR~~l~CksF~Wyl~nv~p~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~rn~~~~g~ir~~~~~~CLD~ 561 (867)
++|||++|++||++|+||+|+|||+|||||+.+|.+.+ .+.|+|++ +++|||+
T Consensus 337 ~~g~~~~r~~lr~~l~c~~f~w~l~~v~p~~~~p~~~~-------------------------~~~g~i~~--~~~Cld~ 389 (501)
T 2ffu_A 337 PYGNIQSRLELRKKLSCKPFKWYLENVYPELRVPDHQD-------------------------IAFGALQQ--GTNCLDT 389 (501)
T ss_dssp CCCCCHHHHHHHHHTTCCCHHHHHHHTCTTSCCCCCCC-------------------------CCEEEEEE--TTEEEEC
T ss_pred CccchHHHHHHHHhcCCCCeEEehhccccccccccccc-------------------------cccccccc--cCccccc
Confidence 99999999999999999999999999999999986542 23467776 7899999
Q ss_pred cCCCCCCCcEEEEecCCCCCCceeeecCCCceEEeeceeeecC----CCccEEEeCCCCCCCcceeeeeeeccceeeecc
Q psy1765 562 KVDKTKGSPLVLKKCDELSKTQHWSKTDKSELVLAELLCLDAG----ATKPKLTKCHEMGGSQEYWCWLRCKSFKWYLDN 637 (867)
Q Consensus 562 ~~~~~~g~~v~l~~C~~~~~~Q~w~~t~~~~i~~~~~~CLd~~----g~~v~l~~C~~~~~~Q~~w~~~~~~~~~~~~~~ 637 (867)
.+ ...|++|++|+||++++||+|+++.+|+|+. +++|||+. |+.|+++.|++++++|+| .|.
T Consensus 390 ~~-~~~~~~v~l~~C~g~~~nQ~w~~~~~g~i~~-~~~Cld~~~~~~g~~v~l~~C~~~~~~Q~W-~~~----------- 455 (501)
T 2ffu_A 390 LG-HFADGVVGVYECHNAGGNQEWALTKEKSVKH-MDLCLTVVDRAPGSLIKLQGCRENDSRQKW-EQI----------- 455 (501)
T ss_dssp TT-CCTTCCCEEEECCSSCGGGCEEECTTSCEEE-TTEEEECSCCSTTCBCEEEECCTTCGGGCE-EEE-----------
T ss_pred cC-CCCCCEEEEEEcCCCCcceEEEEecCCceee-ccccceeccCCCCCeEEEEecCCCCcCceE-EEE-----------
Confidence 75 3467889999999998899999999999985 57999985 567999999998888874 432
Q ss_pred cCcccccCCChhhhhhhhhccccCCCCCcccccccccccceEEEecCCCceEeecCCCCCCCceEEecCCCCCCCccEEE
Q psy1765 638 VYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSGTDLCLTSKVDKTKGSPLVLKKCDELSKTQRWSK 717 (867)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~~~~~~~~~i~~~~sg~CLd~~~~~~~g~~v~l~~C~~~~~~Q~W~~ 717 (867)
. ..++|+|..||+|||+. ..+|+.+++++|++ +.+|+|.|
T Consensus 456 ---------------------------------~----~~~~i~~~~sg~CLd~~--~~~~~~~~~~~C~~-~~~Q~W~~ 495 (501)
T 2ffu_A 456 ---------------------------------E----GNSKLRHVGSNLCLDSR--TAKSGGLSVEVCGP-ALSQQWKF 495 (501)
T ss_dssp ---------------------------------T----TTTEEEETTSSEEEECT--TGGGTSCEEEECCS-CGGGCCEE
T ss_pred ---------------------------------C----CCCeEEeCCCCeEEeee--cCCCCeEEEEeCCC-CCcceEEE
Confidence 1 13689999999999984 33567899999987 88999999
Q ss_pred ccCC
Q psy1765 718 TDKS 721 (867)
Q Consensus 718 ~~~~ 721 (867)
+...
T Consensus 496 ~~~~ 499 (501)
T 2ffu_A 496 TLNL 499 (501)
T ss_dssp EEC-
T ss_pred eCCC
Confidence 7643
|
| >2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-80 Score=735.51 Aligned_cols=483 Identities=40% Similarity=0.728 Sum_probs=411.2
Q ss_pred CCCHhhhhhhhcCccccCcceeeecccCCCCCCCCCCccccccccCCCCCCcEEEEEEeCCCChHHHHHHHHHHHhcCcc
Q psy1765 2 VLNEQDLITRDEGYRYYGFNALISNKLSLDRKIPDTRNSLCANQTFPSTLPSTSVIICFYNEHPATLYRSVQTLLSRTGQ 81 (867)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~r~~~c~~~~~~~~~P~vSVIIp~yNe~~~~l~~~l~Svl~qt~~ 81 (867)
+++++++ .++.|++++||+++||+++++|.+|++|++.|....|+..+|+||||||+||++.+.|.+||+||++|+++
T Consensus 64 ~~~~~~~--~~~~~~~~~~n~~~sd~i~l~R~~~d~r~~~~~~~~~~~~~P~vSVIIp~yNe~~~~L~~~L~Sll~qt~~ 141 (570)
T 2d7i_A 64 PMTDAER--VDQAYRENGFNIYVSDKISLNRSLPDIRHPNCNSKRYLETLPNTSIIIPFHNEGWSSLLRTVHSVLNRSPP 141 (570)
T ss_dssp CCCTTTT--SSHHHHTTSSCHHHHHTSCTTCCCCCCSCGGGGTCCEESSCCCEEEEEEESSCCHHHHHHHHHHHHHHSCG
T ss_pred ECCHHHH--HHHHHHHcCCCHHHHhccCCCccCCCCCCccceecccCCCCCCeEEEEEECCCCHHHHHHHHHHHHhcCCc
Confidence 3454433 47889999999999999999999999999999999999999999999999998856999999999999998
Q ss_pred ccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHHHhhhhhhhhccccccccceeEEEEEeCCCCCC
Q psy1765 82 SLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRARMFGAKYATGKNRIQSLLHEIILVNDFSEYP 161 (867)
Q Consensus 82 ~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~ 161 (867)
++..|||||||+|+|+
T Consensus 142 ~~~~EIIVVDDgS~D~---------------------------------------------------------------- 157 (570)
T 2d7i_A 142 ELVAEIVLVDDFSDRE---------------------------------------------------------------- 157 (570)
T ss_dssp GGEEEEEEEECSCCCG----------------------------------------------------------------
T ss_pred cCcEEEEEEECCCCcH----------------------------------------------------------------
Confidence 8666999999999988
Q ss_pred cCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhcCCCEEEEEcCCcccCccchHHHHHHHHhcCCceeeeEEe
Q psy1765 162 SNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIID 241 (867)
Q Consensus 162 ~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A~Gd~llfLDaD~~v~p~wLe~Ll~~l~~~~~~vv~p~i~ 241 (867)
.+.+.++++.+.. ++|++|++++|.|+++|+|.|+++|+||||+|||+|+++.|+||++|++.+.+++..+|+|.+.
T Consensus 158 -tl~~~l~~~~~~~--~~v~vi~~~~n~G~~~A~N~G~~~A~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~~vv~~~i~ 234 (570)
T 2d7i_A 158 -HLKKPLEDYMALF--PSVRILRTKKREGLIRTRMLGASVATGDVITFLDSHCEANVNWLPPLLDRIARNRKTIVCPMID 234 (570)
T ss_dssp -GGTHHHHHHHTTS--TTEEEEECSSCCCHHHHHHHHHHHCCSSEEEECCSSEEECTTCSHHHHHHHHHCTTEEEEEEEE
T ss_pred -HHHHHHHHHHHhC--CeEEEEECCCCCCHHHHHHHHHHhcCCCEEEEEcCCccccccHHHHHHHHHHhCCCEEEeeeee
Confidence 2245667777665 7999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCceecc--ccccccccccccccccccCCcCcCCCCCCCCCcccccccccceEeEeHHHHHHhCCCCCCCCCCccc
Q psy1765 242 IINADTFQYTS--SALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGE 319 (867)
Q Consensus 242 ~i~~~~~~~~~--~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~airR~~f~~vGgfDe~~~~~G~E 319 (867)
.++.+++.+.. .....+.|.|.+.+.+....... .......++.++.++|++++|+|++|+++|||||.|.+||+|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfDe~~~~~g~E 312 (570)
T 2d7i_A 235 VIDHDDFRYETQAGDAMRGAFDWEMYYKRIPIPPEL--QKADPSDPFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGE 312 (570)
T ss_dssp EECTTTCCEECCTTSSCEEEECTTCCEEEECCCTTT--CCSSTTSCEECSSCCSSSEEEEHHHHHHTTSSCTTCCSSSSH
T ss_pred ccCCCchhhccccCCcccccccccccccccccchhh--hccCCCcceecccccceEEEEEHHHHHhcCCCCCcccccCcc
Confidence 99888887765 23456778888777665443321 112234567888999999999999999999999999999999
Q ss_pred chHHHHHHHHcCCeEEEEcccEEEEEeccCCCCCCCCCCchhhhhhHHHHHhcHHHHHHHHhhcCCCcCCCCCCCchhHH
Q psy1765 320 NLELSFRIWMCGGSLAMIPCSRIGHVFRSRRPYNNGHNEDPLTRNSLRVAHVWMDEYIEHFLKQRPEARNIDYGDVTDRK 399 (867)
Q Consensus 320 D~Dls~Rl~~~G~~i~~~P~s~V~H~~r~~~~y~~~~~~~~~~rN~~R~a~~w~d~~~~~~y~~~p~~~~~~~gdi~~r~ 399 (867)
|+||++|++++|++++++|+++|+|++|.+.||..+.. ..+.+|..|++++||++|+.+||.++|.++.+++||+++|+
T Consensus 313 D~dl~~Rl~~~G~~i~~~p~~~v~H~~r~~~~~~~~~~-~~~~~n~~r~~~~W~d~~~~~~y~~~p~~~~~~~g~~~~r~ 391 (570)
T 2d7i_A 313 QYEISFKVWMCGGRMEDIPCSRVGHIYRKYVPYKVPAG-VSLARNLKRVAEVWMDEYAEYIYQRRPEYRHLSAGDVAVQK 391 (570)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEEEEECCCSSCCSCCCSS-CCHHHHHHHHHHHHCGGGHHHHHTTCGGGTTSCCCCCHHHH
T ss_pred hHHHHHHHHhCCCeEEEccCeEEEEEccccCCCCCCch-hhhHHHHHHHHHHHHHHHHHHHHhcCcccccCCccchHHHH
Confidence 99999999999999999999999999999999988765 67889999999999999999999999999999999999999
Q ss_pred HHHHHcCCcccccccccccCCCcCCCchHHHHhhhhccccCCCCCCCccccccccCceeEEEeecchhhhhhhccCcccC
Q psy1765 400 QLRARLGCKSFKWYLDNVYPEMILPSDDEERLKKKWAQVEQPKFQPWYSRARNYTNSLRVAHVWMDEYIEHFLKQRPEAR 479 (867)
Q Consensus 400 ~lr~~l~ck~F~Wyl~~v~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~s~~~~~~N~~R~aeVWmDeyk~~~y~~~p~~~ 479 (867)
+||++|+||+|+|||+||||||.. .
T Consensus 392 ~lr~~l~ck~f~wyl~~v~~~~~~----------~--------------------------------------------- 416 (570)
T 2d7i_A 392 KLRSSLNCKSFKWFMTKIAWDLPK----------F--------------------------------------------- 416 (570)
T ss_dssp HHHHHHTCCCHHHHHHHTSTTHHH----------H---------------------------------------------
T ss_pred HHHHHcCCCCcHHHHHHhhhhccc----------c---------------------------------------------
Confidence 999999999999999999998652 0
Q ss_pred CCCccCCchhHhhhhhccccccccccccccCccccCCCcHHHHhhhhhcccCCCcccccccccccccceeeeecCCCcee
Q psy1765 480 NIDYGDVTDRKQLRARLGCKSFKWYLDNVYPEMILPSDDEERLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSSTDLCL 559 (867)
Q Consensus 480 ~~~~gdis~r~~LR~~l~CksF~Wyl~nv~p~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~rn~~~~g~ir~~~~~~CL 559 (867)
||.+..| ..+.|+|++.++++||
T Consensus 417 -----------------------------~p~~~~~----------------------------~~~~G~irn~~s~~CL 439 (570)
T 2d7i_A 417 -----------------------------YPPVEPP----------------------------AAAWGEIRNVGTGLCA 439 (570)
T ss_dssp -----------------------------SCSSCCC----------------------------CSEEEEEEETTTCCEE
T ss_pred -----------------------------cCccccc----------------------------ccccceeeecccCccc
Confidence 1100000 1134677888899999
Q ss_pred cccCCCCCCCcEEEEecCCC------CCCceeeecCCCceEE-----eeceeeecC--CCccEEEeCCCCCCCcceeeee
Q psy1765 560 TSKVDKTKGSPLVLKKCDEL------SKTQHWSKTDKSELVL-----AELLCLDAG--ATKPKLTKCHEMGGSQEYWCWL 626 (867)
Q Consensus 560 D~~~~~~~g~~v~l~~C~~~------~~~Q~w~~t~~~~i~~-----~~~~CLd~~--g~~v~l~~C~~~~~~Q~~w~~~ 626 (867)
|+.+. ..|++|++|+||+. +++|+|+++.+++|+. .+++|||+. |+.|+++.||++++||.| .|
T Consensus 440 D~~~~-~~g~~v~l~~C~g~~~~~~~~~nQ~w~~t~~g~ir~~~~~~~~~~CLd~~~~g~~v~l~~C~~~~~nQ~W-~~- 516 (570)
T 2d7i_A 440 DTKHG-ALGSPLRLEGCVRGRGEAAWNNMQVFTFTWREDIRPGDPQHTKKFCFDAISHTSPVTLYDCHSMKGNQLW-KY- 516 (570)
T ss_dssp CCCSC-TTTCCCCEECCCTTCSCGGGCCCCCEEECTTSCEEESCTTSCCSBCCBCCSSSSBCBCCBCCSSSSTTCC-EE-
T ss_pred cccCC-CCCCeEEEEECCCCCcCCCCCCCceEEEecCCceeecccccCCCcceeecCCCCeEEEEeCCCCCcCCeE-EE-
Confidence 99863 57999999999983 6799999999999996 578999995 577999999998888875 32
Q ss_pred eeccceeeecccCcccccCCChhhhhhhhhccccCCCCCcccccccccccceEEEecCCCceEeecCCCCCCCceEEecC
Q psy1765 627 RCKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSGTDLCLTSKVDKTKGSPLVLKKC 706 (867)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~~~~~~~~~i~~~~sg~CLd~~~~~~~g~~v~l~~C 706 (867)
..+++|+|..||+|||+... |+.|++++|
T Consensus 517 ------------------------------------------------~~~g~i~~~~sg~CLd~~~~---~~~v~l~~C 545 (570)
T 2d7i_A 517 ------------------------------------------------RKDKTLYHPVSGSCMDCSES---DHRIFMNTC 545 (570)
T ss_dssp ------------------------------------------------CTTSCEEBTTTTBEEEECTT---TCCEEEECC
T ss_pred ------------------------------------------------CCCCcEEeCCCCeeEeeeCC---CCeEEEEeC
Confidence 12468999999999998432 578999999
Q ss_pred CCCCCCccEEEccCCc
Q psy1765 707 DELSKTQRWSKTDKSE 722 (867)
Q Consensus 707 ~~~~~~Q~W~~~~~~~ 722 (867)
++++++|+|.|+..+.
T Consensus 546 ~~~~~~Q~W~~~~~~~ 561 (570)
T 2d7i_A 546 NPSSLTQQWLFEHTNS 561 (570)
T ss_dssp CTTCSTTCEEEEECCH
T ss_pred CCcCCCCEEEEecCCH
Confidence 9757799999986543
|
| >1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-79 Score=708.42 Aligned_cols=461 Identities=39% Similarity=0.774 Sum_probs=372.8
Q ss_pred eecccCCCCCCCCCCccccccccCCCCCCcEEEEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhh
Q psy1765 24 ISNKLSLDRKIPDTRNSLCANQTFPSTLPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGE 103 (867)
Q Consensus 24 ~~~~~~~~r~~~~~r~~~c~~~~~~~~~P~vSVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~ 103 (867)
+||+|+++|++||+|++.|+...|+..+|+||||||+||++.+.|.+||+||++|++++...|||||||+|+|+
T Consensus 1 ~s~~~~~~r~~~d~r~~~c~~~~~~~~~p~vSVIIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~------ 74 (472)
T 1xhb_A 1 ASEMIALNRSLPDVRLEGCKTKVYPDNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERD------ 74 (472)
T ss_dssp -------CCCCCCCSCGGGGTCCCCSCCCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCG------
T ss_pred CCccccCCCCCCCCCChhhccCcCCcCCCCeEEEEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcH------
Confidence 69999999999999999999999999999999999999988459999999999999988656999999999986
Q ss_pred HHHHHhhcCCCceEEEEeccchhhHHHhhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCC-CEEE
Q psy1765 104 VETFVKGLNDGRVHLYRTSKREGLIRARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNG-RVHL 182 (867)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~gi~~a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~-~vri 182 (867)
.+.+.++++.+.. + +|++
T Consensus 75 -----------------------------------------------------------~t~~~l~~~~~~~--~~~v~v 93 (472)
T 1xhb_A 75 -----------------------------------------------------------FLKRPLESYVKKL--KVPVHV 93 (472)
T ss_dssp -----------------------------------------------------------GGTHHHHHHHHSS--SSCEEE
T ss_pred -----------------------------------------------------------HHHHHHHHHHHHC--CCcEEE
Confidence 2356677777766 5 8999
Q ss_pred EEcCCCcCchhHHhHhhhhcCCCEEEEEcCCcccCccchHHHHHHHHhcCCceeeeEEeeecCCCceeccc-cccccccc
Q psy1765 183 YRTSKREGLIRARMFGAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSS-ALVRGGFN 261 (867)
Q Consensus 183 i~~~~n~G~a~ArN~G~~~A~Gd~llfLDaD~~v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~~~~~~~~-~~~~g~f~ 261 (867)
|++++|.|+++|+|.|+++|+||||+|||+|++++|+||+++++.+.+++..+++|.+..++.+++.+... ....++|.
T Consensus 94 i~~~~n~G~~~a~N~g~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (472)
T 1xhb_A 94 IRMEQRSGLIRARLKGAAVSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFN 173 (472)
T ss_dssp EECSSCCCHHHHHHHHHHHCCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEEC
T ss_pred EECCCCCChHHHHHHHHHhccCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEEEeeeeeEcCCCceeccCCCcccceee
Confidence 99999999999999999999999999999999999999999999999999889999998888888877533 34567888
Q ss_pred cccccccccCCcCcCC-CCCCCCCcccccccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEccc
Q psy1765 262 WGLHFKWENLPKGTLN-SSEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCS 340 (867)
Q Consensus 262 ~~l~~~~~~~~~~~~~-~~~~~~~p~~~~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s 340 (867)
|.+.+.|..++..... .......++.++.++|++|+|+|++|+++|||||.|++||+||+||++|++++|+++.++|++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~R~~~~G~~i~~~p~~ 253 (472)
T 1xhb_A 174 WKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCS 253 (472)
T ss_dssp TTCCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHTTSCCTTSCTTCCCCSHHHHHHHHTTCEEEEEEEE
T ss_pred ccceeecccCCHHHHhcccCCCCCcccCccccceeEEEEHHHHHHcCCCCCcccccCchhHHHHHHHHhcCCeEEEccCc
Confidence 9888887665543221 122334467889999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeccCCCCCCCCC-CchhhhhhHHHHHhcHHHHHHHHhhcCCCcCCCCCCCchhHHHHHHHcCCcccccccccccC
Q psy1765 341 RIGHVFRSRRPYNNGHN-EDPLTRNSLRVAHVWMDEYIEHFLKQRPEARNIDYGDVTDRKQLRARLGCKSFKWYLDNVYP 419 (867)
Q Consensus 341 ~V~H~~r~~~~y~~~~~-~~~~~rN~~R~a~~w~d~~~~~~y~~~p~~~~~~~gdi~~r~~lr~~l~ck~F~Wyl~~v~p 419 (867)
+|+|+++.++|+..+.. ...+.+|..|++++|||+|+++||.++|.+..+++|++++|+.||++|+||+|+|||++|||
T Consensus 254 ~v~H~~~~~~~~~~~~~~~~~~~~n~~r~~~~W~d~~~~~~~~~~p~~~~~~~g~~~~~~~lr~~l~~~~f~w~l~~v~p 333 (472)
T 1xhb_A 254 HVGHVFRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFYIISPGVTKVDYGDISSRLGLRRKLQCKPFSWYLENIYP 333 (472)
T ss_dssp EEEEEC------------CHHHHHHHHHHHHHHCGGGGHHHHHTSTTGGGSCCCCCHHHHHHHHHTTCCCHHHHHHHTCT
T ss_pred EEEEEccCcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhCcccccCCCCCHHHHHHHHHhcCCCCccchhhhhhh
Confidence 99999999999887655 45788999999999999999999998887766666776666666666666666666666666
Q ss_pred CCcCCCchHHHHhhhhccccCCCCCCCccccccccCceeEEEeecchhhhhhhccCcccCCCCccCCchhHhhhhhcccc
Q psy1765 420 EMILPSDDEERLKKKWAQVEQPKFQPWYSRARNYTNSLRVAHVWMDEYIEHFLKQRPEARNIDYGDVTDRKQLRARLGCK 499 (867)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~s~~~~~~N~~R~aeVWmDeyk~~~y~~~p~~~~~~~gdis~r~~LR~~l~Ck 499 (867)
|+.+|.
T Consensus 334 ~~~~p~-------------------------------------------------------------------------- 339 (472)
T 1xhb_A 334 DSQIPR-------------------------------------------------------------------------- 339 (472)
T ss_dssp TCSSCS--------------------------------------------------------------------------
T ss_pred hhcccc--------------------------------------------------------------------------
Confidence 655542
Q ss_pred ccccccccccCccccCCCcHHHHhhhhhcccCCCcccccccccccccceeeeecCCCceecccCCCCCCCcEEEEecCCC
Q psy1765 500 SFKWYLDNVYPEMILPSDDEERLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSSTDLCLTSKVDKTKGSPLVLKKCDEL 579 (867)
Q Consensus 500 sF~Wyl~nv~p~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~rn~~~~g~ir~~~~~~CLD~~~~~~~g~~v~l~~C~~~ 579 (867)
.. .+.|+|++.++++|||+.+ ...|++|++|+||+.
T Consensus 340 -----------------~~--------------------------~~~g~i~~~~~~~Cld~~~-~~~g~~v~l~~C~~~ 375 (472)
T 1xhb_A 340 -----------------HY--------------------------FSLGEIRNVETNQCLDNMA-RKENEKVGIFNCHGM 375 (472)
T ss_dssp -----------------SE--------------------------EEEECEEETTTCEEEECTT-CCTTEECEEEECCSC
T ss_pred -----------------cc--------------------------cccceEEECCCCccccccC-CCCCCeEEEEeCCCC
Confidence 21 1235677788999999987 357899999999998
Q ss_pred CCCceeeecCCCceEEeeceeeecC--CCccEEEeCCCCCCCcceeeeeeeccceeeecccCcccccCCChhhhhhhhhc
Q psy1765 580 SKTQHWSKTDKSELVLAELLCLDAG--ATKPKLTKCHEMGGSQEYWCWLRCKSFKWYLDNVYPEMILPSDDEDRLKKKWA 657 (867)
Q Consensus 580 ~~~Q~w~~t~~~~i~~~~~~CLd~~--g~~v~l~~C~~~~~~Q~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (867)
++||+|+++.+|+|+.. ++|||+. |+.++++.|++++++|+| .|.
T Consensus 376 ~~nQ~w~~~~~g~i~~~-~~Cld~~~~g~~v~l~~C~~~~~~Q~W-~~~------------------------------- 422 (472)
T 1xhb_A 376 GGNQVFSYTANKEIRTD-DLCLDVSKLNGPVTMLKCHHLKGNQLW-EYD------------------------------- 422 (472)
T ss_dssp CGGGCEEEETTSCEEET-TEEEECCSTTCCCEEEECCTTCGGGCE-EEE-------------------------------
T ss_pred CcceeEEEcccceeeec-ceEEeecCCCceEEEEeCCCCCcCceE-EEe-------------------------------
Confidence 88999999999999864 5999987 678999999997778874 331
Q ss_pred cccCCCCCcccccccccccceEEEecCCCceEeecCCCCCCCceEEecCCCCCCCccEEEccCC
Q psy1765 658 QVEQPKFQPWYSRARNYTSHFHIRLSGTDLCLTSKVDKTKGSPLVLKKCDELSKTQRWSKTDKS 721 (867)
Q Consensus 658 ~~~~~~~q~W~~~~~~~~~~~~i~~~~sg~CLd~~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~~ 721 (867)
. .+++|+|..+|+|||+. ++.+|+.+++++|++ +++|+|.+....
T Consensus 423 -------------~----~~g~i~~~~sg~CLd~~-~~~~~~~~~~~~C~~-~~~Q~W~~~~~~ 467 (472)
T 1xhb_A 423 -------------P----VKLTLQHVNSNQCLDKA-TEEDSQVPSIRDCTG-SRSQQWLLRNVT 467 (472)
T ss_dssp -------------T----TTTEEEESSSCEEEESC-CSSSTTSCEEEECCC-CGGGCEEECCC-
T ss_pred -------------C----CCCeEEeCCCCeeEccc-cCCCCCeEEEEeCCC-CCcceEEEeCCc
Confidence 1 13689999999999985 345688999999997 889999998644
|
| >2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=2.6e-33 Score=331.77 Aligned_cols=192 Identities=32% Similarity=0.597 Sum_probs=162.1
Q ss_pred cccCceeEEEeecchhhhhhhccCcccCCCCccCCchhHhhhhhccccccccccccccCccc--cCCCcHHHHhhhhhcc
Q psy1765 452 NYTNSLRVAHVWMDEYIEHFLKQRPEARNIDYGDVTDRKQLRARLGCKSFKWYLDNVYPEMI--LPSDDEERLKKKWAQV 529 (867)
Q Consensus 452 ~~~N~~R~aeVWmDeyk~~~y~~~p~~~~~~~gdis~r~~LR~~l~CksF~Wyl~nv~p~~~--~p~~~~~~~~~~~~~~ 529 (867)
..+|.+|+||+|||+||++||.++|.++.+++||+++|++||++|+||+|+|||+|||||+. +|..
T Consensus 353 ~~~n~~r~~~~W~d~~~~~~y~~~p~~~~~~~g~~~~r~~lr~~l~ck~f~wyl~~v~~~~~~~~p~~------------ 420 (570)
T 2d7i_A 353 LARNLKRVAEVWMDEYAEYIYQRRPEYRHLSAGDVAVQKKLRSSLNCKSFKWFMTKIAWDLPKFYPPV------------ 420 (570)
T ss_dssp HHHHHHHHHHHHCGGGHHHHHTTCGGGTTSCCCCCHHHHHHHHHHTCCCHHHHHHHTSTTHHHHSCSS------------
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcCcccccCCccchHHHHHHHHHcCCCCcHHHHHHhhhhcccccCcc------------
Confidence 46799999999999999999999999999999999999999999999999999999999975 2210
Q ss_pred cCCCcccccccccccccceeeeecCCCceecccCCCCCCCcEEEEecCCCCCCceeeecCCCceEEeeceeeecCCCccE
Q psy1765 530 EQPKFQPWYSRARNYTSHFHIRLSSTDLCLTSKVDKTKGSPLVLKKCDELSKTQHWSKTDKSELVLAELLCLDAGATKPK 609 (867)
Q Consensus 530 ~~~~~~~~~g~~rn~~~~g~ir~~~~~~CLD~~~~~~~g~~v~l~~C~~~~~~Q~w~~t~~~~i~~~~~~CLd~~g~~v~ 609 (867)
+..
T Consensus 421 ------------------------------~~~----------------------------------------------- 423 (570)
T 2d7i_A 421 ------------------------------EPP----------------------------------------------- 423 (570)
T ss_dssp ------------------------------CCC-----------------------------------------------
T ss_pred ------------------------------ccc-----------------------------------------------
Confidence 000
Q ss_pred EEeCCCCCCCcceeeeeeeccceeeecccCcccccCCChhhhhhhhhccccCCCCCcccccccccccceEEEecCCCceE
Q psy1765 610 LTKCHEMGGSQEYWCWLRCKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSGTDLCL 689 (867)
Q Consensus 610 l~~C~~~~~~Q~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~~~~~~~~~i~~~~sg~CL 689 (867)
....|.|++..+++||
T Consensus 424 ----------------------------------------------------------------~~~~G~irn~~s~~CL 439 (570)
T 2d7i_A 424 ----------------------------------------------------------------AAAWGEIRNVGTGLCA 439 (570)
T ss_dssp ----------------------------------------------------------------CSEEEEEEETTTCCEE
T ss_pred ----------------------------------------------------------------ccccceeeecccCccc
Confidence 0012788998999999
Q ss_pred eecCCCCCCCceEEecCCCC------CCCccEEEccCCcEEe-----ccCceeeeC--CCCcEEEecCCCCCCCeEEEec
Q psy1765 690 TSKVDKTKGSPLVLKKCDEL------SKTQRWSKTDKSELVL-----AELLCLDAG--ATKPKLTKCHEMGGSQEWNFVL 756 (867)
Q Consensus 690 d~~~~~~~g~~v~l~~C~~~------~~~Q~W~~~~~~~~~~-----~s~~CLD~~--g~~v~~~~C~~~~~~Q~W~~~~ 756 (867)
|+.+ ..+|++|.+++|++. +.+|+|+++..++++. .+++|||+. |+.|++|+|++.+.+|+|.+..
T Consensus 440 D~~~-~~~g~~v~l~~C~g~~~~~~~~~nQ~w~~t~~g~ir~~~~~~~~~~CLd~~~~g~~v~l~~C~~~~~nQ~W~~~~ 518 (570)
T 2d7i_A 440 DTKH-GALGSPLRLEGCVRGRGEAAWNNMQVFTFTWREDIRPGDPQHTKKFCFDAISHTSPVTLYDCHSMKGNQLWKYRK 518 (570)
T ss_dssp CCCS-CTTTCCCCEECCCTTCSCGGGCCCCCEEECTTSCEEESCTTSCCSBCCBCCSSSSBCBCCBCCSSSSTTCCEECT
T ss_pred cccC-CCCCCeEEEEECCCCCcCCCCCCCceEEEecCCceeecccccCCCcceeecCCCCeEEEEeCCCCCcCCeEEECC
Confidence 9843 346889999999984 6789999999999986 578999994 7899999999866799999996
Q ss_pred CCeeeeecCCCCceeecCCCCCCCeEEEEecCCC-CCceEEEecCC
Q psy1765 757 RDKTPIYSPATGTCLGSKNRLENTVIVMEMCAQH-KDTSWDLVPVG 801 (867)
Q Consensus 757 ~~~~~i~n~~sg~CLd~~~~~~g~~v~~~~C~~~-~~Q~W~~~~~~ 801 (867)
++. |+|+.||+|||+.+. |+.|++++|+++ ++|+|+|..+.
T Consensus 519 ~g~--i~~~~sg~CLd~~~~--~~~v~l~~C~~~~~~Q~W~~~~~~ 560 (570)
T 2d7i_A 519 DKT--LYHPVSGSCMDCSES--DHRIFMNTCNPSSLTQQWLFEHTN 560 (570)
T ss_dssp TSC--EEBTTTTBEEEECTT--TCCEEEECCCTTCSTTCEEEEECC
T ss_pred CCc--EEeCCCCeeEeeeCC--CCeEEEEeCCCcCCCCEEEEecCC
Confidence 554 899999999999764 568999999955 48999998654
|
| >1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 | Back alignment and structure |
|---|
Probab=99.98 E-value=3.4e-33 Score=323.79 Aligned_cols=191 Identities=29% Similarity=0.560 Sum_probs=163.1
Q ss_pred cccCceeEEEeecchhhhhhhccCcccCCCCccCCchhHhhhhhccccccccccccccCccccCCCcHHHHhhhhhcccC
Q psy1765 452 NYTNSLRVAHVWMDEYIEHFLKQRPEARNIDYGDVTDRKQLRARLGCKSFKWYLDNVYPEMILPSDDEERLKKKWAQVEQ 531 (867)
Q Consensus 452 ~~~N~~R~aeVWmDeyk~~~y~~~p~~~~~~~gdis~r~~LR~~l~CksF~Wyl~nv~p~~~~p~~~~~~~~~~~~~~~~ 531 (867)
..+|.+|+||+|||+||++||.++|.++.+++|||++|++||++|+||+|+|||+|||||+. +
T Consensus 275 ~~~n~~r~~~~W~d~~~~~~~~~~p~~~~~~~g~~~~~~~lr~~l~~~~f~w~l~~v~p~~~---------------~-- 337 (472)
T 1xhb_A 275 INKNNRRLAEVWMDEFKNFFYIISPGVTKVDYGDISSRLGLRRKLQCKPFSWYLENIYPDSQ---------------I-- 337 (472)
T ss_dssp HHHHHHHHHHHHCGGGGHHHHHTSTTGGGSCCCCCHHHHHHHHHTTCCCHHHHHHHTCTTCS---------------S--
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCcccccCCCCCHHHHHHHHHhcCCCCccchhhhhhhhhc---------------c--
Confidence 46799999999999999999999999999999999999999999999999999999999844 0
Q ss_pred CCcccccccccccccceeeeecCCCceecccCCCCCCCcEEEEecCCCCCCceeeecCCCceEEeeceeeecCCCccEEE
Q psy1765 532 PKFQPWYSRARNYTSHFHIRLSSTDLCLTSKVDKTKGSPLVLKKCDELSKTQHWSKTDKSELVLAELLCLDAGATKPKLT 611 (867)
Q Consensus 532 ~~~~~~~g~~rn~~~~g~ir~~~~~~CLD~~~~~~~g~~v~l~~C~~~~~~Q~w~~t~~~~i~~~~~~CLd~~g~~v~l~ 611 (867)
+. .
T Consensus 338 ------------------------------p~-----~------------------------------------------ 340 (472)
T 1xhb_A 338 ------------------------------PR-----H------------------------------------------ 340 (472)
T ss_dssp ------------------------------CS-----S------------------------------------------
T ss_pred ------------------------------cc-----c------------------------------------------
Confidence 00 0
Q ss_pred eCCCCCCCcceeeeeeeccceeeecccCcccccCCChhhhhhhhhccccCCCCCcccccccccccceEEEecCCCceEee
Q psy1765 612 KCHEMGGSQEYWCWLRCKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSGTDLCLTS 691 (867)
Q Consensus 612 ~C~~~~~~Q~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~~~~~~~~~i~~~~sg~CLd~ 691 (867)
. ...|.|++..+++|||+
T Consensus 341 -------~-------------------------------------------------------~~~g~i~~~~~~~Cld~ 358 (472)
T 1xhb_A 341 -------Y-------------------------------------------------------FSLGEIRNVETNQCLDN 358 (472)
T ss_dssp -------E-------------------------------------------------------EEEECEEETTTCEEEEC
T ss_pred -------c-------------------------------------------------------cccceEEECCCCccccc
Confidence 0 00267888899999998
Q ss_pred cCCCCCCCceEEecCCCCCCCccEEEccCCcEEeccCceeeeC--CCCcEEEecCCCCCCCeEEEecCCeeeeecCCCCc
Q psy1765 692 KVDKTKGSPLVLKKCDELSKTQRWSKTDKSELVLAELLCLDAG--ATKPKLTKCHEMGGSQEWNFVLRDKTPIYSPATGT 769 (867)
Q Consensus 692 ~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~~~~~~~s~~CLD~~--g~~v~~~~C~~~~~~Q~W~~~~~~~~~i~n~~sg~ 769 (867)
.+ ..+|+.+.+++|++.+.+|+|.++..++++.. ++|||+. |+.|++|+|++.+.+|+|.+...++. |+|+.||+
T Consensus 359 ~~-~~~g~~v~l~~C~~~~~nQ~w~~~~~g~i~~~-~~Cld~~~~g~~v~l~~C~~~~~~Q~W~~~~~~g~-i~~~~sg~ 435 (472)
T 1xhb_A 359 MA-RKENEKVGIFNCHGMGGNQVFSYTANKEIRTD-DLCLDVSKLNGPVTMLKCHHLKGNQLWEYDPVKLT-LQHVNSNQ 435 (472)
T ss_dssp TT-CCTTEECEEEECCSCCGGGCEEEETTSCEEET-TEEEECCSTTCCCEEEECCTTCGGGCEEEETTTTE-EEESSSCE
T ss_pred cC-CCCCCeEEEEeCCCCCcceeEEEcccceeeec-ceEEeecCCCceEEEEeCCCCCcCceEEEeCCCCe-EEeCCCCe
Confidence 44 45688999999999777899999999988865 6999987 88999999998556999999973333 89999999
Q ss_pred eeecCCCCCCCeEEEEecCCCCCceEEEecCC
Q psy1765 770 CLGSKNRLENTVIVMEMCAQHKDTSWDLVPVG 801 (867)
Q Consensus 770 CLd~~~~~~g~~v~~~~C~~~~~Q~W~~~~~~ 801 (867)
|||+.+...|+.|++++|+++++|+|.|..+.
T Consensus 436 CLd~~~~~~~~~~~~~~C~~~~~Q~W~~~~~~ 467 (472)
T 1xhb_A 436 CLDKATEEDSQVPSIRDCTGSRSQQWLLRNVT 467 (472)
T ss_dssp EEESCCSSSTTSCEEEECCCCGGGCEEECCC-
T ss_pred eEccccCCCCCeEEEEeCCCCCcceEEEeCCc
Confidence 99998655688999999999999999997654
|
| >3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-32 Score=328.02 Aligned_cols=184 Identities=23% Similarity=0.288 Sum_probs=154.9
Q ss_pred ccCceeEEEeecchhhhhhhccCcccCCCCccCCchhHhhhhhc-cccccccccccccCccccCCCcHHHHhhhhhcccC
Q psy1765 453 YTNSLRVAHVWMDEYIEHFLKQRPEARNIDYGDVTDRKQLRARL-GCKSFKWYLDNVYPEMILPSDDEERLKKKWAQVEQ 531 (867)
Q Consensus 453 ~~N~~R~aeVWmDeyk~~~y~~~p~~~~~~~gdis~r~~LR~~l-~CksF~Wyl~nv~p~~~~p~~~~~~~~~~~~~~~~ 531 (867)
.+|++|+|||||||||+++|. +| +++.++||||+|++||++| +||+|+|||++|||++.+|..
T Consensus 422 ~~N~~R~aeVwmD~~k~~~~~-~P-~~~~~~gdvs~~~~Lr~~l~ncksF~wy~~~~~P~~~~~~~-------------- 485 (614)
T 3a21_A 422 NTSSARTATLQVNGQTATTVS-FP-PTGASAGTVSVEVSLSKGSANTLALSGGPATEGITVRPLPG-------------- 485 (614)
T ss_dssp CSSSCEEEEEEETTSCCEEEE-EC-CCCSSCEEEEEEEEECSEEEEEEEEESSSCEEEEEEEECGG--------------
T ss_pred CCCCCceEEEEECCceeEEEe-cC-CCCCCccceeEEEecccCCcceeeecccccccCceeeccCC--------------
Confidence 479999999999999999997 57 6788999999999999997 999999999999999875421
Q ss_pred CCcccccccccccccceeeeecCCCceecccCC-CCCCCcEEEEecCCCCCCceeeecCCCceEEeeceeeecC------
Q psy1765 532 PKFQPWYSRARNYTSHFHIRLSSTDLCLTSKVD-KTKGSPLVLKKCDELSKTQHWSKTDKSELVLAELLCLDAG------ 604 (867)
Q Consensus 532 ~~~~~~~g~~rn~~~~g~ir~~~~~~CLD~~~~-~~~g~~v~l~~C~~~~~~Q~w~~t~~~~i~~~~~~CLd~~------ 604 (867)
...|+|++.++++|||+.++ ..+|++|++|+||+ +.+|+|+++.+|+|+..+++|||+.
T Consensus 486 -------------~~~g~i~n~~sg~CLDv~~~~~~~g~~v~l~~C~g-~~nQ~w~~~~~g~ir~~~~~CLdv~~~~~~~ 551 (614)
T 3a21_A 486 -------------TNGALVTGKQSGRCADIYNNTITNGTQAELWDCNG-GPNQSWTYTSRKELVLYGNKCLDAYNLGTTN 551 (614)
T ss_dssp -------------GCBBCCEETTTCCEEECGGGCCCTTCBCEEECCCC-CGGGCBEECTTSCEEETTTEEEEEGGGCCST
T ss_pred -------------CceEEEEECCCCcEEEeCCCCCCCCCEEEEECCCC-CCCceEEEECCceEEECCCcEEECCCCcCCC
Confidence 11256778899999999874 45799999999998 5799999999999998778999985
Q ss_pred CCccEEEeCCCCCCCcceeeeeeeccceeeecccCcccccCCChhhhhhhhhccccCCCCCcccccccccccceEEEecC
Q psy1765 605 ATKPKLTKCHEMGGSQEYWCWLRCKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSG 684 (867)
Q Consensus 605 g~~v~l~~C~~~~~~Q~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~~~~~~~~~i~~~~ 684 (867)
|+.++++.|++ +++|+| .| ..+++|+|..
T Consensus 552 G~~V~l~~C~g-~~nQ~W-~~-------------------------------------------------~~~g~i~~~~ 580 (614)
T 3a21_A 552 GTKVVIWDCNG-QANQKW-NI-------------------------------------------------NSDGTITNVN 580 (614)
T ss_dssp TCBEEEEECCC-CGGGCE-EE-------------------------------------------------CTTSCEEETT
T ss_pred CceEEEeCCCC-CCccEE-EE-------------------------------------------------cCCCeEEECC
Confidence 45689999998 566764 32 1236799999
Q ss_pred CCceEee-cCCCCCCCceEEecCCCCCCCccEEEc
Q psy1765 685 TDLCLTS-KVDKTKGSPLVLKKCDELSKTQRWSKT 718 (867)
Q Consensus 685 sg~CLd~-~~~~~~g~~v~l~~C~~~~~~Q~W~~~ 718 (867)
+++|||+ +.++.+|+.|++++|++ +.+|+|.++
T Consensus 581 sg~CLdv~~~st~~g~~v~~~~C~g-~~~Q~W~~~ 614 (614)
T 3a21_A 581 AGLCLDAYNAATANGTSLVLWSCGT-GDNQKWTVT 614 (614)
T ss_dssp TCCEEEEGGGCCSTTCBEEEECCCS-CGGGCEECC
T ss_pred CCceEecCCCCCCCCCEEEEEcCCC-CcccEEeeC
Confidence 9999999 44566789999999998 889999873
|
| >1ggp_B TKL-1, protein (lectin 1 B chain); sugar binding protein; 2.70A {Trichosanthes kirilowii} SCOP: b.42.2.1 b.42.2.1 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-30 Score=276.33 Aligned_cols=236 Identities=18% Similarity=0.265 Sum_probs=180.6
Q ss_pred eeeeecCCCceecccCC-CCCCCcEEEEecCCCCCCceeeecCCCceEEeeceeeecC---CCccEEEeCCCC-CCCcce
Q psy1765 548 FHIRLSSTDLCLTSKVD-KTKGSPLVLKKCDELSKTQHWSKTDKSELVLAELLCLDAG---ATKPKLTKCHEM-GGSQEY 622 (867)
Q Consensus 548 g~ir~~~~~~CLD~~~~-~~~g~~v~l~~C~~~~~~Q~w~~t~~~~i~~~~~~CLd~~---g~~v~l~~C~~~-~~~Q~~ 622 (867)
+.|++ .+++|||+ ++ ...|++|.+|+||+. .+|+|+|+.+|+|+. .++|||+. |+.|++|+||+. .++|+
T Consensus 6 ~~i~~-~sg~ClDv-~~~~~~g~~v~~~~c~g~-~nQ~w~~~~~g~ir~-~g~CLdv~g~~g~~v~~~~c~~~~~~~Q~- 80 (254)
T 1ggp_B 6 VRIAG-RDGFCADV-NGEGQNGAAIILKKCAEN-DNQLWTLKREATIRS-NGGCLTTAAAEQAKAGIYDCTQATAELSA- 80 (254)
T ss_dssp EEEEC-GGGEEEEE-SSSCCSSCBEEEEECCCC-TTTEEEEETTSCCBS-SSSEEEEECSSSCEEEEECTTTSCHHHHC-
T ss_pred EEEEC-CCCceEeC-CCCcCCCcEEEEEcCCCC-ccceEEEcCCCeEEE-CceEEeccCCCCCEEEEEECCCCCCcCCE-
Confidence 35676 79999999 64 357999999999987 799999999999986 46999986 456899999986 57787
Q ss_pred eeeeeeccceeeecccCcccccCCC-hhhhhhhhhccccCCCCCcccccccccccceEEEecCCCceEeecCCCCCCCce
Q psy1765 623 WCWLRCKSFKWYLDNVYPEMILPSD-DEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSGTDLCLTSKVDKTKGSPL 701 (867)
Q Consensus 623 w~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~q~W~~~~~~~~~~~~i~~~~sg~CLd~~~~~~~g~~v 701 (867)
|.|. .+|++ -+..+..+++.. ......+........+.|+|.+........ ..+...+++|||+.. .++.+
T Consensus 81 W~~~--~~g~i--~n~~sg~cLd~~~~~~g~~v~~~~c~~~~~Q~W~~~~~~~p~~-~~~~g~~~~Cld~~~---~g~~v 152 (254)
T 1ggp_B 81 WEIA--DNGTI--INPASSLVLSSGAANSLLDLGVQTNSYASAQGWRTGNETSASV-TQISGSAQLCMQAGN---GPANL 152 (254)
T ss_dssp CEEC--TTSCE--EETTTTEEEECSSSCTTEECEEECCCCCSTTCCEESSCCSCEE-EEEECGGGCEECCCT---TTTBC
T ss_pred EEEe--cCCCE--EeCCCCeEEeCCCCCCCCEEEEEecCCCCCceEEEeccCCCcc-eeecccCCeeEecCC---CCceE
Confidence 5665 45643 333444444433 122223333344567899999876433222 233456799999843 26789
Q ss_pred EEecCCCCCCCccEEEccCCcEEe--ccCceeeeC----CCCcEEEecCCCCCCCeEEEecCCeeeeecCCCCceeecCC
Q psy1765 702 VLKKCDELSKTQRWSKTDKSELVL--AELLCLDAG----ATKPKLTKCHEMGGSQEWNFVLRDKTPIYSPATGTCLGSKN 775 (867)
Q Consensus 702 ~l~~C~~~~~~Q~W~~~~~~~~~~--~s~~CLD~~----g~~v~~~~C~~~~~~Q~W~~~~~~~~~i~n~~sg~CLd~~~ 775 (867)
.+++|++..++|+|.++.+++++. .+++|||+. |++|++++|++. .+|+|.|..++. |+|+.||+|||+.+
T Consensus 153 ~l~~C~~~~~~Q~W~~~~~g~ir~~~~~~~Cl~~~~~~~g~~V~l~~C~g~-~~Q~W~~~~~g~--i~~~~sg~CLd~~~ 229 (254)
T 1ggp_B 153 WMSECRAGKAEQQWALLTDKSIRSETNSDNCLTSAADAGPKTILLALCSGP-ASQRWVFDDDGS--ILSLYDDKQMDSEG 229 (254)
T ss_dssp CEECCCSSCTTSEEEEETTTEEEESSCTTEEECCCCCSSCCCCBEEECCCC-TTSCCEECTTSS--EEETTTTEEEEESS
T ss_pred EEEcCCCCCccCEEEEcCCCCEEEeCCCCeEEecCCCCCCCEEEEEcCCCC-ccceEEECCCCc--EEeCCCCeEEeCCC
Confidence 999999878899999999999885 468999975 668999999964 599999997664 89999999999976
Q ss_pred CC-CCCeEEEEecCCCCCceEEEec
Q psy1765 776 RL-ENTVIVMEMCAQHKDTSWDLVP 799 (867)
Q Consensus 776 ~~-~g~~v~~~~C~~~~~Q~W~~~~ 799 (867)
.. .++.|++++|+++++|+|.+.+
T Consensus 230 ~~~~~~~v~~~~c~g~~~Q~W~~~~ 254 (254)
T 1ggp_B 230 AAAAAKQIILWWNAAEPNQIWLALF 254 (254)
T ss_dssp SCCSSSCEEEECCCCCGGGCCEEEC
T ss_pred CCCCCceEEEEcCCCCccceEEecC
Confidence 43 3889999999999999999874
|
| >1m2t_B Mistletoe lectin I B chain; ribosome inactivation, ribosome inhibitor, hydrolase; HET: NAG FUC ADE; 1.89A {Viscum album} SCOP: b.42.2.1 b.42.2.1 PDB: 2r9k_B* 3d7w_B* 3cef_B* 1sz6_B* 1pum_B* 1puu_B* 2rg9_B* 3o5w_B* 1onk_B* 1oql_B* 1tfm_B* 1pc8_B* 1yf8_B* 1ce7_B* 2mll_B* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-29 Score=271.77 Aligned_cols=237 Identities=15% Similarity=0.241 Sum_probs=178.6
Q ss_pred eeeeecCCCceecccCCC-CCCCcEEEEecC-CCCCCceeeecCCCceEEeeceeeecC----CCccEEEeCCCC-CCCc
Q psy1765 548 FHIRLSSTDLCLTSKVDK-TKGSPLVLKKCD-ELSKTQHWSKTDKSELVLAELLCLDAG----ATKPKLTKCHEM-GGSQ 620 (867)
Q Consensus 548 g~ir~~~~~~CLD~~~~~-~~g~~v~l~~C~-~~~~~Q~w~~t~~~~i~~~~~~CLd~~----g~~v~l~~C~~~-~~~Q 620 (867)
++|++. +++|||+.++. ..|++|.+|+|+ ....+|+|+|+.+|+|+.. ++|||+. |+.|++|+|++. .++|
T Consensus 12 ~~i~~~-sg~ClDv~~~~~~~g~~v~~~~c~~~~~~~Q~w~~~~~g~ir~~-g~CLdv~~~~~g~~v~~~~c~~~~~~~Q 89 (263)
T 1m2t_B 12 VRIVGR-NGMTVDVRDDDFHDGNQIQLWPSKSNNDPNQLWTIKKDGTIRSN-GSCLTTYGYTAGVYVMIFDCNTAVREAT 89 (263)
T ss_dssp ECEECG-GGCEEEEGGGCCSTTCBEEEECCCCSCCGGGCEEECTTSCEEET-TEEEEESCSSTTCBEEEEETTTSCGGGG
T ss_pred EEEEcC-CCCEEECCCCCCCCCCEEEEeeCCCCCChhceeEECCCCeEEEc-cEEEcccccCCCCEEEEEeCCCCCCccc
Confidence 456665 89999998754 579999999995 4467999999999999876 6999985 456899999997 7788
Q ss_pred ceeeeeeeccceeeecccCcccccCCC-hhhhhhhhhccccCCCCCcccccccccccceEEEecCCCceEeecCCCCCCC
Q psy1765 621 EYWCWLRCKSFKWYLDNVYPEMILPSD-DEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSGTDLCLTSKVDKTKGS 699 (867)
Q Consensus 621 ~~w~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~q~W~~~~~~~~~~~~i~~~~sg~CLd~~~~~~~g~ 699 (867)
+| .|. .+|++ -+..+..+++.. ..+..............|+|.+...... ...+++..+++|||+. |+
T Consensus 90 ~W-~~~--~~g~i--~n~~sg~cLd~~~~~~g~~v~~~~c~~~~~Q~W~~~~~~~~-~~~~i~~~s~~CLd~~-----g~ 158 (263)
T 1m2t_B 90 IW-QIW--GNGTI--INPRSNLVLAASSGIKGTTLTVQTLDYTLGQGWLAGNDTAP-RETTIYGFRDLCMESA-----GG 158 (263)
T ss_dssp CC-EEC--TTSCE--EETTTTEEEECSSCSTTCBCEEECCCCCGGGCCEESSCCSC-EEEEEECGGGCEEEEE-----TT
T ss_pred EE-EEC--CCCCE--EeCCCCceEccCCCCccceEEEeccCCCcCcEEEEecccce-eeeeecccCccccccC-----CC
Confidence 74 654 45653 333444444332 1222223333344567899998764221 2234456789999974 57
Q ss_pred ceEEecCCCCCCCccEEEccCCcEEec--cCceeeeC----CCCcEEEecCCCCCCCeEEEecCCeeeeecCCCCceeec
Q psy1765 700 PLVLKKCDELSKTQRWSKTDKSELVLA--ELLCLDAG----ATKPKLTKCHEMGGSQEWNFVLRDKTPIYSPATGTCLGS 773 (867)
Q Consensus 700 ~v~l~~C~~~~~~Q~W~~~~~~~~~~~--s~~CLD~~----g~~v~~~~C~~~~~~Q~W~~~~~~~~~i~n~~sg~CLd~ 773 (867)
.|.+++|++...+|+|.|+.++.++.. +.+||++. |+.|++++|+....+|+|.|..++. |+|+.||+|||+
T Consensus 159 ~v~l~~C~g~~~~Q~W~~~~~g~ir~~~~~~lcl~~~~~~~G~~v~~~~C~~~~~~Q~W~~~~~g~--i~~~~sg~cLDv 236 (263)
T 1m2t_B 159 SVYVETCTAGQENQRWALYGDGSIRPKQLQSQCLTNGRDSISTVINIVSCSAGSSGQRWVFTNEGA--ILNLKNGLAMDV 236 (263)
T ss_dssp EEEEECCCTTCGGGCEEECTTSCEEETTCTTEEEECSSCSTTCBCEEEESTTCCGGGCEEECTTSC--EEETTTCCEEEE
T ss_pred EEEEEecCCCCcccEEEEcCCCeEEEcCCCceeeccCCcCCCCEEEEEECCCCCcccEEEEcCCCC--EEECCCCeEEec
Confidence 899999999668999999999988865 47899873 6799999993335699999997764 899999999999
Q ss_pred CCCC-CCCeEEEEecCCCCCceEEEec
Q psy1765 774 KNRL-ENTVIVMEMCAQHKDTSWDLVP 799 (867)
Q Consensus 774 ~~~~-~g~~v~~~~C~~~~~Q~W~~~~ 799 (867)
.+.. .|+.|++|+|+++++|+|.|.|
T Consensus 237 ~~~~~~g~~v~~~~c~g~~nQ~W~~~~ 263 (263)
T 1m2t_B 237 AQANPSLQRIIIYPATGNPNQMWLPVP 263 (263)
T ss_dssp GGGCGGGCCEEEECCCCCGGGCCEEEC
T ss_pred CCCCCCCCEEEEEeCCCCccCEEEecC
Confidence 8632 2889999999999999999975
|
| >2aai_B Ricin (B chain); glycosidase; HET: GAL BGC NDG NAG BMA MAN; 2.50A {Ricinus communis} SCOP: b.42.2.1 b.42.2.1 PDB: 3rti_B* 3rtj_B* 1rzo_B* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-29 Score=270.64 Aligned_cols=237 Identities=15% Similarity=0.238 Sum_probs=178.6
Q ss_pred eeeeecCCCceecccCCC-CCCCcEEEEecC-CCCCCceeeecCCCceEEeeceeeecC----CCccEEEeCCCC-CCCc
Q psy1765 548 FHIRLSSTDLCLTSKVDK-TKGSPLVLKKCD-ELSKTQHWSKTDKSELVLAELLCLDAG----ATKPKLTKCHEM-GGSQ 620 (867)
Q Consensus 548 g~ir~~~~~~CLD~~~~~-~~g~~v~l~~C~-~~~~~Q~w~~t~~~~i~~~~~~CLd~~----g~~v~l~~C~~~-~~~Q 620 (867)
++|++. +++|||+.++. .+|++|.+|+|+ ....+|+|+|+.+|+|+. .++|||+. |+.|++|+|++. ..+|
T Consensus 11 ~~i~~~-sg~cldv~~~~~~~g~~v~~~~c~~~~~~~Q~W~~~~~g~ir~-~g~cLdv~g~~~g~~v~~~~c~~~~~~~Q 88 (262)
T 2aai_B 11 VRIVGR-NGLCVDVRDGRFHNGNAIQLWPCKSNTDANQLWTLKRDNTIRS-NGKCLTTYGYSPGVYVMIYDCNTAATDAT 88 (262)
T ss_dssp ECEECG-GGCEEEEGGGCCSTTCBEEEECCCSSCCGGGCEEECTTSBEEE-TTEEEEESCSSTTCBEEEEETTTSCGGGS
T ss_pred EEEEcC-CCceEEcCCCCCCCCCEEEEeeCCCCCChhceEEEeCCceEEE-CCEEEeccCCCCCCEEEEEeCCCCCCccc
Confidence 456655 89999998754 579999999994 246699999999999886 57999986 456899999986 6778
Q ss_pred ceeeeeeeccceeeecccCcccccCCC-hhhhhhhhhccccCCCCCcccccccccccceEEEecCCCceEeecCCCCCCC
Q psy1765 621 EYWCWLRCKSFKWYLDNVYPEMILPSD-DEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSGTDLCLTSKVDKTKGS 699 (867)
Q Consensus 621 ~~w~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~q~W~~~~~~~~~~~~i~~~~sg~CLd~~~~~~~g~ 699 (867)
+ |.+. .+|++ -+..+..+++.. ...............+.|+|.+.+........|++. +++|||+. |+
T Consensus 89 ~-W~~~--~~G~i--~n~~sg~cLd~~~~~~g~~v~~~~c~g~~~Q~W~~~~~~~~~~~~i~~~-~~~CLd~~-----g~ 157 (262)
T 2aai_B 89 R-WQIW--DNGTI--INPRSSLVLAATSGNSGTTLTVQTNIYAVSQGWLPTNNTQPFVTTIVGL-YGLCLQAN-----SG 157 (262)
T ss_dssp B-CEEC--TTSCE--EEETTEEEEECSSCSTTCBCEEEECCCCGGGCCEECSCCSCEEEEEECG-GGCEEEEE-----TT
T ss_pred e-EEEc--CCCCE--EeCCCCceEecCCCCCCceeEEEecCCCCccEEEEcCCCCCceeeeecc-CCeeeecC-----Cc
Confidence 7 4554 46643 344444554433 112222233334457889999886432223445543 79999984 46
Q ss_pred ceEEecCCCCCCCccEEEccCCcEEec--cCceeeeC----CCCcEEEecCCCCCCCeEEEecCCeeeeecCCCCceeec
Q psy1765 700 PLVLKKCDELSKTQRWSKTDKSELVLA--ELLCLDAG----ATKPKLTKCHEMGGSQEWNFVLRDKTPIYSPATGTCLGS 773 (867)
Q Consensus 700 ~v~l~~C~~~~~~Q~W~~~~~~~~~~~--s~~CLD~~----g~~v~~~~C~~~~~~Q~W~~~~~~~~~i~n~~sg~CLd~ 773 (867)
.|.+++|++...+|+|.++..+.++.. +++|||+. |+.|++++|+....+|+|.|..++. |+|+.||+|||+
T Consensus 158 ~v~l~~C~~~~~~Q~w~~~~~g~ir~~~~~~~CLd~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~g~--i~~~~sg~CLdv 235 (262)
T 2aai_B 158 QVWIEDCSSEKAEQQWALYADGSIRPQQNRDNCLTSDSNIRETVVKILSCGPASSGQRWMFKNDGT--ILNLYSGLVLDV 235 (262)
T ss_dssp EEEEECCCTTSSCCCEEECTTSCEEETTSTTEEEEECCSSCSSCEEEEESTTCCTTSCCEECTTSC--EECTTTCCEEEE
T ss_pred eEEEEecCCCCCcCEEEEeCCccEEECCCCCceEccCCCCCCCeEEEEcCCCCCCcCeEEECCCCc--EEECCCCeEEee
Confidence 899999998688999999999998875 58999986 4689999996556799999997664 889999999999
Q ss_pred CCCC-CCCeEEEEecCCCCCceEEEec
Q psy1765 774 KNRL-ENTVIVMEMCAQHKDTSWDLVP 799 (867)
Q Consensus 774 ~~~~-~g~~v~~~~C~~~~~Q~W~~~~ 799 (867)
.+.. .|+.|++++|+++++|+|.|.|
T Consensus 236 ~~~~~~g~~v~~~~c~g~~~Q~W~~~~ 262 (262)
T 2aai_B 236 RASDPSLKQIILYPLHGDPNQIWLPLF 262 (262)
T ss_dssp GGGCGGGCCEEEECCCCCGGGCCEEEC
T ss_pred cCCCCCCCEEEEEcCCCCccCcEEecC
Confidence 6332 3889999999999999999975
|
| >3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.96 E-value=9.6e-30 Score=266.68 Aligned_cols=218 Identities=18% Similarity=0.182 Sum_probs=148.0
Q ss_pred CCCcEEEEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHH
Q psy1765 50 TLPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIR 129 (867)
Q Consensus 50 ~~P~vSVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~ 129 (867)
.+|+||||||+||++. .|.+||+||++|+++++ |||||||+|+|++
T Consensus 3 ~~p~vsViIp~yn~~~-~l~~~l~Sl~~q~~~~~--eiIvvDd~S~d~t------------------------------- 48 (240)
T 3bcv_A 3 LIPKVSVIVPIYNVEK-YLDQCVQALLAQTLSDI--EIILIDDESPDNC------------------------------- 48 (240)
T ss_dssp CCCSEEEEEEESSCTT-THHHHHHHHHTCSSSSE--EEEEEECCCSSSH-------------------------------
T ss_pred CCCcEEEEEecCCCHH-HHHHHHHHHHhCcCCCe--EEEEEECCCCcCH-------------------------------
Confidence 4689999999999875 99999999999999988 9999999999883
Q ss_pred HhhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhcCCCEEEE
Q psy1765 130 ARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLVF 209 (867)
Q Consensus 130 a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A~Gd~llf 209 (867)
.+.+.++.++. ++|++++. +|.|++.|+|.|+++|+||||+|
T Consensus 49 -----------------------------------~~~~~~~~~~~--~~i~~i~~-~n~G~~~a~N~g~~~a~g~~i~~ 90 (240)
T 3bcv_A 49 -----------------------------------PKICDDYAAQY--PNIKVIHK-KNAGLGMACNSGLDVATGEYVAF 90 (240)
T ss_dssp -----------------------------------HHHHHHHHHHC--SSEEEEEC-CCCCHHHHHHHHHHHCCSSEEEE
T ss_pred -----------------------------------HHHHHHHHhhC--CCEEEEEC-CCCChHHHHHHHHHHcCCCEEEE
Confidence 34566666665 78999985 59999999999999999999999
Q ss_pred EcCCcccCccchHHHHHHHHhcCCceeeeEEeeecCCCc---eeccccccccccccccccccccCCcCcCCCCCCCCCcc
Q psy1765 210 LDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTF---QYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPI 286 (867)
Q Consensus 210 LDaD~~v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~~~---~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~ 286 (867)
||+|+.+.|+||+.+++.+.+.+..++.+....++.+.. ...........+........ ........ ......
T Consensus 91 lD~Dd~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~ 166 (240)
T 3bcv_A 91 CDSDDYVDSDMYMTMYNVAQKYTCDAVFTGLKRITMAGIPTGTVTHQKEFKLYKNKNEIHTL---LKDLIASD-PYAREE 166 (240)
T ss_dssp CCTTCCCCTTHHHHHHHHHHHHTCSEEEC--------------------CEEECSHHHHHHH---HGGGTSSC-HHHHHH
T ss_pred ECCCCcCCHHHHHHHHHHHHhcCCCEEEEeeEEEccCCccccccccccccccccCHHHHHHH---HHHHhhcc-hhhccc
Confidence 999999999999999999988555555433322222211 00000000000000000000 00000000 000000
Q ss_pred cccccccceEeEeHHHHHHhC-CCCCCCCCCcccchHHHHHHHHcCCeEEEEcccEEEEE
Q psy1765 287 LSPTMAGGLFAIDRQYFDSLG-QYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGHV 345 (867)
Q Consensus 287 ~~~~~~G~~~airR~~f~~vG-gfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V~H~ 345 (867)
....++|+++++||++|+++| |||+.++.+ +||+||++|++.+|+++.++|.+ ++|+
T Consensus 167 ~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~-~eD~~~~~r~~~~g~~i~~~~~~-~~~y 224 (240)
T 3bcv_A 167 RAIQVSAKVVLYRRNLIEKKHLRFVSERILP-SEDLIFNVDVLANSNIVCVLPQT-FYNY 224 (240)
T ss_dssp HHHHHTCSCEEEEHHHHHHTTCCCCCTTTCT-THHHHHHHHHHTTCSCEEECC-------
T ss_pred cccccchhheeeeHHHHHHcCCccCCCCCcc-CCCHHHHHHHHHhCCEEEEECCC-eEEE
Confidence 112345788999999999999 999998755 69999999999999999999988 4543
|
| >1abr_B Abrin-A; glycosidase/carbohydrate complex, lectin, lectin (agglutinin), glycoprotein, plant SEED protein, plant toxin; HET: NDG NGZ MAN BMA BGC; 2.14A {Abrus precatorius} SCOP: b.42.2.1 b.42.2.1 PDB: 2zr1_B* 2q3n_B* | Back alignment and structure |
|---|
Probab=99.96 E-value=3e-29 Score=268.91 Aligned_cols=235 Identities=18% Similarity=0.279 Sum_probs=178.9
Q ss_pred eeeeecCCCceecccCC-CCCCCcEEEEec-CCCCCCceeeecCCCceEEeeceeeecC----CCccEEEeCCCC-CCCc
Q psy1765 548 FHIRLSSTDLCLTSKVD-KTKGSPLVLKKC-DELSKTQHWSKTDKSELVLAELLCLDAG----ATKPKLTKCHEM-GGSQ 620 (867)
Q Consensus 548 g~ir~~~~~~CLD~~~~-~~~g~~v~l~~C-~~~~~~Q~w~~t~~~~i~~~~~~CLd~~----g~~v~l~~C~~~-~~~Q 620 (867)
+.|++. +++|||+.++ ...|++|.+|+| |..+.+|+|+|+.+|+|+. .++|||+. |+.|++|+|++. .++|
T Consensus 16 ~~i~~~-sg~CLDv~~~~~~~g~~v~~~~c~~~~~~~Q~w~~~~~g~ir~-~g~CLdv~g~~~g~~v~~~~c~~~~~~~Q 93 (267)
T 1abr_B 16 VRIGGR-DGMCVDVYDNGYHNGNRIIMWKCKDRLEENQLWTLKSDKTIRS-NGKCLTTYGYAPGSYVMIYDCTSAVAEAT 93 (267)
T ss_dssp ECEECG-GGCEEEEGGGCCSTTCBEEEECCCSSCCGGGCEEECTTSBEEE-TTEEEEESCSSTTCBEEEECTTTSCGGGS
T ss_pred EEEEcC-CCCEEECCCCCCCCCcEEEEEecCCCCChhcEEEEccCceEEE-CCEEEcccCCCCCCEEEEEeCCCCCCccC
Confidence 456666 8999999874 457999999999 5667799999999999986 57999997 456899999987 6788
Q ss_pred ceeeeeeeccceeeecccCcccccCCC-hhhhhhhhhccccCCCCCcccccccccccceEEEecCCCceEeecCCCCCCC
Q psy1765 621 EYWCWLRCKSFKWYLDNVYPEMILPSD-DEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSGTDLCLTSKVDKTKGS 699 (867)
Q Consensus 621 ~~w~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~q~W~~~~~~~~~~~~i~~~~sg~CLd~~~~~~~g~ 699 (867)
+ |.|. .+|++ -+..+..+++.. ...............+.|.|.+.... ......++..+++||+++ |+
T Consensus 94 ~-W~~~--~~G~i--~n~~sg~cLd~~~~~~g~~v~~~~c~g~~~Q~W~~~~~~-~~~~~~~~~~~~~CL~~~-----g~ 162 (267)
T 1abr_B 94 Y-WEIW--DNGTI--INPKSALVLSAESSSMGGTLTVQTNEYLMRQGWRTGNNT-SPFVTSISGYSDLCMQAQ-----GS 162 (267)
T ss_dssp B-CEEC--TTSCE--EETTTTEEEECCCSSTTCBCEEECCCCCGGGCCEESSCC-CCEEECEECGGGCEEEEE-----TT
T ss_pred E-EEEe--cCCcE--EeCCCCcEEeccCCCCCcEEEEEeCCCCccceEEEcCCc-cceEEEeecccCcCeecC-----CC
Confidence 7 4664 46653 333344444332 12222333334445788999987632 122334456789999984 46
Q ss_pred ceEEecCCCCCCCccEEEccCCcEEec--cCceeeeC----CCCcEEEecCCCCCCCeEEEecCCeeeeecCCCCceeec
Q psy1765 700 PLVLKKCDELSKTQRWSKTDKSELVLA--ELLCLDAG----ATKPKLTKCHEMGGSQEWNFVLRDKTPIYSPATGTCLGS 773 (867)
Q Consensus 700 ~v~l~~C~~~~~~Q~W~~~~~~~~~~~--s~~CLD~~----g~~v~~~~C~~~~~~Q~W~~~~~~~~~i~n~~sg~CLd~ 773 (867)
.|.+++|++...+|+|.|..++.++.. +++|||+. |+.|++++|+....+|+|.|..++. |+|+.||+|||+
T Consensus 163 ~v~l~~C~~~~~~Q~W~~~~~g~i~~~~~~~~CLd~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~g~--i~~~~sg~cLDv 240 (267)
T 1abr_B 163 NVWMADCDSNKKEQQWALYTDGSIRSVQNTNNCLTSKDHKQGSTILLMGCSNGWASQRWVFKNDGS--IYSLYDDMVMDV 240 (267)
T ss_dssp EEEEECCCTTCGGGCEEECTTSCEEETTEEEEEEEESSSSTTCBEEEEESTTCCGGGCCEECTTSC--EEETTTTEEEEE
T ss_pred eEEEEecCCCCcccEEEEeCCCCEEEecCCCeEEECcCCCCCCEEEEEECCCCCccCEEEECCCCe--EEECCCCeEEEe
Confidence 899999999668999999988888864 48999985 6699999995545699999998664 889999999999
Q ss_pred CCCCC-CCeEEEEecCCCCCceEEE
Q psy1765 774 KNRLE-NTVIVMEMCAQHKDTSWDL 797 (867)
Q Consensus 774 ~~~~~-g~~v~~~~C~~~~~Q~W~~ 797 (867)
.+... ++.|++|+|+++++|+|.+
T Consensus 241 ~~~~~~g~~v~~~~c~g~~nQ~W~~ 265 (267)
T 1abr_B 241 KGSDPSLKQIILWPYTGKPNQIWLT 265 (267)
T ss_dssp GGGCGGGCCEEEECCCCCGGGCCEE
T ss_pred CCCCcCCceEEEECCCCCccceEEe
Confidence 76443 7899999999999999998
|
| >2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.7e-28 Score=291.31 Aligned_cols=273 Identities=18% Similarity=0.214 Sum_probs=187.0
Q ss_pred CCCHhhhhhhhcCccccC----cceeeec------ccCCCCCCCCCCcccccc------------ccCCCCCCcEEEEEE
Q psy1765 2 VLNEQDLITRDEGYRYYG----FNALISN------KLSLDRKIPDTRNSLCAN------------QTFPSTLPSTSVIIC 59 (867)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~----~~~~~~~------~~~~~r~~~~~r~~~c~~------------~~~~~~~P~vSVIIp 59 (867)
.|+++++....+.+++++ .|+.+++ ..|++|..+..+.+.+.- ...+..+|+||||||
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~vsviIp 100 (625)
T 2z86_A 21 SLNEVEKNEIISKYREITAKKSERAELKEVEPIPLDWPSDLTLPPLPESTNDYVWAGKRKELDDYPRKQLIIDGLSIVIP 100 (625)
T ss_dssp CCCHHHHHHHHHHHHHHTCCCCEECCCCCCCSSCTTCCTTCCCCCCCSSTTCHHHHHTCCCC-------CCCCCEEEEEE
T ss_pred cccchhHHHHHHHHHHHhhhccccccccccCCCCCCCcccCCCCCCCCCccccchhhhcccccCCCcccccCCcEEEEEe
Confidence 578888888777777666 7777777 556666664444433321 112356799999999
Q ss_pred eCCCChHHHHHHHHHHHhcCcc-ccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHHHhhhhhhhh
Q psy1765 60 FYNEHPATLYRSVQTLLSRTGQ-SLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRARMFGAKYA 138 (867)
Q Consensus 60 ~yNe~~~~l~~~l~Svl~qt~~-~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~a~~~g~~~a 138 (867)
+||++ ..|.+||+||++|+++ .+ |||||||+|+|++
T Consensus 101 ~~n~~-~~l~~~l~sl~~q~~~~~~--eiivvDd~s~d~t---------------------------------------- 137 (625)
T 2z86_A 101 TYNRA-KILAITLACLCNQKTIYDY--EVIVADDGSKENI---------------------------------------- 137 (625)
T ss_dssp ESSCH-HHHHHHHHHHHTCCCSSCE--EEEEEEESCSSCH----------------------------------------
T ss_pred cCCcH-HHHHHHHHHHHhhccCCCe--EEEEEeCCCchhH----------------------------------------
Confidence 99976 5999999999999765 55 9999999999882
Q ss_pred ccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCC-CcCchhHHhHhhhhcCCCEEEEEcCCcccC
Q psy1765 139 TGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSK-REGLIRARMFGAKYATGKVLVFLDSHIEVN 217 (867)
Q Consensus 139 ~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~-n~G~a~ArN~G~~~A~Gd~llfLDaD~~v~ 217 (867)
.+.+.++.. ..++++++.+. +.|+++|+|.|++.|+||||+|+|+|+.++
T Consensus 138 --------------------------~~~~~~~~~---~~~i~~i~~~~~~~g~~~a~N~g~~~a~g~~v~~lD~D~~~~ 188 (625)
T 2z86_A 138 --------------------------EEIVREFES---LLNIKYVRQKDYGYQLCAVRNLGLRAAKYNYVAILDCDMAPN 188 (625)
T ss_dssp --------------------------HHHHHTTTT---TSCEEEEEECCCSCCHHHHHHHHHHHCCSSEEEEECTTEEEC
T ss_pred --------------------------HHHHHHhhh---cCCeEEEEeCCCCcchhHHHHHHHHhCCcCEEEEECCCCCCC
Confidence 222332211 24788888774 346999999999999999999999999999
Q ss_pred ccchHHHHHHHHhcCCceeeeEEeeecCCCceecc---c-------------cccccccccccccccccCCcCcCCCCCC
Q psy1765 218 THWLEPLLVPIAERTNTVTVPIIDIINADTFQYTS---S-------------ALVRGGFNWGLHFKWENLPKGTLNSSED 281 (867)
Q Consensus 218 p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~~~~~~~---~-------------~~~~g~f~~~l~~~~~~~~~~~~~~~~~ 281 (867)
|+||+.+++.+.+++..++++....++.....+.. . ....+.+.......|........ ...
T Consensus 189 ~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 266 (625)
T 2z86_A 189 PLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVAGKVEQNKSVDWRIEHFKNT--DNL 266 (625)
T ss_dssp TTHHHHHHHHHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC---------------CCCTHHHHHHHT--TTT
T ss_pred HHHHHHHHHHHhcCCceEEEEeeeeccCcccchhhcccchHHhhhcchhccCCchhhhhccCCccccchhhhccc--ccc
Confidence 99999999999987765443333233322211100 0 00001110000011100000000 000
Q ss_pred CCCcccccccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEcccEEEEEecc
Q psy1765 282 FIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGHVFRS 348 (867)
Q Consensus 282 ~~~p~~~~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V~H~~r~ 348 (867)
.........+.|+++++||++|+++||||+.+..||+||+||++|++++|+++.++|++.++|..+.
T Consensus 267 ~~~~~~~~~~~g~~~~~rr~~l~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~~~~ 333 (625)
T 2z86_A 267 RLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRSVEGAMAYHQEPP 333 (625)
T ss_dssp TTCSCGGGGCCTTEEEEETHHHHHHCCCCTTCSSCCCHHHHHHHHHHHTTCEEEECGGGCEEEECCC
T ss_pred cccCCceeEEeeceeeeEHHHHHHhCCCccccccCCcchhhhhhhHHhCCceEEEcccchhhccCCc
Confidence 1112234568899999999999999999999999999999999999999999999999999998744
|
| >2vlc_A Cinnamomin, type 2 ribosome-inactivating protein cinnamomin III; ribosome inhibiting proteins, toxin, hydrolase, plant defense; HET: AS5 BMA XYP XYS; 2.95A {Cinnamomum camphora} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.3e-28 Score=285.53 Aligned_cols=238 Identities=15% Similarity=0.282 Sum_probs=179.9
Q ss_pred ceeeeecCCCceecccCCC-CCCCcEEEEecCC-CCCCceeeecCCCceEEeeceeeecC----CCccEEEeCCCC-CCC
Q psy1765 547 HFHIRLSSTDLCLTSKVDK-TKGSPLVLKKCDE-LSKTQHWSKTDKSELVLAELLCLDAG----ATKPKLTKCHEM-GGS 619 (867)
Q Consensus 547 ~g~ir~~~~~~CLD~~~~~-~~g~~v~l~~C~~-~~~~Q~w~~t~~~~i~~~~~~CLd~~----g~~v~l~~C~~~-~~~ 619 (867)
.++|++ .+++|||+.++. .+|++|.+|+|+. .+.+|+|+++.+|+|+. .++|||+. |+.+++|+||+. +++
T Consensus 317 ~~~I~~-~sg~CLDv~g~~~~~G~~v~l~~C~~~g~~nQ~W~~~~~G~ir~-~g~CLdv~g~~~G~~V~~~~C~g~~~~n 394 (570)
T 2vlc_A 317 TVRISG-RNGLCVRVRDGKYNNGNPIQLWPCKQNSDVNQLWTLRRDGTIRS-NGKCLTTNGYSAGDYVMIYDCRTPVTAA 394 (570)
T ss_dssp EECEEE-GGGCEEEEGGGCCSTTCBEEEECCCCSCCGGGCEEECTTSBEEE-TTEEEEESCSSTTCBEEEECCCSSCCGG
T ss_pred eEEEEC-CCCCeEEcCCCCCCCCceEEEEecCCCCChhceEEEcCCceEEE-CCeEEcccCCCCCceEEEEecCCCCCCC
Confidence 356666 489999998754 5799999999942 45799999999999987 47999986 356899999995 778
Q ss_pred cceeeeeeeccceeeecccCcccccCCC-hhhhhhhhhccccCCCCCcccccccccccceEEEecCCCceEeecCCCCCC
Q psy1765 620 QEYWCWLRCKSFKWYLDNVYPEMILPSD-DEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSGTDLCLTSKVDKTKG 698 (867)
Q Consensus 620 Q~~w~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~q~W~~~~~~~~~~~~i~~~~sg~CLd~~~~~~~g 698 (867)
|+| .+. .+|+ +-+..+..+++.. ...........+.....|.|.+..... .....+...+++|||++ |
T Consensus 395 Q~W-~~~--~~G~--i~n~~Sg~CLDv~~~~~g~~v~~~~C~g~~nQ~W~~~~~~~-~~~~~i~~~s~~CLD~~-----g 463 (570)
T 2vlc_A 395 SIW-QFW--ANGT--IINPQSALVLSAESGNPRTTLTVQADIYASRQGWLAGNNTE-PFVTSIVGFNDLCMQAN-----G 463 (570)
T ss_dssp GBC-EEC--TTSC--EEETTTTEEEECSSSSTTCBCEEECCCCCGGGCEEECSCCS-CEEECEECGGGEEEEEE-----T
T ss_pred ceE-EEc--cCCe--EEECCCCceEecCCCcceeeEEEEccCCCCcceEEEeeccc-ccceecccccceecccc-----c
Confidence 885 554 4564 3444555555433 112222333334457889999876321 11223345689999973 5
Q ss_pred CceEEecCCCCCCCccEEEccCCcEEe--ccCceeee-----CCCCcEEEecCCCCCCCeEEEecCCeeeeecCCCCcee
Q psy1765 699 SPLVLKKCDELSKTQRWSKTDKSELVL--AELLCLDA-----GATKPKLTKCHEMGGSQEWNFVLRDKTPIYSPATGTCL 771 (867)
Q Consensus 699 ~~v~l~~C~~~~~~Q~W~~~~~~~~~~--~s~~CLD~-----~g~~v~~~~C~~~~~~Q~W~~~~~~~~~i~n~~sg~CL 771 (867)
+.+.+++|+++..+|+|.++.++.++. .+++|||+ .|+.|++++|+....+|+|.+..++. |+|+.||+||
T Consensus 464 ~~v~l~~C~g~~~~Q~W~~~~dG~ir~~~~~~~CLd~~~~~~~G~~V~l~~C~~~~~~Q~W~~~~~G~--i~n~~sg~cL 541 (570)
T 2vlc_A 464 DAMWVVECESSKAEQKWALYPDGSIRPHQDRDRCLTSTDNHSQGSIIIISSCSPGSEGQRWVFMNDGT--ILNLKNGLVM 541 (570)
T ss_dssp TEEEEEECCTTCSTTCEEECTTSCEEETTCTTEEEEESCTTSTTCBEEEEESTTCCGGGCCEECTTSS--EECTTTCCEE
T ss_pred cceEEEecCCCCcCcEEEEcCCCeEEECCCCCeEeccccccCCCCEEEEEeCCCCCCCCEEEEcCCCC--EEECCCCcEE
Confidence 789999999966899999999998886 46899998 36799999995445699999997775 8999999999
Q ss_pred ecCCCCC-CCeEEEEecCCCCCceEEEec
Q psy1765 772 GSKNRLE-NTVIVMEMCAQHKDTSWDLVP 799 (867)
Q Consensus 772 d~~~~~~-g~~v~~~~C~~~~~Q~W~~~~ 799 (867)
|+.+... |+.|++|+|+++++|+|.|.|
T Consensus 542 Dv~~~~~~g~~v~~~~c~g~~nQ~W~~vp 570 (570)
T 2vlc_A 542 DVKGSDPSLHQIIIWPATGKPNQKWLPLL 570 (570)
T ss_dssp EEGGGCGGGCCEEEECCCSSGGGCCEECC
T ss_pred eccCCCCCCCeEEEEcCCCCcccceEecC
Confidence 9976433 889999999999999999975
|
| >4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=4.6e-28 Score=289.51 Aligned_cols=245 Identities=17% Similarity=0.087 Sum_probs=171.6
Q ss_pred CCCcEEEEEEeCCCChHHHHHHHHHHHhcCc---cccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchh
Q psy1765 50 TLPSTSVIICFYNEHPATLYRSVQTLLSRTG---QSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREG 126 (867)
Q Consensus 50 ~~P~vSVIIp~yNe~~~~l~~~l~Svl~qt~---~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g 126 (867)
..|+||||||+||++. .|.+||+||++|++ ..+ |||||||||+|++
T Consensus 178 ~~pkVSVVIptYN~~~-~L~~~L~SL~~qt~~~~~~~--EIIVVDNgStD~s---------------------------- 226 (657)
T 4fix_A 178 GTANIAVGIPTFNRPA-DCVNALRELTADPLVDQVIG--AVIVPDQGERKVR---------------------------- 226 (657)
T ss_dssp SCCCEEEECCBSSCHH-HHHHHHHHHTTSHHHHTTEE--EEEEEECSSSCGG----------------------------
T ss_pred CCCeEEEEEEecCCHH-HHHHHHHHHHcCccccCCCC--EEEEEECcCCCcc----------------------------
Confidence 4589999999999665 99999999999997 555 9999999999862
Q ss_pred hHHHhhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhcC---
Q psy1765 127 LIRARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYAT--- 203 (867)
Q Consensus 127 i~~a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A~--- 203 (867)
. ...+.++++.. .++|++|+++ |.|+++|+|.|++.|.
T Consensus 227 ------------------------------------~-~~~~~e~~~~~-~~~I~vI~~~-N~G~a~a~N~Gl~~A~g~~ 267 (657)
T 4fix_A 227 ------------------------------------D-HPDFPAAAARL-GSRLSIHDQP-NLGGSGGYSRVMYEALKNT 267 (657)
T ss_dssp ------------------------------------G-STTHHHHHHHH-GGGEEEEECC-CCHHHHHHHHHHHHHHHHC
T ss_pred ------------------------------------c-hHHHHHHHHhc-CCCEEEEECC-CCCHHHHHHHHHHHHHhcC
Confidence 0 11122233222 2589999998 9999999999999994
Q ss_pred -CCEEEEEcCCcccCccchHHHHHHHHhcCC-ceeeeEEeeecCCCceeccc-cccccccccccccccccCCcCc-----
Q psy1765 204 -GKVLVFLDSHIEVNTHWLEPLLVPIAERTN-TVTVPIIDIINADTFQYTSS-ALVRGGFNWGLHFKWENLPKGT----- 275 (867)
Q Consensus 204 -Gd~llfLDaD~~v~p~wLe~Ll~~l~~~~~-~vv~p~i~~i~~~~~~~~~~-~~~~g~f~~~l~~~~~~~~~~~----- 275 (867)
+|||+|||+|++++|+||+.+++.+..++. ++|+|.+...+......... ....+++.| ...+...
T Consensus 268 ~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g~~~~~~~~~~------~~~~~~~~~~~f 341 (657)
T 4fix_A 268 DCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMW------TAAPHAEYDHDF 341 (657)
T ss_dssp CCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCSCEEEETTTTEE------EECTTCCSCEET
T ss_pred CCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeecccEeccccccc------cccccccccccc
Confidence 589999999999999999999999998765 67777665444332211100 001111111 1110000
Q ss_pred ----CCC----CCCCCCcccccccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEcccEEEEEec
Q psy1765 276 ----LNS----SEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGHVFR 347 (867)
Q Consensus 276 ----~~~----~~~~~~p~~~~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V~H~~r 347 (867)
+.. .........+..++|++++|+|++|+++|+|| .++++ +||+|||+|+.++|++++++|.+.|+|...
T Consensus 342 ~~~~l~~~~~~~~~~~~~~~v~~~~g~~~lirr~v~~~vGgfd-~~F~~-~ED~Dl~lR~~~~G~ki~~~p~a~V~H~~~ 419 (657)
T 4fix_A 342 AEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELGQPL-PLFIK-WDDADYGLRAAEHGYPTVTLPGAAIWHMAW 419 (657)
T ss_dssp TTSCSSCSSHHHHGGGBCCCCSBCCTTEEEEEHHHHHHHCSCC-SCSSS-SHHHHHHHHHHHTTCCEEEEEEEEEEECCS
T ss_pred cccccccccccccccccceeccccchhHhHhhHHHHHHhCCCh-hHhcc-CcHHHHHHHHHHcCCeEEEECCEEEEEcCc
Confidence 000 00011234566888999999999999999999 56676 699999999999999999999999999543
Q ss_pred cCCCCCCCCCCchhhhhhHHHHHhc
Q psy1765 348 SRRPYNNGHNEDPLTRNSLRVAHVW 372 (867)
Q Consensus 348 ~~~~y~~~~~~~~~~rN~~R~a~~w 372 (867)
.......+...+...||...++.++
T Consensus 420 ~~~~~~s~~r~Yy~~RN~l~~~~k~ 444 (657)
T 4fix_A 420 SDKDDAIDWQAYFHLRNRLVVAAMH 444 (657)
T ss_dssp SSSCCTTSTHHHHHHHHHHHHHHHH
T ss_pred CccccccHHHHHHHHHHHHHHHHHh
Confidence 2222122233456677877666554
|
| >1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.6e-27 Score=250.65 Aligned_cols=198 Identities=12% Similarity=0.167 Sum_probs=152.6
Q ss_pred CcEEEEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHHHh
Q psy1765 52 PSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRAR 131 (867)
Q Consensus 52 P~vSVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~a~ 131 (867)
|+||||||+||++. .|.+||+||++|+++++ |||||||||+|++
T Consensus 1 p~vSViIp~yn~~~-~l~~~l~Sl~~q~~~~~--eiivvDd~S~d~t--------------------------------- 44 (255)
T 1qg8_A 1 PKVSVIMTSYNKSD-YVAKSISSILSQTFSDF--ELFIMDDNSNEET--------------------------------- 44 (255)
T ss_dssp CCEEEEEEESSCTT-THHHHHHHHHTCSCCCE--EEEEEECSCCHHH---------------------------------
T ss_pred CeEEEEEEcCCCHH-HHHHHHHHHHhccCCce--EEEEEECCCCchH---------------------------------
Confidence 78999999999875 99999999999999988 9999999999872
Q ss_pred hhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcC--------CCcCchhHHhHhhhhcC
Q psy1765 132 MFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTS--------KREGLIRARMFGAKYAT 203 (867)
Q Consensus 132 ~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~--------~n~G~a~ArN~G~~~A~ 203 (867)
.+.+.++.. .++|++++.+ +|.|++.|+|.|++.|+
T Consensus 45 ---------------------------------~~~~~~~~~---~~~i~~i~~~~~~~~~~~~n~G~~~a~N~gi~~a~ 88 (255)
T 1qg8_A 45 ---------------------------------LNVIRPFLN---DNRVRFYQSDISGVKERTEKTRYAALINQAIEMAE 88 (255)
T ss_dssp ---------------------------------HHHHGGGGG---STTEEEEECCCCSHHHHHSSCHHHHHHHHHHHHCC
T ss_pred ---------------------------------HHHHHHHhh---cCCEEEEecccccccccccccCHHHHHHHHHHHcC
Confidence 223333333 3689999998 89999999999999999
Q ss_pred CCEEEEEcCCcccCccchHHHHHHHHhcC-CceeeeEEeee--cCCCceeccccccccccccccccccccCCcCcCCCCC
Q psy1765 204 GKVLVFLDSHIEVNTHWLEPLLVPIAERT-NTVTVPIIDII--NADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSE 280 (867)
Q Consensus 204 Gd~llfLDaD~~v~p~wLe~Ll~~l~~~~-~~vv~p~i~~i--~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~ 280 (867)
||||+|||+|+.+.|+||+.+++.+.+++ .++|++....+ +......... . . +.....
T Consensus 89 g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~------~--------~--~~~~~~--- 149 (255)
T 1qg8_A 89 GEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIVKET------V--------R--PAAQVT--- 149 (255)
T ss_dssp CSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC---CEEEEE------E--------E--CCCSCB---
T ss_pred CCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCCCcchhhc------c--------C--chHHHH---
Confidence 99999999999999999999999999874 46677665544 3321111000 0 0 000000
Q ss_pred CCCCcccccccccceEeEeHHHHHHhC-CC------CCCCCCCcccchHHHHHHHHcCCeEEEEcccEEEEEec
Q psy1765 281 DFIKPILSPTMAGGLFAIDRQYFDSLG-QY------DAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGHVFR 347 (867)
Q Consensus 281 ~~~~p~~~~~~~G~~~airR~~f~~vG-gf------De~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V~H~~r 347 (867)
......+.|++++++|++|+++| +| |+.+ +++||+||++|+...| ++.++|...+.|..+
T Consensus 150 ----~~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~--~~~eD~~~~~r~~~~g-~~~~~~~~~~~~r~~ 216 (255)
T 1qg8_A 150 ----WNAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAF--YRIGDARFFWRVNHFY-PFYPLDEELDLNYIT 216 (255)
T ss_dssp ----SCCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGG--STTHHHHHHHHHTTTC-CBEEEEEEEEEEEEC
T ss_pred ----HhhcCCCccceEEEEHHHHHhhcccccccccCCccc--chHHHHHHHHHHHHhC-CEEEecCcEEEEEEc
Confidence 01234566788999999999999 89 6655 3489999999999986 699999988877653
|
| >1vcl_A Hemolytic lectin CEL-III; hemolysis, hemagglutination, pore-forming, calcium, toxin; HET: BTB; 1.70A {Cucumaria echinata} SCOP: b.42.2.1 b.42.2.1 d.281.1.1 PDB: 2z48_A* 2z49_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=9.6e-27 Score=261.97 Aligned_cols=251 Identities=16% Similarity=0.195 Sum_probs=182.5
Q ss_pred ceeeeecCCCceecccCCCCCCCcEEEEecCCCCCCceeeecCCCceEE-eeceeeecCCCc---cEEEeCCCCC---CC
Q psy1765 547 HFHIRLSSTDLCLTSKVDKTKGSPLVLKKCDELSKTQHWSKTDKSELVL-AELLCLDAGATK---PKLTKCHEMG---GS 619 (867)
Q Consensus 547 ~g~ir~~~~~~CLD~~~~~~~g~~v~l~~C~~~~~~Q~w~~t~~~~i~~-~~~~CLd~~g~~---v~l~~C~~~~---~~ 619 (867)
-++|++..+|+|||+.++... +.|++|+|++. .+|+|++..+|.|+. .+++|||+.++. +..+.|.-.. ..
T Consensus 10 ~~~i~~~~sG~cLDV~g~~~~-a~Vql~~cn~s-~~Q~W~~~~dGtIrn~~sg~CLd~~g~gtanv~~s~~~~yP~vp~~ 87 (432)
T 1vcl_A 10 IGELRSFKSKQCVDIVGNQGS-GNIATYDCDGL-SDQQIIICGDGTIRNEARNYCFTPDGSGNANVMSSPCTLYPEIPSS 87 (432)
T ss_dssp EECEEETTTCCEEEESSSSSC-EEEEEECCCCC-GGGSEEEETTSCEEESSSSEEEEESSSSSEEEEEEECCCSSSCCGG
T ss_pred CEEEEECCCCcEEecCCCCcc-ceEEEECCCCC-ccceEEEecCCcEEeCCCCceEecCCCCccccccceeeEccCCCcC
Confidence 357788899999999986555 77999999875 599999999999984 568999998643 3455554321 22
Q ss_pred cceeeee------e---eccceeeecccCcccccCCChhh-hhhhhhccccCCCCCccccccccc-ccceEEEecCCCce
Q psy1765 620 QEYWCWL------R---CKSFKWYLDNVYPEMILPSDDED-RLKKKWAQVEQPKFQPWYSRARNY-TSHFHIRLSGTDLC 688 (867)
Q Consensus 620 Q~~w~~~------~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~q~W~~~~~~~-~~~~~i~~~~sg~C 688 (867)
+.| .+- . -..|...+.|..+..+++..... ..............|.|.+....- ...+.|++..+++|
T Consensus 88 ~~~-~~G~~~~~~~~~g~~~g~y~I~N~~SG~CLDv~g~~~Ga~V~l~~C~g~~nQ~W~lt~~g~g~~~G~Irn~~sg~C 166 (432)
T 1vcl_A 88 QRW-RQGRRKTFTDNGGIEQVATEIINLASGKCLDIEGSDGTGDIGVYDCQNLDDQYFYVRSRGPELFYGRLRNEKSDLC 166 (432)
T ss_dssp GCE-EEEEEEEEECTTSCEEEEEEEEETTTCCEEEESSSSSCSBEEEECCCCCGGGCEEECCCCCEEEEEEEEETTTCCE
T ss_pred cee-ecccceeeeecCCCcccceEEEECCCCceeeecCCCCCCeEEEEeCCCCCccceeeecCCCCccceEEEECCCCcE
Confidence 222 211 0 00124456676666666544111 112222233344789998865210 01468999999999
Q ss_pred EeecCCCCCCCceEEecCCCCCCCccEEEccCCcEEe-ccCceeeeCC----CCcEEEecCCCCCCCeEEEecC----Ce
Q psy1765 689 LTSKVDKTKGSPLVLKKCDELSKTQRWSKTDKSELVL-AELLCLDAGA----TKPKLTKCHEMGGSQEWNFVLR----DK 759 (867)
Q Consensus 689 Ld~~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~~~~~~-~s~~CLD~~g----~~v~~~~C~~~~~~Q~W~~~~~----~~ 759 (867)
||+.+... |+.|.+++|++ ..+|+|.+...+.++. .+++|||+.+ +.|++|+|++. .+|+|.+... +.
T Consensus 167 LDv~g~s~-Ga~V~l~~C~g-~~nQ~W~~~~~G~I~n~~Sg~CLDv~g~st~a~V~l~~C~g~-~nQ~W~~~~~~~~Gg~ 243 (432)
T 1vcl_A 167 LDVEGSDG-KGNVLMYSCED-NLDQWFRYYENGEIVNAKSGMCLDVEGSDGSGNVGIYRCDDL-RDQMWSRPNAYCNGDY 243 (432)
T ss_dssp EEESSSSS-CEEEEEECCCS-CGGGCEEEETTSCEEETTTCCEEEESSSSSCSBEEEECCCCC-GGGCEECCGGGCBTTE
T ss_pred EEecCCCC-CCeEEEEecCC-CCCeeEEEeCCCCEEeCCCCeEEEeCCCCCCCeEEEEecCCC-CccEEEEecccCCCCe
Confidence 99954333 78999999999 8899999998887764 4799999975 48999999984 5999999865 23
Q ss_pred eeeecCCCCceeecCCCCCCCeEEEEecCCCCCceEEEecCCcc
Q psy1765 760 TPIYSPATGTCLGSKNRLENTVIVMEMCAQHKDTSWDLVPVGSL 803 (867)
Q Consensus 760 ~~i~n~~sg~CLd~~~~~~g~~v~~~~C~~~~~Q~W~~~~~~~~ 803 (867)
..|+|+.||+|||+.+.++.+.|++|+|+++++|+|.|++....
T Consensus 244 ~~I~n~~SGkCLDv~g~st~~~V~~~~C~g~~nQ~W~~~~~~~~ 287 (432)
T 1vcl_A 244 CSFLNKESNKCLDVSGDQGTGDVGTWQCDGLPDQRFKWVFDDWE 287 (432)
T ss_dssp ECCEETTTCCEEEESSSSSCSBEEEECCCCCGGGCEEEECCCBC
T ss_pred EEEEECCCCCeEecCCCCCCceEEEEccCCCccceEEEEeCCCc
Confidence 35999999999999887666899999999999999999887663
|
| >2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.4e-24 Score=260.18 Aligned_cols=200 Identities=16% Similarity=0.193 Sum_probs=155.8
Q ss_pred CCCCcEEEEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhH
Q psy1765 49 STLPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLI 128 (867)
Q Consensus 49 ~~~P~vSVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 128 (867)
..+|+||||||+||++. .|.+||+||++|+++++ |||||||||+|++
T Consensus 372 ~~~~~vsiii~~yn~~~-~l~~~l~s~~~q~~~~~--eiivvdd~S~d~t------------------------------ 418 (625)
T 2z86_A 372 KRVPLVSIYIPAYNCSK-YIVRCVESALNQTITDL--EVCICDDGSTDDT------------------------------ 418 (625)
T ss_dssp CSSCSEEEEEEESSCTT-THHHHHHHHHSSSCCSE--EEEEEEESCSSSH------------------------------
T ss_pred ccCCeEEEEEeCCCCHH-HHHHHHHHHHhCcCCCe--EEEEEECcCChhH------------------------------
Confidence 34789999999999865 99999999999999998 9999999999883
Q ss_pred HHhhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhcCCCEEE
Q psy1765 129 RARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLV 208 (867)
Q Consensus 129 ~a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A~Gd~ll 208 (867)
.+.+.++.+.. ++|++++ ++|.|++.|+|.|++.|+||||+
T Consensus 419 ------------------------------------~~~~~~~~~~~--~~i~~~~-~~n~G~~~a~n~g~~~a~g~~i~ 459 (625)
T 2z86_A 419 ------------------------------------LRILQEHYANH--PRVRFIS-QKNKGIGSASNTAVRLCRGFYIG 459 (625)
T ss_dssp ------------------------------------HHHHHHHHTTC--TTEEEEE-ECCCCHHHHHHHHHHHCCSSEEE
T ss_pred ------------------------------------HHHHHHHHhhC--CcEEEEe-CCCCCHHHHHHHHHHhcCCCEEE
Confidence 34455555544 6899997 56999999999999999999999
Q ss_pred EEcCCcccCccchHHHHHHHHhcCC-ceeeeEEeeecCCCceeccccccccccccccccccccCCcCcCCCCCCCCCccc
Q psy1765 209 FLDSHIEVNTHWLEPLLVPIAERTN-TVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPIL 287 (867)
Q Consensus 209 fLDaD~~v~p~wLe~Ll~~l~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~ 287 (867)
|||+|+.+.|+||+.+++.+.+++. ++|++....++.+.... ..++.+. .... ..+.
T Consensus 460 ~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~------~~~~~~~------~~~~----------~~~~ 517 (625)
T 2z86_A 460 QLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREGNLI------SNGYNWP------IYSR----------EKLT 517 (625)
T ss_dssp ECCTTCEECTTHHHHHHHHHHHCTTCSEEEEEEEEECTTSCEE------EECCCCS------SCCH----------HHHT
T ss_pred EECCCcccChhHHHHHHHHHHhCCCeeEEEeeeEEECCCCCEe------ccCcccc------cCCH----------HHHh
Confidence 9999999999999999999987654 56666554444332111 0111111 0000 0112
Q ss_pred ccccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEcccEEEEE
Q psy1765 288 SPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGHV 345 (867)
Q Consensus 288 ~~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V~H~ 345 (867)
...+.|++++++|++|+++||||+.+.. +||+||++|+.++| ++.++|...+.|.
T Consensus 518 ~~~~~~~~~~~~r~~~~~~ggfd~~~~~--~eD~dl~~r~~~~g-~~~~~~~~~~~~r 572 (625)
T 2z86_A 518 SAMICHHFRMFTARAWNLTEGFNESISN--AVDYDMYLKLSEVG-PFKHINKICYNRV 572 (625)
T ss_dssp TSCCCCSCEEEEHHHHTTTTCCCSSCSS--CHHHHHHHHHTTTS-CEEEEEEEEEEEE
T ss_pred hcccCCceEEEEHHHHHHhCCCCCccCC--hHHHHHHHHHHHhC-CEEEeCCcEEEEE
Confidence 3456678899999999999999999873 79999999999999 9999998765543
|
| >2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=9.1e-24 Score=223.87 Aligned_cols=139 Identities=11% Similarity=0.030 Sum_probs=97.3
Q ss_pred CchhHHhHhhhhcCCCEEEEEcCCcccCccchHHHHHHHHh----cCC-ceeeeEEeeecCCCceecccccccccccccc
Q psy1765 190 GLIRARMFGAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAE----RTN-TVTVPIIDIINADTFQYTSSALVRGGFNWGL 264 (867)
Q Consensus 190 G~a~ArN~G~~~A~Gd~llfLDaD~~v~p~wLe~Ll~~l~~----~~~-~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l 264 (867)
|+++|+|.|++.|+||||+|||+|++++++||+.|++.+++ ++. +++++.....+... ... ......+.
T Consensus 61 g~a~a~N~Gi~~A~g~yl~fln~D~~~~~~~l~~l~~~~~~~~~~~~~vg~vg~~~~~~~~~g----~~~-~~~~~~~~- 134 (249)
T 2nxv_A 61 HGFSWHKQMLPRCKGRYVIFCHEDVELVDRGYDDLVAAIEALEEADPKWLVAGVAGSPWRPLN----HSV-TAQALHIS- 134 (249)
T ss_dssp CTTTHHHHHGGGCCSSEEEEEETTEECSSCCHHHHHHHHHHHHHHCTTEEEEESEEEESSCSC----TTS-CCCEEEEE-
T ss_pred cHHHHHHHHHHhcCCCEEEEECCCcccCccHHHHHHHHHHhcccCCCCeeEEeecccccCCCC----cee-eecccccC-
Confidence 66899999999999999999999999999999999999987 254 55655433222110 000 00000000
Q ss_pred ccccccCCcCcCCCCCCCCCcccccccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEcccEEEE
Q psy1765 265 HFKWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGH 344 (867)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V~H 344 (867)
..+.. ..... ..+..++.+.|+||++||++ +|||||.+..|..||+|||+|++++|+++.++|. .|.|
T Consensus 135 -~~~~~--~~~~~-----~~~~~v~~~~g~~~~~rr~~---~~gFDe~~~~~~~~D~Dl~~R~~~~G~~~~~~p~-~v~H 202 (249)
T 2nxv_A 135 -DVFGN--DRRRG-----NVPCRVESLDECFLLMRRLK---PVLNSYDMQGFHYYGADLCLQAEFLGGRAYAIDF-HLHH 202 (249)
T ss_dssp -ETTEE--EEEES-----CSSEEEEEECTTEEEEETTB---CCCCCSSCCSSSSHHHHHHHHHHHTTCEEEECCC-CCEE
T ss_pred -Ccccc--ccccC-----CCceEcCeeeeEeeEEEHhh---hCCCCCCCCCcceehhHHHHHHHHcCCeEEEecc-EEEE
Confidence 00000 00000 23445678899999999999 7899998766667999999999999999999985 4888
Q ss_pred Ee
Q psy1765 345 VF 346 (867)
Q Consensus 345 ~~ 346 (867)
..
T Consensus 203 ~~ 204 (249)
T 2nxv_A 203 YG 204 (249)
T ss_dssp CC
T ss_pred CC
Confidence 65
|
| >3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2.4e-25 Score=271.32 Aligned_cols=205 Identities=13% Similarity=0.164 Sum_probs=0.0
Q ss_pred CCcEEEEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHHH
Q psy1765 51 LPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRA 130 (867)
Q Consensus 51 ~P~vSVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~a 130 (867)
||+||||||+||++. .|.+||+||++|+++++ |||||||||+|++
T Consensus 1 Mp~vSVIIp~yN~~~-~L~~~L~Sll~Qt~~~~--EIIVVDDgStD~t-------------------------------- 45 (729)
T 3l7i_A 1 MNKLTIIVTYYNAEE-YITGCLESIKQQRTQDF--NLIIVNDGSTDQS-------------------------------- 45 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CceEEEEEEcCCCHH-HHHHHHHHHHhCCCCCe--EEEEEECCCCCcH--------------------------------
Confidence 789999999999775 99999999999999998 9999999999983
Q ss_pred hhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhcCCCEEEEE
Q psy1765 131 RMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLVFL 210 (867)
Q Consensus 131 ~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A~Gd~llfL 210 (867)
.+.+.++.+.. +++|+++++++|.|+++|+|.|++.|+||||+||
T Consensus 46 ----------------------------------~~il~~~~~~~-~~~i~~i~~~~n~G~~~arN~gi~~A~gdyI~fl 90 (729)
T 3l7i_A 46 ----------------------------------KKLMDEAIKDY-DKNIRFIDLDENSGHAHARNIALEEVETPYFMFL 90 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----------------------------------HHHHHHHHHhC-CCCEEEEECCCCCCHHHHHHHHHHhccCCEEEEE
Confidence 23445554443 3589999999999999999999999999999999
Q ss_pred cCCcccCccchHHHHHHHHhcCCceeeeEEeeecCCCceeccccccccccccccccccccCCcCcCCCCCCCCCcccccc
Q psy1765 211 DSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPT 290 (867)
Q Consensus 211 DaD~~v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~ 290 (867)
|+|+.+.|+||+.+++.+. +...++++... +....-..... ... ...+. ... ..... ....
T Consensus 91 D~Dd~~~p~~l~~l~~~l~-~~d~v~~~~~~-~~~~~~~~~~~----~~~----~~~~~--~~~-----~~~~~--~~~~ 151 (729)
T 3l7i_A 91 DADDELASYAITFYLEKFN-NTDGLIAPIHS-FTTQRPQFVDL----DRV----RVEYF--NAK-----ENINS--FLRK 151 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCCChhHHHHHHHHhc-CCCEEEEeeEE-eecCCCccccc----cce----eeeee--cch-----hhHHH--Hhhc
Confidence 9999999999999999998 44444443321 11111000000 000 00000 000 00000 1113
Q ss_pred cccceEeEeHHHHHHhC-CCCCCCCCCcccchHHHHHHHHcCCeEEEEcccEEEEEe
Q psy1765 291 MAGGLFAIDRQYFDSLG-QYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGHVF 346 (867)
Q Consensus 291 ~~G~~~airR~~f~~vG-gfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V~H~~ 346 (867)
..++++++||++|+++| +|||++.. +||+||++|+...|+++.++|...++|..
T Consensus 152 ~~~~~~~~rr~~l~~~gl~fde~~~~--~ED~d~~~rl~~~g~~i~~~~~~~~~~yr 206 (729)
T 3l7i_A 152 QSACNIIFRTAIVRAHHIRFNENLNT--YVDWSFVLEYMKYVNKFVRIFNFPFYFRG 206 (729)
T ss_dssp ---------------------------------------------------------
T ss_pred cchhheeeeHHHHHHcCCCcCCCCCc--ccCHHHHHHHHHhcCCEEEecCcEEEEEE
Confidence 45677899999999999 99999853 79999999999999999999555666644
|
| >4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.89 E-value=3e-23 Score=254.45 Aligned_cols=260 Identities=15% Similarity=0.146 Sum_probs=168.0
Q ss_pred CCCCCcEEEEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhh
Q psy1765 48 PSTLPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGL 127 (867)
Q Consensus 48 ~~~~P~vSVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi 127 (867)
++..|+||||||+|||+...+.+||+|+++|+|++-..|||||||||+|++. +. .| ..+
T Consensus 136 ~~~~P~VSViIPtyNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~---~~-------~d-----------~~i 194 (802)
T 4hg6_A 136 PEELPTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRC---MS-------PD-----------PEL 194 (802)
T ss_dssp TTTCCCEEEEEECTTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHH---TC-------SS-----------HHH
T ss_pred ccCCCcEEEEEEECCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCcccc---cc-------CC-----------HHH
Confidence 4567999999999999885669999999999999732399999999999830 00 00 000
Q ss_pred HHHhhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCC-cCchhHHhHhhhhcCCCE
Q psy1765 128 IRARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKR-EGLIRARMFGAKYATGKV 206 (867)
Q Consensus 128 ~~a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n-~G~a~ArN~G~~~A~Gd~ 206 (867)
.+.- + ...+.+.++.++. +++++..++| .|+++|+|.|++.|+|||
T Consensus 195 ~~~~------~------------------------~~~~~l~~~~~~~---~v~~i~~~~~~~GKa~alN~gl~~a~gd~ 241 (802)
T 4hg6_A 195 AQKA------Q------------------------ERRRELQQLCREL---GVVYSTRERNEHAKAGNMSAALERLKGEL 241 (802)
T ss_dssp HHHH------H------------------------HHHHHHHHHHHHH---TCEEEECSSCCSHHHHHHHHHHHHCCCSE
T ss_pred HHHH------H------------------------hhhHHHHHHHHhc---CcEEEEecCCCCcchHHHHHHHHhcCCCE
Confidence 0000 0 0022344444443 6777776665 789999999999999999
Q ss_pred EEEEcCCcccCccchHHHHHHHHhcCC-ceeeeEEeeecCCCceeccccccccccccccccccccCCcCcCCCCCCCCCc
Q psy1765 207 LVFLDSHIEVNTHWLEPLLVPIAERTN-TVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKP 285 (867)
Q Consensus 207 llfLDaD~~v~p~wLe~Ll~~l~~~~~-~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p 285 (867)
|+|+|+|+.++|+||+.+++.+.+++. ++|++.....+.+.+.................+... .. ....
T Consensus 242 Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------~~~~ 311 (802)
T 4hg6_A 242 VVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDPIQRNLALGDRCPPENEMFYGKI---HR-------GLDR 311 (802)
T ss_dssp EEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSCCHHHHHHTCCTTSCCTTHHHHHTH---HH-------HHHH
T ss_pred EEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCCchHhhhhhHHhhhhHHHHHHHHHH---Hh-------hHhh
Confidence 999999999999999999999977664 555544333332211100000000000000000000 00 0001
Q ss_pred ccccccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEcccEEEEEeccCCCCCCCCCCchhhhhh
Q psy1765 286 ILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGHVFRSRRPYNNGHNEDPLTRNS 365 (867)
Q Consensus 286 ~~~~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V~H~~r~~~~y~~~~~~~~~~rN~ 365 (867)
...+.+.|+++++||++|+++||||+... +||.|+++|+.+.|+++.++|.+.++|.. |......
T Consensus 312 ~~~~~~~G~~~~~Rr~al~~vGgf~~~~~---~ED~~l~~rl~~~G~ri~~~~~~~~~~~~--------p~t~~~~---- 376 (802)
T 4hg6_A 312 WGGAFFCGSAAVLRRRALDEAGGFAGETI---TEDAETALEIHSRGWKSLYIDRAMIAGLQ--------PETFASF---- 376 (802)
T ss_dssp TTCCCCCSSSEEEEHHHHHHHTTCCCSSS---SHHHHHHHHHHTTTCCEEECCCCCEEECC--------CCSHHHH----
T ss_pred cCCceecccchhhhHHHHHHcCCcCCCCc---chHHHHHHHHHHcCCeEEEecCCEEEecC--------CCCHHHH----
Confidence 12245678999999999999999998764 69999999999999999999999998853 2222222
Q ss_pred HHHHHhcHHHHHHHHhhcCCC
Q psy1765 366 LRVAHVWMDEYIEHFLKQRPE 386 (867)
Q Consensus 366 ~R~a~~w~d~~~~~~y~~~p~ 386 (867)
.+-...|.....+.+..+.|.
T Consensus 377 ~~Qr~RW~~G~~q~l~~~~pl 397 (802)
T 4hg6_A 377 IQQRGRWATGMMQMLLLKNPL 397 (802)
T ss_dssp HHHHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHccHHHHHHHhCcc
Confidence 333345655555555555553
|
| >2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ... | Back alignment and structure |
|---|
Probab=99.89 E-value=5.6e-23 Score=221.62 Aligned_cols=160 Identities=19% Similarity=0.178 Sum_probs=116.6
Q ss_pred CCCcEEEEEEeCCCChHHHHHHHHHHH---hcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchh
Q psy1765 50 TLPSTSVIICFYNEHPATLYRSVQTLL---SRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREG 126 (867)
Q Consensus 50 ~~P~vSVIIp~yNe~~~~l~~~l~Svl---~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g 126 (867)
..|+||||||+||++. .|.+||+||+ +|++.++ |||||||+ +|.
T Consensus 63 ~~~~VSIIIP~yN~~~-~L~~~L~sl~~~l~q~~~~~--EIiVVdds-~d~----------------------------- 109 (287)
T 2fy7_A 63 SPHKVAIIIPFRNRQE-HLKYWLYYLHPVLQRQQLDY--GIYVINQA-GDT----------------------------- 109 (287)
T ss_dssp CSCEEEEEEEESSCHH-HHHHHHHHHHHHHHHTTCEE--EEEEEEEC-SSS-----------------------------
T ss_pred cCCcEEEEEeeCCCHH-HHHHHHHHHHHHHHHhcCCc--eEEEEEeC-CCC-----------------------------
Confidence 4689999999999765 9999999999 7888888 99999983 332
Q ss_pred hHHHhhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhh----hhc
Q psy1765 127 LIRARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGA----KYA 202 (867)
Q Consensus 127 i~~a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~----~~A 202 (867)
.++.+.++|.|+ +.|
T Consensus 110 -------------------------------------------------------------~f~~a~a~N~G~~~al~~A 128 (287)
T 2fy7_A 110 -------------------------------------------------------------IFNRAKLLNVGFQEALKDY 128 (287)
T ss_dssp -------------------------------------------------------------CCCHHHHHHHHHHHHHHHS
T ss_pred -------------------------------------------------------------ccchhhhhhhHHHHHHHhC
Confidence 125678899999 899
Q ss_pred CCCEEEEEcCCcccCccchHHHHHHHHhcCCceeeeEEeeecCCCceeccccccccccccccccccccCCcCcCCCCCCC
Q psy1765 203 TGKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDF 282 (867)
Q Consensus 203 ~Gd~llfLDaD~~v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~ 282 (867)
+||||+|+|+|+++.++++. ..++ ....... ..... +.+
T Consensus 129 ~gd~i~flD~D~i~~~d~~~------------~~~~-------~~p~~~~--~~~~~------~~~-------------- 167 (287)
T 2fy7_A 129 DYTCFVFSDVDLIPMNDHNA------------YRCF-------SQPRHIS--VAMDK------FGF-------------- 167 (287)
T ss_dssp CCCEEEEECTTEEESBTTSC------------CSCC-------SSCEECC--CEEGG------GTT--------------
T ss_pred CCCEEEEECCCcccCCCcce------------EecC-------CCCceEE--Eeecc------ccc--------------
Confidence 99999999999999999721 0000 0000000 00000 000
Q ss_pred CCcccccccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEE-----EEcccEEEEEe
Q psy1765 283 IKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLA-----MIPCSRIGHVF 346 (867)
Q Consensus 283 ~~p~~~~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~-----~~P~s~V~H~~ 346 (867)
..+ ...+.|++++++|+.|+++|||||.|..||+||+||++|++++|+++. +.+.+.+.|..
T Consensus 168 ~~~--~~~~~G~~~~~rr~~f~~vgGFde~~~g~g~ED~Dl~~Rl~~~G~~i~~~~~~~~~~~~i~H~~ 234 (287)
T 2fy7_A 168 SLP--YVQYFGGVSALSKQQFLTINGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGTTRHIRHSR 234 (287)
T ss_dssp SCS--STTCCCSEEEEEHHHHHHTTSCCSCCSSCSCHHHHHHHHHHHTTCCCBCCCTTTCEEEECC---
T ss_pred CCC--cCceeeeEEEEEHHHHHHcCCCCccccccccchHHHHHHHHHcCCeEEecCcccceeEEEecCC
Confidence 001 135668999999999999999999999999999999999999999998 44455555544
|
| >2dry_A 29-kDa galactose-binding lectin; earthworm lumbricus terrestris, sialic acid, in vitro evolution, beta-trefoil fold, sugar binding protein; HET: PGE; 1.80A {Lumbricus terrestris} PDB: 2drz_A* 2ds0_A* 2zqn_A* 2zqo_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=2.8e-22 Score=190.52 Aligned_cols=120 Identities=11% Similarity=0.054 Sum_probs=105.4
Q ss_pred eEEEecCCCceEee-cCCCCCCCceEEecCCCC--CCCccEEEccCCcEEe-ccCceeeeCCCCcEEEecCCCCCCCeEE
Q psy1765 678 FHIRLSGTDLCLTS-KVDKTKGSPLVLKKCDEL--SKTQRWSKTDKSELVL-AELLCLDAGATKPKLTKCHEMGGSQEWN 753 (867)
Q Consensus 678 ~~i~~~~sg~CLd~-~~~~~~g~~v~l~~C~~~--~~~Q~W~~~~~~~~~~-~s~~CLD~~g~~v~~~~C~~~~~~Q~W~ 753 (867)
+.|++..||+|||+ +.+..+|++|++++|++. ..+|+|.++..+.++. .+++|||+.|+.|++|+|+++. +|+|.
T Consensus 4 y~i~n~~SGk~LDV~g~s~~~Ga~v~~w~~~~~~~~~nQ~W~~~~~g~i~~~~sg~cLD~~G~~v~~~~c~g~~-~Qqw~ 82 (130)
T 2dry_A 4 FYIKSELNGKVLDIGGQNPAPGSKIITWDQKKGPTAVNQLWYTDQQGVIRSKLNDFAIDASHEQIETQPFDPNN-PKRAW 82 (130)
T ss_dssp EEEEETTTSCEEEEGGGCCSTTCBEEEECCCCSGGGGGGCEEECTTCCEEETTTCCEEECSSSSCEEECCCTTC-GGGCE
T ss_pred EEEEECCCCCEEEECCCCcCCCceEEEEEecCCCCchheEEEEecceeEEEccCCeeEEecCCceEEEecCCCc-ceeEE
Confidence 68999999999999 556778999999999974 2579999999888875 4799999999999999999864 99999
Q ss_pred EecCCeeeeecCCCCceeecCCCCC--CCeEEEEecCCCCCceEEEec
Q psy1765 754 FVLRDKTPIYSPATGTCLGSKNRLE--NTVIVMEMCAQHKDTSWDLVP 799 (867)
Q Consensus 754 ~~~~~~~~i~n~~sg~CLd~~~~~~--g~~v~~~~C~~~~~Q~W~~~~ 799 (867)
+..++.+ +.++.|++|||+.+.++ |+.|++|+|+++++|+|.|++
T Consensus 83 ~~~~g~~-~~~~~sg~cLDv~g~st~~G~~v~~w~~~g~~nQ~W~~es 129 (130)
T 2dry_A 83 IVSGNTI-AQLSDRDNVLGVIKSDKGASAHICAWKQHGGPNQKFIIES 129 (130)
T ss_dssp EEETTEE-EETTEEEEEEEEECCSSSSCCEEEEEECCCSGGGCEEEEE
T ss_pred EeCCCcE-EEecccCceEEccCCCCCCCCEEEEECCCCCccceEEEEe
Confidence 9988875 66788999999987655 899999999999999999974
|
| >3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A | Back alignment and structure |
|---|
Probab=99.87 E-value=6.6e-22 Score=218.27 Aligned_cols=212 Identities=16% Similarity=0.099 Sum_probs=137.3
Q ss_pred CCCCcEEEEEEeCCCChHHHHHHHHHHHhcCccc-cccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhh
Q psy1765 49 STLPSTSVIICFYNEHPATLYRSVQTLLSRTGQS-LLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGL 127 (867)
Q Consensus 49 ~~~P~vSVIIp~yNe~~~~l~~~l~Svl~qt~~~-~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi 127 (867)
...|+||||||+||++. .|.+||+||++|+++. + |||||||||+|++
T Consensus 45 ~~~~~vSViIp~yN~~~-~l~~~l~sl~~q~~~~~~--eiivVDdgS~D~t----------------------------- 92 (329)
T 3ckj_A 45 KAGRTISVVLPALDEED-TIGSVIDSISPLVDGLVD--ELIVLDSGSTDDT----------------------------- 92 (329)
T ss_dssp TTTCCEEEEEEESSCTT-THHHHHHHHGGGBTTTBS--EEEEEECSCCSSH-----------------------------
T ss_pred ccCCcEEEEEeeCCCHH-HHHHHHHHHHHhhCCCCc--EEEEEeCCCCchH-----------------------------
Confidence 35689999999999776 9999999999999874 6 9999999999983
Q ss_pred HHHhhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEE-cCCCcCchhHHhHhhhhcCCCE
Q psy1765 128 IRARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYR-TSKREGLIRARMFGAKYATGKV 206 (867)
Q Consensus 128 ~~a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~-~~~n~G~a~ArN~G~~~A~Gd~ 206 (867)
.+.+.++.... ..+++++. .++|.|++.|+|.|++.|+|||
T Consensus 93 -------------------------------------~~~~~~~~~~~-~~~~~~~~~~~~n~G~~~a~n~g~~~a~gd~ 134 (329)
T 3ckj_A 93 -------------------------------------EIRAVAAGARV-VSREQALPEVPIRPGKGEALWRSLAASRGDI 134 (329)
T ss_dssp -------------------------------------HHHHHHTTCEE-EEHHHHCTTSCCCCSHHHHHHHHHHHCCCSE
T ss_pred -------------------------------------HHHHHHhhhhh-ccceeeeccCCCCCCHHHHHHHHHHhCCCCE
Confidence 12222221110 01222332 6789999999999999999999
Q ss_pred EEEEcCCcc-cCccchHHHHHHHHhcC-CceeeeEEeeecC-CCceeccccccccccccccccccccCCcCcCCCCCCCC
Q psy1765 207 LVFLDSHIE-VNTHWLEPLLVPIAERT-NTVTVPIIDIINA-DTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFI 283 (867)
Q Consensus 207 llfLDaD~~-v~p~wLe~Ll~~l~~~~-~~vv~p~i~~i~~-~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~ 283 (867)
|+|||+|+. +.|+||+.+++.+.+++ .++|++....... +........ ..++.......... ......
T Consensus 135 i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~------ 205 (329)
T 3ckj_A 135 VVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKSFYRRPLNVGDAGGGAGA-TGGGRVTELVARPL--LAALRP------ 205 (329)
T ss_dssp EEECCTTEESCCTTHHHHHHHHHHSCSSCCEEEEEEECC----------------CHHHHHTHHHH--HHHHCG------
T ss_pred EEEECCCCCCcChHHHHHHHHHHHhCCCccEEEEEecccccCCcccccccc-cCCCceehhhHHHH--HHHhhh------
Confidence 999999999 89999999999977654 4666665433221 100000000 00000000000000 000000
Q ss_pred CcccccccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHH-cCCe-EEEEcccEEEE
Q psy1765 284 KPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWM-CGGS-LAMIPCSRIGH 344 (867)
Q Consensus 284 ~p~~~~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~-~G~~-i~~~P~s~V~H 344 (867)
.........|+++++||++|+++| |++++ +||+|+++|+.+ .|+. |..+|.....|
T Consensus 206 ~~~~~~~~~~g~~~~rr~~l~~i~-f~~~~----~~D~~l~~r~~~~~g~~~i~~v~~~~r~h 263 (329)
T 3ckj_A 206 ELGCILQPLGGEYAATRELLTSVP-FAPGY----GVEIGLLVDTFDRLGLDAIAQVNLGVREH 263 (329)
T ss_dssp GGGGCSCTTCSCEEEEHHHHTTSC-BCCGG----GHHHHHHHHHHHHHCGGGEEEEEEEECEE
T ss_pred hhccccCCCccceeeeHHHHHhCC-CCCCC----cccHHHHHHHHHhcCCccEeeecceEEec
Confidence 000122345678899999999998 88754 599999999987 6764 87777554444
|
| >3aj6_A Main hemagglutinin component; toxin, beta-trefoil; HET: NGA; 1.48A {Clostridium botulinum} PDB: 1qxm_A 3aj5_A* 2ehm_A* 2ehi_A* 2ehn_A* 3ah1_A* 3ah2_A* 3ah4_A* 2e4m_A | Back alignment and structure |
|---|
Probab=99.86 E-value=1.2e-21 Score=210.33 Aligned_cols=237 Identities=16% Similarity=0.150 Sum_probs=173.0
Q ss_pred eeec-CCCceecccCCCCCCCcEEEEecCCCCCCceeeecCC---Cc--eEE--eeceeeecC--CCccEEEeCCCCCCC
Q psy1765 550 IRLS-STDLCLTSKVDKTKGSPLVLKKCDELSKTQHWSKTDK---SE--LVL--AELLCLDAG--ATKPKLTKCHEMGGS 619 (867)
Q Consensus 550 ir~~-~~~~CLD~~~~~~~g~~v~l~~C~~~~~~Q~w~~t~~---~~--i~~--~~~~CLd~~--g~~v~l~~C~~~~~~ 619 (867)
|+.. .+++.||.. .++.|.+|+|++. .+|+|.|..+ +. |+. .++++|+.. ++.|..+.|++...
T Consensus 17 I~s~~~~n~vl~~~----~~~~v~~~~~~~~-~~Q~W~~~yd~~~g~Y~I~n~~~~~lvL~~~~~~~~V~~~~~~g~~~- 90 (286)
T 3aj6_A 17 ISPSNNTNKVLDKI----SQSEVKLWNKLSG-ANQKWRLIYDTNKQAYKIKVMDNTSLILTWNAPLSSVSVKTDTNGDN- 90 (286)
T ss_dssp EEETTCTTEEEEEC----SSSCEEEEECCCC-GGGCEEEEEETTTTEEEEEESSSSCCEEEECTTSSCEEEECCCCCGG-
T ss_pred EEEcCCCceEEecc----CCCcEEEecCCCC-cCCeEEEEEcCCCCeEEEEECCCCcEEEEccCCCCCEEEeCCCCCcc-
Confidence 4433 478899974 3789999999975 5999998743 32 332 346777764 45689999987544
Q ss_pred cceeeeeeec-cceeeeccc-CcccccCCChhhhhhhhhccccCCCCCccccccccc----ccceEEEec-CCCceEeec
Q psy1765 620 QEYWCWLRCK-SFKWYLDNV-YPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNY----TSHFHIRLS-GTDLCLTSK 692 (867)
Q Consensus 620 Q~~w~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~~~~----~~~~~i~~~-~sg~CLd~~ 692 (867)
|. |.+.+.. +|.+++.+. .+..+++..... ............|+|.+..-.. ...+.|++. .+++|||+.
T Consensus 91 Q~-W~l~~~~~dG~y~i~n~~~s~~vLdv~~gs--~v~~~~~~g~~~Q~w~i~~~~~~~i~dG~Y~i~~~~~sgk~lDv~ 167 (286)
T 3aj6_A 91 QY-WYLLQNYISRNVIIRNYMNPNLVLQYNIDD--TLMVSTQTSSSNQFFKFSNCIYEALNNRNCKLQTQLNSDRFLSKN 167 (286)
T ss_dssp GC-EEEEECTTTCCEEEEESSCTTEEEEECTTS--CEEEEECCSCGGGCEEEEEHHHHHHTTEEEEEEETTCTTCEEEEC
T ss_pred eE-EEEEEeCCCCEEEEEECCCCceEEEecCCC--eEEEEecCCCCceeEEEeccccccCCCceEEEEecCCCceEEEec
Confidence 44 7888774 899999885 555544443222 2333344457789999765111 123578886 567999993
Q ss_pred CCCCCCCceEEecCCCCCCCccEEEccCC---cEE---eccCceeeeC---CCCcEEEecCCCCCCCeEEEec----CCe
Q psy1765 693 VDKTKGSPLVLKKCDELSKTQRWSKTDKS---ELV---LAELLCLDAG---ATKPKLTKCHEMGGSQEWNFVL----RDK 759 (867)
Q Consensus 693 ~~~~~g~~v~l~~C~~~~~~Q~W~~~~~~---~~~---~~s~~CLD~~---g~~v~~~~C~~~~~~Q~W~~~~----~~~ 759 (867)
.+|+.|++++|++ ..+|+|+|+..+ ... ..+++|||.. |+.|++|+|+++. +|+|.+.. +|.
T Consensus 168 ---~~g~~V~~w~~~g-~~nQ~W~~~~~~~~~~y~i~~~~s~~~l~~~s~~g~~v~~~~~~g~~-~Q~W~~~~~~~~~G~ 242 (286)
T 3aj6_A 168 ---LNSQIIVLWQWID-SSRQKWIIEYNETKSAYTLKCQENNRYLTWIQNSNNYVETYQSTDSL-IQYWNINYLDNDASK 242 (286)
T ss_dssp ---TTSSBEEEECCCC-CGGGCEEEEEETTTTEEEEEETTTCCEEEECCSTTCBEEEECCCSSG-GGCEEEEEETTEEEE
T ss_pred ---CCCceEEEeCCCC-CccceEEEEECCCCCeEEEEECCCCEEEeccCCCCCEEEEEeCCCCc-ccEEEEEeccCCCCE
Confidence 2688999999999 889999997432 222 4468999964 6799999999854 99999943 566
Q ss_pred eeeecCC-CCceeecCCCCC--CCeEEEEecCCCCCceEEEecC
Q psy1765 760 TPIYSPA-TGTCLGSKNRLE--NTVIVMEMCAQHKDTSWDLVPV 800 (867)
Q Consensus 760 ~~i~n~~-sg~CLd~~~~~~--g~~v~~~~C~~~~~Q~W~~~~~ 800 (867)
++|+++. +++|||+.+.++ |+.|++|+|+++.+|+|.|+++
T Consensus 243 y~i~n~~~sgk~LDV~~~stanGt~v~~w~~~g~~nQ~W~~~~v 286 (286)
T 3aj6_A 243 YILYNLQDTNRVLDVYNSQIANGTHVIVDSYHGNTNQQWIINLI 286 (286)
T ss_dssp EEEEETTEEEEEEEEGGGCCSTTCBEEEEECCCCGGGCEEEEEC
T ss_pred EEEEECCCCCeEEEeCCCCCCCCCEEEEEcCCCCcccCEEEEeC
Confidence 6788886 899999987655 9999999999999999999864
|
| >2vse_A MTX holotoxin, mosquitocidal toxin; ADP-ribosyltransferase, lectin, ricin-B-like domain; 2.5A {Lysinibacillus sphaericus} PDB: 2vsa_A | Back alignment and structure |
|---|
Probab=99.85 E-value=5.4e-21 Score=229.81 Aligned_cols=249 Identities=13% Similarity=0.161 Sum_probs=175.9
Q ss_pred eeeeec-CCCceecccCCC-CCCCcEEEEecCCCCCCceeeecCC-------CceE---Eee-ceeeecCC-CccEEEeC
Q psy1765 548 FHIRLS-STDLCLTSKVDK-TKGSPLVLKKCDELSKTQHWSKTDK-------SELV---LAE-LLCLDAGA-TKPKLTKC 613 (867)
Q Consensus 548 g~ir~~-~~~~CLD~~~~~-~~g~~v~l~~C~~~~~~Q~w~~t~~-------~~i~---~~~-~~CLd~~g-~~v~l~~C 613 (867)
..|++. .+++|||+.++. ..|++|.+|+|++. .+|.|.++.. |..+ ..+ .+|||+.+ +.|++|.|
T Consensus 368 y~I~N~~~sglvLDv~~gstanGT~Vq~~~~ngs-~~Q~W~i~~~~~~pi~~GtY~Ivn~~sg~kvLDv~~~snV~~w~~ 446 (841)
T 2vse_A 368 YKFRNLSDPSKILDLKDGNTLNKTPLVVSSENSS-SSQEWLIEKTNYQTVKDGTYQVSSKLNENKVIEQISTNKVHIFSN 446 (841)
T ss_dssp EEEEESSCTTCEEEEGGGCCSTTCBEEEECCCSC-GGGCEEEEECCCCCSCSEEEEEEETTEEEEEEEEETTTEEEEEEC
T ss_pred EEEEecCCCceEEEeccCcCCCCCEEEEecCCCC-cccceecccccccccccceEEEEEccCCCEEEEecCCCCeEEecC
Confidence 357777 789999998765 47999999999974 5899999753 3322 223 48999874 35899999
Q ss_pred CCCCCCcceeeeeeecc-ceeeeccc-CcccccCCChhhhhhhhhccccCCCCCcccccccccccceEEEe-cCCCceEe
Q psy1765 614 HEMGGSQEYWCWLRCKS-FKWYLDNV-YPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRL-SGTDLCLT 690 (867)
Q Consensus 614 ~~~~~~Q~~w~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~~~~~~~~~i~~-~~sg~CLd 690 (867)
++. .+|+ |.+....+ |.+.+.++ .+..++...+.. ...........+.|.|.+.... .....|++ ..+++|||
T Consensus 447 ~g~-~nQq-W~~~~~g~~G~Y~I~n~~~sg~~Ldv~~~g-~~v~~~~~~g~~~QqW~l~~~g-dG~y~I~n~~~Sg~~LD 522 (841)
T 2vse_A 447 SDK-ENQV-WNLIYNPILKAYKIKSLKYPNYSLAWDSNN-TRTIVAATGDYNDQYWLIERNE-DNTYIIRNYENRKIVLD 522 (841)
T ss_dssp CCC-GGGC-EEEEEETTTTEEEEEESSCTTCEEEECTTT-TCBEEEECSCCGGGEEEEEECT-TSCEEEEESSSTTEEEE
T ss_pred CCC-cccc-EEEeeccccceEEEEecCCCceEEEecCCC-CcEEEecCCCCcccEEEEEECC-CCeEEEEEcCCCCceEe
Confidence 874 5566 68877775 77777764 444433322211 1122222345678999986521 12357999 78999999
Q ss_pred e-cCCCCCCCceEEecCCCCCCCccEEEccC-------CcEE---eccCceeee---CCCCcEEEecCCCC---------
Q psy1765 691 S-KVDKTKGSPLVLKKCDELSKTQRWSKTDK-------SELV---LAELLCLDA---GATKPKLTKCHEMG--------- 747 (867)
Q Consensus 691 ~-~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~-------~~~~---~~s~~CLD~---~g~~v~~~~C~~~~--------- 747 (867)
+ ++++++|+.+++++|++ +.+|+|.+... +..+ ..+++|||+ .++.|++|.|++..
T Consensus 523 V~~~stanGt~v~~w~~ng-~~nQqW~~~~~~~~~~~dG~y~I~~~~sgk~Ld~~s~s~~~V~~~~~ng~~nQqW~~~~d 601 (841)
T 2vse_A 523 LSNGSTTDGNGLLGFEFHG-GINQRWIIKPFSFNSIQDGIYQFMTVINQDLIADLTTNNYTIATKTNNYSSNQKWTVTYN 601 (841)
T ss_dssp EGGGCCSTTCCEEEEECCC-CGGGCEEEEECCSCCSCSEEEEEEESSCTTEEEEECSSTTBEEEEECCCCGGGCEEEEEE
T ss_pred cCCCCCCCCCeEEEeCCCC-CccCcceEecCccccCCCceEEEEecCCCCEEEeccCCCceEEEEecCCCccceeEEEec
Confidence 9 56678899999999999 89999999874 3333 336889974 35578888886532
Q ss_pred -----------------------------------CCCeEEEe--cCCeeeeecCC-CCceeecCCCCC-CCeEEEEecC
Q psy1765 748 -----------------------------------GSQEWNFV--LRDKTPIYSPA-TGTCLGSKNRLE-NTVIVMEMCA 788 (867)
Q Consensus 748 -----------------------------------~~Q~W~~~--~~~~~~i~n~~-sg~CLd~~~~~~-g~~v~~~~C~ 788 (867)
.+|+|.+. .+|...|+|+. +++|||+.+... |+.|++|+|+
T Consensus 602 ~~~~~Y~Irs~s~~~l~Lt~~s~a~g~~I~~tngs~~Q~W~~~~~~dG~ytI~n~~~sgk~LDV~gstanGt~Vq~w~~n 681 (841)
T 2vse_A 602 DKKRAYKIRNLQHAHLSLAWDSNHSDKIFGATGDYDDQYWIPILQTDGSFIFRNYKNPNKIFGTNGQPINDIPLKAQDVT 681 (841)
T ss_dssp TTTTEEEEEESSSTTCEEEECTTTCSBEEEECSCCGGGEEEEEECTTSCEEEEESSCTTEEEECSSSCCTTEECEEEECC
T ss_pred CCCcceeeeeccCceEEEEeccCCCCceEEecCCCcccEEEEEecCCCeEEEEEcCCCceEEEeccCCCCCCEEEEeCCC
Confidence 23555553 23444588888 999999985333 9999999999
Q ss_pred CCCCceEEEecCCc
Q psy1765 789 QHKDTSWDLVPVGS 802 (867)
Q Consensus 789 ~~~~Q~W~~~~~~~ 802 (867)
|+++|+|.+..+++
T Consensus 682 G~~nQqW~l~~~g~ 695 (841)
T 2vse_A 682 GQNNQKWYLRHLNS 695 (841)
T ss_dssp CCGGGCEEEEETTS
T ss_pred CChhhceEEecCcc
Confidence 99999999987653
|
| >3c9z_A Agglutinin II, SNA-II; beta-trefoil, ricin-B domain, glycosylation, glycoprotein, L sugar binding protein, plant protein; HET: NAG FUC SO4; 1.35A {Sambucus nigra} PDB: 3ca0_A* 3ca1_A* 3ca3_A* 3ca4_A* 3ca5_A* 3ca6_A* 3cah_A* 1hwm_B* 1hwn_B* 1hwo_B* 1hwp_B* | Back alignment and structure |
|---|
Probab=99.85 E-value=3e-21 Score=205.58 Aligned_cols=198 Identities=20% Similarity=0.232 Sum_probs=141.7
Q ss_pred ccceeeeecCCCceecccCCCCCCCcEEEEecCCC-CCCceeeecCCCceE-EeeceeeecCC----CccEEEeCCCCCC
Q psy1765 545 TSHFHIRLSSTDLCLTSKVDKTKGSPLVLKKCDEL-SKTQHWSKTDKSELV-LAELLCLDAGA----TKPKLTKCHEMGG 618 (867)
Q Consensus 545 ~~~g~ir~~~~~~CLD~~~~~~~g~~v~l~~C~~~-~~~Q~w~~t~~~~i~-~~~~~CLd~~g----~~v~l~~C~~~~~ 618 (867)
...|+||+ +++|||+.+ ...|++|.+|+||+. ..+|+|.+..+|.|+ ..+++|||+.+ +.++++.|++ ..
T Consensus 44 ~~~g~ir~--~g~CLd~~g-~~~g~~v~~~~c~~~~~~~Q~W~~~~~g~i~n~~sg~cLd~~~~~~g~~v~~~~c~~-~~ 119 (258)
T 3c9z_A 44 DSDDTIRS--MGKCMTANG-LNNGSNIVIFNCSTAAENAIKWEVPIDGSIINPSSGLVMTAPRAASRTILLLEDNIY-AA 119 (258)
T ss_dssp CTTSCEEE--TTEEEEEES-SSTTCEEEEECTTTSCGGGSCCBCCTTSCCBCTTTCCEEECSSSSTTCBCEEECCCC-CG
T ss_pred cCCCeEEE--CCeEEcccC-CCCCCEEEEEeCCCCCCcCCEEEEcCCCeEEECCCCcEEecCCCCCCcceEEEccCC-CC
Confidence 35678886 689999975 567999999999987 679999999999887 35789999864 5689999996 46
Q ss_pred CcceeeeeeeccceeeecccCcccccCCChhhhhhhhhccccCCCCCcccccccccccceEEEec-CCCceEeecCCCCC
Q psy1765 619 SQEYWCWLRCKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLS-GTDLCLTSKVDKTK 697 (867)
Q Consensus 619 ~Q~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~~~~~~~~~i~~~-~sg~CLd~~~~~~~ 697 (867)
+|. |.+..-..+.++.-.-....+++..........+......+.|.|.+.. +++|++. .+++|||+. ....
T Consensus 120 ~Q~-W~~~~~~~~~~~~i~~~~~~CLdv~~~g~~v~l~~C~~~~~~Q~W~~~~-----~g~i~~~~~~~~CLd~~-~~~~ 192 (258)
T 3c9z_A 120 SQG-WTVTNNVKPIVASIVGYKEMCLQSNGENNGVWMEDCEATSLQQQWALYG-----DRTIRVNSTRGLCVTTN-GYNS 192 (258)
T ss_dssp GGC-CEEESCCSCEEEEEECGGGCEEECCCTTSBCEEECCCTTCGGGCEEECT-----TSCEEETTEEEEEEEES-SSST
T ss_pred ccE-EEEcCCCCceEEeecCcCCcceEcCCCCceEEEEecCCCCcCCEEEEeC-----CceEEEecCCCeEEEcC-CCCC
Confidence 676 5665433333221111122333332111111111112245789998754 4778875 459999984 3456
Q ss_pred CCceEEecCCCCCCCccEEEccCCcEE-eccCceeeeC-----CCCcEEEecCCCCCCCeEEEe
Q psy1765 698 GSPLVLKKCDELSKTQRWSKTDKSELV-LAELLCLDAG-----ATKPKLTKCHEMGGSQEWNFV 755 (867)
Q Consensus 698 g~~v~l~~C~~~~~~Q~W~~~~~~~~~-~~s~~CLD~~-----g~~v~~~~C~~~~~~Q~W~~~ 755 (867)
|..|.+++|++ +.+|+|.|...+.+. ..+++|||+. |+.|++|+|+++ ++|+|.+.
T Consensus 193 g~~v~~~~C~~-~~~Q~W~~~~~g~i~~~~sg~~Ldv~~~~~~g~~v~~~~~~g~-~~Q~W~~~ 254 (258)
T 3c9z_A 193 KDLIIILKCQG-LPSQRWFFNSDGAIVNPKSRLVMDVRASNVSLREIIIFPATGN-PNQQWVTQ 254 (258)
T ss_dssp TCBEEEEECCC-CGGGCCEECTTSCEECTTTCCEEEEGGGCGGGCCEEEECCCCC-GGGCCEEE
T ss_pred CCEEEEEcCCC-CccCEEEECCCCcEEECCCCceEECCCCCCCCceEEEEcCCCC-ccceeecc
Confidence 78999999987 889999999888766 3589999986 558999999986 59999986
|
| >1vcl_A Hemolytic lectin CEL-III; hemolysis, hemagglutination, pore-forming, calcium, toxin; HET: BTB; 1.70A {Cucumaria echinata} SCOP: b.42.2.1 b.42.2.1 d.281.1.1 PDB: 2z48_A* 2z49_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=6.1e-21 Score=214.80 Aligned_cols=157 Identities=19% Similarity=0.314 Sum_probs=125.8
Q ss_pred ceeeeecCCCceecccCCCCCCCcEEEEecCCCCCCceeeecC------CCceEE-eeceeeecCC----CccEEEeCCC
Q psy1765 547 HFHIRLSSTDLCLTSKVDKTKGSPLVLKKCDELSKTQHWSKTD------KSELVL-AELLCLDAGA----TKPKLTKCHE 615 (867)
Q Consensus 547 ~g~ir~~~~~~CLD~~~~~~~g~~v~l~~C~~~~~~Q~w~~t~------~~~i~~-~~~~CLd~~g----~~v~l~~C~~ 615 (867)
.++|++..+++|||+.+... |++|.+|+||+. .+|+|+++. .++|+. .+++|||+.+ +.+++|+||+
T Consensus 108 ~y~I~N~~SG~CLDv~g~~~-Ga~V~l~~C~g~-~nQ~W~lt~~g~g~~~G~Irn~~sg~CLDv~g~s~Ga~V~l~~C~g 185 (432)
T 1vcl_A 108 ATEIINLASGKCLDIEGSDG-TGDIGVYDCQNL-DDQYFYVRSRGPELFYGRLRNEKSDLCLDVEGSDGKGNVLMYSCED 185 (432)
T ss_dssp EEEEEETTTCCEEEESSSSS-CSBEEEECCCCC-GGGCEEECCCCCEEEEEEEEETTTCCEEEESSSSSCEEEEEECCCS
T ss_pred ceEEEECCCCceeeecCCCC-CCeEEEEeCCCC-CccceeeecCCCCccceEEEECCCCcEEEecCCCCCCeEEEEecCC
Confidence 34788899999999987655 999999999987 699999998 677875 3689999974 4689999998
Q ss_pred CCCCcceeeeeeeccceeeecccCcccccCCChhhhhhhhhccccCCCCCcccccccccccceEEEecCCCceEeecCCC
Q psy1765 616 MGGSQEYWCWLRCKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSGTDLCLTSKVDK 695 (867)
Q Consensus 616 ~~~~Q~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~~~~~~~~~i~~~~sg~CLd~~~~~ 695 (867)
+++|+| .|. .+++|++..+++|||+.+..
T Consensus 186 -~~nQ~W-~~~-------------------------------------------------~~G~I~n~~Sg~CLDv~g~s 214 (432)
T 1vcl_A 186 -NLDQWF-RYY-------------------------------------------------ENGEIVNAKSGMCLDVEGSD 214 (432)
T ss_dssp -CGGGCE-EEE-------------------------------------------------TTSCEEETTTCCEEEESSSS
T ss_pred -CCCeeE-EEe-------------------------------------------------CCCCEEeCCCCeEEEeCCCC
Confidence 566764 331 23679999999999994432
Q ss_pred CCCCceEEecCCCCCCCccEEEccC-------CcEEeccCceeeeCC----CCcEEEecCCCCCCCeEEEecCCe
Q psy1765 696 TKGSPLVLKKCDELSKTQRWSKTDK-------SELVLAELLCLDAGA----TKPKLTKCHEMGGSQEWNFVLRDK 759 (867)
Q Consensus 696 ~~g~~v~l~~C~~~~~~Q~W~~~~~-------~~~~~~s~~CLD~~g----~~v~~~~C~~~~~~Q~W~~~~~~~ 759 (867)
. ++.|++++|++ +.+|+|.+... ......+++|||+.+ +.|++|+|+++ .+|+|.|...+.
T Consensus 215 t-~a~V~l~~C~g-~~nQ~W~~~~~~~~Gg~~~I~n~~SGkCLDv~g~st~~~V~~~~C~g~-~nQ~W~~~~~~~ 286 (432)
T 1vcl_A 215 G-SGNVGIYRCDD-LRDQMWSRPNAYCNGDYCSFLNKESNKCLDVSGDQGTGDVGTWQCDGL-PDQRFKWVFDDW 286 (432)
T ss_dssp S-CSBEEEECCCC-CGGGCEECCGGGCBTTEECCEETTTCCEEEESSSSSCSBEEEECCCCC-GGGCEEEECCCB
T ss_pred C-CCeEEEEecCC-CCccEEEEecccCCCCeEEEEECCCCCeEecCCCCCCceEEEEccCCC-ccceEEEEeCCC
Confidence 2 37899999998 88999999876 233456899999985 58999999975 599999986543
|
| >2aai_B Ricin (B chain); glycosidase; HET: GAL BGC NDG NAG BMA MAN; 2.50A {Ricinus communis} SCOP: b.42.2.1 b.42.2.1 PDB: 3rti_B* 3rtj_B* 1rzo_B* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.2e-20 Score=201.48 Aligned_cols=194 Identities=18% Similarity=0.293 Sum_probs=141.4
Q ss_pred ceEEeeceeeecC------CCccEEEeCCC-CCCCcceeeeeeeccceeeecccCcccccCCC-hhhhhhhhhccccC--
Q psy1765 592 ELVLAELLCLDAG------ATKPKLTKCHE-MGGSQEYWCWLRCKSFKWYLDNVYPEMILPSD-DEDRLKKKWAQVEQ-- 661 (867)
Q Consensus 592 ~i~~~~~~CLd~~------g~~v~l~~C~~-~~~~Q~~w~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-- 661 (867)
.|+-.+++|||+. |+.+++|+|+. .+.+|. |.|. .+|.+... ..+++.. ..+...........
T Consensus 12 ~i~~~sg~cldv~~~~~~~g~~v~~~~c~~~~~~~Q~-W~~~--~~g~ir~~----g~cLdv~g~~~g~~v~~~~c~~~~ 84 (262)
T 2aai_B 12 RIVGRNGLCVDVRDGRFHNGNAIQLWPCKSNTDANQL-WTLK--RDNTIRSN----GKCLTTYGYSPGVYVMIYDCNTAA 84 (262)
T ss_dssp CEECGGGCEEEEGGGCCSTTCBEEEECCCSSCCGGGC-EEEC--TTSBEEET----TEEEEESCSSTTCBEEEEETTTSC
T ss_pred EEEcCCCceEEcCCCCCCCCCEEEEeeCCCCCChhce-EEEe--CCceEEEC----CEEEeccCCCCCCEEEEEeCCCCC
Confidence 4554478999975 45689999942 356776 5665 56765542 2222221 11222222223333
Q ss_pred CCCCcccccccccccceEEEecCCCceEeecCCCCCCCceEEecCCCCCCCccEEEccCCc-----EEeccCceeeeCCC
Q psy1765 662 PKFQPWYSRARNYTSHFHIRLSGTDLCLTSKVDKTKGSPLVLKKCDELSKTQRWSKTDKSE-----LVLAELLCLDAGAT 736 (867)
Q Consensus 662 ~~~q~W~~~~~~~~~~~~i~~~~sg~CLd~~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~~~-----~~~~s~~CLD~~g~ 736 (867)
.+.|+|.+.. .+.|+|..+++|||+.+. .+|+.|.+++|++ ..+|+|.++.... ++..+++|||+.|+
T Consensus 85 ~~~Q~W~~~~-----~G~i~n~~sg~cLd~~~~-~~g~~v~~~~c~g-~~~Q~W~~~~~~~~~~~~i~~~~~~CLd~~g~ 157 (262)
T 2aai_B 85 TDATRWQIWD-----NGTIINPRSSLVLAATSG-NSGTTLTVQTNIY-AVSQGWLPTNNTQPFVTTIVGLYGLCLQANSG 157 (262)
T ss_dssp GGGSBCEECT-----TSCEEEETTEEEEECSSC-STTCBCEEEECCC-CGGGCCEECSCCSCEEEEEECGGGCEEEEETT
T ss_pred CccceEEEcC-----CCCEEeCCCCceEecCCC-CCCceeEEEecCC-CCccEEEEcCCCCCceeeeeccCCeeeecCCc
Confidence 6789998754 478999999999999543 5788999999998 8899999986432 33346899999999
Q ss_pred CcEEEecCCCCCCCeEEEecCCeeeeecC-CCCceeecCCCCCCCeEEEEec-CCCCCceEEEecCC
Q psy1765 737 KPKLTKCHEMGGSQEWNFVLRDKTPIYSP-ATGTCLGSKNRLENTVIVMEMC-AQHKDTSWDLVPVG 801 (867)
Q Consensus 737 ~v~~~~C~~~~~~Q~W~~~~~~~~~i~n~-~sg~CLd~~~~~~g~~v~~~~C-~~~~~Q~W~~~~~~ 801 (867)
.|++++|++.+.+|+|.+..++. |++. .+++|||+.+...|+.|.+++| +++.+|+|.|...+
T Consensus 158 ~v~l~~C~~~~~~Q~w~~~~~g~--ir~~~~~~~CLd~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~g 222 (262)
T 2aai_B 158 QVWIEDCSSEKAEQQWALYADGS--IRPQQNRDNCLTSDSNIRETVVKILSCGPASSGQRWMFKNDG 222 (262)
T ss_dssp EEEEECCCTTSSCCCEEECTTSC--EEETTSTTEEEEECCSSCSSCEEEEESTTCCTTSCCEECTTS
T ss_pred eEEEEecCCCCCcCEEEEeCCcc--EEECCCCCceEccCCCCCCCeEEEEcCCCCCCcCeEEECCCC
Confidence 99999999866799999998776 5554 5799999976555889999999 67778999998644
|
| >1abr_B Abrin-A; glycosidase/carbohydrate complex, lectin, lectin (agglutinin), glycoprotein, plant SEED protein, plant toxin; HET: NDG NGZ MAN BMA BGC; 2.14A {Abrus precatorius} SCOP: b.42.2.1 b.42.2.1 PDB: 2zr1_B* 2q3n_B* | Back alignment and structure |
|---|
Probab=99.83 E-value=8.3e-21 Score=203.22 Aligned_cols=195 Identities=15% Similarity=0.242 Sum_probs=141.4
Q ss_pred ceEEeeceeeecC------CCccEEEeC-CCCCCCcceeeeeeeccceeeecccCcccccCCC-hhhhhhhhhccccC--
Q psy1765 592 ELVLAELLCLDAG------ATKPKLTKC-HEMGGSQEYWCWLRCKSFKWYLDNVYPEMILPSD-DEDRLKKKWAQVEQ-- 661 (867)
Q Consensus 592 ~i~~~~~~CLd~~------g~~v~l~~C-~~~~~~Q~~w~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-- 661 (867)
.|+-.+++|||+. |+.+++|+| |..+.+|. |.|. .+|.+... ..+++.. ..............
T Consensus 17 ~i~~~sg~CLDv~~~~~~~g~~v~~~~c~~~~~~~Q~-w~~~--~~g~ir~~----g~CLdv~g~~~g~~v~~~~c~~~~ 89 (267)
T 1abr_B 17 RIGGRDGMCVDVYDNGYHNGNRIIMWKCKDRLEENQL-WTLK--SDKTIRSN----GKCLTTYGYAPGSYVMIYDCTSAV 89 (267)
T ss_dssp CEECGGGCEEEEGGGCCSTTCBEEEECCCSSCCGGGC-EEEC--TTSBEEET----TEEEEESCSSTTCBEEEECTTTSC
T ss_pred EEEcCCCCEEECCCCCCCCCcEEEEEecCCCCChhcE-EEEc--cCceEEEC----CEEEcccCCCCCCEEEEEeCCCCC
Confidence 3443468999986 345899999 55667787 5665 46655432 2232222 11111222222223
Q ss_pred CCCCcccccccccccceEEEecCCCceEeecCCCCCCCceEEecCCCCCCCccEEEccCCc-----EEeccCceeeeCCC
Q psy1765 662 PKFQPWYSRARNYTSHFHIRLSGTDLCLTSKVDKTKGSPLVLKKCDELSKTQRWSKTDKSE-----LVLAELLCLDAGAT 736 (867)
Q Consensus 662 ~~~q~W~~~~~~~~~~~~i~~~~sg~CLd~~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~~~-----~~~~s~~CLD~~g~ 736 (867)
...|+|.+.. .+.|+|..+++|||+.+ ..+|+.|.+++|++ ..+|+|.++.... +...+++|||+.|+
T Consensus 90 ~~~Q~W~~~~-----~G~i~n~~sg~cLd~~~-~~~g~~v~~~~c~g-~~~Q~W~~~~~~~~~~~~~~~~~~~CL~~~g~ 162 (267)
T 1abr_B 90 AEATYWEIWD-----NGTIINPKSALVLSAES-SSMGGTLTVQTNEY-LMRQGWRTGNNTSPFVTSISGYSDLCMQAQGS 162 (267)
T ss_dssp GGGSBCEECT-----TSCEEETTTTEEEECCC-SSTTCBCEEECCCC-CGGGCCEESSCCCCEEECEECGGGCEEEEETT
T ss_pred CccCEEEEec-----CCcEEeCCCCcEEeccC-CCCCcEEEEEeCCC-CccceEEEcCCccceEEEeecccCcCeecCCC
Confidence 4889998755 47899999999999853 46788999999998 8899999986432 22347899999999
Q ss_pred CcEEEecCCCCCCCeEEEecCCeeeeecCCCCceeecCCCCCCCeEEEEec-CCCCCceEEEecCC
Q psy1765 737 KPKLTKCHEMGGSQEWNFVLRDKTPIYSPATGTCLGSKNRLENTVIVMEMC-AQHKDTSWDLVPVG 801 (867)
Q Consensus 737 ~v~~~~C~~~~~~Q~W~~~~~~~~~i~n~~sg~CLd~~~~~~g~~v~~~~C-~~~~~Q~W~~~~~~ 801 (867)
.|++++|+++..+|+|.+..++.+ ..+..+++|||+.+...|+.|.+++| +++++|+|.|...+
T Consensus 163 ~v~l~~C~~~~~~Q~W~~~~~g~i-~~~~~~~~CLd~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~g 227 (267)
T 1abr_B 163 NVWMADCDSNKKEQQWALYTDGSI-RSVQNTNNCLTSKDHKQGSTILLMGCSNGWASQRWVFKNDG 227 (267)
T ss_dssp EEEEECCCTTCGGGCEEECTTSCE-EETTEEEEEEEESSSSTTCBEEEEESTTCCGGGCCEECTTS
T ss_pred eEEEEecCCCCcccEEEEeCCCCE-EEecCCCeEEECcCCCCCCEEEEEECCCCCccCEEEECCCC
Confidence 999999999867999999877764 33566899999976555889999999 67778999998643
|
| >3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.8e-21 Score=218.51 Aligned_cols=205 Identities=15% Similarity=0.115 Sum_probs=135.1
Q ss_pred CCcEEEEEEeCCCChHHHHHHHHHHHh---cCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhh
Q psy1765 51 LPSTSVIICFYNEHPATLYRSVQTLLS---RTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGL 127 (867)
Q Consensus 51 ~P~vSVIIp~yNe~~~~l~~~l~Svl~---qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi 127 (867)
.|+||||||+|||+. .|.+||+||++ +++.++ |||||||||+|++
T Consensus 93 ~p~vSVVIP~yNe~~-~l~~~l~sl~~~l~~~~~~~--EIIVVDDgStD~T----------------------------- 140 (387)
T 3f1y_A 93 GLTVSAVLPSRNVAD-TVGGIIDEIHALNERAPLID--QILVVDADSEDGT----------------------------- 140 (387)
T ss_dssp TCCEEEEEEESSCTT-THHHHHHHHHHHHHHSCCCS--EEEEEECSCSSSH-----------------------------
T ss_pred CCeEEEEEEcCCCHH-HHHHHHHHHHHHHhcCCCCe--EEEEEcCcCCccH-----------------------------
Confidence 589999999999876 99999999986 344566 9999999999983
Q ss_pred HHHhhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhcCCCEE
Q psy1765 128 IRARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVL 207 (867)
Q Consensus 128 ~~a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A~Gd~l 207 (867)
.+.+.++........+++++.++|.|++.|+|.|++.|+||||
T Consensus 141 -------------------------------------~~i~~~~~~~v~~~~~~~i~~~~n~G~g~A~n~G~~~A~gd~i 183 (387)
T 3f1y_A 141 -------------------------------------AGVAASHGAEVYSENELMSGYGDAHGKGDAMWRALSVTRGDLV 183 (387)
T ss_dssp -------------------------------------HHHHHHTTCEEEEGGGTTGGGCSCCSHHHHHHHHTTTCCSSEE
T ss_pred -------------------------------------HHHHHHhCchhcccceeEecCCccCCHHHHHHHHHHhcCCCEE
Confidence 2222222111000123345567899999999999999999999
Q ss_pred EEEcCCcc-cCccchHHHHHHHHhcC-CceeeeEEeeecCCCceeccccccccc--ccccc--ccccccCCcCcCCCCCC
Q psy1765 208 VFLDSHIE-VNTHWLEPLLVPIAERT-NTVTVPIIDIINADTFQYTSSALVRGG--FNWGL--HFKWENLPKGTLNSSED 281 (867)
Q Consensus 208 lfLDaD~~-v~p~wLe~Ll~~l~~~~-~~vv~p~i~~i~~~~~~~~~~~~~~g~--f~~~l--~~~~~~~~~~~~~~~~~ 281 (867)
+|||+|+. ++|+||+.|++.+.+++ .++|.+.............. ..++ ..|.. .++. ..+ ..
T Consensus 184 ~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~~~~~~~~~~~~~---~~~g~v~~~~~~~l~~~-~~~--~l----- 252 (387)
T 3f1y_A 184 LYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAYRRPFRKGESIEE---DGGGRVTELTAKPLFNL-FYP--EL----- 252 (387)
T ss_dssp EECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEEECC-------CC---BCCSHHHHHTHHHHHHH-HCG--GG-----
T ss_pred EEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEeecccccccccccc---ccCCchhhhhHHHHHHH-HhH--hh-----
Confidence 99999999 89999999999998774 56666544222111000000 0000 00000 0000 000 00
Q ss_pred CCCcccccccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHH-HcCCe-EEEEcccEEEE
Q psy1765 282 FIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIW-MCGGS-LAMIPCSRIGH 344 (867)
Q Consensus 282 ~~~p~~~~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~-~~G~~-i~~~P~s~V~H 344 (867)
. ......+|+++++|++|+++ +|+++| +.|+|+.+++. +.|++ |..+|-....|
T Consensus 253 --~--~~~d~~sG~~a~rR~~l~~i-~f~~gy----g~e~ell~~~~~~~G~~~I~eVpi~~~~h 308 (387)
T 3f1y_A 253 --A--GFVQPLAGEFVADRELFCSI-PFLTGY----AVETGIMIDVLKKVGLGAMAQVDLGERQN 308 (387)
T ss_dssp --T--TCSCTTCSCEEEEHHHHTTS-CEECST----THHHHHHHHHHHHHCGGGEEEEEEEECCC
T ss_pred --c--cccccccccEEEEHHHHHhC-CCCCCc----chHHHHHHHHHHhcCCCeEEEEecceeec
Confidence 0 01123467899999999999 677654 67999999985 56987 99998555433
|
| >1m2t_B Mistletoe lectin I B chain; ribosome inactivation, ribosome inhibitor, hydrolase; HET: NAG FUC ADE; 1.89A {Viscum album} SCOP: b.42.2.1 b.42.2.1 PDB: 2r9k_B* 3d7w_B* 3cef_B* 1sz6_B* 1pum_B* 1puu_B* 2rg9_B* 3o5w_B* 1onk_B* 1oql_B* 1tfm_B* 1pc8_B* 1yf8_B* 1ce7_B* 2mll_B* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.9e-20 Score=200.00 Aligned_cols=193 Identities=17% Similarity=0.211 Sum_probs=141.0
Q ss_pred eEEeeceeeecC------CCccEEEeCC-CCCCCcceeeeeeeccceeeecccCcccccCCC-hhhhhhhhhccccC--C
Q psy1765 593 LVLAELLCLDAG------ATKPKLTKCH-EMGGSQEYWCWLRCKSFKWYLDNVYPEMILPSD-DEDRLKKKWAQVEQ--P 662 (867)
Q Consensus 593 i~~~~~~CLd~~------g~~v~l~~C~-~~~~~Q~~w~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~ 662 (867)
|+..+++|||+. |+.+++|+|+ ....+|. |.|. .+|.+.+.. .+++.. .............. .
T Consensus 14 i~~~sg~ClDv~~~~~~~g~~v~~~~c~~~~~~~Q~-w~~~--~~g~ir~~g----~CLdv~~~~~g~~v~~~~c~~~~~ 86 (263)
T 1m2t_B 14 IVGRNGMTVDVRDDDFHDGNQIQLWPSKSNNDPNQL-WTIK--KDGTIRSNG----SCLTTYGYTAGVYVMIFDCNTAVR 86 (263)
T ss_dssp EECGGGCEEEEGGGCCSTTCBEEEECCCCSCCGGGC-EEEC--TTSCEEETT----EEEEESCSSTTCBEEEEETTTSCG
T ss_pred EEcCCCCEEECCCCCCCCCCEEEEeeCCCCCChhce-eEEC--CCCeEEEcc----EEEcccccCCCCEEEEEeCCCCCC
Confidence 443478999985 3468999995 3456776 5675 567766542 233221 11111222222333 6
Q ss_pred CCCcccccccccccceEEEecCCCceEeecCCCCCCCceEEecCCCCCCCccEEEccCCcE-----EeccCceeeeCCCC
Q psy1765 663 KFQPWYSRARNYTSHFHIRLSGTDLCLTSKVDKTKGSPLVLKKCDELSKTQRWSKTDKSEL-----VLAELLCLDAGATK 737 (867)
Q Consensus 663 ~~q~W~~~~~~~~~~~~i~~~~sg~CLd~~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~~~~-----~~~s~~CLD~~g~~ 737 (867)
..|.|.+.. .+.|+|..+++|||+. +..+|+.+.+++|++ ..+|+|.++..... ...+++|||+.|+.
T Consensus 87 ~~Q~W~~~~-----~g~i~n~~sg~cLd~~-~~~~g~~v~~~~c~~-~~~Q~W~~~~~~~~~~~~i~~~s~~CLd~~g~~ 159 (263)
T 1m2t_B 87 EATIWQIWG-----NGTIINPRSNLVLAAS-SGIKGTTLTVQTLDY-TLGQGWLAGNDTAPRETTIYGFRDLCMESAGGS 159 (263)
T ss_dssp GGGCCEECT-----TSCEEETTTTEEEECS-SCSTTCBCEEECCCC-CGGGCCEESSCCSCEEEEEECGGGCEEEEETTE
T ss_pred cccEEEECC-----CCCEEeCCCCceEccC-CCCccceEEEeccCC-CcCcEEEEecccceeeeeecccCccccccCCCE
Confidence 789998754 4789999999999985 345688999999998 88999999874432 23479999999999
Q ss_pred cEEEecCCCCCCCeEEEecCCeeeeecC-CCCceeecCCCCCCCeEEEEec-CCCCCceEEEecCC
Q psy1765 738 PKLTKCHEMGGSQEWNFVLRDKTPIYSP-ATGTCLGSKNRLENTVIVMEMC-AQHKDTSWDLVPVG 801 (867)
Q Consensus 738 v~~~~C~~~~~~Q~W~~~~~~~~~i~n~-~sg~CLd~~~~~~g~~v~~~~C-~~~~~Q~W~~~~~~ 801 (867)
|++++|+++..+|+|.|..++. |++. .+++||+..+...|+.|++++| +++.+|+|.|...+
T Consensus 160 v~l~~C~g~~~~Q~W~~~~~g~--ir~~~~~~lcl~~~~~~~G~~v~~~~C~~~~~~Q~W~~~~~g 223 (263)
T 1m2t_B 160 VYVETCTAGQENQRWALYGDGS--IRPKQLQSQCLTNGRDSISTVINIVSCSAGSSGQRWVFTNEG 223 (263)
T ss_dssp EEEECCCTTCGGGCEEECTTSC--EEETTCTTEEEECSSCSTTCBCEEEESTTCCGGGCEEECTTS
T ss_pred EEEEecCCCCcccEEEEcCCCe--EEEcCCCceeeccCCcCCCCEEEEEECCCCCcccEEEEcCCC
Confidence 9999999865699999988776 4444 5678999866556889999999 78888999997654
|
| >1ggp_B TKL-1, protein (lectin 1 B chain); sugar binding protein; 2.70A {Trichosanthes kirilowii} SCOP: b.42.2.1 b.42.2.1 | Back alignment and structure |
|---|
Probab=99.83 E-value=1.7e-20 Score=199.34 Aligned_cols=196 Identities=18% Similarity=0.195 Sum_probs=135.9
Q ss_pred cceeeeecCCCceecccCCCCCCCcEEEEecCCC-CCCceeeecCCCceEE-eeceeeecCC----CccEEEeCCCCCCC
Q psy1765 546 SHFHIRLSSTDLCLTSKVDKTKGSPLVLKKCDEL-SKTQHWSKTDKSELVL-AELLCLDAGA----TKPKLTKCHEMGGS 619 (867)
Q Consensus 546 ~~g~ir~~~~~~CLD~~~~~~~g~~v~l~~C~~~-~~~Q~w~~t~~~~i~~-~~~~CLd~~g----~~v~l~~C~~~~~~ 619 (867)
..|+||+ +++|||+.+. + |++|.+|+||+. ..+|+|.++.+|.|+. .+++|||+.+ +.+.++.|++. .+
T Consensus 45 ~~g~ir~--~g~CLdv~g~-~-g~~v~~~~c~~~~~~~Q~W~~~~~g~i~n~~sg~cLd~~~~~~g~~v~~~~c~~~-~~ 119 (254)
T 1ggp_B 45 REATIRS--NGGCLTTAAA-E-QAKAGIYDCTQATAELSAWEIADNGTIINPASSLVLSSGAANSLLDLGVQTNSYA-SA 119 (254)
T ss_dssp TTSCCBS--SSSEEEEECS-S-SCEEEEECTTTSCHHHHCCEECTTSCEEETTTTEEEECSSSCTTEECEEECCCCC-ST
T ss_pred CCCeEEE--CceEEeccCC-C-CCEEEEEECCCCCCcCCEEEEecCCCEEeCCCCeEEeCCCCCCCCEEEEEecCCC-CC
Confidence 4567776 5799999765 5 999999999986 5799999999999874 5789999874 46899999974 57
Q ss_pred cceeeeeeeccceeeecccCcccccCCChhhhhhhhhccccCCCCCcccccccccccceEEEec-CCCceEeecCCCCCC
Q psy1765 620 QEYWCWLRCKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLS-GTDLCLTSKVDKTKG 698 (867)
Q Consensus 620 Q~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~~~~~~~~~i~~~-~sg~CLd~~~~~~~g 698 (867)
|.| .+..-.......-.-+...+++..........+........|.|.+.. ++.|+.. .+++||++. ...+|
T Consensus 120 Q~W-~~~~~~~p~~~~~~g~~~~Cld~~~~g~~v~l~~C~~~~~~Q~W~~~~-----~g~ir~~~~~~~Cl~~~-~~~~g 192 (254)
T 1ggp_B 120 QGW-RTGNETSASVTQISGSAQLCMQAGNGPANLWMSECRAGKAEQQWALLT-----DKSIRSETNSDNCLTSA-ADAGP 192 (254)
T ss_dssp TCC-EESSCCSCEEEEEECGGGCEECCCTTTTBCCEECCCSSCTTSEEEEET-----TTEEEESSCTTEEECCC-CCSSC
T ss_pred ceE-EEeccCCCcceeecccCCeeEecCCCCceEEEEcCCCCCccCEEEEcC-----CCCEEEeCCCCeEEecC-CCCCC
Confidence 774 443111111100000123333332111111111112235779998754 4778753 578999983 34567
Q ss_pred CceEEecCCCCCCCccEEEccCCcEE-eccCceeeeC-----CCCcEEEecCCCCCCCeEEEe
Q psy1765 699 SPLVLKKCDELSKTQRWSKTDKSELV-LAELLCLDAG-----ATKPKLTKCHEMGGSQEWNFV 755 (867)
Q Consensus 699 ~~v~l~~C~~~~~~Q~W~~~~~~~~~-~~s~~CLD~~-----g~~v~~~~C~~~~~~Q~W~~~ 755 (867)
+.|++++|++ +.+|+|.|...+.++ ..+++|||+. |+.|++|+|+++ .+|+|.+.
T Consensus 193 ~~V~l~~C~g-~~~Q~W~~~~~g~i~~~~sg~CLd~~~~~~~~~~v~~~~c~g~-~~Q~W~~~ 253 (254)
T 1ggp_B 193 KTILLALCSG-PASQRWVFDDDGSILSLYDDKQMDSEGAAAAAKQIILWWNAAE-PNQIWLAL 253 (254)
T ss_dssp CCCBEEECCC-CTTSCCEECTTSSEEETTTTEEEEESSSCCSSSCEEEECCCCC-GGGCCEEE
T ss_pred CEEEEEcCCC-CccceEEECCCCcEEeCCCCeEEeCCCCCCCCceEEEEcCCCC-ccceEEec
Confidence 8999999997 889999999877665 5589999985 458999999984 69999874
|
| >1ybi_A HA33A, HA33/A, non-toxin haemagglutinin HA34; beta-trefoil; 1.50A {Clostridium botulinum} | Back alignment and structure |
|---|
Probab=99.82 E-value=8.9e-20 Score=196.08 Aligned_cols=238 Identities=12% Similarity=0.145 Sum_probs=169.9
Q ss_pred eeecC-CCceecccCCCCCCCcEEEEecCCCCCCceeeecCC---C--ceE-E---eeceeeecC--CCccEEEeCCCCC
Q psy1765 550 IRLSS-TDLCLTSKVDKTKGSPLVLKKCDELSKTQHWSKTDK---S--ELV-L---AELLCLDAG--ATKPKLTKCHEMG 617 (867)
Q Consensus 550 ir~~~-~~~CLD~~~~~~~g~~v~l~~C~~~~~~Q~w~~t~~---~--~i~-~---~~~~CLd~~--g~~v~l~~C~~~~ 617 (867)
|++.. +++.||.. ++.|.+|..++. .+|.|.|..+ + .|+ + +++++|+.. ++.+..++.++..
T Consensus 13 I~~~~~~~~~l~~~-----~~~v~~~~~~~~-~~Q~w~~~y~~~~~~Y~I~n~~~~~~~l~L~~~~~~~~v~~~~~~~~~ 86 (288)
T 1ybi_A 13 ISCKADTNLFFYQV-----AGNVSLFQQTRN-YLERWRLIYDSNKAAYKIKSMDIHNTNLVLTWNAPTHNISTQQDSNAD 86 (288)
T ss_dssp EEETTEEEEEEEEE-----TTEEEEECCCCS-GGGCEEEEEETTTTEEEEEECCCSSSCEEEEECTTSSBEEEEECCCCG
T ss_pred EEEccCCCeEEecC-----CCcEEEecCCCc-cccEEEEEEeCCCCEEEEEEeccCCCceEEEecCCCceEEEeCCCCcc
Confidence 44443 67899975 557999987654 5999997643 3 243 3 468999875 4567888887643
Q ss_pred CCcceeeeeeec-cceeeecccC-cccccCCChhhhhhhhhccccCCCCCcccccccc----cccceEEEecCC-CceEe
Q psy1765 618 GSQEYWCWLRCK-SFKWYLDNVY-PEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARN----YTSHFHIRLSGT-DLCLT 690 (867)
Q Consensus 618 ~~Q~~w~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~~~----~~~~~~i~~~~s-g~CLd 690 (867)
. |. |.+.+.. +|.+++.+.. +..+++..+.+. ..........+.|+|.+.... ....+.|++..+ ++|||
T Consensus 87 ~-Q~-W~l~k~~~dG~y~I~n~~~s~~vLdv~t~~g-~v~~~~~ngs~~Q~w~i~~~~~~~~~~G~y~I~~~~s~~~vld 163 (288)
T 1ybi_A 87 N-QY-WLLLKDIGNNSFIIASYKNPNLVLYADTVAR-NLKLSTLNNSNYIKFIIEDYIISDLNNFTCKISPILDLNKVVQ 163 (288)
T ss_dssp G-GC-EEEEEETTTTEEEEEESSCTTCEEEEETTTT-EEEEECCCSSGGGCEEEEEHHHHHHTTCEEEEEETTCTTEEEE
T ss_pred c-eE-EEEEEECCCCeEEEEECCCCCeeEEEECCCC-cEEEeCCCCCcCceEEEccccccCCCCceEEEEEccCCCeEEE
Confidence 3 43 7877664 8999998873 433333222222 344444446778999876421 113367888765 59999
Q ss_pred ecCCCCCCCceEEecCCCCCCCccEEEccC---CcEE----eccCceeeeC---CCCcEEEecCCC-CCCCeEEEe----
Q psy1765 691 SKVDKTKGSPLVLKKCDELSKTQRWSKTDK---SELV----LAELLCLDAG---ATKPKLTKCHEM-GGSQEWNFV---- 755 (867)
Q Consensus 691 ~~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~---~~~~----~~s~~CLD~~---g~~v~~~~C~~~-~~~Q~W~~~---- 755 (867)
+.. ..|+.|.+++|++ ..+|+|+|+.. +... ..+++|||+. |+.|++|.|+++ ..+|+|.+.
T Consensus 164 v~~--~~g~~v~~w~~~g-~~nQ~W~~~~~~~~~~Y~i~~~~~s~~~L~~~~~~G~~v~~~~~~~~~~~~Q~W~~~~~~~ 240 (288)
T 1ybi_A 164 QVD--VTNLNVNLYTWDY-GRNQKWTIRYNEEKAAYQFFNTILSNGVLTWIFSNGNTVRVSSSNDQNNDAQYWLINPVSD 240 (288)
T ss_dssp ESS--SSCCBEEEEECCC-CGGGCEEEEEETTTTEEEEEETTSSSEEEEECGGGTTBEEEEECCCSCCGGGCEEEEECTT
T ss_pred eeC--CCCCEEEEecCCC-CccCEEEEEEccCCCeEEEEeccCCceEEEecCCCCCEEEEEecCCCCChhcEEEeeeecC
Confidence 943 3488999999999 89999999743 2222 2468999975 779999999754 358999997
Q ss_pred cCCeeeeec-CCCCceeecCCCCC--CCeEEEEecCCCCCceEEEec
Q psy1765 756 LRDKTPIYS-PATGTCLGSKNRLE--NTVIVMEMCAQHKDTSWDLVP 799 (867)
Q Consensus 756 ~~~~~~i~n-~~sg~CLd~~~~~~--g~~v~~~~C~~~~~Q~W~~~~ 799 (867)
.++.++|++ ..+|+|||+.+.++ |+.|++|+|+++.+|+|.|+.
T Consensus 241 ~~G~y~i~n~~~sg~~LDv~~~stanGt~v~~w~~~g~~nQ~W~~~~ 287 (288)
T 1ybi_A 241 TDETYTITNLRDTTKALDLYGGQTANGTAIQVFNYHGDDNQKWNIRN 287 (288)
T ss_dssp CSSEEEEEETTEEEEEEEEGGGCCSTTCBEEEEECCCCGGGCEEEEC
T ss_pred CCCEEEEEECCCCCeEEEECCCCCCCCCEEEEEcCCCChhhcEEeeC
Confidence 456667899 78999999987655 999999999999999999863
|
| >2vse_A MTX holotoxin, mosquitocidal toxin; ADP-ribosyltransferase, lectin, ricin-B-like domain; 2.5A {Lysinibacillus sphaericus} PDB: 2vsa_A | Back alignment and structure |
|---|
Probab=99.81 E-value=1.3e-19 Score=217.78 Aligned_cols=243 Identities=13% Similarity=0.133 Sum_probs=178.4
Q ss_pred eeeecC-CCceecccCCCCCCCcEEEEecCCCCCCceeeecCCCc-----eEE-eeceeeecCCC-------ccEEEeCC
Q psy1765 549 HIRLSS-TDLCLTSKVDKTKGSPLVLKKCDELSKTQHWSKTDKSE-----LVL-AELLCLDAGAT-------KPKLTKCH 614 (867)
Q Consensus 549 ~ir~~~-~~~CLD~~~~~~~g~~v~l~~C~~~~~~Q~w~~t~~~~-----i~~-~~~~CLd~~g~-------~v~l~~C~ 614 (867)
.|.+.. +++|||+. ....|++|+||+|++. .+|+|+|+.++. |+. .++.||++.++ .+..+.+.
T Consensus 274 ~I~~~~~~~~vldv~-s~~~g~~VqLw~~~~~-~nQ~W~f~yd~~~g~Y~IrN~~sgk~L~~~~~~s~~G~~~V~~~~~~ 351 (841)
T 2vse_A 274 QIKNKKDRNIVVTLD-SDYGGSPVESYKNFGF-ENQKWNIKYDSKKNAYKIYNRETPTLLLSWNSNSSNGEQVIRGYTES 351 (841)
T ss_dssp EEEESSCTTEEEEEC-SSSTTEEEEEEECCCC-GGGCEEEEEETTTTEEEEEESSSTTCEEECCTTCGGGCCBCEEECCC
T ss_pred EEEEccCCCEEEecc-cCCCCCeEEEEcCCCC-ccceEEEEECCCCCEEEEEEcCCCCEEEEcCCCCCCCceEEEEecCC
Confidence 355553 56699984 3456899999999864 699999987776 653 46789987421 24555555
Q ss_pred CCCCCcceeeeeeeccceeeeccc-CcccccCCC---hhhhhhhhhccccCCCCCccccccccc----ccceEEEecCCC
Q psy1765 615 EMGGSQEYWCWLRCKSFKWYLDNV-YPEMILPSD---DEDRLKKKWAQVEQPKFQPWYSRARNY----TSHFHIRLSGTD 686 (867)
Q Consensus 615 ~~~~~Q~~w~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~q~W~~~~~~~----~~~~~i~~~~sg 686 (867)
+ ...|. |.+.+..+|.+.+.+. .+..+++.. .......+.........|.|.+..... ...+.|++..++
T Consensus 352 g-s~~Q~-W~i~~~gdG~y~I~N~~~sglvLDv~~gstanGT~Vq~~~~ngs~~Q~W~i~~~~~~pi~~GtY~Ivn~~sg 429 (841)
T 2vse_A 352 G-SNNQY-WTIEKNVNGFYKFRNLSDPSKILDLKDGNTLNKTPLVVSSENSSSSQEWLIEKTNYQTVKDGTYQVSSKLNE 429 (841)
T ss_dssp S-CGGGC-EEEEECTTSCEEEEESSCTTCEEEEGGGCCSTTCBEEEECCCSCGGGCEEEEECCCCCSCSEEEEEEETTEE
T ss_pred C-CcccE-EEEEECCCceEEEEecCCCceEEEeccCcCCCCCEEEEecCCCCcccceecccccccccccceEEEEEccCC
Confidence 3 34454 7888888888888887 555554443 122333444445567889999865321 233678888888
Q ss_pred -ceEeecCCCCCCCceEEecCCCCCCCccEEEccCC-----cEEe--ccCceeeeC--CCCcEEEecCCCCCCCeEEEec
Q psy1765 687 -LCLTSKVDKTKGSPLVLKKCDELSKTQRWSKTDKS-----ELVL--AELLCLDAG--ATKPKLTKCHEMGGSQEWNFVL 756 (867)
Q Consensus 687 -~CLd~~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~~-----~~~~--~s~~CLD~~--g~~v~~~~C~~~~~~Q~W~~~~ 756 (867)
+|||+.+. +.|++++|++ ..+|+|+|+..+ .++. .+++|||+. |+.++++.|++. .+|+|.+..
T Consensus 430 ~kvLDv~~~----snV~~w~~~g-~~nQqW~~~~~g~~G~Y~I~n~~~sg~~Ldv~~~g~~v~~~~~~g~-~~QqW~l~~ 503 (841)
T 2vse_A 430 NKVIEQIST----NKVHIFSNSD-KENQVWNLIYNPILKAYKIKSLKYPNYSLAWDSNNTRTIVAATGDY-NDQYWLIER 503 (841)
T ss_dssp EEEEEEETT----TEEEEEECCC-CGGGCEEEEEETTTTEEEEEESSCTTCEEEECTTTTCBEEEECSCC-GGGEEEEEE
T ss_pred CEEEEecCC----CCeEEecCCC-CccccEEEeeccccceEEEEecCCCceEEEecCCCCcEEEecCCCC-cccEEEEEE
Confidence 89999532 2599999998 899999998654 2333 579999986 668999999874 599999974
Q ss_pred --CCeeeeec-CCCCceeecCCCCC--CCeEEEEecCCCCCceEEEecCC
Q psy1765 757 --RDKTPIYS-PATGTCLGSKNRLE--NTVIVMEMCAQHKDTSWDLVPVG 801 (867)
Q Consensus 757 --~~~~~i~n-~~sg~CLd~~~~~~--g~~v~~~~C~~~~~Q~W~~~~~~ 801 (867)
++.+.|++ ..||+|||+.+.++ |+.|++|+|+++++|+|+|.+++
T Consensus 504 ~gdG~y~I~n~~~Sg~~LDV~~~stanGt~v~~w~~ng~~nQqW~~~~~~ 553 (841)
T 2vse_A 504 NEDNTYIIRNYENRKIVLDLSNGSTTDGNGLLGFEFHGGINQRWIIKPFS 553 (841)
T ss_dssp CTTSCEEEEESSSTTEEEEEGGGCCSTTCCEEEEECCCCGGGCEEEEECC
T ss_pred CCCCeEEEEEcCCCCceEecCCCCCCCCCeEEEeCCCCCccCcceEecCc
Confidence 56667999 78999999976554 99999999999999999998863
|
| >1knl_A Endo-1,4-beta-xylanase A; carbohydrate binding module, CBM13 xylan binding domain, LEC ricin B-like, beta-trefoil fold, hydrolase; 1.20A {Streptomyces lividans} SCOP: b.42.2.1 PDB: 1knm_A* 1mc9_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=6.6e-20 Score=174.08 Aligned_cols=118 Identities=25% Similarity=0.487 Sum_probs=102.7
Q ss_pred ceEEEecCCCceEee-cCCCCCCCceEEecCCCCCCCccEEEccCCcEEeccCceeeeC----CCCcEEEecCCCCCCCe
Q psy1765 677 HFHIRLSGTDLCLTS-KVDKTKGSPLVLKKCDELSKTQRWSKTDKSELVLAELLCLDAG----ATKPKLTKCHEMGGSQE 751 (867)
Q Consensus 677 ~~~i~~~~sg~CLd~-~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~~~~~~~s~~CLD~~----g~~v~~~~C~~~~~~Q~ 751 (867)
.+.|++..+++|||+ +....+|+.|.+++|++ ..+|+|.++..+.++..+++|||+. |+.|++|+|++. .+|+
T Consensus 6 ~g~i~n~~sg~cld~~~~~~~~g~~v~~~~c~~-~~~Q~w~~~~~g~i~~~s~~CLd~~~~~~g~~v~~~~c~~~-~~Q~ 83 (130)
T 1knl_A 6 GGQIKGVGSGRCLDVPDASTSDGTQLQLWDCHS-GTNQQWAATDAGELRVYGDKCLDAAGTSNGSKVQIYSCWGG-DNQK 83 (130)
T ss_dssp CBCCEETTTCCEEECGGGCCCTTCBCEEECCCS-CGGGCBEECTTSCEEETTTEEEEESCSSTTCBEEEEECCCC-GGGC
T ss_pred eeEEEECCCCCEEECCCCCCCCCCEEEEEecCC-CcccEEEEeCCCcEEECCCcEEeCCCCCCCCEEEEEecCCC-Ccce
Confidence 378999999999999 44456788999999998 7899999999898888889999984 679999999985 5999
Q ss_pred EEEecCCeeeeecCCCCceeecCCCCC--CCeEEEEecCCCCCceEEEe
Q psy1765 752 WNFVLRDKTPIYSPATGTCLGSKNRLE--NTVIVMEMCAQHKDTSWDLV 798 (867)
Q Consensus 752 W~~~~~~~~~i~n~~sg~CLd~~~~~~--g~~v~~~~C~~~~~Q~W~~~ 798 (867)
|.+..++. |+|..+++|||+.+.++ |+.|++++|+++.+|+|.|+
T Consensus 84 W~~~~~g~--i~~~~sg~cLdv~~~~~~~g~~v~~~~c~~~~~Q~W~~~ 130 (130)
T 1knl_A 84 WRLNSDGS--VVGVQSGLCLDAVGNGTANGTLIQLYTCSNGSNQRWTRT 130 (130)
T ss_dssp EEECTTSC--EEETTTCCEEEEGGGCCSTTCBEEEECCCCCGGGCEECC
T ss_pred EEECCCCe--EEECCCCceEECCCCCCCCCCEEEEEeCCCCccceEEEC
Confidence 99997663 89999999999975433 88999999999999999874
|
| >2vlc_A Cinnamomin, type 2 ribosome-inactivating protein cinnamomin III; ribosome inhibiting proteins, toxin, hydrolase, plant defense; HET: AS5 BMA XYP XYS; 2.95A {Cinnamomum camphora} | Back alignment and structure |
|---|
Probab=99.81 E-value=1e-19 Score=214.20 Aligned_cols=194 Identities=16% Similarity=0.262 Sum_probs=142.1
Q ss_pred ceEEeeceeeecC------CCccEEEeCCC-CCCCcceeeeeeeccceeeecccCcccccCCC-hhhhhhhhhccccC--
Q psy1765 592 ELVLAELLCLDAG------ATKPKLTKCHE-MGGSQEYWCWLRCKSFKWYLDNVYPEMILPSD-DEDRLKKKWAQVEQ-- 661 (867)
Q Consensus 592 ~i~~~~~~CLd~~------g~~v~l~~C~~-~~~~Q~~w~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-- 661 (867)
.|+..+++|||+. |+.+++|+|+. .+.+|. |.|. .+|.+... ..|++.. ...........+..
T Consensus 319 ~I~~~sg~CLDv~g~~~~~G~~v~l~~C~~~g~~nQ~-W~~~--~~G~ir~~----g~CLdv~g~~~G~~V~~~~C~g~~ 391 (570)
T 2vlc_A 319 RISGRNGLCVRVRDGKYNNGNPIQLWPCKQNSDVNQL-WTLR--RDGTIRSN----GKCLTTNGYSAGDYVMIYDCRTPV 391 (570)
T ss_dssp CEEEGGGCEEEEGGGCCSTTCBEEEECCCCSCCGGGC-EEEC--TTSBEEET----TEEEEESCSSTTCBEEEECCCSSC
T ss_pred EEECCCCCeEEcCCCCCCCCceEEEEecCCCCChhce-EEEc--CCceEEEC----CeEEcccCCCCCceEEEEecCCCC
Confidence 5555678999975 45689999933 356676 5665 56766653 2333222 11112222222333
Q ss_pred CCCCcccccccccccceEEEecCCCceEeecCCCCCCCceEEecCCCCCCCccEEEccCCc-----EEeccCceeeeCCC
Q psy1765 662 PKFQPWYSRARNYTSHFHIRLSGTDLCLTSKVDKTKGSPLVLKKCDELSKTQRWSKTDKSE-----LVLAELLCLDAGAT 736 (867)
Q Consensus 662 ~~~q~W~~~~~~~~~~~~i~~~~sg~CLd~~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~~~-----~~~~s~~CLD~~g~ 736 (867)
...|.|.+.. .+.|+|..+|+|||+.+. .+|+.+++++|++ +.+|+|.++.... +...+++|||+.|+
T Consensus 392 ~~nQ~W~~~~-----~G~i~n~~Sg~CLDv~~~-~~g~~v~~~~C~g-~~nQ~W~~~~~~~~~~~~i~~~s~~CLD~~g~ 464 (570)
T 2vlc_A 392 TAASIWQFWA-----NGTIINPQSALVLSAESG-NPRTTLTVQADIY-ASRQGWLAGNNTEPFVTSIVGFNDLCMQANGD 464 (570)
T ss_dssp CGGGBCEECT-----TSCEEETTTTEEEECSSS-STTCBCEEECCCC-CGGGCEEECSCCSCEEECEECGGGEEEEEETT
T ss_pred CCCceEEEcc-----CCeEEECCCCceEecCCC-cceeeEEEEccCC-CCcceEEEeecccccceecccccceecccccc
Confidence 6789998754 478999999999998433 5688999999998 8899999986432 22347899999999
Q ss_pred CcEEEecCCCCCCCeEEEecCCeeeeec-CCCCceeec-CCCCCCCeEEEEec-CCCCCceEEEecCC
Q psy1765 737 KPKLTKCHEMGGSQEWNFVLRDKTPIYS-PATGTCLGS-KNRLENTVIVMEMC-AQHKDTSWDLVPVG 801 (867)
Q Consensus 737 ~v~~~~C~~~~~~Q~W~~~~~~~~~i~n-~~sg~CLd~-~~~~~g~~v~~~~C-~~~~~Q~W~~~~~~ 801 (867)
.|++++|++++.+|+|.+..++. |++ ..+++||++ .+...|+.|++++| +++.+|+|.|...+
T Consensus 465 ~v~l~~C~g~~~~Q~W~~~~dG~--ir~~~~~~~CLd~~~~~~~G~~V~l~~C~~~~~~Q~W~~~~~G 530 (570)
T 2vlc_A 465 AMWVVECESSKAEQKWALYPDGS--IRPHQDRDRCLTSTDNHSQGSIIIISSCSPGSEGQRWVFMNDG 530 (570)
T ss_dssp EEEEEECCTTCSTTCEEECTTSC--EEETTCTTEEEEESCTTSTTCBEEEEESTTCCGGGCCEECTTS
T ss_pred ceEEEecCCCCcCcEEEEcCCCe--EEECCCCCeEeccccccCCCCEEEEEeCCCCCCCCEEEEcCCC
Confidence 99999999987799999998776 454 478999999 44445889999999 78888999998654
|
| >2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.4e-19 Score=211.21 Aligned_cols=143 Identities=24% Similarity=0.513 Sum_probs=117.4
Q ss_pred eeeccceeeecccCcccccCCChhhhhhhhhccccCCCCCcccccccccccceEEEecCCCceEeecCCCCCCCceEEec
Q psy1765 626 LRCKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSGTDLCLTSKVDKTKGSPLVLKK 705 (867)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~~~~~~~~~i~~~~sg~CLd~~~~~~~g~~v~l~~ 705 (867)
+.|++|.||+.+++|++..|.. +....|.|++ +++|||+.+ ..+|+.+.+++
T Consensus 351 l~c~~f~w~l~~v~p~~~~p~~-------------------------~~~~~g~i~~--~~~Cld~~~-~~~~~~v~l~~ 402 (501)
T 2ffu_A 351 LSCKPFKWYLENVYPELRVPDH-------------------------QDIAFGALQQ--GTNCLDTLG-HFADGVVGVYE 402 (501)
T ss_dssp TTCCCHHHHHHHTCTTSCCCCC-------------------------CCCCEEEEEE--TTEEEECTT-CCTTCCCEEEE
T ss_pred cCCCCeEEehhccccccccccc-------------------------cccccccccc--cCccccccC-CCCCCEEEEEE
Confidence 3589999999999999876653 1122478887 899999843 34567899999
Q ss_pred CCCCCCCccEEEccCCcEEeccCceeeeC----CCCcEEEecCCCCCCCeEEEecCCeeeeecCCCCceeecCCCCCCCe
Q psy1765 706 CDELSKTQRWSKTDKSELVLAELLCLDAG----ATKPKLTKCHEMGGSQEWNFVLRDKTPIYSPATGTCLGSKNRLENTV 781 (867)
Q Consensus 706 C~~~~~~Q~W~~~~~~~~~~~s~~CLD~~----g~~v~~~~C~~~~~~Q~W~~~~~~~~~i~n~~sg~CLd~~~~~~g~~ 781 (867)
|++++.+|+|.++..++++. +++|||+. |+.|++|+|++.+.+|+|.+..+++. |+|+.||+|||+.. ..|+.
T Consensus 403 C~g~~~nQ~w~~~~~g~i~~-~~~Cld~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~~~~-i~~~~sg~CLd~~~-~~~~~ 479 (501)
T 2ffu_A 403 CHNAGGNQEWALTKEKSVKH-MDLCLTVVDRAPGSLIKLQGCRENDSRQKWEQIEGNSK-LRHVGSNLCLDSRT-AKSGG 479 (501)
T ss_dssp CCSSCGGGCEEECTTSCEEE-TTEEEECSCCSTTCBCEEEECCTTCGGGCEEEETTTTE-EEETTSSEEEECTT-GGGTS
T ss_pred cCCCCcceEEEEecCCceee-ccccceeccCCCCCeEEEEecCCCCcCceEEEECCCCe-EEeCCCCeEEeeec-CCCCe
Confidence 99966689999999998885 58999985 67999999998667999999974443 89999999999873 34778
Q ss_pred EEEEecCCCCCceEEEec
Q psy1765 782 IVMEMCAQHKDTSWDLVP 799 (867)
Q Consensus 782 v~~~~C~~~~~Q~W~~~~ 799 (867)
|++++|+++++|+|+|..
T Consensus 480 ~~~~~C~~~~~Q~W~~~~ 497 (501)
T 2ffu_A 480 LSVEVCGPALSQQWKFTL 497 (501)
T ss_dssp CEEEECCSCGGGCCEEEE
T ss_pred EEEEeCCCCCcceEEEeC
Confidence 999999999999999964
|
| >2dry_A 29-kDa galactose-binding lectin; earthworm lumbricus terrestris, sialic acid, in vitro evolution, beta-trefoil fold, sugar binding protein; HET: PGE; 1.80A {Lumbricus terrestris} PDB: 2drz_A* 2ds0_A* 2zqn_A* 2zqo_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=3.9e-19 Score=168.79 Aligned_cols=119 Identities=17% Similarity=0.160 Sum_probs=97.4
Q ss_pred eeeecCCCceecccCCC-CCCCcEEEEecCCCC--CCceeeecCCCceEE-eeceeeecCCCccEEEeCCCCCCCcceee
Q psy1765 549 HIRLSSTDLCLTSKVDK-TKGSPLVLKKCDELS--KTQHWSKTDKSELVL-AELLCLDAGATKPKLTKCHEMGGSQEYWC 624 (867)
Q Consensus 549 ~ir~~~~~~CLD~~~~~-~~g~~v~l~~C~~~~--~~Q~w~~t~~~~i~~-~~~~CLd~~g~~v~l~~C~~~~~~Q~~w~ 624 (867)
.|++..+|+|||+.++. .+|++|.+|+|++.. .+|+|+++.+|+|+. .+++|||+.|+.+++++|++. .+|+||
T Consensus 5 ~i~n~~SGk~LDV~g~s~~~Ga~v~~w~~~~~~~~~nQ~W~~~~~g~i~~~~sg~cLD~~G~~v~~~~c~g~-~~Qqw~- 82 (130)
T 2dry_A 5 YIKSELNGKVLDIGGQNPAPGSKIITWDQKKGPTAVNQLWYTDQQGVIRSKLNDFAIDASHEQIETQPFDPN-NPKRAW- 82 (130)
T ss_dssp EEEETTTSCEEEEGGGCCSTTCBEEEECCCCSGGGGGGCEEECTTCCEEETTTCCEEECSSSSCEEECCCTT-CGGGCE-
T ss_pred EEEECCCCCEEEECCCCcCCCceEEEEEecCCCCchheEEEEecceeEEEccCCeeEEecCCceEEEecCCC-cceeEE-
Confidence 68889999999999864 579999999999763 489999999999985 468999999999999999985 455553
Q ss_pred eeeeccceeeecccCcccccCCChhhhhhhhhccccCCCCCcccccccccccceEEE-ecCCCceEee-cCCCCCCCceE
Q psy1765 625 WLRCKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIR-LSGTDLCLTS-KVDKTKGSPLV 702 (867)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~~~~~~~~~i~-~~~sg~CLd~-~~~~~~g~~v~ 702 (867)
+. .++.++ +..+++|||+ +.++.+|+.|+
T Consensus 83 ~~-------------------------------------------------~~g~~~~~~~sg~cLDv~g~st~~G~~v~ 113 (130)
T 2dry_A 83 IV-------------------------------------------------SGNTIAQLSDRDNVLGVIKSDKGASAHIC 113 (130)
T ss_dssp EE-------------------------------------------------ETTEEEETTEEEEEEEEECCSSSSCCEEE
T ss_pred Ee-------------------------------------------------CCCcEEEecccCceEEccCCCCCCCCEEE
Confidence 11 123343 4678999999 55677899999
Q ss_pred EecCCCCCCCccEEEcc
Q psy1765 703 LKKCDELSKTQRWSKTD 719 (867)
Q Consensus 703 l~~C~~~~~~Q~W~~~~ 719 (867)
+++|++ +++|+|.|+.
T Consensus 114 ~w~~~g-~~nQ~W~~es 129 (130)
T 2dry_A 114 AWKQHG-GPNQKFIIES 129 (130)
T ss_dssp EEECCC-SGGGCEEEEE
T ss_pred EECCCC-CccceEEEEe
Confidence 999998 8999999974
|
| >3pg0_A Threefoil; symmetric design, beta-trefoil, engineered module, sugar BIN NOVO protein; HET: BTB GOL; 1.62A {Artificial gene} | Back alignment and structure |
|---|
Probab=99.77 E-value=8.5e-19 Score=173.66 Aligned_cols=122 Identities=14% Similarity=0.233 Sum_probs=101.6
Q ss_pred ceEEEecCCCceEee-cCCCCCCCceEEecCCCCCCCccEEEccCCc----E-EeccCceeeeC------CCCcEEEecC
Q psy1765 677 HFHIRLSGTDLCLTS-KVDKTKGSPLVLKKCDELSKTQRWSKTDKSE----L-VLAELLCLDAG------ATKPKLTKCH 744 (867)
Q Consensus 677 ~~~i~~~~sg~CLd~-~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~~~----~-~~~s~~CLD~~------g~~v~~~~C~ 744 (867)
.+.|++..+++|||+ +.+..+|+.+++++|++ +.+|+|.+...+. + ...+++|||+. |+.|++|+|+
T Consensus 28 ~y~i~n~~sg~cLdv~~~~~~~g~~v~~~~c~~-~~~Q~W~~~~~~~g~y~i~~~~sg~cLdv~~~~~~~G~~v~~~~c~ 106 (165)
T 3pg0_A 28 YYKLVARHSGKALDVENASTSDGANVIQYSYSG-GDNQQWRLVDLGDGYYKLVARHSGKALDVENASTSDGANVIQYSYS 106 (165)
T ss_dssp EEEEEETTTCCEEEEGGGCCSTTCBEEEECCCC-CGGGCEEEEEEETTEEEEEETTTCCEEEEGGGCCSTTCBEEEECCC
T ss_pred EEEEEECCCCCEEEeCCCCCCCCCEEEEECCCC-CccceEEEEECCCCEEEEEECCCCCEEEeCCCCCCCCCEEEEEcCC
Confidence 378999999999999 44567789999999999 7799999986432 2 24579999974 6689999999
Q ss_pred CCCCCCeEEEecC--CeeeeecCCCCceeecCCCCC--CCeEEEEecCCCCCceEEEecC
Q psy1765 745 EMGGSQEWNFVLR--DKTPIYSPATGTCLGSKNRLE--NTVIVMEMCAQHKDTSWDLVPV 800 (867)
Q Consensus 745 ~~~~~Q~W~~~~~--~~~~i~n~~sg~CLd~~~~~~--g~~v~~~~C~~~~~Q~W~~~~~ 800 (867)
+. .+|+|.+... +.+.|+|..+|+|||+.+.++ |+.|++|+|+++++|+|.|+++
T Consensus 107 ~~-~~Q~W~~~~~g~g~~~i~~~~sg~cLdv~~~~~~~G~~v~~~~c~g~~nQ~W~~~~v 165 (165)
T 3pg0_A 107 GG-DNQQWRLVDLGDGYYKLVARHSGKALDVENASTSDGANVIQYSYSGGDNQQWRLVDL 165 (165)
T ss_dssp CC-GGGCEEEEECSSSCEEEEETTTCCEEEEGGGCCSTTCBEEEECCCCCGGGCEEEEEC
T ss_pred CC-CccEEEEEECCCCEEEEEECCCCcEEEcCCCCCCCCCEEEEeCCCCCccceEEEEEC
Confidence 86 5999999854 445699999999999976543 8999999999999999999864
|
| >3phz_A Ricin B-related lectin; beta trefoil, saccharide binding lectin, 2,6-sialyl-lactosam sugar binding protein; HET: NAG GAL SIA; 1.70A {Polyporus squamosus} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.6e-18 Score=181.08 Aligned_cols=128 Identities=16% Similarity=0.089 Sum_probs=100.6
Q ss_pred ceEEEecCCC-ceEee-cCCCCCCCc-eEEecCCCCCCCccEEEccCCc-----E-EeccCceeeeC------CCCcEEE
Q psy1765 677 HFHIRLSGTD-LCLTS-KVDKTKGSP-LVLKKCDELSKTQRWSKTDKSE-----L-VLAELLCLDAG------ATKPKLT 741 (867)
Q Consensus 677 ~~~i~~~~sg-~CLd~-~~~~~~g~~-v~l~~C~~~~~~Q~W~~~~~~~-----~-~~~s~~CLD~~------g~~v~~~ 741 (867)
.+.|+++.++ +|||+ +.++++|++ |++++|+....+|+|.+...+. + ...+++|||+. |+.|++|
T Consensus 8 ~Y~I~N~~SGnKcLDV~g~STanGt~~Vqqw~c~nG~~nQqW~l~~~G~G~~Y~I~N~~SGKcLDV~g~sTadGa~V~qW 87 (286)
T 3phz_A 8 IYYIASAYVANTRLALSEDSSANKSPDVIISSDAVDPLNNLWLIEPVGEADTYTVRNAFAGSYMDLAGHAATDGTAIIGY 87 (286)
T ss_dssp EEEEEESSSTTEEEEECC----CCCCBEEEEETTCCCGGGCEEEEECSSTTEEEEEETTTCCEEEEGGGCCSTTEEEEEE
T ss_pred EEEEEEcCCCCeEEEcCCCCCCCCCceEEEEeCCCCChHHEEEEEECCCCcEEEEEECCCCcEEEeCCCcCCCCCeEEEe
Confidence 3689999999 99999 567788999 9999985447899999986432 2 24579999975 5699999
Q ss_pred ecCCCCCCCeEEEec-CCeeeeecCCCCceeecCCC-C--CCCeEEEEecC-CCCCceEEEecCCccccc
Q psy1765 742 KCHEMGGSQEWNFVL-RDKTPIYSPATGTCLGSKNR-L--ENTVIVMEMCA-QHKDTSWDLVPVGSLVEG 806 (867)
Q Consensus 742 ~C~~~~~~Q~W~~~~-~~~~~i~n~~sg~CLd~~~~-~--~g~~v~~~~C~-~~~~Q~W~~~~~~~~~e~ 806 (867)
+|+++ .+|+|.+.. ++.++|+|++||+|||+.+. . .|+ |++|+++ ++++|+|+|++++.+..+
T Consensus 88 ~~nGg-~NQqW~l~~~~G~y~I~n~~SGkcLDV~~gsttanGa-V~qWt~~tgg~NQqW~~~~vs~tg~~ 155 (286)
T 3phz_A 88 RPTGG-DNQKWIISQINDVWKIKSKETGTFVTLLNGDGGGTGT-VVGWQNITNNTSQNWTFQKLSQTGAN 155 (286)
T ss_dssp CCCCC-GGGCEEEEESSSCEEEEETTTCCEEEEETC---CCCE-EEEESCCCSSCTTCEEEEECEEEHHH
T ss_pred CCCCC-hhcEEEEEcCCCeEEEEECCCCcEEEeCCCCcCCCce-EEEccCCCCCccCcEEEEEccCCccc
Confidence 99985 599999975 45567999999999996543 3 388 9999965 688999999999776644
|
| >3a07_A Actinohivin; carbohydrate-binding module family 13, antiviral protein, LE; 1.19A {Actinomycete} | Back alignment and structure |
|---|
Probab=99.75 E-value=4.2e-18 Score=159.02 Aligned_cols=109 Identities=20% Similarity=0.235 Sum_probs=93.2
Q ss_pred eEEEecCCCceEeecCCCCCCCceEEecCCCCCCCccEEEccCCcEEec-cCceeeeCCC-CcEEEecCCCCCCCeEEEe
Q psy1765 678 FHIRLSGTDLCLTSKVDKTKGSPLVLKKCDELSKTQRWSKTDKSELVLA-ELLCLDAGAT-KPKLTKCHEMGGSQEWNFV 755 (867)
Q Consensus 678 ~~i~~~~sg~CLd~~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~~~~~~~-s~~CLD~~g~-~v~~~~C~~~~~~Q~W~~~ 755 (867)
+.|++..+++|||+.+. +.+.+++|++ ..+|+|.++..+.++.. +++|||+.+. .|++|+|++. .+|+|.+.
T Consensus 7 ~~i~n~~sg~CLd~~~~----~~v~~~~C~g-~~~Q~W~~~~~g~i~~~~sg~CLd~~~~~~v~~~~C~g~-~~Q~W~~~ 80 (118)
T 3a07_A 7 VTIRNAQTGRLLDSNYN----GNVYTLPANG-GNYQRWTGPGDGTVRNAQTGRCLDSNYDGAVYTLPCNGG-SYQKWLFY 80 (118)
T ss_dssp ECEEETTTCCEEEECTT----CCEEEECCCC-CGGGCEEECSSSCCEETTTCCEEEECTTCBEEEECCCCC-GGGCEEEC
T ss_pred EEEEECCCCcEEecCCC----CeEEEECCCC-CccCEEEECCCEEEEECCCCcEEecCCCCeEEEEccCCC-ccceEEEe
Confidence 67999999999998432 3689999998 88999999988877754 7999999754 7999999985 59999998
Q ss_pred cCCeeeeecCCCCceeecCCCCCCCeEEEEecCCCCCceEEE
Q psy1765 756 LRDKTPIYSPATGTCLGSKNRLENTVIVMEMCAQHKDTSWDL 797 (867)
Q Consensus 756 ~~~~~~i~n~~sg~CLd~~~~~~g~~v~~~~C~~~~~Q~W~~ 797 (867)
.++. |+|..||+|||+.+.. + |++++|+++++|+|.|
T Consensus 81 ~~g~--i~~~~sg~cLdv~~~~--~-v~~~~c~g~~~Q~W~~ 117 (118)
T 3a07_A 81 SNGY--IQNVETGRVLDSNYNG--N-VYTLPANGGNYQKWYT 117 (118)
T ss_dssp TTSC--EEETTTCCEEEECTTC--C-EEEECCCCCGGGCEEE
T ss_pred CCCE--EEECCCCcEEEcCCCC--E-EEEEcCCCChhceEec
Confidence 7763 8999999999998642 3 9999999999999987
|
| >3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.2e-18 Score=207.34 Aligned_cols=141 Identities=23% Similarity=0.328 Sum_probs=118.2
Q ss_pred eeccceeeecccCcccccCCChhhhhhhhhccccCCCCCcccccccccccceEEEecCCCceEee-cCCCCCCCceEEec
Q psy1765 627 RCKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSGTDLCLTS-KVDKTKGSPLVLKK 705 (867)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~~~~~~~~~i~~~~sg~CLd~-~~~~~~g~~v~l~~ 705 (867)
.|++|+||+++++|++..+.. ...+.|+|..+++|||+ +....+|+.|++++
T Consensus 465 ncksF~wy~~~~~P~~~~~~~---------------------------~~~g~i~n~~sg~CLDv~~~~~~~g~~v~l~~ 517 (614)
T 3a21_A 465 NTLALSGGPATEGITVRPLPG---------------------------TNGALVTGKQSGRCADIYNNTITNGTQAELWD 517 (614)
T ss_dssp EEEEEESSSCEEEEEEEECGG---------------------------GCBBCCEETTTCCEEECGGGCCCTTCBCEEEC
T ss_pred ceeeecccccccCceeeccCC---------------------------CceEEEEECCCCcEEEeCCCCCCCCCEEEEEC
Confidence 599999999988887643211 01167999999999999 44556789999999
Q ss_pred CCCCCCCccEEEccCCcEEeccCceeeeC------CCCcEEEecCCCCCCCeEEEecCCeeeeecCCCCceeecCCCCC-
Q psy1765 706 CDELSKTQRWSKTDKSELVLAELLCLDAG------ATKPKLTKCHEMGGSQEWNFVLRDKTPIYSPATGTCLGSKNRLE- 778 (867)
Q Consensus 706 C~~~~~~Q~W~~~~~~~~~~~s~~CLD~~------g~~v~~~~C~~~~~~Q~W~~~~~~~~~i~n~~sg~CLd~~~~~~- 778 (867)
|++ +.+|+|.++..+.++..+++|||+. |+.|++|+|++. .+|+|.+..++. |+|+.||+|||+.+.++
T Consensus 518 C~g-~~nQ~w~~~~~g~ir~~~~~CLdv~~~~~~~G~~V~l~~C~g~-~nQ~W~~~~~g~--i~~~~sg~CLdv~~~st~ 593 (614)
T 3a21_A 518 CNG-GPNQSWTYTSRKELVLYGNKCLDAYNLGTTNGTKVVIWDCNGQ-ANQKWNINSDGT--ITNVNAGLCLDAYNAATA 593 (614)
T ss_dssp CCC-CGGGCBEECTTSCEEETTTEEEEEGGGCCSTTCBEEEEECCCC-GGGCEEECTTSC--EEETTTCCEEEEGGGCCS
T ss_pred CCC-CCCceEEEECCceEEECCCcEEECCCCcCCCCceEEEeCCCCC-CccEEEEcCCCe--EEECCCCceEecCCCCCC
Confidence 999 8899999999999988778999985 679999999985 599999997763 89999999999976433
Q ss_pred -CCeEEEEecCCCCCceEEEe
Q psy1765 779 -NTVIVMEMCAQHKDTSWDLV 798 (867)
Q Consensus 779 -g~~v~~~~C~~~~~Q~W~~~ 798 (867)
|+.|++++|+++++|+|.|.
T Consensus 594 ~g~~v~~~~C~g~~~Q~W~~~ 614 (614)
T 3a21_A 594 NGTSLVLWSCGTGDNQKWTVT 614 (614)
T ss_dssp TTCBEEEECCCSCGGGCEECC
T ss_pred CCCEEEEEcCCCCcccEEeeC
Confidence 89999999999999999874
|
| >1knl_A Endo-1,4-beta-xylanase A; carbohydrate binding module, CBM13 xylan binding domain, LEC ricin B-like, beta-trefoil fold, hydrolase; 1.20A {Streptomyces lividans} SCOP: b.42.2.1 PDB: 1knm_A* 1mc9_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=4.6e-18 Score=161.32 Aligned_cols=120 Identities=26% Similarity=0.441 Sum_probs=97.8
Q ss_pred cceeeeecCCCceecccCCC-CCCCcEEEEecCCCCCCceeeecCCCceEEeeceeeecC----CCccEEEeCCCCCCCc
Q psy1765 546 SHFHIRLSSTDLCLTSKVDK-TKGSPLVLKKCDELSKTQHWSKTDKSELVLAELLCLDAG----ATKPKLTKCHEMGGSQ 620 (867)
Q Consensus 546 ~~g~ir~~~~~~CLD~~~~~-~~g~~v~l~~C~~~~~~Q~w~~t~~~~i~~~~~~CLd~~----g~~v~l~~C~~~~~~Q 620 (867)
+.|+|++..+++|||+.++. ..|++|.+|+|++. .+|+|+++.+|+|+..+++|||+. |+.++++.|++. .+|
T Consensus 5 ~~g~i~n~~sg~cld~~~~~~~~g~~v~~~~c~~~-~~Q~w~~~~~g~i~~~s~~CLd~~~~~~g~~v~~~~c~~~-~~Q 82 (130)
T 1knl_A 5 DGGQIKGVGSGRCLDVPDASTSDGTQLQLWDCHSG-TNQQWAATDAGELRVYGDKCLDAAGTSNGSKVQIYSCWGG-DNQ 82 (130)
T ss_dssp CCBCCEETTTCCEEECGGGCCCTTCBCEEECCCSC-GGGCBEECTTSCEEETTTEEEEESCSSTTCBEEEEECCCC-GGG
T ss_pred ceeEEEECCCCCEEECCCCCCCCCCEEEEEecCCC-cccEEEEeCCCcEEECCCcEEeCCCCCCCCEEEEEecCCC-Ccc
Confidence 34567778999999998743 47999999999984 799999999999998788999984 456899999984 666
Q ss_pred ceeeeeeeccceeeecccCcccccCCChhhhhhhhhccccCCCCCcccccccccccceEEEecCCCceEee-cCCCCCCC
Q psy1765 621 EYWCWLRCKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSGTDLCLTS-KVDKTKGS 699 (867)
Q Consensus 621 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~~~~~~~~~i~~~~sg~CLd~-~~~~~~g~ 699 (867)
.| .| . .+++|++..+++|||+ +.+..+|+
T Consensus 83 ~W-~~--------------------------------------------~-----~~g~i~~~~sg~cLdv~~~~~~~g~ 112 (130)
T 1knl_A 83 KW-RL--------------------------------------------N-----SDGSVVGVQSGLCLDAVGNGTANGT 112 (130)
T ss_dssp CE-EE--------------------------------------------C-----TTSCEEETTTCCEEEEGGGCCSTTC
T ss_pred eE-EE--------------------------------------------C-----CCCeEEECCCCceEECCCCCCCCCC
Confidence 64 32 1 1367899999999999 44556788
Q ss_pred ceEEecCCCCCCCccEEEc
Q psy1765 700 PLVLKKCDELSKTQRWSKT 718 (867)
Q Consensus 700 ~v~l~~C~~~~~~Q~W~~~ 718 (867)
.|++++|++ +.+|+|.|+
T Consensus 113 ~v~~~~c~~-~~~Q~W~~~ 130 (130)
T 1knl_A 113 LIQLYTCSN-GSNQRWTRT 130 (130)
T ss_dssp BEEEECCCC-CGGGCEECC
T ss_pred EEEEEeCCC-CccceEEEC
Confidence 999999998 889999874
|
| >2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A | Back alignment and structure |
|---|
Probab=99.71 E-value=1.6e-17 Score=189.87 Aligned_cols=117 Identities=26% Similarity=0.495 Sum_probs=103.2
Q ss_pred eEEEecCCCceEee-cCCCCCCCceEEecCCCCCCCccEEEccCCcEEeccCceeeeC----CCCcEEEecCCCCCCCeE
Q psy1765 678 FHIRLSGTDLCLTS-KVDKTKGSPLVLKKCDELSKTQRWSKTDKSELVLAELLCLDAG----ATKPKLTKCHEMGGSQEW 752 (867)
Q Consensus 678 ~~i~~~~sg~CLd~-~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~~~~~~~s~~CLD~~----g~~v~~~~C~~~~~~Q~W 752 (867)
+.|++..+++|||+ +.+..+|+.|.+++|++ +.+|+|.++..+.++..+++|||+. |+.|++|+|+++ .+|+|
T Consensus 313 ~~i~n~~sg~CLDv~~~~~~~g~~v~~~~C~g-~~nQ~W~~~~~g~i~~~sg~CLdv~~~~~G~~v~~~~C~g~-~nQ~W 390 (436)
T 2d1z_A 313 GQIKGVGSGRCLDVPNASTTDGTQVQLYDCHS-ATNQQWTYTDAGELRVYGDKCLDAAGTGNGTKVQIYSCWGG-DNQKW 390 (436)
T ss_dssp CCEEETTTCCEEECGGGCCCTTEECEEECCCS-CGGGCCEECTTSCEEETTTEEEEESSSSTTCBEEEEECCCC-GGGCE
T ss_pred eEEEECCCCceEeccCCcCCCCceEEEEecCC-CCceEEEEecCceEEECCCeEEEECCCCCCceEEEEecCCC-CCceE
Confidence 68999999999999 44556788999999999 7899999999999988889999985 679999999985 59999
Q ss_pred EEecCCeeeeecCCCCceeecCCCCC--CCeEEEEecCCCCCceEEEe
Q psy1765 753 NFVLRDKTPIYSPATGTCLGSKNRLE--NTVIVMEMCAQHKDTSWDLV 798 (867)
Q Consensus 753 ~~~~~~~~~i~n~~sg~CLd~~~~~~--g~~v~~~~C~~~~~Q~W~~~ 798 (867)
.+..++. |+|..||+|||+.+.++ |+.|++++|+++++|+|.|+
T Consensus 391 ~~~~~G~--i~~~~sg~cLdv~~~s~~~g~~v~~~~c~g~~~Q~W~~~ 436 (436)
T 2d1z_A 391 RLNSDGS--IVGVQSGLCLDAVGGGTANGTLIQLYSCSNGSNQRWTRT 436 (436)
T ss_dssp EECTTSC--EEETTTCCEEEEGGGCCSTTCBEEEECCCCCGGGCEEEC
T ss_pred EECCCCe--EEECCCCCeEecCCCCCCCCCEEEEEeCCCCCCceEEeC
Confidence 9987664 89999999999976433 89999999999999999984
|
| >3ef2_A Agglutinin, lectin; beta-trefoil, calcium-binding, carbohydrate-binding, sugar-binding, sugar binding protein; HET: FUC GAL GLA; 1.80A {Marasmius oreades} PDB: 2iho_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=4.8e-17 Score=173.33 Aligned_cols=129 Identities=14% Similarity=0.114 Sum_probs=104.8
Q ss_pred ceEEEecCCCceEee-cCCCCCCCceEEecCCC--CCCCccEEEcc-C---CcEE---eccCceeeeC------CCCcEE
Q psy1765 677 HFHIRLSGTDLCLTS-KVDKTKGSPLVLKKCDE--LSKTQRWSKTD-K---SELV---LAELLCLDAG------ATKPKL 740 (867)
Q Consensus 677 ~~~i~~~~sg~CLd~-~~~~~~g~~v~l~~C~~--~~~~Q~W~~~~-~---~~~~---~~s~~CLD~~------g~~v~~ 740 (867)
.+.|++..+|+|||+ +.+.++|++|++++|++ ...+|+|++.. . +... ..+++|||+. |+.|++
T Consensus 7 ~Y~I~N~~SGk~LDV~g~stanGa~Vqqw~~~g~ng~~nQqW~~~~~~G~~G~Y~I~n~~SGkcLDV~~~stanGt~V~q 86 (293)
T 3ef2_A 7 IYHIENAGVPSAIDLKDGSSSDGTPIVGWQFTPDTINWHQLWLAEPIPNVADTFTLCNLFSGTYMDLYNGSSEAGTAVNG 86 (293)
T ss_dssp EEEEEESSSSCEEEEGGGCCSTTEEEEEECCCTTSCCTTCEEEEEECTTSTTEEEEEETTTCCEEEEGGGCCSTTEEEEE
T ss_pred EEEEEECCCCCEEEcCCCCCCCCcEEEEeecCCCCCCccEEEEEeeccCCCceEEEEECCCCCEEecCCCCCCCCCEEEE
Confidence 378999999999999 55678899999999754 25899999987 2 3322 4579999985 669999
Q ss_pred Ee----cCCCCCCCeEEEecC---CeeeeecCCCCceeecCCCCC--CCeEEEEe---cCCCCCceEEEecCCccccch
Q psy1765 741 TK----CHEMGGSQEWNFVLR---DKTPIYSPATGTCLGSKNRLE--NTVIVMEM---CAQHKDTSWDLVPVGSLVEGE 807 (867)
Q Consensus 741 ~~----C~~~~~~Q~W~~~~~---~~~~i~n~~sg~CLd~~~~~~--g~~v~~~~---C~~~~~Q~W~~~~~~~~~e~~ 807 (867)
|+ |++ .+|+|.+... +.++|+++.||+|||+.+.++ |+.|++|+ |+++++|+|+|++++....+-
T Consensus 87 w~~~~~~~g--~nQqW~l~~~~g~G~y~I~n~~SGk~LDV~g~stanGt~V~qw~~~~~~g~~nQqW~l~~~s~~~~~i 163 (293)
T 3ef2_A 87 WQGTAFTTN--PHQLWTIKKSSDGTSYKIQNYGSKTFVDLVNGDSSDGAKIAGWTGTWDEGNPHQKWYFNRMSVSSAEA 163 (293)
T ss_dssp ECCCTTCCC--GGGCEEEEECTTSSSEEEEETTTCCEEEEGGGCCSTTEEEEEECCCSSCCCGGGCEEEEECEEEHHHH
T ss_pred eccCCCCCC--CCcEEEEEEeCCCCEEEEEECCCCcEEEeCCCCCCCCCEEEEEeccCCCCCcccEEEEEecCCCccee
Confidence 99 765 3999999854 456799999999999976544 99999999 999999999999987665433
|
| >3nbc_A Ricin B-like lectin; lactose, sugar BIND protein; HET: LAT; 1.01A {Clitocybe nebularis} PDB: 3nbd_A* 3nbe_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=2.2e-16 Score=152.17 Aligned_cols=118 Identities=10% Similarity=0.141 Sum_probs=99.4
Q ss_pred eEEEecC-CCceEee-cCCCCCCCceEEecCCCCCCCcc----EEEccCC-----cEEe-ccCceeeeC------CCCcE
Q psy1765 678 FHIRLSG-TDLCLTS-KVDKTKGSPLVLKKCDELSKTQR----WSKTDKS-----ELVL-AELLCLDAG------ATKPK 739 (867)
Q Consensus 678 ~~i~~~~-sg~CLd~-~~~~~~g~~v~l~~C~~~~~~Q~----W~~~~~~-----~~~~-~s~~CLD~~------g~~v~ 739 (867)
+.|++.. +|+|||+ +.++++|++|++|+|++ ..+|+ |+|...+ ...+ +.++|||+. |+.|+
T Consensus 7 Y~I~n~~~sgk~lDv~~~sta~Gt~V~~w~~~g-~~nQ~~~~~W~~~~~~~~~~g~y~i~n~G~~Ldv~~~~ta~Gt~v~ 85 (148)
T 3nbc_A 7 YNITNVAYTNRLIDLTGSNPAENTLIIGHHLNK-TPSGYGNQQWTLVQLPHTTIYTMQAVNPQSYVRVRDDNLVDGAALV 85 (148)
T ss_dssp EEEEESSCTTCEEEEGGGCCSTTEEEEEECCCS-TTTCCGGGCEEEEECTTSSEEEEEESSSCCEEEEGGGCCSTTCBEE
T ss_pred EEEEEecCCCCeEECCCCcCCCCcEEEEeCCCC-ChhheeecEEEEEECCCcccceEEEEECCcEEEccCCCCCCCcEEe
Confidence 7899999 9999999 55677899999999999 88999 9998743 3332 228999964 67899
Q ss_pred EEecCCCCCCCeEEEec---CCeeeeecCCCCceeecCCCCCCCeEEEEecCC-CCCceEEEecCC
Q psy1765 740 LTKCHEMGGSQEWNFVL---RDKTPIYSPATGTCLGSKNRLENTVIVMEMCAQ-HKDTSWDLVPVG 801 (867)
Q Consensus 740 ~~~C~~~~~~Q~W~~~~---~~~~~i~n~~sg~CLd~~~~~~g~~v~~~~C~~-~~~Q~W~~~~~~ 801 (867)
+|++ +|+|.+.. ++.++|+++.|++|||+.+...|+.|++|+|++ +++|+|.|+++.
T Consensus 86 ~~~~-----~q~W~i~~~~~~G~y~I~~~~sg~~Ldv~stanGt~i~~w~~~~g~~nQ~W~~~~v~ 146 (148)
T 3nbc_A 86 GSQQ-----PTPVSIESAGNSGQFRIKIPNLGLALTLPSDANSTPIVLGEVDETSTNQLWAFESVS 146 (148)
T ss_dssp EESS-----CCCEEEEECSSTTCEEEECTTSSEEEECCCSSTTEECEEEECCSSCGGGCEEEEECC
T ss_pred cCCC-----CcEEEEEEccCCCeEEEEeCCCCeEEEeecCCCCcEEEEecCCCCCCCcEEEEEecc
Confidence 9875 58999986 566679999999999999666699999999999 899999999875
|
| >3vsf_A Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactanase, sugar binding protein; 2.76A {Clostridium thermocellum} PDB: 3vsz_A* 3vt0_A* 3vt1_B* 3vt2_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=1.3e-16 Score=186.69 Aligned_cols=126 Identities=17% Similarity=0.139 Sum_probs=102.7
Q ss_pred eEEEecCCCceEee-cCCCCCCCceEEecCCCCCCCccEEEccCC--c--E-EeccCceeeeC------CCCcEEEecCC
Q psy1765 678 FHIRLSGTDLCLTS-KVDKTKGSPLVLKKCDELSKTQRWSKTDKS--E--L-VLAELLCLDAG------ATKPKLTKCHE 745 (867)
Q Consensus 678 ~~i~~~~sg~CLd~-~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~~--~--~-~~~s~~CLD~~------g~~v~~~~C~~ 745 (867)
++|+|..+|+|||+ +.+..+|+.|++++|++ +.+|+|.+...+ . + ...+++|||+. |+.|++|+|++
T Consensus 363 y~i~n~~sg~cLdv~~~~~~~G~~v~~~~c~g-~~~Q~W~~~~~g~g~y~i~n~~sg~cLdv~~~~~~~G~~v~~~~c~g 441 (526)
T 3vsf_A 363 YKLVNKNSGKVLDVLDGSVDNAAQIVQWTDNG-SLSQQWYLVDVGGGYKKIVNVKSGRALDVKDESKEDGGVLIQYTSNG 441 (526)
T ss_dssp EEEEETTTCCEEEEGGGCCSTTEEEEEECCCC-CGGGCEEEEECSTTEEEEEESSSCCEEEEGGGCCSTTEEEEEECCCC
T ss_pred EEEEECCCCceEEecCCCCCCCcEEEEccCCC-CcceEEEEEECCCCEEEEEECCCCCEEEeCCCCCCCCCEEEEecCCC
Confidence 68999999999999 44567888999999998 889999998654 2 2 24579999975 56899999998
Q ss_pred CCCCCeEEEec--CCeeeeecCCCCceeecCCCCC--CCeEEEEecCCCCCceEEEecCCcccc
Q psy1765 746 MGGSQEWNFVL--RDKTPIYSPATGTCLGSKNRLE--NTVIVMEMCAQHKDTSWDLVPVGSLVE 805 (867)
Q Consensus 746 ~~~~Q~W~~~~--~~~~~i~n~~sg~CLd~~~~~~--g~~v~~~~C~~~~~Q~W~~~~~~~~~e 805 (867)
+ .+|+|.+.. ++..+|+|+.||+|||+.+.++ |+.|++++|+++++|+|+|++++....
T Consensus 442 ~-~nQ~W~~~~~g~g~y~i~~~~sg~cLdv~~~s~~~G~~v~~~~c~g~~nQ~W~~~~v~~~~~ 504 (526)
T 3vsf_A 442 G-YNQHWKFTDIGDGYYKISSRHCGKLIDVRKWSTEDGGIIQQWSDAGGTNQHWKLVLVSSPEP 504 (526)
T ss_dssp C-GGGCEEEEEEETTEEEEEESSSCCEEEEGGGCCSTTEEEEEECCCCCGGGCEEEEEC-----
T ss_pred C-cccEEEEEECCCCeEEEEECCCCCEEEeCCCCCCCCCEEEEEcCCCCccCeEEEEecCCCCC
Confidence 6 599999974 4555699999999999976543 899999999999999999998876543
|
| >3a07_A Actinohivin; carbohydrate-binding module family 13, antiviral protein, LE; 1.19A {Actinomycete} | Back alignment and structure |
|---|
Probab=99.65 E-value=3.4e-16 Score=146.06 Aligned_cols=110 Identities=19% Similarity=0.252 Sum_probs=87.8
Q ss_pred eeeeecCCCceecccCCCCCCCcEEEEecCCCCCCceeeecCCCceEE-eeceeeecCCC-ccEEEeCCCCCCCcceeee
Q psy1765 548 FHIRLSSTDLCLTSKVDKTKGSPLVLKKCDELSKTQHWSKTDKSELVL-AELLCLDAGAT-KPKLTKCHEMGGSQEYWCW 625 (867)
Q Consensus 548 g~ir~~~~~~CLD~~~~~~~g~~v~l~~C~~~~~~Q~w~~t~~~~i~~-~~~~CLd~~g~-~v~l~~C~~~~~~Q~~w~~ 625 (867)
++|++..+++|||+.+. +.|.+|+|++ ..+|+|+++.+++|+. .+++|||+.+. .+++++|++ +.+|.| .|
T Consensus 7 ~~i~n~~sg~CLd~~~~----~~v~~~~C~g-~~~Q~W~~~~~g~i~~~~sg~CLd~~~~~~v~~~~C~g-~~~Q~W-~~ 79 (118)
T 3a07_A 7 VTIRNAQTGRLLDSNYN----GNVYTLPANG-GNYQRWTGPGDGTVRNAQTGRCLDSNYDGAVYTLPCNG-GSYQKW-LF 79 (118)
T ss_dssp ECEEETTTCCEEEECTT----CCEEEECCCC-CGGGCEEECSSSCCEETTTCCEEEECTTCBEEEECCCC-CGGGCE-EE
T ss_pred EEEEECCCCcEEecCCC----CeEEEECCCC-CccCEEEECCCEEEEECCCCcEEecCCCCeEEEEccCC-CccceE-EE
Confidence 46788899999998753 3699999997 5799999999999985 46899999754 589999997 456664 22
Q ss_pred eeeccceeeecccCcccccCCChhhhhhhhhccccCCCCCcccccccccccceEEEecCCCceEeecCCCCCCCceEEec
Q psy1765 626 LRCKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSGTDLCLTSKVDKTKGSPLVLKK 705 (867)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~~~~~~~~~i~~~~sg~CLd~~~~~~~g~~v~l~~ 705 (867)
...++|++..+++|||+... + .|++++
T Consensus 80 -------------------------------------------------~~~g~i~~~~sg~cLdv~~~---~-~v~~~~ 106 (118)
T 3a07_A 80 -------------------------------------------------YSNGYIQNVETGRVLDSNYN---G-NVYTLP 106 (118)
T ss_dssp -------------------------------------------------CTTSCEEETTTCCEEEECTT---C-CEEEEC
T ss_pred -------------------------------------------------eCCCEEEECCCCcEEEcCCC---C-EEEEEc
Confidence 12367999999999998432 2 399999
Q ss_pred CCCCCCCccEEEc
Q psy1765 706 CDELSKTQRWSKT 718 (867)
Q Consensus 706 C~~~~~~Q~W~~~ 718 (867)
|++ +.+|+|.+.
T Consensus 107 c~g-~~~Q~W~~~ 118 (118)
T 3a07_A 107 ANG-GNYQKWYTG 118 (118)
T ss_dssp CCC-CGGGCEEEC
T ss_pred CCC-ChhceEecC
Confidence 998 899999873
|
| >3pg0_A Threefoil; symmetric design, beta-trefoil, engineered module, sugar BIN NOVO protein; HET: BTB GOL; 1.62A {Artificial gene} | Back alignment and structure |
|---|
Probab=99.64 E-value=5.6e-16 Score=153.31 Aligned_cols=122 Identities=14% Similarity=0.256 Sum_probs=97.1
Q ss_pred eeeeecCCCceecccCC-CCCCCcEEEEecCCCCCCceeeecCCCceEEeeceeeecCCCccEEEeCCCCCCCcceeeee
Q psy1765 548 FHIRLSSTDLCLTSKVD-KTKGSPLVLKKCDELSKTQHWSKTDKSELVLAELLCLDAGATKPKLTKCHEMGGSQEYWCWL 626 (867)
Q Consensus 548 g~ir~~~~~~CLD~~~~-~~~g~~v~l~~C~~~~~~Q~w~~t~~~~i~~~~~~CLd~~g~~v~l~~C~~~~~~Q~~w~~~ 626 (867)
..|++..+++|||+.++ ..+|++|.+|+|++.. +|+|.++..+.
T Consensus 29 y~i~n~~sg~cLdv~~~~~~~g~~v~~~~c~~~~-~Q~W~~~~~~~---------------------------------- 73 (165)
T 3pg0_A 29 YKLVARHSGKALDVENASTSDGANVIQYSYSGGD-NQQWRLVDLGD---------------------------------- 73 (165)
T ss_dssp EEEEETTTCCEEEEGGGCCSTTCBEEEECCCCCG-GGCEEEEEEET----------------------------------
T ss_pred EEEEECCCCCEEEeCCCCCCCCCEEEEECCCCCc-cceEEEEECCC----------------------------------
Confidence 46888899999999864 3579999999999854 88888754211
Q ss_pred eeccceeeecccCcccccCCChhhhhhhhhccccCCCCCcccccccccccceEEEecCCCceEee-cCCCCCCCceEEec
Q psy1765 627 RCKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSGTDLCLTS-KVDKTKGSPLVLKK 705 (867)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~~~~~~~~~i~~~~sg~CLd~-~~~~~~g~~v~l~~ 705 (867)
....|++..+++|||+ +.+..+|+.+++++
T Consensus 74 -------------------------------------------------g~y~i~~~~sg~cLdv~~~~~~~G~~v~~~~ 104 (165)
T 3pg0_A 74 -------------------------------------------------GYYKLVARHSGKALDVENASTSDGANVIQYS 104 (165)
T ss_dssp -------------------------------------------------TEEEEEETTTCCEEEEGGGCCSTTCBEEEEC
T ss_pred -------------------------------------------------CEEEEEECCCCCEEEeCCCCCCCCCEEEEEc
Confidence 0146888899999998 44567789999999
Q ss_pred CCCCCCCccEEEccCC----cEE-eccCceeeeC------CCCcEEEecCCCCCCCeEEEe
Q psy1765 706 CDELSKTQRWSKTDKS----ELV-LAELLCLDAG------ATKPKLTKCHEMGGSQEWNFV 755 (867)
Q Consensus 706 C~~~~~~Q~W~~~~~~----~~~-~~s~~CLD~~------g~~v~~~~C~~~~~~Q~W~~~ 755 (867)
|++ +.+|+|.+...+ .++ ..+++|||+. |+.|++|+|+++ .+|+|.+.
T Consensus 105 c~~-~~~Q~W~~~~~g~g~~~i~~~~sg~cLdv~~~~~~~G~~v~~~~c~g~-~nQ~W~~~ 163 (165)
T 3pg0_A 105 YSG-GDNQQWRLVDLGDGYYKLVARHSGKALDVENASTSDGANVIQYSYSGG-DNQQWRLV 163 (165)
T ss_dssp CCC-CGGGCEEEEECSSSCEEEEETTTCCEEEEGGGCCSTTCBEEEECCCCC-GGGCEEEE
T ss_pred CCC-CCccEEEEEECCCCEEEEEECCCCcEEEcCCCCCCCCCEEEEeCCCCC-ccceEEEE
Confidence 999 799999999765 344 4579999985 568999999985 59999986
|
| >3aj6_A Main hemagglutinin component; toxin, beta-trefoil; HET: NGA; 1.48A {Clostridium botulinum} PDB: 1qxm_A 3aj5_A* 2ehm_A* 2ehi_A* 2ehn_A* 3ah1_A* 3ah2_A* 3ah4_A* 2e4m_A | Back alignment and structure |
|---|
Probab=99.63 E-value=2.6e-15 Score=161.06 Aligned_cols=193 Identities=13% Similarity=0.097 Sum_probs=140.3
Q ss_pred eceeeecC-CCccEEEeCCCCCCCcceeeeeeec-cceeeecccC-cccccCCChhhhhhhhhccccCCCCCcccccccc
Q psy1765 597 ELLCLDAG-ATKPKLTKCHEMGGSQEYWCWLRCK-SFKWYLDNVY-PEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARN 673 (867)
Q Consensus 597 ~~~CLd~~-g~~v~l~~C~~~~~~Q~~w~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~~~ 673 (867)
.+++||.. ++.|++|.|++. .+|+ |++.+-. .|.+.+.++. +..++.-.+.. .............|.|.+....
T Consensus 23 ~n~vl~~~~~~~v~~~~~~~~-~~Q~-W~~~yd~~~g~Y~I~n~~~~~lvL~~~~~~-~~V~~~~~~g~~~Q~W~l~~~~ 99 (286)
T 3aj6_A 23 TNKVLDKISQSEVKLWNKLSG-ANQK-WRLIYDTNKQAYKIKVMDNTSLILTWNAPL-SSVSVKTDTNGDNQYWYLLQNY 99 (286)
T ss_dssp TTEEEEECSSSCEEEEECCCC-GGGC-EEEEEETTTTEEEEEESSSSCCEEEECTTS-SCEEEECCCCCGGGCEEEEECT
T ss_pred CceEEeccCCCcEEEecCCCC-cCCe-EEEEEcCCCCeEEEEECCCCcEEEEccCCC-CCEEEeCCCCCcceEEEEEEeC
Confidence 46888885 668999999975 5555 6877654 4788888875 33322111111 1222233445678999987531
Q ss_pred cccceEEEec-CCCceEeecCCCCCCCceEEecCCCCCCCccEEEcc-------CCcEE--e--ccCceeeeC--CCCcE
Q psy1765 674 YTSHFHIRLS-GTDLCLTSKVDKTKGSPLVLKKCDELSKTQRWSKTD-------KSELV--L--AELLCLDAG--ATKPK 739 (867)
Q Consensus 674 ~~~~~~i~~~-~sg~CLd~~~~~~~g~~v~l~~C~~~~~~Q~W~~~~-------~~~~~--~--~s~~CLD~~--g~~v~ 739 (867)
-.....|++. .+++|||+.. |+.+++++|++ +.+|+|.+.+ ++... . ++++|||+. |+.|+
T Consensus 100 ~dG~y~i~n~~~s~~vLdv~~----gs~v~~~~~~g-~~~Q~w~i~~~~~~~i~dG~Y~i~~~~~sgk~lDv~~~g~~V~ 174 (286)
T 3aj6_A 100 ISRNVIIRNYMNPNLVLQYNI----DDTLMVSTQTS-SSNQFFKFSNCIYEALNNRNCKLQTQLNSDRFLSKNLNSQIIV 174 (286)
T ss_dssp TTCCEEEEESSCTTEEEEECT----TSCEEEEECCS-CGGGCEEEEEHHHHHHTTEEEEEEETTCTTCEEEECTTSSBEE
T ss_pred CCCEEEEEECCCCceEEEecC----CCeEEEEecCC-CCceeEEEeccccccCCCceEEEEecCCCceEEEecCCCceEE
Confidence 1234678985 7899999952 34899999998 8999999976 44433 2 357999985 77999
Q ss_pred EEecCCCCCCCeEEEec---CCeeeeecCCCCceeecCCCCCCCeEEEEecCCCCCceEEEec
Q psy1765 740 LTKCHEMGGSQEWNFVL---RDKTPIYSPATGTCLGSKNRLENTVIVMEMCAQHKDTSWDLVP 799 (867)
Q Consensus 740 ~~~C~~~~~~Q~W~~~~---~~~~~i~n~~sg~CLd~~~~~~g~~v~~~~C~~~~~Q~W~~~~ 799 (867)
+|+|++. .+|+|.|.. .+.++|++..+++||+..+ ..|+.|++++|+++++|+|.+++
T Consensus 175 ~w~~~g~-~nQ~W~~~~~~~~~~y~i~~~~s~~~l~~~s-~~g~~v~~~~~~g~~~Q~W~~~~ 235 (286)
T 3aj6_A 175 LWQWIDS-SRQKWIIEYNETKSAYTLKCQENNRYLTWIQ-NSNNYVETYQSTDSLIQYWNINY 235 (286)
T ss_dssp EECCCCC-GGGCEEEEEETTTTEEEEEETTTCCEEEECC-STTCBEEEECCCSSGGGCEEEEE
T ss_pred EeCCCCC-ccceEEEEECCCCCeEEEEECCCCEEEeccC-CCCCEEEEEeCCCCcccEEEEEe
Confidence 9999985 499999863 3556799999999999864 34789999999999999999976
|
| >3phz_A Ricin B-related lectin; beta trefoil, saccharide binding lectin, 2,6-sialyl-lactosam sugar binding protein; HET: NAG GAL SIA; 1.70A {Polyporus squamosus} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.3e-15 Score=159.29 Aligned_cols=124 Identities=14% Similarity=0.109 Sum_probs=95.8
Q ss_pred eeeecCCC-ceecccCCC-CCCCc-EEEEecCCCCCCceeeecCCCceEEeeceeeecCCCccEEEeCCCCCCCcceeee
Q psy1765 549 HIRLSSTD-LCLTSKVDK-TKGSP-LVLKKCDELSKTQHWSKTDKSELVLAELLCLDAGATKPKLTKCHEMGGSQEYWCW 625 (867)
Q Consensus 549 ~ir~~~~~-~CLD~~~~~-~~g~~-v~l~~C~~~~~~Q~w~~t~~~~i~~~~~~CLd~~g~~v~l~~C~~~~~~Q~~w~~ 625 (867)
.|++..++ +|||+.++. ++|++ |++|+|.....+|+|+++..+.-
T Consensus 10 ~I~N~~SGnKcLDV~g~STanGt~~Vqqw~c~nG~~nQqW~l~~~G~G-------------------------------- 57 (286)
T 3phz_A 10 YIASAYVANTRLALSEDSSANKSPDVIISSDAVDPLNNLWLIEPVGEA-------------------------------- 57 (286)
T ss_dssp EEEESSSTTEEEEECC----CCCCBEEEEETTCCCGGGCEEEEECSST--------------------------------
T ss_pred EEEEcCCCCeEEEcCCCCCCCCCceEEEEeCCCCChHHEEEEEECCCC--------------------------------
Confidence 68888888 999998754 57999 99999976667899987654320
Q ss_pred eeeccceeeecccCcccccCCChhhhhhhhhccccCCCCCcccccccccccceEEEecCCCceEee-cCCCCCCCceEEe
Q psy1765 626 LRCKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSGTDLCLTS-KVDKTKGSPLVLK 704 (867)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~~~~~~~~~i~~~~sg~CLd~-~~~~~~g~~v~l~ 704 (867)
..++|+++.+|+|||+ +.++++|+.|+++
T Consensus 58 --------------------------------------------------~~Y~I~N~~SGKcLDV~g~sTadGa~V~qW 87 (286)
T 3phz_A 58 --------------------------------------------------DTYTVRNAFAGSYMDLAGHAATDGTAIIGY 87 (286)
T ss_dssp --------------------------------------------------TEEEEEETTTCCEEEEGGGCCSTTEEEEEE
T ss_pred --------------------------------------------------cEEEEEECCCCcEEEeCCCcCCCCCeEEEe
Confidence 0146889999999999 5567789999999
Q ss_pred cCCCCCCCccEEEccC-C---cEEeccCceeee-------CCCCcEEEecCCCCCCCeEEEec
Q psy1765 705 KCDELSKTQRWSKTDK-S---ELVLAELLCLDA-------GATKPKLTKCHEMGGSQEWNFVL 756 (867)
Q Consensus 705 ~C~~~~~~Q~W~~~~~-~---~~~~~s~~CLD~-------~g~~v~~~~C~~~~~~Q~W~~~~ 756 (867)
+|++ +.+|+|++... + .....+++|||+ +|+ |++|+++.++++|+|.+.+
T Consensus 88 ~~nG-g~NQqW~l~~~~G~y~I~n~~SGkcLDV~~gsttanGa-V~qWt~~tgg~NQqW~~~~ 148 (286)
T 3phz_A 88 RPTG-GDNQKWIISQINDVWKIKSKETGTFVTLLNGDGGGTGT-VVGWQNITNNTSQNWTFQK 148 (286)
T ss_dssp CCCC-CGGGCEEEEESSSCEEEEETTTCCEEEEETC---CCCE-EEEESCCCSSCTTCEEEEE
T ss_pred CCCC-ChhcEEEEEcCCCeEEEEECCCCcEEEeCCCCcCCCce-EEEccCCCCCccCcEEEEE
Confidence 9999 89999999763 3 223568999993 366 9999966345699999985
|
| >2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A | Back alignment and structure |
|---|
Probab=99.62 E-value=7.2e-16 Score=176.27 Aligned_cols=119 Identities=29% Similarity=0.489 Sum_probs=98.5
Q ss_pred ceeeeecCCCceecccCCC-CCCCcEEEEecCCCCCCceeeecCCCceEEeeceeeecC----CCccEEEeCCCCCCCcc
Q psy1765 547 HFHIRLSSTDLCLTSKVDK-TKGSPLVLKKCDELSKTQHWSKTDKSELVLAELLCLDAG----ATKPKLTKCHEMGGSQE 621 (867)
Q Consensus 547 ~g~ir~~~~~~CLD~~~~~-~~g~~v~l~~C~~~~~~Q~w~~t~~~~i~~~~~~CLd~~----g~~v~l~~C~~~~~~Q~ 621 (867)
.|+|++..+++|||+.++. .+|++|++|+|++ +.+|+|+++.+|+|+..+++|||+. |+.++++.|++ +++|+
T Consensus 312 ~~~i~n~~sg~CLDv~~~~~~~g~~v~~~~C~g-~~nQ~W~~~~~g~i~~~sg~CLdv~~~~~G~~v~~~~C~g-~~nQ~ 389 (436)
T 2d1z_A 312 GGQIKGVGSGRCLDVPNASTTDGTQVQLYDCHS-ATNQQWTYTDAGELRVYGDKCLDAAGTGNGTKVQIYSCWG-GDNQK 389 (436)
T ss_dssp -CCEEETTTCCEEECGGGCCCTTEECEEECCCS-CGGGCCEECTTSCEEETTTEEEEESSSSTTCBEEEEECCC-CGGGC
T ss_pred ceEEEECCCCceEeccCCcCCCCceEEEEecCC-CCceEEEEecCceEEECCCeEEEECCCCCCceEEEEecCC-CCCce
Confidence 4678888999999998754 5799999999998 4699999999999998788999986 45689999998 45666
Q ss_pred eeeeeeeccceeeecccCcccccCCChhhhhhhhhccccCCCCCcccccccccccceEEEecCCCceEee-cCCCCCCCc
Q psy1765 622 YWCWLRCKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSGTDLCLTS-KVDKTKGSP 700 (867)
Q Consensus 622 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~~~~~~~~~i~~~~sg~CLd~-~~~~~~g~~ 700 (867)
| .+ ..+++|+|..||+|||+ +.++.+|+.
T Consensus 390 W-~~-------------------------------------------------~~~G~i~~~~sg~cLdv~~~s~~~g~~ 419 (436)
T 2d1z_A 390 W-RL-------------------------------------------------NSDGSIVGVQSGLCLDAVGGGTANGTL 419 (436)
T ss_dssp E-EE-------------------------------------------------CTTSCEEETTTCCEEEEGGGCCSTTCB
T ss_pred E-EE-------------------------------------------------CCCCeEEECCCCCeEecCCCCCCCCCE
Confidence 4 22 12367999999999999 445667899
Q ss_pred eEEecCCCCCCCccEEEc
Q psy1765 701 LVLKKCDELSKTQRWSKT 718 (867)
Q Consensus 701 v~l~~C~~~~~~Q~W~~~ 718 (867)
|++++|++ +.+|+|.++
T Consensus 420 v~~~~c~g-~~~Q~W~~~ 436 (436)
T 2d1z_A 420 IQLYSCSN-GSNQRWTRT 436 (436)
T ss_dssp EEEECCCC-CGGGCEEEC
T ss_pred EEEEeCCC-CCCceEEeC
Confidence 99999998 789999974
|
| >3ef2_A Agglutinin, lectin; beta-trefoil, calcium-binding, carbohydrate-binding, sugar-binding, sugar binding protein; HET: FUC GAL GLA; 1.80A {Marasmius oreades} PDB: 2iho_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=2.8e-15 Score=159.69 Aligned_cols=162 Identities=12% Similarity=0.105 Sum_probs=116.6
Q ss_pred eeeecCCCceecccCC-CCCCCcEEEEecCCC--CCCceeeecC-CCceEEeeceeeecCCCccEEEeCCCCCCCcceee
Q psy1765 549 HIRLSSTDLCLTSKVD-KTKGSPLVLKKCDEL--SKTQHWSKTD-KSELVLAELLCLDAGATKPKLTKCHEMGGSQEYWC 624 (867)
Q Consensus 549 ~ir~~~~~~CLD~~~~-~~~g~~v~l~~C~~~--~~~Q~w~~t~-~~~i~~~~~~CLd~~g~~v~l~~C~~~~~~Q~~w~ 624 (867)
.|++..+++|||+.++ .++|++|++|+||+. ..+|+|+++. .|. .
T Consensus 9 ~I~N~~SGk~LDV~g~stanGa~Vqqw~~~g~ng~~nQqW~~~~~~G~------------------------~------- 57 (293)
T 3ef2_A 9 HIENAGVPSAIDLKDGSSSDGTPIVGWQFTPDTINWHQLWLAEPIPNV------------------------A------- 57 (293)
T ss_dssp EEEESSSSCEEEEGGGCCSTTEEEEEECCCTTSCCTTCEEEEEECTTS------------------------T-------
T ss_pred EEEECCCCCEEEcCCCCCCCCcEEEEeecCCCCCCccEEEEEeeccCC------------------------C-------
Confidence 6888899999999875 457999999999853 4578887764 221 0
Q ss_pred eeeeccceeeecccCcccccCCChhhhhhhhhccccCCCCCcccccccccccceEEEecCCCceEee-cCCCCCCCceEE
Q psy1765 625 WLRCKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSGTDLCLTS-KVDKTKGSPLVL 703 (867)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~~~~~~~~~i~~~~sg~CLd~-~~~~~~g~~v~l 703 (867)
....|++..+|+|||+ +.++.+|+.|++
T Consensus 58 ---------------------------------------------------G~Y~I~n~~SGkcLDV~~~stanGt~V~q 86 (293)
T 3ef2_A 58 ---------------------------------------------------DTFTLCNLFSGTYMDLYNGSSEAGTAVNG 86 (293)
T ss_dssp ---------------------------------------------------TEEEEEETTTCCEEEEGGGCCSTTEEEEE
T ss_pred ---------------------------------------------------ceEEEEECCCCCEEecCCCCCCCCCEEEE
Confidence 0146888999999999 456788999999
Q ss_pred ec----CCCCCCCccEEEccC---CcE---EeccCceeeeC------CCCcEEEe---cCCCCCCCeEEEecCCee--ee
Q psy1765 704 KK----CDELSKTQRWSKTDK---SEL---VLAELLCLDAG------ATKPKLTK---CHEMGGSQEWNFVLRDKT--PI 762 (867)
Q Consensus 704 ~~----C~~~~~~Q~W~~~~~---~~~---~~~s~~CLD~~------g~~v~~~~---C~~~~~~Q~W~~~~~~~~--~i 762 (867)
++ |++ . +|+|.+... +.. ...+++|||+. |+.|++|+ |+++ .+|+|.+.+.+.. .+
T Consensus 87 w~~~~~~~g-~-nQqW~l~~~~g~G~y~I~n~~SGk~LDV~g~stanGt~V~qw~~~~~~g~-~nQqW~l~~~s~~~~~i 163 (293)
T 3ef2_A 87 WQGTAFTTN-P-HQLWTIKKSSDGTSYKIQNYGSKTFVDLVNGDSSDGAKIAGWTGTWDEGN-PHQKWYFNRMSVSSAEA 163 (293)
T ss_dssp ECCCTTCCC-G-GGCEEEEECTTSSSEEEEETTTCCEEEEGGGCCSTTEEEEEECCCSSCCC-GGGCEEEEECEEEHHHH
T ss_pred eccCCCCCC-C-CcEEEEEEeCCCCEEEEEECCCCcEEEeCCCCCCCCCEEEEEeccCCCCC-cccEEEEEecCCCccee
Confidence 99 765 4 999999875 222 24589999975 66999999 8875 5999999854221 01
Q ss_pred -----ecCCCCceeecCCCCCCCeEE--------EEecCCCCCceEE
Q psy1765 763 -----YSPATGTCLGSKNRLENTVIV--------MEMCAQHKDTSWD 796 (867)
Q Consensus 763 -----~n~~sg~CLd~~~~~~g~~v~--------~~~C~~~~~Q~W~ 796 (867)
.++.-+.++++-.. .+..+. +|.|++-++|.|+
T Consensus 164 ~~~l~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~~w~~~~l~~~~~~ 209 (293)
T 3ef2_A 164 QAAIARNPHIHGTYRGYIL-DGEYLVLPNATFTQIWKDSGLPGSKWR 209 (293)
T ss_dssp HHHHHTCSCEEEEEEEECC-CSEEECCCHHHHHHHHHTSSCTTCCCB
T ss_pred eeeeccCCCcCCCeeEEcC-CceEEecCCcchhheeeccCCCCcccc
Confidence 23333356665432 233344 7899999899997
|
| >1ybi_A HA33A, HA33/A, non-toxin haemagglutinin HA34; beta-trefoil; 1.50A {Clostridium botulinum} | Back alignment and structure |
|---|
Probab=99.54 E-value=5.3e-14 Score=151.09 Aligned_cols=196 Identities=12% Similarity=0.100 Sum_probs=140.2
Q ss_pred eeceeeecCCCccEEEeCCCCCCCcceeeeeeecc-ceeeeccc---CcccccCCChhhhhhhhhccccCCCCCcccccc
Q psy1765 596 AELLCLDAGATKPKLTKCHEMGGSQEYWCWLRCKS-FKWYLDNV---YPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRA 671 (867)
Q Consensus 596 ~~~~CLd~~g~~v~l~~C~~~~~~Q~~w~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~ 671 (867)
+.+++||..++.|.+|..++. .+|. |.+.+..+ |.+.+.++ .+..++.-.. ...............|.|.+..
T Consensus 18 ~~~~~l~~~~~~v~~~~~~~~-~~Q~-w~~~y~~~~~~Y~I~n~~~~~~~l~L~~~~-~~~~v~~~~~~~~~~Q~W~l~k 94 (288)
T 1ybi_A 18 DTNLFFYQVAGNVSLFQQTRN-YLER-WRLIYDSNKAAYKIKSMDIHNTNLVLTWNA-PTHNISTQQDSNADNQYWLLLK 94 (288)
T ss_dssp EEEEEEEEETTEEEEECCCCS-GGGC-EEEEEETTTTEEEEEECCCSSSCEEEEECT-TSSBEEEEECCCCGGGCEEEEE
T ss_pred CCCeEEecCCCcEEEecCCCc-cccE-EEEEEeCCCCEEEEEEeccCCCceEEEecC-CCceEEEeCCCCccceEEEEEE
Confidence 457899988778999987764 4555 68887664 78889988 3444432111 1112223334456779999763
Q ss_pred cccccceEEEec-CCCceEeecCCCCCCCceEEecCCCCCCCccEEEcc-------CCcEEe----ccCceeeeC---CC
Q psy1765 672 RNYTSHFHIRLS-GTDLCLTSKVDKTKGSPLVLKKCDELSKTQRWSKTD-------KSELVL----AELLCLDAG---AT 736 (867)
Q Consensus 672 ~~~~~~~~i~~~-~sg~CLd~~~~~~~g~~v~l~~C~~~~~~Q~W~~~~-------~~~~~~----~s~~CLD~~---g~ 736 (867)
..-.....|++. .+++|||+. +.+| .++++++++ +.+|+|++.+ .+..++ .+++|||+. |+
T Consensus 95 ~~~dG~y~I~n~~~s~~vLdv~--t~~g-~v~~~~~ng-s~~Q~w~i~~~~~~~~~~G~y~I~~~~s~~~vldv~~~~g~ 170 (288)
T 1ybi_A 95 DIGNNSFIIASYKNPNLVLYAD--TVAR-NLKLSTLNN-SNYIKFIIEDYIISDLNNFTCKISPILDLNKVVQQVDVTNL 170 (288)
T ss_dssp ETTTTEEEEEESSCTTCEEEEE--TTTT-EEEEECCCS-SGGGCEEEEEHHHHHHTTCEEEEEETTCTTEEEEESSSSCC
T ss_pred ECCCCeEEEEECCCCCeeEEEE--CCCC-cEEEeCCCC-CcCceEEEccccccCCCCceEEEEEccCCCeEEEeeCCCCC
Confidence 211234678887 579999996 4566 999999998 8999999983 354442 236999985 67
Q ss_pred CcEEEecCCCCCCCeEEEec---CCeeeeec-CCCCceeecCCCCCCCeEEEEecCCC--CCceEEEecC
Q psy1765 737 KPKLTKCHEMGGSQEWNFVL---RDKTPIYS-PATGTCLGSKNRLENTVIVMEMCAQH--KDTSWDLVPV 800 (867)
Q Consensus 737 ~v~~~~C~~~~~~Q~W~~~~---~~~~~i~n-~~sg~CLd~~~~~~g~~v~~~~C~~~--~~Q~W~~~~~ 800 (867)
.|++|+|++. .+|+|.|.. .+.+.|++ ..+++|||+.+. .|+.|++|+|+++ ++|+|.|.+.
T Consensus 171 ~v~~w~~~g~-~nQ~W~~~~~~~~~~Y~i~~~~~s~~~L~~~~~-~G~~v~~~~~~~~~~~~Q~W~~~~~ 238 (288)
T 1ybi_A 171 NVNLYTWDYG-RNQKWTIRYNEEKAAYQFFNTILSNGVLTWIFS-NGNTVRVSSSNDQNNDAQYWLINPV 238 (288)
T ss_dssp BEEEEECCCC-GGGCEEEEEETTTTEEEEEETTSSSEEEEECGG-GTTBEEEEECCCSCCGGGCEEEEEC
T ss_pred EEEEecCCCC-ccCEEEEEEccCCCeEEEEeccCCceEEEecCC-CCCEEEEEecCCCCChhcEEEeeee
Confidence 9999999986 499999973 24556776 579999999753 3789999999744 6799999865
|
| >2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=9.8e-14 Score=155.54 Aligned_cols=129 Identities=16% Similarity=0.143 Sum_probs=83.1
Q ss_pred CcCchhHHhHhh----hhcCCCEEEEEcCCcc-cCccchHHHHHHHHhcCCceeeeEEeeecCCCceecccccccccccc
Q psy1765 188 REGLIRARMFGA----KYATGKVLVFLDSHIE-VNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNW 262 (867)
Q Consensus 188 n~G~a~ArN~G~----~~A~Gd~llfLDaD~~-v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~~~~~~~~~~~~g~f~~ 262 (867)
|.|.+.|.+.|+ +.|+||+|+|+|+|.. .+|+||..|++.+.++ .++|.+.......+. .+.+
T Consensus 73 n~GkG~Al~~G~~~Al~~a~gd~vv~mDADlq~~~P~~i~~Ll~~l~~g-~D~V~g~~~r~~~~~-----------~~~~ 140 (397)
T 2bo4_A 73 RPGKGDGMNTALRYFLEETQWERIHFYDADITSFGPDWITKAEEAADFG-YGLVRHYFPRASTDA-----------MITW 140 (397)
T ss_dssp SSSHHHHHHHHHHHHHHHCCCSEEEECCTTCSSCCHHHHHHHHHHHHTT-CSEEEEECCCCTTSC-----------HHHH
T ss_pred CCCHHHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCHHHHHHHHHHHHcC-CCEEEEEeccccCCc-----------HHHH
Confidence 899999999999 8999999999999996 8999999999999764 455554321100000 0000
Q ss_pred ccc---cccccCCcCcCCCCCCCCCcccccccccceEeEeHHHHHHhCCCC--CCCCCCcccchHHHHHHHHcCCeEEEE
Q psy1765 263 GLH---FKWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSLGQYD--AGLEIWGGENLELSFRIWMCGGSLAMI 337 (867)
Q Consensus 263 ~l~---~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~airR~~f~~vGgfD--e~~~~~G~ED~Dls~Rl~~~G~~i~~~ 337 (867)
.+. +.. ..+.... .......+|.++++|++++++.... +....| +.|+++..++.+.|++|..+
T Consensus 141 ~~~~~ll~~-~~~~~~~---------~~i~dp~sG~~a~~R~vl~~l~~~~~~~~~~~f-g~eiel~~~a~~~G~rI~EV 209 (397)
T 2bo4_A 141 MITRTGFAL-LWPHTEL---------SWIEQPLGGELLMRREVAAMLYEDERVRRRSDW-GIDTLYTFVTVQQGVSIYEC 209 (397)
T ss_dssp HTHHHHHHH-HCTTSSG---------GGCSCTTCCCEEEEHHHHHHHHHCHHHHTCCST-THHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHH-HHHHhhc---------cccccCCcccEEEeHHHHHHHhhhcccCcCCCc-chHHHHHHHHHHcCCEEEEE
Confidence 000 000 0000000 0111223577899999999984321 122334 57999999999999999888
Q ss_pred cc
Q psy1765 338 PC 339 (867)
Q Consensus 338 P~ 339 (867)
|-
T Consensus 210 pi 211 (397)
T 2bo4_A 210 YI 211 (397)
T ss_dssp EC
T ss_pred EC
Confidence 73
|
| >3vsf_A Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactanase, sugar binding protein; 2.76A {Clostridium thermocellum} PDB: 3vsz_A* 3vt0_A* 3vt1_B* 3vt2_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=8.6e-14 Score=162.80 Aligned_cols=126 Identities=15% Similarity=0.133 Sum_probs=99.4
Q ss_pred ceeeeecCCCceecccCCC-CCCCcEEEEecCCCCCCceeeecCCCceEEeeceeeecCCCccEEEeCCCCCCCcceeee
Q psy1765 547 HFHIRLSSTDLCLTSKVDK-TKGSPLVLKKCDELSKTQHWSKTDKSELVLAELLCLDAGATKPKLTKCHEMGGSQEYWCW 625 (867)
Q Consensus 547 ~g~ir~~~~~~CLD~~~~~-~~g~~v~l~~C~~~~~~Q~w~~t~~~~i~~~~~~CLd~~g~~v~l~~C~~~~~~Q~~w~~ 625 (867)
...|++..+++|||+.++. .+|++|.+|+|++. .+|+|+++..+.
T Consensus 362 ~y~i~n~~sg~cLdv~~~~~~~G~~v~~~~c~g~-~~Q~W~~~~~g~--------------------------------- 407 (526)
T 3vsf_A 362 RYKLVNKNSGKVLDVLDGSVDNAAQIVQWTDNGS-LSQQWYLVDVGG--------------------------------- 407 (526)
T ss_dssp CEEEEETTTCCEEEEGGGCCSTTEEEEEECCCCC-GGGCEEEEECST---------------------------------
T ss_pred cEEEEECCCCceEEecCCCCCCCcEEEEccCCCC-cceEEEEEECCC---------------------------------
Confidence 3578889999999988754 57999999999974 488888764422
Q ss_pred eeeccceeeecccCcccccCCChhhhhhhhhccccCCCCCcccccccccccceEEEecCCCceEee-cCCCCCCCceEEe
Q psy1765 626 LRCKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSGTDLCLTS-KVDKTKGSPLVLK 704 (867)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~~~~~~~~~i~~~~sg~CLd~-~~~~~~g~~v~l~ 704 (867)
...+|++..+++|||+ +.+..+|+.|+++
T Consensus 408 --------------------------------------------------g~y~i~n~~sg~cLdv~~~~~~~G~~v~~~ 437 (526)
T 3vsf_A 408 --------------------------------------------------GYKKIVNVKSGRALDVKDESKEDGGVLIQY 437 (526)
T ss_dssp --------------------------------------------------TEEEEEESSSCCEEEEGGGCCSTTEEEEEE
T ss_pred --------------------------------------------------CEEEEEECCCCCEEEeCCCCCCCCCEEEEe
Confidence 0146788899999998 4556788999999
Q ss_pred cCCCCCCCccEEEccCC----cEE-eccCceeeeC------CCCcEEEecCCCCCCCeEEEecCC
Q psy1765 705 KCDELSKTQRWSKTDKS----ELV-LAELLCLDAG------ATKPKLTKCHEMGGSQEWNFVLRD 758 (867)
Q Consensus 705 ~C~~~~~~Q~W~~~~~~----~~~-~~s~~CLD~~------g~~v~~~~C~~~~~~Q~W~~~~~~ 758 (867)
+|++ +.+|+|.+...+ .++ ..+++|||+. |+.|++|+|+++ .+|+|.+...+
T Consensus 438 ~c~g-~~nQ~W~~~~~g~g~y~i~~~~sg~cLdv~~~s~~~G~~v~~~~c~g~-~nQ~W~~~~v~ 500 (526)
T 3vsf_A 438 TSNG-GYNQHWKFTDIGDGYYKISSRHCGKLIDVRKWSTEDGGIIQQWSDAGG-TNQHWKLVLVS 500 (526)
T ss_dssp CCCC-CGGGCEEEEEEETTEEEEEESSSCCEEEEGGGCCSTTEEEEEECCCCC-GGGCEEEEEC-
T ss_pred cCCC-CcccEEEEEECCCCeEEEEECCCCCEEEeCCCCCCCCCEEEEEcCCCC-ccCeEEEEecC
Confidence 9999 799999998754 333 4579999985 558999999985 59999998654
|
| >2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=1.5e-13 Score=147.03 Aligned_cols=126 Identities=17% Similarity=0.193 Sum_probs=95.9
Q ss_pred CCcEEEEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCc-hhhHHHHHhhcCCCceEEEEeccchhhHH
Q psy1765 51 LPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNL-HGEVETFVKGLNDGRVHLYRTSKREGLIR 129 (867)
Q Consensus 51 ~P~vSVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~gi~~ 129 (867)
..++|||||+|||+. ++|+||++|++.++ |||||||||+|.+.. .+.+++|. +..|.||+++ .++|.|++.
T Consensus 52 ~~klSIVVPvYNEe~----~lLesVl~qi~~d~--eIIlVdDGS~D~s~~e~dil~~~~-~~~~~ri~vi-HQkn~gls~ 123 (391)
T 2wvl_A 52 LEQTAIVVPTRNERL----KLLEGVLSGIPHEA--LILVASNSSPDRFQMERDLLEEFA-HLTERPALIF-HQKDPALAE 123 (391)
T ss_dssp HTTEEEEEEESSCCH----HHHHHHHHTSCTTS--EEEEEECCCHHHHHHHHHHHHHHH-HHTTCCEEEE-ETTCHHHHH
T ss_pred HhceEEEEeccCcHH----HHHHHHHhcCCCCc--eEEEEECCCCCChHhHHHHHHHHH-hhcccceEEE-eccChHHHH
Confidence 468999999999886 36999999999998 999999999998411 11222333 3467888887 799999999
Q ss_pred Hhh-hhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhc---CCC
Q psy1765 130 ARM-FGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYA---TGK 205 (867)
Q Consensus 130 a~~-~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A---~Gd 205 (867)
|+| .|...-.++ ....|.|.+.|.-.|+..| .|+
T Consensus 124 Ar~~~G~~~il~~------------------------------------------~~~vR~GKGegmi~Gi~~Ak~~~ge 161 (391)
T 2wvl_A 124 ALRAGGYPHPIGE------------------------------------------DGLVRSGKAEGMILALVFAALSGRR 161 (391)
T ss_dssp HHHHTTCCTTBCT------------------------------------------TSSBCCSHHHHHHHHHHHHHHTTCS
T ss_pred HHHhcCcchhhcc------------------------------------------cccccccchHHHHHHHHHHHhcCCC
Confidence 996 666311110 0134789999999999998 799
Q ss_pred EEEEEcCCcccCccchHHHHH
Q psy1765 206 VLVFLDSHIEVNTHWLEPLLV 226 (867)
Q Consensus 206 ~llfLDaD~~v~p~wLe~Ll~ 226 (867)
||.|+|+|..++....+-+..
T Consensus 162 YVgFvDADdyi~~~v~Eyvk~ 182 (391)
T 2wvl_A 162 YVGFIDADNYFPGAVWEYVRA 182 (391)
T ss_dssp EEEECCSCBSCHHHHHHHHHH
T ss_pred EEEEEcCcCCCccCHHHHHHH
Confidence 999999999997766654433
|
| >3nbc_A Ricin B-like lectin; lactose, sugar BIND protein; HET: LAT; 1.01A {Clitocybe nebularis} PDB: 3nbd_A* 3nbe_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=3.8e-12 Score=122.55 Aligned_cols=121 Identities=13% Similarity=0.232 Sum_probs=88.3
Q ss_pred eeeeecC-CCceecccCCC-CCCCcEEEEecCCCCCCce----eeecCCCc-----eE-EeeceeeecC------CCccE
Q psy1765 548 FHIRLSS-TDLCLTSKVDK-TKGSPLVLKKCDELSKTQH----WSKTDKSE-----LV-LAELLCLDAG------ATKPK 609 (867)
Q Consensus 548 g~ir~~~-~~~CLD~~~~~-~~g~~v~l~~C~~~~~~Q~----w~~t~~~~-----i~-~~~~~CLd~~------g~~v~ 609 (867)
..|++.. +++|||+.++. +.|++|..|+|++.. ||+ |+++..+. .+ .+-++|||+. |+.++
T Consensus 7 Y~I~n~~~sgk~lDv~~~sta~Gt~V~~w~~~g~~-nQ~~~~~W~~~~~~~~~~g~y~i~n~G~~Ldv~~~~ta~Gt~v~ 85 (148)
T 3nbc_A 7 YNITNVAYTNRLIDLTGSNPAENTLIIGHHLNKTP-SGYGNQQWTLVQLPHTTIYTMQAVNPQSYVRVRDDNLVDGAALV 85 (148)
T ss_dssp EEEEESSCTTCEEEEGGGCCSTTEEEEEECCCSTT-TCCGGGCEEEEECTTSSEEEEEESSSCCEEEEGGGCCSTTCBEE
T ss_pred EEEEEecCCCCeEECCCCcCCCCcEEEEeCCCCCh-hheeecEEEEEECCCcccceEEEEECCcEEEccCCCCCCCcEEe
Confidence 3688899 99999998754 579999999999854 888 99987543 22 1228999976 33456
Q ss_pred EEeCCCCCCCcceeeeeeeccceeeecccCcccccCCChhhhhhhhhccccCCCCCcccccccccccceEEEecCCCceE
Q psy1765 610 LTKCHEMGGSQEYWCWLRCKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSGTDLCL 689 (867)
Q Consensus 610 l~~C~~~~~~Q~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~~~~~~~~~i~~~~sg~CL 689 (867)
.+.+ +|+| + +....-...++|+++.+++||
T Consensus 86 ~~~~-----~q~W-~--------------------------------------------i~~~~~~G~y~I~~~~sg~~L 115 (148)
T 3nbc_A 86 GSQQ-----PTPV-S--------------------------------------------IESAGNSGQFRIKIPNLGLAL 115 (148)
T ss_dssp EESS-----CCCE-E--------------------------------------------EEECSSTTCEEEECTTSSEEE
T ss_pred cCCC-----CcEE-E--------------------------------------------EEEccCCCeEEEEeCCCCeEE
Confidence 6654 3443 2 211000012578999999999
Q ss_pred eecCCCCCCCceEEecCCCCCCCccEEEccC
Q psy1765 690 TSKVDKTKGSPLVLKKCDELSKTQRWSKTDK 720 (867)
Q Consensus 690 d~~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~ 720 (867)
|+. ++.+|+++++++|++.+.+|+|.|.+.
T Consensus 116 dv~-stanGt~i~~w~~~~g~~nQ~W~~~~v 145 (148)
T 3nbc_A 116 TLP-SDANSTPIVLGEVDETSTNQLWAFESV 145 (148)
T ss_dssp ECC-CSSTTEECEEEECCSSCGGGCEEEEEC
T ss_pred Eee-cCCCCcEEEEecCCCCCCCcEEEEEec
Confidence 996 667899999999998678999999764
|
| >3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=99.05 E-value=1.4e-09 Score=113.35 Aligned_cols=109 Identities=17% Similarity=0.170 Sum_probs=75.5
Q ss_pred CcCchhHHhHhhhhcC--CCEEEEEcCCcccCccchHHHHHHHHhcCCceeeeEEeeecCCCceeccccccccccccccc
Q psy1765 188 REGLIRARMFGAKYAT--GKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLH 265 (867)
Q Consensus 188 n~G~a~ArN~G~~~A~--Gd~llfLDaD~~v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~ 265 (867)
.++.+...|.|+.+|. .|+++|-|.|..+..+.. .-.||.. ...... ....+ +
T Consensus 96 ~FNRa~LlNvGf~ea~~~~d~~ifHDVDLlP~dd~n------------~Y~c~~~----~~P~Hl-----s~~~~----~ 150 (287)
T 3lw6_A 96 RFNRASLINVGFQFASDVYDYIAMHDVDLLPLNDNL------------LYEYPSS----LGPLHI-----AGPKL----H 150 (287)
T ss_dssp CCCHHHHHHHHHHHSCTTCCEEEEECTTEEECCTTS------------CCCCCCT----TCCEES-----SCTTT----C
T ss_pred ccchhheecccHHHHhccCCEEEEecccccccCCCc------------cccCCCC----CCceEE-----eeccc----c
Confidence 5677788999999885 699999999988753321 1111100 000000 00000 0
Q ss_pred cccccCCcCcCCCCCCCCCcccccccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEcc
Q psy1765 266 FKWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPC 339 (867)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~ 339 (867)
++ . ......||+++++|+.|.++||||+.|..||+||.||..|+..+|+++...+.
T Consensus 151 ~~----------------~--~Y~~~~GGv~a~~re~f~kVNGFsn~f~GWGgEDdD~~~Rl~~~G~~i~Rp~~ 206 (287)
T 3lw6_A 151 PK----------------Y--HYDNFVGGILLVRREHFKQMNGMSNQYWGWGLEDDEFFVRIRDAGLQVTRPQN 206 (287)
T ss_dssp SS----------------C--CCTTCCCSEEEEEHHHHHHTTSCCSCCCSSSSHHHHHHHHHHHTTCCCBCCSS
T ss_pred CC----------------C--CcCCccccEEeccHHHHHHcCCCCCcCcCCCccchHHHHHHHHcCCcEEcCCC
Confidence 00 1 12356789999999999999999999999999999999999999999977654
|
| >1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=5e-09 Score=114.82 Aligned_cols=195 Identities=12% Similarity=0.047 Sum_probs=112.4
Q ss_pred CCcEEEEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHHH
Q psy1765 51 LPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRA 130 (867)
Q Consensus 51 ~P~vSVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~a 130 (867)
++.++|||++||.+ . |.+||+||++|++.....||||.||||.++ +.++++.+.. +|+.++.
T Consensus 1 ~~~~pViI~~yNRp-~-l~~~L~sL~~~~p~~~~~~iivsdDgs~~~------~~~vi~~~~~-~I~~~~~--------- 62 (343)
T 1fo8_A 1 LAVIPILVIACDRS-T-VRRCLDKLLHYRPSAELFPIIVSQDCGHEE------TAQVIASYGS-AVTHIRQ--------- 62 (343)
T ss_dssp CCCCCEEEEESSCT-T-HHHHHHHHHHHCSCTTTSCEEEEECTTCHH------HHHHHHTTGG-GSEEEEC---------
T ss_pred CCcccEEEEECCcH-H-HHHHHHHHHhcCCCcCCcEEEEEECCCCHH------HHHHHHHcCC-ceEEEEc---------
Confidence 35789999999976 5 999999999998654334999999998654 2333332111 1111100
Q ss_pred hhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEE-cCCCcCch----------hHHhHhh
Q psy1765 131 RMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYR-TSKREGLI----------RARMFGA 199 (867)
Q Consensus 131 ~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~-~~~n~G~a----------~ArN~G~ 199 (867)
+.+..+. .++|.|+. .|+|..+
T Consensus 63 -----------------------------------------------~d~~~~~~~~~N~g~~~y~~ia~h~~~al~~vf 95 (343)
T 1fo8_A 63 -----------------------------------------------PDLSNIAVQPDHRKFQGYYKIARHYRWALGQIF 95 (343)
T ss_dssp -----------------------------------------------SCCCCCCCCTTCGGGHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------------CCccccccchhhcCcccchhHhHHHHHHHHHHH
Confidence 1111111 34566653 6778888
Q ss_pred hhcCCCEEEEEcCCcccCccchHHHHHHH---HhcCCce-eeeEEeeecCCCceeccccccccccccccccccccCCcCc
Q psy1765 200 KYATGKVLVFLDSHIEVNTHWLEPLLVPI---AERTNTV-TVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGT 275 (867)
Q Consensus 200 ~~A~Gd~llfLDaD~~v~p~wLe~Ll~~l---~~~~~~v-v~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~ 275 (867)
..+++++++|||.|+++.|++++-+.+.+ +.++... |++ .+..... ...
T Consensus 96 ~~~~~~~vIiLEDDl~~spdF~~y~~~~l~~y~~D~~I~~ISa----~n~~g~~-----------------~~~------ 148 (343)
T 1fo8_A 96 HNFNYPAAVVVEDDLEVAPDFFEYFQATYPLLKADPSLWCVSA----WNDNGKE-----------------QMV------ 148 (343)
T ss_dssp TTSCCSEEEEEETTEEECTTHHHHHHHHHHHHHHCTTEEEEES----CCTTCBG-----------------GGS------
T ss_pred HhccCCEEEEEcCCCeECHHHHHHHHHHHHHhhcCCcEEEEec----ccCcccc-----------------ccc------
Confidence 88899999999999999999996555544 4454322 111 0000000 000
Q ss_pred CCCCCCCCCcccccccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHH--HHcCCeEEEEcc-cEEEEEe
Q psy1765 276 LNSSEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRI--WMCGGSLAMIPC-SRIGHVF 346 (867)
Q Consensus 276 ~~~~~~~~~p~~~~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl--~~~G~~i~~~P~-s~V~H~~ 346 (867)
...+...-.++..+.|-.+|+.|+.|++ ||+.+. ....|..+|. ...|. ..+.|+ ++|.|+.
T Consensus 149 --~~~~~~~lyrs~~f~~wGWa~wr~~W~e---~~~~wp---~~~Wd~w~r~~~~~~~r-~ci~P~vsrv~n~G 213 (343)
T 1fo8_A 149 --DSSKPELLYRTDFFPGLGWLLLAELWAE---LEPKWP---KAFWDDWMRRPEQRKGR-ACVRPEISRTMTFG 213 (343)
T ss_dssp --CTTCTTCEEEESSCCCSSEEEEHHHHHH---HGGGCC---SSCHHHHHTSHHHHTTC-EEEEESSBSEEECC
T ss_pred --cccCcceEEeecCCCchhhhhcHHHHHH---Hhhhcc---hhHHHHHHHHHHHhCCC-EEEEeccceeEecc
Confidence 0000011123344445558999999997 455432 3456666652 33444 445554 5688854
|
| >2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=2.8e-09 Score=117.64 Aligned_cols=126 Identities=18% Similarity=0.121 Sum_probs=77.1
Q ss_pred CcEEEEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCc----hhhHHHHHhhcCCCceEEEEeccchhh
Q psy1765 52 PSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNL----HGEVETFVKGLNDGRVHLYRTSKREGL 127 (867)
Q Consensus 52 P~vSVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~----~~~~~~~~~~~~~~~~~~~~~~~~~gi 127 (867)
.++|||||+|||+. .+ |..++.+.+..+ |||||||||+|++.- .+.++.+.+.. .+..++..+++.|+
T Consensus 51 ~~iSVVIP~yNEE~-~l---I~~vL~~i~~~~--eIIvVDDgSrD~tD~~~~~~~~l~~~~~~~--~~~~~Vl~~~~p~v 122 (394)
T 2zu9_A 51 GKMAVIVPMKNEKL-HL---VDGVLKAIPHKC--PIIIVSNSKREGPNRYKLEVDLIRHFYNLT--HSKIIMIHQKDPGL 122 (394)
T ss_dssp TTEEEEEEESSCCH-HH---HHHHHHHSCTTS--CEEEEECCCCSSSCHHHHHHHHHHHHHHHH--CCCEEEEETTCHHH
T ss_pred CCEEEEEecCcccH-HH---HHHHHHcCCCCc--EEEEEECcCcccccchhhHHHHHHHHhhcc--ccceEEEecCCcch
Confidence 47999999999986 33 666777666556 999999999887310 01111111100 12223333334333
Q ss_pred HHHhhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEE---cCCCcCchhHHhHhhhhc--
Q psy1765 128 IRARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYR---TSKREGLIRARMFGAKYA-- 202 (867)
Q Consensus 128 ~~a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~---~~~n~G~a~ArN~G~~~A-- 202 (867)
+.+.+ .. ....|. ...+.|.+.|.-.|+.+|
T Consensus 123 ~~~~~-----------------------------------------~~---g~~~il~~~~~~r~GKG~Am~aGl~~A~~ 158 (394)
T 2zu9_A 123 AKAFK-----------------------------------------EV---GYTDILDENGMIRSGKGEGMLVGLLLAKA 158 (394)
T ss_dssp HHHHH-----------------------------------------HH---TCCTTBCTTSSBCCSHHHHHHHHHHHHHH
T ss_pred hHHhh-----------------------------------------hc---cccccccccccccCChHHHHHHHHHHHhh
Confidence 33220 00 011111 011349999999999999
Q ss_pred -CCCEEEEEcCCcccCccchHHHHHHHHh
Q psy1765 203 -TGKVLVFLDSHIEVNTHWLEPLLVPIAE 230 (867)
Q Consensus 203 -~Gd~llfLDaD~~v~p~wLe~Ll~~l~~ 230 (867)
+||+|+|+|+|. ..|..+.++++.+..
T Consensus 159 ~~gd~Vv~~DaDl-~iP~~v~~~~kgy~a 186 (394)
T 2zu9_A 159 IGAEYVGFVDADN-YIPGAVNEYVKDYAA 186 (394)
T ss_dssp TTCSEEEECCSCB-SCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEeCCC-CCHHHHHHHHHHhhh
Confidence 999999999999 567777777776554
|
| >2x2s_A Agglutinin, agglutinin SSA; fungal lectin, beta-trefoil domain, cell adhesion; 1.60A {Sclerotinia sclerotiorum} PDB: 2x2t_A* | Back alignment and structure |
|---|
Probab=98.58 E-value=1.8e-07 Score=85.97 Aligned_cols=119 Identities=13% Similarity=0.139 Sum_probs=90.2
Q ss_pred eEEE-ecCCCceEee-cCCCCCCCceEEecC--CCCCCCccEEEcc------CCc---EEeccCceeeeCCC----CcEE
Q psy1765 678 FHIR-LSGTDLCLTS-KVDKTKGSPLVLKKC--DELSKTQRWSKTD------KSE---LVLAELLCLDAGAT----KPKL 740 (867)
Q Consensus 678 ~~i~-~~~sg~CLd~-~~~~~~g~~v~l~~C--~~~~~~Q~W~~~~------~~~---~~~~s~~CLD~~g~----~v~~ 740 (867)
+.|+ +..+++=|++ .+..++|..|.++.= .+ .++|+|.+.. .++ +.+.+++-|++.+. .+++
T Consensus 9 Y~I~p~~~s~~~L~v~~~~t~~G~~Vr~y~r~~T~-~d~qkw~~~~v~~~~~~~~Y~Iinv~sG~~L~~~~~~~~at~~q 87 (153)
T 2x2s_A 9 YEIVPYQAPSLNLNAWEGKLEPGAVVRTYTRGDKP-SDNAKWQVALVAGSGDSAEYLIINVHSGYFLTATKENHIVSTPQ 87 (153)
T ss_dssp EEEEETTCTTEEEEECCSSCCSCEEEEEEECCSSC-CGGGCEEEEEEECCGGGCEEEEEETTTCCBCBCCSTTEECEECC
T ss_pred EEEeeccCCCcceEeccccCCCCceeEEeccCCCC-CCcceeEEEEEeccCCCceEEEEecCCccEEEecCCCCceEEEE
Confidence 5676 6688999999 446778888889887 55 6799998542 233 23557899998733 4444
Q ss_pred EecCCCCCCCeEEEec-----CCeeeeecCC-CCceeecCCCCC--CCeEEEEecCCCCCceEEEec
Q psy1765 741 TKCHEMGGSQEWNFVL-----RDKTPIYSPA-TGTCLGSKNRLE--NTVIVMEMCAQHKDTSWDLVP 799 (867)
Q Consensus 741 ~~C~~~~~~Q~W~~~~-----~~~~~i~n~~-sg~CLd~~~~~~--g~~v~~~~C~~~~~Q~W~~~~ 799 (867)
++=- ++.|+|++.. ++..+|-|.+ |+.-||+.+.++ |+.|.+|+-++.++|+|.|++
T Consensus 88 ~sp~--~~~~rWrI~~~G~~~~G~f~I~nk~~s~~vldV~~~~t~~GAdVi~~~~~~~dnQ~W~fda 152 (153)
T 2x2s_A 88 ISPT--DPSARWTIKPATTHQYEVFTINNKVSELGQLTVKDYSTHSGADVLSASAKTADNQKWYFDA 152 (153)
T ss_dssp CCTT--CGGGCEEEEESCC--CCCEEEEESSGGGCEEEEGGGCCSTTCBEEEECCCCCGGGCEEEEE
T ss_pred EcCC--CccceEEEEeccccCcceEEEecccCCCceEEeccCCCCCCceEEEeecCCCccceeeccc
Confidence 4443 3689999875 3456688888 999999987666 999999999999999999985
|
| >1sr4_A CDT A, cytolethal distending toxin subunit A; bacterial, virulence, DNA damage, genotoxin, cytotoxins, cell cycle, apoptosis, lectin; 2.00A {Haemophilus ducreyi} SCOP: b.42.2.1 PDB: 2f2f_A | Back alignment and structure |
|---|
Probab=98.33 E-value=1.5e-06 Score=86.10 Aligned_cols=104 Identities=16% Similarity=0.303 Sum_probs=77.8
Q ss_pred CCCceEEecCCCCC--------------CCccEEEc---cCCcEE---eccCceeeeCCCCcEEEecCCCCCCCeEEEec
Q psy1765 697 KGSPLVLKKCDELS--------------KTQRWSKT---DKSELV---LAELLCLDAGATKPKLTKCHEMGGSQEWNFVL 756 (867)
Q Consensus 697 ~g~~v~l~~C~~~~--------------~~Q~W~~~---~~~~~~---~~s~~CLD~~g~~v~~~~C~~~~~~Q~W~~~~ 756 (867)
+|+.+++|.|++.+ ..+.|++. ..+.+. ..++.||.+.+..++..+|+.+...|.|.+..
T Consensus 67 ng~~lt~Wa~~~~nw~wgY~~~ds~~FG~~r~W~i~~~~p~G~VqFvN~~TgtCL~ay~nGvv~~~C~~s~~~Q~wsiiP 146 (206)
T 1sr4_A 67 NGALLTVWALAKRNWLWAYPNIYSQDFGNIRNWKMEPGKHREYFRFVNQSLGTCVEAYGNGLIHDICSLDKLAQEFELLP 146 (206)
T ss_dssp TSEEEEECSCSTTCBEEEEEGGGCGGGGGGGCEEEEECSSTTCEEEEETTTCCEEEEETTEEEEECCCTTCGGGCEEEEE
T ss_pred CCCEEEEEecCCCcceeeecccccCCcCCcceeEEEeecCCCEEEEEECCCCceeeeccCCeEEecCCCCCcccEEEEec
Confidence 46778889987732 36889876 244433 34699999976678999999865689999863
Q ss_pred --CCeeeeecCCCCceeecCCCCC--CCeEEEEecC----CCCCceEEEecC
Q psy1765 757 --RDKTPIYSPATGTCLGSKNRLE--NTVIVMEMCA----QHKDTSWDLVPV 800 (867)
Q Consensus 757 --~~~~~i~n~~sg~CLd~~~~~~--g~~v~~~~C~----~~~~Q~W~~~~~ 800 (867)
++..+|+|.+++.||++...+. ...+.+..|. ....|+|.|.+.
T Consensus 147 ttnGAVQIKnvatg~CL~t~~~s~~~~~~i~l~~C~d~~~~~l~QlW~itpP 198 (206)
T 1sr4_A 147 TDSGAVVIKSVSQGRCVTYNPVSTTFYSTVTLSVCDGATEPSRDQTWYLAPP 198 (206)
T ss_dssp BTTSCEEEEETTTCCEEEECSSCSSSCBCEEEECCCCCEETTEECCEEEECC
T ss_pred CCCccEEEEECCCCccCCccCCCCceeeeEEEeecCCCCCCCHHHCEEeccC
Confidence 4567899999999999844322 4579999995 555699999763
|
| >2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus} | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00011 Score=72.33 Aligned_cols=127 Identities=16% Similarity=0.140 Sum_probs=78.5
Q ss_pred CCEEEEEcCCCcCchhHHhHhhhh----cCCCEEEEEcCC---cccCccchHHHHHHHHhcCCceeeeEEeeecCCCcee
Q psy1765 178 GRVHLYRTSKREGLIRARMFGAKY----ATGKVLVFLDSH---IEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQY 250 (867)
Q Consensus 178 ~~vrii~~~~n~G~a~ArN~G~~~----A~Gd~llfLDaD---~~v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~~~~~ 250 (867)
-.+++... ..=+..|||..+.. ...|+++|+||| ..++|+-+.+|+ +....+|++.... .+.. .+
T Consensus 26 i~~~l~~~--~SlI~raRN~lv~~Fl~~~~~dhllfIDAD~~~I~FdPe~V~rLl----~~g~DVV~GsYp~-K~~~-~~ 97 (203)
T 2c0n_A 26 IEYVILSR--RNHVAVQREIALDMFLEMKDYDTLAFLDEDVVPIEIDFQKVEAKF----NEGYDVVCGYYYL-KTLR-GY 97 (203)
T ss_dssp CCEEEECC--CSCHHHHHHHHHHHHHHCTTCCEEEEECTTEEEEECCHHHHHHHH----HHTCSEEEEECBC-TTSS-SB
T ss_pred CeEEEEcc--ccchHHHHHHHHHHHHhcCCCCEEEEEeCCCCccccCHHHHHHHH----hCCCCEEEEEeec-cCCC-cc
Confidence 35666555 44567999988776 467999999999 999999999998 3345566553311 1100 00
Q ss_pred ccccccccccccccccccccCCcCcCCCCCCCCCcccccccccceEeEeHHHHHHhC--CC----CCCCCCCcccchHHH
Q psy1765 251 TSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSLG--QY----DAGLEIWGGENLELS 324 (867)
Q Consensus 251 ~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~airR~~f~~vG--gf----De~~~~~G~ED~Dls 324 (867)
..+.-.+. ......++....+|+++|+|++|+.+- .| ++...-+-|||+.||
T Consensus 98 -----s~~a~~y~-----------------~~i~~~~V~d~~tGF~lIkR~V~e~L~~p~fl~~~~~e~~~~~gEdv~F~ 155 (203)
T 2c0n_A 98 -----SVYRKDWE-----------------KEIFDGEVNGCGLGFTFIKREFLEKIKRPAFLAFKPIESPHWIGEDVYFF 155 (203)
T ss_dssp -----SEESSSBC-----------------SSCCCEECSEECSSEEEEEHHHHTTSCSSCCCC---------CCHHHHHH
T ss_pred -----chHHHHHH-----------------HhccCceeeeccccEEEEhHHHHHHHhhhhhhcCChhhhccccCCceEEE
Confidence 00000000 001112556777899999999999972 22 222223347999999
Q ss_pred HHHHHcCCeE
Q psy1765 325 FRIWMCGGSL 334 (867)
Q Consensus 325 ~Rl~~~G~~i 334 (867)
.-+...|+.+
T Consensus 156 ~~~k~~~~~~ 165 (203)
T 2c0n_A 156 STHKPRTYAL 165 (203)
T ss_dssp HHHCCCEEEE
T ss_pred eccccccccc
Confidence 9998888876
|
| >1dqg_A Mannose receptor; beta trefoil, multilectin receptor, pituitary hormones, sulfated carbohydrate, sugar binding protein; 1.70A {Mus musculus} SCOP: b.42.2.2 PDB: 1dqo_A* 1fwu_A* 1fwv_A* | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00011 Score=68.16 Aligned_cols=71 Identities=21% Similarity=0.404 Sum_probs=56.8
Q ss_pred ccCceeeeCCCCcEE-EecCCCCCCCeEEEecCCeeeeecCCCCceeecCCCCCCCeEEEEecCCC-CCceEEEe
Q psy1765 726 AELLCLDAGATKPKL-TKCHEMGGSQEWNFVLRDKTPIYSPATGTCLGSKNRLENTVIVMEMCAQH-KDTSWDLV 798 (867)
Q Consensus 726 ~s~~CLD~~g~~v~~-~~C~~~~~~Q~W~~~~~~~~~i~n~~sg~CLd~~~~~~g~~v~~~~C~~~-~~Q~W~~~ 798 (867)
+.+.||.+..+.+++ ++|+....+|+|....+.. |.|..|.+||.+.+......|.++.||.. ..|.|+=.
T Consensus 12 ~~~~Cl~a~~~~~v~~~~C~~~s~~q~WkWvS~~r--Lfnlgs~~CLGl~~~~~~~~l~l~~CD~~~~~l~W~C~ 84 (135)
T 1dqg_A 12 DHKRCVDALSAISVQTATCNPEAESQKFRWVSDSQ--IMSVAFKLCLGVPSKTDWASVTLYACDSKSEYQKWECK 84 (135)
T ss_dssp TTTEEEEEEETTEEEEESCCTTCGGGCEEESSSSC--EEETTTTEEEECSSSCTTCBCEEECCCTTCTTSCEEEC
T ss_pred CCCceeeecCccEEEeccCCCCChhheEEEeccCc--eeccCcCcccccCCCCCcceeEEEecCCCCccceEEeC
Confidence 468999998767777 5999777799999986553 99999999999955433557999999954 45999944
|
| >1sr4_A CDT A, cytolethal distending toxin subunit A; bacterial, virulence, DNA damage, genotoxin, cytotoxins, cell cycle, apoptosis, lectin; 2.00A {Haemophilus ducreyi} SCOP: b.42.2.1 PDB: 2f2f_A | Back alignment and structure |
|---|
Probab=97.46 E-value=0.0004 Score=68.94 Aligned_cols=89 Identities=12% Similarity=0.257 Sum_probs=61.7
Q ss_pred CCcccccccccccceEEEecCCCceEeecCCCCCCCceEEecCCCCCCCccEEEccCC--c--E-EeccCceeeeC--C-
Q psy1765 664 FQPWYSRARNYTSHFHIRLSGTDLCLTSKVDKTKGSPLVLKKCDELSKTQRWSKTDKS--E--L-VLAELLCLDAG--A- 735 (867)
Q Consensus 664 ~q~W~~~~~~~~~~~~i~~~~sg~CLd~~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~~--~--~-~~~s~~CLD~~--g- 735 (867)
.+.|.+........-+|+|..++.||.+.. +.++..+|+.++..|.|.+.... . + .++++.||++. +
T Consensus 96 ~r~W~i~~~~p~G~VqFvN~~TgtCL~ay~-----nGvv~~~C~~s~~~Q~wsiiPttnGAVQIKnvatg~CL~t~~~s~ 170 (206)
T 1sr4_A 96 IRNWKMEPGKHREYFRFVNQSLGTCVEAYG-----NGLIHDICSLDKLAQEFELLPTDSGAVVIKSVSQGRCVTYNPVST 170 (206)
T ss_dssp GGCEEEEECSSTTCEEEEETTTCCEEEEET-----TEEEEECCCTTCGGGCEEEEEBTTSCEEEEETTTCCEEEECSSCS
T ss_pred cceeEEEeecCCCEEEEEECCCCceeeecc-----CCeEEecCCCCCcccEEEEecCCCccEEEEECCCCccCCccCCCC
Confidence 456776521112346899999999999832 23699999985668999996433 3 3 35679999984 2
Q ss_pred ---CCcEEEecCC---CCCCCeEEEecC
Q psy1765 736 ---TKPKLTKCHE---MGGSQEWNFVLR 757 (867)
Q Consensus 736 ---~~v~~~~C~~---~~~~Q~W~~~~~ 757 (867)
..+.+.+|.. ....|+|.+...
T Consensus 171 ~~~~~i~l~~C~d~~~~~l~QlW~itpP 198 (206)
T 1sr4_A 171 TFYSTVTLSVCDGATEPSRDQTWYLAPP 198 (206)
T ss_dssp SSCBCEEEECCCCCEETTEECCEEEECC
T ss_pred ceeeeEEEeecCCCCCCCHHHCEEeccC
Confidence 2788999951 234799988753
|
| >1dqg_A Mannose receptor; beta trefoil, multilectin receptor, pituitary hormones, sulfated carbohydrate, sugar binding protein; 1.70A {Mus musculus} SCOP: b.42.2.2 PDB: 1dqo_A* 1fwu_A* 1fwv_A* | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00031 Score=65.24 Aligned_cols=75 Identities=20% Similarity=0.325 Sum_probs=59.9
Q ss_pred eEEEecCCCceEeecCCCCCCCceEEe-cCCCCCCCccEEEccCC-cEEeccCceeeeC--CC--CcEEEecCCCCCCCe
Q psy1765 678 FHIRLSGTDLCLTSKVDKTKGSPLVLK-KCDELSKTQRWSKTDKS-ELVLAELLCLDAG--AT--KPKLTKCHEMGGSQE 751 (867)
Q Consensus 678 ~~i~~~~sg~CLd~~~~~~~g~~v~l~-~C~~~~~~Q~W~~~~~~-~~~~~s~~CLD~~--g~--~v~~~~C~~~~~~Q~ 751 (867)
..|.|...++||.+.. +.+++. +|+..+.+|+|.+.+.. ...+.+.+||-+. .. +|.+++|+.+...|+
T Consensus 6 F~I~~e~~~~Cl~a~~-----~~~v~~~~C~~~s~~q~WkWvS~~rLfnlgs~~CLGl~~~~~~~~l~l~~CD~~~~~l~ 80 (135)
T 1dqg_A 6 FLIYNEDHKRCVDALS-----AISVQTATCNPEAESQKFRWVSDSQIMSVAFKLCLGVPSKTDWASVTLYACDSKSEYQK 80 (135)
T ss_dssp BCEEETTTTEEEEEEE-----TTEEEEESCCTTCGGGCEEESSSSCEEETTTTEEEECSSSCTTCBCEEECCCTTCTTSC
T ss_pred EEEEECCCCceeeecC-----ccEEEeccCCCCChhheEEEeccCceeccCcCcccccCCCCCcceeEEEecCCCCccce
Confidence 5688999999999842 356775 99977999999998655 4567889999986 22 799999997777899
Q ss_pred EEEecC
Q psy1765 752 WNFVLR 757 (867)
Q Consensus 752 W~~~~~ 757 (867)
|.=...
T Consensus 81 W~C~~~ 86 (135)
T 1dqg_A 81 WECKND 86 (135)
T ss_dssp EEECST
T ss_pred EEeCCC
Confidence 997653
|
| >1xez_A Hemolysin, cytolysin; pore-forming toxin, Pro-toxin, water- soluble monomer, beta-prism, beta-trefoil; HET: BOG; 2.30A {Vibrio cholerae} PDB: 3o44_A | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00028 Score=79.46 Aligned_cols=98 Identities=19% Similarity=0.349 Sum_probs=74.5
Q ss_pred cCCCceEeecCCCCCCCceEEecCCCCCCCccEEEccCCcEEe--ccCceeeeCCCCcEEEecCCCCCCCeEEEecCCee
Q psy1765 683 SGTDLCLTSKVDKTKGSPLVLKKCDELSKTQRWSKTDKSELVL--AELLCLDAGATKPKLTKCHEMGGSQEWNFVLRDKT 760 (867)
Q Consensus 683 ~~sg~CLd~~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~~~~~~--~s~~CLD~~g~~v~~~~C~~~~~~Q~W~~~~~~~~ 760 (867)
...++|||+... +.|.-+.|++.+.+|.|.++..+..+. +..+|||..+-. .+.+|+.+ ..|+|...+++..
T Consensus 472 sfNnrCLdv~~~----~~ls~~~C~~~~~nQsfiyDq~gRYvSa~n~~~CLD~~~L~-~lq~C~~s-LTQkW~W~~~~d~ 545 (721)
T 1xez_A 472 SFNNRCIQVDAQ----GRLTANMCDSQQSAQSFIYDQLGRYVSASNTKLCLDGAALD-ALQPCNQN-LTQRWEWRKGTDE 545 (721)
T ss_dssp TTTTEEEEECTT----CBEEEECCCTTCGGGCEEECTTSCEEETTEEEEECCTTCTT-BCEECCSC-GGGCEEECTTSSC
T ss_pred ccCCeeEEeecC----ceEEEEEcCCCCccceeeEccCCcEEEccchhhccccCchh-hhhhccCC-ccceEEEeCCCCc
Confidence 356899999432 479999999988999999999887774 468999988655 89999985 4999999655543
Q ss_pred eeecCCCCceeecCCCCCCCeEEEEecCC
Q psy1765 761 PIYSPATGTCLGSKNRLENTVIVMEMCAQ 789 (867)
Q Consensus 761 ~i~n~~sg~CLd~~~~~~g~~v~~~~C~~ 789 (867)
|.|.-.+.-|.....+ ..|.++.-++
T Consensus 546 -LkN~~~~~~Lghdk~t--g~L~ly~~~~ 571 (721)
T 1xez_A 546 -LTNVYSGESLGHDKQT--GELGLYASSN 571 (721)
T ss_dssp -EEETTTCCEEEEETTT--CCEEEESSCB
T ss_pred -ceeccCCeeecccCcc--cceeeEeecC
Confidence 8999999888865432 1355554443
|
| >1xez_A Hemolysin, cytolysin; pore-forming toxin, Pro-toxin, water- soluble monomer, beta-prism, beta-trefoil; HET: BOG; 2.30A {Vibrio cholerae} PDB: 3o44_A | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00012 Score=82.47 Aligned_cols=65 Identities=15% Similarity=0.357 Sum_probs=55.2
Q ss_pred cCceeeeCCC-CcEEEecCCCCCCCeEEEecCCeeeeecCCCCceeecCCCCCCCeEEEEecCCCCCceEEE
Q psy1765 727 ELLCLDAGAT-KPKLTKCHEMGGSQEWNFVLRDKTPIYSPATGTCLGSKNRLENTVIVMEMCAQHKDTSWDL 797 (867)
Q Consensus 727 s~~CLD~~g~-~v~~~~C~~~~~~Q~W~~~~~~~~~i~n~~sg~CLd~~~~~~g~~v~~~~C~~~~~Q~W~~ 797 (867)
.++|||+.+. .|.-|.|++.+.+|.|.++..+.+ +.-.++.+|||..+-. .+.+|+.+..|+|.+
T Consensus 474 NnrCLdv~~~~~ls~~~C~~~~~nQsfiyDq~gRY-vSa~n~~~CLD~~~L~-----~lq~C~~sLTQkW~W 539 (721)
T 1xez_A 474 NNRCIQVDAQGRLTANMCDSQQSAQSFIYDQLGRY-VSASNTKLCLDGAALD-----ALQPCNQNLTQRWEW 539 (721)
T ss_dssp TTEEEEECTTCBEEEECCCTTCGGGCEEECTTSCE-EETTEEEEECCTTCTT-----BCEECCSCGGGCEEE
T ss_pred CCeeEEeecCceEEEEEcCCCCccceeeEccCCcE-EEccchhhccccCchh-----hhhhccCCccceEEE
Confidence 3799999854 788999999777999999988765 5556788999988742 778999999999999
|
| >2x2s_A Agglutinin, agglutinin SSA; fungal lectin, beta-trefoil domain, cell adhesion; 1.60A {Sclerotinia sclerotiorum} PDB: 2x2t_A* | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0075 Score=55.71 Aligned_cols=56 Identities=14% Similarity=0.168 Sum_probs=43.9
Q ss_pred CCCccccccccc--ccceEEEecC-CCceEee-cCCCCCCCceEEecCCCCCCCccEEEcc
Q psy1765 663 KFQPWYSRARNY--TSHFHIRLSG-TDLCLTS-KVDKTKGSPLVLKKCDELSKTQRWSKTD 719 (867)
Q Consensus 663 ~~q~W~~~~~~~--~~~~~i~~~~-sg~CLd~-~~~~~~g~~v~l~~C~~~~~~Q~W~~~~ 719 (867)
+.|+|++..... .....|.+.. ++.-||+ ++++.+|+.|..++-.+ ..+|+|.|+.
T Consensus 93 ~~~rWrI~~~G~~~~G~f~I~nk~~s~~vldV~~~~t~~GAdVi~~~~~~-~dnQ~W~fda 152 (153)
T 2x2s_A 93 PSARWTIKPATTHQYEVFTINNKVSELGQLTVKDYSTHSGADVLSASAKT-ADNQKWYFDA 152 (153)
T ss_dssp GGGCEEEEESCC--CCCEEEEESSGGGCEEEEGGGCCSTTCBEEEECCCC-CGGGCEEEEE
T ss_pred ccceEEEEeccccCcceEEEecccCCCceEEeccCCCCCCceEEEeecCC-Cccceeeccc
Confidence 578998876321 2235677777 8899999 67888999999999998 7999999963
|
| >2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A* | Back alignment and structure |
|---|
Probab=94.09 E-value=0.023 Score=61.29 Aligned_cols=48 Identities=15% Similarity=0.129 Sum_probs=36.7
Q ss_pred eEEEEEeCCCCCCcCc---hHHHHHHHhhcCCCCEEEEEcCCCcCchhHHh-Hhhh
Q psy1765 149 HEIILVNDFSEYPSNL---HGEVESFVKGLNNGRVHLYRTSKREGLIRARM-FGAK 200 (867)
Q Consensus 149 ~EIIVVDn~Std~~~~---~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN-~G~~ 200 (867)
.|||||||||+| .+ .+.+.+|.+.. +.++.+|+++ |.|++.||| .|+.
T Consensus 80 ~eIIlVdDGS~D--~s~~e~dil~~~~~~~-~~ri~viHQk-n~gls~Ar~~~G~~ 131 (391)
T 2wvl_A 80 ALILVASNSSPD--RFQMERDLLEEFAHLT-ERPALIFHQK-DPALAEALRAGGYP 131 (391)
T ss_dssp SEEEEEECCCHH--HHHHHHHHHHHHHHHT-TCCEEEEETT-CHHHHHHHHHTTCC
T ss_pred ceEEEEECCCCC--ChHhHHHHHHHHHhhc-ccceEEEecc-ChHHHHHHHhcCcc
Confidence 499999999998 44 34566776532 3689999755 999999996 7764
|
| >1sr4_C CDT C, cytolethal distending toxin protein C; bacterial, virulence, DNA damage, genotoxin, cytotoxins, cell cycle, apoptosis, lectin; 2.00A {Haemophilus ducreyi} SCOP: b.42.2.1 | Back alignment and structure |
|---|
Probab=92.78 E-value=0.074 Score=50.81 Aligned_cols=67 Identities=18% Similarity=0.381 Sum_probs=53.7
Q ss_pred cCceeeeCCCCcEEEecCCCCCCCeEEEe--cCCeeeeecCCCCceeecCCCCCCCeEEEEecCC-C----C--CceEEE
Q psy1765 727 ELLCLDAGATKPKLTKCHEMGGSQEWNFV--LRDKTPIYSPATGTCLGSKNRLENTVIVMEMCAQ-H----K--DTSWDL 797 (867)
Q Consensus 727 s~~CLD~~g~~v~~~~C~~~~~~Q~W~~~--~~~~~~i~n~~sg~CLd~~~~~~g~~v~~~~C~~-~----~--~Q~W~~ 797 (867)
.+.||.+.++ ...+|+.+ ..|.|.+- .+|..+|++.++++|+.+ ... ..+.+..|.. . . .++|.|
T Consensus 73 t~tCL~~~~~--~~~~C~~~-~~t~FsiiPTttgAVQIrS~~~~~CI~~-~n~--~~~gl~~C~~~d~~~~i~l~~Lw~I 146 (166)
T 1sr4_C 73 AAKCFAFLGK--GTTDCKDT-DHTVFNLIPTNTGAFLIKDALLGFCITS-HDF--DDLKLEPCGGSVSGRTFSLAYQWGI 146 (166)
T ss_dssp SSEEECSSTT--SEEETTCH-HHHCEEEEEBTTSCEEEEETTTCCEEEC-CST--TCCEEECCCSCCTTCEECGGGCEEE
T ss_pred CCeeeeecCC--ccccCCCC-hhceEEEEecCCccEEEEecCCCceEee-cCC--CcEEEeeCCCCCcccccCHHHceee
Confidence 5899999877 89999984 57999886 467778999999999999 332 4689999975 2 1 279999
Q ss_pred ec
Q psy1765 798 VP 799 (867)
Q Consensus 798 ~~ 799 (867)
.+
T Consensus 147 tP 148 (166)
T 1sr4_C 147 LP 148 (166)
T ss_dssp EC
T ss_pred cc
Confidence 75
|
| >2f2f_C CDT C, cytolethal distending toxin C; actinobacillus actinomycetemcomitans, oligomerization, stability and toxic activity; 2.40A {Aggregatibacter actinomycetemcomitans} SCOP: b.42.2.1 | Back alignment and structure |
|---|
Probab=92.41 E-value=0.084 Score=51.37 Aligned_cols=108 Identities=15% Similarity=0.300 Sum_probs=73.5
Q ss_pred ccceEEEecCCCceEeecCCCCCCCceEEecCCCCCCCccEEEccC------------CcEE---eccCceeeeCCCCcE
Q psy1765 675 TSHFHIRLSGTDLCLTSKVDKTKGSPLVLKKCDELSKTQRWSKTDK------------SELV---LAELLCLDAGATKPK 739 (867)
Q Consensus 675 ~~~~~i~~~~sg~CLd~~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~------------~~~~---~~s~~CLD~~g~~v~ 739 (867)
+..-.||+..+|.=|..-.. +=++ -..|.|.+... +.+. ...+.||.+.++ .
T Consensus 37 tp~fsiRsl~TG~~l~~~~~----------~~~~-~~~~nW~l~ei~~~~~d~~~~~~G~VqFvn~~t~tCL~~~~~--~ 103 (186)
T 2f2f_C 37 PPRISLRSLLTAQPIKNDHY----------DSHN-YLSTHWELIDYKGKEYEKLRDGGTLVQFKVVGAAKCFAFPGE--G 103 (186)
T ss_dssp CCEEEEEETTTCCBCCCSSS----------CTTS-GGGGCEEEEECCCSTTTTTCTTCEEEEEECTTSSEEECTTCS--S
T ss_pred CCcEEEEecccCcccccccc----------cccc-cccCCcEEEEecccccccccCCCCeEEEEeCCCCeeeeecCC--c
Confidence 34467888888877764110 0001 23577777631 2222 235899999877 8
Q ss_pred EEecCCCCCCCeEEEe--cCCeeeeecCCCCceeecCCCCCCCeEEEEecCC-----CCC--ceEEEec
Q psy1765 740 LTKCHEMGGSQEWNFV--LRDKTPIYSPATGTCLGSKNRLENTVIVMEMCAQ-----HKD--TSWDLVP 799 (867)
Q Consensus 740 ~~~C~~~~~~Q~W~~~--~~~~~~i~n~~sg~CLd~~~~~~g~~v~~~~C~~-----~~~--Q~W~~~~ 799 (867)
..+|+... .|.|++- .+|..+|++.++++|+.+ ... ..+.+..|.- ... ++|.|.+
T Consensus 104 ~~~C~~~~-~t~FsliPTtnGAVQIrS~~~~~Ci~~-~n~--~~fgl~~C~~~d~~~~i~L~~Lw~ItP 168 (186)
T 2f2f_C 104 TTDCKDID-HTVFNLIPTNTGAFLIKDALLGFCMTS-HDF--DDLRLEPCGISVSGRTFSLAYQWGILP 168 (186)
T ss_dssp EEETTCHH-HHCEEEEEBSSSCEEEEETTTCCEEEC-CST--TCCEEECCCSCCTTCEECGGGCEEEEC
T ss_pred cccCCCCC-cceEEEEecCCccEEEEecCCCceEee-cCc--CceEEeecCCCCcccccCHHHceeecc
Confidence 99999865 7999886 467778999999999999 332 4678999972 222 8999975
|
| >1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A* | Back alignment and structure |
|---|
Probab=91.50 E-value=1.2 Score=46.93 Aligned_cols=58 Identities=9% Similarity=0.022 Sum_probs=46.1
Q ss_pred CCEEEEEcCCCcCchhHHhHhhhhcCCCEEEEEcCCcccCccchHHHHHHHHhcCCceee
Q psy1765 178 GRVHLYRTSKREGLIRARMFGAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTV 237 (867)
Q Consensus 178 ~~vrii~~~~n~G~a~ArN~G~~~A~Gd~llfLDaD~~v~p~wLe~Ll~~l~~~~~~vv~ 237 (867)
..|++++.+.|. -..|-.-...-+.+-|+.+|.|+.++.+-|+......++.|..+|+
T Consensus 83 vpv~v~~~~~ns--LnnRF~p~~~i~T~AVLslDDDv~l~~~el~faF~vWr~~PdRlVG 140 (293)
T 1omz_A 83 IPVIFKPQTANK--MRNRLQVFPEVETNAVLMVDDDTLISAQDLVFAFSIWQQFPDQIIG 140 (293)
T ss_dssp SCEEEEECSSCC--GGGGGSCCTTCCSSEEEEECTTEEECHHHHHHHHHHHTTSTTSEEE
T ss_pred ccEEEEeCCCCc--hhhccCCCccCCcCEEEEEcCCCCCCHHHHHHHHHHHHHCccceec
Confidence 468888877552 2344445566789999999999999999999999999999988775
|
| >3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A* | Back alignment and structure |
|---|
Probab=89.48 E-value=0.87 Score=47.57 Aligned_cols=171 Identities=14% Similarity=0.147 Sum_probs=84.9
Q ss_pred eEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEE--cCCCcCchhHHhHhhhh---cCCCEEEEEcCCcc-cCccchH
Q psy1765 149 HEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYR--TSKREGLIRARMFGAKY---ATGKVLVFLDSHIE-VNTHWLE 222 (867)
Q Consensus 149 ~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~--~~~n~G~a~ArN~G~~~---A~Gd~llfLDaD~~-v~p~wLe 222 (867)
.+|||+-+ + +.+.+++... .++++. .+...|.++ ...+++. ...|+++++++|.- +.+..|+
T Consensus 59 ~~IvV~t~---~-----~~i~~~~~~~---g~~v~~~~~~~~~Gt~~-i~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~ 126 (264)
T 3k8d_A 59 ERIIVATD---H-----EDVARAVEAA---GGEVCMTRADHQSGTER-LAEVVEKCAFSDDTVIVNVQGDEPMIPATIIR 126 (264)
T ss_dssp SEEEEEES---C-----HHHHHHHHHT---TCEEEECCTTCCSHHHH-HHHHHHHHTCCTTCEEEEECTTCTTCCHHHHH
T ss_pred CEEEEECC---H-----HHHHHHHHHc---CCEEEEecCCCCCCHHH-HHHHHHHhccCCCCEEEEEcCCcccCCHHHHH
Confidence 57777653 1 2355555544 344443 444556544 2233333 25799999999995 5899999
Q ss_pred HHHHHHHhcCCceeeeEEeeecCCCceecccc---ccccccccccccccccCCcCc--CCCCCCCCCcccccccccceEe
Q psy1765 223 PLLVPIAERTNTVTVPIIDIINADTFQYTSSA---LVRGGFNWGLHFKWENLPKGT--LNSSEDFIKPILSPTMAGGLFA 297 (867)
Q Consensus 223 ~Ll~~l~~~~~~vv~p~i~~i~~~~~~~~~~~---~~~g~f~~~l~~~~~~~~~~~--~~~~~~~~~p~~~~~~~G~~~a 297 (867)
.+++.+.+....++......-+.+ .+.... .....-+..+.|.....|... ..... ...+ .......|..+
T Consensus 127 ~li~~~~~~~~~~~~~~~~v~d~~--~~~~p~~vkVv~d~~g~~l~fsr~~ip~~r~~~~~~~-~~~~-~~~~~~~GiY~ 202 (264)
T 3k8d_A 127 QVADNLAQRQVGMATLAVPIHNAE--EAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAEGL-ETVG-DNFLRHLGIYG 202 (264)
T ss_dssp HHHHHHHTSSCSEEEEEEECCSHH--HHTCTTSCEEEECTTSBEEEEESSCCSCCHHHHHHCS-SCCC-SCCEEECSEEE
T ss_pred HHHHHHhhcCCCEEEEEEEcCCHH--HccCCCceEEEECCCCeEEEEecCCCCCCCccccccc-cccC-CcceEEEEEEE
Confidence 999999865543333222211111 010000 000001112222222221100 00000 0001 12345678999
Q ss_pred EeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEE
Q psy1765 298 IDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMI 337 (867)
Q Consensus 298 irR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~ 337 (867)
++++++++.-..++.. +.-.|.+|. +|+...|++|...
T Consensus 203 y~~~~l~~~~~~~~~~-lE~~e~leq-lr~le~G~~I~~~ 240 (264)
T 3k8d_A 203 YRAGFIRRYVNWQPSP-LEHIEMLEQ-LRVLWYGEKIHVA 240 (264)
T ss_dssp EEHHHHHHHHHSCCCH-HHHHHTCTT-HHHHHTTCCEEEE
T ss_pred ECHHHHHHHHhCCCCh-hhhHHHHHH-HHHHHCCCceEEE
Confidence 9999999975555432 100233333 6888999998664
|
| >3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13 | Back alignment and structure |
|---|
Probab=89.04 E-value=0.53 Score=48.69 Aligned_cols=175 Identities=13% Similarity=0.165 Sum_probs=85.3
Q ss_pred eEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhc---CCCEEEEEcCCc-ccCccchHHH
Q psy1765 149 HEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYA---TGKVLVFLDSHI-EVNTHWLEPL 224 (867)
Q Consensus 149 ~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A---~Gd~llfLDaD~-~v~p~wLe~L 224 (867)
.+||||-+. +.+.+++... +..+.+...+...|.+++.. +++.. ..|.++++++|. .+++..|+.+
T Consensus 43 ~~ivVv~~~--------~~i~~~~~~~-g~~v~~~~~~~~~Gt~~~~~-~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~l 112 (252)
T 3oam_A 43 DRVIIATDD--------ERVEQAVQAF-GGVVCMTSPNHQSGTERLAE-VVAKMAIPADHIVVNVQGDEPLIPPAIIRQV 112 (252)
T ss_dssp SEEEEEESC--------HHHHHHHHHT-TCEEEECCTTCCSHHHHHHH-HHHHTTCCTTSEEEECCTTCTTCCHHHHHHH
T ss_pred CeEEEECCH--------HHHHHHHHHc-CCEEEEcCCCCCCcHHHHHH-HHHhcCcCCCCEEEEEeCCeeecCHHHHHHH
Confidence 467776531 3455666554 22333333445567666444 33333 579999999999 4689999999
Q ss_pred HHHHHhcCCceeeeEEeeecCCCceecccc---ccccccccccccccccCCcCcCCCCCCCCCcccccccccceEeEeHH
Q psy1765 225 LVPIAERTNTVTVPIIDIINADTFQYTSSA---LVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQ 301 (867)
Q Consensus 225 l~~l~~~~~~vv~p~i~~i~~~~~~~~~~~---~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~airR~ 301 (867)
++.+.++...++......-+.. .|.... .....-+..+.|....++...-........+-......+|.++++++
T Consensus 113 ~~~~~~~~~~~~~~~~~v~~~~--~~~~p~~g~vv~d~~g~v~~fsr~~i~~~~~~~~~~~~~~~~~~~~n~GiY~~~~~ 190 (252)
T 3oam_A 113 ADNLAACSAPMATLAVEIEDEA--EVFNPNAVKVITDKSGYALYFSRATIPWDRDNFAKADKAIVQPLLRHIGIYAYRAG 190 (252)
T ss_dssp HHHHHHSSCSEEEEEEEECCHH--HHTCTTSCEEEECTTSBEEEEESSCSSCCHHHHHSSSCCCCSCEEEEEEEEEEETT
T ss_pred HHHHHhcCCCEEEEeeecCCHH--HhhCCCceEEEECCCCeEEEEeCCCCCCCCCccccccccccccceEEEEEEEcCHH
Confidence 9998765443332222111111 110000 00000001122222112211000000000001134567889999999
Q ss_pred HHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEE
Q psy1765 302 YFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMI 337 (867)
Q Consensus 302 ~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~ 337 (867)
+|+++-...+...- -.|.+|. +|+...|++|...
T Consensus 191 ~l~~~~~~~~~~~e-~~E~le~-lr~l~~G~~i~~~ 224 (252)
T 3oam_A 191 FINTYLDWQPSQLE-KIECLEQ-LRVLWHGEKIHVA 224 (252)
T ss_dssp HHHHHHHSCCCHHH-HHHTCTT-HHHHHTTCCEEEE
T ss_pred HHHHHHcCCCCccc-ccchhHH-HHHHHCCCeEEEE
Confidence 99987444322110 0233342 5677889988654
|
| >3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0 | Back alignment and structure |
|---|
Probab=88.03 E-value=1.4 Score=45.77 Aligned_cols=174 Identities=19% Similarity=0.257 Sum_probs=86.1
Q ss_pred eEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEE--cCCCcCchhHHhHhhhhc---CCCEEEEEcCCcc-cCccchH
Q psy1765 149 HEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYR--TSKREGLIRARMFGAKYA---TGKVLVFLDSHIE-VNTHWLE 222 (867)
Q Consensus 149 ~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~--~~~n~G~a~ArN~G~~~A---~Gd~llfLDaD~~-v~p~wLe 222 (867)
.+|||+-| + +.+.+++... .++++. .+...|.++. ..+++.. ..|+++++++|.- +++..++
T Consensus 50 ~~VvVvt~---~-----~~i~~~~~~~---g~~v~~~~~~~~~Gt~~i-~~a~~~l~~~~~d~vlv~~gD~Pli~~~~i~ 117 (256)
T 3tqd_A 50 EEVVIATD---D-----KRIRQVAEDF---GAVVCMTSSDHQSGTERI-AEAAVALGFEDDEIIVCLQGDEPLIPPDAIR 117 (256)
T ss_dssp SEEEEEES---C-----HHHHHHHHHT---TCEEEECCTTCCSHHHHH-HHHHHHTTCCTTCEEEEECTTCCCCCHHHHH
T ss_pred CEEEEECC---H-----HHHHHHHHHc---CCeEEEeCCCCCCcHHHH-HHHHHHhCcCCCCEEEEEeCCcccCCHHHHH
Confidence 57777743 1 3455555544 344443 3445666553 3445544 5799999999994 5899999
Q ss_pred HHHHHHHhcCC-ceeeeEEeeecCCCceeccc-cccccccccccccccccCCcCcCCCCC-CCCCcccccccccceEeEe
Q psy1765 223 PLLVPIAERTN-TVTVPIIDIINADTFQYTSS-ALVRGGFNWGLHFKWENLPKGTLNSSE-DFIKPILSPTMAGGLFAID 299 (867)
Q Consensus 223 ~Ll~~l~~~~~-~vv~p~i~~i~~~~~~~~~~-~~~~g~f~~~l~~~~~~~~~~~~~~~~-~~~~p~~~~~~~G~~~air 299 (867)
.+++.+.+++. .+++......+.+.+.-.+. ......-+..+.|.....|...-.... .............|+.+++
T Consensus 118 ~li~~~~~~~~~~~a~l~~~v~~~~~~~~p~~vkvv~d~~g~~l~fsr~pip~~r~~~~~~~~~~~~~~~~~~~GiY~y~ 197 (256)
T 3tqd_A 118 KLAEDLDEHDNVKVASLCTPITEVDELFNPHSTKVVLNRRNYALYFSHAPIPWGRDTFSDKENLQLNGSHYRHVGIYAYR 197 (256)
T ss_dssp HHHHHHHHCC--CEEEEEEECCCHHHHTCTTSCEEEECTTSBEEEEESSCSSCCTTTTTCGGGCCCSSCCEEEEEEEEEE
T ss_pred HHHHHHHhCCCCCEEEEeeEcCCHHHhhCCCccEEEECCCCEEeEEecCCCCCCCcccccccccccCCcceEEEEEEEcC
Confidence 99999986532 33322221111100000000 000000111223332222210000000 0000001234567899999
Q ss_pred HHHHHHhCCCCCCCCCCcccchHH--HHHHHHcCCeEEEEc
Q psy1765 300 RQYFDSLGQYDAGLEIWGGENLEL--SFRIWMCGGSLAMIP 338 (867)
Q Consensus 300 R~~f~~vGgfDe~~~~~G~ED~Dl--s~Rl~~~G~~i~~~P 338 (867)
+++++++-...+.. .|..|- -+|+...|++|....
T Consensus 198 ~~~l~~~~~l~~s~----lE~~e~leqlr~le~G~~i~~~~ 234 (256)
T 3tqd_A 198 VGFLEEYLSWDACP----AEKMEALEQLRILWHGGRIHMVV 234 (256)
T ss_dssp HHHHHHHHHSCCCH----HHHHHTCTTHHHHHTTCCCEEEE
T ss_pred HHHHHHHHhCCCCc----ccchhhhHHHHHHHCCCeEEEEE
Confidence 99999986655432 232221 268899999986654
|
| >4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A | Back alignment and structure |
|---|
Probab=87.76 E-value=3.5 Score=42.56 Aligned_cols=172 Identities=13% Similarity=0.140 Sum_probs=84.7
Q ss_pred eeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhc---CCCEEEEEcCCcc-cCccchHH
Q psy1765 148 LHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYA---TGKVLVFLDSHIE-VNTHWLEP 223 (867)
Q Consensus 148 l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A---~Gd~llfLDaD~~-v~p~wLe~ 223 (867)
+.+||||=|. +.+.+++... +..+.+.+.+...|.. +...|++.. ..|+++++++|.- +++..|+.
T Consensus 42 ~~~vvVvt~~--------~~i~~~~~~~-g~~v~~~~~~~~~Gt~-~i~~a~~~~~~~~~d~vlv~~gD~Pli~~~~i~~ 111 (253)
T 4fcu_A 42 FDDLCVATDD--------ERIAEICRAE-GVDVVLTSADHPSGTD-RLSEVARIKGWDADDIIVNVQGDEPLLPAQLVQQ 111 (253)
T ss_dssp CCEEEEEESC--------HHHHHHHHTT-TCCEEECCTTCCCHHH-HHHHHHHHHTCCTTCEEEECCTTCTTCCHHHHHH
T ss_pred CCEEEEECCH--------HHHHHHHHHc-CCeEEEeCCCCCChHH-HHHHHHHhcCcCCCCEEEEEeCCcccCCHHHHHH
Confidence 3577777531 2355555543 1233332333344543 334444444 4589999999994 58999999
Q ss_pred HHHHHHhcCC-ceeeeEEe------eecCCCceeccccccccccccccccccccCCcCcCCCCCCCCCcccccccccceE
Q psy1765 224 LLVPIAERTN-TVTVPIID------IINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMAGGLF 296 (867)
Q Consensus 224 Ll~~l~~~~~-~vv~p~i~------~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~ 296 (867)
+++.+.+++. .+++.... ..++..+.. ....-+..+.|....+|...-........+-.......|..
T Consensus 112 li~~~~~~~~~~~at~~~~~~~~~~~~~p~~~kv-----v~d~~g~~l~fsr~~ip~~r~~~~~~~~~~~~~~~~~~GiY 186 (253)
T 4fcu_A 112 VAKLLVDKPNCSMSTLCEPIHALDEFQRDSIVKV-----VMSKQNEALYFSRATIPYDRDGAKRDEPTLHTQAFRHLGLY 186 (253)
T ss_dssp HHHHHHHCTTCSEEEEEEECCCHHHHHCTTSCEE-----EECTTSBEEEEESSCCSCCTTTSSSSSCCCCSCCEEEEEEE
T ss_pred HHHHHHhCCCCCEEEEeEEcCCHHHccCCCccEE-----EECCCCeEEEecCCCCCCCCCcccccccccccceeEEEEEE
Confidence 9999987643 33322111 111221110 00000112223222222110000000000001224467899
Q ss_pred eEeHHHHHHhCCCCCCCCCCcccchHH--HHHHHHcCCeEEEEc
Q psy1765 297 AIDRQYFDSLGQYDAGLEIWGGENLEL--SFRIWMCGGSLAMIP 338 (867)
Q Consensus 297 airR~~f~~vGgfDe~~~~~G~ED~Dl--s~Rl~~~G~~i~~~P 338 (867)
+++++++++.-..++.. .|.+|- -+|+...|++|....
T Consensus 187 ~f~~~~l~~~~~~~~~~----le~~e~le~lr~l~~G~~I~~~~ 226 (253)
T 4fcu_A 187 AYRVSLLQEYVTWEMGK----LEKLESLEQLRVLENGHRIAIAV 226 (253)
T ss_dssp EEEHHHHHHHTTSCCCH----HHHHHTCTTHHHHHTTCCEEEEE
T ss_pred EeCHHHHHHHHhCCCCc----ccchhHHHHHHHHHCCCceEEEE
Confidence 99999999987654432 222222 257778999986543
|
| >4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A* | Back alignment and structure |
|---|
Probab=87.58 E-value=5.6 Score=41.15 Aligned_cols=162 Identities=13% Similarity=0.191 Sum_probs=86.7
Q ss_pred eEEEEEeCCCCCCcCchHHHHHHHhhc--CCCCEEEEEcCCCcCchhHHhHhhhhcCCCEEEEEcCCcccCccchHHHHH
Q psy1765 149 HEIILVNDFSEYPSNLHGEVESFVKGL--NNGRVHLYRTSKREGLIRARMFGAKYATGKVLVFLDSHIEVNTHWLEPLLV 226 (867)
Q Consensus 149 ~EIIVVDn~Std~~~~~~~l~~~~~~~--~~~~vrii~~~~n~G~a~ArN~G~~~A~Gd~llfLDaD~~v~p~wLe~Ll~ 226 (867)
.+|+||=+... .+.+.+++... ....+.++..+...|.+.+.-.++.....+.++++++|..+. .-+..+++
T Consensus 71 ~~iivv~~~~~-----~~~~~~~~~~~~~~~~~i~~~~~~~~~G~~~al~~a~~~~~~~~~lv~~~D~~~~-~~l~~l~~ 144 (269)
T 4ecm_A 71 TDIMIITGKEH-----MGDVVSFLGSGQEFGVSFTYRVQDKAGGIAQALGLCEDFVGNDRMVVILGDNIFS-DDIRPYVE 144 (269)
T ss_dssp CEEEEEECTTT-----HHHHHHHHTTSGGGTCEEEEEECSSCCCHHHHHHTTHHHHTTSEEEEEETTEEES-SCSHHHHH
T ss_pred CEEEEECChhh-----HHHHHHHHhhccccCceEEEeeCCccCcHHHHHHHHHHhcCCCcEEEEeCCccCc-cCHHHHHH
Confidence 46666643211 23345555421 123567777777889999988888877778999999999776 66888888
Q ss_pred HHHhcCCceeeeEEeeecCCCceeccccccccccccccccccccCCcCcCCCCCCCCCcccccccccceEeEeHHHHHHh
Q psy1765 227 PIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSL 306 (867)
Q Consensus 227 ~l~~~~~~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~airR~~f~~v 306 (867)
.+.+....++......-+...+.+.. ...|. ...+. ..+ . .+ ....+.+|++++++++|+.+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~g~v~--~d~g~---v~~~~--ekp-------~---~~-~~~~~~~Giy~~~~~~l~~l 206 (269)
T 4ecm_A 145 EFTNQKEGAKVLLQSVDDPERFGVAN--IQNRK---IIEIE--EKP-------K---EP-KSSYAVTGIYLYDSKVFSYI 206 (269)
T ss_dssp HHHTSSSSEEEEEEECSCGGGSEEEE--EETTE---EEEEE--ESC-------S---SC-SCSEEEEEEEEECTTHHHHH
T ss_pred HHHhcCCCeEEEEEECCCCCCceEEE--EcCCE---EEEEE--ECC-------C---CC-CCcEEEEEEEEECHHHHHhh
Confidence 88765443332222111111111100 00000 00010 000 0 01 13356688999999999887
Q ss_pred CCCCCCCCCCcccchHHHHHHHHcCCeEEE
Q psy1765 307 GQYDAGLEIWGGENLELSFRIWMCGGSLAM 336 (867)
Q Consensus 307 GgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~ 336 (867)
....+.-.. -.+-.|+.-++...| ++..
T Consensus 207 ~~~~~~~~g-e~~l~d~l~~l~~~g-~v~~ 234 (269)
T 4ecm_A 207 KELKPSARG-ELEITDINNWYLKRG-VLTY 234 (269)
T ss_dssp TSCCBCTTS-CBCHHHHHHHHHHTT-CEEE
T ss_pred hhcCCCCCC-eeeHHHHHHHHHHcC-CEEE
Confidence 654332110 022355655666666 5543
|
| >2d0j_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 2; rossmann-like fold, glucuronyltransferase; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=84.32 E-value=9.9 Score=38.87 Aligned_cols=43 Identities=30% Similarity=0.345 Sum_probs=29.8
Q ss_pred CCcEEEEEEeCCCCh--HHHHHHHHHHHhcCccccccEEEEEECCCCCC
Q psy1765 51 LPSTSVIICFYNEHP--ATLYRSVQTLLSRTGQSLLHEIILVNDFSEYP 97 (867)
Q Consensus 51 ~P~vSVIIp~yNe~~--~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~ 97 (867)
+|.|-||.|+|.... ..|-+..++|. +-+ ++ -.|||+|+..-.
T Consensus 2 ~p~I~vVTPTy~R~~Q~a~LtRLa~TL~-~Vp-~l--~WIVVEd~~~~~ 46 (246)
T 2d0j_A 2 LPTIYAITPTYSRPVQKAELTRLANTFR-QVA-QL--HWILVEDAAARS 46 (246)
T ss_dssp CCCEEEEEEECCSTTHHHHHHHHHHHHT-TST-TE--EEEEEESSSSCC
T ss_pred CCEEEEEeCCCCccchhHHHHHHHHHHh-cCC-ce--EEEEEcCCCCCC
Confidence 689999999998653 24555555554 443 45 789999987643
|
| >3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A* | Back alignment and structure |
|---|
Probab=81.74 E-value=7.9 Score=40.17 Aligned_cols=56 Identities=13% Similarity=0.060 Sum_probs=46.1
Q ss_pred CCEEEEEcCCCcCchhHHhHhhhhcCCCEEEEEcCCcccCcc----chHHHHHHHHhcCC
Q psy1765 178 GRVHLYRTSKREGLIRARMFGAKYATGKVLVFLDSHIEVNTH----WLEPLLVPIAERTN 233 (867)
Q Consensus 178 ~~vrii~~~~n~G~a~ArN~G~~~A~Gd~llfLDaD~~v~p~----wLe~Ll~~l~~~~~ 233 (867)
..+.++..++..|.+.|.-.|+.....+.++++.+|..+.++ .+..+++.+.+...
T Consensus 95 ~~i~~~~~~~~~Gt~~al~~a~~~l~~~~~lv~~~D~~~~~~~~~~~l~~l~~~~~~~~~ 154 (281)
T 3juk_A 95 CCFSYVRQKQMKGLGHAILTGEALIGNEPFAVILADDLCISHDHPSVLKQMTSLYQKYQC 154 (281)
T ss_dssp CEEEEEECSSCCCHHHHHHHTHHHHCSSCEEEECTTEEEECTTSCCHHHHHHHHHHHHCS
T ss_pred ccEEEEecCCCCCcHHHHHHHHHHcCCCCEEEEeCCeeccCccchHHHHHHHHHHHHcCC
Confidence 357778887788999999888887766889999999988887 79999998876554
|
| >1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A* | Back alignment and structure |
|---|
Probab=81.57 E-value=18 Score=40.44 Aligned_cols=57 Identities=12% Similarity=0.092 Sum_probs=45.6
Q ss_pred CEEEEEcCCCcCchhHHhHhhhhcC--CCEEEEEcCCcc-cCccchHHHHHHHHhcCCce
Q psy1765 179 RVHLYRTSKREGLIRARMFGAKYAT--GKVLVFLDSHIE-VNTHWLEPLLVPIAERTNTV 235 (867)
Q Consensus 179 ~vrii~~~~n~G~a~ArN~G~~~A~--Gd~llfLDaD~~-v~p~wLe~Ll~~l~~~~~~v 235 (867)
.+.++..+...|.+.+.-.|++... .+.++++++|.. +.+..++.+++.+.+....+
T Consensus 75 ~i~~v~~~~~~G~~~sl~~a~~~~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~ 134 (468)
T 1hm9_A 75 QTEFVTQSEQLGTGHAVMMTEPILEGLSGHTLVIAGDTPLITGESLKNLIDFHINHKNVA 134 (468)
T ss_dssp SSEEEECSSCCCHHHHHHTTHHHHTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSE
T ss_pred CcEEEeCCccCChHHHHHHHHHHhccCCCeEEEEeCCccccCHHHHHHHHHHHHhcCCcE
Confidence 5777777777899988888887765 689999999996 58889999999887655433
|
| >3cu0_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 3; glcat-I, glycosyltransferase, heparan sulfate biosynthesis, glycoprotein; HET: GAL UDP; 1.90A {Homo sapiens} SCOP: c.68.1.7 PDB: 1kws_A* 1fgg_A* | Back alignment and structure |
|---|
Probab=80.87 E-value=11 Score=39.21 Aligned_cols=43 Identities=28% Similarity=0.210 Sum_probs=27.6
Q ss_pred CCCCcEEEEEEeCCCCh--HHHHHHHHHHHhcCccccccEEEEEECCCC
Q psy1765 49 STLPSTSVIICFYNEHP--ATLYRSVQTLLSRTGQSLLHEIILVNDFSE 95 (867)
Q Consensus 49 ~~~P~vSVIIp~yNe~~--~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~ 95 (867)
..+|.|-||.|+|.... ..|-+.-+.|. +-+ ++ -.|||+|+..
T Consensus 18 ~~~p~IivVTPTy~R~~Q~a~LtRLa~TL~-~Vp-~L--~WIVVEd~~~ 62 (281)
T 3cu0_A 18 GSHMTIYVVTPTYARLVQKAELVRLSQTLS-LVP-RL--HWLLVEDAEG 62 (281)
T ss_dssp ---CEEEEEEEECCSTTHHHHHHHHHHHHT-TSS-SE--EEEEEESSSS
T ss_pred CCCCeEEEEeCCCCCcchhHHHHHHHHHHh-cCC-ce--EEEEEcCCCC
Confidence 56799999999998543 24445444443 333 66 7899999764
|
| >4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A* | Back alignment and structure |
|---|
Probab=80.59 E-value=12 Score=41.61 Aligned_cols=62 Identities=13% Similarity=0.092 Sum_probs=45.8
Q ss_pred HHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhcC-CCEEEEEcCCc-ccCccchHHHHHHHHh
Q psy1765 166 GEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYAT-GKVLVFLDSHI-EVNTHWLEPLLVPIAE 230 (867)
Q Consensus 166 ~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A~-Gd~llfLDaD~-~v~p~wLe~Ll~~l~~ 230 (867)
+.+.+++.. ..+.++..+...|.+.+.-.|++... .+.++++++|. .+.+..++.+++.+.+
T Consensus 63 ~~i~~~~~~---~~~~~v~~~~~~g~~~~i~~~~~~~~~~~~~lv~~~D~P~i~~~~i~~l~~~~~~ 126 (459)
T 4fce_A 63 ELLKKTLAD---PSLNWVLQAEQLGTGHAMQQAAPHFADDEDILMLYGDVPLISVDTLQRLLAAKPE 126 (459)
T ss_dssp HHHHHHC--------CEEECSSCCCHHHHHHHHGGGSCTTSEEEEEETTCTTCCHHHHHHHHHHCCT
T ss_pred HHHHHHhcc---CCcEEEeCCCCCCcHHHHHHHHHhcCCCCcEEEEeCCcccCCHHHHHHHHHHHhh
Confidence 345555543 25777877878899999999988876 48999999999 4688899999988754
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 867 | ||||
| d1xhba2 | 328 | c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosa | 1e-64 | |
| d1xhba2 | 328 | c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosa | 5e-24 | |
| d1xhba2 | 328 | c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosa | 3e-18 | |
| d1xhba2 | 328 | c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosa | 8e-05 | |
| d2bo4a1 | 381 | c.68.1.18 (A:2-382) Mannosylglycerate synthase, MG | 3e-37 | |
| d2bo4a1 | 381 | c.68.1.18 (A:2-382) Mannosylglycerate synthase, MG | 3e-14 | |
| d2bo4a1 | 381 | c.68.1.18 (A:2-382) Mannosylglycerate synthase, MG | 5e-06 | |
| d1xhba1 | 131 | b.42.2.1 (A:423-553) Polypeptide N-acetylgalactosa | 4e-09 | |
| d1xhba1 | 131 | b.42.2.1 (A:423-553) Polypeptide N-acetylgalactosa | 6e-04 | |
| d1ggpb1 | 126 | b.42.2.1 (B:11-140) Plant cytotoxin B-chain (lecti | 5e-07 | |
| d1m2tb2 | 126 | b.42.2.1 (B:385-510) Plant cytotoxin B-chain (lect | 3e-04 | |
| d1dqga_ | 134 | b.42.2.2 (A:) Mannose receptor {Mouse (Mus musculu | 4e-04 | |
| d1dqga_ | 134 | b.42.2.2 (A:) Mannose receptor {Mouse (Mus musculu | 0.004 | |
| d2aaib2 | 127 | b.42.2.1 (B:136-262) Plant cytotoxin B-chain (lect | 0.002 | |
| d1abrb2 | 127 | b.42.2.1 (B:141-267) Plant cytotoxin B-chain (lect | 0.004 |
| >d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Score = 218 bits (555), Expect = 1e-64
Identities = 134/277 (48%), Positives = 181/277 (65%), Gaps = 5/277 (1%)
Query: 147 LLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKV 206
++ EI+LV+D SE L +ES+VK L VH+ R +R GLIRAR+ GA + G+V
Sbjct: 53 MIEEIVLVDDASERDF-LKRPLESYVKKLKV-PVHVIRMEQRSGLIRARLKGAAVSRGQV 110
Query: 207 LVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYT-SSALVRGGFNWGLH 265
+ FLD+H E WLEPLL I TV PIID+I+ DTF+Y S + GGFNW L+
Sbjct: 111 ITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLN 170
Query: 266 FKWENLPKGTLNSSE-DFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELS 324
F+W +P+ ++ + D P+ +PTMAGGLF+IDR YF +G YDAG++IWGGENLE+S
Sbjct: 171 FRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEIS 230
Query: 325 FRIWMCGGSLAMIPCSRIGHVFRSRRPYNN-GHNEDPLTRNSLRVAHVWMDEYIEHFLKQ 383
FRIW CGG+L ++ CS +GHVFR PY G + +N+ R+A VWMDE+ F
Sbjct: 231 FRIWQCGGTLEIVTCSHVGHVFRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFYII 290
Query: 384 RPEARNIDYGDVTDRKQLRARLGCKSFKWYLDNVYPE 420
P +DYGD++ R LR +L CK F WYL+N+YP+
Sbjct: 291 SPGVTKVDYGDISSRLGLRRKLQCKPFSWYLENIYPD 327
|
| >d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Score = 101 bits (253), Expect = 5e-24
Identities = 29/71 (40%), Positives = 40/71 (56%)
Query: 441 PKFQPWYSRARNYTNSLRVAHVWMDEYIEHFLKQRPEARNIDYGDVTDRKQLRARLGCKS 500
P P + N+ R+A VWMDE+ F P +DYGD++ R LR +L CK
Sbjct: 257 PYTFPGGTGQIINKNNRRLAEVWMDEFKNFFYIISPGVTKVDYGDISSRLGLRRKLQCKP 316
Query: 501 FKWYLDNVYPE 511
F WYL+N+YP+
Sbjct: 317 FSWYLENIYPD 327
|
| >d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Score = 84.6 bits (208), Expect = 3e-18
Identities = 27/68 (39%), Positives = 46/68 (67%)
Query: 31 DRKIPDTRNSLCANQTFPSTLPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILV 90
+R +PD R C + +P LP+TSV+I F+NE +TL R+V ++++R+ + ++ EI+LV
Sbjct: 1 NRSLPDVRLEGCKTKVYPDNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLV 60
Query: 91 NDFSEYPS 98
+D SE
Sbjct: 61 DDASERDF 68
|
| >d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Score = 43.4 bits (101), Expect = 8e-05
Identities = 10/16 (62%), Positives = 14/16 (87%)
Query: 626 LRCKSFKWYLDNVYPE 641
L+CK F WYL+N+YP+
Sbjct: 312 LQCKPFSWYLENIYPD 327
|
| >d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]} Length = 381 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: MGS-like domain: Mannosylglycerate synthase, MGS species: Rhodothermus marinus [TaxId: 29549]
Score = 142 bits (358), Expect = 3e-37
Identities = 47/443 (10%), Positives = 92/443 (20%), Gaps = 130/443 (29%)
Query: 54 TSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLND 113
+ V+ F +EHP L +V+ + +HE++ + +
Sbjct: 1 SLVVFPFKHEHPEVLLHNVRVAAA---HPRVHEVLCIGYERD------------------ 39
Query: 114 GRVHLYRTSKREGLIRARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVK 173
+ R + L E +
Sbjct: 40 ----------QTYEAVERAAPEISRATGTPVSVRLQERL--------------------- 68
Query: 174 GLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLVFLDSHI-EVNTHWLEPLLVPIAERT 232
R K +G+ A + + + + F D+ I W+
Sbjct: 69 -------GTLRPGKGDGMNTALRYFLEETQWERIHFYDADITSFGPDWITKAEEAADFG- 120
Query: 233 NTVTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSPTMA 292
Y A W + L + I P
Sbjct: 121 -----------YGLVRHYFPRASTDAMITWMITRTGFALLWPH-----TELSWIEQPL-- 162
Query: 293 GGLFAIDRQYFDSL-------GQYDAGLEIW-----------------GGENLELSFR-- 326
GG + R+ L + D G++ +
Sbjct: 163 GGELLMRREVAAMLYEDERVRRRSDWGIDTLYTFVTVQQGVSIYECYIPEGKAHRLYGGL 222
Query: 327 -------------IWMCGGSLAMIPCSRIGHVFRSRRPYNNGHNEDPLTRNSLRVAHVWM 373
I + P R P + +L
Sbjct: 223 DDLRTMLVECFAAIQSLQHEVVGQPAIHRQ-EHPHRVPVHIAERVGYDVEATLHRLMQHW 281
Query: 374 DEYIEHFLKQRPEARNIDYGDVTDRKQLRARLGCKSFKWYLDNVYPEMILPSDDEERLKK 433
L+ + ++ A + + + E +
Sbjct: 282 TPRQVELLELFTTP---VREGLRTCQRRPA-FNFMDEMAWAATYHVLL-------EHFQP 330
Query: 434 KWAQVEQPKFQPWYSRARNYTNS 456
E+ F+ W +R NYT +
Sbjct: 331 GDPDWEELLFKLWTTRVLNYTMT 353
|
| >d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]} Length = 381 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: MGS-like domain: Mannosylglycerate synthase, MGS species: Rhodothermus marinus [TaxId: 29549]
Score = 73.1 bits (179), Expect = 3e-14
Identities = 12/106 (11%), Positives = 26/106 (24%), Gaps = 11/106 (10%)
Query: 452 NYTNSLRVAHVWMDEYIEHFLKQRPEARNIDYGDVTDRKQLRARLGCKSFKWYLDNVYPE 511
+ +L L+ + ++ A + +
Sbjct: 269 DVEATLHRLMQHWTPRQVELLELFTTP---VREGLRTCQRRPA-FNFMDEMAWAATYHVL 324
Query: 512 MILPSDDEERLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSSTDL 557
+ E + E+ F+ W +R NYT +R
Sbjct: 325 L-------EHFQPGDPDWEELLFKLWTTRVLNYTMTVALRGYDYAQ 363
|
| >d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]} Length = 381 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: MGS-like domain: Mannosylglycerate synthase, MGS species: Rhodothermus marinus [TaxId: 29549]
Score = 47.3 bits (112), Expect = 5e-06
Identities = 10/83 (12%), Positives = 20/83 (24%), Gaps = 14/83 (16%)
Query: 605 ATKPKLTKCHEMGGSQEYWCWLRCKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKF 664
+ L C + + + + + E+ F
Sbjct: 295 PVREGLRTCQRRPA-------FNFMDEMAWAATYHVLL-------EHFQPGDPDWEELLF 340
Query: 665 QPWYSRARNYTSHFHIRLSGTDL 687
+ W +R NYT +R
Sbjct: 341 KLWTTRVLNYTMTVALRGYDYAQ 363
|
| >d1xhba1 b.42.2.1 (A:423-553) Polypeptide N-acetylgalactosaminyltransferase 1, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 131 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Polypeptide N-acetylgalactosaminyltransferase 1, C-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Score = 53.3 bits (127), Expect = 4e-09
Identities = 31/131 (23%), Positives = 52/131 (39%), Gaps = 5/131 (3%)
Query: 672 RNYTSHFHIRLSGTDLCLTSKVDKTKGSPLVLKKCDELSKTQRWSKTDKSELVLAELLCL 731
R+Y S IR T+ CL + + + + + C + Q +S T E+ + LCL
Sbjct: 4 RHYFSLGEIRNVETNQCLDNM-ARKENEKVGIFNCHGMGGNQVFSYTANKEIRTDD-LCL 61
Query: 732 DA--GATKPKLTKCHEMGGSQEWNFVLRDKTPIYSPATGTCLGSKNRLENTVIVMEMCAQ 789
D + KCH + G+Q W + K + + CL ++ V + C
Sbjct: 62 DVSKLNGPVTMLKCHHLKGNQLWEYD-PVKLTLQHVNSNQCLDKATEEDSQVPSIRDCTG 120
Query: 790 HKDTSWDLVPV 800
+ W L V
Sbjct: 121 SRSQQWLLRNV 131
|
| >d1xhba1 b.42.2.1 (A:423-553) Polypeptide N-acetylgalactosaminyltransferase 1, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 131 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Polypeptide N-acetylgalactosaminyltransferase 1, C-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Score = 38.7 bits (89), Expect = 6e-04
Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Query: 542 RNYTSHFHIRLSSTDLCLTSKVDKTKGSPLVLKKCDELSKTQHWSKTDKSELVLAELLCL 601
R+Y S IR T+ CL + + + + + C + Q +S T E+ + LCL
Sbjct: 4 RHYFSLGEIRNVETNQCLDNM-ARKENEKVGIFNCHGMGGNQVFSYTANKEIRTDD-LCL 61
Query: 602 DA--GATKPKLTKCHEMGGSQEYWCW 625
D + KCH + G+Q +
Sbjct: 62 DVSKLNGPVTMLKCHHLKGNQLWEYD 87
|
| >d1ggpb1 b.42.2.1 (B:11-140) Plant cytotoxin B-chain (lectin) {Mongolian snake-gourd (Trichosanthes kirilowii), Lectin 1 [TaxId: 3677]} Length = 126 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Mongolian snake-gourd (Trichosanthes kirilowii), Lectin 1 [TaxId: 3677]
Score = 47.1 bits (111), Expect = 5e-07
Identities = 23/119 (19%), Positives = 47/119 (39%), Gaps = 5/119 (4%)
Query: 680 IRLSGTD-LCLTSKVDKTKGSPLVLKKCDELSKTQRWSKTDKSELVLAELLCLDAGA--T 736
+R++G D C + G+ ++LKKC E + Q W+ ++ + A A
Sbjct: 6 VRIAGRDGFCADVNGEGQNGAAIILKKCAE-NDNQLWTLKREATIRSNGGCLTTAAAEQA 64
Query: 737 KPKLTKCHEMGGSQEWNFVLRDKTPIYSPATGTCLGSKNRLENTVIVMEMCAQHKDTSW 795
K + C + ++ + + D I +PA+ L S + ++ + W
Sbjct: 65 KAGIYDCTQ-ATAELSAWEIADNGTIINPASSLVLSSGAANSLLDLGVQTNSYASAQGW 122
|
| >d1m2tb2 b.42.2.1 (B:385-510) Plant cytotoxin B-chain (lectin) {European mistletoe (Viscum album) [TaxId: 3972]} Length = 126 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: European mistletoe (Viscum album) [TaxId: 3972]
Score = 39.4 bits (91), Expect = 3e-04
Identities = 23/133 (17%), Positives = 46/133 (34%), Gaps = 15/133 (11%)
Query: 675 TSHFHIRLSG-TDLCLTSKVDKTKGSPLVLKKCDELSKTQRWSKTDKSELVLAELLCL-- 731
T+ + G DLC+ + G + ++ C + QRW+ + +L
Sbjct: 1 TAPRETTIYGFRDLCME-----SAGGSVYVETCTAGQENQRWALYGDGSIRPKQLQSQCL 55
Query: 732 ----DAGATKPKLTKCHEMGGSQEWNFVLRDKTPIYSPATGTCLGSKNRLEN-TVIVMEM 786
D+ +T + C Q W F ++ I + G + + I++
Sbjct: 56 TNGRDSISTVINIVSCSAGSSGQRWVF--TNEGAILNLKNGLAMDVAQANPSLQRIIIYP 113
Query: 787 CAQHKDTSWDLVP 799
+ + W VP
Sbjct: 114 ATGNPNQMWLPVP 126
|
| >d1dqga_ b.42.2.2 (A:) Mannose receptor {Mouse (Mus musculus) [TaxId: 10090]} Length = 134 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Cysteine rich domain domain: Mannose receptor species: Mouse (Mus musculus) [TaxId: 10090]
Score = 39.1 bits (90), Expect = 4e-04
Identities = 21/126 (16%), Positives = 38/126 (30%), Gaps = 13/126 (10%)
Query: 675 TSHFHIRLSGTDLCLTSKVDKTKGSPLVLKKCDELSKTQRWSKT-DKSELVLAELLCLDA 733
F I C+ D + C+ +++Q++ D + +A LCL
Sbjct: 2 ARQFLIYNEDHKRCV----DALSAISVQTATCNPEAESQKFRWVSDSQIMSVAFKLCLGV 57
Query: 734 GA----TKPKLTKCHEMGGSQEWNFVLRDKTPIYSPATGTCLGSKNRLENTVIVMEMCAQ 789
+ L C Q+W ++ T T NR E + +
Sbjct: 58 PSKTDWASVTLYACDSKSEYQKW--ECKNDTLFGIKGTELYFNYGNRQEKNIKL--YKGS 113
Query: 790 HKDTSW 795
+ W
Sbjct: 114 GLWSRW 119
|
| >d1dqga_ b.42.2.2 (A:) Mannose receptor {Mouse (Mus musculus) [TaxId: 10090]} Length = 134 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Cysteine rich domain domain: Mannose receptor species: Mouse (Mus musculus) [TaxId: 10090]
Score = 36.0 bits (82), Expect = 0.004
Identities = 16/91 (17%), Positives = 27/91 (29%), Gaps = 3/91 (3%)
Query: 665 QPWYSRARNYTSHFHIRLSGTDLCLTSKVDKTKGSPLVLKKCDELSKTQRWSKTDKSELV 724
S+ + S I LCL KT + + L CD S+ Q+W + +
Sbjct: 31 PEAESQKFRWVSDSQIMSVAFKLCLGVP-SKTDWASVTLYACDSKSEYQKWECKNDTLFG 89
Query: 725 LAELLCLDA--GATKPKLTKCHEMGGSQEWN 753
+ + + G W
Sbjct: 90 IKGTELYFNYGNRQEKNIKLYKGSGLWSRWK 120
|
| >d2aaib2 b.42.2.1 (B:136-262) Plant cytotoxin B-chain (lectin) {Castor bean (Ricinus communis), Ricin [TaxId: 3988]} Length = 127 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Castor bean (Ricinus communis), Ricin [TaxId: 3988]
Score = 36.8 bits (84), Expect = 0.002
Identities = 17/117 (14%), Positives = 34/117 (29%), Gaps = 14/117 (11%)
Query: 686 DLCLTSKVDKTKGSPLVLKKCDELSKTQRWSKTDKSELVLAELLCLD------AGATKPK 739
LCL + ++ C Q+W+ + + T K
Sbjct: 14 GLCLQ-----ANSGQVWIEDCSSEKAEQQWALYADGSIRPQQNRDNCLTSDSNIRETVVK 68
Query: 740 LTKCHEMGGSQEWNFVLRDKTPIYSPATGTCLGSKNRLEN-TVIVMEMCAQHKDTSW 795
+ C Q W F ++ I + +G L + + I++ + W
Sbjct: 69 ILSCGPASSGQRWMF--KNDGTILNLYSGLVLDVRASDPSLKQIILYPLHGDPNQIW 123
|
| >d1abrb2 b.42.2.1 (B:141-267) Plant cytotoxin B-chain (lectin) {Abrus precatorius [TaxId: 3816]} Length = 127 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Abrus precatorius [TaxId: 3816]
Score = 36.1 bits (82), Expect = 0.004
Identities = 15/121 (12%), Positives = 31/121 (25%), Gaps = 16/121 (13%)
Query: 599 LCLDAGATKPKLTKCHEMGGSQEYWCW----LRCKSFKWYLDNVYPEMILPSDDEDRLKK 654
LC+ A + + C Q++ + +R K+
Sbjct: 15 LCMQAQGSNVWMADCDSNKKEQQWALYTDGSIRSVQNTNN-----------CLTSKDHKQ 63
Query: 655 KWAQVEQPKFQPWYSRARNYTSHFHIRLSGTDLCLTSKVDKTKGSPLVLKKCDELSKTQR 714
+ W S+ + + I D+ + K ++L Q
Sbjct: 64 GSTILLMGCSNGWASQRWVFKNDGSIYSLYDDMVMDVKGSDPSLKQIILWPYTG-KPNQI 122
Query: 715 W 715
W
Sbjct: 123 W 123
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 867 | |||
| d1xhba2 | 328 | Polypeptide N-acetylgalactosaminyltransferase 1, N | 100.0 | |
| d1qg8a_ | 255 | Spore coat polysaccharide biosynthesis protein Sps | 99.91 | |
| d1knma_ | 129 | Xylan binding domain, CBM13 (Endo-1,4-beta-xylanas | 99.84 | |
| d1xhba1 | 131 | Polypeptide N-acetylgalactosaminyltransferase 1, C | 99.83 | |
| d1omza_ | 265 | Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga | 99.82 | |
| d1vcla2 | 133 | Hemolytic lectin CEL-III, domains 1 and 2 {Cucumar | 99.8 | |
| d2zqna1 | 130 | 29-kDa galactose-binding lectin {Lumbricus terrest | 99.8 | |
| d1xhba1 | 131 | Polypeptide N-acetylgalactosaminyltransferase 1, C | 99.8 | |
| d1ggpb1 | 126 | Plant cytotoxin B-chain (lectin) {Mongolian snake- | 99.78 | |
| d1knma_ | 129 | Xylan binding domain, CBM13 (Endo-1,4-beta-xylanas | 99.77 | |
| d1m2tb2 | 126 | Plant cytotoxin B-chain (lectin) {European mistlet | 99.77 | |
| d1vcla1 | 150 | Hemolytic lectin CEL-III, domains 1 and 2 {Cucumar | 99.77 | |
| d1ggpb2 | 128 | Plant cytotoxin B-chain (lectin) {Mongolian snake- | 99.76 | |
| d1hwmb2 | 131 | Plant cytotoxin B-chain (lectin) {Sambucus ebulus, | 99.75 | |
| d2bo4a1 | 381 | Mannosylglycerate synthase, MGS {Rhodothermus mari | 99.74 | |
| d2aaib2 | 127 | Plant cytotoxin B-chain (lectin) {Castor bean (Ric | 99.74 | |
| d1ggpb1 | 126 | Plant cytotoxin B-chain (lectin) {Mongolian snake- | 99.74 | |
| d1hwmb1 | 133 | Plant cytotoxin B-chain (lectin) {Sambucus ebulus, | 99.72 | |
| d1abrb2 | 127 | Plant cytotoxin B-chain (lectin) {Abrus precatoriu | 99.72 | |
| d1vcla1 | 150 | Hemolytic lectin CEL-III, domains 1 and 2 {Cucumar | 99.7 | |
| d1abrb1 | 140 | Plant cytotoxin B-chain (lectin) {Abrus precatoriu | 99.69 | |
| d1vcla2 | 133 | Hemolytic lectin CEL-III, domains 1 and 2 {Cucumar | 99.69 | |
| d1m2tb1 | 136 | Plant cytotoxin B-chain (lectin) {European mistlet | 99.68 | |
| d1m2tb2 | 126 | Plant cytotoxin B-chain (lectin) {European mistlet | 99.68 | |
| d1rzob1 | 135 | Plant cytotoxin B-chain (lectin) {Castor bean (Ric | 99.68 | |
| d1abrb1 | 140 | Plant cytotoxin B-chain (lectin) {Abrus precatoriu | 99.66 | |
| d2aaib2 | 127 | Plant cytotoxin B-chain (lectin) {Castor bean (Ric | 99.65 | |
| d2zqna1 | 130 | 29-kDa galactose-binding lectin {Lumbricus terrest | 99.65 | |
| d1abrb2 | 127 | Plant cytotoxin B-chain (lectin) {Abrus precatoriu | 99.65 | |
| d1hwmb2 | 131 | Plant cytotoxin B-chain (lectin) {Sambucus ebulus, | 99.64 | |
| d1ggpb2 | 128 | Plant cytotoxin B-chain (lectin) {Mongolian snake- | 99.63 | |
| d2ihoa1 | 154 | Agglutinin MOA, N-terminal domain {Fairy-ring mush | 99.6 | |
| d1hwmb1 | 133 | Plant cytotoxin B-chain (lectin) {Sambucus ebulus, | 99.6 | |
| d1m2tb1 | 136 | Plant cytotoxin B-chain (lectin) {European mistlet | 99.58 | |
| d1rzob1 | 135 | Plant cytotoxin B-chain (lectin) {Castor bean (Ric | 99.55 | |
| d1qxma2 | 138 | Hemagglutinin component Ha1 {Clostridium botulinum | 99.52 | |
| d1xhba2 | 328 | Polypeptide N-acetylgalactosaminyltransferase 1, N | 99.45 | |
| d1sr4a_ | 167 | Cytolethal distending toxin subunit A {Haemophilus | 99.44 | |
| d1qxma1 | 145 | Hemagglutinin component Ha1 {Clostridium botulinum | 99.44 | |
| d1dqga_ | 134 | Mannose receptor {Mouse (Mus musculus) [TaxId: 100 | 99.43 | |
| d2ihoa1 | 154 | Agglutinin MOA, N-terminal domain {Fairy-ring mush | 99.41 | |
| d1dqga_ | 134 | Mannose receptor {Mouse (Mus musculus) [TaxId: 100 | 99.4 | |
| d1qxma2 | 138 | Hemagglutinin component Ha1 {Clostridium botulinum | 99.24 | |
| d1upsa2 | 131 | GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosi | 99.23 | |
| d1qxma1 | 145 | Hemagglutinin component Ha1 {Clostridium botulinum | 99.18 | |
| d1pzta_ | 271 | beta 1,4 galactosyltransferase (b4GalT1) {Cow (Bos | 99.1 | |
| d1sr4a_ | 167 | Cytolethal distending toxin subunit A {Haemophilus | 98.98 | |
| d1upsa2 | 131 | GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosi | 98.65 | |
| d1fo8a_ | 343 | N-acetylglucosaminyltransferase I {Rabbit (Oryctol | 97.73 | |
| d2bo4a1 | 381 | Mannosylglycerate synthase, MGS {Rhodothermus mari | 90.85 | |
| d1v82a_ | 252 | Beta-1,3-glucuronyltransferase 1, GlcAT-P {Human ( | 81.61 |
| >d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=3.5e-62 Score=537.48 Aligned_cols=324 Identities=47% Similarity=0.931 Sum_probs=279.8
Q ss_pred CCCCCCCCccccccccCCCCCCcEEEEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhh
Q psy1765 31 DRKIPDTRNSLCANQTFPSTLPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKG 110 (867)
Q Consensus 31 ~r~~~~~r~~~c~~~~~~~~~P~vSVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~ 110 (867)
+|.+||.|++.|+.+.|+..+|+||||||+|||+..+|.+||+||++|||+..+.|||||||||+|++
T Consensus 1 ~~~~~~~r~~~~~~~~~~~~~P~vSIIIp~yNe~~~~l~~~l~Si~~qt~~~~~~EIIvVDdgS~d~~------------ 68 (328)
T d1xhba2 1 NRSLPDVRLEGCKTKVYPDNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDF------------ 68 (328)
T ss_dssp CCCCCCCSCGGGGTCCCCSCCCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGG------------
T ss_pred CCCCCCCCChhhhhccCCCCCCCEEEEEeccCCcHHHHHHHHHHHHhcCCCCCCeEEEEEECCCChhh------------
Confidence 58999999999999999999999999999999887789999999999999987779999999999982
Q ss_pred cCCCceEEEEeccchhhHHHhhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcC
Q psy1765 111 LNDGRVHLYRTSKREGLIRARMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREG 190 (867)
Q Consensus 111 ~~~~~~~~~~~~~~~gi~~a~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G 190 (867)
+.+.++++++.. ..+|+++++++|.|
T Consensus 69 -----------------------------------------------------~~~~l~~~~~~~-~~~i~vi~~~~n~G 94 (328)
T d1xhba2 69 -----------------------------------------------------LKRPLESYVKKL-KVPVHVIRMEQRSG 94 (328)
T ss_dssp -----------------------------------------------------GTHHHHHHHHSS-SSCEEEEECSSCCC
T ss_pred -----------------------------------------------------HHHHHHHHHHhc-CCCeEEEEeccccc
Confidence 345667777665 36899999999999
Q ss_pred chhHHhHhhhhcCCCEEEEEcCCcccCccchHHHHHHHHhcCCceeeeEEeeecCCCceeccc-cccccccccccccccc
Q psy1765 191 LIRARMFGAKYATGKVLVFLDSHIEVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSS-ALVRGGFNWGLHFKWE 269 (867)
Q Consensus 191 ~a~ArN~G~~~A~Gd~llfLDaD~~v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~~~~~~~~-~~~~g~f~~~l~~~~~ 269 (867)
+++|+|.|++.|+||||+|||+|+++.|+||+.+++.+.+++..+++|.+..++.+++.+... ....++|.|.+.+.+.
T Consensus 95 ~~~a~N~Gi~~a~gd~i~flD~D~~~~p~~l~~l~~~~~~~~~~~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (328)
T d1xhba2 95 LIRARLKGAAVSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWY 174 (328)
T ss_dssp HHHHHHHHHHHCCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEE
T ss_pred chHHHHHHHHhhhcceeeecCcccccChhHHHHHHHHHhcCCCeEEecceeeeccCceeeccCCcccccccccccccccc
Confidence 999999999999999999999999999999999999999999999999998898888877643 4556778888777766
Q ss_pred cCCcCcCC-CCCCCCCcccccccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEcccEEEEEecc
Q psy1765 270 NLPKGTLN-SSEDFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGHVFRS 348 (867)
Q Consensus 270 ~~~~~~~~-~~~~~~~p~~~~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V~H~~r~ 348 (867)
..+..... .......+..+++++|+||+++|++|+++|||||.|++||+||+|||+|++++|+++.++|+++|+|++|.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~f~~vGgfDe~~~~~g~ED~Dl~~R~~~~G~~i~~~p~~~v~H~~~~ 254 (328)
T d1xhba2 175 PVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVGHVFRK 254 (328)
T ss_dssp ECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHTTSCCTTSCTTCCCCSHHHHHHHHTTCEEEEEEEEEEEEEC--
T ss_pred ccchhhhhccccccccccccceecceeeeeeHHHHHHhCCCCCCCcCcCchHHHHHHHHHHhCCeEEEeCCeEEEEeCCC
Confidence 55543321 22334456778899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCC-CchhhhhhHHHHHhcHHHHHHHHhhcCCCcCCCCCCCchhHHHHHHHcCCcccccccccccCC
Q psy1765 349 RRPYNNGHN-EDPLTRNSLRVAHVWMDEYIEHFLKQRPEARNIDYGDVTDRKQLRARLGCKSFKWYLDNVYPE 420 (867)
Q Consensus 349 ~~~y~~~~~-~~~~~rN~~R~a~~w~d~~~~~~y~~~p~~~~~~~gdi~~r~~lr~~l~ck~F~Wyl~~v~p~ 420 (867)
+.++..+.. .....+|.+|++++|||+|++.||..+|.+..+++||+++|++||++|+||+|+|||++||||
T Consensus 255 ~~~~~~~~~~~~~~~~N~~r~~e~wl~~yk~~~~~~~~~~~~~~~~~i~~r~~Lr~~l~ck~f~w~~~~~~~~ 327 (328)
T d1xhba2 255 ATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFYIISPGVTKVDYGDISSRLGLRRKLQCKPFSWYLENIYPD 327 (328)
T ss_dssp ----------CHHHHHHHHHHHHHHCGGGGHHHHHTSTTGGGSCCCCCHHHHHHHHHTTCCCHHHHHHHTCTT
T ss_pred CCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhCcccccCCcccHHHHHHHHHHhCCCChHHHHhhCCCC
Confidence 998886654 456789999999999999999999999999999999999999999999999999999999997
|
| >d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: Spore coat polysaccharide biosynthesis protein SpsA domain: Spore coat polysaccharide biosynthesis protein SpsA species: Bacillus subtilis [TaxId: 1423]
Probab=99.91 E-value=8.3e-25 Score=229.16 Aligned_cols=199 Identities=12% Similarity=0.146 Sum_probs=141.8
Q ss_pred CcEEEEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHHHh
Q psy1765 52 PSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRAR 131 (867)
Q Consensus 52 P~vSVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~a~ 131 (867)
|+||||||+||++. .|.+||+||++||++++ |||||||+|+|++
T Consensus 1 P~vSiiip~yN~~~-~l~~~l~Si~~Qt~~~~--eiivvdd~S~d~t--------------------------------- 44 (255)
T d1qg8a_ 1 PKVSVIMTSYNKSD-YVAKSISSILSQTFSDF--ELFIMDDNSNEET--------------------------------- 44 (255)
T ss_dssp CCEEEEEEESSCTT-THHHHHHHHHTCSCCCE--EEEEEECSCCHHH---------------------------------
T ss_pred CEEEEEEecCCCHH-HHHHHHHHHHhCCCCCe--EEEEEECCCCccH---------------------------------
Confidence 89999999999875 99999999999999998 9999999999983
Q ss_pred hhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcC--------CCcCchhHHhHhhhhcC
Q psy1765 132 MFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTS--------KREGLIRARMFGAKYAT 203 (867)
Q Consensus 132 ~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~--------~n~G~a~ArN~G~~~A~ 203 (867)
.+.+.++.. ..++++++.+ ++.|+++|+|.|++.|+
T Consensus 45 ---------------------------------~~~l~~~~~---~~~i~~~~~~~~~~~~~~~~~g~~~a~N~gi~~a~ 88 (255)
T d1qg8a_ 45 ---------------------------------LNVIRPFLN---DNRVRFYQSDISGVKERTEKTRYAALINQAIEMAE 88 (255)
T ss_dssp ---------------------------------HHHHGGGGG---STTEEEEECCCCSHHHHHSSCHHHHHHHHHHHHCC
T ss_pred ---------------------------------HHHHHHhhh---hcccccccccccccccccccchhcccccccccccc
Confidence 233333332 2578888764 68999999999999999
Q ss_pred CCEEEEEcCCcccCccchHHHHHHHHhcCC-ceeeeEEeeecCC-CceeccccccccccccccccccccCCcCcCCCCCC
Q psy1765 204 GKVLVFLDSHIEVNTHWLEPLLVPIAERTN-TVTVPIIDIINAD-TFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSED 281 (867)
Q Consensus 204 Gd~llfLDaD~~v~p~wLe~Ll~~l~~~~~-~vv~p~i~~i~~~-~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~ 281 (867)
||||+|||+|+.+.|+||+.+++.+..++. +++.+.......+ ..... .... ........
T Consensus 89 g~~i~~lD~Dd~~~p~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-----~~~~--------~~~~~~~~----- 150 (255)
T d1qg8a_ 89 GEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIV-----KETV--------RPAAQVTW----- 150 (255)
T ss_dssp CSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC---CEE-----EEEE--------ECCCSCBS-----
T ss_pred cccccccccccccccchHHHHHHHHHhCCCCCeEeecceeeeeCCCCcEe-----eeec--------ccchhhhh-----
Confidence 999999999999999999999999988764 5554433222111 10000 0000 00000000
Q ss_pred CCCcccccccccceEeEeHHHHHHhCC-----CCCCCCCCcccchHHHHHHHHcCCeEEEEcccEEEEE
Q psy1765 282 FIKPILSPTMAGGLFAIDRQYFDSLGQ-----YDAGLEIWGGENLELSFRIWMCGGSLAMIPCSRIGHV 345 (867)
Q Consensus 282 ~~~p~~~~~~~G~~~airR~~f~~vGg-----fDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~s~V~H~ 345 (867)
.......+++++++|++|+++++ ||+....+..||.||++|+. .++++.+++...+.+.
T Consensus 151 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~dl~lrl~-~~~~~~~i~~~l~~~~ 214 (255)
T d1qg8a_ 151 ----NAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVN-HFYPFYPLDEELDLNY 214 (255)
T ss_dssp ----CCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHT-TTCCBEEEEEEEEEEE
T ss_pred ----hhcccccchhHHHHHHHHHHHHHhhCCCccccchhcchhhHHHHHHHH-cCCCEEEecCCEEEEE
Confidence 00112334567899999988743 56666666689999999996 5788888886655443
|
| >d1knma_ b.42.2.1 (A:) Xylan binding domain, CBM13 (Endo-1,4-beta-xylanase C-terminal domain) {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Xylan binding domain, CBM13 (Endo-1,4-beta-xylanase C-terminal domain) species: Streptomyces lividans [TaxId: 1916]
Probab=99.84 E-value=3.8e-21 Score=180.45 Aligned_cols=117 Identities=25% Similarity=0.496 Sum_probs=104.1
Q ss_pred eEEEecCCCceEee-cCCCCCCCceEEecCCCCCCCccEEEccCCcEEeccCceeeeC----CCCcEEEecCCCCCCCeE
Q psy1765 678 FHIRLSGTDLCLTS-KVDKTKGSPLVLKKCDELSKTQRWSKTDKSELVLAELLCLDAG----ATKPKLTKCHEMGGSQEW 752 (867)
Q Consensus 678 ~~i~~~~sg~CLd~-~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~~~~~~~s~~CLD~~----g~~v~~~~C~~~~~~Q~W 752 (867)
+.|++..+|+|||+ +....+|+.|++++|++ ..+|+|.++..+.++..+++|||+. |+.|++++|++. .+|+|
T Consensus 6 ~~i~n~~sg~cLdv~~~~~~~g~~v~~~~c~~-~~~Q~w~~~~~g~i~~~~~~cLd~~~~~~g~~v~~~~c~~~-~~Q~W 83 (129)
T d1knma_ 6 GQIKGVGSGRCLDVPDASTSDGTQLQLWDCHS-GTNQQWAATDAGELRVYGDKCLDAAGTSNGSKVQIYSCWGG-DNQKW 83 (129)
T ss_dssp BCCEETTTCCEEECGGGCCCTTCBCEEECCCS-CGGGCBEECTTSCEEETTTEEEEESCSSTTCBEEEEECCCC-GGGCE
T ss_pred EEEEECCCCCEEEcCCCCCCCCeEEEEeCCCC-CcccceEEcccCcEEecCCcceeeccccCCCEEEEEeCCCC-CeEEE
Confidence 78999999999998 55666789999999998 8899999999999999999999986 568999999985 59999
Q ss_pred EEecCCeeeeecCCCCceeecCCCCC--CCeEEEEecCCCCCceEEEe
Q psy1765 753 NFVLRDKTPIYSPATGTCLGSKNRLE--NTVIVMEMCAQHKDTSWDLV 798 (867)
Q Consensus 753 ~~~~~~~~~i~n~~sg~CLd~~~~~~--g~~v~~~~C~~~~~Q~W~~~ 798 (867)
.|..++. |+|..+++|||+.+.++ |+.|++++|+++++|+|+|+
T Consensus 84 ~~~~~g~--i~~~~s~~cLdv~~~~~~~g~~v~~~~c~~~~~Q~Wt~t 129 (129)
T d1knma_ 84 RLNSDGS--VVGVQSGLCLDAVGNGTANGTLIQLYTCSNGSNQRWTRT 129 (129)
T ss_dssp EECTTSC--EEETTTCCEEEEGGGCCSTTCBEEEECCCCCGGGCEECC
T ss_pred EEeCCce--EEccCCCeEEEECCCCCCCCCEEEEEeCCCCCcceEeeC
Confidence 9997765 88999999999976544 88999999999999999985
|
| >d1xhba1 b.42.2.1 (A:423-553) Polypeptide N-acetylgalactosaminyltransferase 1, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Polypeptide N-acetylgalactosaminyltransferase 1, C-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.83 E-value=1.3e-20 Score=177.33 Aligned_cols=123 Identities=24% Similarity=0.411 Sum_probs=106.4
Q ss_pred ccceEEEecCCCceEeecCCCCCCCceEEecCCCCCCCccEEEccCCcEEeccCceeeeC--CCCcEEEecCCCCCCCeE
Q psy1765 675 TSHFHIRLSGTDLCLTSKVDKTKGSPLVLKKCDELSKTQRWSKTDKSELVLAELLCLDAG--ATKPKLTKCHEMGGSQEW 752 (867)
Q Consensus 675 ~~~~~i~~~~sg~CLd~~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~~~~~~~s~~CLD~~--g~~v~~~~C~~~~~~Q~W 752 (867)
...|.|+|..+++|||+.+ ..+|++|.+++|++...+|+|.++..+.++.. ++|||+. |+.|++++|++..++|+|
T Consensus 7 ~~~G~Irn~~s~~CLd~~~-~~~g~~v~l~~C~~~~~~Q~w~~t~~~~i~~~-~~Cld~~~~~~~v~l~~C~~~~~~Q~W 84 (131)
T d1xhba1 7 FSLGEIRNVETNQCLDNMA-RKENEKVGIFNCHGMGGNQVFSYTANKEIRTD-DLCLDVSKLNGPVTMLKCHHLKGNQLW 84 (131)
T ss_dssp EEEECEEETTTCEEEECTT-CCTTEECEEEECCSCCGGGCEEEETTSCEEET-TEEEECCSTTCCCEEEECCTTCGGGCE
T ss_pred EEEEEEEECCCCccEecCC-CCCCCeEEEEEcCCCCCceEEEEecCceEeeC-CEeeeccCCcccEEEEEecCCCceEEE
Confidence 3458999999999999843 34688899999998778899999999988754 7999987 568999999987779999
Q ss_pred EEecCCeeeeecCCCCceeecCCCCCCCeEEEEecCCCCCceEEEecC
Q psy1765 753 NFVLRDKTPIYSPATGTCLGSKNRLENTVIVMEMCAQHKDTSWDLVPV 800 (867)
Q Consensus 753 ~~~~~~~~~i~n~~sg~CLd~~~~~~g~~v~~~~C~~~~~Q~W~~~~~ 800 (867)
.++.++.. |+|+.||+|||+.....++.|.++.|+++++|+|.|+.+
T Consensus 85 ~~~~~~~~-i~~~~s~~CLd~~~~~~~~~l~~~~C~~~~~Q~W~~~~v 131 (131)
T d1xhba1 85 EYDPVKLT-LQHVNSNQCLDKATEEDSQVPSIRDCTGSRSQQWLLRNV 131 (131)
T ss_dssp EEETTTTE-EEESSSCEEEESCCSSSTTSCEEEECCCCGGGCEEECCC
T ss_pred EEcCCCce-EECCCCCceEeCcccCCCceEEEeCCCCCCccEEEEEEC
Confidence 99976654 899999999999877668899999999999999999864
|
| >d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: Exostosin domain: Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.82 E-value=1e-20 Score=193.96 Aligned_cols=191 Identities=11% Similarity=0.051 Sum_probs=125.5
Q ss_pred CCcEEEEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHHH
Q psy1765 51 LPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRA 130 (867)
Q Consensus 51 ~P~vSVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~a 130 (867)
|-++|||||+||++. .|.+||+||++|++++ |+|||||+|+|++
T Consensus 2 ~~~~tvii~tyn~~~-~l~~~l~sl~~q~~~~---~~iiV~d~~sd~~-------------------------------- 45 (265)
T d1omza_ 2 LDSFTLIMQTYNRTD-LLLRLLNHYQAVPSLH---KVIVVWNNVGEKG-------------------------------- 45 (265)
T ss_dssp TTCEEEEEEESSCHH-HHHHHHHHHTTSTTEE---EEEEEECCTTCCC--------------------------------
T ss_pred CCcEEEEEEcCCCHH-HHHHHHHHHHcCCCcC---eEEEEECCCCCcc--------------------------------
Confidence 458999999999765 9999999999999987 6677777776662
Q ss_pred hhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEEEEEcCCCcCchhHHhHhhhhcCCCEEEEE
Q psy1765 131 RMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVHLYRTSKREGLIRARMFGAKYATGKVLVFL 210 (867)
Q Consensus 131 ~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vrii~~~~n~G~a~ArN~G~~~A~Gd~llfL 210 (867)
.+.+.+.... ..++++...+|.|.+.|+|.|++.|+||||+||
T Consensus 46 ----------------------------------~~~i~~~~~~---~~~~~~~~~~~~g~~~a~n~~~~~a~ge~i~~l 88 (265)
T d1omza_ 46 ----------------------------------PEELWNSLGP---HPIPVIFKPQTANKMRNRLQVFPEVETNAVLMV 88 (265)
T ss_dssp ----------------------------------THHHHHHTCC---CSSCEEEEECSSCCGGGGGSCCTTCCSSEEEEE
T ss_pred ----------------------------------HHHHHHHhcc---cceEEEEecCCCCchhhhhhhHHhCCcCEEEEe
Confidence 1222332222 344455556699999999999999999999999
Q ss_pred cCCcccCccchHHHHHHHHhcCCceeeeEE-eeecCCCceeccccccccccccccccccccCCcCcCCCCCCCCCccccc
Q psy1765 211 DSHIEVNTHWLEPLLVPIAERTNTVTVPII-DIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSEDFIKPILSP 289 (867)
Q Consensus 211 DaD~~v~p~wLe~Ll~~l~~~~~~vv~p~i-~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~~~~~p~~~~ 289 (867)
|+|+.++|+||+.+++.+.+++..+|+... ...+.....+.. .+...+.. .........
T Consensus 89 D~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~----~~~~~~~~----------------~~~~~~~~~ 148 (265)
T d1omza_ 89 DDDTLISAQDLVFAFSIWQQFPDQIIGFVPRKHVSTSSGIYSY----GGFELQTP----------------GPGNGDQYS 148 (265)
T ss_dssp CTTEEECHHHHHHHHHHHTTSTTSEEESCEEEEEEEETTEEEE----ECTTSCCC----------------SSSSSCCBS
T ss_pred CcccCCCHHHHHHHHHHHHhCCCcceecccccccccCCccccc----cccccccc----------------ccccccccc
Confidence 999999999999999999988876554322 111111111100 00000000 000111123
Q ss_pred ccccceEeEeHHHHHHhCCCCCCCC-----CCcccchHHHHHHHHcCCeE
Q psy1765 290 TMAGGLFAIDRQYFDSLGQYDAGLE-----IWGGENLELSFRIWMCGGSL 334 (867)
Q Consensus 290 ~~~G~~~airR~~f~~vGgfDe~~~-----~~G~ED~Dls~Rl~~~G~~i 334 (867)
...+..++++|++++..+.+.+... ....+|.++...+...++..
T Consensus 149 ~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 198 (265)
T d1omza_ 149 MVLIGASFFNSKYLELFQKQPAAVHALIDETQNCDDIAMNFLVTRHTGKP 198 (265)
T ss_dssp EECTTEEEEETHHHHHHHTSCHHHHHHHHHHTCCHHHHHHHHHHHHHSSC
T ss_pred eeccceeEecHHHHHHHhhhHHHHhhhhhhhcchHHHHHHHHHHHhcCCc
Confidence 4446677899999987776655321 11267888888876655543
|
| >d1vcla2 b.42.2.1 (A:151-283) Hemolytic lectin CEL-III, domains 1 and 2 {Cucumaria echinata [TaxId: 40245]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Hemolytic lectin CEL-III, domains 1 and 2 species: Cucumaria echinata [TaxId: 40245]
Probab=99.80 E-value=6.5e-20 Score=172.81 Aligned_cols=119 Identities=18% Similarity=0.339 Sum_probs=101.6
Q ss_pred ceEEEecCCCceEeecCCCCCCCceEEecCCCCCCCccEEEccCCcEE-eccCceeeeC----CCCcEEEecCCCCCCCe
Q psy1765 677 HFHIRLSGTDLCLTSKVDKTKGSPLVLKKCDELSKTQRWSKTDKSELV-LAELLCLDAG----ATKPKLTKCHEMGGSQE 751 (867)
Q Consensus 677 ~~~i~~~~sg~CLd~~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~~~~~-~~s~~CLD~~----g~~v~~~~C~~~~~~Q~ 751 (867)
.+.|+|..+++|||+.+ ..+|+.|++++|++ ..+|+|.++..+.++ ..+++|||+. |+.|++|+|+++ .+|+
T Consensus 5 ~g~I~n~~sg~CLdv~~-~~~g~~v~~~~c~~-~~~Q~w~~~~~g~~~~~~s~~cLd~~~~~~~~~v~~~~c~~~-~~Q~ 81 (133)
T d1vcla2 5 YGRLRNEKSDLCLDVEG-SDGKGNVLMYSCED-NLDQWFRYYENGEIVNAKSGMCLDVEGSDGSGNVGIYRCDDL-RDQM 81 (133)
T ss_dssp EEEEEETTTCCEEEESS-SSSCEEEEEECCCS-CGGGCEEEETTSCEEETTTCCEEEESSSSSCSBEEEECCCCC-GGGC
T ss_pred EEEEEECCCCCEEEeCC-CCCCCeEEEEecCC-CccEEEEEecccceeeccCCceeeeccccCCCeeEEEEeCCC-ccce
Confidence 47899999999999943 34688999999998 889999999888776 4479999986 458999999985 5999
Q ss_pred EEEec----CCeeeeecCCCCceeecCCCCCCCeEEEEecCCCCCceEEEe
Q psy1765 752 WNFVL----RDKTPIYSPATGTCLGSKNRLENTVIVMEMCAQHKDTSWDLV 798 (867)
Q Consensus 752 W~~~~----~~~~~i~n~~sg~CLd~~~~~~g~~v~~~~C~~~~~Q~W~~~ 798 (867)
|.+.. ++...|+|.++++|||+.+.++|+.|++++|+++++|+|+|.
T Consensus 82 W~~~~~~~~~~~~~i~~~~s~~cLd~~~~~~g~~v~~~~c~~~~~Q~W~f~ 132 (133)
T d1vcla2 82 WSRPNAYCNGDYCSFLNKESNKCLDVSGDQGTGDVGTWQCDGLPDQRFKWV 132 (133)
T ss_dssp EECCGGGCBTTEECCEETTTCCEEEESSSSSCSBEEEECCCCCGGGCEEEE
T ss_pred EEEcccccCCccEEEEEcCCCCEEEecCCCCCceEEEEcCCCCHHhCEEEe
Confidence 99852 334458999999999998877788999999999999999985
|
| >d2zqna1 b.42.2.1 (A:131-260) 29-kDa galactose-binding lectin {Lumbricus terrestris [TaxId: 6398]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: 29-kDa galactose-binding lectin species: Lumbricus terrestris [TaxId: 6398]
Probab=99.80 E-value=6.4e-20 Score=172.17 Aligned_cols=120 Identities=10% Similarity=0.030 Sum_probs=103.3
Q ss_pred eEEEecCCCceEee-cCCCCCCCceEEecCCCC--CCCccEEEccCCcEEe-ccCceeeeCCCCcEEEecCCCCCCCeEE
Q psy1765 678 FHIRLSGTDLCLTS-KVDKTKGSPLVLKKCDEL--SKTQRWSKTDKSELVL-AELLCLDAGATKPKLTKCHEMGGSQEWN 753 (867)
Q Consensus 678 ~~i~~~~sg~CLd~-~~~~~~g~~v~l~~C~~~--~~~Q~W~~~~~~~~~~-~s~~CLD~~g~~v~~~~C~~~~~~Q~W~ 753 (867)
+.|++..||+|||+ +.+..+|+.|.+++|+.. ..+|+|.++..+.++. .+++|||++|+.|++|+|+++. +|+|.
T Consensus 4 y~I~~~~sg~~LDv~g~~~~~Ga~v~~w~~~~~~g~~nQ~W~~~~~g~i~~~~~~~~ld~~G~~v~~~~c~~~~-~qqW~ 82 (130)
T d2zqna1 4 FYIKSELNGKVLDIEGQNPAPGSKIITWDQKKGPTAVNQLWYTDQQGVIRSKLNDFAIDASHEQIETQPFDPNN-PKRAW 82 (130)
T ss_dssp EEEEETTTSCEEEEGGGCCSTTCBEEEECCCCSGGGGGGCEEECTTSCEEETTTCCEEECSSSSCEEECCCTTC-GGGCE
T ss_pred EEEEECCCCCEEEeCCCCCCCCceEEEEEecCCCCCcceEEEEeccCCEEEccccccccccCcceEEeccCCCc-ccEEE
Confidence 68999999999999 556778999999997642 4579999999988874 4789999999999999999864 89999
Q ss_pred EecCCeeeeecCCCCceeecCCCCC--CCeEEEEecCCCCCceEEEec
Q psy1765 754 FVLRDKTPIYSPATGTCLGSKNRLE--NTVIVMEMCAQHKDTSWDLVP 799 (867)
Q Consensus 754 ~~~~~~~~i~n~~sg~CLd~~~~~~--g~~v~~~~C~~~~~Q~W~~~~ 799 (867)
+..++.+ +.+.++++|||+.+.++ |+.|++|+|+++++|+|.|.+
T Consensus 83 ~~~~g~~-~~~~~~~~~LDv~~~~~~~G~~v~~~~~~g~~nQ~W~l~~ 129 (130)
T d2zqna1 83 IVSGNTI-AQLSDRDIVLDIIKSDKEAGAHICAWKQHGGPNQKFIIES 129 (130)
T ss_dssp EEETTEE-EETTEEEEEEEEGGGCCSTTCBEEEEECCCCGGGCEEEEE
T ss_pred EcCCCeE-EEeccCCeEEECCCCCCCCCCEEEEEcCCCCccceEEEee
Confidence 9877764 66778999999976544 999999999999999999974
|
| >d1xhba1 b.42.2.1 (A:423-553) Polypeptide N-acetylgalactosaminyltransferase 1, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Polypeptide N-acetylgalactosaminyltransferase 1, C-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.80 E-value=1.1e-19 Score=170.77 Aligned_cols=123 Identities=22% Similarity=0.429 Sum_probs=101.9
Q ss_pred cccceeeeecCCCceecccCCCCCCCcEEEEecCCCCCCceeeecCCCceEEeeceeeecC--CCccEEEeCCCCCCCcc
Q psy1765 544 YTSHFHIRLSSTDLCLTSKVDKTKGSPLVLKKCDELSKTQHWSKTDKSELVLAELLCLDAG--ATKPKLTKCHEMGGSQE 621 (867)
Q Consensus 544 ~~~~g~ir~~~~~~CLD~~~~~~~g~~v~l~~C~~~~~~Q~w~~t~~~~i~~~~~~CLd~~--g~~v~l~~C~~~~~~Q~ 621 (867)
+++.|+|||.++++|||+.+. .+|++|++++|++..++|+|+|+.+++|+. +++|||+. ++.++++.|++..++|.
T Consensus 6 ~~~~G~Irn~~s~~CLd~~~~-~~g~~v~l~~C~~~~~~Q~w~~t~~~~i~~-~~~Cld~~~~~~~v~l~~C~~~~~~Q~ 83 (131)
T d1xhba1 6 YFSLGEIRNVETNQCLDNMAR-KENEKVGIFNCHGMGGNQVFSYTANKEIRT-DDLCLDVSKLNGPVTMLKCHHLKGNQL 83 (131)
T ss_dssp EEEEECEEETTTCEEEECTTC-CTTEECEEEECCSCCGGGCEEEETTSCEEE-TTEEEECCSTTCCCEEEECCTTCGGGC
T ss_pred cEEEEEEEECCCCccEecCCC-CCCCeEEEEEcCCCCCceEEEEecCceEee-CCEeeeccCCcccEEEEEecCCCceEE
Confidence 456788999999999998763 579999999999988899999999999985 56999987 45689999999888887
Q ss_pred eeeeeeeccceeeecccCcccccCCChhhhhhhhhccccCCCCCcccccccccccceEEEecCCCceEeecCCCCCCCce
Q psy1765 622 YWCWLRCKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSGTDLCLTSKVDKTKGSPL 701 (867)
Q Consensus 622 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~~~~~~~~~i~~~~sg~CLd~~~~~~~g~~v 701 (867)
| .|+ . ..+.|+|..+++|||+. ...++..+
T Consensus 84 W-~~~--------------------------------------------~----~~~~i~~~~s~~CLd~~-~~~~~~~l 113 (131)
T d1xhba1 84 W-EYD--------------------------------------------P----VKLTLQHVNSNQCLDKA-TEEDSQVP 113 (131)
T ss_dssp E-EEE--------------------------------------------T----TTTEEEESSSCEEEESC-CSSSTTSC
T ss_pred E-EEc--------------------------------------------C----CCceEECCCCCceEeCc-ccCCCceE
Confidence 4 432 1 12578999999999984 33467889
Q ss_pred EEecCCCCCCCccEEEcc
Q psy1765 702 VLKKCDELSKTQRWSKTD 719 (867)
Q Consensus 702 ~l~~C~~~~~~Q~W~~~~ 719 (867)
++++|++ +++|+|.|+.
T Consensus 114 ~~~~C~~-~~~Q~W~~~~ 130 (131)
T d1xhba1 114 SIRDCTG-SRSQQWLLRN 130 (131)
T ss_dssp EEEECCC-CGGGCEEECC
T ss_pred EEeCCCC-CCccEEEEEE
Confidence 9999998 7899999975
|
| >d1ggpb1 b.42.2.1 (B:11-140) Plant cytotoxin B-chain (lectin) {Mongolian snake-gourd (Trichosanthes kirilowii), Lectin 1 [TaxId: 3677]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Mongolian snake-gourd (Trichosanthes kirilowii), Lectin 1 [TaxId: 3677]
Probab=99.78 E-value=1.4e-19 Score=168.89 Aligned_cols=111 Identities=18% Similarity=0.365 Sum_probs=94.5
Q ss_pred CCCceEeecCCCCCCCceEEecCCCCCCCccEEEccCCcEEeccCceeeeC---CCCcEEEecCCCC-CCCeEEEecCCe
Q psy1765 684 GTDLCLTSKVDKTKGSPLVLKKCDELSKTQRWSKTDKSELVLAELLCLDAG---ATKPKLTKCHEMG-GSQEWNFVLRDK 759 (867)
Q Consensus 684 ~sg~CLd~~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~~~~~~~s~~CLD~~---g~~v~~~~C~~~~-~~Q~W~~~~~~~ 759 (867)
.+|+|||+.+...+|++|++++|++ +.+|+|.|+..++++ .+++|||+. |+.|++++|++.. ..|+|.+..++.
T Consensus 11 ~~G~CLDv~g~~~~G~~v~l~~C~g-~~nQ~w~~~~~g~ir-~~g~CLd~~~~~g~~V~l~~C~~~~~q~~~W~~~~~g~ 88 (126)
T d1ggpb1 11 RDGFCADVNGEGQNGAAIILKKCAE-NDNQLWTLKREATIR-SNGGCLTTAAAEQAKAGIYDCTQATAELSAWEIADNGT 88 (126)
T ss_dssp GGGEEEEESSSCCSSCBEEEEECCC-CTTTEEEEETTSCCB-SSSSEEEEECSSSCEEEEECTTTSCHHHHCCEECTTSC
T ss_pred CCCeEEecCCCCCCCCEEEEEccCC-CCcccEEEccceEEE-ecceEeeeccCCCccEEEEecCCCCcccEEEEEcCCCc
Confidence 3699999955556788999999999 889999999988775 458999975 6689999999754 134899987764
Q ss_pred eeeecCCCCceeecCCCCCCCeEEEEecCCCCCceEEEe
Q psy1765 760 TPIYSPATGTCLGSKNRLENTVIVMEMCAQHKDTSWDLV 798 (867)
Q Consensus 760 ~~i~n~~sg~CLd~~~~~~g~~v~~~~C~~~~~Q~W~~~ 798 (867)
|+|++||+|||+.+...|+.|++++|+++++|+|+|.
T Consensus 89 --i~n~~sg~cLd~~~~~~g~~l~~~~~~~~~~Q~W~~~ 125 (126)
T d1ggpb1 89 --IINPASSLVLSSGAANSLLDLGVQTNSYASAQGWRTG 125 (126)
T ss_dssp --EEETTTTEEEECSSSCTTEECEEECCCCCSTTCCEES
T ss_pred --EEccccceeEEecCCCCCceEEEEeCCCCcccccCcC
Confidence 8999999999998776799999999999999999984
|
| >d1knma_ b.42.2.1 (A:) Xylan binding domain, CBM13 (Endo-1,4-beta-xylanase C-terminal domain) {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Xylan binding domain, CBM13 (Endo-1,4-beta-xylanase C-terminal domain) species: Streptomyces lividans [TaxId: 1916]
Probab=99.77 E-value=3.8e-19 Score=166.55 Aligned_cols=118 Identities=26% Similarity=0.451 Sum_probs=96.9
Q ss_pred eeeeecCCCceecccCCC-CCCCcEEEEecCCCCCCceeeecCCCceEEeeceeeecC----CCccEEEeCCCCCCCcce
Q psy1765 548 FHIRLSSTDLCLTSKVDK-TKGSPLVLKKCDELSKTQHWSKTDKSELVLAELLCLDAG----ATKPKLTKCHEMGGSQEY 622 (867)
Q Consensus 548 g~ir~~~~~~CLD~~~~~-~~g~~v~l~~C~~~~~~Q~w~~t~~~~i~~~~~~CLd~~----g~~v~l~~C~~~~~~Q~~ 622 (867)
|.|++.++++|||+.++. .+|++|.+|+||+. .+|+|.++.++.|+..+++|||+. |+.|+++.|++. .+|.|
T Consensus 6 ~~i~n~~sg~cLdv~~~~~~~g~~v~~~~c~~~-~~Q~w~~~~~g~i~~~~~~cLd~~~~~~g~~v~~~~c~~~-~~Q~W 83 (129)
T d1knma_ 6 GQIKGVGSGRCLDVPDASTSDGTQLQLWDCHSG-TNQQWAATDAGELRVYGDKCLDAAGTSNGSKVQIYSCWGG-DNQKW 83 (129)
T ss_dssp BCCEETTTCCEEECGGGCCCTTCBCEEECCCSC-GGGCBEECTTSCEEETTTEEEEESCSSTTCBEEEEECCCC-GGGCE
T ss_pred EEEEECCCCCEEEcCCCCCCCCeEEEEeCCCCC-cccceEEcccCcEEecCCcceeeccccCCCEEEEEeCCCC-CeEEE
Confidence 567778999999988754 57999999999974 699999999999999999999986 356899999874 44553
Q ss_pred eeeeeeccceeeecccCcccccCCChhhhhhhhhccccCCCCCcccccccccccceEEEecCCCceEee-cCCCCCCCce
Q psy1765 623 WCWLRCKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSGTDLCLTS-KVDKTKGSPL 701 (867)
Q Consensus 623 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~~~~~~~~~i~~~~sg~CLd~-~~~~~~g~~v 701 (867)
.| . ..+.|++..+++|||+ +.+..+|+.|
T Consensus 84 -~~--------------------------------------------~-----~~g~i~~~~s~~cLdv~~~~~~~g~~v 113 (129)
T d1knma_ 84 -RL--------------------------------------------N-----SDGSVVGVQSGLCLDAVGNGTANGTLI 113 (129)
T ss_dssp -EE--------------------------------------------C-----TTSCEEETTTCCEEEEGGGCCSTTCBE
T ss_pred -EE--------------------------------------------e-----CCceEEccCCCeEEEECCCCCCCCCEE
Confidence 32 1 2367999999999999 5566778999
Q ss_pred EEecCCCCCCCccEEEc
Q psy1765 702 VLKKCDELSKTQRWSKT 718 (867)
Q Consensus 702 ~l~~C~~~~~~Q~W~~~ 718 (867)
.+++|++ +.+|+|+++
T Consensus 114 ~~~~c~~-~~~Q~Wt~t 129 (129)
T d1knma_ 114 QLYTCSN-GSNQRWTRT 129 (129)
T ss_dssp EEECCCC-CGGGCEECC
T ss_pred EEEeCCC-CCcceEeeC
Confidence 9999998 789999875
|
| >d1m2tb2 b.42.2.1 (B:385-510) Plant cytotoxin B-chain (lectin) {European mistletoe (Viscum album) [TaxId: 3972]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: European mistletoe (Viscum album) [TaxId: 3972]
Probab=99.77 E-value=5.7e-19 Score=164.66 Aligned_cols=114 Identities=21% Similarity=0.396 Sum_probs=95.6
Q ss_pred eEEEecCCCceEeecCCCCCCCceEEecCCCCCCCccEEEccCCcEEec--cCceeeeC----CCCcEEEecCCCCCCCe
Q psy1765 678 FHIRLSGTDLCLTSKVDKTKGSPLVLKKCDELSKTQRWSKTDKSELVLA--ELLCLDAG----ATKPKLTKCHEMGGSQE 751 (867)
Q Consensus 678 ~~i~~~~sg~CLd~~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~~~~~~~--s~~CLD~~----g~~v~~~~C~~~~~~Q~ 751 (867)
..|. ..+++|||+. |+.|.+++|++++++|+|.++..+.++.. +++|||+. |+.|.++.|+....+|+
T Consensus 6 ~~~~-g~~~lCLda~-----G~~v~l~~C~~~~~~Q~W~l~~~g~ir~~~~~~~CL~~~~~~~g~~v~l~~C~~g~~~Q~ 79 (126)
T d1m2tb2 6 TTIY-GFRDLCMESA-----GGSVYVETCTAGQENQRWALYGDGSIRPKQLQSQCLTNGRDSISTVINIVSCSAGSSGQR 79 (126)
T ss_dssp EEEE-CGGGCEEEEE-----TTEEEEECCCTTCGGGCEEECTTSCEEETTCTTEEEECSSCSTTCBCEEEESTTCCGGGC
T ss_pred EEEE-CccccCCccC-----CCeEEEEecCCCCcceEEEEcCCCcEEeccCcceeeeecCCCCCCeEEEEeecCCCccce
Confidence 3455 4589999984 56799999987678999999999988854 58999976 45899999987666999
Q ss_pred EEEecCCeeeeecCCCCceeecCCCCC-CCeEEEEecCCCCCceEEEec
Q psy1765 752 WNFVLRDKTPIYSPATGTCLGSKNRLE-NTVIVMEMCAQHKDTSWDLVP 799 (867)
Q Consensus 752 W~~~~~~~~~i~n~~sg~CLd~~~~~~-g~~v~~~~C~~~~~Q~W~~~~ 799 (867)
|.|..++. |+|+.||+|||+.+... |+.|++|+|+++++|+|.++|
T Consensus 80 W~~~~~g~--i~n~~sg~cLDv~g~~~~g~~v~~~~c~g~~nQ~W~~~P 126 (126)
T d1m2tb2 80 WVFTNEGA--ILNLKNGLAMDVAQANPSLQRIIIYPATGNPNQMWLPVP 126 (126)
T ss_dssp EEECTTSC--EEETTTCCEEEEGGGCGGGCCEEEECCCCCGGGCCEEEC
T ss_pred EEEecCce--EEecCCCceEeccCCCCCCCeEEEEcCCCChhhcEEcCC
Confidence 99997765 89999999999976433 889999999999999999976
|
| >d1vcla1 b.42.2.1 (A:1-150) Hemolytic lectin CEL-III, domains 1 and 2 {Cucumaria echinata [TaxId: 40245]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Hemolytic lectin CEL-III, domains 1 and 2 species: Cucumaria echinata [TaxId: 40245]
Probab=99.77 E-value=4e-19 Score=170.94 Aligned_cols=123 Identities=18% Similarity=0.234 Sum_probs=99.0
Q ss_pred cceEEEecCCCceEeecCCCCCCCceEEecCCCCCCCccEEEccCCcEEe-ccCceeeeCCC---CcEEEec----CCCC
Q psy1765 676 SHFHIRLSGTDLCLTSKVDKTKGSPLVLKKCDELSKTQRWSKTDKSELVL-AELLCLDAGAT---KPKLTKC----HEMG 747 (867)
Q Consensus 676 ~~~~i~~~~sg~CLd~~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~~~~~~-~s~~CLD~~g~---~v~~~~C----~~~~ 747 (867)
..+.|++..+++|||+.+. ..++.|.+++|++ ..+|+|.++..++++. .+++|||+.++ .+.++.| ++.
T Consensus 9 ~~G~irn~~sg~CLDv~g~-~~~~~v~~~~C~g-~~~Q~w~~~~~g~ir~~~s~~cLd~~~~~~~~~~~~~~~~~~~g~- 85 (150)
T d1vcla1 9 DIGELRSFKSKQCVDIVGN-QGSGNIATYDCDG-LSDQQIIICGDGTIRNEARNYCFTPDGSGNANVMSSPCTLYPEIP- 85 (150)
T ss_dssp EEECEEETTTCCEEEESSS-SSCEEEEEECCCC-CGGGSEEEETTSCEEESSSSEEEEESSSSSEEEEEEECCCSSSCC-
T ss_pred ccEEEEECCCCccEEcCCC-CCCCeeEEEeccC-CcceEEEEEccccEEEeccCceEeecCCCCCceEEEEEEecCCCC-
Confidence 3589999999999999433 3567899999999 7899999999988874 57999998743 4455544 553
Q ss_pred CCCeEEEecCC-----------eeeeecCCCCceeecCCCCCCCeEEEEecCCCCCceEEEecCC
Q psy1765 748 GSQEWNFVLRD-----------KTPIYSPATGTCLGSKNRLENTVIVMEMCAQHKDTSWDLVPVG 801 (867)
Q Consensus 748 ~~Q~W~~~~~~-----------~~~i~n~~sg~CLd~~~~~~g~~v~~~~C~~~~~Q~W~~~~~~ 801 (867)
.+|+|.+...+ ...|+|+.||+|||+.+...++.|+++.|+++++|+|.|.+.+
T Consensus 86 ~~Q~W~~~~~~~~~~~~~~~~~~~~i~n~~sg~CLdv~g~~~~~~v~~~~C~g~~~Q~w~f~s~g 150 (150)
T d1vcla1 86 SSQRWRQGRRKTFTDNGGIEQVATEIINLASGKCLDIEGSDGTGDIGVYDCQNLDDQYFYVRSRG 150 (150)
T ss_dssp GGGCEEEEEEEEEECTTSCEEEEEEEEETTTCCEEEESSSSSCSBEEEECCCCCGGGCEEECCCC
T ss_pred cccEEEEcCCCcccccccccccceEEEECCCCCEEeeccCCCCccEEEEeCCCCccCcEEEecCC
Confidence 58999986432 2248999999999998876788999999999999999997653
|
| >d1ggpb2 b.42.2.1 (B:141-267) Plant cytotoxin B-chain (lectin) {Mongolian snake-gourd (Trichosanthes kirilowii), Lectin 1 [TaxId: 3677]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Mongolian snake-gourd (Trichosanthes kirilowii), Lectin 1 [TaxId: 3677]
Probab=99.76 E-value=1.1e-18 Score=163.11 Aligned_cols=114 Identities=18% Similarity=0.260 Sum_probs=94.7
Q ss_pred eEEEecCCCceEeecCCCCCCCceEEecCCCCCCCccEEEccCCcEEec--cCceeeeC----CCCcEEEecCCCCCCCe
Q psy1765 678 FHIRLSGTDLCLTSKVDKTKGSPLVLKKCDELSKTQRWSKTDKSELVLA--ELLCLDAG----ATKPKLTKCHEMGGSQE 751 (867)
Q Consensus 678 ~~i~~~~sg~CLd~~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~~~~~~~--s~~CLD~~----g~~v~~~~C~~~~~~Q~ 751 (867)
.+++...+++|||+.+ .+..|.+++|++++.+|+|.|+.++.++.. +++|||+. |+.|.+++|++. .+|+
T Consensus 6 ~~~~~g~~~lCLd~~~---~~~~v~l~~C~~~~~nQ~W~~~~dg~ir~~~~~~~CL~~~~~~~g~~V~~~~C~~~-~~Q~ 81 (128)
T d1ggpb2 6 VTQISGSAQLCMQAGN---GPANLWMSECRAGKAEQQWALLTDKSIRSETNSDNCLTSAADAGPKTILLALCSGP-ASQR 81 (128)
T ss_dssp EEEEECGGGCEECC-T---TT-BCCEECCCSSCTTSEEEEETTTEEEESSCTTEEECCCCCSSCCCCBEEECCCC-TTSC
T ss_pred EEEEEeeCCcCEecCC---CCceEEEEeCCCCCcceEEEEcCCCCEEEcccCceeEeecccCCCCeEEEEecCCC-cceE
Confidence 4566678999999843 245799999997688999999999988753 58999975 558999999986 5999
Q ss_pred EEEecCCeeeeecCCCCceeecCCCCC-CCeEEEEecCCCCCceEEE
Q psy1765 752 WNFVLRDKTPIYSPATGTCLGSKNRLE-NTVIVMEMCAQHKDTSWDL 797 (867)
Q Consensus 752 W~~~~~~~~~i~n~~sg~CLd~~~~~~-g~~v~~~~C~~~~~Q~W~~ 797 (867)
|.+..++. |+|+.||+|||+.+... ++.|++|+|+++++|+|..
T Consensus 82 W~~~~~g~--i~n~~sg~CLDv~g~~~~g~~v~~~~c~g~~nQ~W~~ 126 (128)
T d1ggpb2 82 WVFDDDGS--ILSLYDDKQMDSEGAAAAAKQIILWWNAAEPNQIWLA 126 (128)
T ss_dssp CEECTTSS--EEETTTTEEEEESSSCCSSSCEEEECCCCCGGGCCEE
T ss_pred EEEeCCCc--EEEeeCCceEecccCCCCCCEEEEEcCCCChhcEEEe
Confidence 99998765 89999999999976544 8899999999999999964
|
| >d1hwmb2 b.42.2.1 (B:136-266) Plant cytotoxin B-chain (lectin) {Sambucus ebulus, ebulin [TaxId: 28503]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Sambucus ebulus, ebulin [TaxId: 28503]
Probab=99.75 E-value=2.6e-18 Score=161.25 Aligned_cols=113 Identities=16% Similarity=0.347 Sum_probs=95.3
Q ss_pred EEEecCCCceEeecCCCCCCCceEEecCCCCCCCccEEEccCCcEEec--cCceeeeC----CCCcEEEecCCCCCCCeE
Q psy1765 679 HIRLSGTDLCLTSKVDKTKGSPLVLKKCDELSKTQRWSKTDKSELVLA--ELLCLDAG----ATKPKLTKCHEMGGSQEW 752 (867)
Q Consensus 679 ~i~~~~sg~CLd~~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~~~~~~~--s~~CLD~~----g~~v~~~~C~~~~~~Q~W 752 (867)
.|+ ..+++|||+.+ .++.|.+++|++++.+|+|.++..+.++.. +++||++. |+.|.+++|++. .+|+|
T Consensus 8 ~i~-g~~~lCLd~~g---~~~~v~l~~C~~~~~~Q~W~l~~~g~i~~~~~~~lCl~~~~~~~g~~v~l~~C~~~-~~q~W 82 (131)
T d1hwmb2 8 LIV-GYNEMCLQANG---ENNNVWMEDCDVTSVQQQWALFDDRTIRVNNSRGLCVTSNGYVSKDLIVIRKCQGL-ATQRW 82 (131)
T ss_dssp EEE-ETTTEEEEEET---TTTEEEEEECCTTCGGGCEEECTTSCEEETTEEEEEEEESCSSTTEEEEEEECCCC-GGGCC
T ss_pred EEE-eeCCcCCCcCC---CCceEEEEecCCCChheEEEEcCCCcEEeccCcceEEeccccCCCCEEEEEEcCCC-cceEE
Confidence 344 57899999853 256899999998778899999999988854 47899976 458999999985 49999
Q ss_pred EEecCCeeeeecCCCCceeecCCCCC-CCeEEEEecCCCCCceEEEe
Q psy1765 753 NFVLRDKTPIYSPATGTCLGSKNRLE-NTVIVMEMCAQHKDTSWDLV 798 (867)
Q Consensus 753 ~~~~~~~~~i~n~~sg~CLd~~~~~~-g~~v~~~~C~~~~~Q~W~~~ 798 (867)
.+..++. |+|+.+++|||+.+... |+.|++++|+++++|+|+|+
T Consensus 83 ~~~~~g~--i~~~~s~~CLdv~g~~~~g~~v~~~~C~~~~~Q~W~~~ 127 (131)
T d1hwmb2 83 FFNSDGS--VVNLKSTRVMDVKESDVSLQEVIIFPATGNPNQQWRTQ 127 (131)
T ss_dssp EECTTSC--EEETTTTEEEEECTTCSSSCBEEEECCCCCGGGCEEEE
T ss_pred EEeCCCe--EEeccCCeEEEecCCCCCCCEEEEECCCCCcccceEee
Confidence 9997765 88999999999976544 78999999999999999996
|
| >d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: MGS-like domain: Mannosylglycerate synthase, MGS species: Rhodothermus marinus [TaxId: 29549]
Probab=99.74 E-value=3.5e-20 Score=202.31 Aligned_cols=235 Identities=12% Similarity=0.072 Sum_probs=155.1
Q ss_pred cCCCcCchhHHhHhhhhcCCCEEEEEcCCc-ccCccchHHHHHHHHhcCCceeeeEEeeecCCCceeccccccccccccc
Q psy1765 185 TSKREGLIRARMFGAKYATGKVLVFLDSHI-EVNTHWLEPLLVPIAERTNTVTVPIIDIINADTFQYTSSALVRGGFNWG 263 (867)
Q Consensus 185 ~~~n~G~a~ArN~G~~~A~Gd~llfLDaD~-~v~p~wLe~Ll~~l~~~~~~vv~p~i~~i~~~~~~~~~~~~~~g~f~~~ 263 (867)
..++.|+..|+..|++.|+||+|+|+|+|. ..+|+||+.|+..+..+ .++|.|..... ...|.+.|.
T Consensus 73 ~GKG~g~~~A~~~g~~~a~gd~lvflDADl~~~~pe~i~~L~~~i~~g-~d~V~g~y~R~-----------~~~grvt~~ 140 (381)
T d2bo4a1 73 PGKGDGMNTALRYFLEETQWERIHFYDADITSFGPDWITKAEEAADFG-YGLVRHYFPRA-----------STDAMITWM 140 (381)
T ss_dssp SSHHHHHHHHHHHHHHHCCCSEEEECCTTCSSCCHHHHHHHHHHHHTT-CSEEEEECCCC-----------TTSCHHHHH
T ss_pred CCCcHHHHHHHHHHHHhCCCCEEEEEcCCcCcCCHHHHHHHHHHHhhh-cCeEEEeeccc-----------cCCCceehH
Confidence 345566667888999999999999999998 57899999999999765 44554432111 111223333
Q ss_pred cccccccCCcCcCCCCCCCCCcccccccccceEeEeHHHHHHhC-----CCCCCCCCCcccchHHHHHHHHcCCeEEEE-
Q psy1765 264 LHFKWENLPKGTLNSSEDFIKPILSPTMAGGLFAIDRQYFDSLG-----QYDAGLEIWGGENLELSFRIWMCGGSLAMI- 337 (867)
Q Consensus 264 l~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~airR~~f~~vG-----gfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~- 337 (867)
+...+...... ......++- ..+|.++++|++++.+- -.+++ | |=|++|.+.+.++|.+|.-+
T Consensus 141 l~~pll~~l~~-----~~~~~~i~d--Pl~G~~a~~R~~~~~L~~~~~v~~~~~---~-G~Di~lt~~A~~~G~rI~EV~ 209 (381)
T d2bo4a1 141 ITRTGFALLWP-----HTELSWIEQ--PLGGELLMRREVAAMLYEDERVRRRSD---W-GIDTLYTFVTVQQGVSIYECY 209 (381)
T ss_dssp THHHHHHHHCT-----TSSGGGCSC--TTCCCEEEEHHHHHHHHHCHHHHTCCS---T-THHHHHHHHHHHTTCCEEEEE
T ss_pred hhHHHHHHHhh-----hhccccccc--CCcccceeeHHHHHHhhhhccccccCC---c-ccchHHHHHHHHcCCeEEecC
Confidence 22222110000 000011111 12688999999998762 12222 3 66899999999999999875
Q ss_pred -cccEEEEEecc-------------------------------CCCCCCC----CCCchhhhhhHHHHHhcHHHHHHHHh
Q psy1765 338 -PCSRIGHVFRS-------------------------------RRPYNNG----HNEDPLTRNSLRVAHVWMDEYIEHFL 381 (867)
Q Consensus 338 -P~s~V~H~~r~-------------------------------~~~y~~~----~~~~~~~rN~~R~a~~w~d~~~~~~y 381 (867)
|.+.+.+.++. ..+...| ........|.++.+..|++.|+..+.
T Consensus 210 i~~~~l~~~f~~v~~~~f~l~~~~~~~W~~~~~~~~~p~~~~g~~~~~~p~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (381)
T d2bo4a1 210 IPEGKAHRLYGGLDDLRTMLVECFAAIQSLQHEVVGQPAIHRQEHPHRVPVHIAERVGYDVEATLHRLMQHWTPRQVELL 289 (381)
T ss_dssp CTTCCCCCCSCCGGGGHHHHHHHHHHHHHHTTCCCCSCCCEEECCCCCCCHHHHTCCCSCHHHHHHHHTSSCCHHHHHHG
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHheecceeccccceeeccCcccCCCCCCCccccCHHHHHHHHHHhhHHHHHHHH
Confidence 66665554331 0112223 44567788899999999999998877
Q ss_pred hcCCCcCCCCCCCchhHHHHHHHcCCcccccccccccCCCcCCCchHHHHhhhhccccCCCCCCCccccccc
Q psy1765 382 KQRPEARNIDYGDVTDRKQLRARLGCKSFKWYLDNVYPEMILPSDDEERLKKKWAQVEQPKFQPWYSRARNY 453 (867)
Q Consensus 382 ~~~p~~~~~~~gdi~~r~~lr~~l~ck~F~Wyl~~v~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~s~~~~~ 453 (867)
+..+. ..+++|.++.++. .+.|.++.|++++|++.+.. ++.+|++++..-++||+++..|+
T Consensus 290 ~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~r~~~~ 350 (381)
T d2bo4a1 290 ELFTT---PVREGLRTCQRRP-AFNFMDEMAWAATYHVLLEH-------FQPGDPDWEELLFKLWTTRVLNY 350 (381)
T ss_dssp GGSCH---HHHHHHHHTTTSC-CCTTCCHHHHHHHHHHHHHH-------CCTTCHHHHHHHHHHHHHHHHHH
T ss_pred HhcCH---HHHHHHHHhcccc-cCCCCcHHHHHHHHHHHHHH-------hhccchhHHHHhhhhHHHHHHHH
Confidence 75542 3467887777765 48899999999999997732 34467778888899999887643
|
| >d2aaib2 b.42.2.1 (B:136-262) Plant cytotoxin B-chain (lectin) {Castor bean (Ricinus communis), Ricin [TaxId: 3988]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Castor bean (Ricinus communis), Ricin [TaxId: 3988]
Probab=99.74 E-value=3.6e-18 Score=159.36 Aligned_cols=110 Identities=18% Similarity=0.311 Sum_probs=93.5
Q ss_pred EEEecCCCceEeecCCCCCCCceEEecCCCCCCCccEEEccCCcEEec--cCceeeeC----CCCcEEEecCCCCCCCeE
Q psy1765 679 HIRLSGTDLCLTSKVDKTKGSPLVLKKCDELSKTQRWSKTDKSELVLA--ELLCLDAG----ATKPKLTKCHEMGGSQEW 752 (867)
Q Consensus 679 ~i~~~~sg~CLd~~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~~~~~~~--s~~CLD~~----g~~v~~~~C~~~~~~Q~W 752 (867)
.|+ ..+++|||+. |+.|.+++|++++.+|+|.++..+.++.. +++|||+. |+.|.+++|+....+|+|
T Consensus 8 ~i~-g~s~lCLd~~-----G~~v~l~~C~~~~~nQ~W~~~~~g~ir~~~~~~~CL~~~~~~~g~~v~~~~C~~~~~~q~W 81 (127)
T d2aaib2 8 TIV-GLYGLCLQAN-----SGQVWIEDCSSEKAEQQWALYADGSIRPQQNRDNCLTSDSNIRETVVKILSCGPASSGQRW 81 (127)
T ss_dssp EEE-CGGGCEEEEE-----TTEEEEECCCTTSSCCCEEECTTSCEEETTSTTEEEEECCSSCSSCEEEEESTTCCTTSCC
T ss_pred EEE-ecCCcCCccC-----CCeEEEEecCCCCcceEEEECCCCcEEEcccccccccccccCCCccEEEEecCCCCCccee
Confidence 454 5699999973 57899999998678999999999999865 47999975 568999999876668999
Q ss_pred EEecCCeeeeecCCCCceeecCCCCC-CCeEEEEecCCCCCceEE
Q psy1765 753 NFVLRDKTPIYSPATGTCLGSKNRLE-NTVIVMEMCAQHKDTSWD 796 (867)
Q Consensus 753 ~~~~~~~~~i~n~~sg~CLd~~~~~~-g~~v~~~~C~~~~~Q~W~ 796 (867)
.+..++. |+|+.||+|||+.+... |+.|++++|+++++|+|.
T Consensus 82 ~~~~~g~--i~~~~sg~CLdv~g~~~~g~~v~~~~C~g~~~Q~W~ 124 (127)
T d2aaib2 82 MFKNDGT--ILNLYSGLVLDVRASDPSLKQIILYPLHGDPNQIWL 124 (127)
T ss_dssp EECTTSC--EECTTTCCEEEEGGGCGGGCCEEEECCCCCGGGCCE
T ss_pred EEecCce--EEeeccCceEEecCCCCCCCEEEEEeCCCCccceeE
Confidence 9987765 89999999999976443 789999999999999995
|
| >d1ggpb1 b.42.2.1 (B:11-140) Plant cytotoxin B-chain (lectin) {Mongolian snake-gourd (Trichosanthes kirilowii), Lectin 1 [TaxId: 3677]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Mongolian snake-gourd (Trichosanthes kirilowii), Lectin 1 [TaxId: 3677]
Probab=99.74 E-value=1.4e-18 Score=162.02 Aligned_cols=119 Identities=18% Similarity=0.360 Sum_probs=94.5
Q ss_pred ceeeeecC-CCceecccCCCCCCCcEEEEecCCCCCCceeeecCCCceEEeeceeeecC---CCccEEEeCCCCCCCcce
Q psy1765 547 HFHIRLSS-TDLCLTSKVDKTKGSPLVLKKCDELSKTQHWSKTDKSELVLAELLCLDAG---ATKPKLTKCHEMGGSQEY 622 (867)
Q Consensus 547 ~g~ir~~~-~~~CLD~~~~~~~g~~v~l~~C~~~~~~Q~w~~t~~~~i~~~~~~CLd~~---g~~v~l~~C~~~~~~Q~~ 622 (867)
.++||+.+ +|+|||+.+...+|++|+||+||+ ..+|+|+|+.+|+|+. .++|||+. ++.|+++.|++...++
T Consensus 3 ~~~~ri~g~~G~CLDv~g~~~~G~~v~l~~C~g-~~nQ~w~~~~~g~ir~-~g~CLd~~~~~g~~V~l~~C~~~~~q~-- 78 (126)
T d1ggpb1 3 AATVRIAGRDGFCADVNGEGQNGAAIILKKCAE-NDNQLWTLKREATIRS-NGGCLTTAAAEQAKAGIYDCTQATAEL-- 78 (126)
T ss_dssp EEEEEEECGGGEEEEESSSCCSSCBEEEEECCC-CTTTEEEEETTSCCBS-SSSEEEEECSSSCEEEEECTTTSCHHH--
T ss_pred ceEEEEecCCCeEEecCCCCCCCCEEEEEccCC-CCcccEEEccceEEEe-cceEeeeccCCCccEEEEecCCCCccc--
Confidence 35667766 799999987666899999999998 4699999999999874 57999976 4568999999764322
Q ss_pred eeeeeeccceeeecccCcccccCCChhhhhhhhhccccCCCCCcccccccccccceEEEecCCCceEeecCCCCCCCceE
Q psy1765 623 WCWLRCKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSGTDLCLTSKVDKTKGSPLV 702 (867)
Q Consensus 623 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~~~~~~~~~i~~~~sg~CLd~~~~~~~g~~v~ 702 (867)
|+|.+ +.+++|+|..+++|||+.+ ...|+.|+
T Consensus 79 ------------------------------------------~~W~~-----~~~g~i~n~~sg~cLd~~~-~~~g~~l~ 110 (126)
T d1ggpb1 79 ------------------------------------------SAWEI-----ADNGTIINPASSLVLSSGA-ANSLLDLG 110 (126)
T ss_dssp ------------------------------------------HCCEE-----CTTSCEEETTTTEEEECSS-SCTTEECE
T ss_pred ------------------------------------------EEEEE-----cCCCcEEccccceeEEecC-CCCCceEE
Confidence 12332 2246799999999999843 45788999
Q ss_pred EecCCCCCCCccEEEc
Q psy1765 703 LKKCDELSKTQRWSKT 718 (867)
Q Consensus 703 l~~C~~~~~~Q~W~~~ 718 (867)
+++|++ +.+|+|++.
T Consensus 111 ~~~~~~-~~~Q~W~~~ 125 (126)
T d1ggpb1 111 VQTNSY-ASAQGWRTG 125 (126)
T ss_dssp EECCCC-CSTTCCEES
T ss_pred EEeCCC-CcccccCcC
Confidence 999998 899999985
|
| >d1hwmb1 b.42.2.1 (B:3-135) Plant cytotoxin B-chain (lectin) {Sambucus ebulus, ebulin [TaxId: 28503]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Sambucus ebulus, ebulin [TaxId: 28503]
Probab=99.72 E-value=1.4e-17 Score=156.67 Aligned_cols=116 Identities=18% Similarity=0.433 Sum_probs=98.6
Q ss_pred eEEEecCCCceEee-cCCCCCCCceEEecCCCCCCCccEEEccCCcEEeccCceeeeC----CCCcEEEecCCCC-CCCe
Q psy1765 678 FHIRLSGTDLCLTS-KVDKTKGSPLVLKKCDELSKTQRWSKTDKSELVLAELLCLDAG----ATKPKLTKCHEMG-GSQE 751 (867)
Q Consensus 678 ~~i~~~~sg~CLd~-~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~~~~~~~s~~CLD~~----g~~v~~~~C~~~~-~~Q~ 751 (867)
..|+ ..+|+|||+ +....+|+.|.+++|++ ..+|+|.|+..+.++. +++|||+. |+.|+++.|+... .+|+
T Consensus 11 ~~i~-~~sG~CLDv~g~~~~~g~~v~~~~C~g-~~~Q~w~~~~~g~~~~-~~~~l~~~~~~~g~~v~~~~c~~~~~~~q~ 87 (133)
T d1hwmb1 11 RRIV-GRDGLCVDVRNGYDTDGTPIQLWPCGT-QRNQQWTFYNDKTIRS-MGKCMTANGLNSGSYIMITDCSTAAEDATK 87 (133)
T ss_dssp EEEE-CGGGCEEEEGGGCCSTTCBEEEECCCC-CGGGCEEECTTSCEEE-TTEEEEESSSSTTCBEEEECTTTSCTTSSC
T ss_pred EEEE-ccCCcEEECCCCCCCCCCEEEEEccCC-CccccEEEecCccEEE-eeeecccCCCCCCCeeEEEecCCCCCceeE
Confidence 4454 568999999 44556789999999998 8999999999887665 47999975 6689999998754 4799
Q ss_pred EEEecCCeeeeecCCCCceeecCCCCCCCeEEEEecCCCCCceEEEe
Q psy1765 752 WNFVLRDKTPIYSPATGTCLGSKNRLENTVIVMEMCAQHKDTSWDLV 798 (867)
Q Consensus 752 W~~~~~~~~~i~n~~sg~CLd~~~~~~g~~v~~~~C~~~~~Q~W~~~ 798 (867)
|.+..++. |+|+.+++|||+.+...|+.|.+++|+++++|+|+|.
T Consensus 88 w~~~~~g~--i~~~~sg~cLd~~~~~~g~~v~~~~c~g~~~Q~W~~~ 132 (133)
T d1hwmb1 88 WEVLIDGS--IINPSSGLVMTAPSGASRTTLLLENNIHAASQGWTVS 132 (133)
T ss_dssp CEEETTTE--EECTTTCCEEECSCSSTTCBCEEECCCCCGGGCCEEE
T ss_pred EEEcCCCC--EEccCCCeEeecccCCCCCEEEEEcCCCCcccceeCC
Confidence 99997764 8999999999998776789999999999999999985
|
| >d1abrb2 b.42.2.1 (B:141-267) Plant cytotoxin B-chain (lectin) {Abrus precatorius [TaxId: 3816]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Abrus precatorius [TaxId: 3816]
Probab=99.72 E-value=6.4e-18 Score=157.66 Aligned_cols=111 Identities=23% Similarity=0.361 Sum_probs=93.7
Q ss_pred EEEecCCCceEeecCCCCCCCceEEecCCCCCCCccEEEccCCcEEec--cCceeeeC----CCCcEEEecCCCCCCCeE
Q psy1765 679 HIRLSGTDLCLTSKVDKTKGSPLVLKKCDELSKTQRWSKTDKSELVLA--ELLCLDAG----ATKPKLTKCHEMGGSQEW 752 (867)
Q Consensus 679 ~i~~~~sg~CLd~~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~~~~~~~--s~~CLD~~----g~~v~~~~C~~~~~~Q~W 752 (867)
.|+ ..+++|||++ |+.|.+++|+++..+|+|.++..+.++.. +++|||+. |+.|.+++|+....+|+|
T Consensus 8 ~i~-g~s~lCld~~-----G~~v~l~~C~~~~~nQ~w~~~~~g~i~~~~~~~~CLd~~~~~~g~~v~l~~c~~~~~~q~W 81 (127)
T d1abrb2 8 SIS-GYSDLCMQAQ-----GSNVWMADCDSNKKEQQWALYTDGSIRSVQNTNNCLTSKDHKQGSTILLMGCSNGWASQRW 81 (127)
T ss_dssp CEE-CGGGCEEEEE-----TTEEEEECCCTTCGGGCEEECTTSCEEETTEEEEEEEESSSSTTCBEEEEESTTCCGGGCC
T ss_pred EEE-ecCCcCCccC-----CceEEEEeCCCCCceEEEEecCCceEEEcCCccEEEeecccCCCceEEEEeccCCCCceEE
Confidence 343 4689999974 57899999998667899999999988855 58999976 558999999876679999
Q ss_pred EEecCCeeeeecCCCCceeecCCCCC-CCeEEEEecCCCCCceEEE
Q psy1765 753 NFVLRDKTPIYSPATGTCLGSKNRLE-NTVIVMEMCAQHKDTSWDL 797 (867)
Q Consensus 753 ~~~~~~~~~i~n~~sg~CLd~~~~~~-g~~v~~~~C~~~~~Q~W~~ 797 (867)
.+..++. |+|+.+++|||+.+... |+.|.+++|+++++|+|..
T Consensus 82 ~~~~~g~--i~~~~s~~CLdv~g~~~~g~~v~~~~C~g~~nQ~W~~ 125 (127)
T d1abrb2 82 VFKNDGS--IYSLYDDMVMDVKGSDPSLKQIILWPYTGKPNQIWLT 125 (127)
T ss_dssp EECTTSC--EEETTTTEEEEEGGGCGGGCCEEEECCCCCGGGCCEE
T ss_pred EEeeceE--EEecCCCceEEcccCCCCCCEEEEEcCCCCccceeEE
Confidence 9987764 89999999999975434 8899999999999999985
|
| >d1vcla1 b.42.2.1 (A:1-150) Hemolytic lectin CEL-III, domains 1 and 2 {Cucumaria echinata [TaxId: 40245]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Hemolytic lectin CEL-III, domains 1 and 2 species: Cucumaria echinata [TaxId: 40245]
Probab=99.70 E-value=2.2e-17 Score=158.52 Aligned_cols=135 Identities=12% Similarity=0.115 Sum_probs=97.8
Q ss_pred cceeeeecCCCceecccCCCCCCCcEEEEecCCCCCCceeeecCCCceEE-eeceeeecCCC---ccEEEeCCC---CCC
Q psy1765 546 SHFHIRLSSTDLCLTSKVDKTKGSPLVLKKCDELSKTQHWSKTDKSELVL-AELLCLDAGAT---KPKLTKCHE---MGG 618 (867)
Q Consensus 546 ~~g~ir~~~~~~CLD~~~~~~~g~~v~l~~C~~~~~~Q~w~~t~~~~i~~-~~~~CLd~~g~---~v~l~~C~~---~~~ 618 (867)
..|+||+..+++|||+.+. ..|+.|.+|+||+. ++|+|+++.+|+|+. .+++|||+.+. .+.+..|.. ...
T Consensus 9 ~~G~irn~~sg~CLDv~g~-~~~~~v~~~~C~g~-~~Q~w~~~~~g~ir~~~s~~cLd~~~~~~~~~~~~~~~~~~~g~~ 86 (150)
T d1vcla1 9 DIGELRSFKSKQCVDIVGN-QGSGNIATYDCDGL-SDQQIIICGDGTIRNEARNYCFTPDGSGNANVMSSPCTLYPEIPS 86 (150)
T ss_dssp EEECEEETTTCCEEEESSS-SSCEEEEEECCCCC-GGGSEEEETTSCEEESSSSEEEEESSSSSEEEEEEECCCSSSCCG
T ss_pred ccEEEEECCCCccEEcCCC-CCCCeeEEEeccCC-cceEEEEEccccEEEeccCceEeecCCCCCceEEEEEEecCCCCc
Confidence 4578888999999999765 45788999999985 589999999999984 56899998743 345665542 234
Q ss_pred CcceeeeeeeccceeeecccCcccccCCChhhhhhhhhccccCCCCCcccccccccccceEEEecCCCceEeecCCCCCC
Q psy1765 619 SQEYWCWLRCKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSGTDLCLTSKVDKTKG 698 (867)
Q Consensus 619 ~Q~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~~~~~~~~~i~~~~sg~CLd~~~~~~~g 698 (867)
+|+| .+. .++ ....+.|.. ...++|+|..+++|||+.+. .++
T Consensus 87 ~Q~W-~~~--~~~-----------------------------~~~~~~~~~-----~~~~~i~n~~sg~CLdv~g~-~~~ 128 (150)
T d1vcla1 87 SQRW-RQG--RRK-----------------------------TFTDNGGIE-----QVATEIINLASGKCLDIEGS-DGT 128 (150)
T ss_dssp GGCE-EEE--EEE-----------------------------EEECTTSCE-----EEEEEEEETTTCCEEEESSS-SSC
T ss_pred ccEE-EEc--CCC-----------------------------ccccccccc-----ccceEEEECCCCCEEeeccC-CCC
Confidence 6764 432 000 011123322 23468999999999999433 467
Q ss_pred CceEEecCCCCCCCccEEEccCC
Q psy1765 699 SPLVLKKCDELSKTQRWSKTDKS 721 (867)
Q Consensus 699 ~~v~l~~C~~~~~~Q~W~~~~~~ 721 (867)
+.|++++|++ +++|+|.|.+.+
T Consensus 129 ~~v~~~~C~g-~~~Q~w~f~s~g 150 (150)
T d1vcla1 129 GDIGVYDCQN-LDDQYFYVRSRG 150 (150)
T ss_dssp SBEEEECCCC-CGGGCEEECCCC
T ss_pred ccEEEEeCCC-CccCcEEEecCC
Confidence 7899999998 889999998754
|
| >d1abrb1 b.42.2.1 (B:1-140) Plant cytotoxin B-chain (lectin) {Abrus precatorius [TaxId: 3816]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Abrus precatorius [TaxId: 3816]
Probab=99.69 E-value=2.4e-17 Score=156.31 Aligned_cols=113 Identities=12% Similarity=0.282 Sum_probs=93.5
Q ss_pred ecCCCceEee-cCCCCCCCceEEecCCCC-CCCccEEEccCCcEEeccCceeeeC----CCCcEEEecCCCCCCC--eEE
Q psy1765 682 LSGTDLCLTS-KVDKTKGSPLVLKKCDEL-SKTQRWSKTDKSELVLAELLCLDAG----ATKPKLTKCHEMGGSQ--EWN 753 (867)
Q Consensus 682 ~~~sg~CLd~-~~~~~~g~~v~l~~C~~~-~~~Q~W~~~~~~~~~~~s~~CLD~~----g~~v~~~~C~~~~~~Q--~W~ 753 (867)
...+|+|||+ +....+|++|++++|++. +.+|+|.++..++++. +++|||+. |+.|++++|++.. +| +|.
T Consensus 19 ~~~sg~CLDv~~~~~~~G~~v~~~~C~g~~~~nq~w~~~~~g~ir~-~g~cld~~~~~~G~~v~~~~C~~~~-~q~~~~~ 96 (140)
T d1abrb1 19 GGRDGMCVDVYDNGYHNGNRIIMWKCKDRLEENQLWTLKSDKTIRS-NGKCLTTYGYAPGSYVMIYDCTSAV-AEATYWE 96 (140)
T ss_dssp ECGGGCEEEEGGGCCSTTCBEEEECCCSSCCGGGCEEECTTSBEEE-TTEEEEESCSSTTCBEEEECTTTSC-GGGSBCE
T ss_pred eCCCCeEEEcCCCCCCCCCEEEEEecCCCCCccEEEEECCCCeEEE-cCccccccCCCCCCEEEEEecCCCC-CcceEEE
Confidence 3468999998 556678999999999874 3569999999998875 47999975 6699999999864 54 455
Q ss_pred EecCCeeeeecCCCCceeecCCCCCCCeEEEEecCCCCCceEEEe
Q psy1765 754 FVLRDKTPIYSPATGTCLGSKNRLENTVIVMEMCAQHKDTSWDLV 798 (867)
Q Consensus 754 ~~~~~~~~i~n~~sg~CLd~~~~~~g~~v~~~~C~~~~~Q~W~~~ 798 (867)
+..++. |+|+.|++|||+.+...|+.|++++|+++++|+|++.
T Consensus 97 ~~~~g~--i~n~~sg~cLd~~~~~~g~~v~~~~c~g~~~Q~W~~~ 139 (140)
T d1abrb1 97 IWDNGT--IINPKSALVLSAESSSMGGTLTVQTNEYLMRQGWRTG 139 (140)
T ss_dssp ECTTSC--EEETTTTEEEECCCSSTTCBCEEECCCCCGGGCCEES
T ss_pred eccCce--EEeceeeeEecccccCCCCEEEEEeCCCCccceeecC
Confidence 655553 8999999999998776799999999999999999974
|
| >d1vcla2 b.42.2.1 (A:151-283) Hemolytic lectin CEL-III, domains 1 and 2 {Cucumaria echinata [TaxId: 40245]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Hemolytic lectin CEL-III, domains 1 and 2 species: Cucumaria echinata [TaxId: 40245]
Probab=99.69 E-value=3.4e-17 Score=153.90 Aligned_cols=122 Identities=16% Similarity=0.278 Sum_probs=94.5
Q ss_pred ceeeeecCCCceecccCCCCCCCcEEEEecCCCCCCceeeecCCCceEE-eeceeeecCC----CccEEEeCCCCCCCcc
Q psy1765 547 HFHIRLSSTDLCLTSKVDKTKGSPLVLKKCDELSKTQHWSKTDKSELVL-AELLCLDAGA----TKPKLTKCHEMGGSQE 621 (867)
Q Consensus 547 ~g~ir~~~~~~CLD~~~~~~~g~~v~l~~C~~~~~~Q~w~~t~~~~i~~-~~~~CLd~~g----~~v~l~~C~~~~~~Q~ 621 (867)
.|.|+|..+++|||+.+. ..|++|++|+|++ ..+|+|.|+.+|.|+. ++++|||+.+ +.+.++.|++. .+|+
T Consensus 5 ~g~I~n~~sg~CLdv~~~-~~g~~v~~~~c~~-~~~Q~w~~~~~g~~~~~~s~~cLd~~~~~~~~~v~~~~c~~~-~~Q~ 81 (133)
T d1vcla2 5 YGRLRNEKSDLCLDVEGS-DGKGNVLMYSCED-NLDQWFRYYENGEIVNAKSGMCLDVEGSDGSGNVGIYRCDDL-RDQM 81 (133)
T ss_dssp EEEEEETTTCCEEEESSS-SSCEEEEEECCCS-CGGGCEEEETTSCEEETTTCCEEEESSSSSCSBEEEECCCCC-GGGC
T ss_pred EEEEEECCCCCEEEeCCC-CCCCeEEEEecCC-CccEEEEEecccceeeccCCceeeeccccCCCeeEEEEeCCC-ccce
Confidence 467788899999999764 5799999999997 4599999999999874 5689999874 45899999974 5676
Q ss_pred eeeeeeeccceeeecccCcccccCCChhhhhhhhhccccCCCCCcccccccc-cccceEEEecCCCceEeecCCCCCCCc
Q psy1765 622 YWCWLRCKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARN-YTSHFHIRLSGTDLCLTSKVDKTKGSP 700 (867)
Q Consensus 622 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~~~-~~~~~~i~~~~sg~CLd~~~~~~~g~~ 700 (867)
| .+. ... -...+.|+|..+++|||+.+ ..+|+.
T Consensus 82 W-~~~--------------------------------------------~~~~~~~~~~i~~~~s~~cLd~~~-~~~g~~ 115 (133)
T d1vcla2 82 W-SRP--------------------------------------------NAYCNGDYCSFLNKESNKCLDVSG-DQGTGD 115 (133)
T ss_dssp E-ECC--------------------------------------------GGGCBTTEECCEETTTCCEEEESS-SSSCSB
T ss_pred E-EEc--------------------------------------------ccccCCccEEEEEcCCCCEEEecC-CCCCce
Confidence 4 321 000 00125788999999999843 346788
Q ss_pred eEEecCCCCCCCccEEEc
Q psy1765 701 LVLKKCDELSKTQRWSKT 718 (867)
Q Consensus 701 v~l~~C~~~~~~Q~W~~~ 718 (867)
|++++|++ +++|+|+|.
T Consensus 116 v~~~~c~~-~~~Q~W~f~ 132 (133)
T d1vcla2 116 VGTWQCDG-LPDQRFKWV 132 (133)
T ss_dssp EEEECCCC-CGGGCEEEE
T ss_pred EEEEcCCC-CHHhCEEEe
Confidence 99999998 789999984
|
| >d1m2tb1 b.42.2.1 (B:249-384) Plant cytotoxin B-chain (lectin) {European mistletoe (Viscum album) [TaxId: 3972]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: European mistletoe (Viscum album) [TaxId: 3972]
Probab=99.68 E-value=5e-17 Score=153.38 Aligned_cols=117 Identities=13% Similarity=0.200 Sum_probs=97.7
Q ss_pred eEEEecCCCceEee-cCCCCCCCceEEecCCCC-CCCccEEEccCCcEEeccCceeeeC----CCCcEEEecCCCC-CCC
Q psy1765 678 FHIRLSGTDLCLTS-KVDKTKGSPLVLKKCDEL-SKTQRWSKTDKSELVLAELLCLDAG----ATKPKLTKCHEMG-GSQ 750 (867)
Q Consensus 678 ~~i~~~~sg~CLd~-~~~~~~g~~v~l~~C~~~-~~~Q~W~~~~~~~~~~~s~~CLD~~----g~~v~~~~C~~~~-~~Q 750 (867)
.+|.. .+|+|||+ +....+|++|+++.|+.. ..+|+|.++..+.++. +++|||+. |+.|.+++|++.. .+|
T Consensus 11 ~~i~~-~~G~ClDv~~~~~~~G~~v~l~~c~~n~~~~Q~w~~~~~g~ir~-~~~cld~~~~~~g~~v~~~~C~~~~~~~q 88 (136)
T d1m2tb1 11 VRIVG-RNGMTVDVRDDDFHDGNQIQLWPSKSNNDPNQLWTIKKDGTIRS-NGSCLTTYGYTAGVYVMIFDCNTAVREAT 88 (136)
T ss_dssp ECEEC-GGGCEEEEGGGCCSTTCBEEEECCCCSCCGGGCEEECTTSCEEE-TTEEEEESCSSTTCBEEEEETTTSCGGGG
T ss_pred EEEeC-CCCeEEEcCCCCCCCCCEEEEEecCCCCCccEEEEEeCCccEEE-CCccccccCCCCCCeEEEEecCCCCCccE
Confidence 55664 46999999 556678999999999753 4579999999998875 47999986 5699999998743 368
Q ss_pred eEEEecCCeeeeecCCCCceeecCCCCCCCeEEEEecCCCCCceEEEe
Q psy1765 751 EWNFVLRDKTPIYSPATGTCLGSKNRLENTVIVMEMCAQHKDTSWDLV 798 (867)
Q Consensus 751 ~W~~~~~~~~~i~n~~sg~CLd~~~~~~g~~v~~~~C~~~~~Q~W~~~ 798 (867)
+|.+..++. |+|..+++|||+.+...|+.|.+++|+++++|+|++.
T Consensus 89 ~w~~~~~g~--i~n~~s~lcLd~~~~~~g~~v~~~~c~~~~~Q~W~i~ 134 (136)
T d1m2tb1 89 IWQIWGNGT--IINPRSNLVLAASSGIKGTTLTVQTLDYTLGQGWLAG 134 (136)
T ss_dssp CCEECTTSC--EEETTTTEEEECSSCSTTCBCEEECCCCCGGGCCEES
T ss_pred EEeEcCCCc--EEeccCCeEeccccCCCCCEEEEEcCCCCccceEEec
Confidence 899987764 8999999999998776789999999999999999985
|
| >d1m2tb2 b.42.2.1 (B:385-510) Plant cytotoxin B-chain (lectin) {European mistletoe (Viscum album) [TaxId: 3972]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: European mistletoe (Viscum album) [TaxId: 3972]
Probab=99.68 E-value=2.4e-17 Score=153.50 Aligned_cols=108 Identities=18% Similarity=0.349 Sum_probs=88.6
Q ss_pred CCceecccCCCCCCCcEEEEecCCCCCCceeeecCCCceEEe--eceeeecCC----CccEEEeCCCCCCCcceeeeeee
Q psy1765 555 TDLCLTSKVDKTKGSPLVLKKCDELSKTQHWSKTDKSELVLA--ELLCLDAGA----TKPKLTKCHEMGGSQEYWCWLRC 628 (867)
Q Consensus 555 ~~~CLD~~~~~~~g~~v~l~~C~~~~~~Q~w~~t~~~~i~~~--~~~CLd~~g----~~v~l~~C~~~~~~Q~~w~~~~~ 628 (867)
.++|||+. |+.|.|++||+...+|+|+|+.+|+|+.. .++|||+.+ +.+.++.|+....+|.| .|
T Consensus 12 ~~lCLda~-----G~~v~l~~C~~~~~~Q~W~l~~~g~ir~~~~~~~CL~~~~~~~g~~v~l~~C~~g~~~Q~W-~~--- 82 (126)
T d1m2tb2 12 RDLCMESA-----GGSVYVETCTAGQENQRWALYGDGSIRPKQLQSQCLTNGRDSISTVINIVSCSAGSSGQRW-VF--- 82 (126)
T ss_dssp GGCEEEEE-----TTEEEEECCCTTCGGGCEEECTTSCEEETTCTTEEEECSSCSTTCBCEEEESTTCCGGGCE-EE---
T ss_pred cccCCccC-----CCeEEEEecCCCCcceEEEEcCCCcEEeccCcceeeeecCCCCCCeEEEEeecCCCccceE-EE---
Confidence 78999974 67899999998888999999999999864 479999764 45899999876666764 32
Q ss_pred ccceeeecccCcccccCCChhhhhhhhhccccCCCCCcccccccccccceEEEecCCCceEeecCCCCCCCceEEecCCC
Q psy1765 629 KSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSGTDLCLTSKVDKTKGSPLVLKKCDE 708 (867)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~~~~~~~~~i~~~~sg~CLd~~~~~~~g~~v~l~~C~~ 708 (867)
..++.|+|..+++|||+.+...+|..|.+++|++
T Consensus 83 ----------------------------------------------~~~g~i~n~~sg~cLDv~g~~~~g~~v~~~~c~g 116 (126)
T d1m2tb2 83 ----------------------------------------------TNEGAILNLKNGLAMDVAQANPSLQRIIIYPATG 116 (126)
T ss_dssp ----------------------------------------------CTTSCEEETTTCCEEEEGGGCGGGCCEEEECCCC
T ss_pred ----------------------------------------------ecCceEEecCCCceEeccCCCCCCCeEEEEcCCC
Confidence 2246799999999999954445678899999998
Q ss_pred CCCCccEEEc
Q psy1765 709 LSKTQRWSKT 718 (867)
Q Consensus 709 ~~~~Q~W~~~ 718 (867)
+++|+|.+.
T Consensus 117 -~~nQ~W~~~ 125 (126)
T d1m2tb2 117 -NPNQMWLPV 125 (126)
T ss_dssp -CGGGCCEEE
T ss_pred -ChhhcEEcC
Confidence 889999875
|
| >d1rzob1 b.42.2.1 (B:2001-2135) Plant cytotoxin B-chain (lectin) {Castor bean (Ricinus communis), Ricin [TaxId: 3988]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Castor bean (Ricinus communis), Ricin [TaxId: 3988]
Probab=99.68 E-value=1.5e-17 Score=156.87 Aligned_cols=116 Identities=17% Similarity=0.279 Sum_probs=93.8
Q ss_pred eEEEecCCCceEee-cCCCCCCCceEEecCCCCC-CCccEEEccCCcEEeccCceeeeCCC------CcEEEecCCCCCC
Q psy1765 678 FHIRLSGTDLCLTS-KVDKTKGSPLVLKKCDELS-KTQRWSKTDKSELVLAELLCLDAGAT------KPKLTKCHEMGGS 749 (867)
Q Consensus 678 ~~i~~~~sg~CLd~-~~~~~~g~~v~l~~C~~~~-~~Q~W~~~~~~~~~~~s~~CLD~~g~------~v~~~~C~~~~~~ 749 (867)
.+|.. .+|+|||+ +....+|++|.+++|+++. .+|+|.++..+.++. +++|||+.++ .|++++|++. .+
T Consensus 11 ~ri~~-~~G~CLDv~g~~~~~G~~v~l~~C~~~~~~~Q~w~~~~~g~i~~-~~~cld~~~~~~~~g~~v~~~~~~~~-~~ 87 (135)
T d1rzob1 11 VRIVG-RNGLCVDVTGEEFFDGNPIQLWPCKSNTDWNQLWTLRKDSTIRS-NGKCLTISKSSPRQQVVIYNCSTATV-GA 87 (135)
T ss_dssp ECCBC-GGGEEEEEGGGCCSTTCBEEEEECCSSCCGGGCEECCTTSBCBB-TTEEEEEECCTTCCEEEEEETTTSCG-GG
T ss_pred EEEEc-CCCeEEEcCCCCCCCCCEEEEEecCCCCCccEEEEECCCCeEEe-cCceeeccCCccCCCeEEEEecCCCC-Cc
Confidence 34443 46999998 4556678999999997643 579999999887764 5899998622 5566667654 58
Q ss_pred CeEEEecCCeeeeecCCCCceeecCCCCCCCeEEEEecCCCCCceEEEe
Q psy1765 750 QEWNFVLRDKTPIYSPATGTCLGSKNRLENTVIVMEMCAQHKDTSWDLV 798 (867)
Q Consensus 750 Q~W~~~~~~~~~i~n~~sg~CLd~~~~~~g~~v~~~~C~~~~~Q~W~~~ 798 (867)
|+|.+..++. |+|+.||+|||+.+...|+.|.++.|+++++|+|.|+
T Consensus 88 Q~W~~~~~~~--i~~~~sg~cLd~~~~~~g~~v~~~~c~~~~~Q~W~~~ 134 (135)
T d1rzob1 88 TRWQIWDNRT--IINPRSGLVLAATSGNSGTKLTVQTNIYAVSQGWLPT 134 (135)
T ss_dssp TBCEECTTSB--EEETTTTEEEECSCSSTTCBCEEEECCCCGGGBCBCC
T ss_pred eeEEEcCCCE--EEeCCCCeEEeecCCCCCCEEEEEcCCCCcccEeecc
Confidence 9999987764 8999999999998877799999999999999999885
|
| >d1abrb1 b.42.2.1 (B:1-140) Plant cytotoxin B-chain (lectin) {Abrus precatorius [TaxId: 3816]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Abrus precatorius [TaxId: 3816]
Probab=99.66 E-value=1.3e-16 Score=151.11 Aligned_cols=118 Identities=16% Similarity=0.343 Sum_probs=93.8
Q ss_pred eeeec-CCCceecccCC-CCCCCcEEEEecCCC-CCCceeeecCCCceEEeeceeeecC----CCccEEEeCCCCCCCcc
Q psy1765 549 HIRLS-STDLCLTSKVD-KTKGSPLVLKKCDEL-SKTQHWSKTDKSELVLAELLCLDAG----ATKPKLTKCHEMGGSQE 621 (867)
Q Consensus 549 ~ir~~-~~~~CLD~~~~-~~~g~~v~l~~C~~~-~~~Q~w~~t~~~~i~~~~~~CLd~~----g~~v~l~~C~~~~~~Q~ 621 (867)
++|+. .+++|||+.++ ..+|++|.+|+||+. ..+|+|.++.+|+|+. .++|||+. |+.+.++.|++..++|.
T Consensus 15 ~~~i~~~sg~CLDv~~~~~~~G~~v~~~~C~g~~~~nq~w~~~~~g~ir~-~g~cld~~~~~~G~~v~~~~C~~~~~q~~ 93 (140)
T d1abrb1 15 TVRIGGRDGMCVDVYDNGYHNGNRIIMWKCKDRLEENQLWTLKSDKTIRS-NGKCLTTYGYAPGSYVMIYDCTSAVAEAT 93 (140)
T ss_dssp EECEECGGGCEEEEGGGCCSTTCBEEEECCCSSCCGGGCEEECTTSBEEE-TTEEEEESCSSTTCBEEEECTTTSCGGGS
T ss_pred cEEEeCCCCeEEEcCCCCCCCCCEEEEEecCCCCCccEEEEECCCCeEEE-cCccccccCCCCCCEEEEEecCCCCCcce
Confidence 34433 48999998874 457999999999976 4579999999999985 47999986 35689999998776654
Q ss_pred eeeeeeeccceeeecccCcccccCCChhhhhhhhhccccCCCCCcccccccccccceEEEecCCCceEeecCCCCCCCce
Q psy1765 622 YWCWLRCKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSGTDLCLTSKVDKTKGSPL 701 (867)
Q Consensus 622 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~~~~~~~~~i~~~~sg~CLd~~~~~~~g~~v 701 (867)
+|.+ ..++.|+|..+++|||+.+ ..+|+.|
T Consensus 94 ~~~~-------------------------------------------------~~~g~i~n~~sg~cLd~~~-~~~g~~v 123 (140)
T d1abrb1 94 YWEI-------------------------------------------------WDNGTIINPKSALVLSAES-SSMGGTL 123 (140)
T ss_dssp BCEE-------------------------------------------------CTTSCEEETTTTEEEECCC-SSTTCBC
T ss_pred EEEe-------------------------------------------------ccCceEEeceeeeEecccc-cCCCCEE
Confidence 4432 2246899999999999843 4578899
Q ss_pred EEecCCCCCCCccEEEc
Q psy1765 702 VLKKCDELSKTQRWSKT 718 (867)
Q Consensus 702 ~l~~C~~~~~~Q~W~~~ 718 (867)
++++|++ +.+|+|++.
T Consensus 124 ~~~~c~g-~~~Q~W~~~ 139 (140)
T d1abrb1 124 TVQTNEY-LMRQGWRTG 139 (140)
T ss_dssp EEECCCC-CGGGCCEES
T ss_pred EEEeCCC-CccceeecC
Confidence 9999998 789999975
|
| >d2aaib2 b.42.2.1 (B:136-262) Plant cytotoxin B-chain (lectin) {Castor bean (Ricinus communis), Ricin [TaxId: 3988]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Castor bean (Ricinus communis), Ricin [TaxId: 3988]
Probab=99.65 E-value=7e-17 Score=150.50 Aligned_cols=109 Identities=17% Similarity=0.288 Sum_probs=88.6
Q ss_pred cCCCceecccCCCCCCCcEEEEecCCCCCCceeeecCCCceEEe--eceeeecC----CCccEEEeCCCCCCCcceeeee
Q psy1765 553 SSTDLCLTSKVDKTKGSPLVLKKCDELSKTQHWSKTDKSELVLA--ELLCLDAG----ATKPKLTKCHEMGGSQEYWCWL 626 (867)
Q Consensus 553 ~~~~~CLD~~~~~~~g~~v~l~~C~~~~~~Q~w~~t~~~~i~~~--~~~CLd~~----g~~v~l~~C~~~~~~Q~~w~~~ 626 (867)
..+++|||+. |++|+|++||+...+|+|+|+.+|+|+.+ .++|||+. ++.+.++.|+...++|.| .|
T Consensus 11 g~s~lCLd~~-----G~~v~l~~C~~~~~nQ~W~~~~~g~ir~~~~~~~CL~~~~~~~g~~v~~~~C~~~~~~q~W-~~- 83 (127)
T d2aaib2 11 GLYGLCLQAN-----SGQVWIEDCSSEKAEQQWALYADGSIRPQQNRDNCLTSDSNIRETVVKILSCGPASSGQRW-MF- 83 (127)
T ss_dssp CGGGCEEEEE-----TTEEEEECCCTTSSCCCEEECTTSCEEETTSTTEEEEECCSSCSSCEEEEESTTCCTTSCC-EE-
T ss_pred ecCCcCCccC-----CCeEEEEecCCCCcceEEEECCCCcEEEcccccccccccccCCCccEEEEecCCCCCccee-EE-
Confidence 3489999964 67899999999888999999999999864 47999986 346899999977776653 33
Q ss_pred eeccceeeecccCcccccCCChhhhhhhhhccccCCCCCcccccccccccceEEEecCCCceEeecCCCCCCCceEEecC
Q psy1765 627 RCKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSGTDLCLTSKVDKTKGSPLVLKKC 706 (867)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~~~~~~~~~i~~~~sg~CLd~~~~~~~g~~v~l~~C 706 (867)
...+.|+|..+++|||+.++..+|+.|.+++|
T Consensus 84 ------------------------------------------------~~~g~i~~~~sg~CLdv~g~~~~g~~v~~~~C 115 (127)
T d2aaib2 84 ------------------------------------------------KNDGTILNLYSGLVLDVRASDPSLKQIILYPL 115 (127)
T ss_dssp ------------------------------------------------CTTSCEECTTTCCEEEEGGGCGGGCCEEEECC
T ss_pred ------------------------------------------------ecCceEEeeccCceEEecCCCCCCCEEEEEeC
Confidence 12367899999999999544556789999999
Q ss_pred CCCCCCccEEE
Q psy1765 707 DELSKTQRWSK 717 (867)
Q Consensus 707 ~~~~~~Q~W~~ 717 (867)
++ +++|+|..
T Consensus 116 ~g-~~~Q~W~~ 125 (127)
T d2aaib2 116 HG-DPNQIWLP 125 (127)
T ss_dssp CC-CGGGCCEE
T ss_pred CC-CccceeEE
Confidence 98 78999963
|
| >d2zqna1 b.42.2.1 (A:131-260) 29-kDa galactose-binding lectin {Lumbricus terrestris [TaxId: 6398]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: 29-kDa galactose-binding lectin species: Lumbricus terrestris [TaxId: 6398]
Probab=99.65 E-value=2e-16 Score=147.96 Aligned_cols=120 Identities=16% Similarity=0.180 Sum_probs=96.0
Q ss_pred eeeecCCCceecccCCC-CCCCcEEEEecCCC--CCCceeeecCCCceEE-eeceeeecCCCccEEEeCCCCCCCcceee
Q psy1765 549 HIRLSSTDLCLTSKVDK-TKGSPLVLKKCDEL--SKTQHWSKTDKSELVL-AELLCLDAGATKPKLTKCHEMGGSQEYWC 624 (867)
Q Consensus 549 ~ir~~~~~~CLD~~~~~-~~g~~v~l~~C~~~--~~~Q~w~~t~~~~i~~-~~~~CLd~~g~~v~l~~C~~~~~~Q~~w~ 624 (867)
.|++..+++|||+.++. .+|++|.+|+|+.. ..+|+|.++..++|+. ..++|||+.|+.+.+++|++. .+|+||.
T Consensus 5 ~I~~~~sg~~LDv~g~~~~~Ga~v~~w~~~~~~g~~nQ~W~~~~~g~i~~~~~~~~ld~~G~~v~~~~c~~~-~~qqW~~ 83 (130)
T d2zqna1 5 YIKSELNGKVLDIEGQNPAPGSKIITWDQKKGPTAVNQLWYTDQQGVIRSKLNDFAIDASHEQIETQPFDPN-NPKRAWI 83 (130)
T ss_dssp EEEETTTSCEEEEGGGCCSTTCBEEEECCCCSGGGGGGCEEECTTSCEEETTTCCEEECSSSSCEEECCCTT-CGGGCEE
T ss_pred EEEECCCCCEEEeCCCCCCCCceEEEEEecCCCCCcceEEEEeccCCEEEccccccccccCcceEEeccCCC-cccEEEE
Confidence 67888999999988754 57999999999754 3489999999999984 568999999999999999985 4556642
Q ss_pred eeeeccceeeecccCcccccCCChhhhhhhhhccccCCCCCcccccccccccceEEEecCCCceEee-cCCCCCCCceEE
Q psy1765 625 WLRCKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSGTDLCLTS-KVDKTKGSPLVL 703 (867)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~~~~~~~~~i~~~~sg~CLd~-~~~~~~g~~v~l 703 (867)
.. ....+.+..+++|||+ +++..+|+.|++
T Consensus 84 ~~-------------------------------------------------~g~~~~~~~~~~~LDv~~~~~~~G~~v~~ 114 (130)
T d2zqna1 84 VS-------------------------------------------------GNTIAQLSDRDIVLDIIKSDKEAGAHICA 114 (130)
T ss_dssp EE-------------------------------------------------TTEEEETTEEEEEEEEGGGCCSTTCBEEE
T ss_pred cC-------------------------------------------------CCeEEEeccCCeEEECCCCCCCCCCEEEE
Confidence 10 0123344568999999 556778999999
Q ss_pred ecCCCCCCCccEEEcc
Q psy1765 704 KKCDELSKTQRWSKTD 719 (867)
Q Consensus 704 ~~C~~~~~~Q~W~~~~ 719 (867)
++|++ +++|+|.+..
T Consensus 115 ~~~~g-~~nQ~W~l~~ 129 (130)
T d2zqna1 115 WKQHG-GPNQKFIIES 129 (130)
T ss_dssp EECCC-CGGGCEEEEE
T ss_pred EcCCC-CccceEEEee
Confidence 99998 8999999864
|
| >d1abrb2 b.42.2.1 (B:141-267) Plant cytotoxin B-chain (lectin) {Abrus precatorius [TaxId: 3816]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Abrus precatorius [TaxId: 3816]
Probab=99.65 E-value=9.1e-17 Score=149.70 Aligned_cols=108 Identities=20% Similarity=0.328 Sum_probs=89.1
Q ss_pred CCCceecccCCCCCCCcEEEEecCCCCCCceeeecCCCceEE--eeceeeecCC----CccEEEeCCCCCCCcceeeeee
Q psy1765 554 STDLCLTSKVDKTKGSPLVLKKCDELSKTQHWSKTDKSELVL--AELLCLDAGA----TKPKLTKCHEMGGSQEYWCWLR 627 (867)
Q Consensus 554 ~~~~CLD~~~~~~~g~~v~l~~C~~~~~~Q~w~~t~~~~i~~--~~~~CLd~~g----~~v~l~~C~~~~~~Q~~w~~~~ 627 (867)
.+++|||+. |++|.+|+||+...+|+|.++.+|+|+. ..++|||+.+ +.+.++.|+....+|.| .|
T Consensus 12 ~s~lCld~~-----G~~v~l~~C~~~~~nQ~w~~~~~g~i~~~~~~~~CLd~~~~~~g~~v~l~~c~~~~~~q~W-~~-- 83 (127)
T d1abrb2 12 YSDLCMQAQ-----GSNVWMADCDSNKKEQQWALYTDGSIRSVQNTNNCLTSKDHKQGSTILLMGCSNGWASQRW-VF-- 83 (127)
T ss_dssp GGGCEEEEE-----TTEEEEECCCTTCGGGCEEECTTSCEEETTEEEEEEEESSSSTTCBEEEEESTTCCGGGCC-EE--
T ss_pred cCCcCCccC-----CceEEEEeCCCCCceEEEEecCCceEEEcCCccEEEeecccCCCceEEEEeccCCCCceEE-EE--
Confidence 489999974 6789999999988899999999999985 4579999863 45889999987777754 32
Q ss_pred eccceeeecccCcccccCCChhhhhhhhhccccCCCCCcccccccccccceEEEecCCCceEeecCCCCCCCceEEecCC
Q psy1765 628 CKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSGTDLCLTSKVDKTKGSPLVLKKCD 707 (867)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~~~~~~~~~i~~~~sg~CLd~~~~~~~g~~v~l~~C~ 707 (867)
...+.|+|..+++|||+.+...+|+.|.+++|+
T Consensus 84 -----------------------------------------------~~~g~i~~~~s~~CLdv~g~~~~g~~v~~~~C~ 116 (127)
T d1abrb2 84 -----------------------------------------------KNDGSIYSLYDDMVMDVKGSDPSLKQIILWPYT 116 (127)
T ss_dssp -----------------------------------------------CTTSCEEETTTTEEEEEGGGCGGGCCEEEECCC
T ss_pred -----------------------------------------------eeceEEEecCCCceEEcccCCCCCCEEEEEcCC
Confidence 223679999999999995555678899999999
Q ss_pred CCCCCccEEE
Q psy1765 708 ELSKTQRWSK 717 (867)
Q Consensus 708 ~~~~~Q~W~~ 717 (867)
+ +.+|+|..
T Consensus 117 g-~~nQ~W~~ 125 (127)
T d1abrb2 117 G-KPNQIWLT 125 (127)
T ss_dssp C-CGGGCCEE
T ss_pred C-CccceeEE
Confidence 8 89999985
|
| >d1hwmb2 b.42.2.1 (B:136-266) Plant cytotoxin B-chain (lectin) {Sambucus ebulus, ebulin [TaxId: 28503]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Sambucus ebulus, ebulin [TaxId: 28503]
Probab=99.64 E-value=3.1e-16 Score=146.89 Aligned_cols=112 Identities=15% Similarity=0.339 Sum_probs=90.4
Q ss_pred cCCCceecccCCCCCCCcEEEEecCCCCCCceeeecCCCceEE--eeceeeecCC----CccEEEeCCCCCCCcceeeee
Q psy1765 553 SSTDLCLTSKVDKTKGSPLVLKKCDELSKTQHWSKTDKSELVL--AELLCLDAGA----TKPKLTKCHEMGGSQEYWCWL 626 (867)
Q Consensus 553 ~~~~~CLD~~~~~~~g~~v~l~~C~~~~~~Q~w~~t~~~~i~~--~~~~CLd~~g----~~v~l~~C~~~~~~Q~~w~~~ 626 (867)
..+++|||+.+ .+++|.|++||+...+|+|+|+.+|.|+. ..++||+..+ +.|.+++|++. .+|.| .|
T Consensus 11 g~~~lCLd~~g---~~~~v~l~~C~~~~~~Q~W~l~~~g~i~~~~~~~lCl~~~~~~~g~~v~l~~C~~~-~~q~W-~~- 84 (131)
T d1hwmb2 11 GYNEMCLQANG---ENNNVWMEDCDVTSVQQQWALFDDRTIRVNNSRGLCVTSNGYVSKDLIVIRKCQGL-ATQRW-FF- 84 (131)
T ss_dssp ETTTEEEEEET---TTTEEEEEECCTTCGGGCEEECTTSCEEETTEEEEEEEESCSSTTEEEEEEECCCC-GGGCC-EE-
T ss_pred eeCCcCCCcCC---CCceEEEEecCCCChheEEEEcCCCcEEeccCcceEEeccccCCCCEEEEEEcCCC-cceEE-EE-
Confidence 45899999875 46789999999988899999999999985 4579999774 45899999974 44543 22
Q ss_pred eeccceeeecccCcccccCCChhhhhhhhhccccCCCCCcccccccccccceEEEecCCCceEeecCCCCCCCceEEecC
Q psy1765 627 RCKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSGTDLCLTSKVDKTKGSPLVLKKC 706 (867)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~~~~~~~~~i~~~~sg~CLd~~~~~~~g~~v~l~~C 706 (867)
...+.|+|..+++|||+.+....|..|++++|
T Consensus 85 ------------------------------------------------~~~g~i~~~~s~~CLdv~g~~~~g~~v~~~~C 116 (131)
T d1hwmb2 85 ------------------------------------------------NSDGSVVNLKSTRVMDVKESDVSLQEVIIFPA 116 (131)
T ss_dssp ------------------------------------------------CTTSCEEETTTTEEEEECTTCSSSCBEEEECC
T ss_pred ------------------------------------------------eCCCeEEeccCCeEEEecCCCCCCCEEEEECC
Confidence 12367899999999999555567789999999
Q ss_pred CCCCCCccEEEcc
Q psy1765 707 DELSKTQRWSKTD 719 (867)
Q Consensus 707 ~~~~~~Q~W~~~~ 719 (867)
++ +++|+|.+..
T Consensus 117 ~~-~~~Q~W~~~~ 128 (131)
T d1hwmb2 117 TG-NPNQQWRTQV 128 (131)
T ss_dssp CC-CGGGCEEEEC
T ss_pred CC-CcccceEeeC
Confidence 98 8899999864
|
| >d1ggpb2 b.42.2.1 (B:141-267) Plant cytotoxin B-chain (lectin) {Mongolian snake-gourd (Trichosanthes kirilowii), Lectin 1 [TaxId: 3677]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Mongolian snake-gourd (Trichosanthes kirilowii), Lectin 1 [TaxId: 3677]
Probab=99.63 E-value=2.5e-16 Score=146.92 Aligned_cols=111 Identities=19% Similarity=0.248 Sum_probs=86.9
Q ss_pred ecCCCceecccCCCCCCCcEEEEecCCCCCCceeeecCCCceEE--eeceeeecCC----CccEEEeCCCCCCCcceeee
Q psy1765 552 LSSTDLCLTSKVDKTKGSPLVLKKCDELSKTQHWSKTDKSELVL--AELLCLDAGA----TKPKLTKCHEMGGSQEYWCW 625 (867)
Q Consensus 552 ~~~~~~CLD~~~~~~~g~~v~l~~C~~~~~~Q~w~~t~~~~i~~--~~~~CLd~~g----~~v~l~~C~~~~~~Q~~w~~ 625 (867)
...+++|||+.+ .+.+|.|++|++...+|+|+|+.+|+|+. +.++|||+.+ ..|.++.|++. .+|.
T Consensus 10 ~g~~~lCLd~~~---~~~~v~l~~C~~~~~nQ~W~~~~dg~ir~~~~~~~CL~~~~~~~g~~V~~~~C~~~-~~Q~---- 81 (128)
T d1ggpb2 10 SGSAQLCMQAGN---GPANLWMSECRAGKAEQQWALLTDKSIRSETNSDNCLTSAADAGPKTILLALCSGP-ASQR---- 81 (128)
T ss_dssp ECGGGCEECC-T---TT-BCCEECCCSSCTTSEEEEETTTEEEESSCTTEEECCCCCSSCCCCBEEECCCC-TTSC----
T ss_pred EeeCCcCEecCC---CCceEEEEeCCCCCcceEEEEcCCCCEEEcccCceeEeecccCCCCeEEEEecCCC-cceE----
Confidence 345899999865 35679999999888899999999999985 3579999863 45789999874 3444
Q ss_pred eeeccceeeecccCcccccCCChhhhhhhhhccccCCCCCcccccccccccceEEEecCCCceEeecCCCCCCCceEEec
Q psy1765 626 LRCKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSGTDLCLTSKVDKTKGSPLVLKK 705 (867)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~~~~~~~~~i~~~~sg~CLd~~~~~~~g~~v~l~~ 705 (867)
|.+. .++.|+|..+++|||+.+...++..|.+++
T Consensus 82 -----------------------------------------W~~~-----~~g~i~n~~sg~CLDv~g~~~~g~~v~~~~ 115 (128)
T d1ggpb2 82 -----------------------------------------WVFD-----DDGSILSLYDDKQMDSEGAAAAAKQIILWW 115 (128)
T ss_dssp -----------------------------------------CEEC-----TTSSEEETTTTEEEEESSSCCSSSCEEEEC
T ss_pred -----------------------------------------EEEe-----CCCcEEEeeCCceEecccCCCCCCEEEEEc
Confidence 3332 236799999999999965556788999999
Q ss_pred CCCCCCCccEEE
Q psy1765 706 CDELSKTQRWSK 717 (867)
Q Consensus 706 C~~~~~~Q~W~~ 717 (867)
|++ +++|+|..
T Consensus 116 c~g-~~nQ~W~~ 126 (128)
T d1ggpb2 116 NAA-EPNQIWLA 126 (128)
T ss_dssp CCC-CGGGCCEE
T ss_pred CCC-ChhcEEEe
Confidence 998 89999974
|
| >d2ihoa1 b.42.2.1 (A:2-155) Agglutinin MOA, N-terminal domain {Fairy-ring mushroom (Marasmius oreades) [TaxId: 181124]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Agglutinin MOA, N-terminal domain species: Fairy-ring mushroom (Marasmius oreades) [TaxId: 181124]
Probab=99.60 E-value=1.2e-15 Score=146.74 Aligned_cols=122 Identities=15% Similarity=0.107 Sum_probs=96.5
Q ss_pred ceEEEecCCCceEee-cCCCCCCCceEEecCCCCC--CCccEEEccCC----cEE---eccCceeeeC------CCCcEE
Q psy1765 677 HFHIRLSGTDLCLTS-KVDKTKGSPLVLKKCDELS--KTQRWSKTDKS----ELV---LAELLCLDAG------ATKPKL 740 (867)
Q Consensus 677 ~~~i~~~~sg~CLd~-~~~~~~g~~v~l~~C~~~~--~~Q~W~~~~~~----~~~---~~s~~CLD~~------g~~v~~ 740 (867)
.+.|++..+++|||+ .....+|++|++++|++.. .+|+|.|+..+ .+. ..+++|||+. |+.|++
T Consensus 6 ~Y~I~n~~s~~~ldv~~~~~~~G~~v~~w~~~~~~~~~nQ~W~~~~~~~~~~~y~i~n~~s~~~l~~~~~~~~~g~~v~~ 85 (154)
T d2ihoa1 6 IYHIENAGVPSAIDLKDGSSSDGTPIVGWQFTPDTINWHQLWLAEPIPNVADTFTLCNLFSGTYMDLYNGSSEAGTAVNG 85 (154)
T ss_dssp EEEEEESSSSCEEEEGGGCCSTTEEEEEECCCTTSCCTTCEEEEEECTTSTTEEEEEETTTCCEEEEGGGCCSTTEEEEE
T ss_pred EEEEEECCCCCEEEeCCCCCCCCCEEEEEecCCCCCCcceEEEEEecCCcCceEEEEEcCCCeEEeccCCcCCCCcEEEE
Confidence 368999999999999 5567789999999998743 48999997533 222 3479999965 558999
Q ss_pred EecCC--CCCCCeEEEecCC---eeeeecCCCCceeecCCCCC--CCeEEEEec---CCCCCceEEEe
Q psy1765 741 TKCHE--MGGSQEWNFVLRD---KTPIYSPATGTCLGSKNRLE--NTVIVMEMC---AQHKDTSWDLV 798 (867)
Q Consensus 741 ~~C~~--~~~~Q~W~~~~~~---~~~i~n~~sg~CLd~~~~~~--g~~v~~~~C---~~~~~Q~W~~~ 798 (867)
|.|++ ..++|+|.+...+ .++|.+..+++|||+.+..+ |+.|++|+| +++++|+|.|+
T Consensus 86 ~~~~~~~~~~~Q~W~~~~~~~g~~y~i~n~~sg~~Ldv~~~~~~~gt~i~~w~~~~~~g~~~Q~W~f~ 153 (154)
T d2ihoa1 86 WQGTAFTTNPHQLWTIKKSSDGTSYKIQNYGSKTFVDLVNGDSSDGAKIAGWTGTWDEGNPHQKWYFN 153 (154)
T ss_dssp ECCCTTCCCGGGCEEEEECTTSSSEEEEETTTCCEEEEGGGCCSTTEEEEEECCCSSCCCGGGCEEEE
T ss_pred EeecccCCCcccEEEEccCCCcceEEEEEcCCCcEEEcCCCCcCCCcEEEEEecccCCCCccceEEEe
Confidence 99865 2458999997543 35699999999999975444 899999998 46778999996
|
| >d1hwmb1 b.42.2.1 (B:3-135) Plant cytotoxin B-chain (lectin) {Sambucus ebulus, ebulin [TaxId: 28503]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Sambucus ebulus, ebulin [TaxId: 28503]
Probab=99.60 E-value=1.4e-15 Score=142.64 Aligned_cols=113 Identities=19% Similarity=0.350 Sum_probs=90.2
Q ss_pred cCCCceecccCCC-CCCCcEEEEecCCCCCCceeeecCCCceEEeeceeeecC----CCccEEEeCCCCCCCcceeeeee
Q psy1765 553 SSTDLCLTSKVDK-TKGSPLVLKKCDELSKTQHWSKTDKSELVLAELLCLDAG----ATKPKLTKCHEMGGSQEYWCWLR 627 (867)
Q Consensus 553 ~~~~~CLD~~~~~-~~g~~v~l~~C~~~~~~Q~w~~t~~~~i~~~~~~CLd~~----g~~v~l~~C~~~~~~Q~~w~~~~ 627 (867)
..+|+|||+.++. ..|++|.+|+||+. .+|+|.|+.+|.++. .++|||.. ++.+.++.|++....+.+|.+
T Consensus 15 ~~sG~CLDv~g~~~~~g~~v~~~~C~g~-~~Q~w~~~~~g~~~~-~~~~l~~~~~~~g~~v~~~~c~~~~~~~q~w~~-- 90 (133)
T d1hwmb1 15 GRDGLCVDVRNGYDTDGTPIQLWPCGTQ-RNQQWTFYNDKTIRS-MGKCMTANGLNSGSYIMITDCSTAAEDATKWEV-- 90 (133)
T ss_dssp CGGGCEEEEGGGCCSTTCBEEEECCCCC-GGGCEEECTTSCEEE-TTEEEEESSSSTTCBEEEECTTTSCTTSSCCEE--
T ss_pred ccCCcEEECCCCCCCCCCEEEEEccCCC-ccccEEEecCccEEE-eeeecccCCCCCCCeeEEEecCCCCCceeEEEE--
Confidence 3589999998754 57999999999974 699999999999875 56999986 456899999976554333432
Q ss_pred eccceeeecccCcccccCCChhhhhhhhhccccCCCCCcccccccccccceEEEecCCCceEeecCCCCCCCceEEecCC
Q psy1765 628 CKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSGTDLCLTSKVDKTKGSPLVLKKCD 707 (867)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~~~~~~~~~i~~~~sg~CLd~~~~~~~g~~v~l~~C~ 707 (867)
. ..+.|+|..+++|||+.+ ..+|+.|.+++|+
T Consensus 91 ------------------------------------------~-----~~g~i~~~~sg~cLd~~~-~~~g~~v~~~~c~ 122 (133)
T d1hwmb1 91 ------------------------------------------L-----IDGSIINPSSGLVMTAPS-GASRTTLLLENNI 122 (133)
T ss_dssp ------------------------------------------E-----TTTEEECTTTCCEEECSC-SSTTCBCEEECCC
T ss_pred ------------------------------------------c-----CCCCEEccCCCeEeeccc-CCCCCEEEEEcCC
Confidence 1 236799999999999843 4578899999999
Q ss_pred CCCCCccEEEc
Q psy1765 708 ELSKTQRWSKT 718 (867)
Q Consensus 708 ~~~~~Q~W~~~ 718 (867)
+ +.+|+|+++
T Consensus 123 g-~~~Q~W~~~ 132 (133)
T d1hwmb1 123 H-AASQGWTVS 132 (133)
T ss_dssp C-CGGGCCEEE
T ss_pred C-CcccceeCC
Confidence 8 789999986
|
| >d1m2tb1 b.42.2.1 (B:249-384) Plant cytotoxin B-chain (lectin) {European mistletoe (Viscum album) [TaxId: 3972]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: European mistletoe (Viscum album) [TaxId: 3972]
Probab=99.58 E-value=2.9e-15 Score=141.01 Aligned_cols=113 Identities=16% Similarity=0.233 Sum_probs=89.3
Q ss_pred CCceecccCC-CCCCCcEEEEecCCC-CCCceeeecCCCceEEeeceeeecCC----CccEEEeCCCCCCCcceeeeeee
Q psy1765 555 TDLCLTSKVD-KTKGSPLVLKKCDEL-SKTQHWSKTDKSELVLAELLCLDAGA----TKPKLTKCHEMGGSQEYWCWLRC 628 (867)
Q Consensus 555 ~~~CLD~~~~-~~~g~~v~l~~C~~~-~~~Q~w~~t~~~~i~~~~~~CLd~~g----~~v~l~~C~~~~~~Q~~w~~~~~ 628 (867)
+|+|||+.++ ..+|++|.||+|+.. ..+|+|+++.+|.|+. .++|||+.+ +.+.+++|++...++.
T Consensus 17 ~G~ClDv~~~~~~~G~~v~l~~c~~n~~~~Q~w~~~~~g~ir~-~~~cld~~~~~~g~~v~~~~C~~~~~~~q------- 88 (136)
T d1m2tb1 17 NGMTVDVRDDDFHDGNQIQLWPSKSNNDPNQLWTIKKDGTIRS-NGSCLTTYGYTAGVYVMIFDCNTAVREAT------- 88 (136)
T ss_dssp GGCEEEEGGGCCSTTCBEEEECCCCSCCGGGCEEECTTSCEEE-TTEEEEESCSSTTCBEEEEETTTSCGGGG-------
T ss_pred CCeEEEcCCCCCCCCCEEEEEecCCCCCccEEEEEeCCccEEE-CCccccccCCCCCCeEEEEecCCCCCccE-------
Confidence 7999999875 457999999999854 4589999999999985 569999873 5689999997544322
Q ss_pred ccceeeecccCcccccCCChhhhhhhhhccccCCCCCcccccccccccceEEEecCCCceEeecCCCCCCCceEEecCCC
Q psy1765 629 KSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSGTDLCLTSKVDKTKGSPLVLKKCDE 708 (867)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~~~~~~~~~i~~~~sg~CLd~~~~~~~g~~v~l~~C~~ 708 (867)
+|.+ ..++.|+|..+++|||+.+ ..+|+.|.+++|++
T Consensus 89 -------------------------------------~w~~-----~~~g~i~n~~s~lcLd~~~-~~~g~~v~~~~c~~ 125 (136)
T d1m2tb1 89 -------------------------------------IWQI-----WGNGTIINPRSNLVLAASS-GIKGTTLTVQTLDY 125 (136)
T ss_dssp -------------------------------------CCEE-----CTTSCEEETTTTEEEECSS-CSTTCBCEEECCCC
T ss_pred -------------------------------------EEeE-----cCCCcEEeccCCeEecccc-CCCCCEEEEEcCCC
Confidence 2322 2246799999999999843 45688999999998
Q ss_pred CCCCccEEEcc
Q psy1765 709 LSKTQRWSKTD 719 (867)
Q Consensus 709 ~~~~Q~W~~~~ 719 (867)
+.+|+|+++.
T Consensus 126 -~~~Q~W~i~n 135 (136)
T d1m2tb1 126 -TLGQGWLAGN 135 (136)
T ss_dssp -CGGGCCEESS
T ss_pred -CccceEEecC
Confidence 7899999875
|
| >d1rzob1 b.42.2.1 (B:2001-2135) Plant cytotoxin B-chain (lectin) {Castor bean (Ricinus communis), Ricin [TaxId: 3988]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Plant cytotoxin B-chain (lectin) species: Castor bean (Ricinus communis), Ricin [TaxId: 3988]
Probab=99.55 E-value=2.9e-15 Score=140.85 Aligned_cols=111 Identities=20% Similarity=0.361 Sum_probs=84.6
Q ss_pred CCceecccCCC-CCCCcEEEEecCCCC-CCceeeecCCCceEEeeceeeecCCC----ccEEEeCCCC-CCCcceeeeee
Q psy1765 555 TDLCLTSKVDK-TKGSPLVLKKCDELS-KTQHWSKTDKSELVLAELLCLDAGAT----KPKLTKCHEM-GGSQEYWCWLR 627 (867)
Q Consensus 555 ~~~CLD~~~~~-~~g~~v~l~~C~~~~-~~Q~w~~t~~~~i~~~~~~CLd~~g~----~v~l~~C~~~-~~~Q~~w~~~~ 627 (867)
+|+|||+.++. ..|++|.||+|++.. .+|+|+++.+|.|+. .++|||..+. .+.+..|+.. ..+|.
T Consensus 17 ~G~CLDv~g~~~~~G~~v~l~~C~~~~~~~Q~w~~~~~g~i~~-~~~cld~~~~~~~~g~~v~~~~~~~~~~Q~------ 89 (135)
T d1rzob1 17 NGLCVDVTGEEFFDGNPIQLWPCKSNTDWNQLWTLRKDSTIRS-NGKCLTISKSSPRQQVVIYNCSTATVGATR------ 89 (135)
T ss_dssp GGEEEEEGGGCCSTTCBEEEEECCSSCCGGGCEECCTTSBCBB-TTEEEEEECCTTCCEEEEEETTTSCGGGTB------
T ss_pred CCeEEEcCCCCCCCCCEEEEEecCCCCCccEEEEECCCCeEEe-cCceeeccCCccCCCeEEEEecCCCCCcee------
Confidence 78999998754 479999999999754 689999999999875 5799998632 3455555432 33444
Q ss_pred eccceeeecccCcccccCCChhhhhhhhhccccCCCCCcccccccccccceEEEecCCCceEeecCCCCCCCceEEecCC
Q psy1765 628 CKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSGTDLCLTSKVDKTKGSPLVLKKCD 707 (867)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~~~~~~~~~i~~~~sg~CLd~~~~~~~g~~v~l~~C~ 707 (867)
|.+. ..+.|+|..+++|||+.+ ...|+.|+++.|+
T Consensus 90 ---------------------------------------W~~~-----~~~~i~~~~sg~cLd~~~-~~~g~~v~~~~c~ 124 (135)
T d1rzob1 90 ---------------------------------------WQIW-----DNRTIINPRSGLVLAATS-GNSGTKLTVQTNI 124 (135)
T ss_dssp ---------------------------------------CEEC-----TTSBEEETTTTEEEECSC-SSTTCBCEEEECC
T ss_pred ---------------------------------------EEEc-----CCCEEEeCCCCeEEeecC-CCCCCEEEEEcCC
Confidence 3332 246799999999999843 3568899999999
Q ss_pred CCCCCccEEEc
Q psy1765 708 ELSKTQRWSKT 718 (867)
Q Consensus 708 ~~~~~Q~W~~~ 718 (867)
+ +.+|+|+++
T Consensus 125 ~-~~~Q~W~~~ 134 (135)
T d1rzob1 125 Y-AVSQGWLPT 134 (135)
T ss_dssp C-CGGGBCBCC
T ss_pred C-CcccEeecc
Confidence 8 789999986
|
| >d1qxma2 b.42.2.1 (A:149-286) Hemagglutinin component Ha1 {Clostridium botulinum D phage [TaxId: 29342]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Hemagglutinin component Ha1 species: Clostridium botulinum D phage [TaxId: 29342]
Probab=99.52 E-value=2.3e-14 Score=135.17 Aligned_cols=118 Identities=15% Similarity=0.168 Sum_probs=93.1
Q ss_pred eEEEe-cCCCceEeecCCCCCCCceEEecCCCCCCCccEEEccCCc---EE---eccCceeeeC---CCCcEEEecCCCC
Q psy1765 678 FHIRL-SGTDLCLTSKVDKTKGSPLVLKKCDELSKTQRWSKTDKSE---LV---LAELLCLDAG---ATKPKLTKCHEMG 747 (867)
Q Consensus 678 ~~i~~-~~sg~CLd~~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~~~---~~---~~s~~CLD~~---g~~v~~~~C~~~~ 747 (867)
++|.. ..+++||+.. .+|+.|++++|++ +.+|+|.|...+. .. ..++.|||+. |+.|++|+|+++
T Consensus 4 ~~i~t~~n~~k~l~~~---~n~~~v~~w~~~~-~~nQ~W~~~~~~~~~~y~i~~~~~~~~l~~~~~~g~~v~~~~~~~~- 78 (138)
T d1qxma2 4 CKLQTQLNSDRFLSKN---LNSQIIVLWQWFD-SSRQKWIIEYNETKSAYTLKCQENNRYLTWIQNSNNYVETYQSTDS- 78 (138)
T ss_dssp EEEEETTCTTCEEEEC---TTSSBEEEECCCC-CGGGCEEEEEETTTTEEEEEETTTTEEEEECCSTTCBEEEECCCSS-
T ss_pred eEEEEeeCCCEEEEEc---cCCceEEEECCCC-CcccCEEEEECCCcCEEEEEeCCCCCEEccccCCCcEEEEEcCCCC-
Confidence 44554 4789999983 3678999999999 8899999975322 22 3468999975 679999999986
Q ss_pred CCCeEEEecC----CeeeeecCC-CCceeecCCCCC--CCeEEEEecCCCCCceEEEecC
Q psy1765 748 GSQEWNFVLR----DKTPIYSPA-TGTCLGSKNRLE--NTVIVMEMCAQHKDTSWDLVPV 800 (867)
Q Consensus 748 ~~Q~W~~~~~----~~~~i~n~~-sg~CLd~~~~~~--g~~v~~~~C~~~~~Q~W~~~~~ 800 (867)
.+|+|.+... +.+.|++.. +++|||+.+.++ |+.|.+|+|+++++|+|.|+.+
T Consensus 79 ~~Q~W~i~~~~~~~g~y~i~~~~~s~~~Ldv~~~~~~nGt~v~~~~~~g~~nQ~W~l~~i 138 (138)
T d1qxma2 79 LIQYWNINYLDNDASKYILYNLQDTNRVLDVYNSQIANGTHVIVDSYHGNTNQQWIINLI 138 (138)
T ss_dssp GGGCEEEEEETTEEEEEEEEETTCTTEEEEEGGGCCSTTCBEEEEECCCSGGGCEEEEEC
T ss_pred hhcEEEEeccccCCCcEEEEEecCCCccEEECCCCcCCCCEEEEECCCCCccceEEEEEC
Confidence 4999998632 344588864 899999987654 9999999999999999999753
|
| >d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.45 E-value=1.9e-15 Score=163.33 Aligned_cols=60 Identities=45% Similarity=0.973 Sum_probs=58.1
Q ss_pred cccCceeEEEeecchhhhhhhccCcccCCCCccCCchhHhhhhhccccccccccccccCc
Q psy1765 452 NYTNSLRVAHVWMDEYIEHFLKQRPEARNIDYGDVTDRKQLRARLGCKSFKWYLDNVYPE 511 (867)
Q Consensus 452 ~~~N~~R~aeVWmDeyk~~~y~~~p~~~~~~~gdis~r~~LR~~l~CksF~Wyl~nv~p~ 511 (867)
..+|.+|+|||||||||++||..+|.+..+++|||++|++||++|+||||+|||+|||||
T Consensus 268 ~~~N~~r~~e~wl~~yk~~~~~~~~~~~~~~~~~i~~r~~Lr~~l~ck~f~w~~~~~~~~ 327 (328)
T d1xhba2 268 INKNNRRLAEVWMDEFKNFFYIISPGVTKVDYGDISSRLGLRRKLQCKPFSWYLENIYPD 327 (328)
T ss_dssp HHHHHHHHHHHHCGGGGHHHHHTSTTGGGSCCCCCHHHHHHHHHTTCCCHHHHHHHTCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcccccCCcccHHHHHHHHHHhCCCChHHHHhhCCCC
Confidence 467999999999999999999999999999999999999999999999999999999997
|
| >d1sr4a_ b.42.2.1 (A:) Cytolethal distending toxin subunit A {Haemophilus ducreyi [TaxId: 730]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Cytolethal distending toxin subunit A species: Haemophilus ducreyi [TaxId: 730]
Probab=99.44 E-value=2.1e-13 Score=132.07 Aligned_cols=123 Identities=15% Similarity=0.195 Sum_probs=92.8
Q ss_pred eEEEecCCCceEeecCCCCCCCceEEecCCC---CCCCccEEEcc---CCcEE---eccCceeeeCCCCcEEEecCCCCC
Q psy1765 678 FHIRLSGTDLCLTSKVDKTKGSPLVLKKCDE---LSKTQRWSKTD---KSELV---LAELLCLDAGATKPKLTKCHEMGG 748 (867)
Q Consensus 678 ~~i~~~~sg~CLd~~~~~~~g~~v~l~~C~~---~~~~Q~W~~~~---~~~~~---~~s~~CLD~~g~~v~~~~C~~~~~ 748 (867)
...+...+|.+|+. -....++-+..+++.. .+.+|+|++.. .+..+ ..+++|||+.|+.|++++|+.+..
T Consensus 21 ~~~i~~~~G~~l~~-w~~~~~~~lw~y~~~~s~~~g~~Q~W~~~~~~~~g~~~i~N~~sg~CLd~~g~~v~q~~C~~~~~ 99 (167)
T d1sr4a_ 21 FMTLMGQNGALLTV-WALAKRNWLWAYPNIYSQDFGNIRNWKMEPGKHREYFRFVNQSLGTCVEAYGNGLIHDICSLDKL 99 (167)
T ss_dssp CBEEEETTSEEEEE-CSCSTTCBEEEEEGGGCGGGGGGGCEEEEECSSTTCEEEEETTTCCEEEEETTEEEEECCCTTCG
T ss_pred eEEEeCCCCCEEEE-EecCCCcceeccccccccCCCccceEEEEecCCCCEEEEEECCCCcEEecCCCcEEEEecCCCCh
Confidence 34455678888887 2233455666665433 25689999964 33332 458999999999999999986666
Q ss_pred CCeEEEec--CCeeeeecCCCCceeecCCCCC--CCeEEEEecCCCCC----ceEEEecCC
Q psy1765 749 SQEWNFVL--RDKTPIYSPATGTCLGSKNRLE--NTVIVMEMCAQHKD----TSWDLVPVG 801 (867)
Q Consensus 749 ~Q~W~~~~--~~~~~i~n~~sg~CLd~~~~~~--g~~v~~~~C~~~~~----Q~W~~~~~~ 801 (867)
+|+|.+.. ++..+|+++++++|||+.+.++ |+.|.+++|+++.+ |+|.|.+.-
T Consensus 100 ~Q~W~~~~~~~G~~~i~n~~sg~CLdv~~~st~~G~~v~~~~C~~~~~~n~~QqW~i~pP~ 160 (167)
T d1sr4a_ 100 AQEFELLPTDSGAVVIKSVSQGRCVTYNPVSTTFYSTVTLSVCDGATEPSRDQTWYLAPPV 160 (167)
T ss_dssp GGCEEEEEBTTSCEEEEETTTCCEEEECSSCSSSCBCEEEECCCCCEETTEECCEEEECCS
T ss_pred HHeEEEEEecCceEEEEeccccEEEEecCCCCCCCCEEEEEecCCCCCCChhhcEEEeCCC
Confidence 89999874 5567799999999999987655 89999999998765 999998654
|
| >d1qxma1 b.42.2.1 (A:4-148) Hemagglutinin component Ha1 {Clostridium botulinum D phage [TaxId: 29342]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Hemagglutinin component Ha1 species: Clostridium botulinum D phage [TaxId: 29342]
Probab=99.44 E-value=2.3e-13 Score=129.00 Aligned_cols=113 Identities=12% Similarity=0.125 Sum_probs=89.2
Q ss_pred eEEEec-CCCceEeecCCCCCCCceEEecCCCCCCCccEEEcc--C-CcEE---eccCceeee---CCCCcEEEecCCCC
Q psy1765 678 FHIRLS-GTDLCLTSKVDKTKGSPLVLKKCDELSKTQRWSKTD--K-SELV---LAELLCLDA---GATKPKLTKCHEMG 747 (867)
Q Consensus 678 ~~i~~~-~sg~CLd~~~~~~~g~~v~l~~C~~~~~~Q~W~~~~--~-~~~~---~~s~~CLD~---~g~~v~~~~C~~~~ 747 (867)
+.|+.. .+++|||.. .++.|.+|+|++ +.+|+|.|.. . +..+ ..++.||++ .|+.|++|.|++.
T Consensus 12 y~i~~~~Ns~kvlD~~----s~t~Vq~w~~~g-~~nQkW~~~~~~~~g~Y~I~~~~s~~~l~~~~~~g~~v~~~~~~g~- 85 (145)
T d1qxma1 12 FFISPSNNTNKVLDKI----SQSEVKLWNKLS-GANQKWRLIYDTNKQAYKIKVMDNTSLILTWNAPLSSVSVKTDTNG- 85 (145)
T ss_dssp EEEEETTCTTEEEEEC----SSSCEEEEECCC-CGGGCEEEEEETTTTEEEEEESSSSCCEEEECTTSSCEEEECCCCC-
T ss_pred EEEEECCCCCeEEEec----CCCEEEEEcCCC-ChhheEEEEEcCCCCEEEEEECCCCCEEEeccCCCceEEEEcCCCC-
Confidence 567764 689999973 257899999999 8899999863 2 3222 346778886 4889999999985
Q ss_pred CCCeEEEe---cCCeeeeecC-CCCceeecCCCCCCCeEEEEecCCCCCceEEEec
Q psy1765 748 GSQEWNFV---LRDKTPIYSP-ATGTCLGSKNRLENTVIVMEMCAQHKDTSWDLVP 799 (867)
Q Consensus 748 ~~Q~W~~~---~~~~~~i~n~-~sg~CLd~~~~~~g~~v~~~~C~~~~~Q~W~~~~ 799 (867)
++|+|.+. .++.+.|++. ++++|||+.+ |+.|++|+|+++++|+|+|..
T Consensus 86 ~~Q~W~i~~~~~~g~y~I~n~~ns~~vLDv~g---g~~v~~~~~~g~~nQ~w~~~~ 138 (145)
T d1qxma1 86 DNQYWYLLQNYISRNVIIRNYMNPNLVLQYNI---DDTLMVSTQTSSSNQFFKFSN 138 (145)
T ss_dssp GGGCEEEEECTTTCCEEEEESSCTTEEEEECT---TSCEEEEECCSCGGGCEEEEE
T ss_pred chheEEEeecCCCCEEEEEEccCCCEEEEecC---CceEEEeCCCCCcccEEEEec
Confidence 59999884 3455668986 5899999987 456999999999999999974
|
| >d1dqga_ b.42.2.2 (A:) Mannose receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Cysteine rich domain domain: Mannose receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.43 E-value=1.7e-13 Score=128.29 Aligned_cols=114 Identities=17% Similarity=0.256 Sum_probs=85.5
Q ss_pred eEEEecCCCceEeecCCCCCCCceEEecCCCCCCCccEEEccCCcEE-eccCceeeeC----CCCcEEEecCCCCCCCeE
Q psy1765 678 FHIRLSGTDLCLTSKVDKTKGSPLVLKKCDELSKTQRWSKTDKSELV-LAELLCLDAG----ATKPKLTKCHEMGGSQEW 752 (867)
Q Consensus 678 ~~i~~~~sg~CLd~~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~~~~~-~~s~~CLD~~----g~~v~~~~C~~~~~~Q~W 752 (867)
..|+|..+++|||+.. +..|.+++|+++..+|.|.++..+.++ ..+++|||+. |++|++++|+.+..+|+|
T Consensus 5 f~I~n~~s~~CLd~~~----~~~v~l~~C~~~~~~Q~w~~~~~~~l~~~~s~~CL~~~~~~~g~~v~l~~Cd~~~~~Q~W 80 (134)
T d1dqga_ 5 FLIYNEDHKRCVDALS----AISVQTATCNPEAESQKFRWVSDSQIMSVAFKLCLGVPSKTDWASVTLYACDSKSEYQKW 80 (134)
T ss_dssp BCEEETTTTEEEEEEE----TTEEEEESCCTTCGGGCEEESSSSCEEETTTTEEEECSSSCTTCBCEEECCCTTCTTSCE
T ss_pred EEEEECCCCCCEECCC----CCEEEEEeccCCCcceEEEEcCCCceEecCCCcEEeEeeccCCceEEEEECCCCCcccee
Confidence 5799999999999832 457999999997889999999888776 4579999975 568999999987779999
Q ss_pred EEecCCeeeeecCCCCceeecCCCCCCCeEEEEecCCCCCceEEEec
Q psy1765 753 NFVLRDKTPIYSPATGTCLGSKNRLENTVIVMEMCAQHKDTSWDLVP 799 (867)
Q Consensus 753 ~~~~~~~~~i~n~~sg~CLd~~~~~~g~~v~~~~C~~~~~Q~W~~~~ 799 (867)
.+..+. . +......+||+.... .+..|++ .|.++.+|+|++-.
T Consensus 81 ~~~~~~-l-~~~~~~~l~l~~~~~-~~~~v~l-~~~~~~~q~W~~~g 123 (134)
T d1dqga_ 81 ECKNDT-L-FGIKGTELYFNYGNR-QEKNIKL-YKGSGLWSRWKVYG 123 (134)
T ss_dssp EECSTT-B-EEETTSSCEEECCGG-GCCSCEE-ESCCSGGGBCEETT
T ss_pred EeCCCe-E-EeecCcceEEeeccC-CCceEEE-ecCCcccccceEcC
Confidence 997433 2 444455677765433 2333454 55566789998843
|
| >d2ihoa1 b.42.2.1 (A:2-155) Agglutinin MOA, N-terminal domain {Fairy-ring mushroom (Marasmius oreades) [TaxId: 181124]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Agglutinin MOA, N-terminal domain species: Fairy-ring mushroom (Marasmius oreades) [TaxId: 181124]
Probab=99.41 E-value=2.3e-13 Score=130.57 Aligned_cols=125 Identities=16% Similarity=0.138 Sum_probs=90.9
Q ss_pred eeeecCCCceecccCCC-CCCCcEEEEecCCCC--CCceeeecCCC------ceE-EeeceeeecC------CCccEEEe
Q psy1765 549 HIRLSSTDLCLTSKVDK-TKGSPLVLKKCDELS--KTQHWSKTDKS------ELV-LAELLCLDAG------ATKPKLTK 612 (867)
Q Consensus 549 ~ir~~~~~~CLD~~~~~-~~g~~v~l~~C~~~~--~~Q~w~~t~~~------~i~-~~~~~CLd~~------g~~v~l~~ 612 (867)
.|++.++++|||+.++. ..|++|.+|+|++.. .+|+|.++..+ .|+ ..+++|||+. |..+.+|.
T Consensus 8 ~I~n~~s~~~ldv~~~~~~~G~~v~~w~~~~~~~~~nQ~W~~~~~~~~~~~y~i~n~~s~~~l~~~~~~~~~g~~v~~~~ 87 (154)
T d2ihoa1 8 HIENAGVPSAIDLKDGSSSDGTPIVGWQFTPDTINWHQLWLAEPIPNVADTFTLCNLFSGTYMDLYNGSSEAGTAVNGWQ 87 (154)
T ss_dssp EEEESSSSCEEEEGGGCCSTTEEEEEECCCTTSCCTTCEEEEEECTTSTTEEEEEETTTCCEEEEGGGCCSTTEEEEEEC
T ss_pred EEEECCCCCEEEeCCCCCCCCCEEEEEecCCCCCCcceEEEEEecCCcCceEEEEEcCCCeEEeccCCcCCCCcEEEEEe
Confidence 68888999999988754 579999999999764 58999997544 233 3468999976 33578899
Q ss_pred CCCC--CCCcceeeeeeeccceeeecccCcccccCCChhhhhhhhhccccCCCCCcccccccccccceEEEecCCCceEe
Q psy1765 613 CHEM--GGSQEYWCWLRCKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSGTDLCLT 690 (867)
Q Consensus 613 C~~~--~~~Q~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~~~~~~~~~i~~~~sg~CLd 690 (867)
|++. ..+|.| .+. ...--....|++..+++|||
T Consensus 88 ~~~~~~~~~Q~W-~~~--------------------------------------------~~~~g~~y~i~n~~sg~~Ld 122 (154)
T d2ihoa1 88 GTAFTTNPHQLW-TIK--------------------------------------------KSSDGTSYKIQNYGSKTFVD 122 (154)
T ss_dssp CCTTCCCGGGCE-EEE--------------------------------------------ECTTSSSEEEEETTTCCEEE
T ss_pred ecccCCCcccEE-EEc--------------------------------------------cCCCcceEEEEEcCCCcEEE
Confidence 9763 345654 222 10000125789999999999
Q ss_pred e-cCCCCCCCceEEecCC--CCCCCccEEEc
Q psy1765 691 S-KVDKTKGSPLVLKKCD--ELSKTQRWSKT 718 (867)
Q Consensus 691 ~-~~~~~~g~~v~l~~C~--~~~~~Q~W~~~ 718 (867)
+ ++...+|+.+.+++|. ..+++|+|.|+
T Consensus 123 v~~~~~~~gt~i~~w~~~~~~g~~~Q~W~f~ 153 (154)
T d2ihoa1 123 LVNGDSSDGAKIAGWTGTWDEGNPHQKWYFN 153 (154)
T ss_dssp EGGGCCSTTEEEEEECCCSSCCCGGGCEEEE
T ss_pred cCCCCcCCCcEEEEEecccCCCCccceEEEe
Confidence 8 5566788999999984 23788999986
|
| >d1dqga_ b.42.2.2 (A:) Mannose receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Cysteine rich domain domain: Mannose receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.40 E-value=7.8e-13 Score=123.74 Aligned_cols=76 Identities=24% Similarity=0.316 Sum_probs=54.9
Q ss_pred eEEEecCCCceEeecCCCCCCCceEEecCCCCCCCccEEEccCCcEEec-cCceeeeC---CCCcEEEecCCCCCCCeEE
Q psy1765 678 FHIRLSGTDLCLTSKVDKTKGSPLVLKKCDELSKTQRWSKTDKSELVLA-ELLCLDAG---ATKPKLTKCHEMGGSQEWN 753 (867)
Q Consensus 678 ~~i~~~~sg~CLd~~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~~~~~~~-s~~CLD~~---g~~v~~~~C~~~~~~Q~W~ 753 (867)
++|+|..+++||++. ....|..|++++|+..+++|+|.+.....+... ..+||++. +..|++..|++ .+|+|+
T Consensus 44 ~~l~~~~s~~CL~~~-~~~~g~~v~l~~Cd~~~~~Q~W~~~~~~l~~~~~~~l~l~~~~~~~~~v~l~~~~~--~~q~W~ 120 (134)
T d1dqga_ 44 SQIMSVAFKLCLGVP-SKTDWASVTLYACDSKSEYQKWECKNDTLFGIKGTELYFNYGNRQEKNIKLYKGSG--LWSRWK 120 (134)
T ss_dssp SCEEETTTTEEEECS-SSCTTCBCEEECCCTTCTTSCEEECSTTBEEETTSSCEEECCGGGCCSCEEESCCS--GGGBCE
T ss_pred CceEecCCCcEEeEe-eccCCceEEEEECCCCCccceeEeCCCeEEeecCcceEEeeccCCCceEEEecCCc--ccccce
Confidence 346677889999984 345688999999998688999999876655544 46677653 33566655543 479998
Q ss_pred Eec
Q psy1765 754 FVL 756 (867)
Q Consensus 754 ~~~ 756 (867)
+.+
T Consensus 121 ~~g 123 (134)
T d1dqga_ 121 VYG 123 (134)
T ss_dssp ETT
T ss_pred EcC
Confidence 763
|
| >d1qxma2 b.42.2.1 (A:149-286) Hemagglutinin component Ha1 {Clostridium botulinum D phage [TaxId: 29342]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Hemagglutinin component Ha1 species: Clostridium botulinum D phage [TaxId: 29342]
Probab=99.24 E-value=8.9e-12 Score=117.03 Aligned_cols=74 Identities=16% Similarity=0.145 Sum_probs=58.9
Q ss_pred eEEEecCCCceEeecCCCCCCCceEEecCCCCCCCccEEEccCC------cEEe--ccCceeeeC------CCCcEEEec
Q psy1765 678 FHIRLSGTDLCLTSKVDKTKGSPLVLKKCDELSKTQRWSKTDKS------ELVL--AELLCLDAG------ATKPKLTKC 743 (867)
Q Consensus 678 ~~i~~~~sg~CLd~~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~~------~~~~--~s~~CLD~~------g~~v~~~~C 743 (867)
+.|++..+++||+... .+|+.+.+++|++ +.+|+|.+.... .++. .+++|||+. |+.|++|+|
T Consensus 49 y~i~~~~~~~~l~~~~--~~g~~v~~~~~~~-~~~Q~W~i~~~~~~~g~y~i~~~~~s~~~Ldv~~~~~~nGt~v~~~~~ 125 (138)
T d1qxma2 49 YTLKCQENNRYLTWIQ--NSNNYVETYQSTD-SLIQYWNINYLDNDASKYILYNLQDTNRVLDVYNSQIANGTHVIVDSY 125 (138)
T ss_dssp EEEEETTTTEEEEECC--STTCBEEEECCCS-SGGGCEEEEEETTEEEEEEEEETTCTTEEEEEGGGCCSTTCBEEEEEC
T ss_pred EEEEeCCCCCEEcccc--CCCcEEEEEcCCC-ChhcEEEEeccccCCCcEEEEEecCCCccEEECCCCcCCCCEEEEECC
Confidence 4678889999999843 3578999999999 889999997532 2232 369999975 679999999
Q ss_pred CCCCCCCeEEEe
Q psy1765 744 HEMGGSQEWNFV 755 (867)
Q Consensus 744 ~~~~~~Q~W~~~ 755 (867)
+++ ++|+|.+.
T Consensus 126 ~g~-~nQ~W~l~ 136 (138)
T d1qxma2 126 HGN-TNQQWIIN 136 (138)
T ss_dssp CCS-GGGCEEEE
T ss_pred CCC-ccceEEEE
Confidence 985 59999986
|
| >d1upsa2 b.42.2.3 (A:290-420) GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, C-terminal domain {Clostridium perfringens [TaxId: 1502]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, C-terminal domain domain: GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, C-terminal domain species: Clostridium perfringens [TaxId: 1502]
Probab=99.23 E-value=1.2e-11 Score=114.66 Aligned_cols=120 Identities=15% Similarity=0.111 Sum_probs=93.6
Q ss_pred eEEEecCCCceEeecCCCCCCCceEEecCCCCCCCccEEEccC-CcE---EeccCceeeeC---CCCcEEEecCCCCCCC
Q psy1765 678 FHIRLSGTDLCLTSKVDKTKGSPLVLKKCDELSKTQRWSKTDK-SEL---VLAELLCLDAG---ATKPKLTKCHEMGGSQ 750 (867)
Q Consensus 678 ~~i~~~~sg~CLd~~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~-~~~---~~~s~~CLD~~---g~~v~~~~C~~~~~~Q 750 (867)
+.|+|+.||+||++.+ ...+..+..++|++ ..+|+|.|... +.. ...+++|||+. |+.+.++++++. .+|
T Consensus 3 Y~I~N~~sGk~L~v~~-~~~~~~~~~~~~~~-~~~qqW~~~~~~g~y~i~n~~sg~~l~~~~~sg~~~~~~~~~~~-~~q 79 (131)
T d1upsa2 3 YLIRNRQTGKFLYIEE-NNDKVSYGDITLKN-EKNAKWSKEYRDGYTLLKNNETGEYLNIENQTGYIEHGKVPKTW-WSA 79 (131)
T ss_dssp EEEEETTTCCEEECCT-TCSSCEEECCCTTT-TGGGCEEEEEETTEEEEEETTTCCEEECTTCCSBCEEECCCTTC-GGG
T ss_pred EEEEEccCCcEEEEeC-CCCcEEEeccccCC-CcccEEEEEeCCCEEEEEECCCCcEEEccCCCCceEEEccCCCC-hhH
Confidence 6799999999999743 33456677889987 78899999853 322 25589999987 557889999875 489
Q ss_pred eEEEec-CCeeeeecC-CCCceeecCCCCCCCeEEEEecCCCCCceEEEecCC
Q psy1765 751 EWNFVL-RDKTPIYSP-ATGTCLGSKNRLENTVIVMEMCAQHKDTSWDLVPVG 801 (867)
Q Consensus 751 ~W~~~~-~~~~~i~n~-~sg~CLd~~~~~~g~~v~~~~C~~~~~Q~W~~~~~~ 801 (867)
+|.+.. ++..+|++. .+++||++.+. +|+.+..+.+++..+|+|+|+|+.
T Consensus 80 qW~l~~~gg~~~i~n~~~s~~~L~v~~~-sG~~~~~~~~~~~~~qqW~l~pVe 131 (131)
T d1upsa2 80 QWSEVPVDGYTRFVNRWKPNMSIHTESY-EGVLQYGNVPNTYWTSQWQLIPVE 131 (131)
T ss_dssp CEEEEEETTEEEEEESSSTTCEEECTTC-CSBCEEECCCTTCGGGCEEEEEEC
T ss_pred eEEEEecCCcEEEEEeccCCeEEEEecC-CcceeeeeccCCCcCccEEEEEcC
Confidence 999874 355567776 68999999874 466778889999999999999863
|
| >d1qxma1 b.42.2.1 (A:4-148) Hemagglutinin component Ha1 {Clostridium botulinum D phage [TaxId: 29342]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Hemagglutinin component Ha1 species: Clostridium botulinum D phage [TaxId: 29342]
Probab=99.18 E-value=5.2e-11 Score=112.47 Aligned_cols=111 Identities=13% Similarity=0.081 Sum_probs=81.9
Q ss_pred eeceeeecC-CCccEEEeCCCCCCCcceeeeeeeccceeeecccCcccccCCChhhhhhhhhccccCCCCCccccccccc
Q psy1765 596 AELLCLDAG-ATKPKLTKCHEMGGSQEYWCWLRCKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNY 674 (867)
Q Consensus 596 ~~~~CLd~~-g~~v~l~~C~~~~~~Q~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~~~~ 674 (867)
++++|||.. ++.|++|.|++. .+|+| .+.+..+
T Consensus 19 Ns~kvlD~~s~t~Vq~w~~~g~-~nQkW-~~~~~~~-------------------------------------------- 52 (145)
T d1qxma1 19 NTNKVLDKISQSEVKLWNKLSG-ANQKW-RLIYDTN-------------------------------------------- 52 (145)
T ss_dssp CTTEEEEECSSSCEEEEECCCC-GGGCE-EEEEETT--------------------------------------------
T ss_pred CCCeEEEecCCCEEEEEcCCCC-hhheE-EEEEcCC--------------------------------------------
Confidence 467999965 678999999984 46664 3321110
Q ss_pred ccceEEEecCCCceEeecCCCCCCCceEEecCCCCCCCccEEEcc---CCc--EEe--ccCceeeeC-CCCcEEEecCCC
Q psy1765 675 TSHFHIRLSGTDLCLTSKVDKTKGSPLVLKKCDELSKTQRWSKTD---KSE--LVL--AELLCLDAG-ATKPKLTKCHEM 746 (867)
Q Consensus 675 ~~~~~i~~~~sg~CLd~~~~~~~g~~v~l~~C~~~~~~Q~W~~~~---~~~--~~~--~s~~CLD~~-g~~v~~~~C~~~ 746 (867)
...+.|++..+++|+++.. .+|+.+++++|++ .++|+|.+.. .+. ++. ++++|||+. |+.|++|+|+++
T Consensus 53 ~g~Y~I~~~~s~~~l~~~~--~~g~~v~~~~~~g-~~~Q~W~i~~~~~~g~y~I~n~~ns~~vLDv~gg~~v~~~~~~g~ 129 (145)
T d1qxma1 53 KQAYKIKVMDNTSLILTWN--APLSSVSVKTDTN-GDNQYWYLLQNYISRNVIIRNYMNPNLVLQYNIDDTLMVSTQTSS 129 (145)
T ss_dssp TTEEEEEESSSSCCEEEEC--TTSSCEEEECCCC-CGGGCEEEEECTTTCCEEEEESSCTTEEEEECTTSCEEEEECCSC
T ss_pred CCEEEEEECCCCCEEEecc--CCCceEEEEcCCC-CchheEEEeecCCCCEEEEEEccCCCEEEEecCCceEEEeCCCCC
Confidence 0126789999999998732 3578899999999 8999998853 222 332 369999998 559999999986
Q ss_pred CCCCeEEEec
Q psy1765 747 GGSQEWNFVL 756 (867)
Q Consensus 747 ~~~Q~W~~~~ 756 (867)
. +|+|+|..
T Consensus 130 ~-nQ~w~~~~ 138 (145)
T d1qxma1 130 S-NQFFKFSN 138 (145)
T ss_dssp G-GGCEEEEE
T ss_pred c-ccEEEEec
Confidence 4 99999973
|
| >d1pzta_ c.68.1.2 (A:) beta 1,4 galactosyltransferase (b4GalT1) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: beta 1,4 galactosyltransferase (b4GalT1) domain: beta 1,4 galactosyltransferase (b4GalT1) species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.10 E-value=5.4e-10 Score=115.35 Aligned_cols=50 Identities=24% Similarity=0.274 Sum_probs=45.6
Q ss_pred ccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHHHHcCCeEEEEcc
Q psy1765 290 TMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRIWMCGGSLAMIPC 339 (867)
Q Consensus 290 ~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl~~~G~~i~~~P~ 339 (867)
...||+++++++.|++|+||++.|..||+||.||..|+..+|.+|...+.
T Consensus 157 ~~~GGv~~~~k~~f~kINGfsN~ywGWGgEDddl~~R~~~~g~~i~R~~~ 206 (271)
T d1pzta_ 157 QYFGGVSALSKQQFLSINGFPNNYWGAGGEDDDIYNRLAFRGMSVSRPNA 206 (271)
T ss_dssp TCCCSEEEEEHHHHHHTTSCCSCCCSSSSHHHHHHHHHHHTTCCCBCCCT
T ss_pred cccceeeeecHHHHhhcCCCCccccCCccccHHHHHHHHHcCCeEEccCC
Confidence 45689999999999999999999999999999999999999999876443
|
| >d1sr4a_ b.42.2.1 (A:) Cytolethal distending toxin subunit A {Haemophilus ducreyi [TaxId: 730]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Cytolethal distending toxin subunit A species: Haemophilus ducreyi [TaxId: 730]
Probab=98.98 E-value=6.1e-10 Score=107.34 Aligned_cols=120 Identities=18% Similarity=0.177 Sum_probs=82.4
Q ss_pred CCCceecccCCCCCCCcEEEEecCC---CCCCceeeecC---CCceE---EeeceeeecCCCccEEEeCCCCCCCcceee
Q psy1765 554 STDLCLTSKVDKTKGSPLVLKKCDE---LSKTQHWSKTD---KSELV---LAELLCLDAGATKPKLTKCHEMGGSQEYWC 624 (867)
Q Consensus 554 ~~~~CLD~~~~~~~g~~v~l~~C~~---~~~~Q~w~~t~---~~~i~---~~~~~CLd~~g~~v~l~~C~~~~~~Q~~w~ 624 (867)
.+|.+|+.-. ...+..+..|+++. .+.+|+|++.. ++..+ ..+++|||+.++.++.++|+....+|+| .
T Consensus 27 ~~G~~l~~w~-~~~~~~lw~y~~~~s~~~g~~Q~W~~~~~~~~g~~~i~N~~sg~CLd~~g~~v~q~~C~~~~~~Q~W-~ 104 (167)
T d1sr4a_ 27 QNGALLTVWA-LAKRNWLWAYPNIYSQDFGNIRNWKMEPGKHREYFRFVNQSLGTCVEAYGNGLIHDICSLDKLAQEF-E 104 (167)
T ss_dssp TTSEEEEECS-CSTTCBEEEEEGGGCGGGGGGGCEEEEECSSTTCEEEEETTTCCEEEEETTEEEEECCCTTCGGGCE-E
T ss_pred CCCCEEEEEe-cCCCcceeccccccccCCCccceEEEEecCCCCEEEEEECCCCcEEecCCCcEEEEecCCCChHHeE-E
Confidence 4556666532 23455555555432 34689999853 44443 3579999999999999999977777775 4
Q ss_pred eeeeccceeeecccCcccccCCChhhhhhhhhccccCCCCCcccccccccccceEEEecCCCceEee-cCCCCCCCceEE
Q psy1765 625 WLRCKSFKWYLDNVYPEMILPSDDEDRLKKKWAQVEQPKFQPWYSRARNYTSHFHIRLSGTDLCLTS-KVDKTKGSPLVL 703 (867)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~W~~~~~~~~~~~~i~~~~sg~CLd~-~~~~~~g~~v~l 703 (867)
+.+.. ....+|++..+++|||+ ..+...|+.|.+
T Consensus 105 ~~~~~---------------------------------------------~G~~~i~n~~sg~CLdv~~~st~~G~~v~~ 139 (167)
T d1sr4a_ 105 LLPTD---------------------------------------------SGAVVIKSVSQGRCVTYNPVSTTFYSTVTL 139 (167)
T ss_dssp EEEBT---------------------------------------------TSCEEEEETTTCCEEEECSSCSSSCBCEEE
T ss_pred EEEec---------------------------------------------CceEEEEeccccEEEEecCCCCCCCCEEEE
Confidence 32111 11368999999999999 456677889999
Q ss_pred ecCCCCC---CCccEEEccC
Q psy1765 704 KKCDELS---KTQRWSKTDK 720 (867)
Q Consensus 704 ~~C~~~~---~~Q~W~~~~~ 720 (867)
++|++.. .+|+|.+...
T Consensus 140 ~~C~~~~~~n~~QqW~i~pP 159 (167)
T d1sr4a_ 140 SVCDGATEPSRDQTWYLAPP 159 (167)
T ss_dssp ECCCCCEETTEECCEEEECC
T ss_pred EecCCCCCCChhhcEEEeCC
Confidence 9998732 2399999753
|
| >d1upsa2 b.42.2.3 (A:290-420) GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, C-terminal domain {Clostridium perfringens [TaxId: 1502]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, C-terminal domain domain: GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, C-terminal domain species: Clostridium perfringens [TaxId: 1502]
Probab=98.65 E-value=2.9e-08 Score=91.51 Aligned_cols=75 Identities=9% Similarity=0.031 Sum_probs=57.4
Q ss_pred eEEEecCCCceEeecCCCCCCCceEEecCCCCCCCccEEEccCCc-EE----eccCceeeeC---CCCcEEEecCCCCCC
Q psy1765 678 FHIRLSGTDLCLTSKVDKTKGSPLVLKKCDELSKTQRWSKTDKSE-LV----LAELLCLDAG---ATKPKLTKCHEMGGS 749 (867)
Q Consensus 678 ~~i~~~~sg~CLd~~~~~~~g~~v~l~~C~~~~~~Q~W~~~~~~~-~~----~~s~~CLD~~---g~~v~~~~C~~~~~~ 749 (867)
.+|+|..||+||++... .|..+..+++++ ..+|+|.+...+- .+ ..+++|||+. |+.+..+.+.+. .+
T Consensus 47 y~i~n~~sg~~l~~~~~--sg~~~~~~~~~~-~~~qqW~l~~~gg~~~i~n~~~s~~~L~v~~~sG~~~~~~~~~~~-~~ 122 (131)
T d1upsa2 47 TLLKNNETGEYLNIENQ--TGYIEHGKVPKT-WWSAQWSEVPVDGYTRFVNRWKPNMSIHTESYEGVLQYGNVPNTY-WT 122 (131)
T ss_dssp EEEEETTTCCEEECTTC--CSBCEEECCCTT-CGGGCEEEEEETTEEEEEESSSTTCEEECTTCCSBCEEECCCTTC-GG
T ss_pred EEEEECCCCcEEEccCC--CCceEEEccCCC-ChhHeEEEEecCCcEEEEEeccCCeEEEEecCCcceeeeeccCCC-cC
Confidence 57999999999998432 377888999988 7899999986332 21 2369999986 557778888775 48
Q ss_pred CeEEEec
Q psy1765 750 QEWNFVL 756 (867)
Q Consensus 750 Q~W~~~~ 756 (867)
|+|.|.+
T Consensus 123 qqW~l~p 129 (131)
T d1upsa2 123 SQWQLIP 129 (131)
T ss_dssp GCEEEEE
T ss_pred ccEEEEE
Confidence 9999863
|
| >d1fo8a_ c.68.1.10 (A:) N-acetylglucosaminyltransferase I {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: N-acetylglucosaminyltransferase I domain: N-acetylglucosaminyltransferase I species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=97.73 E-value=0.00021 Score=74.90 Aligned_cols=202 Identities=14% Similarity=0.085 Sum_probs=110.8
Q ss_pred CCcEEEEEEeCCCChHHHHHHHHHHHhcCccccccEEEEEECCCCCCCCchhhHHHHHhhcCCCceEEEEeccchhhHHH
Q psy1765 51 LPSTSVIICFYNEHPATLYRSVQTLLSRTGQSLLHEIILVNDFSEYPSNLHGEVETFVKGLNDGRVHLYRTSKREGLIRA 130 (867)
Q Consensus 51 ~P~vSVIIp~yNe~~~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~a 130 (867)
||.|-|+|.+||.+ .|.+||+||++..+..-..+|+|.-||+.++ .+..++...+. +.+++.
T Consensus 1 ~~viPVlv~a~NRP--~l~r~LesLlk~~p~~~~~~I~Vs~DG~~~~------~~~~v~~~~~~-v~~I~~--------- 62 (343)
T d1fo8a_ 1 LAVIPILVIACDRS--TVRRCLDKLLHYRPSAELFPIIVSQDCGHEE------TAQVIASYGSA-VTHIRQ--------- 62 (343)
T ss_dssp CCCCCEEEEESSCT--THHHHHHHHHHHCSCTTTSCEEEEECTTCHH------HHHHHHTTGGG-SEEEEC---------
T ss_pred CCcccEEEEEcCHH--HHHHHHHHHHhcCccccCccEEEEecCCchh------HHHHHHHHHHH-HHHhcC---------
Confidence 46678999999974 5899999999876543333799999998654 12222211111 100000
Q ss_pred hhhhhhhhccccccccceeEEEEEeCCCCCCcCchHHHHHHHhhcCCCCEE--EEEcCCCcCc----hhHHhHhhhhcCC
Q psy1765 131 RMFGAKYATGKNRIQSLLHEIILVNDFSEYPSNLHGEVESFVKGLNNGRVH--LYRTSKREGL----IRARMFGAKYATG 204 (867)
Q Consensus 131 ~~~g~~~a~g~~~~~~~l~EIIVVDn~Std~~~~~~~l~~~~~~~~~~~vr--ii~~~~n~G~----a~ArN~G~~~A~G 204 (867)
.+.+.. .+. ......|.|+ ..|.|..+.....
T Consensus 63 ------------------------~~~~~~------------------~~~~~~~k~~~n~giarhy~~AL~~~F~~~~~ 100 (343)
T d1fo8a_ 63 ------------------------PDLSNI------------------AVQPDHRKFQGYYKIARHYRWALGQIFHNFNY 100 (343)
T ss_dssp ------------------------SCCCCC------------------CCCTTCGGGHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred ------------------------Cccccc------------------eecchhhcccchhHHHHHHHHHHHHHhcccCC
Confidence 000000 000 0001113333 3445555555457
Q ss_pred CEEEEEcCCcccCccch---HHHHHHHHhcCCc-eeeeEEeeecCCCceeccccccccccccccccccccCCcCcCCCCC
Q psy1765 205 KVLVFLDSHIEVNTHWL---EPLLVPIAERTNT-VTVPIIDIINADTFQYTSSALVRGGFNWGLHFKWENLPKGTLNSSE 280 (867)
Q Consensus 205 d~llfLDaD~~v~p~wL---e~Ll~~l~~~~~~-vv~p~i~~i~~~~~~~~~~~~~~g~f~~~l~~~~~~~~~~~~~~~~ 280 (867)
+.+++|..|+++.|+++ +.++..++.++.. +|++.. ..+.. ......
T Consensus 101 ~~~IiLEDDl~~spdFf~y~~~~l~~~~~D~~i~~IS~wN----dnG~~-------------------------~~~~~~ 151 (343)
T d1fo8a_ 101 PAAVVVEDDLEVAPDFFEYFQATYPLLKADPSLWCVSAWN----DNGKE-------------------------QMVDSS 151 (343)
T ss_dssp SEEEEEETTEEECTTHHHHHHHHHHHHHHCTTEEEEESCC----TTCBG-------------------------GGSCTT
T ss_pred ceEEEEecCceeeHHHHHHHHHHHHHHhcCCCEEEEeccc----cCCCc-------------------------ccccCC
Confidence 99999999999999988 5666666666653 333211 00000 000011
Q ss_pred CCCCcccccccccceEeEeHHHHHHhCCCCCCCCCCcccchHHHHHH-HHcCCeEEEEcc-cEEEEEec
Q psy1765 281 DFIKPILSPTMAGGLFAIDRQYFDSLGQYDAGLEIWGGENLELSFRI-WMCGGSLAMIPC-SRIGHVFR 347 (867)
Q Consensus 281 ~~~~p~~~~~~~G~~~airR~~f~~vGgfDe~~~~~G~ED~Dls~Rl-~~~G~~i~~~P~-s~V~H~~r 347 (867)
.+...+++..+.|-..|+.|+.|+++.. -|...+.|..+|. -+.-++..+.|+ +|+.|..+
T Consensus 152 ~~~~lyrs~~fpg~GW~~~r~~W~el~~------kwp~~~Wd~w~r~~~~rkgr~cI~PevsRt~~fG~ 214 (343)
T d1fo8a_ 152 KPELLYRTDFFPGLGWLLLAELWAELEP------KWPKAFWDDWMRRPEQRKGRACVRPEISRTMTFGR 214 (343)
T ss_dssp CTTCEEEESSCCCSSEEEEHHHHHHHGG------GCCSSCHHHHHTSHHHHTTCEEEEESSBSEEECC-
T ss_pred CCceEEeecCCCchhhheeHHHHHHhhh------cCCCCCcHHhhhhHHhcCCCeeeccCccceeeecc
Confidence 1112235566666778999999998752 2434567777773 334455555664 57777653
|
| >d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: MGS-like domain: Mannosylglycerate synthase, MGS species: Rhodothermus marinus [TaxId: 29549]
Probab=90.85 E-value=0.00067 Score=72.35 Aligned_cols=89 Identities=11% Similarity=0.022 Sum_probs=69.3
Q ss_pred cccCceeEEEeecchhhhhhhccCcccCCCCccCCchhHhhhhhccccccccccccccCccccCCCcHHHHhhhhhcccC
Q psy1765 452 NYTNSLRVAHVWMDEYIEHFLKQRPEARNIDYGDVTDRKQLRARLGCKSFKWYLDNVYPEMILPSDDEERLKKKWAQVEQ 531 (867)
Q Consensus 452 ~~~N~~R~aeVWmDeyk~~~y~~~p~~~~~~~gdis~r~~LR~~l~CksF~Wyl~nv~p~~~~p~~~~~~~~~~~~~~~~ 531 (867)
++.|+++.+-+||++|++++.+..++. .+++|.++.++. .++|.++.||.++||+.+..-.. .|+.++.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 337 (381)
T d2bo4a1 269 DVEATLHRLMQHWTPRQVELLELFTTP---VREGLRTCQRRP-AFNFMDEMAWAATYHVLLEHFQP-------GDPDWEE 337 (381)
T ss_dssp CHHHHHHHHTSSCCHHHHHHGGGSCHH---HHHHHHHTTTSC-CCTTCCHHHHHHHHHHHHHHCCT-------TCHHHHH
T ss_pred CHHHHHHHHHHhhHHHHHHHHHhcCHH---HHHHHHHhcccc-cCCCCcHHHHHHHHHHHHHHhhc-------cchhHHH
Confidence 678899999999999999988876644 489999999986 59999999999999998764322 2334444
Q ss_pred CCcccccccccccccceeee
Q psy1765 532 PKFQPWYSRARNYTSHFHIR 551 (867)
Q Consensus 532 ~~~~~~~g~~rn~~~~g~ir 551 (867)
..++.|+||++|+.....+|
T Consensus 338 ~~~~~~~~r~~~~~~~~~~~ 357 (381)
T d2bo4a1 338 LLFKLWTTRVLNYTMTVALR 357 (381)
T ss_dssp HHHHHHHHHHHHHHHHTGGG
T ss_pred HhhhhHHHHHHHHHHHHHHh
Confidence 46788999999986554443
|
| >d1v82a_ c.68.1.7 (A:) Beta-1,3-glucuronyltransferase 1, GlcAT-P {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: 1,3-glucuronyltransferase domain: Beta-1,3-glucuronyltransferase 1, GlcAT-P species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.61 E-value=3.6 Score=39.85 Aligned_cols=43 Identities=30% Similarity=0.386 Sum_probs=30.7
Q ss_pred CCcEEEEEEeCCCCh--HHHHHHHHHHHhcCccccccEEEEEECCCCCC
Q psy1765 51 LPSTSVIICFYNEHP--ATLYRSVQTLLSRTGQSLLHEIILVNDFSEYP 97 (867)
Q Consensus 51 ~P~vSVIIp~yNe~~--~~l~~~l~Svl~qt~~~~~~EiIlVDd~S~d~ 97 (867)
+|.|-||.|+|-... ..|-+..++|+.- +++ -.|||+|+....
T Consensus 1 lp~I~vVTPTy~R~~Q~~~LtRLa~TL~lV--p~l--~WIVVEda~~~t 45 (252)
T d1v82a_ 1 LPTIHVVTPTYSRPVQKAELTRMANTLLHV--PNL--HWLVVEDAPRRT 45 (252)
T ss_dssp CCEEEEEEEECCSTTHHHHHHHHHHHHTTC--SSE--EEEEEESSSSCC
T ss_pred CCCEEEECCCCCchhhHHHHHHHHhHHhcC--CCc--eEEEEeCCCCCC
Confidence 689999999998543 3566777776433 456 789999876543
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